Query 004977
Match_columns 721
No_of_seqs 470 out of 2620
Neff 9.6
Searched_HMMs 46136
Date Thu Mar 28 16:02:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004977.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/004977hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1180 Acyl-CoA synthetase [L 100.0 1E-120 3E-125 923.8 56.9 654 58-721 20-676 (678)
2 KOG1256 Long-chain acyl-CoA sy 100.0 1E-104 2E-109 848.3 55.5 623 58-721 53-687 (691)
3 PLN02387 long-chain-fatty-acid 100.0 4E-100 9E-105 879.0 71.5 670 51-721 27-696 (696)
4 PLN02614 long-chain acyl-CoA s 100.0 7.8E-93 1.7E-97 814.7 66.7 624 58-721 25-656 (666)
5 PTZ00342 acyl-CoA synthetase; 100.0 1.3E-91 2.8E-96 801.8 64.0 613 58-721 43-744 (746)
6 PLN02736 long-chain acyl-CoA s 100.0 4.5E-91 9.7E-96 802.5 66.7 607 78-721 40-648 (651)
7 PLN02861 long-chain-fatty-acid 100.0 1.3E-90 2.7E-95 797.2 65.9 622 58-721 23-653 (660)
8 COG1022 FAA1 Long-chain acyl-C 100.0 5.3E-91 1.2E-95 757.2 53.9 585 80-721 14-608 (613)
9 PLN02430 long-chain-fatty-acid 100.0 3.9E-89 8.6E-94 783.2 66.1 624 58-721 22-653 (660)
10 PTZ00216 acyl-CoA synthetase; 100.0 1.5E-88 3.2E-93 785.2 67.3 620 77-721 64-698 (700)
11 KOG1177 Long chain fatty acid 100.0 6.6E-81 1.4E-85 624.2 38.6 511 81-717 49-590 (596)
12 KOG1176 Acyl-CoA synthetase [L 100.0 1.9E-80 4.2E-85 670.1 40.5 477 130-715 45-533 (537)
13 COG0318 CaiC Acyl-CoA syntheta 100.0 3.9E-76 8.4E-81 660.5 47.6 509 80-714 9-527 (534)
14 COG0365 Acs Acyl-coenzyme A sy 100.0 5.4E-76 1.2E-80 631.7 41.6 497 87-714 14-522 (528)
15 PRK08180 feruloyl-CoA synthase 100.0 4E-74 8.7E-79 657.8 54.6 542 81-721 38-603 (614)
16 PRK12582 acyl-CoA synthetase; 100.0 2.6E-73 5.6E-78 652.4 56.1 544 79-721 46-614 (624)
17 PTZ00297 pantothenate kinase; 100.0 6.4E-72 1.4E-76 661.7 59.1 565 77-721 422-1002(1452)
18 PLN02860 o-succinylbenzoate-Co 100.0 4E-72 8.7E-77 635.9 48.4 525 81-719 6-559 (563)
19 PTZ00237 acetyl-CoA synthetase 100.0 3.6E-72 7.8E-77 642.9 47.6 538 81-713 58-622 (647)
20 PRK07529 AMP-binding domain pr 100.0 3.1E-71 6.7E-76 635.1 50.5 531 81-716 24-572 (632)
21 PRK06334 long chain fatty acid 100.0 2.9E-71 6.3E-76 624.3 47.1 499 81-715 18-536 (539)
22 PLN02654 acetate-CoA ligase 100.0 2.8E-71 6E-76 637.7 47.2 527 82-714 88-640 (666)
23 PRK07788 acyl-CoA synthetase; 100.0 3.9E-71 8.3E-76 626.8 45.2 493 82-711 49-548 (549)
24 TIGR02188 Ac_CoA_lig_AcsA acet 100.0 7.2E-71 1.6E-75 633.5 47.8 524 82-714 57-602 (625)
25 TIGR02316 propion_prpE propion 100.0 1.2E-70 2.7E-75 630.7 47.6 529 82-713 52-603 (628)
26 PRK00174 acetyl-CoA synthetase 100.0 3.9E-70 8.5E-75 628.4 49.0 521 83-714 68-610 (637)
27 COG1021 EntE Peptide arylation 100.0 7.4E-72 1.6E-76 546.4 27.6 496 81-715 27-539 (542)
28 PRK04319 acetyl-CoA synthetase 100.0 5.6E-69 1.2E-73 611.4 44.1 509 81-713 42-558 (570)
29 PRK10524 prpE propionyl-CoA sy 100.0 1.6E-68 3.5E-73 614.5 47.4 530 82-713 53-604 (629)
30 PRK13295 cyclohexanecarboxylat 100.0 3.9E-68 8.5E-73 601.7 49.7 501 81-714 23-544 (547)
31 PRK12467 peptide synthase; Pro 100.0 2.2E-70 4.7E-75 725.6 35.1 520 43-712 3062-3592(3956)
32 PRK05677 long-chain-fatty-acid 100.0 3.2E-68 6.9E-73 604.2 48.0 515 81-715 23-558 (562)
33 TIGR01217 ac_ac_CoA_syn acetoa 100.0 2.6E-68 5.7E-73 612.0 47.1 510 94-713 96-625 (652)
34 PRK05857 acyl-CoA synthetase; 100.0 1.2E-68 2.7E-73 604.2 42.6 506 81-717 13-534 (540)
35 TIGR03443 alpha_am_amid L-amin 100.0 6.5E-69 1.4E-73 669.6 43.3 577 43-717 204-831 (1389)
36 PRK03584 acetoacetyl-CoA synth 100.0 6.7E-68 1.4E-72 611.5 48.3 518 83-713 87-624 (655)
37 PRK08314 long-chain-fatty-acid 100.0 9.1E-68 2E-72 599.5 48.2 518 81-715 9-543 (546)
38 PRK13382 acyl-CoA synthetase; 100.0 4.6E-68 1E-72 599.1 44.5 487 82-710 43-536 (537)
39 PLN02246 4-coumarate--CoA liga 100.0 1.5E-67 3.4E-72 595.7 48.4 506 76-714 17-536 (537)
40 PRK06060 acyl-CoA synthetase; 100.0 2.6E-68 5.6E-73 619.6 42.8 479 82-713 4-491 (705)
41 PRK07769 long-chain-fatty-acid 100.0 3.8E-68 8.2E-73 611.3 43.3 514 79-714 18-614 (631)
42 PRK09274 peptide synthase; Pro 100.0 1.4E-67 3.1E-72 598.3 46.7 522 82-716 6-550 (552)
43 PLN02574 4-coumarate--CoA liga 100.0 7.4E-68 1.6E-72 600.6 42.7 500 85-715 44-555 (560)
44 PRK05852 acyl-CoA synthetase; 100.0 1.5E-67 3.2E-72 595.4 44.0 508 79-714 13-532 (534)
45 PRK12467 peptide synthase; Pro 100.0 1.6E-68 3.4E-73 707.9 42.1 569 6-715 1491-2086(3956)
46 PRK08043 bifunctional acyl-[ac 100.0 1.3E-67 2.9E-72 613.9 44.0 492 80-714 202-713 (718)
47 PRK05691 peptide synthase; Val 100.0 1.2E-68 2.7E-73 715.3 38.6 527 43-711 3687-4225(4334)
48 PLN03102 acyl-activating enzym 100.0 1.1E-66 2.3E-71 592.3 48.5 517 82-716 14-556 (579)
49 PRK10252 entF enterobactin syn 100.0 3.1E-68 6.7E-73 661.4 38.5 519 43-710 427-963 (1296)
50 PRK06155 crotonobetaine/carnit 100.0 1.1E-66 2.3E-71 588.4 46.9 498 80-712 19-522 (542)
51 PRK07638 acyl-CoA synthetase; 100.0 8.8E-67 1.9E-71 582.7 45.4 481 82-720 1-486 (487)
52 PRK12316 peptide synthase; Pro 100.0 3.8E-68 8.3E-73 715.1 40.3 523 43-713 478-1005(5163)
53 PRK12316 peptide synthase; Pro 100.0 2.6E-68 5.7E-73 716.7 37.9 538 43-720 4518-5066(5163)
54 PRK06839 acyl-CoA synthetase; 100.0 9.8E-67 2.1E-71 584.3 44.5 487 82-714 2-495 (496)
55 PRK12476 putative fatty-acid-- 100.0 9E-67 1.9E-71 597.3 43.7 514 77-714 29-606 (612)
56 PLN03052 acetate--CoA ligase; 100.0 4.6E-66 1E-70 595.6 49.3 522 85-717 178-724 (728)
57 PRK07470 acyl-CoA synthetase; 100.0 2.5E-66 5.5E-71 585.0 45.5 501 81-714 6-518 (528)
58 PRK03640 O-succinylbenzoic aci 100.0 3.1E-66 6.7E-71 578.1 45.3 477 81-714 1-482 (483)
59 PRK05620 long-chain-fatty-acid 100.0 5.9E-66 1.3E-70 587.4 48.3 520 82-714 10-557 (576)
60 TIGR02275 DHB_AMP_lig 2,3-dihy 100.0 4.1E-66 9E-71 582.7 46.4 494 81-709 22-527 (527)
61 TIGR03208 cyc_hxne_CoA_lg cycl 100.0 6.2E-66 1.3E-70 582.8 47.4 495 82-709 22-537 (538)
62 PRK05605 long-chain-fatty-acid 100.0 6.1E-66 1.3E-70 587.4 46.6 516 82-717 32-572 (573)
63 PRK07008 long-chain-fatty-acid 100.0 8.6E-66 1.9E-70 581.2 47.2 509 82-715 10-534 (539)
64 PRK07786 long-chain-fatty-acid 100.0 1.5E-65 3.2E-70 580.0 48.6 505 80-716 15-526 (542)
65 PRK08008 caiC putative crotono 100.0 5.4E-66 1.2E-70 581.0 44.5 503 81-709 6-517 (517)
66 PRK07656 long-chain-fatty-acid 100.0 9.1E-66 2E-70 579.0 46.0 501 81-710 4-512 (513)
67 PLN02330 4-coumarate--CoA liga 100.0 5.5E-66 1.2E-70 584.0 44.3 505 79-715 25-542 (546)
68 PRK08316 acyl-CoA synthetase; 100.0 1.2E-65 2.5E-70 579.6 45.8 506 81-717 10-522 (523)
69 PRK08315 AMP-binding domain pr 100.0 1.5E-65 3.2E-70 583.1 46.3 506 80-717 14-554 (559)
70 PRK07514 malonyl-CoA synthase; 100.0 3.7E-65 8E-70 572.6 47.9 496 82-715 3-502 (504)
71 PRK06087 short chain acyl-CoA 100.0 4.2E-65 9.1E-70 577.4 48.4 507 81-717 22-539 (547)
72 PRK12492 long-chain-fatty-acid 100.0 4.5E-65 9.8E-70 578.3 47.5 512 79-711 21-561 (562)
73 PRK08633 2-acyl-glycerophospho 100.0 2.5E-65 5.5E-70 629.1 48.9 510 79-715 612-1144(1146)
74 TIGR03098 ligase_PEP_1 acyl-Co 100.0 3.3E-65 7.1E-70 574.7 45.7 502 83-710 1-514 (515)
75 PRK12583 acyl-CoA synthetase; 100.0 4.4E-65 9.5E-70 579.3 45.9 507 82-717 18-555 (558)
76 PRK10946 entE enterobactin syn 100.0 7.9E-65 1.7E-69 573.0 46.7 499 81-716 24-534 (536)
77 PRK05851 long-chain-fatty-acid 100.0 3.9E-66 8.3E-71 581.8 35.7 484 84-714 4-522 (525)
78 PRK06164 acyl-CoA synthetase; 100.0 1.2E-64 2.7E-69 572.9 46.4 511 78-717 6-535 (540)
79 PRK06187 long-chain-fatty-acid 100.0 1.2E-64 2.5E-69 571.2 45.5 506 81-714 5-519 (521)
80 PRK05691 peptide synthase; Val 100.0 2.2E-66 4.9E-71 693.6 36.9 518 43-711 1100-1625(4334)
81 PRK06145 acyl-CoA synthetase; 100.0 1.3E-64 2.7E-69 567.2 44.6 489 81-713 1-496 (497)
82 PRK08279 long-chain-acyl-CoA s 100.0 4.4E-65 9.5E-70 583.0 40.9 506 80-715 35-565 (600)
83 PRK07867 acyl-CoA synthetase; 100.0 2.3E-64 5E-69 567.3 45.5 483 80-714 3-507 (529)
84 PRK06188 acyl-CoA synthetase; 100.0 2.9E-64 6.4E-69 567.7 46.1 498 81-715 11-518 (524)
85 PRK06018 putative acyl-CoA syn 100.0 4.3E-64 9.4E-69 568.0 47.4 510 81-714 9-534 (542)
86 PRK13388 acyl-CoA synthetase; 100.0 3.4E-64 7.4E-69 567.7 43.0 485 82-713 3-505 (540)
87 PRK09088 acyl-CoA synthetase; 100.0 4.7E-64 1E-68 561.0 43.1 474 89-714 2-485 (488)
88 TIGR01734 D-ala-DACP-lig D-ala 100.0 6.9E-64 1.5E-68 562.0 44.5 491 83-713 1-501 (502)
89 PRK06178 acyl-CoA synthetase; 100.0 1.9E-63 4.1E-68 566.2 48.6 525 69-715 21-566 (567)
90 TIGR02262 benz_CoA_lig benzoat 100.0 7.9E-64 1.7E-68 562.0 45.0 499 82-711 4-508 (508)
91 PRK07445 O-succinylbenzoic aci 100.0 7.3E-64 1.6E-68 550.5 41.8 425 131-717 20-450 (452)
92 PLN02479 acetate-CoA ligase 100.0 3.6E-63 7.8E-68 563.1 48.6 514 82-714 20-558 (567)
93 PRK07059 Long-chain-fatty-acid 100.0 2.3E-63 5E-68 564.3 46.6 509 81-711 22-555 (557)
94 PRK13390 acyl-CoA synthetase; 100.0 1.6E-63 3.5E-68 558.5 42.3 487 90-709 5-501 (501)
95 PRK08751 putative long-chain f 100.0 2.6E-63 5.6E-68 564.5 44.3 508 81-711 24-557 (560)
96 TIGR03205 pimA dicarboxylate-- 100.0 9.7E-63 2.1E-67 557.2 48.7 509 81-709 20-541 (541)
97 PRK06710 long-chain-fatty-acid 100.0 4.2E-63 9.1E-68 562.9 43.6 514 81-715 23-556 (563)
98 PRK06814 acylglycerophosphoeth 100.0 1.1E-62 2.4E-67 603.2 49.1 498 81-717 630-1135(1140)
99 PRK07787 acyl-CoA synthetase; 100.0 6E-63 1.3E-67 549.1 40.8 455 91-710 9-469 (471)
100 PRK07868 acyl-CoA synthetase; 100.0 4.6E-63 1E-67 588.9 42.5 518 43-711 417-955 (994)
101 PRK09029 O-succinylbenzoic aci 100.0 9.4E-63 2E-67 545.7 42.0 449 83-716 3-455 (458)
102 PRK13383 acyl-CoA synthetase; 100.0 1.4E-62 3.1E-67 552.5 43.4 476 81-709 34-515 (516)
103 PRK04813 D-alanine--poly(phosp 100.0 3.3E-62 7.2E-67 548.7 45.8 490 82-713 2-502 (503)
104 PRK13391 acyl-CoA synthetase; 100.0 6E-62 1.3E-66 546.9 46.0 494 89-714 4-509 (511)
105 PRK08974 long-chain-fatty-acid 100.0 9.8E-62 2.1E-66 551.3 46.6 515 81-717 22-558 (560)
106 PRK07798 acyl-CoA synthetase; 100.0 1.8E-61 3.9E-66 546.8 48.2 507 82-714 3-532 (533)
107 PRK08162 acyl-CoA synthetase; 100.0 2.4E-61 5.2E-66 546.7 47.7 505 82-716 18-541 (545)
108 PRK09192 acyl-CoA synthetase; 100.0 3.7E-62 7.9E-67 556.2 40.1 506 74-716 13-568 (579)
109 PLN03051 acyl-activating enzym 100.0 4E-62 8.7E-67 545.4 39.1 463 162-717 1-494 (499)
110 KOG1175 Acyl-CoA synthetase [L 100.0 1E-61 2.3E-66 521.0 35.8 510 87-715 69-603 (626)
111 PRK05850 acyl-CoA synthetase; 100.0 4.2E-61 9.2E-66 548.2 42.7 514 83-714 2-568 (578)
112 PRK08276 long-chain-fatty-acid 100.0 1.4E-60 3.1E-65 534.9 43.3 479 130-718 11-500 (502)
113 PRK12406 long-chain-fatty-acid 100.0 1.1E-59 2.4E-64 528.5 43.8 484 129-715 10-504 (509)
114 PRK07768 long-chain-fatty-acid 100.0 8.2E-59 1.8E-63 525.8 42.7 496 81-713 1-544 (545)
115 TIGR01923 menE O-succinylbenzo 100.0 8.3E-59 1.8E-63 511.3 38.2 432 132-708 1-436 (436)
116 KOG1179 Very long-chain acyl-C 100.0 1.4E-57 3E-62 466.3 35.2 500 80-711 75-610 (649)
117 PRK08308 acyl-CoA synthetase; 100.0 8E-57 1.7E-61 491.2 39.7 397 130-709 8-408 (414)
118 PF00501 AMP-binding: AMP-bind 100.0 5.9E-57 1.3E-61 493.6 32.5 406 88-589 1-417 (417)
119 TIGR01733 AA-adenyl-dom amino 100.0 6.2E-53 1.3E-57 460.5 34.8 397 132-614 1-408 (408)
120 PRK07824 O-succinylbenzoic aci 100.0 3.9E-47 8.4E-52 406.7 26.6 323 270-714 30-357 (358)
121 COG1020 EntF Non-ribosomal pep 100.0 4.3E-44 9.4E-49 413.3 35.0 437 50-607 202-642 (642)
122 TIGR02372 4_coum_CoA_lig 4-cou 100.0 7.9E-39 1.7E-43 340.6 26.7 288 275-704 95-386 (386)
123 TIGR02155 PA_CoA_ligase phenyl 100.0 4.4E-34 9.6E-39 312.0 25.3 329 273-706 73-418 (422)
124 KOG1178 Non-ribosomal peptide 100.0 3.3E-31 7.1E-36 299.2 19.7 506 81-711 35-576 (1032)
125 KOG3628 Predicted AMP-binding 100.0 9.2E-28 2E-32 261.9 36.1 526 82-720 770-1358(1363)
126 TIGR03335 F390_ftsA coenzyme F 99.9 7.9E-26 1.7E-30 247.2 25.9 255 273-607 84-353 (445)
127 TIGR03089 conserved hypothetic 99.9 1.6E-24 3.6E-29 213.6 19.9 221 88-374 2-227 (227)
128 COG1541 PaaK Coenzyme F390 syn 99.9 8.9E-21 1.9E-25 196.4 26.0 282 271-631 86-384 (438)
129 PRK09188 serine/threonine prot 99.8 3E-20 6.5E-25 193.6 10.9 114 560-715 209-329 (365)
130 KOG3628 Predicted AMP-binding 99.7 3.3E-16 7.2E-21 172.4 24.3 517 81-714 93-704 (1363)
131 TIGR02304 aden_form_hyp probab 99.6 1.9E-13 4.1E-18 146.2 22.3 260 278-631 102-379 (430)
132 PF13193 AMP-binding_C: AMP-bi 99.0 5.5E-10 1.2E-14 88.8 5.1 67 598-702 1-73 (73)
133 PF04443 LuxE: Acyl-protein sy 98.7 7.4E-07 1.6E-11 93.5 17.0 238 273-586 87-352 (365)
134 PF03321 GH3: GH3 auxin-respon 98.2 1.7E-05 3.7E-10 88.3 15.0 163 443-632 265-452 (528)
135 PLN02249 indole-3-acetic acid- 97.9 0.0012 2.6E-08 73.9 20.3 137 442-605 299-456 (597)
136 PLN02247 indole-3-acetic acid- 97.7 0.0032 7E-08 69.9 19.3 142 441-605 289-463 (606)
137 PLN02620 indole-3-acetic acid- 97.5 0.0097 2.1E-07 66.1 20.3 141 441-605 300-469 (612)
138 PF14535 AMP-binding_C_2: AMP- 95.8 0.026 5.5E-07 47.2 6.4 88 591-705 1-91 (96)
139 COG1541 PaaK Coenzyme F390 syn 94.5 0.22 4.7E-06 53.2 9.9 91 129-220 108-200 (438)
140 TIGR03335 F390_ftsA coenzyme F 87.1 6.6 0.00014 43.2 12.2 85 129-216 104-190 (445)
141 TIGR02155 PA_CoA_ligase phenyl 87.0 6.2 0.00014 43.0 12.0 88 130-218 94-183 (422)
142 PRK07656 long-chain-fatty-acid 73.7 41 0.00089 37.5 12.9 99 129-231 184-288 (513)
143 TIGR01923 menE O-succinylbenzo 68.7 53 0.0011 35.6 12.1 97 129-231 129-226 (436)
144 PF00501 AMP-binding: AMP-bind 68.4 65 0.0014 34.7 12.6 122 95-234 153-287 (417)
145 PRK06187 long-chain-fatty-acid 66.9 51 0.0011 36.7 11.8 100 129-232 185-289 (521)
146 PRK12583 acyl-CoA synthetase; 63.8 87 0.0019 35.3 13.0 84 129-215 219-304 (558)
147 TIGR01733 AA-adenyl-dom amino 62.8 1.5E+02 0.0031 31.7 14.0 102 129-233 138-243 (408)
148 PRK06334 long chain fatty acid 62.5 1.5E+02 0.0032 33.4 14.4 100 129-231 201-306 (539)
149 PRK08315 AMP-binding domain pr 60.2 76 0.0017 35.8 11.7 85 129-216 217-303 (559)
150 PRK04319 acetyl-CoA synthetase 58.6 1.4E+02 0.0031 33.8 13.5 101 129-232 223-331 (570)
151 TIGR03098 ligase_PEP_1 acyl-Co 57.5 1E+02 0.0023 34.2 12.1 86 129-218 179-265 (515)
152 PLN03051 acyl-activating enzym 55.4 1.1E+02 0.0023 34.1 11.6 87 129-218 137-224 (499)
153 PRK08308 acyl-CoA synthetase; 54.8 2.5E+02 0.0054 30.2 14.1 99 129-231 119-219 (414)
154 PRK07638 acyl-CoA synthetase; 52.5 2E+02 0.0043 31.7 13.2 87 129-219 161-248 (487)
155 PLN02860 o-succinylbenzoate-Co 50.8 2.2E+02 0.0047 32.3 13.3 99 129-231 190-295 (563)
156 PRK03584 acetoacetyl-CoA synth 49.9 1.8E+02 0.0039 33.7 12.7 85 149-233 299-392 (655)
157 PRK07008 long-chain-fatty-acid 49.4 1.6E+02 0.0035 33.1 11.9 101 129-231 194-300 (539)
158 PRK07788 acyl-CoA synthetase; 47.1 1.2E+02 0.0026 34.1 10.5 100 130-233 226-332 (549)
159 TIGR03089 conserved hypothetic 46.8 74 0.0016 31.2 7.5 54 148-203 171-226 (227)
160 COG4009 Uncharacterized protei 44.6 86 0.0019 24.6 5.7 65 130-205 9-76 (88)
161 PRK13295 cyclohexanecarboxylat 42.9 3.7E+02 0.0081 30.1 13.6 99 129-231 215-319 (547)
162 PRK06188 acyl-CoA synthetase; 42.4 3.2E+02 0.0068 30.5 12.9 99 129-231 186-288 (524)
163 PLN03052 acetate--CoA ligase; 41.9 2E+02 0.0043 34.0 11.4 99 130-231 375-478 (728)
164 COG0399 WecE Predicted pyridox 41.4 1.2E+02 0.0026 32.2 8.4 77 141-221 60-146 (374)
165 PRK08043 bifunctional acyl-[ac 41.3 3.7E+02 0.008 31.6 13.6 100 129-231 383-486 (718)
166 PF01041 DegT_DnrJ_EryC1: DegT 40.6 76 0.0016 33.7 7.0 65 141-209 51-120 (363)
167 KOG1177 Long chain fatty acid 40.5 2.3E+02 0.0049 31.1 10.0 85 129-216 252-338 (596)
168 TIGR02379 ECA_wecE TDP-4-keto- 39.6 1.1E+02 0.0023 32.9 7.9 63 143-209 59-126 (376)
169 PRK05852 acyl-CoA synthetase; 39.4 3.2E+02 0.007 30.5 12.4 87 129-218 194-283 (534)
170 TIGR02316 propion_prpE propion 39.0 2.9E+02 0.0063 31.8 12.1 84 150-233 269-363 (628)
171 PF03744 BioW: 6-carboxyhexano 38.4 45 0.00098 32.7 4.3 41 523-582 171-221 (239)
172 PLN02654 acetate-CoA ligase 38.1 3.9E+02 0.0084 31.1 13.0 84 150-233 312-406 (666)
173 TIGR01217 ac_ac_CoA_syn acetoa 36.5 3.4E+02 0.0074 31.5 12.1 69 149-217 300-371 (652)
174 PRK11706 TDP-4-oxo-6-deoxy-D-g 36.4 1.3E+02 0.0029 32.0 8.2 60 146-209 62-126 (375)
175 PLN02246 4-coumarate--CoA liga 36.1 4.7E+02 0.01 29.2 13.0 88 129-217 197-287 (537)
176 PRK06164 acyl-CoA synthetase; 35.8 4.7E+02 0.01 29.2 13.0 86 129-218 199-285 (540)
177 PF09580 Spore_YhcN_YlaJ: Spor 35.4 1E+02 0.0022 28.8 6.3 33 596-629 77-109 (177)
178 PLN02565 cysteine synthase 34.6 3E+02 0.0066 28.6 10.2 72 140-211 50-122 (322)
179 PRK08316 acyl-CoA synthetase; 34.0 2.5E+02 0.0054 31.2 10.3 85 129-217 189-275 (523)
180 PRK07470 acyl-CoA synthetase; 34.0 6.2E+02 0.013 28.1 13.5 102 129-231 181-287 (528)
181 TIGR02262 benz_CoA_lig benzoat 33.1 3.2E+02 0.007 30.2 11.0 85 129-215 179-265 (508)
182 cd01445 TST_Repeats Thiosulfat 32.9 1.2E+02 0.0026 27.0 6.0 45 141-185 81-128 (138)
183 KOG0023 Alcohol dehydrogenase, 32.4 3.1E+02 0.0066 28.4 9.0 77 146-225 173-249 (360)
184 PF00818 Ice_nucleation: Ice n 32.1 20 0.00042 18.8 0.4 10 476-485 1-10 (16)
185 TIGR02275 DHB_AMP_lig 2,3-dihy 31.7 6.8E+02 0.015 27.8 13.4 99 129-231 201-306 (527)
186 PRK03640 O-succinylbenzoic aci 31.7 3.9E+02 0.0084 29.3 11.3 85 129-217 159-244 (483)
187 TIGR03590 PseG pseudaminic aci 31.3 2.4E+02 0.0052 28.6 8.7 90 138-235 18-112 (279)
188 TIGR02372 4_coum_CoA_lig 4-cou 30.9 6.9E+02 0.015 26.7 15.2 126 82-227 80-209 (386)
189 TIGR03208 cyc_hxne_CoA_lg cycl 30.8 7.2E+02 0.016 27.7 13.4 99 129-231 213-317 (538)
190 PF01037 AsnC_trans_reg: AsnC 30.8 1.9E+02 0.0042 21.9 6.3 46 586-633 3-48 (74)
191 PRK07529 AMP-binding domain pr 30.7 7.6E+02 0.016 28.4 13.8 100 129-231 231-340 (632)
192 PRK08633 2-acyl-glycerophospho 29.3 6.5E+02 0.014 31.4 13.8 100 129-231 800-905 (1146)
193 PRK10946 entE enterobactin syn 28.9 7E+02 0.015 27.8 12.9 86 129-218 200-288 (536)
194 COG2236 Predicted phosphoribos 28.4 1E+02 0.0022 29.3 4.8 33 129-161 5-37 (192)
195 PRK08314 long-chain-fatty-acid 28.2 5.3E+02 0.012 28.8 11.8 84 129-216 208-293 (546)
196 TIGR03588 PseC UDP-4-keto-6-de 28.1 2.7E+02 0.0059 29.6 8.9 65 141-208 55-127 (380)
197 PRK13383 acyl-CoA synthetase; 27.9 4.6E+02 0.01 29.1 11.1 86 145-231 207-299 (516)
198 PLN02556 cysteine synthase/L-3 27.9 5.5E+02 0.012 27.3 10.8 62 149-210 103-165 (368)
199 TIGR01139 cysK cysteine syntha 27.7 4.3E+02 0.0094 27.0 9.9 66 146-212 47-113 (298)
200 TIGR03443 alpha_am_amid L-amin 27.6 5.7E+02 0.012 32.9 13.0 103 129-234 433-539 (1389)
201 PRK11658 UDP-4-amino-4-deoxy-L 27.6 2.4E+02 0.0052 30.1 8.3 62 142-207 60-126 (379)
202 PF09269 DUF1967: Domain of un 27.2 39 0.00085 26.1 1.5 30 131-160 33-62 (69)
203 PRK11761 cysM cysteine synthas 26.9 4.4E+02 0.0095 27.0 9.7 76 132-210 41-117 (296)
204 cd01519 RHOD_HSP67B2 Member of 26.7 2.2E+02 0.0047 23.5 6.3 53 129-181 36-92 (106)
205 KOG0953 Mitochondrial RNA heli 26.5 1.3E+02 0.0029 33.2 5.8 146 50-233 281-434 (700)
206 PRK05620 long-chain-fatty-acid 26.3 6.5E+02 0.014 28.4 12.1 87 129-216 199-286 (576)
207 PRK12406 long-chain-fatty-acid 26.3 8.2E+02 0.018 27.0 12.8 82 149-231 190-278 (509)
208 PRK10252 entF enterobactin syn 25.8 7.3E+02 0.016 31.5 13.5 103 129-234 616-727 (1296)
209 PRK15407 lipopolysaccharide bi 25.7 2.3E+02 0.005 31.0 7.8 57 149-209 105-166 (438)
210 PRK07787 acyl-CoA synthetase; 25.6 5.8E+02 0.013 27.9 11.2 98 129-231 146-248 (471)
211 PF00290 Trp_syntA: Tryptophan 25.3 5.9E+02 0.013 25.6 9.8 67 131-202 93-164 (259)
212 TIGR03595 Obg_CgtA_exten Obg f 25.0 57 0.0012 25.2 2.1 22 140-161 42-63 (69)
213 PRK06814 acylglycerophosphoeth 24.9 1.1E+03 0.023 29.5 14.6 100 129-231 811-914 (1140)
214 TIGR01734 D-ala-DACP-lig D-ala 24.9 6.2E+02 0.013 27.8 11.4 100 129-231 159-265 (502)
215 COG0318 CaiC Acyl-CoA syntheta 24.3 1E+03 0.022 26.6 13.1 90 129-219 189-281 (534)
216 PF05452 Clavanin: Clavanin; 24.1 33 0.00071 25.7 0.5 11 556-566 69-79 (80)
217 COG1064 AdhP Zn-dependent alco 24.1 3.3E+02 0.0072 28.5 8.0 61 146-210 158-218 (339)
218 TIGR01136 cysKM cysteine synth 24.0 5.4E+02 0.012 26.3 9.8 66 145-211 47-113 (299)
219 PRK06702 O-acetylhomoserine am 23.6 3.4E+02 0.0074 29.6 8.5 33 175-208 121-153 (432)
220 PF06543 Lac_bphage_repr: Lact 23.5 59 0.0013 22.7 1.6 26 448-473 22-47 (49)
221 TIGR02188 Ac_CoA_lig_AcsA acet 23.4 8.9E+02 0.019 27.7 12.6 69 150-218 273-346 (625)
222 TIGR00936 ahcY adenosylhomocys 23.2 6.9E+02 0.015 27.0 10.5 81 130-210 6-89 (406)
223 PLN02736 long-chain acyl-CoA s 23.0 7.2E+02 0.016 28.7 11.7 84 129-218 239-324 (651)
224 PLN03013 cysteine synthase 22.7 5.8E+02 0.013 27.8 9.9 66 146-211 164-230 (429)
225 TIGR02304 aden_form_hyp probab 22.6 9.9E+02 0.021 26.1 11.8 81 150-233 138-221 (430)
226 PRK04813 D-alanine--poly(phosp 22.4 1E+03 0.022 26.0 12.5 102 129-233 161-269 (503)
227 PRK08279 long-chain-acyl-CoA s 22.3 8.5E+02 0.019 27.6 12.1 84 129-216 217-302 (600)
228 PF06277 EutA: Ethanolamine ut 22.1 5.2E+02 0.011 28.4 9.2 66 82-170 353-423 (473)
229 PRK13388 acyl-CoA synthetase; 21.8 1E+03 0.022 26.5 12.5 82 129-214 168-251 (540)
230 PRK06381 threonine synthase; V 21.6 3.3E+02 0.0072 28.2 7.8 64 146-213 57-120 (319)
231 PRK09274 peptide synthase; Pro 21.5 9.1E+02 0.02 27.0 12.0 94 129-231 192-295 (552)
232 PLN02614 long-chain acyl-CoA s 21.5 7.6E+02 0.016 28.7 11.5 86 129-217 241-330 (666)
233 cd00640 Trp-synth-beta_II Tryp 21.4 7.8E+02 0.017 24.1 10.8 66 146-212 41-106 (244)
234 PRK10524 prpE propionyl-CoA sy 21.1 1E+03 0.022 27.3 12.4 84 150-233 270-364 (629)
235 PRK06060 acyl-CoA synthetase; 21.0 7.8E+02 0.017 28.8 11.6 104 129-234 163-270 (705)
236 PRK00174 acetyl-CoA synthetase 20.8 9.9E+02 0.021 27.4 12.3 83 150-232 282-375 (637)
237 TIGR02898 spore_YhcN_YlaJ spor 20.8 4.1E+02 0.0089 24.4 7.1 31 597-628 57-87 (158)
238 PHA02885 putative interleukin 20.4 3.6E+02 0.0077 22.4 5.7 39 560-604 49-87 (135)
239 KOG0025 Zn2+-binding dehydroge 20.3 2.9E+02 0.0063 28.1 6.3 64 151-214 157-221 (354)
No 1
>KOG1180 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=1.5e-120 Score=923.81 Aligned_cols=654 Identities=53% Similarity=0.853 Sum_probs=622.1
Q ss_pred CCCCccccccCCCCccccccCCCCCCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHH
Q 004977 58 GGEPGYAIRNAQIPELVEVPWKGASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVF 137 (721)
Q Consensus 58 ~~~~r~~~~~~~~~~~~~~~~~~~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~ 137 (721)
+.+||++...++ +...++++..|++++|+++++++.++.++.+|+++..+.+...||+.|+++++++|.|+||.|+.
T Consensus 20 ~~p~Rnv~~~~~---L~~~~~~g~~Tl~~~~~~~~~k~g~~~~mGtR~li~~h~ek~~dGK~f~k~~Lg~Y~w~sy~ev~ 96 (678)
T KOG1180|consen 20 TAPYRNVRSFDG---LVSPPNPGASTLYELFEECVKKFGKKDAMGTRELIKEHEEKQVDGKTFEKYELGDYKWMSYNEVY 96 (678)
T ss_pred CccccccccCCC---ccCCCCCCcccHHHHHHHHHHhcCCCccccHHHHHHHHhhccCCCeEEEEEeccceeeecHHHHH
Confidence 677777776444 78899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCCCCCE-EEEEccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccchhHH
Q 004977 138 DRACSFASGLVNFGHNVDTR-AAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKL 216 (721)
Q Consensus 138 ~~v~~lA~~L~~~Gv~~gd~-V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 216 (721)
+++.++|++|.+.|++++++ ++|+++.+.+|+++++||++.+..+|.++.+++.+.+.|.|++++++.+||+.+.++.+
T Consensus 97 ~~~~~~gsGL~~lG~k~~e~k~~iFa~TraeWm~ta~gC~~q~ipvVT~Y~TLGeeal~hsl~Et~~~~i~T~~~LL~kl 176 (678)
T KOG1180|consen 97 ERVHNFGSGLVKLGLKPKETKIAIFAETRAEWMITAQGCFSQNIPVVTAYATLGEEALIHSLNETESTAIFTDSELLPKL 176 (678)
T ss_pred HHHHHHHHHHHHhCCCCCCCeEEEEecchHHHHHHHHHHHhcCCeEEEEehhcChhhhhhhhccccceEEEeCHHHHHHH
Confidence 99999999999999998777 99999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhcCCCccEEEEecCCCCCcc-CCccC-CCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEeccCCCCCcchhe
Q 004977 217 SAVSSSLKTIKNVIYFENDGSEKD-SGVSG-GISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVM 294 (721)
Q Consensus 217 ~~~~~~~~~~~~ii~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~ 294 (721)
......++.+++||++++.+.+.. +.+.. ..+++.+++|+++++.++....++.++.|+|+|+|||||||||.|||||
T Consensus 177 ~~~l~~~~~vk~II~~d~id~~~~~~~v~~i~~p~i~i~Sf~~v~~lG~~~~~~~~~P~p~Dia~IMYTSGSTG~PKGVm 256 (678)
T KOG1180|consen 177 KAPLKQAKTVKHIIYFDPIDYDAAKDDVNSIVRPDIKIISFDDVEKLGKENEIPPHPPKPSDIACIMYTSGSTGLPKGVM 256 (678)
T ss_pred HHHHhccCceeEEEEecCCCCccchhhhhhhccCCeEEEEHHHHHhhCCcCCCCCCCCCCCceEEEEEcCCCCCCCceEE
Confidence 999999999999999996543321 11221 2357899999999999998877777789999999999999999999999
Q ss_pred eccHHHHHHHHHHHhhCCCCCCCcEEEeccChHHHHHHHHHHHHHHhcceEeeCccccccccchhhccCccCcceeecce
Q 004977 295 ITHGNIVATAAAIKTLIPNPGRSDVYLAYLPLAHVLELAAESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPT 374 (721)
Q Consensus 295 ~sh~~l~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t 374 (721)
++|+|+++.+.+.....+.+++.|+++.++||+|++.+...+.+++.|+++.+.++.++.+.++.+.+++.+++..++||
T Consensus 257 l~H~NiVA~~~G~~~~v~~lg~~D~yi~yLPLAHIlEl~aE~~~ft~G~~iGY~S~~TLtdts~ki~kg~kGD~~~lkPT 336 (678)
T KOG1180|consen 257 LTHSNIVAGVTGVGENVPELGPKDRYIAYLPLAHILELTAELVCFTWGGRIGYSSPLTLTDTSSKIKKGCKGDLTELKPT 336 (678)
T ss_pred EecccHHhhhhhhcccCcccCCCceEEEechHHHHHHHHHHHHHHhhCCEeecCCcceecccchhhccCCcCccccccch
Confidence 99999999999998887789999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeechHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecC
Q 004977 375 LMAAVPAIFDRVREGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGG 454 (721)
Q Consensus 375 ~l~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG 454 (721)
+|.+||++|+++.+.+.+++.+.+.+.++||+.+|+++++.++ +++..++++|.++|+++|..+|++||++++||
T Consensus 337 iM~~VpAV~drVrKgVl~kV~~~~~~~k~lF~~aY~~K~~~~~-----~~g~~s~~ld~lVFkKIr~~lGG~lR~~LsGG 411 (678)
T KOG1180|consen 337 IMAAVPAVMDRVRKGVLSKVNAMPGLQKKLFWTAYERKLSLIE-----RNGPGSPLLDALVFKKIRALLGGNLRYILSGG 411 (678)
T ss_pred hhhhhHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHh-----ccCCchhhHHHHHHHHHHHHhCCceEEEEeCC
Confidence 9999999999999999999999999999999999999999886 36778899999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhhCCccccccccccccccccccCCCCCCCCccCCCcCcceEEEEecCCCCcccCCCCCCcceEEEcc
Q 004977 455 APLSADSQRFINICMGAPIGQAYGLTETCAGSTFSEWDDPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGG 534 (721)
Q Consensus 455 ~~l~~~~~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g 534 (721)
+||+++.++|+..++++++.++||+||+++..+...+.+...+.+|.|+|+++++++|+++++|.+...| ++|||+|+|
T Consensus 412 apLS~dtQrF~nic~C~Pv~qGYGLTEtca~~tv~e~~d~~~g~vG~pl~c~eiKLvdw~EgGY~~~~~P-PrGEI~i~G 490 (678)
T KOG1180|consen 412 APLSPDTQRFMNICFCCPVLQGYGLTETCAAATVLEPEDFSTGRVGAPLPCCEIKLVDWEEGGYFAKNKP-PRGEILIGG 490 (678)
T ss_pred CCCCHHHHHHHHHhccccccccccccchhcccEecChhhcccccccCCccceEEEEEEhhhcCccCCCCC-CCceEEecC
Confidence 9999999999999999999999999999999999999999999999999999999999999999998777 899999999
Q ss_pred ccccccccCCCcccccccccCCCCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcccceEEE
Q 004977 535 FNVTAGYFNNPGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYVDNIMI 614 (721)
Q Consensus 535 ~~v~~gY~~~~~~t~~~f~~~~~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~~~~V 614 (721)
+++..|||+||++|++.|.. +||.+||+|||+|++.+||+|.|++|+||++|+.+||+|+++.||+++..+|.|.++||
T Consensus 491 ~~vt~gY~kn~ekT~e~ft~-~~G~~WF~TGDIGe~~pdG~LkIIDRKKdLVKlq~GEYIsL~KvEa~l~s~p~V~NICv 569 (678)
T KOG1180|consen 491 PNVTMGYYKNEEKTKEDFTV-EDGQRWFRTGDIGEFHPDGCLKIIDRKKDLVKLQNGEYISLGKVEAALRSSPYVDNICV 569 (678)
T ss_pred CccChhhhCChhhhhhhcee-cCCcEEEeccccceecCCCcEEEeechhhhhhhcccceeehHHHHHHHhcCcchhheEE
Confidence 99999999999999999984 48667999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCceEEEEEEcChHHHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCCCCCCC
Q 004977 615 HADPFHNYCVALVVPSHKALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEPWTPEA 694 (721)
Q Consensus 615 ~g~~~~~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~~~p~~ 694 (721)
++++...+++|+|||++..+..|+++.|++.++++++|++.++++++.++|.+++++.+|.++++|..|++.+++|||++
T Consensus 570 yAd~~~s~~VaiVVPn~~~lt~lA~k~Gi~~~~~e~lc~d~k~~~~v~k~L~~~ak~~~L~~iEip~~I~l~~e~WTPen 649 (678)
T KOG1180|consen 570 YADSNKSKPVAIVVPNQKHLTKLAEKAGISGSTWEELCEDKKVVKAVLKELIEAAKSQKLERIEIPAKIVLSPEPWTPEN 649 (678)
T ss_pred ecccccceeEEEEcCCchHHHHHHHHcCCChhhHHHHhccHHHHHHHHHHHHHHHHhcccccccccceeEecCCCcCCCc
Confidence 99999999999999999999999999999999999999999999999999999999899999999999999999999999
Q ss_pred CccCcccccChHHHHHHHHHHHHhhhC
Q 004977 695 GLVTAALKIKREQLKAKFKDDLQMLYQ 721 (721)
Q Consensus 695 ~~~t~~gKi~R~~l~~~~~~~i~~~Y~ 721 (721)
|++|+..|++|+.++..|+++||++|+
T Consensus 650 GlvT~A~KLKRk~I~~~~k~ei~~~Y~ 676 (678)
T KOG1180|consen 650 GLVTAALKLKRKEILAAYKKEIDRLYK 676 (678)
T ss_pred cccHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999996
No 2
>KOG1256 consensus Long-chain acyl-CoA synthetases (AMP-forming) [Lipid transport and metabolism]
Probab=100.00 E-value=1.1e-104 Score=848.26 Aligned_cols=623 Identities=37% Similarity=0.634 Sum_probs=556.7
Q ss_pred CCCCccccccCCCCccccccCCCCCCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHH
Q 004977 58 GGEPGYAIRNAQIPELVEVPWKGASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVF 137 (721)
Q Consensus 58 ~~~~r~~~~~~~~~~~~~~~~~~~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~ 137 (721)
++.||.....+. ++...+.++..|+++.|++.+..+|+.++|++|... ++. ++|+|+||+|+.
T Consensus 53 ~~~~~s~~~~~~--~~~~~~~~~~~T~~~~f~~~~~~~~~~p~LG~r~~~--------~~~-------~~~~~~tY~q~~ 115 (691)
T KOG1256|consen 53 DGSRRSAVLPRE--ELFSCPFDGPLTLYEGFRRSVEKSGNGPMLGTRVIV--------DGK-------GPYEWLTYKQVY 115 (691)
T ss_pred CCceeeeeccCC--CCCCCCCCCcccHHHHhhcchhccCCCCceeEEecc--------cCC-------CCcEEEEHHHHH
Confidence 456666655432 233445568899999999999999999999998533 343 788999999999
Q ss_pred HHHHHHHHHHHhCCCCCCCEEEEEccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEC-ccchhHH
Q 004977 138 DRACSFASGLVNFGHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICD-SKQLKKL 216 (721)
Q Consensus 138 ~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~-~~~~~~~ 216 (721)
+++.++|++|+++|+++++.|+|++.||+||+++.+||...|+++|||+.+++++++.+|++++++.++|++ ++....+
T Consensus 116 e~~~~~~~~l~~lG~~~~~~VGIy~~N~pEWiis~~a~~~~~~v~VplYdTlg~ea~~~Ii~~~e~~iv~vd~~~k~~~l 195 (691)
T KOG1256|consen 116 ERAENLGSGLRKLGVKEDSKVGIYAFNRPEWIISEMACYAYSLVNVPLYDTLGAEAVHYIINHAEISIVFVDNAKKAEKL 195 (691)
T ss_pred HHHHHHHHHHHHhCCCCCceEEEeccCChhhHHhHHHHHhcCCEEeecccCCCHHHHHHHHHhcceeEEEEeCHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999 5556666
Q ss_pred Hhhhh--cCCCccEEEEecCCCCCccCCccCCCCCceEeeHHHHHhcCCCCCCCC-CCCCCCCeEEEEeccCCCCCcchh
Q 004977 217 SAVSS--SLKTIKNVIYFENDGSEKDSGVSGGISNWTVSSFSEVEKLGKRSPVDP-SLPSQNGVAVIMYTSGSTGLPKGV 293 (721)
Q Consensus 217 ~~~~~--~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~a~i~~TSGTTG~PKgV 293 (721)
.+... .+|.++.+|.+++......... ...++.+++|+++.+.+......+ .++.|||.|.|+|||||||.||||
T Consensus 196 l~~~~~~~~~~LK~iI~~~~~~~~~~~~~--~~~gv~v~S~~e~~~lG~~~~~~~~~~p~p~d~atI~yTSGTTG~PKGV 273 (691)
T KOG1256|consen 196 LEIKENDSLPSLKAIIQLDEPSDELKEKA--ENNGVEVYSWDEFEELGKKNQRKPRVPPKPDDLATICYTSGTTGNPKGV 273 (691)
T ss_pred HhhcccccCccceeEEEecCCchhhhhhh--hcCCeEEEEHHHHHhhcccccCCCCCCCCccceEEEEEcCCCCCCCceE
Confidence 66655 4889999999988754332211 223688999999999998766666 588999999999999999999999
Q ss_pred eeccHHHHHHHHHHHh---hC--CCCCCCcEEEeccChHHHHHHHHHHHHHHhcceEee--CccccccccchhhccCccC
Q 004977 294 MITHGNIVATAAAIKT---LI--PNPGRSDVYLAYLPLAHVLELAAESIMLCAGCAIGY--GSTLTMTDTSSKIKKGTKG 366 (721)
Q Consensus 294 ~~sh~~l~~~~~~~~~---~~--~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~~~--~~~~~~~~~~~~~~~~~~~ 366 (721)
|+||+|+++.+..... .. .....+|++++++||+|++........+..|+++++ +|+..+.+.
T Consensus 274 MLTH~Niv~~v~~~~~~~~~~~~~~~~~~dv~lSyLPLAHi~er~~~~~~~~~G~~IgF~~gD~~~l~~d---------- 343 (691)
T KOG1256|consen 274 MLTHRNIVSDVAGIFFLSAAENAKATVGDDVYLSYLPLAHIFERVVELYTFYIGAKIGFARGDILKLTDD---------- 343 (691)
T ss_pred EEeccceeehhhhhhhhhhcccccccccCceEEEeCcHHHHHHHHHHHhHhhcccEEEEecCChHHHHHH----------
Confidence 9999999997654322 21 122347999999999999999988888899999999 677777777
Q ss_pred cceeecceEEeechHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHH-HhhhccccccCCchhhhHHHHHHHHHHHHhCC
Q 004977 367 DVSVLKPTLMAAVPAIFDRVREGVVKKVEEKGGLTKNLFNIGYKRRL-AAVEGSWFGAWGLERMLWDAIVFKSVRAVLGG 445 (721)
Q Consensus 367 ~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (721)
+++.+||.+.+||.+|+++.+.+++.+...+.++++||++|+++++ ..+..+.... ..++||+++|+++++.+|+
T Consensus 344 -lk~lkPT~f~~VPRVl~riye~I~~~~~~sgflkr~l~~~A~~~k~~~~~~~G~~~~---~~~~~D~lVf~KI~~~LGg 419 (691)
T KOG1256|consen 344 -LKELKPTVFPGVPRVLERIYEGIQKQVQKSGFLKRKLFNFAMAYKLEHRLMKGKSRS---RDRFADKLVFHKIKQSLGG 419 (691)
T ss_pred -HHHhCCcEEeccHhHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHhhCCCCcc---cchHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999988899999999999999 4444222111 5789999999999999999
Q ss_pred cEEEEEecCCCCCHHHHHHHHHhhCCccccccccccccccccccCCCCCCCCccCCCcCcceEEEEecCCCCcccCCCCC
Q 004977 446 RIRFMICGGAPLSADSQRFINICMGAPIGQAYGLTETCAGSTFSEWDDPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPM 525 (721)
Q Consensus 446 ~lr~v~~gG~~l~~~~~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g 525 (721)
++|.+++|++|+++++..+++..+|++|+++||+|||++.++...+.+...+++|.|+|++++|++|+++.++.+ .+
T Consensus 420 ~vr~~~sGaAPls~ev~~F~r~~~g~~v~eGYGlTEts~g~~~~~~~d~~lgsvG~p~p~~~vKL~dvpe~ny~a---~~ 496 (691)
T KOG1256|consen 420 NVRLIISGAAPLSPEVLTFFRAALGCRVLEGYGLTETSAGTTLTLPGDNVLGSVGPPVPGNEVKLVDVPEMNYDA---DG 496 (691)
T ss_pred ceeEEEecCCCCCHHHHHHHHHhcCceeeecccccccCCceEeccCCCCCCCCcCCcccCceEEEechHHhCcCc---CC
Confidence 999999999999999999999999999999999999998777777777788999999999999999999998865 55
Q ss_pred CcceEEEccccccccccCCCcccccccccCCCCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhc
Q 004977 526 PRGEIVVGGFNVTAGYFNNPGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALIS 605 (721)
Q Consensus 526 ~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~~~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~ 605 (721)
..|||||||++||.|||+||++|+++|+ +| ||+||||+|+||++|.|.|+||+|++||+++||+|.|+.||+++.+
T Consensus 497 ~~GEIcirG~~Vf~GYyK~p~~T~e~id--eD--GWLhTGDiG~~~p~G~l~IidRkK~ifklaqGEyVaPe~IEniy~~ 572 (691)
T KOG1256|consen 497 SKGEICVRGPNVFMGYYKDPEKTAEAID--ED--GWLHTGDIGEWDPNGTLKIIDRKKNIFKLAQGEYVAPEKIENIYKR 572 (691)
T ss_pred CcceEEEecchhceeccCChHHHhhhhc--cc--cccccccceeECCCccEEEEecccceEEcCCCCccChHHHHHHHhc
Confidence 6899999999999999999999999998 77 9999999999999999999999999999999999999999999999
Q ss_pred CcccceEEEEecCCCceEEEEEEcChHHHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEe
Q 004977 606 SDYVDNIMIHADPFHNYCVALVVPSHKALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKL 685 (721)
Q Consensus 606 ~p~V~~~~V~g~~~~~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~ 685 (721)
.+.|.+++|+|.+.+.+++|+|+|+++....|+.+.++. .+++++|+++++++.+..++.+..++..|..++..+.|.+
T Consensus 573 ~~~V~qi~V~g~s~~~~LvaiVvpd~e~~~~~a~~~~~~-~~~eelc~n~~~k~~vl~el~~~~~~~~l~~fe~vk~v~l 651 (691)
T KOG1256|consen 573 SLPVQQIFVLGDSLRSFLVAIVVPDPEVLKSWAAKDGVK-GTFEELCRNLDVKEAVLSELVKVGKENGLKGFEQVKKVHL 651 (691)
T ss_pred CCceEEEEEECCcchhcEEEEEecChhhchhhHHHccCc-hhHHHHhcChhhHHHHHHHHHHHHhhhhccChhhEeeEEE
Confidence 999999999999999999999999999999999977888 6699999999999999999999999999999999999999
Q ss_pred eCCCCCCCCCccCcccccChHHHHHHHHHHHHhhhC
Q 004977 686 MPEPWTPEAGLVTAALKIKREQLKAKFKDDLQMLYQ 721 (721)
Q Consensus 686 ~~~~~~p~~~~~t~~gKi~R~~l~~~~~~~i~~~Y~ 721 (721)
.+.+|+.++|++|||.|++|..|.++|+++||+||+
T Consensus 652 ~~~~FsienglltPTlK~KR~~l~~~yk~~Id~mY~ 687 (691)
T KOG1256|consen 652 LPDPFSIENGLLTPTLKIKRPQLLKYYKKQIDELYK 687 (691)
T ss_pred ecccccccCCccchhhhhhhHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999995
No 3
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=100.00 E-value=4.4e-100 Score=878.99 Aligned_cols=670 Identities=76% Similarity=1.274 Sum_probs=578.0
Q ss_pred cCCCCCCCCCCccccccCCCCccccccCCCCCCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEE
Q 004977 51 RGVPVEVGGEPGYAIRNAQIPELVEVPWKGASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEW 130 (721)
Q Consensus 51 ~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~ 130 (721)
+.+++..+++.....++...+.....++++..|+.++|+++++++||++|+.++.+...+.....+|+.|++...++|++
T Consensus 27 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~t~~~l~~~~~~~~pd~~al~~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (696)
T PLN02387 27 RGVPVDVGGEPGYAIRNARFPELVETPWEGATTLAALFEQSCKKYSDKRLLGTRKLISREFETSSDGRKFEKLHLGEYEW 106 (696)
T ss_pred ceecCCCCCCCCCceecCccccccccCCCCCCCHHHHHHHHHHHCCCCceEEEecccccccccccCCcccccccCCCcEE
Confidence 44555444444434444333345666788889999999999999999999988754332222222566666677789999
Q ss_pred eeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECc
Q 004977 131 QTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDS 210 (721)
Q Consensus 131 ~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~ 210 (721)
+||+|+.++++++|++|.++|+++||+|+|+++|++||+++++||+++|+++|||+++++++++.++|++++++++|++.
T Consensus 107 ~Ty~el~~~v~~lA~~L~~lG~~~gd~Vai~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~li~~~ 186 (696)
T PLN02387 107 ITYGQVFERVCNFASGLVALGHNKEERVAIFADTRAEWLIALQGCFRQNITVVTIYASLGEEALCHSLNETEVTTVICDS 186 (696)
T ss_pred EEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHccCCCEEEECH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cchhHHHhhhhcCCCccEEEEecCCCCCccCCccCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEeccCCCCCc
Q 004977 211 KQLKKLSAVSSSLKTIKNVIYFENDGSEKDSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLP 290 (721)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~P 290 (721)
+..+.+..+...++.+++++.+++......... ....++.+.+|+++...+...+.....+.++|+++|+|||||||.|
T Consensus 187 ~~~~~l~~~~~~~~~l~~ii~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~I~yTSGTTG~P 265 (696)
T PLN02387 187 KQLKKLIDISSQLETVKRVIYMDDEGVDSDSSL-SGSSNWTVSSFSEVEKLGKENPVDPDLPSPNDIAVIMYTSGSTGLP 265 (696)
T ss_pred HHHHHHHHHhhccCCceEEEEECCCCchhhhhh-hccCCcEEEEHHHHHHhhccCCCCCCCCCccceEEEEecCCCCCCC
Confidence 888888777778888999999875432110000 0112456778998887655443334456789999999999999999
Q ss_pred chheeccHHHHHHHHHHHhhCCCCCCCcEEEeccChHHHHHHHHHHHHHHhcceEeeCccccccccchhhccCccCccee
Q 004977 291 KGVMITHGNIVATAAAIKTLIPNPGRSDVYLAYLPLAHVLELAAESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSV 370 (721)
Q Consensus 291 KgV~~sh~~l~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 370 (721)
|||++||+|+++.+......++.+.++|++++++|++|++++...+.++..|+++.++++..+.+....+...+..++++
T Consensus 266 KGV~lth~~l~~~~~~~~~~~~~~~~~d~~l~~lPl~Hi~~~~~~~~~~~~g~~i~~g~~~~l~~~~~~~~~~~~~~i~~ 345 (696)
T PLN02387 266 KGVMMTHGNIVATVAGVMTVVPKLGKNDVYLAYLPLAHILELAAESVMAAVGAAIGYGSPLTLTDTSNKIKKGTKGDASA 345 (696)
T ss_pred CEEEEEcHHHHHHHHHHHhhcCCCCCCCEEEEECcHHHHHHHHHHHHHHHhCCEEEECChhhhcccccccccCchhhHHH
Confidence 99999999999988887665436889999999999999999988777889999999988776666544444556667999
Q ss_pred ecceEEeechHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEE
Q 004977 371 LKPTLMAAVPAIFDRVREGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFM 450 (721)
Q Consensus 371 ~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v 450 (721)
++||+++++|++++++.+....+....+.+++.+|++++..++..+...+....++.+++|+.++++++++.+|+++|.+
T Consensus 346 ~~pT~~~~vP~~l~~l~~~~~~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~i 425 (696)
T PLN02387 346 LKPTLMTAVPAILDRVRDGVRKKVDAKGGLAKKLFDIAYKRRLAAIEGSWFGAWGLEKLLWDALVFKKIRAVLGGRIRFM 425 (696)
T ss_pred hCCcEEEehhHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHhccCCcccccccchhhHHHHHHHHHHHhCCcEEEE
Confidence 99999999999999999988877778888999999999999988877666666677888999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHHhhCCccccccccccccccccccCCCCCCCCccCCCcCcceEEEEecCCCCcccCCCCCCcceE
Q 004977 451 ICGGAPLSADSQRFINICMGAPIGQAYGLTETCAGSTFSEWDDPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEI 530 (721)
Q Consensus 451 ~~gG~~l~~~~~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl 530 (721)
++||+++++++.++++.++|++++++||+||+++.++.....+...+++|+|+|+++++|+|++++++...+.+++.|||
T Consensus 426 ~~GGapl~~~~~~~~~~~~g~~v~~~YG~TEt~~~~~~~~~~~~~~gsvG~p~p~~evkivd~~~~~~~~~~~~~p~GEi 505 (696)
T PLN02387 426 LSGGAPLSGDTQRFINICLGAPIGQGYGLTETCAGATFSEWDDTSVGRVGPPLPCCYVKLVSWEEGGYLISDKPMPRGEI 505 (696)
T ss_pred EEcCCCCCHHHHHHHHHHcCCCeeEeechhhcccceeecCcccCCCCccCCCCCceEEEEeeccccCcccCCCCCCCceE
Confidence 99999999999999998889999999999999987776666666678999999999999999777777654566778999
Q ss_pred EEccccccccccCCCcccccccccCCCCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcccc
Q 004977 531 VVGGFNVTAGYFNNPGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYVD 610 (721)
Q Consensus 531 ~v~g~~v~~gY~~~~~~t~~~f~~~~~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~ 610 (721)
+|+||+++.|||++|+.|+++|..+++|.|||+|||+|++|+||+|+|+||+||+||+++|+||+|++||++|.+||.|.
T Consensus 506 ~vrGp~v~~GY~~~pe~T~~~f~~d~~G~~W~~TGDig~~d~dG~l~i~gR~kd~ik~~~Ge~I~p~eIE~~l~~~p~V~ 585 (696)
T PLN02387 506 VIGGPSVTLGYFKNQEKTDEVYKVDERGMRWFYTGDIGQFHPDGCLEIIDRKKDIVKLQHGEYVSLGKVEAALSVSPYVD 585 (696)
T ss_pred EeccCcccchhcCCHHHHhhhhccccCCCceeecCceEEECCCCcEEEEEcccceEECCCCeEEchHHHHHHHhcCCCee
Confidence 99999999999999999999995335545699999999999999999999999999997899999999999999999999
Q ss_pred eEEEEecCCCceEEEEEEcChHHHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCCC
Q 004977 611 NIMIHADPFHNYCVALVVPSHKALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEPW 690 (721)
Q Consensus 611 ~~~V~g~~~~~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~~ 690 (721)
+|+|+|++.+.+++|+|+++++.+..|+++.+++..++.++|+++++.+++.+++.+.+++.+|+.|++|++|.+++++|
T Consensus 586 ~~~V~g~~~~~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~e~~~~i~l~~~~~ 665 (696)
T PLN02387 586 NIMVHADPFHSYCVALVVPSQQALEKWAKKAGIDYSNFAELCEKEEAVKEVQQSLSKAAKAARLEKFEIPAKIKLLPEPW 665 (696)
T ss_pred EEEEEecCCcceEEEEEEeCHHHHHHHHHHcCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHcCCCCcceeeEEEEECCCC
Confidence 99999999888999999999999999999999888889999999999999999999998878999999999999999999
Q ss_pred CCCCCccCcccccChHHHHHHHHHHHHhhhC
Q 004977 691 TPEAGLVTAALKIKREQLKAKFKDDLQMLYQ 721 (721)
Q Consensus 691 ~p~~~~~t~~gKi~R~~l~~~~~~~i~~~Y~ 721 (721)
+|++|++|+++|++|+.+++.|+++|++||+
T Consensus 666 t~~~g~lT~t~K~~R~~i~~~y~~~i~~ly~ 696 (696)
T PLN02387 666 TPESGLVTAALKLKREQIRKKFKDDLKKLYE 696 (696)
T ss_pred CCCCCcCChhhhhhhHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999996
No 4
>PLN02614 long-chain acyl-CoA synthetase
Probab=100.00 E-value=7.8e-93 Score=814.70 Aligned_cols=624 Identities=32% Similarity=0.570 Sum_probs=512.4
Q ss_pred CCCCccccccCCCCccccccCCCCCCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHH
Q 004977 58 GGEPGYAIRNAQIPELVEVPWKGASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVF 137 (721)
Q Consensus 58 ~~~~r~~~~~~~~~~~~~~~~~~~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~ 137 (721)
++.+|+......+ ..+.+...|+.++|+++++++||++|+++++.. ++. .+.++++||+||.
T Consensus 25 ~~~~~~~~~~~~~----~~~~~~~~t~~~~l~~~a~~~pd~~al~~~~~~--------~~~------~~~~~~~Ty~el~ 86 (666)
T PLN02614 25 GPVYRSIFAKDGF----PNPIEGMDSCWDVFRMSVEKYPNNPMLGRREIV--------DGK------PGKYVWQTYQEVY 86 (666)
T ss_pred CCcccCccccccc----CCCCCCCCcHHHHHHHHHHhCCCCCeEEEeccc--------CCC------CCCcEEeEHHHHH
Confidence 4555555443332 224566789999999999999999999864211 221 1345679999999
Q ss_pred HHHHHHHHHHHhCCCCCCCEEEEEccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccchhHHH
Q 004977 138 DRACSFASGLVNFGHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLS 217 (721)
Q Consensus 138 ~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 217 (721)
++++++|++|+++|+++||+|+|+++|++||++++|||+++|+++||+++.++++++.++|++++++++|++.+....+.
T Consensus 87 ~~v~~lA~~L~~~Gv~~Gd~Vai~~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~ 166 (666)
T PLN02614 87 DIVIKLGNSLRSVGVKDEAKCGIYGANSPEWIISMEACNAHGLYCVPLYDTLGAGAVEFIISHSEVSIVFVEEKKISELF 166 (666)
T ss_pred HHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEecCCCCHHHHHHHHhccCCCEEEECHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999887654443
Q ss_pred hhhh-cCCCccEEEEecCCCCCccCCccCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEeccCCCCCcchheec
Q 004977 218 AVSS-SLKTIKNVIYFENDGSEKDSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMIT 296 (721)
Q Consensus 218 ~~~~-~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~s 296 (721)
.... ..+.++.++.++........ .....+....+++++...+...........++|+|+|+|||||||.||||++|
T Consensus 167 ~~~~~~~~~l~~vi~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~I~yTSGTTG~PKGV~lt 244 (666)
T PLN02614 167 KTCPNSTEYMKTVVSFGGVSREQKE--EAETFGLVIYAWDEFLKLGEGKQYDLPIKKKSDICTIMYTSGTTGDPKGVMIS 244 (666)
T ss_pred HhcccccccceEEEEeCCCChHHhh--hhhhcCcEEEEHHHHHhhcccCCCCCCCCCCCceEEEEEcCCCCCCCcEEEEe
Confidence 3222 12346677776532110000 00001234567888776543222222334689999999999999999999999
Q ss_pred cHHHHHHHHHHHhhC----CCCCCCcEEEeccChHHHHHHHHHHHHHHhcceEeeC--ccccccccchhhccCccCccee
Q 004977 297 HGNIVATAAAIKTLI----PNPGRSDVYLAYLPLAHVLELAAESIMLCAGCAIGYG--STLTMTDTSSKIKKGTKGDVSV 370 (721)
Q Consensus 297 h~~l~~~~~~~~~~~----~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~~~~--~~~~~~~~~~~~~~~~~~~i~~ 370 (721)
|+|+++.+.+....+ ..+.++|++++++|++|++++...+.+++.|+++++. ++..+.+. +++
T Consensus 245 h~nl~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~~~~~~~~~~l~~G~~v~~~~~~~~~~~~~-----------i~~ 313 (666)
T PLN02614 245 NESIVTLIAGVIRLLKSANAALTVKDVYLSYLPLAHIFDRVIEECFIQHGAAIGFWRGDVKLLIED-----------LGE 313 (666)
T ss_pred cHHHHHHHHHHHhhccccccCCCCCcEEEEeccHHHHHHHHHHHHHHHhCCEEEEeCCCHHHHHHH-----------HHH
Confidence 999998877665443 1467899999999999999987666678899999883 34444444 999
Q ss_pred ecceEEeechHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEE
Q 004977 371 LKPTLMAAVPAIFDRVREGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFM 450 (721)
Q Consensus 371 ~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v 450 (721)
++||+++++|++|+.+.+.+.......+.+++++|+++++.+...++... ......++++.++++++++.++++||.+
T Consensus 314 ~~~T~~~~vP~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~lg~~lr~~ 391 (666)
T PLN02614 314 LKPTIFCAVPRVLDRVYSGLQKKLSDGGFLKKFVFDSAFSYKFGNMKKGQ--SHVEASPLCDKLVFNKVKQGLGGNVRII 391 (666)
T ss_pred hCCeEEEecHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHcCC--CCcccchHHHHHHHHHHHHHhCCcEEEE
Confidence 99999999999999999887777776777888999999888776654211 1123456888999999999999999999
Q ss_pred EecCCCCCHHHHHHHHHhhCCccccccccccccccccccCCCC-CCCCccCCCcCcceEEEEecCCCCcccCCCCCCcce
Q 004977 451 ICGGAPLSADSQRFINICMGAPIGQAYGLTETCAGSTFSEWDD-PSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGE 529 (721)
Q Consensus 451 ~~gG~~l~~~~~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~~-~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GE 529 (721)
++||+++++++.++++...+++++++||+||+++.++...+.+ .+.+++|+|+||++++|+|+++++..+ +++|+.||
T Consensus 392 ~~Gga~l~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~gsvG~p~pg~evki~d~~~~~~~~-~~~g~~GE 470 (666)
T PLN02614 392 LSGAAPLASHVESFLRVVACCHVLQGYGLTESCAGTFVSLPDELDMLGTVGPPVPNVDIRLESVPEMEYDA-LASTPRGE 470 (666)
T ss_pred EEcCCCCCHHHHHHHHHhcCCCEEeeCchHhhhhheeeeccccCCcCCcccCcCCceEEEEeeecccCccc-CCCCCCce
Confidence 9999999998766665543589999999999987655443332 245899999999999999855443322 45789999
Q ss_pred EEEccccccccccCCCcccccccccCCCCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCccc
Q 004977 530 IVVGGFNVTAGYFNNPGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYV 609 (721)
Q Consensus 530 l~v~g~~v~~gY~~~~~~t~~~f~~~~~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V 609 (721)
|+|+||+++.|||++|+.|+++| .| |||+|||+|++|+||+|+|+||+||+||+++|+||+|.|||++|.+||+|
T Consensus 471 l~vrGp~v~~GY~~~pe~T~~~f---~d--Gw~~TGDlg~~d~dG~l~i~gR~kd~ik~~~G~~V~p~eIE~~l~~~p~V 545 (666)
T PLN02614 471 ICIRGKTLFSGYYKREDLTKEVL---ID--GWLHTGDVGEWQPNGSMKIIDRKKNIFKLSQGEYVAVENIENIYGEVQAV 545 (666)
T ss_pred EEEcCCcccccccCCHHHhhhhh---cc--CCcccceEEEEcCCCCEEEEEcchhceecCCCeeecHHHHHHHHhcCCCe
Confidence 99999999999999999999999 56 89999999999999999999999999998789999999999999999999
Q ss_pred ceEEEEecCCCceEEEEEEcChHHHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCC
Q 004977 610 DNIMIHADPFHNYCVALVVPSHKALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEP 689 (721)
Q Consensus 610 ~~~~V~g~~~~~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~ 689 (721)
.+|+|+|++.+.+++|+|+|+.+.+..|+++.++.. ++.++|+++++++.+.+++.+.+++.+|+.|+++++|.+++++
T Consensus 546 ~~~~V~g~~~~~~l~alvv~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~e~i~~~~l~~~~ 624 (666)
T PLN02614 546 DSVWVYGNSFESFLVAIANPNQQILERWAAENGVSG-DYNALCQNEKAKEFILGELVKMAKEKKMKGFEIIKAIHLDPVP 624 (666)
T ss_pred eEEEEEecCCcceEEEEEeCCHHHHHHHHHhcCCCc-CHHHHhcCHHHHHHHHHHHHHHHHHcCCCCcceeeEEEEeCCC
Confidence 999999998788999999999999999999888874 6889999999999999999998876889999999999999999
Q ss_pred CCCCCCccCcccccChHHHHHHHHHHHHhhhC
Q 004977 690 WTPEAGLVTAALKIKREQLKAKFKDDLQMLYQ 721 (721)
Q Consensus 690 ~~p~~~~~t~~gKi~R~~l~~~~~~~i~~~Y~ 721 (721)
|++++|++|+++|++|+.+.+.|+++|++||+
T Consensus 625 f~~~ng~lTpt~K~kR~~i~~~y~~~i~~ly~ 656 (666)
T PLN02614 625 FDMERDLLTPTFKKKRPQLLKYYQSVIDEMYK 656 (666)
T ss_pred CCCcCCcCCHhhhhhHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999995
No 5
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.3e-91 Score=801.76 Aligned_cols=613 Identities=21% Similarity=0.347 Sum_probs=511.6
Q ss_pred CCCCccccccCCCCccccccCCCCCCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHH
Q 004977 58 GGEPGYAIRNAQIPELVEVPWKGASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVF 137 (721)
Q Consensus 58 ~~~~r~~~~~~~~~~~~~~~~~~~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~ 137 (721)
+++||.....+. .+|....|+.++|.++++++|+++|+++.+ +|. .|+++||+|+.
T Consensus 43 ~~~~~~~~~~~~------~~~~~~~~l~~~l~~~~~~~p~~~Al~~~~----------~g~--------~~~~~Ty~el~ 98 (746)
T PTZ00342 43 SSVYCMKDHKKK------SSLYVYKHIMKLLLEKYKLNNNKIAIVEHS----------CGE--------PQNYITYGNFF 98 (746)
T ss_pred CCceecCchhhc------ccccccchHHHHHHHHHhhcCCceeEeccC----------CCC--------CceeeeHHHHH
Confidence 667774443322 667778999999999999999999997531 221 35689999999
Q ss_pred HHHHHHHHHHHhC---CCCCC-----------CEEEEEccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCc
Q 004977 138 DRACSFASGLVNF---GHNVD-----------TRAAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQV 203 (721)
Q Consensus 138 ~~v~~lA~~L~~~---Gv~~g-----------d~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~ 203 (721)
++++++|++|.++ |+++| |+|+|+++|++||+++++||+++|+++||++++++++++.++|+++++
T Consensus 99 ~~v~~~A~~L~~~~~~Gv~~g~~~~~~~~g~~d~V~i~~~N~~ew~~~~lA~~~~Gav~Vpl~~~~~~~el~~il~~s~~ 178 (746)
T PTZ00342 99 KKVLSFSHSLNTYEGKGIPEKKYNEEQNNGKFKLLGLYGSNSINWLVADLACMLSGVTTLVMHSKFSIDVIVDILNETKL 178 (746)
T ss_pred HHHHHHHHHHHHHhhcCCCcCccccccccccccEEEEEcCCCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHhcCCC
Confidence 9999999999974 99999 999999999999999999999999999999999999999999999999
Q ss_pred eEEEECccchhHHHhhhhcCCCccEEEEecCCCCCcc----------------CC-------------------------
Q 004977 204 TTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEKD----------------SG------------------------- 242 (721)
Q Consensus 204 ~~vi~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~----------------~~------------------------- 242 (721)
+++|++.+..+.+......+|.++.+++++....... ..
T Consensus 179 ~~lv~~~~~~~~l~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (746)
T PTZ00342 179 EWLCLDLDLVEGLLERKNELPHLKKLIILDTLIKSKEININKEEKNNGSNVNNNGNKNNKEEQKGNDLSNELEDISLGPL 258 (746)
T ss_pred CEEEEcHHHHHHHHHhhccCCCceEEEEECCCCccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 9999988888888777778889999999875321100 00
Q ss_pred ------------cc--CCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHHHHHHH
Q 004977 243 ------------VS--GGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIK 308 (721)
Q Consensus 243 ------------~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~ 308 (721)
+. ....+.....|+++..... .........++|+|+|+|||||||.||||++||+|+++.+....
T Consensus 259 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~dd~a~IiYTSGTTG~PKGVmlTH~nl~~~~~~~~ 337 (746)
T PTZ00342 259 EYDKEKLEKIKDLKEKAKKLGISIILFDDMTKNKT-TNYKIQNEDPDFITSIVYTSGTSGKPKGVMLSNKNLYNTVVPLC 337 (746)
T ss_pred ccchhhhhhhHHHHHHhhcCCCEEEEHHHHHhhcc-cCCCCCCCCccceEEEEEcCCCCCCCCEEEEccHHHHHHHHHHh
Confidence 00 0001223344555544321 11222345789999999999999999999999999999887665
Q ss_pred hhC-CCCCCCcEEEeccChHHHHHHHHHHHHHHhcceEeeC--ccccccccchhhccCccCcceeecceEEeechHHHHH
Q 004977 309 TLI-PNPGRSDVYLAYLPLAHVLELAAESIMLCAGCAIGYG--STLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDR 385 (721)
Q Consensus 309 ~~~-~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~~~~--~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~ 385 (721)
... ....+.|++++++|++|++++...+.+++.|+++++. ++..+.+. +++++||+++++|++|++
T Consensus 338 ~~~~~~~~~~d~~ls~LPL~Hi~~~~~~~~~l~~G~~i~~~~~~~~~l~~d-----------i~~~~pT~~~~VP~v~~~ 406 (746)
T PTZ00342 338 KHSIFKKYNPKTHLSYLPISHIYERVIAYLSFMLGGTINIWSKDINYFSKD-----------IYNSKGNILAGVPKVFNR 406 (746)
T ss_pred hcccccCCCCCeEEEeCcHHHHHHHHHHHHHHHcCCEEEEeCCCHHHHHHH-----------HHHhCCcEEEchHHHHHH
Confidence 432 0233568999999999999998778889999999983 45555555 999999999999999999
Q ss_pred HHHHHHHHHHhhcchhhHHHHHHHHHHHHhhhccccccCCchhhhHHHH--HHHHHHHHhCCcEEEEEecCCCCCHHHHH
Q 004977 386 VREGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAI--VFKSVRAVLGGRIRFMICGGAPLSADSQR 463 (721)
Q Consensus 386 l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~lr~v~~gG~~l~~~~~~ 463 (721)
|.+.+..+....+.+++.+|++++..+..... +...++++.+ +++++++.+|++||.+++||+++++++.+
T Consensus 407 i~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~-------~~~~~~~~~~~~v~~kir~~lg~~lr~~~sGGapl~~~~~~ 479 (746)
T PTZ00342 407 IYTNIMTEINNLPPLKRFLVKKILSLRKSNNN-------GGFSKFLEGITHISSKIKDKVNPNLEVILNGGGKLSPKIAE 479 (746)
T ss_pred HHHHHHHHHhhcCHHHHHHHHHHHHHHHHhhc-------CCcchHHHHHHHHHHHHHHhhCCCeEEEEEcCCCCCHHHHH
Confidence 99988888888888999999999988877543 2234566665 79999999999999999999999999999
Q ss_pred HHHHhhCCccccccccccccccccccCCCCCCCCccCCCc-CcceEEEEecCCCCcccCCCCCCcceEEEcccccccccc
Q 004977 464 FINICMGAPIGQAYGLTETCAGSTFSEWDDPSVGRVGPPV-PCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYF 542 (721)
Q Consensus 464 ~~~~~~g~~l~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~-p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~ 542 (721)
+++..+|++++++||+||+++.++.....+.+.+++|+|+ |+++++|+|+++.... ..++.|||+|+||++|.|||
T Consensus 480 ~~~~~~g~~i~~gYGlTEt~~~~~~~~~~~~~~gsvG~p~~pg~e~ki~d~~~~~~~---~~~~~GEl~vrGp~v~~GY~ 556 (746)
T PTZ00342 480 ELSVLLNVNYYQGYGLTETTGPIFVQHADDNNTESIGGPISPNTKYKVRTWETYKAT---DTLPKGELLIKSDSIFSGYF 556 (746)
T ss_pred HHHHhcCCCEEEeeccCcccceeeeccCCCCCcccccCcCCCcEEEEEecccccccC---CCCCceEEEEecCccccccc
Confidence 9998899999999999999877766666666779999998 9999999986643222 24467999999999999999
Q ss_pred CCCcccccccccCCCCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcccceEEEEecCCCce
Q 004977 543 NNPGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYVDNIMIHADPFHNY 622 (721)
Q Consensus 543 ~~~~~t~~~f~~~~~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~~~ 622 (721)
++|++|+++|. .| |||+|||+|++|+||+|+|+||+||+||+++|++|+|.+||++|.+||.|.+|+|+|++...+
T Consensus 557 ~~pe~T~~~f~--~d--GW~~TGDig~~d~dG~l~i~gR~kdlIkls~Ge~I~p~eIE~~l~~~p~V~~~~VvG~~~~~~ 632 (746)
T PTZ00342 557 LEKEQTKNAFT--ED--GYFKTGDIVQINKNGSLTFLDRSKGLVKLSQGEYIETDMLNNLYSQISFINFCVVYGDDSMDG 632 (746)
T ss_pred CChhhhhhhcC--cC--CcccCCcEEEECCCCeEEEEccCCCeEEeCCCEEEchHHHHHHHhcCCCccEEEEEccCCccc
Confidence 99999999996 57 999999999999999999999999999988899999999999999999999999999876779
Q ss_pred EEEEEEcChHHHHHHHHHh------CCCcccHHH-----HhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCCCC
Q 004977 623 CVALVVPSHKALEKWAHEA------SIKYEDLSE-----LCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEPWT 691 (721)
Q Consensus 623 ~~a~vv~~~~~~~~~~~~~------~~~~~~~~~-----~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~~~ 691 (721)
++|+|+|+.+.+.+|+++. +++..++.+ .++++++.+.+.+++.+..++.+|++|+++++|.+++++|+
T Consensus 633 ~~Alvv~d~~~~~~~a~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~e~i~~~~l~~~~~t 712 (746)
T PTZ00342 633 PLAIISVDKYLLFKCLKDDNMLESTGINEKNYLEKLTDETINNNIYVDYVKGKMLEVYKKTNLNRYNIINDIYLTSKVWD 712 (746)
T ss_pred cEEEEECCHHHHHHHHHhcCCccccccCcccHHHHhhhhhhccHHHHHHHHHHHHHHHHHhCCccceeeeeEEEecCCCC
Confidence 9999999999999999864 444445555 45667889999999999987679999999999999999999
Q ss_pred CCCCccCcccccChHHHHHHHH---HHHHhhhC
Q 004977 692 PEAGLVTAALKIKREQLKAKFK---DDLQMLYQ 721 (721)
Q Consensus 692 p~~~~~t~~gKi~R~~l~~~~~---~~i~~~Y~ 721 (721)
| ++++|++.|++|+.+.+.|+ +.|+++|+
T Consensus 713 ~-~~~lTpt~KlkR~~v~~~y~~~i~~i~~~y~ 744 (746)
T PTZ00342 713 T-NNYLTPTFKVKRFYVFKDYAFFIDQVKKIYK 744 (746)
T ss_pred C-CCccChhhhhhHHHHHHHHHHHHHHHHHHhc
Confidence 9 56899999999999999999 66678885
No 6
>PLN02736 long-chain acyl-CoA synthetase
Probab=100.00 E-value=4.5e-91 Score=802.52 Aligned_cols=607 Identities=35% Similarity=0.624 Sum_probs=522.9
Q ss_pred CCCCCCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCCCE
Q 004977 78 WKGASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTR 157 (721)
Q Consensus 78 ~~~~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~ 157 (721)
.+...|++++|+++++++|+++|+.++... ++. .+.++++||+||.++++++|++|+++|+++||+
T Consensus 40 ~~~~~tl~~~l~~~a~~~p~~~al~~~~~~--------~~~------~~~~~~lTy~el~~~v~~lA~~L~~~Gv~~gd~ 105 (651)
T PLN02736 40 HPEIGTLHDNFVYAVETFRDYKYLGTRIRV--------DGT------VGEYKWMTYGEAGTARTAIGSGLVQHGIPKGAC 105 (651)
T ss_pred CCCCCCHHHHHHHHHHhCCCCCeEEEEecC--------CCC------CCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCCE
Confidence 356689999999999999999999764210 222 235678999999999999999999999999999
Q ss_pred EEEEccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccchhHHHhhhhcCCCccEEEEecCCCC
Q 004977 158 AAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGS 237 (721)
Q Consensus 158 V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~ 237 (721)
|+|+++|++||+++++||+++|+++||+++.++++++.++|++++++++|++.+..+.+......++.++.++..+....
T Consensus 106 Vai~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~ 185 (651)
T PLN02736 106 VGLYFINRPEWLIVDHACSAYSYVSVPLYDTLGPDAVKFIVNHAEVAAIFCVPQTLNTLLSCLSEIPSVRLIVVVGGADE 185 (651)
T ss_pred EEEEcCCCHHHHHHHHHHHHcCCeEEEeecCCCHHHHHHHHhccCCCEEEECHHHHHHHHHHhhcCCCceEEEEECCCch
Confidence 99999999999999999999999999999999999999999999999999998887777777777888888887653211
Q ss_pred CccCCccCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHHHHHHHhhCCCCCCC
Q 004977 238 EKDSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNPGRS 317 (721)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~ 317 (721)
.. ..+. ...+....+++++...............++|+|+|+|||||||.||||++||+|+++.+.+....+ .+.++
T Consensus 186 ~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~IlyTSGTTG~PKGV~lsh~~l~~~~~~~~~~~-~~~~~ 262 (651)
T PLN02736 186 PL-PSLP-SGTGVEIVTYSKLLAQGRSSPQPFRPPKPEDVATICYTSGTTGTPKGVVLTHGNLIANVAGSSLST-KFYPS 262 (651)
T ss_pred hh-hhhh-ccCCcEEEEHHHHHHhcccCCCCCCCCCccceEEEEEcCCCCCCCcEEEEecHHHHHHHHHHHhcc-CCCCC
Confidence 00 0000 001245678888876543332223445789999999999999999999999999999998888777 88999
Q ss_pred cEEEeccChHHHHHHHHHHHHHHhcceEeeCc--cccccccchhhccCccCcceeecceEEeechHHHHHHHHHHHHHHH
Q 004977 318 DVYLAYLPLAHVLELAAESIMLCAGCAIGYGS--TLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVE 395 (721)
Q Consensus 318 d~~l~~~pl~h~~g~~~~~~~l~~G~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~ 395 (721)
|++++++|++|++++...+.+++.|+++++.+ +..+.+. +++++||+++++|++++.+.+.......
T Consensus 263 d~~l~~lPl~h~~~~~~~~~~l~~G~~i~~~~~~~~~~~~~-----------i~~~~~t~~~~vP~~~~~l~~~~~~~~~ 331 (651)
T PLN02736 263 DVHISYLPLAHIYERVNQIVMLHYGVAVGFYQGDNLKLMDD-----------LAALRPTIFCSVPRLYNRIYDGITNAVK 331 (651)
T ss_pred CEEEEeCCHHHHHHHHHHHHHHHcCCEEEEeCCCHHHHHHH-----------HHHhCCcEEecchHHHHHHHHHHHHHHh
Confidence 99999999999999988888899999998843 3334444 9999999999999999999998888888
Q ss_pred hhcchhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHHHHHHHhhCCcccc
Q 004977 396 EKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMGAPIGQ 475 (721)
Q Consensus 396 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~~~~~~g~~l~~ 475 (721)
..+.+++++++++++.+...+... ..+.+.++.+++++++..+|+++|.+++||+++++++.++++..+|+++++
T Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~lg~~lr~~~~gGa~l~~~~~~~~~~~~g~~~~~ 406 (651)
T PLN02736 332 ESGGLKERLFNAAYNAKKQALENG-----KNPSPMWDRLVFNKIKAKLGGRVRFMSSGASPLSPDVMEFLRICFGGRVLE 406 (651)
T ss_pred cccHHHHHHHHHHHHHHHHHHHcC-----CCCCchHHHHHHHHHHHHhcCcEEEEEeCCCCCCHHHHHHHHHHhCCCeEE
Confidence 888899999999888766554311 122346788889999999999999999999999999999999888999999
Q ss_pred ccccccccccccccCCCCCCCCccCCCcCcceEEEEecCCCCcccCCCCCCcceEEEccccccccccCCCcccccccccC
Q 004977 476 AYGLTETCAGSTFSEWDDPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVD 555 (721)
Q Consensus 476 ~YG~TE~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~ 555 (721)
+||+||+++.++.....+...+++|+|+|+++++|+|.+++.+...+.+++.|||+|+||+++.|||++|+.|+++|.
T Consensus 407 ~YG~TE~~~~~~~~~~~~~~~~~vG~p~pg~~v~i~d~~~~~~~~~~~~~~~GEl~vrgp~v~~GY~~~~~~t~~~~~-- 484 (651)
T PLN02736 407 GYGMTETSCVISGMDEGDNLSGHVGSPNPACEVKLVDVPEMNYTSEDQPYPRGEICVRGPIIFKGYYKDEVQTREVID-- 484 (651)
T ss_pred EechHHhchheeccCCCCCCCCccCCccCceEEEEEEccccCcccCCCCCCCceEEecCCccccccccCHHHHHhhhc--
Confidence 999999987776655555567899999999999999965544433345667899999999999999999999999996
Q ss_pred CCCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcccceEEEEecCCCceEEEEEEcChHHHH
Q 004977 556 ERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYVDNIMIHADPFHNYCVALVVPSHKALE 635 (721)
Q Consensus 556 ~~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~~~~~a~vv~~~~~~~ 635 (721)
.| |||+|||+|++|+||+|+|+||+||+||+++|++|+|.|||++|.+||+|.+|+|+|....+.++|+|+++++.+.
T Consensus 485 ~d--gw~~TGDlg~~d~dG~l~i~GR~kd~ik~~~G~~V~p~eIE~~l~~~p~V~~a~V~g~~~~~~~~A~vv~~~~~~~ 562 (651)
T PLN02736 485 ED--GWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYIAPEKIENVYAKCKFVAQCFVYGDSLNSSLVAVVVVDPEVLK 562 (651)
T ss_pred cC--CCeeccceEEEcCCCcEEEEEechhheEcCCCcEechHHHHHHHhcCCCeeEEEEEecCCCceeEEEEEeCHHHHH
Confidence 56 9999999999999999999999999999878999999999999999999999999997656789999999999999
Q ss_pred HHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCCCCCCCCccCcccccChHHHHHHHHHH
Q 004977 636 KWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEPWTPEAGLVTAALKIKREQLKAKFKDD 715 (721)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~~~p~~~~~t~~gKi~R~~l~~~~~~~ 715 (721)
.|++..+++..++.++|+++++++.+.++|.+.+++++|+.|++|++|++++++|++++|++|++||++|++|++.|+++
T Consensus 563 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~lT~~~Ki~R~~i~~~~~~~ 642 (651)
T PLN02736 563 AWAASEGIKYEDLKQLCNDPRVRAAVLADMDAVGREAQLRGFEFAKAVTLVPEPFTVENGLLTPTFKVKRPQAKAYFAKA 642 (651)
T ss_pred HHHHHcCCCccCHHHHhcCHHHHHHHHHHHHHHHHhcCCCcceeeeEEEEeCCCCcCCCCcCChhhhhhHHHHHHHHHHH
Confidence 99998888877899999999999999999999988679999999999999999999999999999999999999999999
Q ss_pred HHhhhC
Q 004977 716 LQMLYQ 721 (721)
Q Consensus 716 i~~~Y~ 721 (721)
|++||+
T Consensus 643 i~~~y~ 648 (651)
T PLN02736 643 ISDMYA 648 (651)
T ss_pred HHHHHh
Confidence 999995
No 7
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=1.3e-90 Score=797.23 Aligned_cols=622 Identities=31% Similarity=0.563 Sum_probs=514.8
Q ss_pred CCCCccccccCCCCccccccCCCCCCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHH
Q 004977 58 GGEPGYAIRNAQIPELVEVPWKGASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVF 137 (721)
Q Consensus 58 ~~~~r~~~~~~~~~~~~~~~~~~~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~ 137 (721)
++++|+....+.+. .. .+...|++++|+++++++|+++|++.+... ++. .++++++||+|+.
T Consensus 23 ~~~~~~~~~~~~~~---~~-~~~~~t~~~~l~~~~~~~p~~~al~~~~~~--------~~~------~g~~~~~Ty~el~ 84 (660)
T PLN02861 23 GPVYRSIYAKDGLL---DL-PADIDSPWQFFSDAVKKYPNNQMLGRRQVT--------DSK------VGPYVWLTYKEVY 84 (660)
T ss_pred CCcccccccccccc---cC-CCCCCCHHHHHHHHHHhCCCCCeEEEEecC--------CCC------CCCceEEEHHHHH
Confidence 66677766555422 22 256689999999999999999999865211 221 2456789999999
Q ss_pred HHHHHHHHHHHhCCCCCCCEEEEEccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccchhHHH
Q 004977 138 DRACSFASGLVNFGHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLS 217 (721)
Q Consensus 138 ~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 217 (721)
++++++|++|.++|+++||+|+|+++|++||++++|||+++|+++|||+++++.+++.++|++++++++|++.+..+.+.
T Consensus 85 ~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~v~~~~~~~~~~~ 164 (660)
T PLN02861 85 DAAIRIGSAIRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQGITYVPLYDTLGANAVEFIINHAEVSIAFVQESKISSIL 164 (660)
T ss_pred HHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHcCCCCEEEECHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999887766665
Q ss_pred hhhhcCC-CccEEEEecCCCCCccCCccCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEeccCCCCCcchheec
Q 004977 218 AVSSSLK-TIKNVIYFENDGSEKDSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMIT 296 (721)
Q Consensus 218 ~~~~~~~-~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~s 296 (721)
.....++ .++.++.++......... ....+....+++++...+... .......++|+|+|+|||||||.||||++|
T Consensus 165 ~~~~~~~~~l~~ii~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dd~a~i~yTSGTTG~PKGV~lt 241 (660)
T PLN02861 165 SCLPKCSSNLKTIVSFGDVSSEQKEE--AEELGVSCFSWEEFSLMGSLD-CELPPKQKTDICTIMYTSGTTGEPKGVILT 241 (660)
T ss_pred HhhhhCCCCCEEEEEECCCChhhhhh--hhcCCcEEEEHHHHHHhCccc-CCCCccCCCceEEEEecCCCCCCCCEEEEe
Confidence 5444443 577788775432110000 000123456788876544321 112344689999999999999999999999
Q ss_pred cHHHHHHHHHHHhhCC----CCCCCcEEEeccChHHHHHHHHHHHHHHhcceEeeC--ccccccccchhhccCccCccee
Q 004977 297 HGNIVATAAAIKTLIP----NPGRSDVYLAYLPLAHVLELAAESIMLCAGCAIGYG--STLTMTDTSSKIKKGTKGDVSV 370 (721)
Q Consensus 297 h~~l~~~~~~~~~~~~----~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~~~~--~~~~~~~~~~~~~~~~~~~i~~ 370 (721)
|+|+++.+......+. .+.++|++++++|++|++++...+.+++.|+++++. ++..+.+. +++
T Consensus 242 h~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~~~~~~~~~~l~~G~~v~~~~~~~~~~~~~-----------i~~ 310 (660)
T PLN02861 242 NRAIIAEVLSTDHLLKVTDRVATEEDSYFSYLPLAHVYDQVIETYCISKGASIGFWQGDIRYLMED-----------VQA 310 (660)
T ss_pred cHHHHHHHHHHHhccccccccCCCCCEEEEECcHHHHHHHHHHHHHHHhCCEEEEeCCCHHHHHHH-----------HHH
Confidence 9999998877655441 147889999999999999987766789999999873 44444444 999
Q ss_pred ecceEEeechHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEE
Q 004977 371 LKPTLMAAVPAIFDRVREGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFM 450 (721)
Q Consensus 371 ~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v 450 (721)
++||+++++|++|+.+.+....+....+.++++||+++++.++..++.... .....+.++.++++++++.+|+++|.+
T Consensus 311 ~~~T~~~~vP~~~~~l~~~~~~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~r~~lg~~lr~~ 388 (660)
T PLN02861 311 LKPTIFCGVPRVYDRIYTGIMQKISSGGMLRKKLFDFAYNYKLGNLRKGLK--QEEASPRLDRLVFDKIKEGLGGRVRLL 388 (660)
T ss_pred hCCcEEeechHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHhcCCC--CcCccHhHHHHHHHHHHHHhCCcEEEE
Confidence 999999999999999999888888888889999999999998887652211 112245778889999999999999999
Q ss_pred EecCCCCCHHHHHHHHHhhC-CccccccccccccccccccCCCC-CCCCccCCCcCcceEEEEecCCCCcccCCCCCCcc
Q 004977 451 ICGGAPLSADSQRFINICMG-APIGQAYGLTETCAGSTFSEWDD-PSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRG 528 (721)
Q Consensus 451 ~~gG~~l~~~~~~~~~~~~g-~~l~~~YG~TE~~~~~~~~~~~~-~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~G 528 (721)
++||+++++++.++++ .++ ..++|+||+||+++.++...... ...+++|+|+|+++++|+|.++.++.. ..+++.|
T Consensus 389 ~~Ggapl~~~~~~~~~-~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~gsvG~p~p~~ev~i~d~~~~g~~~-~~~~~~G 466 (660)
T PLN02861 389 LSGAAPLPRHVEEFLR-VTSCSVLSQGYGLTESCGGCFTSIANVFSMVGTVGVPMTTIEARLESVPEMGYDA-LSDVPRG 466 (660)
T ss_pred EECCCCCCHHHHHHHH-HHcCCCeeEecchhhhhhceeecccccCCCCCCccCccCceEEEEEEccccCccc-CCCCCce
Confidence 9999999999876655 455 47999999999987655443322 246899999999999999854433222 2356789
Q ss_pred eEEEccccccccccCCCcccccccccCCCCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcc
Q 004977 529 EIVVGGFNVTAGYFNNPGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDY 608 (721)
Q Consensus 529 El~v~g~~v~~gY~~~~~~t~~~f~~~~~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~ 608 (721)
||+|+||+++.|||++|+.|+++| .| |||+|||+|++|+||+|+|+||+||+||+++|+||+|.|||++|.+||.
T Consensus 467 Ei~vrGp~v~~GY~~~pe~T~~~f---~d--Gw~~TGDlg~~d~dG~l~i~GR~kd~Ik~~~G~~I~p~eIE~~l~~~p~ 541 (660)
T PLN02861 467 EICLRGNTLFSGYHKRQDLTEEVL---ID--GWFHTGDIGEWQPNGAMKIIDRKKNIFKLSQGEYVAVENLENTYSRCPL 541 (660)
T ss_pred eEEEcCCcccccccCCHHHHHhhh---hc--cCcccCceEEECCCCcEEEEeccccceEcCCCeEEcHHHHHHHHhcCCC
Confidence 999999999999999999999999 56 8999999999999999999999999999878999999999999999999
Q ss_pred cceEEEEecCCCceEEEEEEcChHHHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCC
Q 004977 609 VDNIMIHADPFHNYCVALVVPSHKALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPE 688 (721)
Q Consensus 609 V~~~~V~g~~~~~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~ 688 (721)
|.+|+|+|.++.++++|+|+++.+.+..|+++.+.. .++.++|++++....+.+++.+.+++..|+.|++++++.+.++
T Consensus 542 V~~a~V~G~~~~~~~~A~vv~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~e~i~~~~l~~~ 620 (660)
T PLN02861 542 IASIWVYGNSFESFLVAVVVPDRQALEDWAANNNKT-GDFKSLCKNLKARKYILDELNSTGKKLQLRGFEMLKAIHLEPN 620 (660)
T ss_pred eeEEEEEecCCcceeEEEEEcCHHHHHHHHHHcCCC-CCHHHHhcCHHHHHHHHHHHHHHHHHcCCCCcceeeEEEEeCC
Confidence 999999999877899999999999999999977654 3578899999999999999999998668999999999999999
Q ss_pred CCCCCCCccCcccccChHHHHHHHHHHHHhhhC
Q 004977 689 PWTPEAGLVTAALKIKREQLKAKFKDDLQMLYQ 721 (721)
Q Consensus 689 ~~~p~~~~~t~~gKi~R~~l~~~~~~~i~~~Y~ 721 (721)
+|++++|++|+++|++|+++.+.|+++|++||+
T Consensus 621 ~ft~~ng~lT~t~K~~R~~i~~~y~~~I~~lY~ 653 (660)
T PLN02861 621 PFDIERDLITPTFKLKRPQLLKYYKDCIDQLYS 653 (660)
T ss_pred CCCcccCcCCHHHhhhHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999995
No 8
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=100.00 E-value=5.3e-91 Score=757.18 Aligned_cols=585 Identities=32% Similarity=0.536 Sum_probs=497.1
Q ss_pred CCCCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEE
Q 004977 80 GASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAA 159 (721)
Q Consensus 80 ~~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~ 159 (721)
...++..++.+.++.+|+.+|+.... .+.|+.+||+|+.+++.++|++|++.|+..||+|+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~a~~~~~-------------------~~~~~~~ty~e~~~~v~~~a~gL~~lg~~~gdrva 74 (613)
T COG1022 14 EIHTLPKRLAERVKDRPDGVALMYKE-------------------LGGWEAITYRELYERVRALASGLLSLGIPAGDRVA 74 (613)
T ss_pred hcccHHHHHHHHhhcCCcceeEeeec-------------------CCcceEeeHHHHHHHHHHHHHHHHhcCCCCCCEEE
Confidence 45789999999999999988887642 35678999999999999999999999997799999
Q ss_pred EEccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccch-hHHHhhhhcCCCccEEEEecC---C
Q 004977 160 ILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQL-KKLSAVSSSLKTIKNVIYFEN---D 235 (721)
Q Consensus 160 i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~-~~~~~~~~~~~~~~~ii~~~~---~ 235 (721)
|++.|+++|+++.+||+.+|++.||++++.+++++.++|++++++++|++.... +.+..+...++.+..++.... .
T Consensus 75 i~a~nr~eW~i~d~a~~~~g~v~Vp~y~t~~~~~~~~iL~~se~~~i~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (613)
T COG1022 75 IFAANRPEWAIADLAILALGAVSVPIYSTSTPEQLAYILNESESKVIFVENQELLDLVLPVLEDCPKVVDLIVIIDLVRE 154 (613)
T ss_pred EEeCCCHHHHHHHHHHHHcCCeEEecCCCCCHHHHHHHHhcCCceEEEecchHHHHHHHhhhccccchhhhhhhhhhhhh
Confidence 999999999999999999999999999999999999999999999999998554 555545444443222221111 0
Q ss_pred CCC-ccCCccCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHHHHHHHhhCCC-
Q 004977 236 GSE-KDSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPN- 313 (721)
Q Consensus 236 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~- 313 (721)
... ....+... .......+ .+.. ........++.+||+|.|+|||||||.|||||+||+|+++++..+...+ .
T Consensus 155 ~~~~~~~~~~~~-~~~~~~~~-~~~~--~~~~~~~~~~~~dDlatiiYTSGTTG~PKGVmLth~N~~~~v~~~~~~~-~~ 229 (613)
T COG1022 155 AVEAKALVLEVF-PDEGISLF-LIDS--AGLEGRIAPPKPDDLATIIYTSGTTGTPKGVMLTHRNLLAQVAGIDEVL-PP 229 (613)
T ss_pred ccchhhcccccc-ccccchhh-hhcc--cccccccCCCCccceEEEEEcCCCCCCCceEEEehHHHHHHHHHHHhhC-CC
Confidence 000 00000000 00011111 1111 1111122567899999999999999999999999999999999999998 6
Q ss_pred CCCCcEEEeccChHHHHHHHH-HHHHHHhcceEee-CccccccccchhhccCccCcceeecceEEeechHHHHHHHHHHH
Q 004977 314 PGRSDVYLAYLPLAHVLELAA-ESIMLCAGCAIGY-GSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVV 391 (721)
Q Consensus 314 ~~~~d~~l~~~pl~h~~g~~~-~~~~l~~G~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~ 391 (721)
.+++|++++++|++|++.+.+ ....+..|+++.+ .++..+.+. +++++||+|++||.+|+.+.+.+.
T Consensus 230 ~~~~d~~LsfLPlaHi~Er~~~~~~~~~~g~~~~~~~~~~~~~~d-----------l~~~rPt~m~~VPRvwE~i~~~I~ 298 (613)
T COG1022 230 IGPGDRVLSFLPLAHIFERAFEGGLALYGGVTVLFKEDPRTLLED-----------LKEVRPTVMIGVPRVWEKVYKGIM 298 (613)
T ss_pred CCCCcEEEEeCcHHHHHHHHHHHHHHhhcceEEEecCCHHHHHHH-----------HHHhCCeEEeechHHHHHHHHHHH
Confidence 899999999999999999987 5556666666665 667777766 999999999999999999999999
Q ss_pred HHHHhhcchhhHHHHHHHHHHHHhhhccccccC-CchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHHHHHHHhhC
Q 004977 392 KKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAW-GLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMG 470 (721)
Q Consensus 392 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~~~~~~g 470 (721)
+++...+..++++|+++++.+.........+.. .......|+++|+++++.+|+++|++++||++|++++..+++. +|
T Consensus 299 ~kv~~~~~~~~~if~~a~~~~~~~~~~~~~~~~~~~~~~~~d~LVf~Kir~~lGgri~~~~sGGa~l~~~~~~f~~~-lG 377 (613)
T COG1022 299 EKVAKAPAVRRKLFRWALKVAYKKISRALLGGGPLSWLLVADRLVFRKIRDALGGRIRYALSGGAPLSPELLHFFRS-LG 377 (613)
T ss_pred HHHHhcchhHHHHHHHHHHHHHHHHHhhhcccCCcchhhhhhHHHHHHHHHHhCCcEEEEEecCCcCCHHHHHHHHH-cC
Confidence 999999999999999999886543321111111 1122358999999999999999999999999999999999997 48
Q ss_pred CccccccccccccccccccCCCCCCCCccCCCcCcceEEEEecCCCCcccCCCCCCcceEEEccccccccccCCCccccc
Q 004977 471 APIGQAYGLTETCAGSTFSEWDDPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSE 550 (721)
Q Consensus 471 ~~l~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~ 550 (721)
+++.++||+|||+++++++++.....+++|+|+|++++||+| .|||+||||+||+|||+||++|++
T Consensus 378 i~i~eGYGlTEts~~~~v~~~~~~~~gtvG~p~p~~evKI~d--------------~GEilVRG~~Vm~GYyk~pe~Tae 443 (613)
T COG1022 378 IPILEGYGLTETSAVVSVNPPDRFVLGTVGKPLPGIEVKIAD--------------DGEILVRGPNVMKGYYKNPEATAE 443 (613)
T ss_pred CCeEEEecccccccceEEccccCcccCCcCCcCCCceEEEcc--------------CceEEEecchhcchhcCChHHHhh
Confidence 999999999999999999999999999999999999999997 399999999999999999999999
Q ss_pred ccccCCCCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcccceEEEEecCCCceEEEEEEcC
Q 004977 551 VYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYVDNIMIHADPFHNYCVALVVPS 630 (721)
Q Consensus 551 ~f~~~~~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~~~~~a~vv~~ 630 (721)
+|+ +| |||+|||+|.+|++|+|.|+||+||+||+++|+||+|+.||+.+.++|.|.+++|+| +++.+++|+|+|+
T Consensus 444 af~--~D--GWf~TGDlg~~d~~g~L~i~gRkK~~i~l~~GknIaP~~IE~~l~~~~~I~qi~vvg-~~k~~~~AlIvp~ 518 (613)
T COG1022 444 AFT--ED--GWFRTGDLGELDEDGYLVITGRKKELIKLSNGKNIAPEPIESKLAKSPLIEQICVVG-DDKKFLVALIVPD 518 (613)
T ss_pred hcc--cc--CCcccCceeEEcCCCcEEEeecccceEECCCCcccChHHHHHHHhcCCCeeEEEEEe-cCCcceEEEEeCC
Confidence 998 78 999999999999999999999999999999999999999999999999999999999 7788999999999
Q ss_pred hHHHHHHHHHhC-CCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCCCCCCCCccCcccccChHHHH
Q 004977 631 HKALEKWAHEAS-IKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEPWTPEAGLVTAALKIKREQLK 709 (721)
Q Consensus 631 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~~~p~~~~~t~~gKi~R~~l~ 709 (721)
.+.+.+|++..+ ....+..+++.++++.+.+...+....+ ++..++.++.+.+.+..|+++++.+|++.|++|..+.
T Consensus 519 ~~~l~~~a~~~~~~~~~~~~~l~~~~~l~~~~~~~i~~~~~--~~~~~E~i~~~~~~~~~~t~~~~~~t~t~klkR~~i~ 596 (613)
T COG1022 519 FDALEKWAESLNKVISASREELARDPKLLKLILPRVNKGNK--RLFGFEQIKKFVLLPKEFTPENGELTPTLKLKRHVIL 596 (613)
T ss_pred HHHHHHHHHhccccccCCHHHHhhCHHHHHHHHHHHHHHhh--cccchhhhheeeecccccccccCccccchhhhHHHHH
Confidence 999999999766 3346788999999999999999998886 5599999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhC
Q 004977 710 AKFKDDLQMLYQ 721 (721)
Q Consensus 710 ~~~~~~i~~~Y~ 721 (721)
+.|+++|+.+|.
T Consensus 597 ~~~~~~i~~~y~ 608 (613)
T COG1022 597 DRYKDEIEAVYS 608 (613)
T ss_pred HhhhhHHHHHhh
Confidence 999999999984
No 9
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=3.9e-89 Score=783.24 Aligned_cols=624 Identities=32% Similarity=0.570 Sum_probs=521.0
Q ss_pred CCCCccccccCCCCccccccCCCCCCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHH
Q 004977 58 GGEPGYAIRNAQIPELVEVPWKGASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVF 137 (721)
Q Consensus 58 ~~~~r~~~~~~~~~~~~~~~~~~~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~ 137 (721)
++.+|+....+.++. ..+..+|++++|++.++++|+++|+.++... ++. .++++++||+|+.
T Consensus 22 ~~~~~~~~~~~~~~~----~~~~~~t~~~~~~~~~~~~p~~~al~~~~~~--------~~~------~~~~~~~Ty~el~ 83 (660)
T PLN02430 22 GPVYRNLLSKKGFPP----IDSDITTAWDIFSKSVEKYPDNKMLGWRRIV--------DGK------VGPYMWKTYKEVY 83 (660)
T ss_pred CCccccccccccccC----CCCCCCCHHHHHHHHHHhCCCCceEEEEecC--------CCC------CCCcEEEEHHHHH
Confidence 566666554334221 2256789999999999999999999875311 222 2456789999999
Q ss_pred HHHHHHHHHHHhCCCCCCCEEEEEccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccch-hHH
Q 004977 138 DRACSFASGLVNFGHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQL-KKL 216 (721)
Q Consensus 138 ~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~-~~~ 216 (721)
++++++|++|.+.|+++||+|+|+++|++||+++++||+++|+++||+++.++++++.++|++++++++|++.... ..+
T Consensus 84 ~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~ew~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~ 163 (660)
T PLN02430 84 EEVLQIGSALRASGAEPGSRVGIYGSNCPQWIVAMEACAAHSLICVPLYDTLGPGAVDYIVDHAEIDFVFVQDKKIKELL 163 (660)
T ss_pred HHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEEeccCCCHHHHHHHHhccCCCEEEECHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999987643 333
Q ss_pred HhhhhcCCCccEEEEecCCCCCccCCccCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEeccCCCCCcchheec
Q 004977 217 SAVSSSLKTIKNVIYFENDGSEKDSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMIT 296 (721)
Q Consensus 217 ~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~s 296 (721)
.......+.++.++.++........ .....+....+|+++...+...+.......++|+++|+|||||||.||||++|
T Consensus 164 ~~~~~~~~~l~~ii~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~iiyTSGTTG~PKGV~lt 241 (660)
T PLN02430 164 EPDCKSAKRLKAIVSFTSVTEEESD--KASQIGVKTYSWIDFLHMGKENPSETNPPKPLDICTIMYTSGTSGDPKGVVLT 241 (660)
T ss_pred hhhcccCCCceEEEEECCCChHHhh--hhhcCCcEEEEHHHHHHhhccCCCCCCCcCcCceEEEEECCCCCCCCCEEEee
Confidence 3333345677888887643211100 00011345678888876654333333445689999999999999999999999
Q ss_pred cHHHHHHHHHHHhhC----CCCCCCcEEEeccChHHHHHHHHHHHHHHhcceEeeC--ccccccccchhhccCccCccee
Q 004977 297 HGNIVATAAAIKTLI----PNPGRSDVYLAYLPLAHVLELAAESIMLCAGCAIGYG--STLTMTDTSSKIKKGTKGDVSV 370 (721)
Q Consensus 297 h~~l~~~~~~~~~~~----~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~~~~--~~~~~~~~~~~~~~~~~~~i~~ 370 (721)
|+|++..+.+..... ..++++|++++++|++|++++...+.++..|+++++. ++..+.+. +++
T Consensus 242 h~~~~~~~~~~~~~~~~~~~~~~~~d~~ls~lPl~H~~~~~~~~~~l~~G~~i~~~~~~~~~l~~~-----------l~~ 310 (660)
T PLN02430 242 HEAVATFVRGVDLFMEQFEDKMTHDDVYLSFLPLAHILDRMIEEYFFRKGASVGYYHGDLNALRDD-----------LME 310 (660)
T ss_pred cHHHHHHHHHHHhhccccccCCCCCCEEEEeCcHHHHHHHHHHHHHHHcCCEEEEeCCChhhHHHH-----------HHH
Confidence 999998877654321 1467899999999999999987766778999999873 33344444 899
Q ss_pred ecceEEeechHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEE
Q 004977 371 LKPTLMAAVPAIFDRVREGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFM 450 (721)
Q Consensus 371 ~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v 450 (721)
++||++.++|.+|+.+.+.+.......+++++.+|+++++.+...++.... .....++++.+++++++..+|+++|.+
T Consensus 311 ~~pt~~~~vP~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~d~l~~~~i~~~~G~~lr~~ 388 (660)
T PLN02430 311 LKPTLLAGVPRVFERIHEGIQKALQELNPRRRLIFNALYKYKLAWMNRGYS--HKKASPMADFLAFRKVKAKLGGRLRLL 388 (660)
T ss_pred hCCcEEEecHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHhcCCC--CCCcchhHHHHHHHHHHHHhCCeEEEE
Confidence 999999999999999999888888777889999999999999887753221 122456889999999999999999999
Q ss_pred EecCCCCCHHHHHHHHHhhCCccccccccccccccccccCCCC-CCCCccCCCcCcceEEEEecCCCCcccCCCCCCcce
Q 004977 451 ICGGAPLSADSQRFINICMGAPIGQAYGLTETCAGSTFSEWDD-PSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGE 529 (721)
Q Consensus 451 ~~gG~~l~~~~~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~~-~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GE 529 (721)
++||+++++++.++++...+++++++||+||+++.++...+.+ ...+++|+|.|+++++|+|.++.++.+ .+.++.||
T Consensus 389 ~~gga~l~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~gsvG~p~~~~evki~d~~~~g~~~-~~~~~~GE 467 (660)
T PLN02430 389 ISGGAPLSTEIEEFLRVTSCAFVVQGYGLTETLGPTTLGFPDEMCMLGTVGAPAVYNELRLEEVPEMGYDP-LGEPPRGE 467 (660)
T ss_pred EECCCCCCHHHHHHHHHhcCCCeeeecchhhhhhceEeeccccCCCCCCccCCCCceEEEEEEcCCcCccc-CCCCCcce
Confidence 9999999999988887654578999999999988766554433 346899999999999999865555443 34556899
Q ss_pred EEEccccccccccCCCcccccccccCCCCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCccc
Q 004977 530 IVVGGFNVTAGYFNNPGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYV 609 (721)
Q Consensus 530 l~v~g~~v~~gY~~~~~~t~~~f~~~~~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V 609 (721)
|+|+||+++.|||++|+.|+++| .| |||+|||+|++|+||+|+|+||+||+||+++|++|+|++||++|.+||.|
T Consensus 468 i~vrg~~v~~GY~~~~e~t~~~~---~d--Gw~~TGDig~~d~dG~l~i~gR~kd~ik~~~G~~V~p~~IE~~l~~~p~V 542 (660)
T PLN02430 468 ICVRGKCLFSGYYKNPELTEEVM---KD--GWFHTGDIGEILPNGVLKIIDRKKNLIKLSQGEYVALEYLENVYGQNPIV 542 (660)
T ss_pred EEecCCCccccccCChHHhhhhh---hc--cceeccceEEECCCCcEEEEEcccccEEcCCCcEEchHHHHHHHhcCCCe
Confidence 99999999999999999999998 67 89999999999999999999999999998889999999999999999999
Q ss_pred ceEEEEecCCCceEEEEEEcChHHHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCC
Q 004977 610 DNIMIHADPFHNYCVALVVPSHKALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEP 689 (721)
Q Consensus 610 ~~~~V~g~~~~~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~ 689 (721)
.+|+|+|+....+++|+|+++++.+..|++..+.. .+..++++++++++.+.+++.+.+++.+|+.|+++++|.+.+++
T Consensus 543 ~~~~V~G~~~~~~~~A~vv~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~i~~~~~~~~l~~~e~i~~~~l~~~~ 621 (660)
T PLN02430 543 EDIWVYGDSFKSMLVAVVVPNEENTNKWAKDNGFT-GSFEELCSLPELKEHILSELKSTAEKNKLRGFEYIKGVILETKP 621 (660)
T ss_pred eEEEEEecCCcceEEEEEEcCHHHHHHHHHhCCCC-CCHHHHhcCHHHHHHHHHHHHHHHHHhCCCCceeeeEEEEECCC
Confidence 99999998766899999999999999999988776 35888999999999999999999876789999999999999999
Q ss_pred CCCCCCccCcccccChHHHHHHHHHHHHhhhC
Q 004977 690 WTPEAGLVTAALKIKREQLKAKFKDDLQMLYQ 721 (721)
Q Consensus 690 ~~p~~~~~t~~gKi~R~~l~~~~~~~i~~~Y~ 721 (721)
|++++|++|+++|++|+.+.+.|+++|++||+
T Consensus 622 ~~~~~g~lT~t~K~~R~~i~~~y~~~i~~ly~ 653 (660)
T PLN02430 622 FDVERDLVTATLKKRRNNLLKYYQVEIDEMYR 653 (660)
T ss_pred CCCcCCcCChhhhhhhHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999995
No 10
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.5e-88 Score=785.18 Aligned_cols=620 Identities=33% Similarity=0.581 Sum_probs=516.0
Q ss_pred cCCCCCCHHHHHHHHHHhCCCCCceeeeeecccccccc--CCCc--cceeccCCCcEEeeHHHHHHHHHHHHHHHHhCCC
Q 004977 77 PWKGASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTA--SDGR--KFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGH 152 (721)
Q Consensus 77 ~~~~~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~--~dg~--~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv 152 (721)
.|+...|++++|+++++++||++|+++++....+.... .+|+ .|.....++++++||+||.++++++|++|.++|+
T Consensus 64 ~~~~~~t~~~~~~~~~~~~p~~~a~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lTy~el~~~~~~lA~~L~~~Gv 143 (700)
T PTZ00216 64 EWYYGPNFLQRLERICKERGDRRALAYRPVERVEKEVVKDADGKERTMEVTHFNETRYITYAELWERIVNFGRGLAELGL 143 (700)
T ss_pred ccCCCCCHHHHHHHHHHhCCCCCeEEEeccccccccccccCCCccccccccccCCceEeEHHHHHHHHHHHHHHHHHhCC
Confidence 34566899999999999999999999874221111000 0221 1223334567899999999999999999999999
Q ss_pred CCCCEEEEEccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccchhHHHhhhhc--CCCccEEE
Q 004977 153 NVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSS--LKTIKNVI 230 (721)
Q Consensus 153 ~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~--~~~~~~ii 230 (721)
++||+|+|+++|++||+++++||+++|++++|+++.++++++.++|++++++++|++......+...... .+.. .++
T Consensus 144 ~~gd~V~i~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~lv~~~~~~~~l~~~~~~~~~~~~-~ii 222 (700)
T PTZ00216 144 TKGSNVAIYEETRWEWLASIYGIWSQSMVAATVYANLGEDALAYALRETECKAIVCNGKNVPNLLRLMKSGGMPNT-TII 222 (700)
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEeeCCCCCHHHHHhhhhccCccEEEECHHHHHHHHHhhhhccCCce-EEE
Confidence 9999999999999999999999999999999999999999999999999999999998766555443322 2333 455
Q ss_pred EecCCCCCccCCccCCCCCceEeeHHHHHhcCCC--CCC-CCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHHHHHH
Q 004977 231 YFENDGSEKDSGVSGGISNWTVSSFSEVEKLGKR--SPV-DPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAI 307 (721)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~ 307 (721)
.++...... ...+..+.+|+++...+.. ... ......++|+|+|+|||||||.||||++||+|+++.+.+.
T Consensus 223 ~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~nl~~~~~~~ 296 (700)
T PTZ00216 223 YLDSLPASV------DTEGCRLVAWTDVVAKGHSAGSHHPLNIPENNDDLALIMYTSGTTGDPKGVMHTHGSLTAGILAL 296 (700)
T ss_pred EECCCcccc------ccCCceEEEHHHHHHhCCccccccccCCCCCcccEEEEEEeCCCCCcCcEEEEEhHHHHHHHHHH
Confidence 555422110 0124567889998776521 111 1234468999999999999999999999999999988776
Q ss_pred HhhC----CCCCCCcEEEeccChHHHHHHHHHHHHHHhcceEeeCccccccccchhhccCccCcceeecceEEeechHHH
Q 004977 308 KTLI----PNPGRSDVYLAYLPLAHVLELAAESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIF 383 (721)
Q Consensus 308 ~~~~----~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~ 383 (721)
...+ ..+.++|++++++|++|++++.....++..|+++++.++..+.+. ......++++++||++.++|++|
T Consensus 297 ~~~~~~~~~~~~~~d~~ls~lPl~H~~~~~~~~~~l~~G~~v~~~~~~~l~~~----~~~~~~~l~~~~pT~~~~vP~~~ 372 (700)
T PTZ00216 297 EDRLNDLIGPPEEDETYCSYLPLAHIMEFGVTNIFLARGALIGFGSPRTLTDT----FARPHGDLTEFRPVFLIGVPRIF 372 (700)
T ss_pred HhhcccccCCCCCCCEEEEEChHHHHHHHHHHHHHHHcCCEEEECCHHHhhhh----hccccchHHHcCCcEEEechHHH
Confidence 5443 124688999999999999998776667888998888766655543 11112248899999999999999
Q ss_pred HHHHHHHHHHHHhhcchhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHHH
Q 004977 384 DRVREGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQR 463 (721)
Q Consensus 384 ~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~ 463 (721)
+.+.+.........+.+++++|++++..++..+. .+...++++.++|+++++.+|+++|.+++||+++++++.+
T Consensus 373 ~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~------~~~~~~~~~~~v~~~~~~~~g~~lr~i~~GGa~l~~~~~~ 446 (700)
T PTZ00216 373 DTIKKAVEAKLPPVGSLKRRVFDHAYQSRLRALK------EGKDTPYWNEKVFSAPRAVLGGRVRAMLSGGGPLSAATQE 446 (700)
T ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHH------cCCCCchHHHHHHHHHHHHhCCcEEEEEECCCCCCHHHHH
Confidence 9999988877777788999999999998887665 2334568899999999999999999999999999999999
Q ss_pred HHHHhhCCccccccccccccccccccCCCCCCCCccCCCcCcceEEEEecCCCCcccCCCCCCcceEEEccccccccccC
Q 004977 464 FINICMGAPIGQAYGLTETCAGSTFSEWDDPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFN 543 (721)
Q Consensus 464 ~~~~~~g~~l~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~ 543 (721)
+++..++ +++|+||+||+++.++.....+...+++|+|+||++++|+|.++. ...+.+++.|||+|+||+++.|||+
T Consensus 447 ~~~~~~~-~l~~~YG~TEt~~~~~~~~~~~~~~~svG~p~~g~evkI~d~~~~--~~~~~~~~~GEL~vrG~~v~~GY~~ 523 (700)
T PTZ00216 447 FVNVVFG-MVIQGWGLTETVCCGGIQRTGDLEPNAVGQLLKGVEMKLLDTEEY--KHTDTPEPRGEILLRGPFLFKGYYK 523 (700)
T ss_pred HHHHHhh-hHhhccCcccccccccccCCCCCCCCCcCCcCCCeEEEEeechhh--ccCCCCCCCceEEEcCCcccchhcC
Confidence 9988888 999999999998777666555556789999999999999995431 1224466789999999999999999
Q ss_pred CCcccccccccCCCCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcccce--EEEEecCCCc
Q 004977 544 NPGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYVDN--IMIHADPFHN 621 (721)
Q Consensus 544 ~~~~t~~~f~~~~~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~~--~~V~g~~~~~ 621 (721)
+|+.|+++|. .| |||+|||+|++|+||+|+|+||+||+||+.+|++|+|++||++|.+||.|.+ ++|++.+++.
T Consensus 524 ~pe~T~~~f~--~d--Gw~~TGDig~~d~dG~l~i~GR~kd~ik~~~G~~I~p~eIE~~l~~~p~V~~~~~~v~~~~~~~ 599 (700)
T PTZ00216 524 QEELTREVLD--ED--GWFHTGDVGSIAANGTLRIIGRVKALAKNCLGEYIALEALEALYGQNELVVPNGVCVLVHPARS 599 (700)
T ss_pred ChhHhhhhcc--cc--CCeeccceEEEcCCCcEEEEEehHhheecCCCceeccHHHHHHHhcCcCcccceEEEEEecCCc
Confidence 9999999997 66 8999999999999999999999999999667999999999999999999997 5777777788
Q ss_pred eEEEEEEcChHHHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCCCCCCCCccCccc
Q 004977 622 YCVALVVPSHKALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEPWTPEAGLVTAAL 701 (721)
Q Consensus 622 ~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~~~p~~~~~t~~g 701 (721)
+++|+|+++.+....|+++.++. .++.++|+++++.+.+.+++.+.+++.+|.+|++|++|.+++++|++++|++|+++
T Consensus 600 ~l~a~vv~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~e~i~~~~~~~~~f~~~~g~lT~t~ 678 (700)
T PTZ00216 600 YICALVLTDEAKAMAFAKEHGIE-GEYPAILKDPEFQKKATESLQETARAAGRKSFEIVRHVRVLSDEWTPENGVLTAAM 678 (700)
T ss_pred eEEEEEecCHHHHHHHHHHcCCC-CCHHHHhcCHHHHHHHHHHHHHHHHhcCCCCceeEeEEEEECCCCCCCCCCCChhh
Confidence 99999999999999999988876 46889999999999999999999887899999999999999999999999999999
Q ss_pred ccChHHHHHHHHHHHHhhhC
Q 004977 702 KIKREQLKAKFKDDLQMLYQ 721 (721)
Q Consensus 702 Ki~R~~l~~~~~~~i~~~Y~ 721 (721)
|++|+++.+.|++.|++||+
T Consensus 679 K~~R~~i~~~y~~~i~~ly~ 698 (700)
T PTZ00216 679 KLKRRVIDERYADLIKELFA 698 (700)
T ss_pred ccchHHHHHHHHHHHHHHhc
Confidence 99999999999999999996
No 11
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=100.00 E-value=6.6e-81 Score=624.19 Aligned_cols=511 Identities=24% Similarity=0.325 Sum_probs=434.5
Q ss_pred CCCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEE
Q 004977 81 ASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAI 160 (721)
Q Consensus 81 ~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i 160 (721)
..|+.++++..+++.||+.|+++.. .|. ++||+|+.+.++++|++|..+|+++||||++
T Consensus 49 ~~Tigq~l~~~t~~v~dkea~Vf~~----------eg~-----------R~Tf~~~~~ev~slAaGll~lGL~kGDrVgv 107 (596)
T KOG1177|consen 49 SETIGQLLETTTERVPDKEAAVFDH----------EGI-----------RLTFSEFVSEVESLAAGLLSLGLKKGDRVGV 107 (596)
T ss_pred cccHHHHHHHHhhccCcceEEEEee----------ccc-----------hhhHHHHHHHHHHHHhhHHhhcCCCCCEEEE
Confidence 4899999999999999999999853 443 5999999999999999999999999999999
Q ss_pred EccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccch-----hHHHhhh-------------hc
Q 004977 161 LAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQL-----KKLSAVS-------------SS 222 (721)
Q Consensus 161 ~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~-----~~~~~~~-------------~~ 222 (721)
+.||+.+|+..+|||.++|.+.|++||.+..+++++.|++.+++++|+.+.+. +.+.++. ..
T Consensus 108 wgpN~~~w~l~~lA~A~AG~v~v~~NP~Yq~~elr~~L~k~~~k~l~~p~~~k~~ny~~~l~~icPEv~~~~~G~lkS~~ 187 (596)
T KOG1177|consen 108 WGPNSYEWVLCQLACARAGLVLVNLNPAYQSEELRYVLKKVGCKALFAPPQFKTQNYYETLLEICPEVMRGDPGQLKSEL 187 (596)
T ss_pred ecCChHHHHHHHHHHHHhceEEeccCcccccHHHHHHHhhcCeEEEEccchhhhchHHHHHHHhhHHhhcCCCccccccc
Confidence 99999999999999999999999999999999999999999999999986542 2222222 24
Q ss_pred CCCccEEEEecCCCCCccCCccCCCCCceEeeHHHHHhcCCCCCCC-----CCCCCCCCeEEEEeccCCCCCcchheecc
Q 004977 223 LKTIKNVIYFENDGSEKDSGVSGGISNWTVSSFSEVEKLGKRSPVD-----PSLPSQNGVAVIMYTSGSTGLPKGVMITH 297 (721)
Q Consensus 223 ~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~d~a~i~~TSGTTG~PKgV~~sh 297 (721)
+|.++++|..+++.. ......++|+.+.+...... .....|||++.|.|||||||.|||+.+||
T Consensus 188 lp~lthvi~~~ed~~-----------~~Ga~~~sev~~~~s~~~~a~l~~~~k~~~pdd~~niQFTSGTTG~PKgatLsH 256 (596)
T KOG1177|consen 188 LPELTHVILADEDHP-----------LPGAFLLSEVLKAASKEERAKLADMSKWLSPDDAVNIQFTSGTTGAPKGATLSH 256 (596)
T ss_pred cccceEEEecCCCCc-----------CCCceehHHHHHhcchHHHHHHHhhhhhcCCCCceEEEeccCCCCCCcceeeeh
Confidence 678888888774432 23456788887766553221 14457899999999999999999999999
Q ss_pred HHHHHHHHHHHhhCCCCCCCcEEEeccChHHHHHHHH-HHHHHHhcceEeeCccccccccchhhccCccCcceeecceEE
Q 004977 298 GNIVATAAAIKTLIPNPGRSDVYLAYLPLAHVLELAA-ESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLM 376 (721)
Q Consensus 298 ~~l~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l 376 (721)
.|++++.......+ ++..+++++...|++|.+|... .+.+|..|+|+++++|.... +..+.+|+++++|.+
T Consensus 257 ~~~~Nna~~vg~r~-g~~e~~~i~~~~Pl~H~~G~~~~~ma~l~~gat~Vfp~~~f~~-------k~alqai~~ekcT~l 328 (596)
T KOG1177|consen 257 YNFLNNARAVGARA-GYNEKHRICIPNPLYHCFGCVLGVMAALMHGATIVFPAPSFDP-------KDALQAISNEKCTTL 328 (596)
T ss_pred hhhhhhHHHHHHHh-CcCcceEEEecCchHHHHHHHHHHHHHHHhCcEEEeeCCCCCh-------HHHHHHHHhhceEEE
Confidence 99999999999998 9999999999999999999654 78899999999994433221 222333999999999
Q ss_pred eechHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCC
Q 004977 377 AAVPAIFDRVREGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAP 456 (721)
Q Consensus 377 ~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~ 456 (721)
+++|+++..|++.... .++..+++|.++.||++
T Consensus 329 ~gtPtM~~Dlln~~~~-----------------------------------------------~~~~~s~lr~~vigGa~ 361 (596)
T KOG1177|consen 329 YGTPTMFVDLLNIPQK-----------------------------------------------QQVDLSSLRKGVIGGAP 361 (596)
T ss_pred ecChHHHHHHhcchhh-----------------------------------------------ccCchhhhhhheeCCCC
Confidence 9999999999864322 22233689999999999
Q ss_pred CCHHHHHHHHHhhCC-ccccccccccccccccccCCCCC---CCCccCCCcCcceEEEEecCCCCcccCCCCCCcceEEE
Q 004977 457 LSADSQRFINICMGA-PIGQAYGLTETCAGSTFSEWDDP---SVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVV 532 (721)
Q Consensus 457 l~~~~~~~~~~~~g~-~l~~~YG~TE~~~~~~~~~~~~~---~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v 532 (721)
+|+++.+.+.+.+++ .+..+||+|||+++.+.....+. +..++|+.+++.+.+|+| .+|...+ .|..||||+
T Consensus 362 ~s~eLlk~iv~~~~m~~i~v~YG~TEts~v~~~~~~~D~~~~~~ksVG~~m~h~Ea~iv~-~~g~~v~---~~~~Gel~i 437 (596)
T KOG1177|consen 362 VSPELLKLIVNQMNMKDIAVAYGLTETSPVLFMSLLGDPPEERIKSVGHLMDHYEAAIVD-KDGSEVP---LGTKGELLI 437 (596)
T ss_pred CCHHHHHHHHHhhCceeeEEEeeccccCcceeeecCCCCHHHHHhhhhhccccccccccc-CCCCccc---cCCCceEEE
Confidence 999999999887765 47789999999988887766554 347999999999999999 6665544 667899999
Q ss_pred ccccccccccCCCcccccccccCCCCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcccceE
Q 004977 533 GGFNVTAGYFNNPGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYVDNI 612 (721)
Q Consensus 533 ~g~~v~~gY~~~~~~t~~~f~~~~~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~~~ 612 (721)
||++.|.|||+++++|.+... .| +||+|||+|.+|++|+++|+||.||+|+ +||++|+|.|||+.|.+||.|.++
T Consensus 438 RGY~tMl~Ywg~~~kT~eti~--~d--rW~~TGDi~~m~enG~i~iVGRskdmI~-rGGENVyP~ElE~fL~~hp~V~~a 512 (596)
T KOG1177|consen 438 RGYSTMLGYWGEEEKTKETIG--ND--RWYDTGDIAVMDENGTIEIVGRSKDMII-RGGENVYPTELEDFLNKHPLVKEA 512 (596)
T ss_pred EechhheeecCCcccchhhcc--cc--cceecCceEEEcCCCcEEEEEcccCeEE-eCCcccChHHHHHHHhhCCCeeeE
Confidence 999999999999999999976 66 9999999999999999999999999998 799999999999999999999999
Q ss_pred EEEecCCCc---eEEEEEEcChHHHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCC
Q 004977 613 MIHADPFHN---YCVALVVPSHKALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEP 689 (721)
Q Consensus 613 ~V~g~~~~~---~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~ 689 (721)
.|+|++|++ .++|+|-+..+... +...++|+++|+ ++|.+|++|+.|+++++.
T Consensus 513 ~VVGV~D~R~GE~VCA~vRLqe~~e~-----------------------~~t~E~lKa~Ck-~klaHFKiPky~vf~~~F 568 (596)
T KOG1177|consen 513 HVVGVPDERLGEEVCACVRLQEGAEG-----------------------KTTAETLKAMCK-GKLAHFKIPKYFVFVDEF 568 (596)
T ss_pred EEEccCCCcccceEEEEEEeeccccc-----------------------cccHHHHHHHHh-cccccccCCcEEEEeccC
Confidence 999999885 48888888765411 122489999999 999999999999999995
Q ss_pred CCCCCCccCcccccChHHHHHHHHHHHH
Q 004977 690 WTPEAGLVTAALKIKREQLKAKFKDDLQ 717 (721)
Q Consensus 690 ~~p~~~~~t~~gKi~R~~l~~~~~~~i~ 717 (721)
| +|-+|||+|-+++++.+.++.
T Consensus 569 --P----lT~tGKIqKFeir~~~k~~l~ 590 (596)
T KOG1177|consen 569 --P----LTTTGKIQKFEIREMSKGHLG 590 (596)
T ss_pred --c----ccccccchhHHHHHHHHhhcc
Confidence 6 999999999999999997653
No 12
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=1.9e-80 Score=670.10 Aligned_cols=477 Identities=27% Similarity=0.392 Sum_probs=402.6
Q ss_pred EeeHHHHHHHHHHHHHHHHhCC--CCCCCEEEEEccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEE
Q 004977 130 WQTYGEVFDRACSFASGLVNFG--HNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLI 207 (721)
Q Consensus 130 ~~Ty~el~~~v~~lA~~L~~~G--v~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi 207 (721)
.+||+|+.+++.|+|++|.++| +++||+|++++||++++.++++||+.+|+++.|+||.+.+.++.+.+++++++++|
T Consensus 45 ~~T~~e~~~~~~r~A~~L~~~~~~i~~gDvV~i~~pNs~~~~~~~la~~~~Ga~~~~~Np~~~~~ei~~~~~~s~~kiif 124 (537)
T KOG1176|consen 45 ELTYSELHDRCRRLASALSELGLGIKKGDVVGILAPNTPEFVELALAVPMAGAVLNPLNPRLTASEIAKQLKDSKPKLIF 124 (537)
T ss_pred EEcHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEcCCCHHHHHHHHHHHHcCccccccCcccCHHHHHHHHHhcCCeEEE
Confidence 7999999999999999999875 89999999999999999999999999999999999999999999999999999999
Q ss_pred ECccchhHHHhhhhcCCCccEEEEecCCCCCccCCccCCCCCceEee-HHHHHhcCCCCCCCCCCCCCCCeEEEEeccCC
Q 004977 208 CDSKQLKKLSAVSSSLKTIKNVIYFENDGSEKDSGVSGGISNWTVSS-FSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGS 286 (721)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGT 286 (721)
++.+..+.+......+. ..++.+....... .........+ +..+...+.... ..+.+.+|++.|.|||||
T Consensus 125 ~d~~~~~~i~~~~~~~~--~~i~~l~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~dd~~~il~SSGT 195 (537)
T KOG1176|consen 125 VDEDFYDKISEATSKLA--LKIIVLTGDEGVI-----SISDLVEDLDAFEDLMPEGLPDG--IRPVSEDDTAAILYSSGT 195 (537)
T ss_pred EcCchHHHHHHHHhhcC--CceEEEecccCcc-----ccccccccccchhhccccCCCcc--cccCCCCCeEEEecCCCC
Confidence 99999998888776655 3444444321100 0000011111 333333222221 455677999999999999
Q ss_pred CCCcchheeccHHHHHHHHHHHhhCCCCCCCcEEEeccChHHHHHHHHHHHH-HHhcceEee---Cccccccccchhhcc
Q 004977 287 TGLPKGVMITHGNIVATAAAIKTLIPNPGRSDVYLAYLPLAHVLELAAESIM-LCAGCAIGY---GSTLTMTDTSSKIKK 362 (721)
Q Consensus 287 TG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~-l~~G~~~~~---~~~~~~~~~~~~~~~ 362 (721)
||.||||++||+|++.+........ .++..|+.++.+|++|.+|+...+.+ +..|+++++ +++..+++.
T Consensus 196 Tg~PKgV~lsHr~~~~~~~~~~~~~-~~~~~~v~l~~lPl~H~~Gl~~~~~~~~~~~~~ii~~~~f~~~~~~~~------ 268 (537)
T KOG1176|consen 196 TGLPKGVVLSHRNLIANTLSIKIGW-ELTSDDVYLCTLPLFHIYGLITLLLSLLAGGTTIICLRKFDAELFLDL------ 268 (537)
T ss_pred CCCCceEEEecHHHHHHHHHhhhcc-cCCCCceEEEechHHHHhHHHHHHHHHHhCCceEEECCCCCHHHHHHH------
Confidence 9999999999999999988777666 77789999999999999999987775 445555554 466666666
Q ss_pred CccCcceeecceEEeechHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHH
Q 004977 363 GTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAV 442 (721)
Q Consensus 363 ~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (721)
+++|++|+++++|.++..|.+... ....
T Consensus 269 -----i~kykvt~~~~vP~~~~~l~~~p~-----------------------------------------------~~~~ 296 (537)
T KOG1176|consen 269 -----IEKYKVTHLFLVPPVLNMLAKSPI-----------------------------------------------VKKY 296 (537)
T ss_pred -----HHHhCEEEEEcChHHHHHHhcCCc-----------------------------------------------cCcc
Confidence 999999999999999999987421 0112
Q ss_pred hCCcEEEEEecCCCCCHHHHHHHHHhhC-CccccccccccccccccccCCCCC-CCCccCCCcCcceEEEEecCCCCccc
Q 004977 443 LGGRIRFMICGGAPLSADSQRFINICMG-APIGQAYGLTETCAGSTFSEWDDP-SVGRVGPPVPCCYIKLVSWDEGGYKT 520 (721)
Q Consensus 443 ~~~~lr~v~~gG~~l~~~~~~~~~~~~g-~~l~~~YG~TE~~~~~~~~~~~~~-~~~~vG~p~p~~~v~i~d~~~~~~~~ 520 (721)
.++++|.+.+||+++++++.+.+.+.++ ..+.++||+||+++.++.+...+. +++++|++++++.+++.+ ++|..+
T Consensus 297 ~l~sl~~v~~gga~~~~~~~~~~~~~l~~~~v~q~YGmTE~~~~~~~~~~~~e~k~~svG~~~~g~~~~v~~-e~g~~l- 374 (537)
T KOG1176|consen 297 DLSSLRSVLSGGAPLSPATLEKVKERLPNVTVIQGYGMTEAGGLITSNDWGPERKPGSVGRLLPGVRVKVLD-ETGVSL- 374 (537)
T ss_pred cCCccEEEEecCCCCCHHHHHHHHHhCCCceEEEeeccccccCceeecCCCccCcccccCccccceEEEeeC-CCCCCC-
Confidence 3369999999999999999999999998 899999999999988887776664 779999999988888887 777654
Q ss_pred CCCCCCcceEEEccccccccccCCCcccccccccCCCCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHH
Q 004977 521 SDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVE 600 (721)
Q Consensus 521 ~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~~~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE 600 (721)
++++.||||++|++++.|||+||++|++.|. .+ |||||||+|++|+||+|+|+||.||+||. +|++|+|.|||
T Consensus 375 --~~~~~GEI~vrg~~imkGY~~NpeaT~~~~~--~~--GW~~TGDiGy~D~DG~l~IvdR~KdlIk~-~G~qv~P~EiE 447 (537)
T KOG1176|consen 375 --GPNQTGEICVRGPQVMKGYLKNPEATKEAFD--DD--GWFHTGDLGYFDEDGYLYIVDRSKDLIKY-GGEQVSPAEIE 447 (537)
T ss_pred --CCCCceEEEEECcccchhhcCChHHHHhhcc--cC--CccccCceEEEcCCCeEEEecchhhheee-CCEEeCHHHHH
Confidence 5889999999999999999999999999996 55 99999999999999999999999999997 69999999999
Q ss_pred HHHhcCcccceEEEEecCCCc---eEEEEEEcChHHHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCc
Q 004977 601 AALISSDYVDNIMIHADPFHN---YCVALVVPSHKALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKF 677 (721)
Q Consensus 601 ~~l~~~p~V~~~~V~g~~~~~---~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~ 677 (721)
++|.+||.|.||||+|.+|+. .++|+||++++. . ++ .++|.++++ ++|++|
T Consensus 448 ~vL~~hP~V~eaaVvgipDe~~Ge~p~A~VV~k~g~----------~---lt------------e~di~~~v~-k~l~~y 501 (537)
T KOG1176|consen 448 AVLLTHPDVLEAAVVGIPDEVWGETPAAFVVLKKGS----------T---LT------------EKDIIEYVR-KKLPAY 501 (537)
T ss_pred HHHHhCCCccEEEEEcccccccCCcceEEEEecCCC----------c---CC------------HHHHHHHHH-hhCChh
Confidence 999999999999999999885 599999998743 1 11 389999999 999999
Q ss_pred ccccEEEeeCCCCCCCCCccCcccccChHHHHHHHHHH
Q 004977 678 EIPAKIKLMPEPWTPEAGLVTAALKIKREQLKAKFKDD 715 (721)
Q Consensus 678 ~~P~~i~~~~~~~~p~~~~~t~~gKi~R~~l~~~~~~~ 715 (721)
++|+.++|++++ | +|++|||.|+.|++++.+.
T Consensus 502 ~~~~~V~Fvd~l--P----Ks~~GKi~R~~lr~~~~~~ 533 (537)
T KOG1176|consen 502 KLPGGVVFVDEL--P----KTPNGKILRRKLRDIAKKL 533 (537)
T ss_pred hccCeEEEeccC--C----CCCcchHHHHHHHHHHHhc
Confidence 999999999998 6 9999999999999999864
No 13
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=3.9e-76 Score=660.51 Aligned_cols=509 Identities=30% Similarity=0.425 Sum_probs=416.8
Q ss_pred CCCCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEE
Q 004977 80 GASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAA 159 (721)
Q Consensus 80 ~~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~ 159 (721)
...++.++++++++++|+++|+.+. +. . ..+||+||.++++++|+.|++.|+++||+|+
T Consensus 9 ~~~~~~~~l~~~a~~~~~~~a~~~~------------~~-------~--~~~Ty~el~~~~~~~A~~L~~~~v~~gdrVa 67 (534)
T COG0318 9 AELTLASLLERAARRNPDRPALIFL------------GR-------G--GRLTYRELDRRANRLAAALQALGVKPGDRVA 67 (534)
T ss_pred ccccHHHHHHHHHHhCCCceEEEEc------------CC-------C--ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEE
Confidence 4579999999999999999999873 22 0 1499999999999999999999999999999
Q ss_pred EEccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccchhHHHhhhhcCCCccEEEEecCCCCCc
Q 004977 160 ILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEK 239 (721)
Q Consensus 160 i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~ 239 (721)
|+++|++++++++|||+++|++++|+||.+...++.++++++++++++++....+.+..+....+....+..........
T Consensus 68 il~~N~~e~~~~~~a~~~~Gav~vpln~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (534)
T COG0318 68 ILLPNSPEFLIAFLAALRAGAVAVPLNPRLTPRELAYILNDAGAKVLITSAEFAALLEAVAEALPVVLVVLLVGDADDRL 147 (534)
T ss_pred EECCCCHHHHHHHHHHHhcCEEEeecCcccCHHHHHHHHHhcCCeEEEEcccchhHHHHHhccCCcceEEEecccccccc
Confidence 99999999999999999999999999999999999999999999999999886555555554443333333322111000
Q ss_pred cCCccCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHHHHHHHhhCCC--CCCC
Q 004977 240 DSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPN--PGRS 317 (721)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~--~~~~ 317 (721)
. .+++++..............+++|+|+|+|||||||.||||++||+|++.+.......+ . ++++
T Consensus 148 -----------~-~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgv~~th~~~~~~~~~~~~~~-~~~~~~~ 214 (534)
T COG0318 148 -----------P-ITLEALAAEGPGPDADARPVDPDDLAFLLYTSGTTGLPKGVVLTHRNLLANAAGIAAAL-GGGLTPD 214 (534)
T ss_pred -----------c-ccHHHHhhccCCcccccCCCCCCCEEEEEeCCCCCCCCCEeEEecHhHHHHHHHHHHHh-cccCCCC
Confidence 0 24555533222222222226789999999999999999999999999999998888887 6 8999
Q ss_pred cEEEeccChHHHHHHHHHHH-HHHhcceEeeCccccccccchhhccCccCcceeecceEEeechHHHHHHHHHHHHHHHh
Q 004977 318 DVYLAYLPLAHVLELAAESI-MLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEE 396 (721)
Q Consensus 318 d~~l~~~pl~h~~g~~~~~~-~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~ 396 (721)
|++++++|++|++|+...+. .++.|+++++..+..+.. ..++..+.++++|+++++|+++..++++......
T Consensus 215 d~~l~~lPl~H~~Gl~~~~~~~~~~G~~~v~~~~~~f~~------~~~~~~i~~~~~t~~~~vPt~~~~ll~~~~~~~~- 287 (534)
T COG0318 215 DVVLSWLPLFHIFGLIVGLLAPLLGGGTLVLLSPEPFDP------EEVLWLIEKYKVTVLSGVPTFLRELLDNPEKDDD- 287 (534)
T ss_pred ceEEEecChHHHHHHHHHHHHHHHcCCEEEeCCCCCcCH------HHHHHHHHHhcceEEecchHHHHHHHhCCccCcc-
Confidence 99999999999999998555 488999988854322111 1122227888899999999999998764221100
Q ss_pred hcchhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCC-cEEEEEecCCCCCHHHHHHHHHhhC-Cccc
Q 004977 397 KGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGG-RIRFMICGGAPLSADSQRFINICMG-APIG 474 (721)
Q Consensus 397 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~lr~v~~gG~~l~~~~~~~~~~~~g-~~l~ 474 (721)
..+ ++|.+++||+++++++.+.+.+.++ ..++
T Consensus 288 ----------------------------------------------~~~~~lr~~~~gg~~~~~~~~~~~~~~~~~~~i~ 321 (534)
T COG0318 288 ----------------------------------------------DLSSSLRLVLSGGAPLPPELLERFEERFGPIAIL 321 (534)
T ss_pred ----------------------------------------------ccccceEEEEecCCcCCHHHHHHHHHHhCCCceE
Confidence 012 3999999999999999999999887 4799
Q ss_pred cccccccccccccccCCCC--CCCCccCCCcCcceEEEEecCCCCcccCCCCCCcceEEEccccccccccCCCccccccc
Q 004977 475 QAYGLTETCAGSTFSEWDD--PSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVY 552 (721)
Q Consensus 475 ~~YG~TE~~~~~~~~~~~~--~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f 552 (721)
++||+||+++.++.....+ ...+++|+|+|+++++|+|++++.. . +|++|||+|+||+++.|||++|+.|++.|
T Consensus 322 ~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~pg~~v~Ivd~~~~~~---~-pg~vGei~irgp~v~~GY~~~pe~t~~~f 397 (534)
T COG0318 322 EGYGLTETSPVVTINPPDDLLAKPGSVGRPLPGVEVRIVDPDGGEV---L-PGEVGEIWVRGPNVMKGYWNRPEATAEAF 397 (534)
T ss_pred EeecccccCceeecCCCchhhhcCCcccccCCCcEEEEEeCCCCcc---C-CCCceEEEEECchhhhhhcCChHHHHHhh
Confidence 9999999998777776665 3568889999999999999554422 2 37899999999999999999999999988
Q ss_pred ccCCCCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcccceEEEEecCCCc---eEEEEEEc
Q 004977 553 KVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYVDNIMIHADPFHN---YCVALVVP 629 (721)
Q Consensus 553 ~~~~~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~~---~~~a~vv~ 629 (721)
. .+ |||+|||+|++|+||+|+|+||.||+|+. +|+||+|.|||+++.+||.|.+|+|+|.+|+. .++|+|++
T Consensus 398 ~--~~--gW~~TGDlg~~d~~G~l~i~gR~kd~I~~-gG~ni~p~eiE~~l~~~~~V~~aavvgvpd~~~Ge~~~a~v~~ 472 (534)
T COG0318 398 D--ED--GWLRTGDLGYVDEDGYLYIVGRLKDLIIS-GGENIYPEEIEAVLAEHPAVAEAAVVGVPDERWGERVVAVVVL 472 (534)
T ss_pred c--cC--CeeeecceEEEcCCccEEEEeccceEEEe-CCeEECHHHHHHHHHhCCCcceEEEEeCCCCccCceEEEEEEE
Confidence 5 34 89999999999999999999999999995 79999999999999999999999999999873 59999999
Q ss_pred ChHHHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCCCCCCCCccCcccccChHHHH
Q 004977 630 SHKALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEPWTPEAGLVTAALKIKREQLK 709 (721)
Q Consensus 630 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~~~p~~~~~t~~gKi~R~~l~ 709 (721)
+++.. . ....++|.++++ .+++.|++|+.|++++++ | +|++||++|++|+
T Consensus 473 ~~~~~-----------~------------~~~~~~i~~~~~-~~l~~~~~P~~v~~v~~l--P----~t~sGKi~r~~lr 522 (534)
T COG0318 473 KPGGD-----------A------------ELTAEELRAFLR-KRLALYKVPRIVVFVDEL--P----RTASGKIDRRALR 522 (534)
T ss_pred cCCCC-----------C------------CCCHHHHHHHHH-hhhhcccCCeEEEEeCCC--C----CCCchhhhHHHHH
Confidence 86420 0 001378889998 799999999999999998 6 9999999999999
Q ss_pred HHHHH
Q 004977 710 AKFKD 714 (721)
Q Consensus 710 ~~~~~ 714 (721)
+.+.+
T Consensus 523 ~~~~~ 527 (534)
T COG0318 523 EEYRA 527 (534)
T ss_pred HHHHh
Confidence 99987
No 14
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=100.00 E-value=5.4e-76 Score=631.72 Aligned_cols=497 Identities=21% Similarity=0.277 Sum_probs=404.0
Q ss_pred HHHHHHHh-CCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHh-CCCCCCCEEEEEccC
Q 004977 87 LFEQSCKS-HPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVN-FGHNVDTRAAILAET 164 (721)
Q Consensus 87 ~~~~~a~~-~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~-~Gv~~gd~V~i~~~n 164 (721)
.++++... .+|+.|+++.. + .+..+.+||+||.++++++|+.|++ .|+ +||||+|++|+
T Consensus 14 ~~dr~~~~~~~~~~aii~~~------------e------~~~~~~~Ty~~L~~~v~r~A~~L~~~~gv-kGDrV~iymp~ 74 (528)
T COG0365 14 ALDRHLEADRPDDTAIIFDG------------E------DGLFRELTYGDLRREVARLANALKDLGGV-KGDRVAIYMPN 74 (528)
T ss_pred hhhhhhhccCCCceEEEEEc------------C------CCCceEEEHHHHHHHHHHHHHHHHHhCCC-CCCEEEEEcCC
Confidence 46666653 47899999852 1 1112689999999999999999987 578 99999999999
Q ss_pred cHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccchhHHHhhh--hcCC-CccEEEEecCCCCCccC
Q 004977 165 CVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVS--SSLK-TIKNVIYFENDGSEKDS 241 (721)
Q Consensus 165 ~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~--~~~~-~~~~ii~~~~~~~~~~~ 241 (721)
.+|.++++|||+++|++++|+.+.++++++.+.+++++++++|+++.......... .... .+..++.....
T Consensus 75 ~pe~~~a~LA~~riGAI~~~vf~~f~~~al~~Ri~d~~~k~vit~d~~~~~gk~~~~~~~~~~~~~~~iv~~r~------ 148 (528)
T COG0365 75 SPEAVIALLATARIGAIPAVVSPGLSAEAVADRIADLGPKVLIADDGTFRNGKEIALLEDADAVLSSVVVVPRL------ 148 (528)
T ss_pred CHHHHHHHHHHHHcCCEEeecccCCCHHHHHHHHHccCCCEEEEecccccccccccchhHHHHhhcceEEeccc------
Confidence 99999999999999999999999999999999999999999999987654333211 1000 00002322211
Q ss_pred CccCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHHHHHHHh-hCCCCCCCcEE
Q 004977 242 GVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKT-LIPNPGRSDVY 320 (721)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~-~~~~~~~~d~~ 320 (721)
+ .+|+++...... ..+....+.+|+++|+|||||||+||||+++|+.++........ .+ .+.++|++
T Consensus 149 -------~---~~~~~~~~~~~~-~~~~~~~~~~dpl~ilYTSGTTG~PKgv~H~~gg~l~~~~~~~~~~~-~~~~~Dv~ 216 (528)
T COG0365 149 -------G---LWYDEAVEKASE-KFEFEPLPADDPLFLLYTSGTTGKPKGIVHSHGGYLVEHRLTAKFHG-DLLPGDRF 216 (528)
T ss_pred -------c---ccHHHHhhccCC-CCCccccCCCCeEEEEeCCCCCCCCceEEEeCchHHHHHHHHHHHhh-CCCCCCEE
Confidence 1 566776654332 22334478999999999999999999999999988777766555 45 77899999
Q ss_pred EeccChHHHHHHHH-HHHHHHhcceEeeCccccccccchhhccCccCcceeecceEEeechHHHHHHHHHHHHHHHhhcc
Q 004977 321 LAYLPLAHVLELAA-ESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKGG 399 (721)
Q Consensus 321 l~~~pl~h~~g~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~ 399 (721)
++..++.|+.|.+. ++.+|..|+++++++..... . +.+++..++++++|++++.|+.++.|.+...
T Consensus 217 w~~ad~GW~~g~~~~v~~pL~~Gat~~~~eg~p~~-~----~~~~~~~ie~~~vt~~~tsPT~~R~l~~~g~-------- 283 (528)
T COG0365 217 WNSSDPGWIYGLWYSVFSPLASGATTVLYDGRPFY-S----PERLWEALEKYKVTIFGTSPTFLRRLMKLGL-------- 283 (528)
T ss_pred EeCCCchhhhCchHHHHHHHhcCCeEEEeCCCCCC-C----HHHHHHHHHHhCCceEeeCHHHHHHHHhcCC--------
Confidence 99999999999987 78899999999884322221 1 2334444999999999999999999976321
Q ss_pred hhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHHHHHHHhhCCcccccccc
Q 004977 400 LTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMGAPIGQAYGL 479 (721)
Q Consensus 400 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~~~~~~g~~l~~~YG~ 479 (721)
.+..++++||.+.+.||||+++..+++.+.+|++|.+.||+
T Consensus 284 ---------------------------------------~~~~dlssLr~~~SaGEPLnpe~~~w~~~~~g~~i~d~~gq 324 (528)
T COG0365 284 ---------------------------------------GEPYDLSSLRVLGSAGEPLNPEAFEWFYSALGVWILDIYGQ 324 (528)
T ss_pred ---------------------------------------cccccchhheeeeccCCCCCHHHHHHHHHHhCCCEeccccc
Confidence 12234479999999999999999999999999999999999
Q ss_pred ccccccccccCCCCCCCCccCCCcCcceEEEEecCCCCcccCCCCCCcceEEEccc--cccccccCCCcccccccccCCC
Q 004977 480 TETCAGSTFSEWDDPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGF--NVTAGYFNNPGKTSEVYKVDER 557 (721)
Q Consensus 480 TE~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~--~v~~gY~~~~~~t~~~f~~~~~ 557 (721)
||++.+.....+ ..+.++.|+|+||+++.|+| ++|+.+ ++++ |+|+|+.+ +++++||+||+.+.+.|. +
T Consensus 325 TEtg~~~~~~~~-~~~~g~~g~p~pG~~~~vvd-d~g~~~---~~~~-G~Lvi~~~~p~~~~~~w~d~er~~~~y~---~ 395 (528)
T COG0365 325 TETGMGFIAGRP-PVKNGSSGLPLPGYAVRRVD-DEGNPV---PPGV-GELVVRLPWPGMALTYWNDPERYKEAYF---G 395 (528)
T ss_pred cccCccccCCCC-CcCCCCCCCCCCCceeEEEC-CCCCcC---CCCc-eEEEEeCCCchhhhhhhCCHHHHHHHHh---h
Confidence 999965555544 44566669999999999999 447654 4778 99999987 899999999999999984 4
Q ss_pred CcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcccceEEEEecCCCc---eEEEEEEcChHHH
Q 004977 558 GMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYVDNIMIHADPFHN---YCVALVVPSHKAL 634 (721)
Q Consensus 558 g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~~---~~~a~vv~~~~~~ 634 (721)
+||.|||.+++|+||+++|+||.||+||++ |+||.|.|||++|.+||.|.||+|+|.+|+. .++|||+++++..
T Consensus 396 --~~y~tGD~~~~DedGy~~i~GR~DDvI~vs-G~Rig~~EvE~~l~~hP~VaEaAvVg~pd~~kg~~v~afVvL~~g~~ 472 (528)
T COG0365 396 --RWYRTGDWAERDEDGYFWLHGRSDDVIKVS-GKRIGPLEIESVLLAHPAVAEAAVVGVPDPGKGQIVLAFVVLAAGVE 472 (528)
T ss_pred --ceeecCceeEEccCCCEEEEeeccceEecc-CeeccHHHHHHHHHhCcceeeeEEEeccCCCCCcEEEEEEEecCCCC
Confidence 499999999999999999999999999985 9999999999999999999999999998863 4999999987541
Q ss_pred HHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCCCCCCCCccCcccccChHHHHHHHHH
Q 004977 635 EKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEPWTPEAGLVTAALKIKREQLKAKFKD 714 (721)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~~~p~~~~~t~~gKi~R~~l~~~~~~ 714 (721)
+. ++.++|+++++ +.+.++..|+.|++++++ | +|.+|||.|+.||+.+.+
T Consensus 473 --------------------~~---~L~~ei~~~vr-~~~~~~~~p~~i~fv~~L--P----kT~sGKI~R~~lr~~~~~ 522 (528)
T COG0365 473 --------------------PN---ELAEEIRRHVA-RNIGPHAIPRKIRFVDEL--P----KTASGKIQRRLLRKILHK 522 (528)
T ss_pred --------------------hH---HHHHHHHHHHH-hccCcccCCceEEEecCC--C----CCCcccHHHHHHHHHHhh
Confidence 11 55688889987 556559999999999998 6 999999999999998773
No 15
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=100.00 E-value=4e-74 Score=657.77 Aligned_cols=542 Identities=21% Similarity=0.299 Sum_probs=428.1
Q ss_pred CCCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEE
Q 004977 81 ASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAI 160 (721)
Q Consensus 81 ~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i 160 (721)
..|+.++|+++++++|+++|+++.+ . .+.++++||+||.++++++|++|.+.|+++||+|+|
T Consensus 38 ~~~l~~~l~~~a~~~p~~~a~~~~~-----------~-------~~~~~~~Ty~el~~~v~~~A~~L~~~Gv~~gd~Vai 99 (614)
T PRK08180 38 PRRLTDRLVHWAQEAPDRVFLAERG-----------A-------DGGWRRLTYAEALERVRAIAQALLDRGLSAERPLMI 99 (614)
T ss_pred CccHHHHHHHHHHHCCCCceeeecc-----------C-------CCceeEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEE
Confidence 5789999999999999999998631 1 123468999999999999999999999999999999
Q ss_pred EccCcHhHHHHHHHHHhcCCEEEEecCCCC-----HHHHHHHHHhcCceEEEECccc--hhHHHhhhhcCCCccEEEEec
Q 004977 161 LAETCVEWFIAFQGCFRQSITVVTIYSSLG-----EDALIHSLNETQVTTLICDSKQ--LKKLSAVSSSLKTIKNVIYFE 233 (721)
Q Consensus 161 ~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~-----~~~l~~~l~~~~~~~vi~~~~~--~~~~~~~~~~~~~~~~ii~~~ 233 (721)
+++|+++|+++++||+++|+++||+++.++ .+++.+++++++++++|+++.. ...+..... ... .++..+
T Consensus 100 ~~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~--~~~-~~i~~~ 176 (614)
T PRK08180 100 LSGNSIEHALLALAAMYAGVPYAPVSPAYSLVSQDFGKLRHVLELLTPGLVFADDGAAFARALAAVVP--ADV-EVVAVR 176 (614)
T ss_pred ecCCCHHHHHHHHHHHHcCCeEeeeccccccccCCHHHHHHHHhcCCCcEEEEcCHHHHHHHHhhhcc--CCc-eEEEec
Confidence 999999999999999999999999999998 7999999999999999998642 222222111 112 233322
Q ss_pred CCCCCccCCccCCCCCceEeeHHHHHhcCCCCC--CCCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHHHHHHHhhC
Q 004977 234 NDGSEKDSGVSGGISNWTVSSFSEVEKLGKRSP--VDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLI 311 (721)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~ 311 (721)
.... .....+++++........ .......++|+++|+|||||||.||||++||+|+++.+......+
T Consensus 177 ~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~ilyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~ 245 (614)
T PRK08180 177 GAVP-----------GRAATPFAALLATPPTAAVDAAHAAVGPDTIAKFLFTSGSTGLPKAVINTHRMLCANQQMLAQTF 245 (614)
T ss_pred CCCC-----------CcccccHHHHhccccccchhhhccCCCcCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHhhc
Confidence 1110 011245666554321111 111234679999999999999999999999999999888877766
Q ss_pred CCCC--CCcEEEeccChHHHHHHHH-HHHHHHhcceEeeCccccccccchhhccCccCcceeecceEEeechHHHHHHHH
Q 004977 312 PNPG--RSDVYLAYLPLAHVLELAA-ESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVRE 388 (721)
Q Consensus 312 ~~~~--~~d~~l~~~pl~h~~g~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~ 388 (721)
.+. .++++++++|++|.+++.. ++.+++.|+++++.+....... ...++..++++++|+++++|++++.|++
T Consensus 246 -~~~~~~~~~~l~~lPl~h~~g~~~~~~~~l~~G~~v~~~~~~~~~~~----~~~~l~~i~~~~~t~~~~vP~~~~~l~~ 320 (614)
T PRK08180 246 -PFLAEEPPVLVDWLPWNHTFGGNHNLGIVLYNGGTLYIDDGKPTPGG----FDETLRNLREISPTVYFNVPKGWEMLVP 320 (614)
T ss_pred -cccCCCCcEEEEecchHHHhhHHHHHHHHHhcCCEEEEeCCCccchh----HHHHHHHHHHhCCcEEechHHHHHHHHH
Confidence 443 5689999999999999764 6678999999988432100000 0112333889999999999999999876
Q ss_pred HHHHHHHhhcchhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHHHHHHHh
Q 004977 389 GVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINIC 468 (721)
Q Consensus 389 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~~~~~ 468 (721)
...... ..+..++++||.+++||+++++++.+++.+.
T Consensus 321 ~~~~~~-------------------------------------------~~~~~~~~~lr~v~~gGa~l~~~~~~~~~~~ 357 (614)
T PRK08180 321 ALERDA-------------------------------------------ALRRRFFSRLKLLFYAGAALSQDVWDRLDRV 357 (614)
T ss_pred HHHhch-------------------------------------------hhhhhhccceeEEEEccCCCCHHHHHHHHHH
Confidence 432110 0112234689999999999999999888764
Q ss_pred ----hC--CccccccccccccccccccCCCCCCCCccCCCcCcceEEEEecCCCCcccCCCCCCcceEEEcccccccccc
Q 004977 469 ----MG--APIGQAYGLTETCAGSTFSEWDDPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYF 542 (721)
Q Consensus 469 ----~g--~~l~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~ 542 (721)
+| +++++.||+||++.+++.........+++|+|+||++++|+|. +..|||+|+|++++.|||
T Consensus 358 ~~~~~g~~~~l~~~YG~TE~~~~~~~~~~~~~~~~svG~p~pg~~v~i~d~-----------~~~GEi~vrg~~v~~GY~ 426 (614)
T PRK08180 358 AEATCGERIRMMTGLGMTETAPSATFTTGPLSRAGNIGLPAPGCEVKLVPV-----------GGKLEVRVKGPNVTPGYW 426 (614)
T ss_pred HHhhcCCCceeeeeecccccCCceEecccccCCCCcccCccCCcEEEEecC-----------CCCcEEEEecCccchhhc
Confidence 33 6899999999998776655444456689999999999999972 246999999999999999
Q ss_pred CCCcccccccccCCCCcceEeeCcEEEE----ccCCeEEEEecCCCeEEcCCeeeee--chHHHHHHhcCcccceEEEEe
Q 004977 543 NNPGKTSEVYKVDERGMCWFYTGDIGQV----YPDGCLEIIDRKKDIVKLQHGEYIS--LGKVEAALISSDYVDNIMIHA 616 (721)
Q Consensus 543 ~~~~~t~~~f~~~~~g~gw~~TGDlg~~----d~dG~l~i~GR~~d~ik~~~G~~v~--p~eIE~~l~~~p~V~~~~V~g 616 (721)
++|+.|++.|. .| |||+|||+|++ |+||+|+|+||+||+||+++|++|+ |.|||.++.+||.|++|+|+|
T Consensus 427 ~~p~~t~~~~~--~d--gw~~TGDlg~~~~~~d~~g~l~i~GR~~d~i~~~~G~~i~~~p~Eie~~l~~~p~V~~a~V~g 502 (614)
T PRK08180 427 RAPELTAEAFD--EE--GYYRSGDAVRFVDPADPERGLMFDGRIAEDFKLSSGTWVSVGPLRARAVSAGAPLVQDVVITG 502 (614)
T ss_pred CChhHhHhhcc--cC--CceeccceEEecCCcCCCCceEEecchhhhEEcCCCcEecchhhhHHHHhhcCchhheEEEEc
Confidence 99999999985 56 99999999999 4689999999999999988899877 778899999999999999999
Q ss_pred cCCCceEEEEEEcChHHHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCCCCCCCCc
Q 004977 617 DPFHNYCVALVVPSHKALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEPWTPEAGL 696 (721)
Q Consensus 617 ~~~~~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~~~p~~~~ 696 (721)
.++ ..++|+|+++++....|+... ...+..+.++.+++.+.+++.|.++.+ ...+.+++|+++++++++|+..+|.
T Consensus 503 ~~~-~~~~a~V~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~l~~~~~-~~~~~~~~p~~~~~~~~~p~~~~gk 578 (614)
T PRK08180 503 HDR-DEIGLLVFPNLDACRRLAGLL--ADASLAEVLAHPAVRAAFRERLARLNA-QATGSSTRVARALLLDEPPSLDAGE 578 (614)
T ss_pred CCC-CceEEEEEcCHHHHHHHHhhc--ccCCHHHHhcCHHHHHHHHHHHHHHHh-hccccHhheeEEEEecCCCCCccCc
Confidence 985 468899999988776666543 122344556678888888888888876 5556677999999999998888899
Q ss_pred cCcccccChHHHHHHHHHHHHhhhC
Q 004977 697 VTAALKIKREQLKAKFKDDLQMLYQ 721 (721)
Q Consensus 697 ~t~~gKi~R~~l~~~~~~~i~~~Y~ 721 (721)
+|++||++|+++.+.|+++|++||+
T Consensus 579 ~t~~~~~~R~~~~~~y~~~i~~lY~ 603 (614)
T PRK08180 579 ITDKGYINQRAVLARRAALVEALYA 603 (614)
T ss_pred cCccccccHHHHHHHhHHHHHHHhC
Confidence 9999999999999999999999995
No 16
>PRK12582 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.6e-73 Score=652.36 Aligned_cols=544 Identities=22% Similarity=0.312 Sum_probs=427.6
Q ss_pred CCCCCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCCCEE
Q 004977 79 KGASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRA 158 (721)
Q Consensus 79 ~~~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V 158 (721)
+...|+.++|+++++++||++|+++. ++. .+.++.+||+||.++++++|++|.+.|+++||+|
T Consensus 46 ~~~~~l~~~l~~~a~~~pd~~a~~~~-----------~~~------~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V 108 (624)
T PRK12582 46 PYPRSIPHLLAKWAAEAPDRPWLAQR-----------EPG------HGQWRKVTYGEAKRAVDALAQALLDLGLDPGRPV 108 (624)
T ss_pred CcccCHHHHHHHHHHHCCCchheecc-----------cCC------CCceEEeEHHHHHHHHHHHHHHHHHcCCCCCCEE
Confidence 45679999999999999999999863 110 1335689999999999999999999999999999
Q ss_pred EEEccCcHhHHHHHHHHHhcCCEEEEecCCCCH-----HHHHHHHHhcCceEEEECccc-hhHHHhhhhcCCCccEEEEe
Q 004977 159 AILAETCVEWFIAFQGCFRQSITVVTIYSSLGE-----DALIHSLNETQVTTLICDSKQ-LKKLSAVSSSLKTIKNVIYF 232 (721)
Q Consensus 159 ~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~-----~~l~~~l~~~~~~~vi~~~~~-~~~~~~~~~~~~~~~~ii~~ 232 (721)
+++++|+++|+++++||+++|++++|++|.++. +++.+++++++++++|+++.. .......... ..++ ++.+
T Consensus 109 ~i~~~n~~e~~~~~lA~~~~G~v~vpl~p~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~-~~~~-~i~~ 186 (624)
T PRK12582 109 MILSGNSIEHALMTLAAMQAGVPAAPVSPAYSLMSHDHAKLKHLFDLVKPRVVFAQSGAPFARALAALDL-LDVT-VVHV 186 (624)
T ss_pred EEecCCCHHHHHHHHHHHHcCCeEeeccCccccccCCHHHHHHHHHhcCCcEEEecCHHHHHHHHHhhhh-cCce-EEEE
Confidence 999999999999999999999999999999885 899999999999999998642 1211111111 1222 3333
Q ss_pred cCCCCCccCCccCCCCCceEeeHHHHHhcCCCCCC--CCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHHHHHHHhh
Q 004977 233 ENDGSEKDSGVSGGISNWTVSSFSEVEKLGKRSPV--DPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTL 310 (721)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~ 310 (721)
+.... ......++++......... ......++|+++|+|||||||.||||++||+++++.+......
T Consensus 187 ~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~th~~l~~~~~~~~~~ 255 (624)
T PRK12582 187 TGPGE-----------GIASIAFADLAATPPTAAVAAAIAAITPDTVAKYLFTSGSTGMPKAVINTQRMMCANIAMQEQL 255 (624)
T ss_pred cCCCc-----------ccccccHHHHhhcCCcchhhhhhccCCCCceEEEEEcCCCCCCCceEEeeHHHHHHHHHHHHHh
Confidence 32110 1122445665543221111 1123467899999999999999999999999999887776554
Q ss_pred CCCCCC---CcEEEeccChHHHHHHHH-HHHHHHhcceEeeCccccccccchhhccCccCcceeecceEEeechHHHHHH
Q 004977 311 IPNPGR---SDVYLAYLPLAHVLELAA-ESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRV 386 (721)
Q Consensus 311 ~~~~~~---~d~~l~~~pl~h~~g~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l 386 (721)
. .... .+++++++|++|++++.. ++.++..|+++++.+....... ...+...++++++|+++++|++++.|
T Consensus 256 ~-~~~~~~~~~~~l~~lPl~h~~g~~~~~~~~l~~G~tvvl~~~~~~~~~----~~~~~~~i~~~~~t~~~~vP~~~~~l 330 (624)
T PRK12582 256 R-PREPDPPPPVSLDWMPWNHTMGGNANFNGLLWGGGTLYIDDGKPLPGM----FEETIRNLREISPTVYGNVPAGYAML 330 (624)
T ss_pred c-cccCCCCCceEEEechHHHHHhHHHHHHHHHhCceEEEEcCCCcccch----HHHHHHHHHhcCCeEEeccCHHHHHH
Confidence 4 4433 589999999999999866 4567899999988432111110 01122337889999999999999988
Q ss_pred HHHHHHHHHhhcchhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHHHHHH
Q 004977 387 REGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFIN 466 (721)
Q Consensus 387 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~~~ 466 (721)
.+...... ..+..++++||.+++||+++++++.+++.
T Consensus 331 ~~~~~~~~-------------------------------------------~~~~~~~~slr~i~~gGa~l~~~~~~~~~ 367 (624)
T PRK12582 331 AEAMEKDD-------------------------------------------ALRRSFFKNLRLMAYGGATLSDDLYERMQ 367 (624)
T ss_pred HHHHhhCH-------------------------------------------HHHHHHhhheeEEEecCCCCCHHHHHHHH
Confidence 75422100 01111235899999999999999999888
Q ss_pred Hhh------CCccccccccccccccccccCCCCCCCCccCCCcCcceEEEEecCCCCcccCCCCCCcceEEEcccccccc
Q 004977 467 ICM------GAPIGQAYGLTETCAGSTFSEWDDPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAG 540 (721)
Q Consensus 467 ~~~------g~~l~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~g 540 (721)
+.+ +++++++||+||++.+++.......+.+++|+|+||++++|++ .|+.|||+|+|++++.|
T Consensus 368 ~~~~~~~g~~~~l~~~YG~TE~~~~~~~~~~~~~~~~svG~p~pg~~v~i~~-----------~G~~GEl~vrg~~v~~G 436 (624)
T PRK12582 368 ALAVRTTGHRIPFYTGYGATETAPTTTGTHWDTERVGLIGLPLPGVELKLAP-----------VGDKYEVRVKGPNVTPG 436 (624)
T ss_pred HHHHhhcCCCceEEeccccccccceeecccCCCCCCCCCCcCCCCcEEEEcc-----------CCCceEEEEECCccccc
Confidence 753 3689999999999876654344445568999999999999974 45789999999999999
Q ss_pred ccCCCcccccccccCCCCcceEeeCcEEEE-c---cCCeEEEEecCCCeEEcCCeeeeechHHH--HHHhcCcccceEEE
Q 004977 541 YFNNPGKTSEVYKVDERGMCWFYTGDIGQV-Y---PDGCLEIIDRKKDIVKLQHGEYISLGKVE--AALISSDYVDNIMI 614 (721)
Q Consensus 541 Y~~~~~~t~~~f~~~~~g~gw~~TGDlg~~-d---~dG~l~i~GR~~d~ik~~~G~~v~p~eIE--~~l~~~p~V~~~~V 614 (721)
||++|+.|++.|. .| |||+|||+|++ | ++|+|+|+||+||+||+++|++|+|.+|| .++.+||.|.+|+|
T Consensus 437 Y~~~p~~t~~~f~--~d--gw~~TGDlg~~~d~~~~~g~l~i~GR~~d~i~~~~G~~i~p~~iE~e~~l~~~p~V~~a~V 512 (624)
T PRK12582 437 YHKDPELTAAAFD--EE--GFYRLGDAARFVDPDDPEKGLIFDGRVAEDFKLSTGTWVSVGTLRPDAVAACSPVIHDAVV 512 (624)
T ss_pred ccCCccchhhhcC--cc--CCccccceEEecCCcCCCCceEEeccchhhEecCCCcEechHHHHHHHHHhcCcchheEEE
Confidence 9999999999996 56 99999999998 4 46999999999999999899999998885 68899999999999
Q ss_pred EecCCCceEEEEEEcChHHHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcc-cccEEEeeCCCCCCC
Q 004977 615 HADPFHNYCVALVVPSHKALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFE-IPAKIKLMPEPWTPE 693 (721)
Q Consensus 615 ~g~~~~~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~-~P~~i~~~~~~~~p~ 693 (721)
+|++ +.++.++|+|+......++...+. +..+.++++++.+.+++.|.++.+ .++.+. +|+++++++++|+.+
T Consensus 513 vG~~-~~~~g~lv~p~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 586 (624)
T PRK12582 513 AGQD-RAFIGLLAWPNPAACRQLAGDPDA---APEDVVKHPAVLAILREGLSAHNA--EAGGSSSRIARALLMTEPPSID 586 (624)
T ss_pred EcCC-CCcEEEEEecCHHHHHHHHhcCCC---CHHHHhcCHHHHHHHHHHHHHHHh--hcCCChhheEEEEEeCCCCCcc
Confidence 9986 567889999998876666554332 234566788899999999888874 789998 999999999998888
Q ss_pred CCccCcccccChHHHHHHHHHHHHhhhC
Q 004977 694 AGLVTAALKIKREQLKAKFKDDLQMLYQ 721 (721)
Q Consensus 694 ~~~~t~~gKi~R~~l~~~~~~~i~~~Y~ 721 (721)
+|++|++||++|+++.+.|+++|++||+
T Consensus 587 ~g~~t~~~~~~R~~~~~~y~~~i~~ly~ 614 (624)
T PRK12582 587 AGEITDKGYINQRAVLERRAALVERLYA 614 (624)
T ss_pred CCcCCccccccHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999996
No 17
>PTZ00297 pantothenate kinase; Provisional
Probab=100.00 E-value=6.4e-72 Score=661.66 Aligned_cols=565 Identities=20% Similarity=0.313 Sum_probs=458.3
Q ss_pred cCCCCCCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCCC
Q 004977 77 PWKGASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDT 156 (721)
Q Consensus 77 ~~~~~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd 156 (721)
+++...|+.++|++.++++|+++|+..+. + .++++++||+|+.++++++|++|.++|+++||
T Consensus 422 ~~~~~~Tl~dll~~~a~~~pd~~al~~~~----------~--------~g~~~~lTY~El~~~V~~lAa~L~~lGV~~GD 483 (1452)
T PTZ00297 422 PLAGVRSLGEMWERSVTRHSTFRCLGQTS----------E--------SGESEWLTYGTVDARARELGSGLLALGVRPGD 483 (1452)
T ss_pred CcccCCCHHHHHHHHHHHCCCCeEEEEec----------c--------CCCceEEEHHHHHHHHHHHHHHHHHcCCCCCC
Confidence 34566899999999999999999997431 0 13456899999999999999999999999999
Q ss_pred EEEEEccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccchhHHHhhhhcCCCccEEEEecCCC
Q 004977 157 RAAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDG 236 (721)
Q Consensus 157 ~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~ii~~~~~~ 236 (721)
+|+|+++|++||+++++||+++|+++||+++ +.+++.+++++++++++|++.+..+.+.++.. +.+++||+++...
T Consensus 484 rVaIls~N~~Ewvia~lA~~~~GaV~VPly~--t~~eL~yIL~~S~akvVfv~~~~l~kl~~i~~--~~Lr~IIv~d~~~ 559 (1452)
T PTZ00297 484 VIGVDCEASRNIVILEVACALYGFTTLPLVG--KGSTMRTLIDEHKIKVVFADRNSVAAILTCRS--RKLETVVYTHSFY 559 (1452)
T ss_pred EEEEEcCCCHHHHHHHHHHHHcCCEEEeCCC--CHHHHHHHHHhcCCcEEEEchhHHHHHHhhcc--cCCcEEEEECCCc
Confidence 9999999999999999999999999999985 46799999999999999999888777665533 3789999986421
Q ss_pred CCccCCccCCCCCceEeeHHHHHhcCCCCCCC-CCCCCCCCeEEEEe---ccCCCCCcchheeccHHHHHHHHHHHhhC-
Q 004977 237 SEKDSGVSGGISNWTVSSFSEVEKLGKRSPVD-PSLPSQNGVAVIMY---TSGSTGLPKGVMITHGNIVATAAAIKTLI- 311 (721)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~a~i~~---TSGTTG~PKgV~~sh~~l~~~~~~~~~~~- 311 (721)
...... .....+..+.+|+++...+.....+ ....+++|++.|+| ||||||.||||++||+|+++.+.......
T Consensus 560 ~~~~~~-~~~~~~i~~~s~~~ll~~G~~~~~~~~~~~~~dDlatIiYtSyTSGTTG~PKGVmLTH~Nlla~~~~~~~~~~ 638 (1452)
T PTZ00297 560 DEDDHA-VARDLNITLIPYEFVEQKGRLCPVPLKEHVTTDTVFTYVVDNTTSASGDGLAVVRVTHADVLRDISTLVMTGV 638 (1452)
T ss_pred cccccc-ccccCCcceeeHHHHHhcCcccCccccCCCCcccEEEEEecCCCCCCCcCCcEEEEeHHHHHHHHHHHhhhcc
Confidence 100000 0001134577899998876432221 23347889999996 99999999999999999999998875532
Q ss_pred -CCCCCCcEEEeccChHHHHHHHHHHHHHHhcceEeeCccccccccchhhccCccCcceeecceEEeechHHHHHHHHHH
Q 004977 312 -PNPGRSDVYLAYLPLAHVLELAAESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGV 390 (721)
Q Consensus 312 -~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~ 390 (721)
+...++|++++++|++|+++....+.+++.|++++++++..+.+. +++++||++++||++|+++.+.+
T Consensus 639 ~~~~~~~D~~Ls~LPLaHI~er~~~~~~l~~G~~I~~~d~~~lled-----------L~~~rPTv~~~VPrv~ekI~~~i 707 (1452)
T PTZ00297 639 LPSSFKKHLMVHFTPFAMLFNRVFVLGLFAHGSAVATVDAAHLQRA-----------FVKFQPTILVAAPSLFSTSRLQL 707 (1452)
T ss_pred ccCCCCCCEEEEechHHHHHHHHHHHHHHHcCCEEEeCCHHHHHHH-----------HHHHCCEEEEecHHHHHHHHHHH
Confidence 245678999999999999998777788999999988877777766 99999999999999999999998
Q ss_pred HHHHHhhcchhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCC--CCCHHHHHHHHHh
Q 004977 391 VKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGA--PLSADSQRFINIC 468 (721)
Q Consensus 391 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~--~l~~~~~~~~~~~ 468 (721)
..+....+.+++++|+++++.+...++. .....++++.++|+++|+.+|+++|.+++||+ +++..+..
T Consensus 708 ~~~~~~~~~~~~~lf~~A~~~k~~~~~~-----g~~~~~l~d~LVf~kir~~lGGrlr~~isGga~~~l~~~l~~----- 777 (1452)
T PTZ00297 708 SRANERYSAVYSWLFERAFQLRSRLINI-----HRRDSSLLRFIFFRATQELLGGCVEKIVLCVSEESTSFSLLE----- 777 (1452)
T ss_pred HHHhhhhhHHHHHHHHHHHHHHHHHHhc-----CCCCcHHHHHHHHHHHHHHhcCCeEEEEECCCccccChHHhC-----
Confidence 8888888889999999999987765441 12345689999999999999999999999984 55544433
Q ss_pred hCCccccccccccccccccccCCCCCCCCccCCCcCcceEEEEecCCCCcccCCCCCCcceEEEccccccccccCCCccc
Q 004977 469 MGAPIGQAYGLTETCAGSTFSEWDDPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKT 548 (721)
Q Consensus 469 ~g~~l~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t 548 (721)
+++++.+||+||+. +.+.+.... ..|+|+|++++||.+.++.+. .+..|||+++ |++||++|
T Consensus 778 -~i~i~~g~glTE~~---~~~~~~~~~--~~G~PlpgvEvKI~~~~E~~~-----~~~~GEIlvr-------~~kdpe~T 839 (1452)
T PTZ00297 778 -HISVCYVPCLREVF---FLPSEGVFC--VDGTPAPSLQVDLEPFDEPSD-----GAGIGQLVLA-------KKGEPRRT 839 (1452)
T ss_pred -CceEEEecceEEee---eecCCCCcc--cCCeecCceEEEEcccccccC-----CCCCCeEEEE-------ECCChHHH
Confidence 57788999999953 333333333 349999999999998544332 1247999995 45899999
Q ss_pred ccccccCCCCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcccceEEEEecCCCceEEEEEE
Q 004977 549 SEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYVDNIMIHADPFHNYCVALVV 628 (721)
Q Consensus 549 ~~~f~~~~~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~~~~~a~vv 628 (721)
++.+ + ||+ +||+|+|+||+||+||+++|+||+|+.||+.+.++|.|.+++|+|++. ++++|+|+
T Consensus 840 ~e~~----~--gW~---------~dG~L~IidRkKdlikls~GEyVaP~~IE~~l~~sp~I~qi~V~Gd~~-k~lvALVv 903 (1452)
T PTZ00297 840 LPIA----A--QWK---------RDRTLRLLGPPLGILLPVAYEYVIAAELERIFSQSRYVNDIFLYADPS-RPIIAIVS 903 (1452)
T ss_pred HHhh----C--cCc---------cCCeEEEEeccccceECCCCcEEcHHHHHHHHhcCCCccEEEEEecCC-CceEEEEE
Confidence 9853 4 785 699999999999999999999999999999999999999999999874 45999999
Q ss_pred cChHHHH-HHHHHhCCCcc-------cHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCCCCCCCCccCcc
Q 004977 629 PSHKALE-KWAHEASIKYE-------DLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEPWTPEAGLVTAA 700 (721)
Q Consensus 629 ~~~~~~~-~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~~~p~~~~~t~~ 700 (721)
|+.+.+. +|+++.++... +..+++++ ..+.+.+++++..+.+++..+++++.+.+++++|++++|++|++
T Consensus 904 pd~e~l~~~wa~~~gi~~~~~~~~~~~~~el~~~--~~~~v~~~i~~V~~~n~l~~~ei~k~~~Ll~~~Ft~enGlLTPT 981 (1452)
T PTZ00297 904 PNRDTVEFEWRQSHCMGEGGGPARQLGWTELVAY--ASSLLTADFACIAKENGLHPSNVPEYVHLHPHAFKDHSTFLTPY 981 (1452)
T ss_pred eCHHHHHHHHHHHcCCCccccccccCCHHHHHHh--HHHHHHHHHHHHHHHhCcCccceeeEEEEeCCCCCCCCCcCChh
Confidence 9999999 99998887531 35555542 22344555555555467899999999999999999999999999
Q ss_pred cccChHHHHHHHHHHHHhhhC
Q 004977 701 LKIKREQLKAKFKDDLQMLYQ 721 (721)
Q Consensus 701 gKi~R~~l~~~~~~~i~~~Y~ 721 (721)
+|++|+.+.++|+++|++||+
T Consensus 982 lKlKR~~I~~kY~~~Ie~LY~ 1002 (1452)
T PTZ00297 982 GKIRRDAVHSYFSSVIERFYS 1002 (1452)
T ss_pred hhhhHHHHHHHHHHHHHHHhc
Confidence 999999999999999999995
No 18
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=100.00 E-value=4e-72 Score=635.89 Aligned_cols=525 Identities=22% Similarity=0.270 Sum_probs=406.8
Q ss_pred CCCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEE
Q 004977 81 ASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAI 160 (721)
Q Consensus 81 ~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i 160 (721)
..|+.++|+++++++|+++|++. +++ .+||+||.++++++|++|.+.|+++||+|+|
T Consensus 6 ~~~~~~~~~~~~~~~p~~~a~~~------------~~~-----------~~Ty~el~~~~~~la~~L~~~Gv~~gd~V~v 62 (563)
T PLN02860 6 QAHICQCLTRLATLRGNAVVTIS------------GNR-----------RRTGHEFVDGVLSLAAGLLRLGLRNGDVVAI 62 (563)
T ss_pred hhHHHHHHHHHHHhcCCceEEec------------CCc-----------eeeHHHHHHHHHHHHHHHHHhCCCCCCEEEE
Confidence 46899999999999999999974 233 6999999999999999999999999999999
Q ss_pred EccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccchhHHHhhh-hcCCCccEEEEecCCCCCc
Q 004977 161 LAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVS-SSLKTIKNVIYFENDGSEK 239 (721)
Q Consensus 161 ~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~-~~~~~~~~ii~~~~~~~~~ 239 (721)
+++|+++|+++++||+++|++++||++.++.+++.+++++++++++++++........+. ..++.++.++..+......
T Consensus 63 ~~~n~~~~~~~~la~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 142 (563)
T PLN02860 63 AALNSDLYLEWLLAVACAGGIVAPLNYRWSFEEAKSAMLLVRPVMLVTDETCSSWYEELQNDRLPSLMWQVFLESPSSSV 142 (563)
T ss_pred EcCCCHHHHHHHHHHhhccEEEEeCCcccCHHHHHHHHHhcCceEEEEecccchHHHHHhhccCCceeEEEEecCccccc
Confidence 999999999999999999999999999999999999999999999999876543333321 3345555555544321100
Q ss_pred cCCccCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHHHHHHHhhCCCCCCCcE
Q 004977 240 DSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNPGRSDV 319 (721)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~d~ 319 (721)
..........+++...............++++++|+|||||||.||||+++|++++.........+ .+.++|+
T Consensus 143 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~-~~~~~d~ 215 (563)
T PLN02860 143 ------FIFLNSFLTTEMLKQRALGTTELDYAWAPDDAVLICFTSGTTGRPKGVTISHSALIVQSLAKIAIV-GYGEDDV 215 (563)
T ss_pred ------ccchhhccccchhccCccccccccCCCCCCCeEEEEecCCCCCCCceEEeehHHHHHHHHHHHhhc-CCCCCCE
Confidence 000001112222211111111111234678999999999999999999999999998877766666 8899999
Q ss_pred EEeccChHHHHHHHHHHHHHHhcceEeeCccccccccchhhccCccCcceeecceEEeechHHHHHHHHHHHHHHHhhcc
Q 004977 320 YLAYLPLAHVLELAAESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKGG 399 (721)
Q Consensus 320 ~l~~~pl~h~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~ 399 (721)
+++.+|++|++++...+.++..|+++++.+... ...++..++++++|+++++|+++..|.+.......
T Consensus 216 ~l~~~pl~h~~g~~~~~~~l~~G~~~v~~~~~~--------~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~---- 283 (563)
T PLN02860 216 YLHTAPLCHIGGLSSALAMLMVGACHVLLPKFD--------AKAALQAIKQHNVTSMITVPAMMADLISLTRKSMT---- 283 (563)
T ss_pred EEEecCchhhccHHHHHHHHHcCceEEecCCCC--------HHHHHHHHHHhCCeeEEeChHHHHHHHHhhhhhhc----
Confidence 999999999999988888899999998843211 11223339999999999999999998764211000
Q ss_pred hhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHHHHHHHhh-CCccccccc
Q 004977 400 LTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICM-GAPIGQAYG 478 (721)
Q Consensus 400 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~~~~~~-g~~l~~~YG 478 (721)
....+++|.+++||+++++++.+.+++.+ |+++++.||
T Consensus 284 -----------------------------------------~~~~~~lr~~~~gG~~l~~~~~~~~~~~~~~~~~~~~YG 322 (563)
T PLN02860 284 -----------------------------------------WKVFPSVRKILNGGGSLSSRLLPDAKKLFPNAKLFSAYG 322 (563)
T ss_pred -----------------------------------------cccccceeEEEeCCCcCCHHHHHHHHHhcCCCceecCCC
Confidence 01125899999999999999999998887 789999999
Q ss_pred cccccccccccCCCC-----------------------CCCCccCCCcCcceEEEEecCCCCcccCCCCCCcceEEEccc
Q 004977 479 LTETCAGSTFSEWDD-----------------------PSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGF 535 (721)
Q Consensus 479 ~TE~~~~~~~~~~~~-----------------------~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~ 535 (721)
+||++..++.....+ ....++|+|+|+++++|++.+ +|+.|||+|+|+
T Consensus 323 ~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~~~~---------~g~~Gel~v~g~ 393 (563)
T PLN02860 323 MTEACSSLTFMTLHDPTLESPKQTLQTVNQTKSSSVHQPQGVCVGKPAPHVELKIGLDE---------SSRVGRILTRGP 393 (563)
T ss_pred ccccCcccccccccccccccchhhhhhhcccccccccccCCcccCCccCCcEEEEecCC---------CCceeEEEEecC
Confidence 999986554332211 112378999999999999832 468899999999
Q ss_pred cccccccCCCcccccccccCCCCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcccceEEEE
Q 004977 536 NVTAGYFNNPGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYVDNIMIH 615 (721)
Q Consensus 536 ~v~~gY~~~~~~t~~~f~~~~~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~~~~V~ 615 (721)
+++.|||++|+.|++.|. .+ |||+|||+|++|+||+++|+||+||+||+ +|++|+|.|||+++.+||+|.+|+|+
T Consensus 394 ~~~~GY~~~~~~t~~~~~--~~--g~~~TGDl~~~d~dG~l~~~GR~~d~i~~-~G~~v~p~eIE~~l~~~p~V~~~~v~ 468 (563)
T PLN02860 394 HVMLGYWGQNSETASVLS--ND--GWLDTGDIGWIDKAGNLWLIGRSNDRIKT-GGENVYPEEVEAVLSQHPGVASVVVV 468 (563)
T ss_pred cccccccCCccccchhcc--CC--CeEEccceEEEcCCCCEEEeecccceeEE-CCEEccHHHHHHHHHhCCCcceeEEE
Confidence 999999999999999886 56 89999999999999999999999999997 69999999999999999999999999
Q ss_pred ecCCC---ceEEEEEEcChHHHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEee-CCCCC
Q 004977 616 ADPFH---NYCVALVVPSHKALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLM-PEPWT 691 (721)
Q Consensus 616 g~~~~---~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~-~~~~~ 691 (721)
+.+++ +.++|+|++.++.. |.. .. ........ ....++|++++++.+|++|++|+.++++ +.+
T Consensus 469 ~~~~~~~~~~~~a~v~~~~~~~--~~~----~~--~~~~~~~~---~~~~~~l~~~~~~~~L~~~~~P~~~~~~~~~l-- 535 (563)
T PLN02860 469 GVPDSRLTEMVVACVRLRDGWI--WSD----NE--KENAKKNL---TLSSETLRHHCREKNLSRFKIPKLFVQWRKPF-- 535 (563)
T ss_pred EEecCcCCceEEEEEEECCccc--ccc----cc--chhhcccc---cccHHHHHHHHhhCcccccccceEEEEEecCC--
Confidence 98865 46999999876420 000 00 00000000 0113678888883369999999999876 445
Q ss_pred CCCCccCcccccChHHHHHHHHHHHHhh
Q 004977 692 PEAGLVTAALKIKREQLKAKFKDDLQML 719 (721)
Q Consensus 692 p~~~~~t~~gKi~R~~l~~~~~~~i~~~ 719 (721)
| +|++|||+|++|++++.++++.+
T Consensus 536 P----~t~~GKi~r~~L~~~~~~~~~~~ 559 (563)
T PLN02860 536 P----LTTTGKIRRDEVRREVLSHLQSL 559 (563)
T ss_pred C----CCcccchhHHHHHHHHHHHHhcc
Confidence 6 99999999999999998887653
No 19
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.6e-72 Score=642.89 Aligned_cols=538 Identities=16% Similarity=0.172 Sum_probs=406.3
Q ss_pred CCCHHHHHHHHHHh--CCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCCCEE
Q 004977 81 ASTMAALFEQSCKS--HPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRA 158 (721)
Q Consensus 81 ~~tl~~~~~~~a~~--~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V 158 (721)
.++..++++++++. +|+++|+++.. ++. +..+.+||+||.++++++|++|+++|+++||+|
T Consensus 58 ~n~~~~~l~~~~~~~~~~~~~A~~~~~----------~~~-------~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GDrV 120 (647)
T PTZ00237 58 LNTCYNVLDIHVKNPLKRDQDALIYEC----------PYL-------KKTIKLTYYQLYEKVCEFSRVLLNLNISKNDNV 120 (647)
T ss_pred eeHHHHHHHHhhcccCCCCceEEEEEc----------CCC-------CceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEE
Confidence 46678889888765 79999998742 111 123579999999999999999999999999999
Q ss_pred EEEccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECcc---------chhHHHhhhhcCC-CccE
Q 004977 159 AILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSK---------QLKKLSAVSSSLK-TIKN 228 (721)
Q Consensus 159 ~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~---------~~~~~~~~~~~~~-~~~~ 228 (721)
+|+++|++|+++++|||+++|++++|+++.++++++.++|++++++++|+++. ..+.+.+...... ...+
T Consensus 121 ~i~~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (647)
T PTZ00237 121 LIYMANTLEPLIAMLSCARIGATHCVLFDGYSVKSLIDRIETITPKLIITTNYGILNDEIITFTPNLKEAIELSTFKPSN 200 (647)
T ss_pred EEECCCCHHHHHHHHHHHHhCcEEEeeCCCCCHHHHHHHHHhcCCCEEEEcccceeCCceechHHHHHHHHhcccCCCCE
Confidence 99999999999999999999999999999999999999999999999999762 2233333322111 2345
Q ss_pred EEEecCCCC---CccCCccCCCCCceEeeHHHHHhcCC----CCCCCCCCCCCCCeEEEEeccCCCCCcchheeccHH-H
Q 004977 229 VIYFENDGS---EKDSGVSGGISNWTVSSFSEVEKLGK----RSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGN-I 300 (721)
Q Consensus 229 ii~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~-l 300 (721)
++.+..... .....+...........|+++..... ..........++|+++|+|||||||.||||+++|++ +
T Consensus 201 vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~IlyTSGTTG~PKgV~~sh~~~l 280 (647)
T PTZ00237 201 VITLFRNDITSESDLKKIETIPTIPNTLSWYDEIKKIKENNQSPFYEYVPVESSHPLYILYTSGTTGNSKAVVRSNGPHL 280 (647)
T ss_pred EEEEEcCCcccccccccccccCCCcccccHHHHHhhhccccCCCCCCceeeCCCCcEEEEEcCCCCCCCCeEEEcCcHHH
Confidence 554422110 00000000000012245666654221 111122345789999999999999999999999999 4
Q ss_pred HHHHHHHHhhCCCCCCCcEEEeccChHHHHHHHHHHHHHHhcceEeeCccccccccchhhccCccCcceeecceEEeech
Q 004977 301 VATAAAIKTLIPNPGRSDVYLAYLPLAHVLELAAESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVP 380 (721)
Q Consensus 301 ~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P 380 (721)
.+........+ ....+|++++..|++|+.+...++.+|+.|+++++.+...+... .....++..++++++|+++++|
T Consensus 281 ~~~~~~~~~~~-~~~~~d~~~~~~~~~w~~~~~~~~~~l~~G~t~v~~~~~~~~p~--~~~~~~~~~i~~~~vt~~~~~P 357 (647)
T PTZ00237 281 VGLKYYWRSII-EKDIPTVVFSHSSIGWVSFHGFLYGSLSLGNTFVMFEGGIIKNK--HIEDDLWNTIEKHKVTHTLTLP 357 (647)
T ss_pred HHHHHHHHHhc-CCCCCcEEEEcCCCceEeeHHHHHHHHhCCcEEEEeCCCCCCCC--CchHHHHHHHHHhCeEEEEeCH
Confidence 44333334444 67788999999999998766667888999999988442111100 0012344459999999999999
Q ss_pred HHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHH
Q 004977 381 AIFDRVREGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSAD 460 (721)
Q Consensus 381 ~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~ 460 (721)
++++.|.+....... .......++||.+++||++++++
T Consensus 358 ~~~~~l~~~~~~~~~------------------------------------------~~~~~~l~~Lr~i~~~G~~l~~~ 395 (647)
T PTZ00237 358 KTIRYLIKTDPEATI------------------------------------------IRSKYDLSNLKEIWCGGEVIEES 395 (647)
T ss_pred HHHHHHHhhCccccc------------------------------------------cccccCcchheEEEecCccCCHH
Confidence 999998763110000 00011225899999999999999
Q ss_pred HHHHHHHhhCCccccccccccccccccccCCC-CCCCCccCCCcCcceEEEEecCCCCcccCCCCCCcceEEEccc---c
Q 004977 461 SQRFINICMGAPIGQAYGLTETCAGSTFSEWD-DPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGF---N 536 (721)
Q Consensus 461 ~~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~-~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~---~ 536 (721)
+.+++++.+|+++++.||+||+++.++..... ....+++|+|+|+++++|+| ++|..+ ++|+.|||+++|| +
T Consensus 396 ~~~~~~~~~g~~i~~~yG~TE~~~~~~~~~~~~~~~~~s~G~p~~g~~~~i~d-~~g~~~---~~ge~GEl~v~~p~~p~ 471 (647)
T PTZ00237 396 IPEYIENKLKIKSSRGYGQTEIGITYLYCYGHINIPYNATGVPSIFIKPSILS-EDGKEL---NVNEIGEVAFKLPMPPS 471 (647)
T ss_pred HHHHHHHhcCCCEEeeechHHhChhhhccCCCCCCCCCCCccCcCCceEEEEC-CCCCCC---CCCCceEEEEeccCCch
Confidence 99999998999999999999998665433222 22348999999999999999 567654 4789999999986 7
Q ss_pred ccccccCCCcccccccccCCCCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcccceEEEEe
Q 004977 537 VTAGYFNNPGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYVDNIMIHA 616 (721)
Q Consensus 537 v~~gY~~~~~~t~~~f~~~~~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~~~~V~g 616 (721)
++.|||++++.|.+.|.. .+ |||+|||+|++|+||+|+|+||+||+||+ +|+||+|.|||++|.+||.|.+|+|+|
T Consensus 472 ~~~gy~~~~~~~~~~f~~-~~--g~~~TGDlg~~d~dG~l~i~GR~dd~i~~-~G~rI~p~eIE~~l~~~p~V~eaavvg 547 (647)
T PTZ00237 472 FATTFYKNDEKFKQLFSK-FP--GYYNSGDLGFKDENGYYTIVSRSDDQIKI-SGNKVQLNTIETSILKHPLVLECCSIG 547 (647)
T ss_pred hhCceeCCHHHHHHHHhC-CC--CEEECCcEEEECCCCeEEEEeccCCEEEE-CCEEeCHHHHHHHHHhCCCceeeEEEe
Confidence 899999999999987731 14 89999999999999999999999999997 599999999999999999999999999
Q ss_pred cCCC---ceEEEEEEcChHHHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCCCCCC
Q 004977 617 DPFH---NYCVALVVPSHKALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEPWTPE 693 (721)
Q Consensus 617 ~~~~---~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~~~p~ 693 (721)
.+++ +.++|+|+++++.. +... ..+++.++|+++++ ++|++|++|+.|++++++ |
T Consensus 548 ~~~~~~g~~~~a~Vv~~~~~~-------~~~~-----------~~~~l~~~i~~~~~-~~l~~~~~P~~i~~v~~l--P- 605 (647)
T PTZ00237 548 IYDPDCYNVPIGLLVLKQDQS-------NQSI-----------DLNKLKNEINNIIT-QDIESLAVLRKIIIVNQL--P- 605 (647)
T ss_pred eEcCCCCCEEEEEEEeccCcc-------ccCC-----------CHHHHHHHHHHHHH-hhcCccccCcEEEEcCCC--C-
Confidence 9875 46899999874310 0000 01245578888998 899999999999999998 6
Q ss_pred CCccCcccccChHHHHHHHH
Q 004977 694 AGLVTAALKIKREQLKAKFK 713 (721)
Q Consensus 694 ~~~~t~~gKi~R~~l~~~~~ 713 (721)
+|++|||+|+.|++.+.
T Consensus 606 ---~T~sGKi~R~~Lr~~~~ 622 (647)
T PTZ00237 606 ---KTKTGKIPRQIISKFLN 622 (647)
T ss_pred ---CCCCccEeHHHHHHHHc
Confidence 99999999999999874
No 20
>PRK07529 AMP-binding domain protein; Validated
Probab=100.00 E-value=3.1e-71 Score=635.13 Aligned_cols=531 Identities=22% Similarity=0.275 Sum_probs=420.3
Q ss_pred CCCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEE
Q 004977 81 ASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAI 160 (721)
Q Consensus 81 ~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i 160 (721)
+.|++++|+++++++|+++|+++... ++. ....+++||+||.++++++|+.|+++|+++||+|++
T Consensus 24 ~~t~~~~l~~~a~~~p~~~Al~~~~~---------~~~------~~~~~~~Ty~eL~~~v~~~A~~L~~~Gi~~gd~V~i 88 (632)
T PRK07529 24 PASTYELLSRAAARHPDAPALSFLLD---------ADP------LDRPETWTYAELLADVTRTANLLHSLGVGPGDVVAF 88 (632)
T ss_pred CCCHHHHHHHHHHHCCCCceEEeecc---------cCC------CCCCceeEHHHHHHHHHHHHHHHHHcCCCCCCEEEE
Confidence 46899999999999999999986421 111 122357999999999999999999999999999999
Q ss_pred EccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccc-----hhHHHhhhhcCCCccEEEEecCC
Q 004977 161 LAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQ-----LKKLSAVSSSLKTIKNVIYFEND 235 (721)
Q Consensus 161 ~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~-----~~~~~~~~~~~~~~~~ii~~~~~ 235 (721)
+++|++++++++|||+++| +++|+++.++++++.+++++++++++|++... .+.+.......+.++.++.++..
T Consensus 89 ~~~n~~e~~~~~lA~~~~G-i~~pi~~~~~~~~i~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 167 (632)
T PRK07529 89 LLPNLPETHFALWGGEAAG-IANPINPLLEPEQIAELLRAAGAKVLVTLGPFPGTDIWQKVAEVLAALPELRTVVEVDLA 167 (632)
T ss_pred ECCCCHHHHHHHHHHHHhC-EEEeCCCcCCHHHHHHHHHhcCCcEEEEeCCCCCchHHHHHHHHHhcCCcceeEEEecCc
Confidence 9999999999999999999 57999999999999999999999999997543 34555556667778888776543
Q ss_pred CCCc-cCCcc----CCCCCceEeeHHHHHhcCCCCCC-CCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHHHHHHHh
Q 004977 236 GSEK-DSGVS----GGISNWTVSSFSEVEKLGKRSPV-DPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKT 309 (721)
Q Consensus 236 ~~~~-~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~ 309 (721)
.... ..... ....+..+..+++.......... ......++++++|+|||||||.||||++||+++++.+.....
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~ 247 (632)
T PRK07529 168 RYLPGPKRLAVPLIRRKAHARILDFDAELARQPGDRLFSGRPIGPDDVAAYFHTGGTTGMPKLAQHTHGNEVANAWLGAL 247 (632)
T ss_pred ccccccccccccccccccccccCCHHHHHhcCCCccccccCCCCcCceEEEEECCCccCcCCEEEEcHHHHHHHHHHHHH
Confidence 2100 00000 00012234556665544322211 123346799999999999999999999999999998887777
Q ss_pred hCCCCCCCcEEEeccChHHHHHHHH-HHHHHHhcceEeeCccccccccchhhccCccCcceeecceEEeechHHHHHHHH
Q 004977 310 LIPNPGRSDVYLAYLPLAHVLELAA-ESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVRE 388 (721)
Q Consensus 310 ~~~~~~~~d~~l~~~pl~h~~g~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~ 388 (721)
.+ .+.++|++++.+|++|.++... .+.++..|+++++.++..+.+.. ....++..++++++|++.++|+++..+.+
T Consensus 248 ~~-~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~vv~~~~~~~~~~~--~~~~~~~~i~~~~vt~~~~~P~~~~~l~~ 324 (632)
T PRK07529 248 LL-GLGPGDTVFCGLPLFHVNALLVTGLAPLARGAHVVLATPQGYRGPG--VIANFWKIVERYRINFLSGVPTVYAALLQ 324 (632)
T ss_pred hc-CCCCCCEEEEecCchhhhHHHHHHHHHHHCCCEEEecCccccCcch--HHHHHHHHHHHhCCeEEEeHHHHHHHHHh
Confidence 77 7889999999999999999865 67789999999997654433221 01234455899999999999999998875
Q ss_pred HHHHHHHhhcchhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHHHHHHHh
Q 004977 389 GVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINIC 468 (721)
Q Consensus 389 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~~~~~ 468 (721)
.... ....++||.+++||+++++++.+.+++.
T Consensus 325 ~~~~------------------------------------------------~~~~~slr~v~~gg~~l~~~l~~~~~~~ 356 (632)
T PRK07529 325 VPVD------------------------------------------------GHDISSLRYALCGAAPLPVEVFRRFEAA 356 (632)
T ss_pred Cccc------------------------------------------------CCCccceEEEEEcCCCCCHHHHHHHHHH
Confidence 2110 0112589999999999999999999998
Q ss_pred hCCccccccccccccccccccCCCC-CCCCccCCCcCcceEEEEecC-CCCcccCCCCCCcceEEEccccccccccCCCc
Q 004977 469 MGAPIGQAYGLTETCAGSTFSEWDD-PSVGRVGPPVPCCYIKLVSWD-EGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPG 546 (721)
Q Consensus 469 ~g~~l~~~YG~TE~~~~~~~~~~~~-~~~~~vG~p~p~~~v~i~d~~-~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~ 546 (721)
+|++++++||+||++.+++...... ...+++|+|+|+++++|+..+ ++.+...+++|+.|||+|+||+++.||++++
T Consensus 357 ~g~~l~~~YG~TE~~~~~~~~~~~~~~~~~svG~~~p~~~v~i~~~d~~g~~~~~~~~g~~Gel~v~gp~v~~GY~~~~- 435 (632)
T PRK07529 357 TGVRIVEGYGLTEATCVSSVNPPDGERRIGSVGLRLPYQRVRVVILDDAGRYLRDCAVDEVGVLCIAGPNVFSGYLEAA- 435 (632)
T ss_pred hCCcEeeeecccccCcccccCCccccccCCCcccccCCceEEEEEcCCCCcccccCCCCCceEEEEECCCccccccCCc-
Confidence 9999999999999987776554432 356899999999999997533 3433334678999999999999999999865
Q ss_pred ccccccccCCCCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcccceEEEEecCCC---ceE
Q 004977 547 KTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYVDNIMIHADPFH---NYC 623 (721)
Q Consensus 547 ~t~~~f~~~~~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~ 623 (721)
.+.+.|. .+ |||+|||+|++|+||+++|.||.||+||+ +|++|+|.+||++|.+||+|.+|+|++.++. +.+
T Consensus 436 ~~~~~~~--~~--gw~~TGDlg~~d~dG~l~i~GR~~d~i~~-~G~~i~p~eIE~~l~~~p~V~~a~vvg~~d~~~ge~~ 510 (632)
T PRK07529 436 HNKGLWL--ED--GWLNTGDLGRIDADGYFWLTGRAKDLIIR-GGHNIDPAAIEEALLRHPAVALAAAVGRPDAHAGELP 510 (632)
T ss_pred ccccccc--CC--CceEcCcEEEEcCCceEEEEecccCEEEe-CCEEECHHHHHHHHHhCCCeeEEEEEeccCCCCCcee
Confidence 4556664 45 89999999999999999999999999996 7999999999999999999999999998875 358
Q ss_pred EEEEEcChHHHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCC-CcccccEEEeeCCCCCCCCCccCcccc
Q 004977 624 VALVVPSHKALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLD-KFEIPAKIKLMPEPWTPEAGLVTAALK 702 (721)
Q Consensus 624 ~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~-~~~~P~~i~~~~~~~~p~~~~~t~~gK 702 (721)
+|+|++.++. ..+ .++|+++++ .+|+ .+++|+.|++++++ | +|++||
T Consensus 511 ~a~v~l~~~~----------~~~---------------~~~l~~~~~-~~l~~~~~~P~~i~~v~~l--P----~t~~GK 558 (632)
T PRK07529 511 VAYVQLKPGA----------SAT---------------EAELLAFAR-DHIAERAAVPKHVRILDAL--P----KTAVGK 558 (632)
T ss_pred EEEEEEcCCC----------CCC---------------HHHHHHHHH-HhcchhccCCcEEEEecCC--C----CCCCCc
Confidence 9999887532 000 257888888 7776 58999999999988 6 999999
Q ss_pred cChHHHHHHHHHHH
Q 004977 703 IKREQLKAKFKDDL 716 (721)
Q Consensus 703 i~R~~l~~~~~~~i 716 (721)
++|++|++.+....
T Consensus 559 i~r~~Lr~~~~~~~ 572 (632)
T PRK07529 559 IFKPALRRDAIRRV 572 (632)
T ss_pred ccHHHHHHHHHHHH
Confidence 99999998876543
No 21
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=2.9e-71 Score=624.32 Aligned_cols=499 Identities=21% Similarity=0.249 Sum_probs=392.1
Q ss_pred CCCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEE
Q 004977 81 ASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAI 160 (721)
Q Consensus 81 ~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i 160 (721)
..++.+.|.+.++++|+++|+.+. ++ +.+||+||.++++++|+.|.+. +||+|+|
T Consensus 18 ~~~~~~~~~~~~~~~p~~~a~~~~-----------~~-----------~~~Ty~el~~~~~~lA~~L~~~---~gd~Val 72 (539)
T PRK06334 18 GKTVLESFLKLCSEMTTATVCWDE-----------QL-----------GKLSYNQVRKAVIALATKVSKY---PDQHIGI 72 (539)
T ss_pred CCcHHHHHHHHHHhCCCceEEEeC-----------CC-----------CcccHHHHHHHHHHHHHHHhhc---cCCeEEE
Confidence 478999999999999999998642 11 2599999999999999999873 8999999
Q ss_pred EccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccchhHHHhhhhcCC-CccEEEEecCCCCCc
Q 004977 161 LAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLK-TIKNVIYFENDGSEK 239 (721)
Q Consensus 161 ~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~-~~~~ii~~~~~~~~~ 239 (721)
+++|+++|++++|||+++|+++||+++.++.+++.++|++++++++|++.+....+.+...... ....++.++.....
T Consensus 73 ~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~- 151 (539)
T PRK06334 73 MMPASAGAYIAYFATLLSGKIPVMINWSQGLREVTACANLVGVTHVLTSKQLMQHLAQTHGEDAEYPFSLIYMEEVRKE- 151 (539)
T ss_pred EcCCchHHHHHHHHHHhcCCeeEecCcccchHHHHHHHHHcCCCEEEehHHHHHHHhhhhhccccccccEEEEehhhhh-
Confidence 9999999999999999999999999999999999999999999999999877666554432211 11133333321100
Q ss_pred cCCccCCCCCceEeeHHHHHhcC----CC-----CCCCCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHHHHHHHhh
Q 004977 240 DSGVSGGISNWTVSSFSEVEKLG----KR-----SPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTL 310 (721)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~----~~-----~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~ 310 (721)
..+.+..... .. .........++|+++|+|||||||.||||++||+++..........
T Consensus 152 -------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~ 218 (539)
T PRK06334 152 -------------LSFWEKCRIGIYMSIPFEWLMRWFGVSDKDPEDVAVILFTSGTEKLPKGVPLTHANLLANQRACLKF 218 (539)
T ss_pred -------------ccHHHhhhhhhhhcCCchhhhhcccCCCCCcCCEEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHh
Confidence 0001100000 00 0001123567999999999999999999999999999988877777
Q ss_pred CCCCCCCcEEEeccChHHHHHHHH-HHHHHHhcceEeeCccccccccchhhccCccCcceeecceEEeechHHHHHHHHH
Q 004977 311 IPNPGRSDVYLAYLPLAHVLELAA-ESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREG 389 (721)
Q Consensus 311 ~~~~~~~d~~l~~~pl~h~~g~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~ 389 (721)
+ .++++|++++++|++|.+++.. .+.++..|+++++.... .+ +..++..|+++++|++.++|++++.|++.
T Consensus 219 ~-~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~vv~~~~~--~~-----~~~~~~~i~~~~~t~~~~~P~~~~~l~~~ 290 (539)
T PRK06334 219 F-SPKEDDVMMSFLPPFHAYGFNSCTLFPLLSGVPVVFAYNP--LY-----PKKIVEMIDEAKVTFLGSTPVFFDYILKT 290 (539)
T ss_pred c-CCCCCceEEEecchHhhhhhHHHHHHHHHcCCeEEEecCC--CC-----HHHHHHHHHHhCCcEEEecHHHHHHHHHh
Confidence 7 8889999999999999999865 67789999999873211 01 12223339999999999999999998764
Q ss_pred HHHHHHhhcchhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHHHHHHHhh
Q 004977 390 VVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICM 469 (721)
Q Consensus 390 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~~~~~~ 469 (721)
.... ....++||.+++||+++++++.+++.+.+
T Consensus 291 ~~~~-----------------------------------------------~~~~~~lr~i~~gG~~l~~~~~~~~~~~~ 323 (539)
T PRK06334 291 AKKQ-----------------------------------------------ESCLPSLRFVVIGGDAFKDSLYQEALKTF 323 (539)
T ss_pred hhhc-----------------------------------------------ccccccccEEEECCccCCHHHHHHHHHHC
Confidence 2110 00125899999999999999999998877
Q ss_pred -CCccccccccccccccccccCCCCC-CCCccCCCcCcceEEEEecCCCCcccCCCCCCcceEEEccccccccccCCCcc
Q 004977 470 -GAPIGQAYGLTETCAGSTFSEWDDP-SVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGK 547 (721)
Q Consensus 470 -g~~l~~~YG~TE~~~~~~~~~~~~~-~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~ 547 (721)
++.+++.||+||++.+++....... ..+++|+|+++++++|+|.+++.. +++|+.|||+|+|++++.|||++|+.
T Consensus 324 ~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~vG~p~~g~~v~i~d~~~~~~---~~~g~~Gel~v~g~~~~~GY~~~~~~ 400 (539)
T PRK06334 324 PHIQLRQGYGTTECSPVITINTVNSPKHESCVGMPIRGMDVLIVSEETKVP---VSSGETGLVLTRGTSLFSGYLGEDFG 400 (539)
T ss_pred CCCeEEecccccccCceEEeccCCCCCCCCcCceecCCCEEEEEcCCCCcc---CCCCceEEEEEecCcccccccCCccc
Confidence 6899999999999877665443322 346899999999999999555554 45889999999999999999999987
Q ss_pred cccccccCCCCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcccce------EEEEecCCCc
Q 004977 548 TSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYVDN------IMIHADPFHN 621 (721)
Q Consensus 548 t~~~f~~~~~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~~------~~V~g~~~~~ 621 (721)
+.... .++.|||+|||+|++|++|+|+|+||.||+||+ +|++|+|.|||++|.+||+|.+ ++|++.+++.
T Consensus 401 ~~~~~---~~~~~w~~TGD~g~~d~~G~l~~~GR~~d~ik~-~G~~v~p~eIE~~l~~~~~v~~~~~~~~~~v~~~~~~~ 476 (539)
T PRK06334 401 QGFVE---LGGETWYVTGDLGYVDRHGELFLKGRLSRFVKI-GAEMVSLEALESILMEGFGQNAADHAGPLVVCGLPGEK 476 (539)
T ss_pred cccee---eCCceeEECCCEEEECCCCeEEEEeccCCeEEE-CCEEECHHHHHHHHHHccCCccccccCceEEEcCCCCc
Confidence 65432 234489999999999999999999999999997 6999999999999999999998 8889988664
Q ss_pred -eEEEEEEcChHHHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCCCCCCCCccCcc
Q 004977 622 -YCVALVVPSHKALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEPWTPEAGLVTAA 700 (721)
Q Consensus 622 -~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~~~p~~~~~t~~ 700 (721)
.++++++.... .+++++++++..++.|++|+.+++++++ | +|++
T Consensus 477 ~~~~~~~~~~~~-----------------------------~~~~~~~l~~~~~~~~~~P~~i~~v~~l--P----~t~~ 521 (539)
T PRK06334 477 VRLCLFTTFPTS-----------------------------ISEVNDILKNSKTSSILKISYHHQVESI--P----MLGT 521 (539)
T ss_pred eEEEEEEeccCC-----------------------------hHHHHHHHHhcCCcccccchheeeeccc--c----cccC
Confidence 35555553211 1567788873358999999999999998 6 9999
Q ss_pred cccChHHHHHHHHHH
Q 004977 701 LKIKREQLKAKFKDD 715 (721)
Q Consensus 701 gKi~R~~l~~~~~~~ 715 (721)
|||+|++|++.....
T Consensus 522 GKi~r~~L~~~~~~~ 536 (539)
T PRK06334 522 GKPDYCSLNALAKSL 536 (539)
T ss_pred CcccHHHHHHHHHHh
Confidence 999999999876553
No 22
>PLN02654 acetate-CoA ligase
Probab=100.00 E-value=2.8e-71 Score=637.65 Aligned_cols=527 Identities=18% Similarity=0.186 Sum_probs=404.6
Q ss_pred CCHHHHHHHHHH-hCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEE
Q 004977 82 STMAALFEQSCK-SHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAI 160 (721)
Q Consensus 82 ~tl~~~~~~~a~-~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i 160 (721)
+..+++|+++++ .+|+++|+++.. ++ .+..+.+||+||.++++++|++|+++|+++||+|+|
T Consensus 88 N~~~~~l~~~~~~~~~~~~Al~~~~----------~~-------~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i 150 (666)
T PLN02654 88 NICYNCLDRNVEAGNGDKIAIYWEG----------NE-------PGFDASLTYSELLDRVCQLANYLKDVGVKKGDAVVI 150 (666)
T ss_pred eHHHHHHHHhhccCCCCCEEEEEEc----------CC-------CCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEE
Confidence 345778888876 499999998731 11 123357999999999999999999999999999999
Q ss_pred EccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccchh---------HHHhhhhcC----CCcc
Q 004977 161 LAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLK---------KLSAVSSSL----KTIK 227 (721)
Q Consensus 161 ~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~---------~~~~~~~~~----~~~~ 227 (721)
+++|++|+++++|||+++|++++|+++.++++++.++|++++++++|+++.... .+....... ..+.
T Consensus 151 ~~pn~~e~v~a~lA~~~~Gav~vpv~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~ 230 (666)
T PLN02654 151 YLPMLMELPIAMLACARIGAVHSVVFAGFSAESLAQRIVDCKPKVVITCNAVKRGPKTINLKDIVDAALDESAKNGVSVG 230 (666)
T ss_pred EcCCCHHHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHHHHHHhccccCCCcc
Confidence 999999999999999999999999999999999999999999999999876431 122211111 1112
Q ss_pred EEEEecCCCCCccCCccCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHH-HHH
Q 004977 228 NVIYFENDGSEKDSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVAT-AAA 306 (721)
Q Consensus 228 ~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~-~~~ 306 (721)
.++..+......... .... ......|+++.... ....+.....++|+++|+|||||||.||||+++|++++.. ...
T Consensus 231 ~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~d~~~ilyTSGTTG~PKgVv~sh~~~~~~~~~~ 307 (666)
T PLN02654 231 ICLTYENQLAMKRED-TKWQ-EGRDVWWQDVVPNY-PTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVYTATT 307 (666)
T ss_pred EEEEecccccccccc-cccc-cCCcccHHHHhhcC-CCCCCceecCCCCceEEEecCCCCCCCceEEecccHHHHHHHHH
Confidence 222222111000000 0000 01123355554321 1111223357899999999999999999999999998654 344
Q ss_pred HHhhCCCCCCCcEEEeccChHHHHHHHH-HHHHHHhcceEeeCccccccccchhhccCccCcceeecceEEeechHHHHH
Q 004977 307 IKTLIPNPGRSDVYLAYLPLAHVLELAA-ESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDR 385 (721)
Q Consensus 307 ~~~~~~~~~~~d~~l~~~pl~h~~g~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~ 385 (721)
....+ +++++|++++.+|++|+++... ++.+|+.|+++++.+....... +..++..|+++++|+++++|++++.
T Consensus 308 ~~~~~-~~~~~d~~~~~~~~~~~~g~~~~~~~~L~~G~tvvl~~~~~~~~~----~~~~~~~i~~~~vt~~~~~P~~~~~ 382 (666)
T PLN02654 308 FKYAF-DYKPTDVYWCTADCGWITGHSYVTYGPMLNGATVLVFEGAPNYPD----SGRCWDIVDKYKVTIFYTAPTLVRS 382 (666)
T ss_pred HHHhc-CCCCCcEEEEcCCchhhhhhHHHHHHHHHcCceEEEECCCCCCCC----HHHHHHHHHHhCCeEEEeCHHHHHH
Confidence 55556 8999999999999999998755 6778999999998443211111 2234444999999999999999999
Q ss_pred HHHHHHHHHHhhcchhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHHHHH
Q 004977 386 VREGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFI 465 (721)
Q Consensus 386 l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~~ 465 (721)
|.+...... .....++||.++++|+++++++.+++
T Consensus 383 l~~~~~~~~---------------------------------------------~~~~l~~Lr~i~~~Ge~l~~~~~~~~ 417 (666)
T PLN02654 383 LMRDGDEYV---------------------------------------------TRHSRKSLRVLGSVGEPINPSAWRWF 417 (666)
T ss_pred HHhhCcccc---------------------------------------------ccCChhheeEEEEecCCCCHHHHHHH
Confidence 875321000 01112589999999999999999999
Q ss_pred HHhhC---CccccccccccccccccccCCC--CCCCCccCCCcCcceEEEEecCCCCcccCCCCCCcceEEEcc--cccc
Q 004977 466 NICMG---APIGQAYGLTETCAGSTFSEWD--DPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGG--FNVT 538 (721)
Q Consensus 466 ~~~~g---~~l~~~YG~TE~~~~~~~~~~~--~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g--~~v~ 538 (721)
.+.+| +++.+.||+||+++..+...+. ..+++++|+|+||++++|+| ++|+.+ +.++.|||+|++ |+++
T Consensus 418 ~~~~g~~~~~i~~~yg~TE~g~~~~~~~~~~~~~~~gs~G~p~~g~~v~i~d-~~g~~~---~~~~~Gel~v~~~~p~~~ 493 (666)
T PLN02654 418 FNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVD-EKGKEI---EGECSGYLCVKKSWPGAF 493 (666)
T ss_pred HHHhCCCCCceeccccccccCCeeeccCCCCCCCCCCccCCCCCCceEEEEC-CCCCCC---CCCCceEEEEcCCCchhh
Confidence 88887 6899999999998766544332 23568999999999999999 666654 366789999999 7899
Q ss_pred ccccCCCcccccccccCCCCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcccceEEEEecC
Q 004977 539 AGYFNNPGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYVDNIMIHADP 618 (721)
Q Consensus 539 ~gY~~~~~~t~~~f~~~~~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~ 618 (721)
.|||+|++.+.+.|....+ |||+|||+|++|+||+++|+||+||+||+ +|+||+|.|||++|.+||+|.+++|+|.+
T Consensus 494 ~gy~~~~~~~~~~~~~~~~--g~~~TGD~~~~d~dG~l~i~GR~dd~I~~-~G~ri~p~EIE~~l~~~p~V~eaaVvg~~ 570 (666)
T PLN02654 494 RTLYGDHERYETTYFKPFA--GYYFSGDGCSRDKDGYYWLTGRVDDVINV-SGHRIGTAEVESALVSHPQCAEAAVVGIE 570 (666)
T ss_pred hhhcCChHHHHHhhhhcCC--CEEEeCceEEECCCCcEEEeeeccCeEEe-CCEEECHHHHHHHHHhCCCeeeEEEEeeE
Confidence 9999999998887642124 89999999999999999999999999997 59999999999999999999999999998
Q ss_pred CCc---eEEEEEEcChHHHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCCCCCCCC
Q 004977 619 FHN---YCVALVVPSHKALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEPWTPEAG 695 (721)
Q Consensus 619 ~~~---~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~~~p~~~ 695 (721)
++. .++|+|++.++. .. .+++.++|+++++ .+|++|++|+.|++++++ |
T Consensus 571 d~~~ge~~~a~Vvl~~~~----------~~------------~~~l~~~l~~~~~-~~L~~~~~P~~i~~v~~l--P--- 622 (666)
T PLN02654 571 HEVKGQGIYAFVTLVEGV----------PY------------SEELRKSLILTVR-NQIGAFAAPDKIHWAPGL--P--- 622 (666)
T ss_pred cCCCCeEEEEEEEECCCC----------CC------------CHHHHHHHHHHHH-HhCCCCcCCCEEEECCCC--C---
Confidence 763 689999987642 10 1234567888888 899999999999999988 6
Q ss_pred ccCcccccChHHHHHHHHH
Q 004977 696 LVTAALKIKREQLKAKFKD 714 (721)
Q Consensus 696 ~~t~~gKi~R~~l~~~~~~ 714 (721)
+|.+||++|++|++.+.+
T Consensus 623 -~T~sGKi~r~~l~~~~~~ 640 (666)
T PLN02654 623 -KTRSGKIMRRILRKIASR 640 (666)
T ss_pred -CCCCcCchHHHHHHHHcC
Confidence 999999999999998764
No 23
>PRK07788 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.9e-71 Score=626.84 Aligned_cols=493 Identities=19% Similarity=0.257 Sum_probs=406.7
Q ss_pred CCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEE
Q 004977 82 STMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAIL 161 (721)
Q Consensus 82 ~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~ 161 (721)
.|+.++|+++++++||++|+++ ++ +.+||+||.++++++|++|.+.|+++||+|+|+
T Consensus 49 ~~~~~~~~~~a~~~pd~~Al~~------------~~-----------~~~Ty~el~~~~~~la~~L~~~gi~~gd~V~i~ 105 (549)
T PRK07788 49 GPFAGLVAHAARRAPDRAALID------------ER-----------GTLTYAELDEQSNALARGLLALGVRAGDGVAVL 105 (549)
T ss_pred chHHHHHHHHHHHCCCceEEEE------------CC-----------CceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEE
Confidence 4899999999999999999985 22 269999999999999999999999999999999
Q ss_pred ccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccchhHHHhhhhcCCCccEEEEecCCCCCccC
Q 004977 162 AETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEKDS 241 (721)
Q Consensus 162 ~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~ 241 (721)
++|+++|+++++||+++|+++||+++.++.+++.+++++++++++|++++..+.+..+....+.+..++.......
T Consensus 106 ~~n~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 181 (549)
T PRK07788 106 ARNHRGFVLALYAAGKVGARIILLNTGFSGPQLAEVAAREGVKALVYDDEFTDLLSALPPDLGRLRAWGGNPDDDE---- 181 (549)
T ss_pred cCCCHHHHHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHhcCCcEEEECchhHHHHHhhccccccceEEEEecCccc----
Confidence 9999999999999999999999999999999999999999999999998877766655444555544443222111
Q ss_pred CccCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHHHHHHHhhCCCCCCCcEEE
Q 004977 242 GVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNPGRSDVYL 321 (721)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~d~~l 321 (721)
.....+.+++++....... +.....++.++++|||||||.||||+++|+++.+.+......+ .+.++|+++
T Consensus 182 -----~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~-~~~~~d~~~ 252 (549)
T PRK07788 182 -----PSGSTDETLDDLIAGSSTA---PLPKPPKPGGIVILTSGTTGTPKGAPRPEPSPLAPLAGLLSRV-PFRAGETTL 252 (549)
T ss_pred -----cCCcCcccHHHHhcCCCCC---CCCCCCCCCcEEEECCCCCCCCCEEeccCccHHHHHHHHHhhC-CCCcCCeEE
Confidence 0112345677766532221 2223457889999999999999999999999999988887777 888999999
Q ss_pred eccChHHHHHHHHHHHHHHhcceEeeC---ccccccccchhhccCccCcceeecceEEeechHHHHHHHHHHHHHHHhhc
Q 004977 322 AYLPLAHVLELAAESIMLCAGCAIGYG---STLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKG 398 (721)
Q Consensus 322 ~~~pl~h~~g~~~~~~~l~~G~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~ 398 (721)
..+|++|.+++...+.++..|+++++. ++..+.+. ++++++|++.++|+++..+.+......
T Consensus 253 ~~~p~~~~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~~-----------i~~~~vt~~~~~P~~~~~l~~~~~~~~---- 317 (549)
T PRK07788 253 LPAPMFHATGWAHLTLAMALGSTVVLRRRFDPEATLED-----------IAKHKATALVVVPVMLSRILDLGPEVL---- 317 (549)
T ss_pred EccchHHHHHHHHHHHHHHhCCEEEECCCCCHHHHHHH-----------HHHhCCcEEEEHHHHHHHHHhCccccc----
Confidence 999999999998778889999999884 33334333 999999999999999999875321100
Q ss_pred chhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHHHHHHHhhCCccccccc
Q 004977 399 GLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMGAPIGQAYG 478 (721)
Q Consensus 399 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~~~~~~g~~l~~~YG 478 (721)
.....++||.+++||+++++++.+.+.+.++.+++|.||
T Consensus 318 -----------------------------------------~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG 356 (549)
T PRK07788 318 -----------------------------------------AKYDTSSLKIIFVSGSALSPELATRALEAFGPVLYNLYG 356 (549)
T ss_pred -----------------------------------------CCCCCCceeEEEEeCCCCCHHHHHHHHHHhCccceeccC
Confidence 000125899999999999999999999988999999999
Q ss_pred cccccccccccCCC-CCCCCccCCCcCcceEEEEecCCCCcccCCCCCCcceEEEccccccccccCCCcccccccccCCC
Q 004977 479 LTETCAGSTFSEWD-DPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVDER 557 (721)
Q Consensus 479 ~TE~~~~~~~~~~~-~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~~~ 557 (721)
+||++..+.....+ ....+++|+|+++++++|+| +++..+ ++|+.|||+|+|+.++.||+++++. . . .+
T Consensus 357 ~TE~~~~~~~~~~~~~~~~~~vG~~~~~~~~~i~d-~~~~~~---~~g~~Gel~v~g~~~~~gY~~~~~~--~-~---~~ 426 (549)
T PRK07788 357 STEVAFATIATPEDLAEAPGTVGRPPKGVTVKILD-ENGNEV---PRGVVGRIFVGNGFPFEGYTDGRDK--Q-I---ID 426 (549)
T ss_pred cchhchhhccChhhhhhcCCCcccCCCCcEEEEEC-CCcCCC---CCCCeEEEEEeCCCccccccCCCcc--c-c---cC
Confidence 99998655433222 23457899999999999999 566554 4689999999999999999998865 2 2 45
Q ss_pred CcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcccceEEEEecCCCc---eEEEEEEcChHHH
Q 004977 558 GMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYVDNIMIHADPFHN---YCVALVVPSHKAL 634 (721)
Q Consensus 558 g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~~---~~~a~vv~~~~~~ 634 (721)
|||+|||+|++|+||+++|+||.||+||+ +|++|+|.+||++|.+||+|.+|+|++.+++. .++|+|++.++.
T Consensus 427 --g~~~TGDl~~~~~~g~l~~~GR~dd~i~~-~G~~v~p~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~vv~~~~~- 502 (549)
T PRK07788 427 --GLLSSGDVGYFDEDGLLFVDGRDDDMIVS-GGENVFPAEVEDLLAGHPDVVEAAVIGVDDEEFGQRLRAFVVKAPGA- 502 (549)
T ss_pred --CceecCceEEEcCCCCEEEeccCcceEEE-CCEEECHHHHHHHHHhCCCeeEEEEECCcCcccccEEEEEEEeCCCC-
Confidence 89999999999999999999999999996 69999999999999999999999999988764 589999986532
Q ss_pred HHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCCCCCCCCccCcccccChHHHHHH
Q 004977 635 EKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEPWTPEAGLVTAALKIKREQLKAK 711 (721)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~~~p~~~~~t~~gKi~R~~l~~~ 711 (721)
..+ .++|+++++ ++|++|++|+.|++++++ | +|++||++|++|+++
T Consensus 503 -------~~~-----------------~~~l~~~~~-~~l~~~~~P~~i~~v~~l--P----~t~~GKi~r~~L~~~ 548 (549)
T PRK07788 503 -------ALD-----------------EDAIKDYVR-DNLARYKVPRDVVFLDEL--P----RNPTGKVLKRELREM 548 (549)
T ss_pred -------CCC-----------------HHHHHHHHH-HhhhcCCCCcEEEEeCCC--C----CCCCcCEeHHHhhcc
Confidence 000 267888888 899999999999999987 6 999999999999753
No 24
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=100.00 E-value=7.2e-71 Score=633.49 Aligned_cols=524 Identities=19% Similarity=0.215 Sum_probs=414.0
Q ss_pred CCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEE
Q 004977 82 STMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAIL 161 (721)
Q Consensus 82 ~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~ 161 (721)
+..+++|+++++++|+++|+++.. .. .+..+.+||+||.++++++|++|+++|+++||+|+++
T Consensus 57 n~~~~~l~~~~~~~p~~~Al~~~~-----------~~------~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~ 119 (625)
T TIGR02188 57 NVSYNCVDRHLEARPDKVAIIWEG-----------DE------PGEVRKITYRELHREVCRFANVLKSLGVKKGDRVAIY 119 (625)
T ss_pred EHHHHHHHHhhccCCCCeEEEEEc-----------CC------CCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEE
Confidence 467888888999999999998742 10 1334689999999999999999999999999999999
Q ss_pred ccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccc---------hhHHHhhhhcCC-CccEEEE
Q 004977 162 AETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQ---------LKKLSAVSSSLK-TIKNVIY 231 (721)
Q Consensus 162 ~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~---------~~~~~~~~~~~~-~~~~ii~ 231 (721)
++|++++++++|||+++|++++|+++.++++++.+++++++++++|+++.. .+.+......++ .++.++.
T Consensus 120 ~~n~~e~~~~~lA~~~~Gav~v~i~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (625)
T TIGR02188 120 MPMIPEAAIAMLACARIGAIHSVVFGGFSAEALADRINDAGAKLVITADEGLRGGKVIPLKAIVDEALEKCPVSVEHVLV 199 (625)
T ss_pred CCCCHHHHHHHHHHHHhCCEEeccCCCCCHHHHHHHHHhcCCCEEEEcCccccCCcccchHHHHHHHHHhCCCCccEEEE
Confidence 999999999999999999999999999999999999999999999998753 233444444555 5676776
Q ss_pred ecCCCCCccCCccCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHHHHHH-Hhh
Q 004977 232 FENDGSEKDSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAI-KTL 310 (721)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~-~~~ 310 (721)
++...... ... ......++++..... ....+....++|+++|+|||||||.||||+++|++++...... ...
T Consensus 200 ~~~~~~~~-----~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~il~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~ 272 (625)
T TIGR02188 200 VRRTGNPV-----PWV-EGRDVWWHDLMAKAS-AYCEPEPMDSEDPLFILYTSGSTGKPKGVLHTTGGYLLYAAMTMKYV 272 (625)
T ss_pred EcCCCCCc-----Ccc-ccccccHHHHHhhcC-CCCCceecCCCCceEEEecCCCCCCCCeEEECccHhHHHHHHHHHhc
Confidence 65332110 000 011234666554322 1222345678999999999999999999999999987655443 334
Q ss_pred CCCCCCCcEEEeccChHHHHHHHH-HHHHHHhcceEeeCccccccccchhhccCccCcceeecceEEeechHHHHHHHHH
Q 004977 311 IPNPGRSDVYLAYLPLAHVLELAA-ESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREG 389 (721)
Q Consensus 311 ~~~~~~~d~~l~~~pl~h~~g~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~ 389 (721)
+ ++.++|++++.+|++|+.+... ++.+|..|+++++.+....... +..++..++++++|++.++|++++.|.+.
T Consensus 273 ~-~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~t~vl~~~~~~~~~----~~~~~~~i~~~~vt~~~~~P~~~~~l~~~ 347 (625)
T TIGR02188 273 F-DIKDGDIFWCTADVGWITGHSYIVYGPLANGATTVMFEGTPTYPD----PGRFWEIIEKHKVTIFYTAPTAIRALMRL 347 (625)
T ss_pred c-CCCCCcEEEECCCchhhhccHHHHHHHHHcCCeEEEECCCCCCCC----hhHHHHHHHHhCCeEEEeCHHHHHHHHhc
Confidence 5 8889999999999999988654 6778999999988432111111 22334449999999999999999998753
Q ss_pred HHHHHHhhcchhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHHHHHHHhh
Q 004977 390 VVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICM 469 (721)
Q Consensus 390 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~~~~~~ 469 (721)
.... .+....++||.+++||+++++++.+++.+.+
T Consensus 348 ~~~~---------------------------------------------~~~~~l~~lr~i~~~G~~l~~~~~~~~~~~~ 382 (625)
T TIGR02188 348 GDEW---------------------------------------------VKKHDLSSLRLLGSVGEPINPEAWMWYYKVV 382 (625)
T ss_pred CCcc---------------------------------------------cccCCccceeEEEEecCCCCHHHHHHHHHHc
Confidence 1110 0111235899999999999999999998887
Q ss_pred C---CccccccccccccccccccCCC--CCCCCccCCCcCcceEEEEecCCCCcccCCCCCCcceEEEcc--cccccccc
Q 004977 470 G---APIGQAYGLTETCAGSTFSEWD--DPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGG--FNVTAGYF 542 (721)
Q Consensus 470 g---~~l~~~YG~TE~~~~~~~~~~~--~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g--~~v~~gY~ 542 (721)
+ +++++.||+||+++.++..... ..+.+++|+|+||++++|+| ++|+.++ ++|+.|||+|+| |+++.|||
T Consensus 383 ~~~~~~i~~~yG~TE~~~~~~~~~~~~~~~~~~~~G~p~~g~~~~i~d-~~g~~~~--~~g~~GeL~v~~p~p~~~~gy~ 459 (625)
T TIGR02188 383 GKERCPIVDTWWQTETGGIMITPLPGATPTKPGSATLPFFGIEPAVVD-EEGNPVE--GPGEGGYLVIKQPWPGMLRTIY 459 (625)
T ss_pred CCCCCceEecccccccCCceeecCCCCCCcCCCcccCCcCCceEEEEC-CCCCCCC--CCCCeEEEEEccCCCccccccc
Confidence 5 7899999999998765543322 33568999999999999999 6665432 278899999999 68999999
Q ss_pred CCCcccccccccCCCCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcccceEEEEecCCC--
Q 004977 543 NNPGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYVDNIMIHADPFH-- 620 (721)
Q Consensus 543 ~~~~~t~~~f~~~~~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~-- 620 (721)
++++.+.+.+....+ |||+|||+|++|+||+++|+||+||+||+ +|++|+|.|||++|.+||+|.+|+|++.+++
T Consensus 460 ~~~~~~~~~~~~~~~--g~~~TGDl~~~d~dG~l~i~GR~dd~i~~-~G~ri~p~eIE~~l~~~p~V~e~~vvg~~~~~~ 536 (625)
T TIGR02188 460 GDHERFVDTYFSPFP--GYYFTGDGARRDKDGYIWITGRVDDVINV-SGHRLGTAEIESALVSHPAVAEAAVVGIPDDIK 536 (625)
T ss_pred CChHHHHHHHhccCC--CEEECCceEEEcCCCcEEEEecccCEEEe-CCEEECHHHHHHHHHhCCCcceEEEEeeEcCCC
Confidence 999988887752234 89999999999999999999999999997 5999999999999999999999999998765
Q ss_pred -ceEEEEEEcChHHHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCCCCCCCCccCc
Q 004977 621 -NYCVALVVPSHKALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEPWTPEAGLVTA 699 (721)
Q Consensus 621 -~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~~~p~~~~~t~ 699 (721)
+.++|+|++.++. .. .+.+.++|+++++ .+|++|++|+.|++++++ | +|+
T Consensus 537 g~~~~a~vv~~~~~----------~~------------~~~~~~~l~~~~~-~~l~~~~~P~~i~~v~~l--P----~t~ 587 (625)
T TIGR02188 537 GQAIYAFVTLKDGY----------EP------------DDELRKELRKHVR-KEIGPIAKPDKIRFVPGL--P----KTR 587 (625)
T ss_pred CeEEEEEEEeCCCC----------CC------------CHHHHHHHHHHHH-hhcCCCccCcEEEECCCC--C----CCC
Confidence 4689999987642 00 0123477888888 899999999999999988 6 999
Q ss_pred ccccChHHHHHHHHH
Q 004977 700 ALKIKREQLKAKFKD 714 (721)
Q Consensus 700 ~gKi~R~~l~~~~~~ 714 (721)
+||++|+.|++.+..
T Consensus 588 sGKi~r~~l~~~~~~ 602 (625)
T TIGR02188 588 SGKIMRRLLRKIAAG 602 (625)
T ss_pred CccchHHHHHHHHcC
Confidence 999999999998754
No 25
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=100.00 E-value=1.2e-70 Score=630.66 Aligned_cols=529 Identities=16% Similarity=0.173 Sum_probs=407.0
Q ss_pred CCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEE
Q 004977 82 STMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAIL 161 (721)
Q Consensus 82 ~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~ 161 (721)
+..+++|+++++.+|+++|+++.. .. .+..+.+||+||.++++++|++|+++|+++||+|+|+
T Consensus 52 n~~~~~l~~~~~~~p~~~Al~~~~-----------~~------~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~Gd~V~i~ 114 (628)
T TIGR02316 52 NLCHNALDRHLDERGEQLALVTVS-----------SE------TGQERTLTYRQLHREVNVFASALRALGVGRGDRVLIY 114 (628)
T ss_pred eHHHHHHHHHhCcCCCCeEEEEEc-----------CC------CCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEE
Confidence 456788988899999999998741 11 1233579999999999999999999999999999999
Q ss_pred ccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccc---------hhHHHhhhhcC-CCccEEEE
Q 004977 162 AETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQ---------LKKLSAVSSSL-KTIKNVIY 231 (721)
Q Consensus 162 ~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~---------~~~~~~~~~~~-~~~~~ii~ 231 (721)
++|++++++++|||+++|++++|+++.++.+++.+++++++++++|+++.. .+.+....... +...+++.
T Consensus 115 ~~n~~e~v~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~ 194 (628)
T TIGR02316 115 MPMIAEAVFAMLACARIGAIHSVVFGGFASHSLALRIDDATPKLIVSADAGMRGGKVIPYKPLLDAAIAEAQHPPPHVLL 194 (628)
T ss_pred cCCCHHHHHHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEECCccccCCcccccHHHHHHHHHhcCCCCCEEEE
Confidence 999999999999999999999999999999999999999999999998643 12232222222 33456666
Q ss_pred ecCCCCCccCCccCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHH-HHHHHhh
Q 004977 232 FENDGSEKDSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVAT-AAAIKTL 310 (721)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~-~~~~~~~ 310 (721)
++...... ... ......++++.........+.....++++++|+|||||||.||||+++|++++.. .......
T Consensus 195 ~~~~~~~~----~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~ 268 (628)
T TIGR02316 195 VDRGLAPM----RLI--PGRDVDYAALRTQHEDAQVPVEWLESNEPSYILYTSGTTGKPKGVQRDVGGYAVALALSMWAI 268 (628)
T ss_pred EeCCCCCc----Ccc--cCccccHHHHhhccccCCCCceecCCCCcEEEEECCCCCCCCceEEECCcHHHHHHHHHHHHh
Confidence 65321110 000 0012356665543221112223346799999999999999999999999998644 3444555
Q ss_pred CCCCCCCcEEEeccChHHHHHHHH-HHHHHHhcceEeeCccccccccchhhccCccCcceeecceEEeechHHHHHHHHH
Q 004977 311 IPNPGRSDVYLAYLPLAHVLELAA-ESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREG 389 (721)
Q Consensus 311 ~~~~~~~d~~l~~~pl~h~~g~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~ 389 (721)
+ ++.++|++++.+|++|+.+... ++.+|+.|+++++.+....... +..++..++++++|+++++|++++.|.+.
T Consensus 269 ~-~~~~~d~~~~~~~~~~~~g~~~~~~~~L~~G~~~v~~~~~~~~~~----~~~~~~~i~~~~vt~~~~~P~~~~~l~~~ 343 (628)
T TIGR02316 269 F-GIRAGQVMFSASDVGWVVGHSYIVYAPLLAGAATVLYEGLPTNPD----PGVWWSIVERYGVRTMFSAPTAIRVLKKQ 343 (628)
T ss_pred c-CCCCCcEEEEcCCCCeeehhhHHHHHHHhccceEEEeCCCCCCCC----HHHHHHHHHHhCCeEEEeCHHHHHHHHhc
Confidence 6 8899999999999999988654 6788999999998542211111 22334449999999999999999987652
Q ss_pred HHHHHHhhcchhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHHHHHHHhh
Q 004977 390 VVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICM 469 (721)
Q Consensus 390 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~~~~~~ 469 (721)
.... .+....++||.+++||+++++++.+++...+
T Consensus 344 ~~~~---------------------------------------------~~~~~l~~lr~~~~gGe~l~~~~~~~~~~~~ 378 (628)
T TIGR02316 344 DAAW---------------------------------------------LRKHDLSSLHWLFLAGEPLDEPTAHWITDGL 378 (628)
T ss_pred CCcc---------------------------------------------cccCCccceeEEEEecCCCCHHHHHHHHHHh
Confidence 1100 0111235899999999999999999999888
Q ss_pred CCccccccccccccccccccCCC----CCCCCccCCCcCcceEEEEecCCCCcccCCCCCCcceEEEccc---ccccccc
Q 004977 470 GAPIGQAYGLTETCAGSTFSEWD----DPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGF---NVTAGYF 542 (721)
Q Consensus 470 g~~l~~~YG~TE~~~~~~~~~~~----~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~---~v~~gY~ 542 (721)
|..+++.||+||++..++..... ....+++|+|+||++++|+|.++|+.+ ++|+.|||+|+|| +++.|||
T Consensus 379 ~~~~~~~yG~TE~~~~~~~~~~~~~~~~~~~gs~G~p~~g~~v~i~d~~~g~~~---~~g~~Gel~v~gp~~~g~~~~~~ 455 (628)
T TIGR02316 379 GKPVIDNYWQTETGWPVLAIMPGLDLKPVKLGSPGLPMYGYHLRVLDEATGRPC---GPNEKGVLTVVPPLPPGCLSTVW 455 (628)
T ss_pred CCCEEecccccccCceeecCCCCCCcCCCCCCCcccCcCCceEEEEECCCCCCC---CCCCcEEEEEecCCCcccccccc
Confidence 99999999999998544332221 234588999999999999995467654 4789999999998 5789999
Q ss_pred CCCcccccccccC-CCCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcccceEEEEecCCCc
Q 004977 543 NNPGKTSEVYKVD-ERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYVDNIMIHADPFHN 621 (721)
Q Consensus 543 ~~~~~t~~~f~~~-~~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~~ 621 (721)
++++.+.+.+... .+ +||+|||+|++|+||+|+|+||.||+||+ +|+||+|.|||++|.+||+|.+|+|++.+++.
T Consensus 456 ~~~~~~~~~~~~~~~~--~~~~TGD~g~~d~dG~l~i~GR~dd~ik~-~G~rv~~~eIE~~l~~~p~V~ea~Vvg~~d~~ 532 (628)
T TIGR02316 456 GDDARFLKTYWSHFKR--PLYSSFDWGIRDEDGYTFILGRTDDVINV-AGHRLGTREIEESVSSHPSVAEVAVVGVHDEL 532 (628)
T ss_pred CChHHHHHhhhhcCCC--CEEECCceEEEcCCCcEEEEEcCcceEEe-CCEEeCHHHHHHHHHhCCCcceEEEEeeecCC
Confidence 9998877765311 23 79999999999999999999999999997 59999999999999999999999999998753
Q ss_pred ---eEEEEEEcChHHHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCCCCCCCCccC
Q 004977 622 ---YCVALVVPSHKALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEPWTPEAGLVT 698 (721)
Q Consensus 622 ---~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~~~p~~~~~t 698 (721)
.++++|++.++.. .. +......+.++|+++++ .+|++|++|+.|++++++ | +|
T Consensus 533 ~g~~~~~~vv~~~~~~--------~~---------~~~~~~~~~~~i~~~~~-~~L~~~~~P~~v~~v~~l--P----~t 588 (628)
T TIGR02316 533 KGQVAVVFAILKESDS--------AG---------DAHDPHAVETGMMDCVV-RQLGAVARPARVYFVAAL--P----KT 588 (628)
T ss_pred CCeEEEEEEEEcCCcc--------cc---------cccchHHHHHHHHHHHH-HhcCCCcCCCEEEEcCCC--C----CC
Confidence 5889998765320 00 00001234578889998 899999999999999998 6 99
Q ss_pred cccccChHHHHHHHH
Q 004977 699 AALKIKREQLKAKFK 713 (721)
Q Consensus 699 ~~gKi~R~~l~~~~~ 713 (721)
++||++|+.|++.+.
T Consensus 589 ~sGKi~r~~L~~~~~ 603 (628)
T TIGR02316 589 RSGKLLRRSIQALAE 603 (628)
T ss_pred CchHHHHHHHHHHHc
Confidence 999999999998764
No 26
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.9e-70 Score=628.42 Aligned_cols=521 Identities=19% Similarity=0.231 Sum_probs=410.8
Q ss_pred CHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEc
Q 004977 83 TMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAILA 162 (721)
Q Consensus 83 tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~ 162 (721)
...++|+++++++|+++|+++.. .. .+..+.+||+||.++++++|++|+++|+++||+|+|++
T Consensus 68 ~~~~~l~~~~~~~p~~~Al~~~~-----------~~------~~~~~~lTy~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~ 130 (637)
T PRK00174 68 VSYNCLDRHLKTRGDKVAIIWEG-----------DD------PGDSRKITYRELHREVCRFANALKSLGVKKGDRVAIYM 130 (637)
T ss_pred HHHHHHHHhhccCCCCeEEEEEC-----------CC------CCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEc
Confidence 34678888999999999998732 10 12345799999999999999999999999999999999
Q ss_pred cCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccch---------hHHHhhhhcCCCccEEEEec
Q 004977 163 ETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQL---------KKLSAVSSSLKTIKNVIYFE 233 (721)
Q Consensus 163 ~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~---------~~~~~~~~~~~~~~~ii~~~ 233 (721)
+|++++++++|||+++|++++|+++.++.+++.+++++++++++|+++... +.+......++.++.++.++
T Consensus 131 ~n~~e~~~~~lA~~~~Gav~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (637)
T PRK00174 131 PMIPEAAVAMLACARIGAVHSVVFGGFSAEALADRIIDAGAKLVITADEGVRGGKPIPLKANVDEALANCPSVEKVIVVR 210 (637)
T ss_pred CCCHHHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCCcEEEEcCccccCCcccchHHHHHHHHHhCCCccEEEEEc
Confidence 999999999999999999999999999999999999999999999987542 33344444556677777665
Q ss_pred CCCCCccCCccCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHHHHH-HHhhCC
Q 004977 234 NDGSEKDSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAA-IKTLIP 312 (721)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~-~~~~~~ 312 (721)
...... .. .......++++.... ..........++|+++|+|||||||.||||+++|++++..... ....+
T Consensus 211 ~~~~~~-----~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~- 282 (637)
T PRK00174 211 RTGGDV-----DW-VEGRDLWWHELVAGA-SDECEPEPMDAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAAMTMKYVF- 282 (637)
T ss_pred CCCCCc-----Cc-CCCCcccHHHHHhhc-CCCCCccccCCCCcEEEEECCCCCCCCceEEeCcchhHHHHHHHHHhcc-
Confidence 432110 00 001223466665432 1222234456789999999999999999999999998765543 33345
Q ss_pred CCCCCcEEEeccChHHHHHHHH-HHHHHHhcceEeeCccc-cccccchhhccCccCcceeecceEEeechHHHHHHHHHH
Q 004977 313 NPGRSDVYLAYLPLAHVLELAA-ESIMLCAGCAIGYGSTL-TMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGV 390 (721)
Q Consensus 313 ~~~~~d~~l~~~pl~h~~g~~~-~~~~l~~G~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~ 390 (721)
++.++|++++.+|++|..+... ++.+|+.|+++++.+.. ...+ ...++..++++++|++.++|++++.|.+..
T Consensus 283 ~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~-----~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~ 357 (637)
T PRK00174 283 DYKDGDVYWCTADVGWVTGHSYIVYGPLANGATTLMFEGVPNYPD-----PGRFWEVIDKHKVTIFYTAPTAIRALMKEG 357 (637)
T ss_pred CCCCCcEEEEcCCchHhhhhHHHHHHHHHcCCEEEEECCCCCCCC-----hHHHHHHHHhcCCeEEeecHHHHHHHHhcC
Confidence 8888999999999999988754 67789999999884321 1111 122344499999999999999999887531
Q ss_pred HHHHHhhcchhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHHHHHHHhhC
Q 004977 391 VKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMG 470 (721)
Q Consensus 391 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~~~~~~g 470 (721)
.... .....++||.+++||+++++++.+++.+.++
T Consensus 358 ~~~~---------------------------------------------~~~~~~~lr~i~~~Ge~l~~~~~~~~~~~~~ 392 (637)
T PRK00174 358 DEHP---------------------------------------------KKYDLSSLRLLGSVGEPINPEAWEWYYKVVG 392 (637)
T ss_pred Cccc---------------------------------------------ccCCccceeEEEEeCCCCCHHHHHHHHHHhC
Confidence 1000 0112258999999999999999999888775
Q ss_pred ---CccccccccccccccccccCCC--CCCCCccCCCcCcceEEEEecCCCCcccCCCCCCcceEEEcc--ccccccccC
Q 004977 471 ---APIGQAYGLTETCAGSTFSEWD--DPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGG--FNVTAGYFN 543 (721)
Q Consensus 471 ---~~l~~~YG~TE~~~~~~~~~~~--~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g--~~v~~gY~~ 543 (721)
+++++.||+||++..++..... ..+.+++|+|+||++++|+| ++|..+ ++|+.|||+|+| |++++|||+
T Consensus 393 ~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~vG~p~~g~~~~i~d-~~g~~~---~~g~~Gel~v~g~~p~~~~gy~~ 468 (637)
T PRK00174 393 GERCPIVDTWWQTETGGIMITPLPGATPLKPGSATRPLPGIQPAVVD-EEGNPL---EGGEGGNLVIKDPWPGMMRTIYG 468 (637)
T ss_pred CCCCceEecccccccCCceEecCCCCCCcCCCcccCCCCCceEEEEC-CCCCCC---CCCCcEEEEEcCCCCcccccccC
Confidence 7899999999998765543322 23457999999999999999 666654 478999999999 689999999
Q ss_pred CCcccccccccCCCCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcccceEEEEecCCC---
Q 004977 544 NPGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYVDNIMIHADPFH--- 620 (721)
Q Consensus 544 ~~~~t~~~f~~~~~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~--- 620 (721)
+++.+.+.+....+ |||+|||+|++|+||+++|+||+||+||+ +|++|+|.|||++|.+||+|.+|+|++.+++
T Consensus 469 ~~~~~~~~~~~~~~--g~~~TGDl~~~d~dG~l~~~GR~dd~ik~-~G~~v~p~eIE~~l~~~~~V~~~~Vvg~~~~~~g 545 (637)
T PRK00174 469 DHERFVKTYFSTFK--GMYFTGDGARRDEDGYYWITGRVDDVLNV-SGHRLGTAEIESALVAHPKVAEAAVVGRPDDIKG 545 (637)
T ss_pred CHHHHHHhhhcCCC--CEEECCceEEEcCCCcEEEEEecccEEEe-CCEEECHHHHHHHHHhCCCcceEEEEeeEcCCCC
Confidence 99988877642234 89999999999999999999999999998 5999999999999999999999999998765
Q ss_pred ceEEEEEEcChHHHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCCCCCCCCccCcc
Q 004977 621 NYCVALVVPSHKALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEPWTPEAGLVTAA 700 (721)
Q Consensus 621 ~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~~~p~~~~~t~~ 700 (721)
+.++|+|++.++. .. .+.+.++|+++++ ++|+.|++|+.|++++++ | +|++
T Consensus 546 ~~~~a~vv~~~~~----------~~------------~~~~~~~l~~~l~-~~l~~~~~P~~i~~v~~l--P----~t~~ 596 (637)
T PRK00174 546 QGIYAFVTLKGGE----------EP------------SDELRKELRNWVR-KEIGPIAKPDVIQFAPGL--P----KTRS 596 (637)
T ss_pred eEEEEEEEECCCC----------CC------------CHHHHHHHHHHHH-hhcCCccCCCEEEEcCCC--C----CCCC
Confidence 4689999987542 00 0223467888888 899999999999999988 6 9999
Q ss_pred cccChHHHHHHHHH
Q 004977 701 LKIKREQLKAKFKD 714 (721)
Q Consensus 701 gKi~R~~l~~~~~~ 714 (721)
||++|++|++.+.+
T Consensus 597 GKi~R~~L~~~~~~ 610 (637)
T PRK00174 597 GKIMRRILRKIAEG 610 (637)
T ss_pred cchHHHHHHHHHcC
Confidence 99999999988654
No 27
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=7.4e-72 Score=546.44 Aligned_cols=496 Identities=22% Similarity=0.316 Sum_probs=426.4
Q ss_pred CCCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEE
Q 004977 81 ASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAI 160 (721)
Q Consensus 81 ~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i 160 (721)
..|+.+++.++|+++||++|++ ||. +.+||+||+++++++|++|+++|+++||+|.+
T Consensus 27 d~~l~d~L~~~A~~~pdriAv~-------------d~~----------~~~sY~eLdqr~d~LAa~l~~lGi~~Gd~vlv 83 (542)
T COG1021 27 DRTLTDILTDHAARYPDRIAVI-------------DGE----------RRLSYAELDQRADRLAAGLRRLGIKPGDTVLV 83 (542)
T ss_pred CCcHHHHHHHHHhhcCCceEEe-------------cCc----------ccccHHHHHHHHHHHHHHHHhcCCCCCCEEEE
Confidence 4799999999999999999998 443 36999999999999999999999999999999
Q ss_pred EccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccc-----hhHHHhhhhcCCCccEEEEecCC
Q 004977 161 LAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQ-----LKKLSAVSSSLKTIKNVIYFEND 235 (721)
Q Consensus 161 ~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~-----~~~~~~~~~~~~~~~~ii~~~~~ 235 (721)
-++|..++++++||++++|+.+|.--|+....+|.+..+.++++.+|.+..+ .+...++....++++++++.++.
T Consensus 84 QLpN~~ef~~~~FALlrlGv~PVlALpsHr~~Ei~~f~~~~e~~~~i~~~~~~gFd~~~~ar~~~a~~~tlr~v~v~ge~ 163 (542)
T COG1021 84 QLPNVAEFYITFFALLRLGVAPVLALPSHRASELGAFASQIEAALLIVARQHSGFDYRPFARELVAKHPTLRHVIVAGEA 163 (542)
T ss_pred ECCchHHHHHHHHHHHHcCcchhhccchhhHHHHHHHHHhhcchheeechhhcccCcHHHHHHHHhhCCcceEEEEccCC
Confidence 9999999999999999999999999999999999999999999999998743 36677788889999999997543
Q ss_pred CCCccCCccCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHHHHHHHhhCCCCC
Q 004977 236 GSEKDSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNPG 315 (721)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~ 315 (721)
... ...+..+........+..+.+++++|++..+.||||.||-+..||.....+++...+.. +++
T Consensus 164 ~~~--------------~~~~~~~~~~a~~~~~a~~~~~~~vA~fqLSGGTTGtPKLIPRtH~DY~Ysv~aSaEiC-~~~ 228 (542)
T COG1021 164 EHP--------------SVLEAALCHPAGLFTPAPPADAGEVAFFQLSGGTTGTPKLIPRTHNDYYYSVRASAEIC-GFD 228 (542)
T ss_pred CCc--------------chhhhhhhCccccCCcCCCCCCCceEEEEecCCCCCCCccccccccceeeeeeehhhhh-CcC
Confidence 211 11122222222222333566788999999999999999999999999999999988888 999
Q ss_pred CCcEEEeccChHHHHHHHH--HHHHHHhcceEee---CccccccccchhhccCccCcceeecceEEeechHHHHHHHHHH
Q 004977 316 RSDVYLAYLPLAHVLELAA--ESIMLCAGCAIGY---GSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGV 390 (721)
Q Consensus 316 ~~d~~l~~~pl~h~~g~~~--~~~~l~~G~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~ 390 (721)
+.+++++.+|..|-|-+.. .+..++.|+++|+ .+|...+.. |+++++|+..+||.+...+++..
T Consensus 229 ~~tvyL~~LP~AHNfplssPG~LGv~~agG~VVla~~psp~~~F~l-----------Ierh~Vt~tALVPpla~LWlqa~ 297 (542)
T COG1021 229 QQTVYLCALPAAHNFPLSSPGALGVFLAGGTVVLAPDPSPELCFPL-----------IERHGVTVTALVPPLASLWLQAA 297 (542)
T ss_pred ccceEEEecccccCCCCCCcchhheeeeccEEEECCCCCHHHHHHH-----------HHHhccceEEeccHHHHHHHHhh
Confidence 9999999999999988765 6778999999999 444444444 99999999999999999888753
Q ss_pred HHHHHhhcchhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHHHHHHHhhC
Q 004977 391 VKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMG 470 (721)
Q Consensus 391 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~~~~~~g 470 (721)
.. +..+++|||.+-.||+.+++++.+++...+|
T Consensus 298 e~-----------------------------------------------~~~~LsSLrllQVGGarl~~~~Arrv~~~lg 330 (542)
T COG1021 298 EW-----------------------------------------------ERADLSSLRLLQVGGARLSATLARRVPAVLG 330 (542)
T ss_pred hc-----------------------------------------------ccCCchheeEEeecCcccCHHHHhhchhhhC
Confidence 32 1223479999999999999999999999999
Q ss_pred CccccccccccccccccccCCCCCC---CCccCCCc-CcceEEEEecCCCCcccCCCCCCcceEEEccccccccccCCCc
Q 004977 471 APIGQAYGLTETCAGSTFSEWDDPS---VGRVGPPV-PCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPG 546 (721)
Q Consensus 471 ~~l~~~YG~TE~~~~~~~~~~~~~~---~~~vG~p~-p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~ 546 (721)
+.+.|.+||.|.-.. +...+++. ..+-|+|+ |.-|++|+| ++|+++ ++|++|+|..+||..++|||+.|+
T Consensus 331 C~LQQVFGMAEGLvn--yTRLDDp~E~i~~TQGrPlsP~DEvrvvD-~dg~pv---~pGE~G~LltRGPYTirGYyrap~ 404 (542)
T COG1021 331 CQLQQVFGMAEGLVN--YTRLDDPPEIIIHTQGRPLSPDDEVRVVD-ADGNPV---APGEVGELLTRGPYTIRGYYRAPE 404 (542)
T ss_pred chHHHHhhhhhhhhc--ccccCCchHheeecCCCcCCCcceeEEec-CCCCCC---CCCCcceeeecCCeeeeeeccCch
Confidence 999999999996443 33444432 26889998 788999999 777765 499999999999999999999999
Q ss_pred ccccccccCCCCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcccceEEEEecCCC---ceE
Q 004977 547 KTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYVDNIMIHADPFH---NYC 623 (721)
Q Consensus 547 ~t~~~f~~~~~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~ 623 (721)
.++++|+ .+ |+|+|||++++|+||+|.+.||.||+|+ |+||+|..+|||+.|..||.|.+|++++.+|+ ++.
T Consensus 405 HNa~aF~--a~--GFYrsGD~V~~~~dGyl~V~GR~KDQIN-RgGEKIAAeEvEn~LL~HP~V~~AAlVampDelLGEks 479 (542)
T COG1021 405 HNARAFD--AD--GFYRSGDLVRRDPDGYLVVEGRVKDQIN-RGGEKIAAEEVENLLLRHPAVHDAALVAMPDELLGEKS 479 (542)
T ss_pred hhhhccC--cC--CceecCceeEecCCceEEEEeeehhhhc-cccchhhHHHHHHHHhhCchhhhhhhhcCchhhcCcce
Confidence 9999998 77 9999999999999999999999999999 89999999999999999999999999999986 568
Q ss_pred EEEEEcChHHHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCCCCCCCCccCccccc
Q 004977 624 VALVVPSHKALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEPWTPEAGLVTAALKI 703 (721)
Q Consensus 624 ~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~~~p~~~~~t~~gKi 703 (721)
+||||+++.... ..+|+.++.+..|..|++|++|++++.+ | +|+-|||
T Consensus 480 CAfiv~~~~~~~--------------------------~~qlr~~L~~~GlAa~K~PDrie~v~~~--P----~T~VGKI 527 (542)
T COG1021 480 CAFIVVKEPPLR--------------------------AAQLRRFLRERGLAAFKLPDRIEFVDSL--P----LTAVGKI 527 (542)
T ss_pred eEEEEecCCCCC--------------------------HHHHHHHHHHcchhhhcCCcceeecccC--C----Ccccccc
Confidence 899998765321 2678889988999999999999999998 6 8999999
Q ss_pred ChHHHHHHHHHH
Q 004977 704 KREQLKAKFKDD 715 (721)
Q Consensus 704 ~R~~l~~~~~~~ 715 (721)
|+++|++++...
T Consensus 528 dKk~Lr~~l~~~ 539 (542)
T COG1021 528 DKKALRRRLASR 539 (542)
T ss_pred cHHHHHHHhhhh
Confidence 999999987653
No 28
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=5.6e-69 Score=611.39 Aligned_cols=509 Identities=21% Similarity=0.256 Sum_probs=411.4
Q ss_pred CCCHHHHHHHHHH-hCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEE
Q 004977 81 ASTMAALFEQSCK-SHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAA 159 (721)
Q Consensus 81 ~~tl~~~~~~~a~-~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~ 159 (721)
.+.++++++++++ .+|+++|+.+.+ +. ..+.+||+||.++++++|++|.++|+++||+|+
T Consensus 42 ~~~~~~~~~~~~~~~~~~~~a~~~~~-----------~~--------~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~ 102 (570)
T PRK04319 42 VNIAYEAIDRHADGGRKDKVALRYLD-----------AS--------RKEKYTYKELKELSNKFANVLKELGVEKGDRVF 102 (570)
T ss_pred eeHHHHHHHHhhccCCCCceEEEEEC-----------CC--------CceeecHHHHHHHHHHHHHHHHHhCCCCCCEEE
Confidence 3556788988887 589999998742 11 124799999999999999999999999999999
Q ss_pred EEccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccchhHHHhhhhcCCCccEEEEecCCCCCc
Q 004977 160 ILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEK 239 (721)
Q Consensus 160 i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~ 239 (721)
|+++|+++|++++|||+++|++++|+++.++++++.+++++++++++|++......... ..++.++.++.++.....
T Consensus 103 i~~~n~~~~~~~~la~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~- 179 (570)
T PRK04319 103 IFMPRIPELYFALLGALKNGAIVGPLFEAFMEEAVRDRLEDSEAKVLITTPALLERKPA--DDLPSLKHVLLVGEDVEE- 179 (570)
T ss_pred EECCCCHHHHHHHHHHHHcCcEEcccccccCHHHHHHHHHccCCcEEEEChhhhhccch--hcCCCceEEEEECCCcCC-
Confidence 99999999999999999999999999999999999999999999999999876543321 245566666665533210
Q ss_pred cCCccCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHHHHHHHhhCCCCCCCcE
Q 004977 240 DSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNPGRSDV 319 (721)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~d~ 319 (721)
.....++.++...... ........++++++|+|||||||.||||+++|+++++.+......+ .+.++|+
T Consensus 180 ---------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~-~~~~~d~ 248 (570)
T PRK04319 180 ---------GPGTLDFNALMEQASD-EFDIEWTDREDGAILHYTSGSTGKPKGVLHVHNAMLQHYQTGKYVL-DLHEDDV 248 (570)
T ss_pred ---------CcCccCHHHHHhhcCC-cCCccccCCCCCEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhc-CCCCCce
Confidence 1123456665543222 1122344678999999999999999999999999998888777777 8899999
Q ss_pred EEeccChHHHHHHHH-HHHHHHhcceEeeCccccccccchhhccCccCcceeecceEEeechHHHHHHHHHHHHHHHhhc
Q 004977 320 YLAYLPLAHVLELAA-ESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKG 398 (721)
Q Consensus 320 ~l~~~pl~h~~g~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~ 398 (721)
+++..|++|.++... ++.++..|+++++.... .+ +..++..++++++|+++++|++++.+.+......
T Consensus 249 ~~~~~~~~~~~g~~~~~~~~l~~G~~~v~~~~~--~~-----~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~---- 317 (570)
T PRK04319 249 YWCTADPGWVTGTSYGIFAPWLNGATNVIDGGR--FS-----PERWYRILEDYKVTVWYTAPTAIRMLMGAGDDLV---- 317 (570)
T ss_pred EEecCChHHhhCchHHHHHHHhcCceEEEECCC--CC-----HHHHHHHHHHcCCeEEEeCHHHHHHHHhcCCccc----
Confidence 999999999988654 77889999998873211 01 1223333999999999999999999865211000
Q ss_pred chhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHHHHHHHhhCCccccccc
Q 004977 399 GLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMGAPIGQAYG 478 (721)
Q Consensus 399 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~~~~~~g~~l~~~YG 478 (721)
.....++||.+++||+++++++.+++.+.+|.++++.||
T Consensus 318 -----------------------------------------~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~g~~i~~~YG 356 (570)
T PRK04319 318 -----------------------------------------KKYDLSSLRHILSVGEPLNPEVVRWGMKVFGLPIHDNWW 356 (570)
T ss_pred -----------------------------------------ccCCcccceEEEEcccCCCHHHHHHHHHHhCCCeEecee
Confidence 001125899999999999999999999989999999999
Q ss_pred cccccccccccCCC-CCCCCccCCCcCcceEEEEecCCCCcccCCCCCCcceEEEcc--ccccccccCCCcccccccccC
Q 004977 479 LTETCAGSTFSEWD-DPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGG--FNVTAGYFNNPGKTSEVYKVD 555 (721)
Q Consensus 479 ~TE~~~~~~~~~~~-~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g--~~v~~gY~~~~~~t~~~f~~~ 555 (721)
+||++..++..... ....+++|+|+|+++++|+| +++..+ ++|+.|||+++| ++++.|||++++.|.+.|
T Consensus 357 ~tE~~~~~~~~~~~~~~~~~~~G~p~~g~~~~i~d-~~~~~~---~~g~~Gel~i~~~~~~~~~GY~~~~~~~~~~~--- 429 (570)
T PRK04319 357 MTETGGIMIANYPAMDIKPGSMGKPLPGIEAAIVD-DQGNEL---PPNRMGNLAIKKGWPSMMRGIWNNPEKYESYF--- 429 (570)
T ss_pred ecccCCEEEecCCCCCCCCCcCcCCCCCCEEEEEC-CCCCCC---CCCCceEEEEcCCCChHHhHhcCCHHHhhhhh---
Confidence 99998765543332 33568999999999999999 555543 588999999997 899999999999999998
Q ss_pred CCCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcccceEEEEecCCC---ceEEEEEEcChH
Q 004977 556 ERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYVDNIMIHADPFH---NYCVALVVPSHK 632 (721)
Q Consensus 556 ~~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~~a~vv~~~~ 632 (721)
.+ |||+|||+|++|++|+++|+||+||+||+ +|++|+|.|||++|.+||.|.+++|++.+++ +.++|+|++.++
T Consensus 430 ~~--gw~~TGDl~~~~~~g~l~~~GR~~d~i~~-~G~~i~p~eIE~~l~~~~~V~~~~v~g~~~~~~g~~~~a~v~~~~~ 506 (570)
T PRK04319 430 AG--DWYVSGDSAYMDEDGYFWFQGRVDDVIKT-SGERVGPFEVESKLMEHPAVAEAGVIGKPDPVRGEIIKAFVALRPG 506 (570)
T ss_pred cC--CceEeCcEEEECCCeeEEEEecCCCEEEE-CCEEECHHHHHHHHhhCCCeeecceecccCcCCceEEEEEEEECCC
Confidence 56 89999999999999999999999999997 6999999999999999999999999998865 358888887653
Q ss_pred HHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCCCCCCCCccCcccccChHHHHHHH
Q 004977 633 ALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEPWTPEAGLVTAALKIKREQLKAKF 712 (721)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~~~p~~~~~t~~gKi~R~~l~~~~ 712 (721)
. .. .+.+.++|+++++ ++|+.|++|+.|++++++ | +|++||++|++|+++.
T Consensus 507 ~----------~~------------~~~~~~~l~~~~~-~~l~~~~~P~~i~~v~~i--P----~t~~GKv~r~~L~~~~ 557 (570)
T PRK04319 507 Y----------EP------------SEELKEEIRGFVK-KGLGAHAAPREIEFKDKL--P----KTRSGKIMRRVLKAWE 557 (570)
T ss_pred C----------CC------------CHHHHHHHHHHHH-HhcccccCCcEEEEeCCC--C----CCCchhhhHHHHHHHH
Confidence 2 00 0233467888888 899999999999999988 6 9999999999999885
Q ss_pred H
Q 004977 713 K 713 (721)
Q Consensus 713 ~ 713 (721)
.
T Consensus 558 ~ 558 (570)
T PRK04319 558 L 558 (570)
T ss_pred h
Confidence 3
No 29
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.6e-68 Score=614.48 Aligned_cols=530 Identities=18% Similarity=0.202 Sum_probs=405.4
Q ss_pred CCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEE
Q 004977 82 STMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAIL 161 (721)
Q Consensus 82 ~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~ 161 (721)
+..+++|+++++.+|+++|+++.. .. .+..+.+||+||.++++++|++|+++|+++||+|+++
T Consensus 53 n~~~~~l~~~~~~~p~~~A~~~~~-----------~~------~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~ 115 (629)
T PRK10524 53 NLCHNAVDRHLAKRPEQLALIAVS-----------TE------TDEERTYTFRQLHDEVNRMAAMLRSLGVQRGDRVLIY 115 (629)
T ss_pred eHHHHHHHHhhccCCCCeEEEEEc-----------CC------CCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEE
Confidence 346888989999999999998741 11 1223579999999999999999999999999999999
Q ss_pred ccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccc---------hhHHHhhhhcC-CCccEEEE
Q 004977 162 AETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQ---------LKKLSAVSSSL-KTIKNVIY 231 (721)
Q Consensus 162 ~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~---------~~~~~~~~~~~-~~~~~ii~ 231 (721)
++|++++++++|||+++|++++|+++.++.+++.++|++++++++|+++.. .+.+.++.... +....++.
T Consensus 116 ~~n~~e~~~~~lA~~~~Gav~v~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~ 195 (629)
T PRK10524 116 MPMIAEAAFAMLACARIGAIHSVVFGGFASHSLAARIDDAKPVLIVSADAGSRGGKVVPYKPLLDEAIALAQHKPRHVLL 195 (629)
T ss_pred CCCCHHHHHHHHHHHHhCcEEEeeCCCCCHHHHHHHHHhcCCcEEEEccCcccCCcccccHHHHHHHHHhcCCCCCEEEE
Confidence 999999999999999999999999999999999999999999999997642 23333333222 33455665
Q ss_pred ecCCCCCccCCccCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHHHHH-HHhh
Q 004977 232 FENDGSEKDSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAA-IKTL 310 (721)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~-~~~~ 310 (721)
++...... . . .......++++.........+.....++++++|+|||||||.||||+++|++++..... ....
T Consensus 196 ~~~~~~~~----~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~il~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~ 269 (629)
T PRK10524 196 VDRGLAPM----A-R-VAGRDVDYATLRAQHLGARVPVEWLESNEPSYILYTSGTTGKPKGVQRDTGGYAVALATSMDTI 269 (629)
T ss_pred EeCCCCCc----C-c-ccCCcccHHHHHhcCCCCCCCceeeCCCCceEEEeecCCCCCCceEEECCcHHHHHHHHHHHHh
Confidence 54321100 0 0 00112345555443222112222346789999999999999999999999998655444 3344
Q ss_pred CCCCCCCcEEEeccChHHHHHHHH-HHHHHHhcceEeeCccccccccchhhccCccCcceeecceEEeechHHHHHHHHH
Q 004977 311 IPNPGRSDVYLAYLPLAHVLELAA-ESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREG 389 (721)
Q Consensus 311 ~~~~~~~d~~l~~~pl~h~~g~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~ 389 (721)
+ ++.++|++++..|++|..+... ++.+|+.|+++++.+....... ...++..++++++|+++++|++++.+.+.
T Consensus 270 ~-~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~g~~~~~~----~~~~~~~i~~~~vt~~~~~P~~~~~l~~~ 344 (629)
T PRK10524 270 F-GGKAGETFFCASDIGWVVGHSYIVYAPLLAGMATIMYEGLPTRPD----AGIWWRIVEKYKVNRMFSAPTAIRVLKKQ 344 (629)
T ss_pred c-CCCCCCEEEEcCCCCeeccchHHHHHHHhCCCEEEEECCCCCCCC----hHHHHHHHHHcCceEEEeCHHHHHHHHhc
Confidence 5 8889999999999999888644 6778999999988432211111 12334448999999999999999887652
Q ss_pred HHHHHHhhcchhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHHHHHHHhh
Q 004977 390 VVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICM 469 (721)
Q Consensus 390 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~~~~~~ 469 (721)
.... .+....++||.+++||+++++++.+++.+.+
T Consensus 345 ~~~~---------------------------------------------~~~~~l~~lr~i~~~Ge~l~~~~~~~~~~~~ 379 (629)
T PRK10524 345 DPAL---------------------------------------------LRKHDLSSLRALFLAGEPLDEPTASWISEAL 379 (629)
T ss_pred Cccc---------------------------------------------ccccChhheeEEEEeCCCCCHHHHHHHHHhc
Confidence 1100 0011125899999999999999999999989
Q ss_pred CCccccccccccccccccccCC----CCCCCCccCCCcCcceEEEEecCCCCcccCCCCCCcceEEEccc---ccccccc
Q 004977 470 GAPIGQAYGLTETCAGSTFSEW----DDPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGF---NVTAGYF 542 (721)
Q Consensus 470 g~~l~~~YG~TE~~~~~~~~~~----~~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~---~v~~gY~ 542 (721)
++++++.||+||++..+..... ...+.+++|+|+||++++|+|+++|..+ ++|+.|||+|+|| +++.|||
T Consensus 380 ~~~v~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~G~p~~g~~~~i~d~~~g~~~---~~g~~Gel~i~gp~~~~~~~~~~ 456 (629)
T PRK10524 380 GVPVIDNYWQTETGWPILAIARGVEDRPTRLGSPGVPMYGYNVKLLNEVTGEPC---GPNEKGVLVIEGPLPPGCMQTVW 456 (629)
T ss_pred CCCeEeccccccccchhhcCCCCcccCcCCCCCcccCcCCceEEEEeCCCCCCC---CCCCcEEEEEcCCCChhhcCCcc
Confidence 9999999999999843322221 1234589999999999999995467654 4889999999998 5789999
Q ss_pred CCCcccccccccCCCCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcccceEEEEecCCC--
Q 004977 543 NNPGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYVDNIMIHADPFH-- 620 (721)
Q Consensus 543 ~~~~~t~~~f~~~~~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~-- 620 (721)
++++.+.+.+.... +.+||+|||+|++|+||+++|+||.||+||++ |++|+|.|||++|.+||+|.+|+|++.+++
T Consensus 457 ~~~~~~~~~~~~~~-~~~~~~TGDl~~~d~dG~l~i~GR~dd~i~~~-G~ri~p~eIE~~l~~~p~V~e~~vvg~~d~~~ 534 (629)
T PRK10524 457 GDDDRFVKTYWSLF-GRQVYSTFDWGIRDADGYYFILGRTDDVINVA-GHRLGTREIEESISSHPAVAEVAVVGVKDALK 534 (629)
T ss_pred CChHHHHHhhhccC-CCcEEEcCCcEEEcCCCcEEEEEEecCeEEeC-CEEeCHHHHHHHHHhCCCcceEEEEccccCCC
Confidence 99988776553211 22899999999999999999999999999985 999999999999999999999999999876
Q ss_pred -ceEEEEEEcChHHHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCCCCCCCCccCc
Q 004977 621 -NYCVALVVPSHKALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEPWTPEAGLVTA 699 (721)
Q Consensus 621 -~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~~~p~~~~~t~ 699 (721)
+.++++|++.++.. . .+.+..+.+.++|+++++ ++|+.|++|+.|++++++ | +|+
T Consensus 535 g~~~~~~vv~~~~~~--------~---------~~~~~~~~~~~~i~~~~~-~~l~~~~~P~~i~~v~~l--P----~T~ 590 (629)
T PRK10524 535 GQVAVAFVVPKDSDS--------L---------ADREARLALEKEIMALVD-SQLGAVARPARVWFVSAL--P----KTR 590 (629)
T ss_pred CeEEEEEEEECCCCc--------c---------ccccchHHHHHHHHHHHH-hhcCCCcCCCEEEEcCCC--C----CCC
Confidence 36899999875320 0 011112345578888998 899999999999999987 6 999
Q ss_pred ccccChHHHHHHHH
Q 004977 700 ALKIKREQLKAKFK 713 (721)
Q Consensus 700 ~gKi~R~~l~~~~~ 713 (721)
+||++|+.|++.+.
T Consensus 591 sGKi~R~~L~~~~~ 604 (629)
T PRK10524 591 SGKLLRRAIQAIAE 604 (629)
T ss_pred CcchHHHHHHHHHc
Confidence 99999999998764
No 30
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=100.00 E-value=3.9e-68 Score=601.71 Aligned_cols=501 Identities=22% Similarity=0.314 Sum_probs=408.5
Q ss_pred CCCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEE
Q 004977 81 ASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAI 160 (721)
Q Consensus 81 ~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i 160 (721)
..|+.++|++.++.+|+++|+++.. ++ .+.++.+||+||.++++++|++|.+.|+++||+|++
T Consensus 23 ~~~l~~~l~~~a~~~p~~~A~~~~~----------~~-------~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~Val 85 (547)
T PRK13295 23 DRTINDDLDACVASCPDKTAVTAVR----------LG-------TGAPRRFTYRELAALVDRVAVGLARLGVGRGDVVSC 85 (547)
T ss_pred CCCHHHHHHHHHHHCCCceEEEecC----------CC-------ccccceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEE
Confidence 3689999999999999999998631 11 133457999999999999999999999999999999
Q ss_pred EccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccc-----hhHHHhhhhcCCCccEEEEecCC
Q 004977 161 LAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQ-----LKKLSAVSSSLKTIKNVIYFEND 235 (721)
Q Consensus 161 ~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~-----~~~~~~~~~~~~~~~~ii~~~~~ 235 (721)
+++|+++|++++|||+++|++++|++|.++.+++.++++.++++++|+++.. .+.+..+...++.++.++.++..
T Consensus 86 ~~~n~~e~~~~~la~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (547)
T PRK13295 86 QLPNWWEFTVLYLACSRIGAVLNPLMPIFRERELSFMLKHAESKVLVVPKTFRGFDHAAMARRLRPELPALRHVVVVGGD 165 (547)
T ss_pred ECCCChHHHHHHHHHHhcCcEEeccccccCHHHHHHHHHhcCceEEEEeccccCcchHHHHHHHhhhCCCcceEEEecCC
Confidence 9999999999999999999999999999999999999999999999998764 23344444556667777765432
Q ss_pred CCCccCCccCCCCCceEeeHHHHHhcCC-------CCCCCCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHHHHHHH
Q 004977 236 GSEKDSGVSGGISNWTVSSFSEVEKLGK-------RSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIK 308 (721)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~ 308 (721)
.. .++.++..... ..........++++++|+|||||||.||||++||++++..+....
T Consensus 166 ~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~ 230 (547)
T PRK13295 166 GA---------------DSFEALLITPAWEQEPDAPAILARLRPGPDDVTQLIYTSGTTGEPKGVMHTANTLMANIVPYA 230 (547)
T ss_pred Cc---------------cCHHHHhhCCccccccccccccccCCCCCcceeEEEeCCCCCCCCCEEEeccHHHHHHHHHHH
Confidence 11 12333322110 001112334678999999999999999999999999999888877
Q ss_pred hhCCCCCCCcEEEeccChHHHHHHHH-HHHHHHhcceEeeCc---cccccccchhhccCccCcceeecceEEeechHHHH
Q 004977 309 TLIPNPGRSDVYLAYLPLAHVLELAA-ESIMLCAGCAIGYGS---TLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFD 384 (721)
Q Consensus 309 ~~~~~~~~~d~~l~~~pl~h~~g~~~-~~~~l~~G~~~~~~~---~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~ 384 (721)
..+ .+.++|++++.+|++|.+++.. ++.++..|+++++.+ +..+.+ .++++++|++.++|+++.
T Consensus 231 ~~~-~~~~~~~~l~~~p~~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~-----------~l~~~~vt~~~~~p~~~~ 298 (547)
T PRK13295 231 ERL-GLGADDVILMASPMAHQTGFMYGLMMPVMLGATAVLQDIWDPARAAE-----------LIRTEGVTFTMASTPFLT 298 (547)
T ss_pred HHh-CCCCCCeEEEecCchhhhhHHHHHHHHHHcCCeEEeCCCCCHHHHHH-----------HHHHcCCcEEEecHHHHH
Confidence 777 8899999999999999998765 677899999998843 333333 389999999999999999
Q ss_pred HHHHHHHHHHHhhcchhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHHHH
Q 004977 385 RVREGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRF 464 (721)
Q Consensus 385 ~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~ 464 (721)
.+....... ....+++|.+++||+++++++.++
T Consensus 299 ~l~~~~~~~-----------------------------------------------~~~~~~l~~~~~~G~~l~~~~~~~ 331 (547)
T PRK13295 299 DLTRAVKES-----------------------------------------------GRPVSSLRTFLCAGAPIPGALVER 331 (547)
T ss_pred HHHhccccc-----------------------------------------------CCCcccceEEEEecCCCCHHHHHH
Confidence 886531100 011258999999999999999999
Q ss_pred HHHhhCCccccccccccccccccccCCC--CCCCCccCCCcCcceEEEEecCCCCcccCCCCCCcceEEEcccccccccc
Q 004977 465 INICMGAPIGQAYGLTETCAGSTFSEWD--DPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYF 542 (721)
Q Consensus 465 ~~~~~g~~l~~~YG~TE~~~~~~~~~~~--~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~ 542 (721)
+.+.+++++++.||+||++.+++..... .....++|+|+|+++++|+| +++..+ +.|+.|||+|+|++++.||+
T Consensus 332 ~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d-~~~~~~---~~g~~Gel~v~g~~~~~gY~ 407 (547)
T PRK13295 332 ARAALGAKIVSAWGMTENGAVTLTKLDDPDERASTTDGCPLPGVEVRVVD-ADGAPL---PAGQIGRLQVRGCSNFGGYL 407 (547)
T ss_pred HHHHhCCCeEEeccCCCCCCeeeccCCCcchhccCccccccCCcEEEEEC-CCCCCC---CCCCCCeEEEEcCccccccc
Confidence 9888899999999999998765544322 12346899999999999999 556543 47899999999999999999
Q ss_pred CCCcccccccccCCCCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcccceEEEEecCCC--
Q 004977 543 NNPGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYVDNIMIHADPFH-- 620 (721)
Q Consensus 543 ~~~~~t~~~f~~~~~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~-- 620 (721)
++|+.|++. .+ |||+|||+|+++++|+++|.||.||+||+ +|++|+|.+||++|.+|++|.+++|++.++.
T Consensus 408 ~~~~~t~~~----~~--g~~~TGD~~~~~~~g~l~~~gR~~~~i~~-~G~~v~p~~IE~~l~~~~~v~~~~v~~~~~~~~ 480 (547)
T PRK13295 408 KRPQLNGTD----AD--GWFDTGDLARIDADGYIRISGRSKDVIIR-GGENIPVVEIEALLYRHPAIAQVAIVAYPDERL 480 (547)
T ss_pred CCccccccC----CC--CCeecceEEEEcCCceEEEEeccCCeEEE-CCEEECHHHHHHHHHhCCCeeeEEEEeeecCCC
Confidence 999998765 34 89999999999999999999999999997 6999999999999999999999999998765
Q ss_pred -ceEEEEEEcChHHHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCCCCCCCCccCc
Q 004977 621 -NYCVALVVPSHKALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEPWTPEAGLVTA 699 (721)
Q Consensus 621 -~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~~~p~~~~~t~ 699 (721)
+.++++|++.++. ..+ .+++.+++++.+|+.|++|+++++++++ | +|+
T Consensus 481 g~~~~~~v~~~~~~----------~~~---------------~~~l~~~~~~~~l~~~~~P~~i~~v~~l--P----~t~ 529 (547)
T PRK13295 481 GERACAFVVPRPGQ----------SLD---------------FEEMVEFLKAQKVAKQYIPERLVVRDAL--P----RTP 529 (547)
T ss_pred CcEEEEEEEeCCCC----------CCC---------------HHHHHHHHHhccCccccCCcEEEEeccC--C----CCC
Confidence 3689999886531 000 2567777774589999999999999988 6 999
Q ss_pred ccccChHHHHHHHHH
Q 004977 700 ALKIKREQLKAKFKD 714 (721)
Q Consensus 700 ~gKi~R~~l~~~~~~ 714 (721)
+||++|++|++++.+
T Consensus 530 sgK~~r~~L~~~~~~ 544 (547)
T PRK13295 530 SGKIQKFRLREMLRG 544 (547)
T ss_pred CccccHHHHHHHHhc
Confidence 999999999988764
No 31
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=2.2e-70 Score=725.61 Aligned_cols=520 Identities=20% Similarity=0.271 Sum_probs=425.9
Q ss_pred cccccccccCCCCCCCCCCccccccCCCCccccccCCCCCCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCcccee
Q 004977 43 ARKKKVKQRGVPVEVGGEPGYAIRNAQIPELVEVPWKGASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEK 122 (721)
Q Consensus 43 p~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~ 122 (721)
|... +.+++++...+++.+...++ ....+.+...|++++|+++++++||++|+++ ++.
T Consensus 3062 p~~~---~~~l~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~a~~~p~~~Av~~------------~~~---- 3119 (3956)
T PRK12467 3062 PAAR---LGELPTLAAHERRQVLHAWN---ATAAAYPSERLVHQLIEAQVARTPEAPALVF------------GDQ---- 3119 (3956)
T ss_pred cCCc---hhhccCCCHHHHHHHHHhhc---cCCCCCCccccHHHHHHHHHHhCCCcceEee------------CCc----
Confidence 7776 88899998888887654444 1233344557999999999999999999986 332
Q ss_pred ccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcC
Q 004977 123 LHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQ 202 (721)
Q Consensus 123 ~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~ 202 (721)
.+||+||+++++++|+.|.++|+++|++|+|+++|++++++++|||+++|+++||++|.++.+++.+++++++
T Consensus 3120 -------~lTY~eL~~~a~~lA~~L~~~gv~~g~~V~l~~~~s~~~vv~~lavl~aGa~~vpld~~~p~~rl~~il~~~~ 3192 (3956)
T PRK12467 3120 -------QLSYAELNRRANRLAHRLIAIGVGPDVLVGVAVERSVEMIVALLAVLKAGGAYVPLDPEYPRERLAYMIEDSG 3192 (3956)
T ss_pred -------ccCHHHHHHHHHHHHHHHHHcCCCCCCeEEEEeCCCHHHHHHHHHHHhhCcEeecCCCCChHHHHHHHHhCCC
Confidence 5999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEECccchhHHHhhhhcCCCccEEEEecCCCCCccCCccCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEe
Q 004977 203 VTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEKDSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMY 282 (721)
Q Consensus 203 ~~~vi~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~ 282 (721)
++++|++....+.+... ... .++.++.. .........+.....++++|||+|
T Consensus 3193 ~~~vlt~~~~~~~~~~~----~~~-~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~a~ii~ 3244 (3956)
T PRK12467 3193 VKLLLTQAHLLEQLPAP----AGD-TALTLDRL-----------------------DLNGYSENNPSTRVMGENLAYVIY 3244 (3956)
T ss_pred CcEEEechhhhhhcccc----cCC-ceeeecch-----------------------hhcccCCCCCcccCCCCceEEEEE
Confidence 99999987664433211 111 11221110 000111111223457899999999
Q ss_pred ccCCCCCcchheeccHHHHHHHHHHHhhCCCCCCCcEEEeccChHHHHHHHHHHHHHHhcceEeeCccccccccchhhcc
Q 004977 283 TSGSTGLPKGVMITHGNIVATAAAIKTLIPNPGRSDVYLAYLPLAHVLELAAESIMLCAGCAIGYGSTLTMTDTSSKIKK 362 (721)
Q Consensus 283 TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~ 362 (721)
||||||.||||+++|+++++.+.+....+ +++++|++++++|++|+.++..++.+|+.|+++++.+ ....+. .
T Consensus 3245 TSGSTG~PKgV~~~h~~l~~~~~~~~~~~-~~~~~d~~l~~~~~~fd~~~~~~~~~L~~G~~l~i~~-~~~~~~-----~ 3317 (3956)
T PRK12467 3245 TSGSTGKPKGVGVRHGALANHLCWIAEAY-ELDANDRVLLFMSFSFDGAQERFLWTLICGGCLVVRD-NDLWDP-----E 3317 (3956)
T ss_pred ccCCCCCcceeeehhHHHHHHHHHHHHhc-CCCcCCEEEEecCccHhHHHHHHHHHHhCCCEEEECC-cccCCH-----H
Confidence 99999999999999999999999998888 9999999999999999999988999999999999865 222222 2
Q ss_pred CccCcceeecceEEeechHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHH
Q 004977 363 GTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAV 442 (721)
Q Consensus 363 ~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (721)
.+...+.++++|++.++|++++.+.+.... .
T Consensus 3318 ~l~~~i~~~~vt~~~~~Ps~l~~l~~~~~~-------------------------------------------------~ 3348 (3956)
T PRK12467 3318 ELWQAIHAHRISIACFPPAYLQQFAEDAGG-------------------------------------------------A 3348 (3956)
T ss_pred HHHHHHHHcCCEEEEcCHHHHHHHHhcccc-------------------------------------------------c
Confidence 234449999999999999999988652100 0
Q ss_pred hCCcEEEEEecCCCCCHHHHHHHHHhh-CCccccccccccccccccccCCCC-----CCCCccCCCcCcceEEEEecCCC
Q 004977 443 LGGRIRFMICGGAPLSADSQRFINICM-GAPIGQAYGLTETCAGSTFSEWDD-----PSVGRVGPPVPCCYIKLVSWDEG 516 (721)
Q Consensus 443 ~~~~lr~v~~gG~~l~~~~~~~~~~~~-g~~l~~~YG~TE~~~~~~~~~~~~-----~~~~~vG~p~p~~~v~i~d~~~~ 516 (721)
..++||.+++|||++++++.+.+.+.+ ++.++|+||+||+++.++...... ....++|+|++|++++|+| +++
T Consensus 3349 ~~~~lr~~~~gGe~~~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d-~~~ 3427 (3956)
T PRK12467 3349 DCASLDIYVFGGEAVPPAAFEQVKRKLKPRGLTNGYGPTEAVVTVTLWKCGGDAVCEAPYAPIGRPVAGRSIYVLD-GQL 3427 (3956)
T ss_pred CCCCceEEEEecCCCCHHHHHHHHHhCCCCEEEeCcccchhEeeeEEEecccccccCCCCCCCccccCCCEEEEEC-CCC
Confidence 124899999999999999988887765 678999999999998776543321 1236899999999999998 666
Q ss_pred CcccCCCCCCcceEEEccccccccccCCCcccccccccCC---CCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeee
Q 004977 517 GYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVDE---RGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEY 593 (721)
Q Consensus 517 ~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~~---~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~ 593 (721)
+. +++|+.|||+|+|+++++||+|+|+.|+++|..++ +|.+||+|||+|++++||+|+|+||+||+||++ |+|
T Consensus 3428 ~~---vp~G~~GEL~i~G~~v~~GY~~~~~~T~~~F~~~p~~~~g~r~yrTGDl~~~~~dG~l~~~GR~d~~iki~-G~r 3503 (3956)
T PRK12467 3428 NP---VPVGVAGELYIGGVGLARGYHQRPSLTAERFVADPFSGSGGRLYRTGDLARYRADGVIEYLGRIDHQVKIR-GFR 3503 (3956)
T ss_pred CC---CCCCCCceEEEcchhhhhhccCCcccchhhccCCCCCCCCceeeccchhheecCCCcEEEeccccceEeec-eEe
Confidence 55 45899999999999999999999999999997432 255799999999999999999999999999985 999
Q ss_pred eechHHHHHHhcCcccceEEEEecCC--CceEEEEEEcChHHHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHH
Q 004977 594 ISLGKVEAALISSDYVDNIMIHADPF--HNYCVALVVPSHKALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKA 671 (721)
Q Consensus 594 v~p~eIE~~l~~~p~V~~~~V~g~~~--~~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 671 (721)
|+|.|||++|.+||+|.+|+|++..+ .+.++|+|++.... ....++|+++++
T Consensus 3504 Ie~~EIE~~l~~~p~V~~a~v~~~~~~~~~~lva~v~~~~~~-------------------------~~~~~~l~~~l~- 3557 (3956)
T PRK12467 3504 IELGEIEARLLQHPSVREAVVLARDGAGGKQLVAYVVPADPQ-------------------------GDWRETLRDHLA- 3557 (3956)
T ss_pred ecHHHHHHHHhhCcccceEEEEEecCCCCcEEEEEEeCCCCC-------------------------cccHHHHHHHHh-
Confidence 99999999999999999999998653 35799999987531 011367888888
Q ss_pred CCCCCcccccEEEeeCCCCCCCCCccCcccccChHHHHHHH
Q 004977 672 AKLDKFEIPAKIKLMPEPWTPEAGLVTAALKIKREQLKAKF 712 (721)
Q Consensus 672 ~~L~~~~~P~~i~~~~~~~~p~~~~~t~~gKi~R~~l~~~~ 712 (721)
.+||.||+|+.|++++++ | +|++|||||++|.+.+
T Consensus 3558 ~~Lp~y~vP~~~~~l~~l--P----~t~~GKidR~~L~~~~ 3592 (3956)
T PRK12467 3558 ASLPDYMVPAQLLVLAAM--P----LGPNGKVDRKALPDPD 3592 (3956)
T ss_pred ccCChhhCCCeeeeeccC--C----CCCCCccchhhcCCCC
Confidence 999999999999999997 6 9999999999998654
No 32
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3.2e-68 Score=604.16 Aligned_cols=515 Identities=23% Similarity=0.350 Sum_probs=404.2
Q ss_pred CCCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHh-CCCCCCCEEE
Q 004977 81 ASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVN-FGHNVDTRAA 159 (721)
Q Consensus 81 ~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~-~Gv~~gd~V~ 159 (721)
..|+.++|++.++++|+++|++. +++ .+||+||.++++++|++|.+ .|+++||+|+
T Consensus 23 ~~~~~~~l~~~a~~~p~~~al~~------------~~~-----------~~Ty~el~~~~~~la~~L~~~~gi~~gd~Va 79 (562)
T PRK05677 23 YPNIQAVLKQSCQRFADKPAFSN------------LGK-----------TLTYGELYKLSGAFAAWLQQHTDLKPGDRIA 79 (562)
T ss_pred cCcHHHHHHHHHHhCCCCeeEEE------------CCc-----------eeeHHHHHHHHHHHHHHHHHhcCCCCCCEEE
Confidence 35899999999999999999985 333 69999999999999999997 5999999999
Q ss_pred EEccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccchhHHHhhhhcCCCccEEEEecCCCCCc
Q 004977 160 ILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEK 239 (721)
Q Consensus 160 i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~ 239 (721)
|+++|+++|++++|||+++|++++|++|.++.+++.+++++++++++|++......+.+..... .++.++..+......
T Consensus 80 i~~~n~~~~~~~~la~~~~Ga~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 158 (562)
T PRK05677 80 VQLPNVLQYPVAVFGAMRAGLIVVNTNPLYTAREMEHQFNDSGAKALVCLANMAHLAEKVLPKT-GVKHVIVTEVADMLP 158 (562)
T ss_pred EECCCCHHHHHHHHHHHHcCeEEeecCCCCCHHHHHHHHhccCceEEEEecchhhhHHHhhhcc-CcceeEEeccccccc
Confidence 9999999999999999999999999999999999999999999999999887666555443322 344444432111000
Q ss_pred ---c-------CCccC---CCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHHHHH
Q 004977 240 ---D-------SGVSG---GISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAA 306 (721)
Q Consensus 240 ---~-------~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~ 306 (721)
. ..+.. .........+.+................++|+++|+|||||||.||||+++|+++...+..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~ 238 (562)
T PRK05677 159 PLKRLLINAVVKHVKKMVPAYHLPQAVKFNDALAKGAGQPVTEANPQADDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQ 238 (562)
T ss_pred chhhhhcccchhhccccccccCCcccccHHHHHhcCCCCCCCCCCCCccCEEEEEeCCCCCCCCcEEEEehhHHHHHHHH
Confidence 0 00000 0000112334554443332222233456799999999999999999999999999887766
Q ss_pred HHhhC-CCCC-CCcEEEeccChHHHHHHHH-HHHHHHhcceEeeC-ccccccccchhhccCccCcceeecceEEeechHH
Q 004977 307 IKTLI-PNPG-RSDVYLAYLPLAHVLELAA-ESIMLCAGCAIGYG-STLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAI 382 (721)
Q Consensus 307 ~~~~~-~~~~-~~d~~l~~~pl~h~~g~~~-~~~~l~~G~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~ 382 (721)
....+ ..+. ..+++++.+|++|.+++.. .+.++..|++.++. ++... ..+...++++++|+++++|++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~pl~h~~~~~~~~~~~~~~g~~~~~~~~~~~~--------~~~~~~i~~~~~t~~~~~p~~ 310 (562)
T PRK05677 239 CRALMGSNLNEGCEILIAPLPLYHIYAFTFHCMAMMLIGNHNILISNPRDL--------PAMVKELGKWKFSGFVGLNTL 310 (562)
T ss_pred HHHHhccCCCCCccEEEEcCcHHHHHHHHHHHHHHHHcCCeEEEecCcccH--------HHHHHHHHHcCceEEecHHHH
Confidence 55443 1233 3468899999999999865 55667778876653 22211 112233899999999999999
Q ss_pred HHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHH
Q 004977 383 FDRVREGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQ 462 (721)
Q Consensus 383 ~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~ 462 (721)
+..+.+.... +....+++|.+++||+++++++.
T Consensus 311 ~~~l~~~~~~-----------------------------------------------~~~~~~~lr~v~~gG~~~~~~~~ 343 (562)
T PRK05677 311 FVALCNNEAF-----------------------------------------------RKLDFSALKLTLSGGMALQLATA 343 (562)
T ss_pred HHHHHhCccc-----------------------------------------------ccCChhhceEEEEcCccCCHHHH
Confidence 9887652100 00011489999999999999999
Q ss_pred HHHHHhhCCccccccccccccccccccCCCCCCCCccCCCcCcceEEEEecCCCCcccCCCCCCcceEEEcccccccccc
Q 004977 463 RFINICMGAPIGQAYGLTETCAGSTFSEWDDPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYF 542 (721)
Q Consensus 463 ~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~ 542 (721)
+.+.+.+|+++++.||+||++.+++.........+++|+|+|+++++|+| +++..+ +.|+.|||+|+|+.++.||+
T Consensus 344 ~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~vG~~~~~~~v~i~d-~~~~~~---~~g~~Gel~v~g~~~~~gY~ 419 (562)
T PRK05677 344 ERWKEVTGCAICEGYGMTETSPVVSVNPSQAIQVGTIGIPVPSTLCKVID-DDGNEL---PLGEVGELCVKGPQVMKGYW 419 (562)
T ss_pred HHHHHHcCCCeeccCCccccCcceeecCccCCCCCccCccCCCCEEEEEC-CCCCCC---CCCCCeEEEEecCccchhhc
Confidence 99999889999999999999877765554445568999999999999999 556554 58899999999999999999
Q ss_pred CCCcccccccccCCCCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcccceEEEEecCCCc-
Q 004977 543 NNPGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYVDNIMIHADPFHN- 621 (721)
Q Consensus 543 ~~~~~t~~~f~~~~~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~~- 621 (721)
++|+.|++.|. .+ |||+|||+|++|+||+++|.||+||+||++ |++|+|.+||++|.+||+|.+++|++.+++.
T Consensus 420 ~~~~~t~~~~~--~~--g~~~TGDlg~~~~~G~l~i~GR~~d~i~~~-G~~i~p~eiE~~l~~~~~v~~~~v~g~~~~~~ 494 (562)
T PRK05677 420 QRPEATDEILD--SD--GWLKTGDIALIQEDGYMRIVDRKKDMILVS-GFNVYPNELEDVLAALPGVLQCAAIGVPDEKS 494 (562)
T ss_pred CCchhhhhccC--CC--CcccccceEEECCCCcEEEEecCcCeEEeC-CEEECHHHHHHHHHhCCCccEEEEEeccCccC
Confidence 99999999985 56 899999999999999999999999999985 9999999999999999999999999988653
Q ss_pred --eEEEEEEcChHHHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCCCCCCCCccCc
Q 004977 622 --YCVALVVPSHKALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEPWTPEAGLVTA 699 (721)
Q Consensus 622 --~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~~~p~~~~~t~ 699 (721)
.++++|++.++. ..+ .++++++++ .+|++|++|+.|++++++ | +|+
T Consensus 495 g~~~~~~v~~~~~~--------~~~-----------------~~~l~~~~~-~~l~~~~~P~~i~~v~~i--P----~t~ 542 (562)
T PRK05677 495 GEAIKVFVVVKPGE--------TLT-----------------KEQVMEHMR-ANLTGYKVPKAVEFRDEL--P----TTN 542 (562)
T ss_pred CceEEEEEEeCCCC--------CCC-----------------HHHHHHHHH-HhhhhccCCcEEEEeccC--C----CCC
Confidence 577888765421 000 257788888 899999999999999998 6 999
Q ss_pred ccccChHHHHHHHHHH
Q 004977 700 ALKIKREQLKAKFKDD 715 (721)
Q Consensus 700 ~gKi~R~~l~~~~~~~ 715 (721)
+||++|++|++.+.++
T Consensus 543 sGKi~r~~L~~~~~~~ 558 (562)
T PRK05677 543 VGKILRRELRDEELKK 558 (562)
T ss_pred cccccHHHHHHHHHHh
Confidence 9999999999877554
No 33
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=100.00 E-value=2.6e-68 Score=612.05 Aligned_cols=510 Identities=15% Similarity=0.131 Sum_probs=390.7
Q ss_pred hCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEccCcHhHHHHHH
Q 004977 94 SHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVEWFIAFQ 173 (721)
Q Consensus 94 ~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~l 173 (721)
++++++|+++.. . .+..+.+||+||.++++++|++|+++|+++||+|+|+++|++|+++++|
T Consensus 96 ~~~~~~a~~~~~-----------~-------~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~~n~~e~~~~~l 157 (652)
T TIGR01217 96 AAGTEPALLYVD-----------E-------THEPAPVTWAELRRQVASLAAALRALGVRPGDRVSGYLPNIPQAVVAML 157 (652)
T ss_pred cCCCCeEEEEEC-----------C-------CCCeeEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHH
Confidence 468999998742 1 1233579999999999999999999999999999999999999999999
Q ss_pred HHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccc---------hhHHHhhhhcCCCccEEEEecCCCCCccCCcc
Q 004977 174 GCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQ---------LKKLSAVSSSLKTIKNVIYFENDGSEKDSGVS 244 (721)
Q Consensus 174 A~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~---------~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~ 244 (721)
||+++|++++|+++.++.+++.++|++++++++|+++.. .+.+.++...++.++.++.++......... .
T Consensus 158 A~~~~Gav~vp~~~~~~~~~l~~~l~~~~~k~li~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~ 236 (652)
T TIGR01217 158 ATASVGAIWSSCSPDFGARGVLDRFQQIEPKLLFTVDGYRYNGKEHDRRDKVAEVRKELPTLRAVVHIPYLGPRETEA-P 236 (652)
T ss_pred HHHHhCeEEEecCCCCCHHHHHHHHHhcCCcEEEEccccccCCcccchHHHHHHHHhcCCCccEEEEEeCCCCccccc-c
Confidence 999999999999999999999999999999999998753 345555556677777777765322110000 0
Q ss_pred CCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEeccCCCCCcchheeccHHHHH-HHHHHHhhCCCCCCCcEEEec
Q 004977 245 GGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVA-TAAAIKTLIPNPGRSDVYLAY 323 (721)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~-~~~~~~~~~~~~~~~d~~l~~ 323 (721)
. ......|+++...............++|+++|+|||||||.||||+++|++++. ........+ ++.++|+++++
T Consensus 237 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~-~~~~~d~~~~~ 312 (652)
T TIGR01217 237 K---IDGALDLEDFTAAAQAAELVFEQLPFDHPLWILFSSGTTGLPKCIVHSAGGTLVQHLKEHGLHC-DLGPGDRLFYY 312 (652)
T ss_pred c---ccCcccHHHHHhcccCCCCCceecCCCCCEEEEEcCCCCCCCCeEEecccHHHHHHHHHHHhcc-CCCCCcEEEEe
Confidence 0 011245677654322212222344668999999999999999999999999764 344444455 88999999999
Q ss_pred cChHHHHHHHHHHHHHHhcceEeeCccccccccchhhccCccCcceeecceEEeechHHHHHHHHHHHHHHHhhcchhhH
Q 004977 324 LPLAHVLELAAESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKGGLTKN 403 (721)
Q Consensus 324 ~pl~h~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~ 403 (721)
+|++|+.. ..++.+|+.|+++++.+....... +..++..++++++|++..+|++++.+......
T Consensus 313 ~~~~~~~~-~~~~~~l~~G~t~vl~~g~~~~~~----~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~~----------- 376 (652)
T TIGR01217 313 TTTGWMMW-NWLVSGLATGATLVLYDGSPGFPA----TNVLWDIAERTGATLFGTSAKYVMACRKAGVH----------- 376 (652)
T ss_pred CCcchhhh-HHHHHHHhcCcEEEEECCCCCCCC----chHHHHHHHHhCCeEEecCHHHHHHHHhcCCC-----------
Confidence 99999754 235578999999998542211111 12234449999999998888777665431000
Q ss_pred HHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHHHHHHHhhC--Ccccccccccc
Q 004977 404 LFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMG--APIGQAYGLTE 481 (721)
Q Consensus 404 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~~~~~~g--~~l~~~YG~TE 481 (721)
.......++||.+++||+++++++.+++.+.++ +.+.+.||+||
T Consensus 377 ----------------------------------~~~~~~l~sLr~i~~gGe~l~~~~~~~~~~~~~~~~~~~~~yG~TE 422 (652)
T TIGR01217 377 ----------------------------------PARTHDLSALQCVASTGSPLPPDGFRWVYDEIKADVWLASISGGTD 422 (652)
T ss_pred ----------------------------------ccccCChhheeEEEeecCCCCHHHHHHHHHHhCCCceEEeccCHHH
Confidence 000112258999999999999999999888775 45678999999
Q ss_pred cccccccc-CCCCCCCCccCCCcCcceEEEEecCCCCcccCCCCCCcceEEEccc--cccccccCCCcccc--cccccCC
Q 004977 482 TCAGSTFS-EWDDPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGF--NVTAGYFNNPGKTS--EVYKVDE 556 (721)
Q Consensus 482 ~~~~~~~~-~~~~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~--~v~~gY~~~~~~t~--~~f~~~~ 556 (721)
++...... .......+++|.|.+|++++|+| ++|..+ +|+.|||+++|| +++.|||++++.|. +.+....
T Consensus 423 ~~~~~~~~~~~~~~~~g~~g~p~~g~~v~ivd-~~g~~~----~g~~GEl~v~gp~p~~~~gy~~~~~~t~~~~~~~~~~ 497 (652)
T TIGR01217 423 ICSCFAGANPTLPVHIGEIQAPGLGTAVQSWD-PEGKPV----TGEVGELVCTNPMPSMPIRFWNDPDGSKYRDAYFDTY 497 (652)
T ss_pred HhccccCCCCCCCCcCCccCCCcCCCceEEEC-CCCCCC----CCCccEEEEecCCCccccceeCCCccchhHHhhhcCC
Confidence 75433322 22223458899999999999999 566543 478999999996 68999999998764 2222112
Q ss_pred CCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcccceEEEEecCCC---ceEEEEEEcChHH
Q 004977 557 RGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYVDNIMIHADPFH---NYCVALVVPSHKA 633 (721)
Q Consensus 557 ~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~~a~vv~~~~~ 633 (721)
+ |||+|||+|++|+||+|+|+||.||+||+ +|+||+|.|||++|.+||.|.+|+|+|.+++ +.++|||++.++.
T Consensus 498 ~--g~~~tGDlg~~d~dG~l~i~GR~dd~I~~-~G~ri~p~EIE~~l~~~p~V~eaavvg~~~~~~ge~~~afVv~~~~~ 574 (652)
T TIGR01217 498 P--GVWRHGDWITLTPRGGIVIHGRSDSTLNP-QGVRMGSAEIYNAVERLDEVRESLCIGQEQPDGGYRVVLFVHLAPGA 574 (652)
T ss_pred C--CEEEcCCcEEECCCCcEEEEecccCeEec-CCEEcCHHHHHHHHHhCCCcceEEEEeeecCCCCEEEEEEEEECCCC
Confidence 4 79999999999999999999999999996 6999999999999999999999999999875 3699999987532
Q ss_pred HHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCCCCCCCCccCcccccChHHHHHHHH
Q 004977 634 LEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEPWTPEAGLVTAALKIKREQLKAKFK 713 (721)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~~~p~~~~~t~~gKi~R~~l~~~~~ 713 (721)
+. .+++.++|+++++ .+|++|++|+.|++++++ | +|++|||+|+.|++.+.
T Consensus 575 ----------~~------------~~~~~~~l~~~~~-~~l~~~~~P~~i~~v~~l--P----~T~sGKi~r~~Lr~~~~ 625 (652)
T TIGR01217 575 ----------TL------------DDALLDRIKRTIR-AGLSPRHVPDEIIEVPGI--P----HTLTGKRVEVAVKRVLQ 625 (652)
T ss_pred ----------CC------------CHHHHHHHHHHHH-hhCCCCcCCCEEEECCCC--C----CCCCccChHHHHHHHHc
Confidence 10 0234578888888 899999999999999998 6 99999999999998874
No 34
>PRK05857 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.2e-68 Score=604.24 Aligned_cols=506 Identities=20% Similarity=0.240 Sum_probs=392.6
Q ss_pred CCCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEE
Q 004977 81 ASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAI 160 (721)
Q Consensus 81 ~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i 160 (721)
+.|+.+.|.++|+++|+++|+... ++. +.+||+||.++++++|+.|.+.|+++||+|+|
T Consensus 13 ~~~~~~~l~~~a~~~p~~~a~~~~-----------~~~----------~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i 71 (540)
T PRK05857 13 PSTVLDRVFEQARQQPEAIALRRC-----------DGT----------SALRYRELVAEVGGLAADLRAQSVSRGSRVLV 71 (540)
T ss_pred CcchHHHHHHHHhhCCCcEEEeec-----------CCC----------ceeeHHHHHHHHHHHHHHHHHhCcCCCCEEEE
Confidence 368999999999999999999753 332 36999999999999999999999999999999
Q ss_pred EccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccchhHHHhhhhcCCCccEEEEecCCCCCcc
Q 004977 161 LAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEKD 240 (721)
Q Consensus 161 ~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~ 240 (721)
+++|++++++++|||+++|++++|+++.++.+++.++++.++++.+|+++........+......+.. +..+......
T Consensus 72 ~~~~~~e~~~~~lA~~~~G~v~v~l~~~~~~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~- 149 (540)
T PRK05857 72 ISDNGPETYLSVLACAKLGAIAVMADGNLPIAAIERFCQITDPAAALVAPGSKMASSAVPEALHSIPV-IAVDIAAVTR- 149 (540)
T ss_pred EcCCCHHHHHHHHHHHHcCeEEEecCccCCHHHHHHHHHhcCCceEEEeccchhccccccccccccce-eEeecccccc-
Confidence 99999999999999999999999999999999999999999999999998654322222221222222 2222111000
Q ss_pred CCccCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHHHHHHHh----hCCCCCC
Q 004977 241 SGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKT----LIPNPGR 316 (721)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~----~~~~~~~ 316 (721)
. ..+.. ............++++++++|||||||.||||++||+++.++...... .+ ....
T Consensus 150 ---------~---~~~~~---~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~-~~~~ 213 (540)
T PRK05857 150 ---------E---SEHSL---DAASLAGNADQGSEDPLAMIFTSGTTGEPKAVLLANRTFFAVPDILQKEGLNWV-TWVV 213 (540)
T ss_pred ---------c---ccccc---cccccccccCCCCCCeEEEEeCCCCCCCCCeEEEechhhhhhhHHhhhcccccc-cccc
Confidence 0 00000 000011123346789999999999999999999999999876554332 12 4567
Q ss_pred CcEEEeccChHHHHHHHHHHHHHHhcceEeeC--ccccccccchhhccCccCcceeecceEEeechHHHHHHHHHHHHHH
Q 004977 317 SDVYLAYLPLAHVLELAAESIMLCAGCAIGYG--STLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKV 394 (721)
Q Consensus 317 ~d~~l~~~pl~h~~g~~~~~~~l~~G~~~~~~--~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~ 394 (721)
+++.++.+|++|.+++...+.+++.|+++++. ++..+ +..++++++|+++++|++++.+.+.....
T Consensus 214 ~~~~~~~~p~~h~~~l~~~~~~l~~G~~~v~~~~~~~~~-----------~~~i~~~~it~~~~~P~~~~~l~~~~~~~- 281 (540)
T PRK05857 214 GETTYSPLPATHIGGLWWILTCLMHGGLCVTGGENTTSL-----------LEILTTNAVATTCLVPTLLSKLVSELKSA- 281 (540)
T ss_pred CceeeecCCccccchHHHHHHHhhcceeEEecCCChhHH-----------HHHHHhcCcceEEeChHHHHHHHhccccC-
Confidence 88999999999999998888889999998763 23333 33499999999999999999887532100
Q ss_pred HhhcchhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHHHHHHHhhCCccc
Q 004977 395 EEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMGAPIG 474 (721)
Q Consensus 395 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~~~~~~g~~l~ 474 (721)
....+++|.+++||++++....+++. .+|++++
T Consensus 282 ----------------------------------------------~~~~~~lr~~~~gG~~~~~~~~~~~~-~~g~~i~ 314 (540)
T PRK05857 282 ----------------------------------------------NATVPSLRLVGYGGSRAIAADVRFIE-ATGVRTA 314 (540)
T ss_pred ----------------------------------------------CCcCccceEEEEcCccCCchhHHHHH-HhCCeee
Confidence 01125899999999999988776554 5799999
Q ss_pred cccccccccccccccCCC-----CCCCCccCCCcCcceEEEEecCCCCccc--CCCCCCcceEEEccccccccccCCCcc
Q 004977 475 QAYGLTETCAGSTFSEWD-----DPSVGRVGPPVPCCYIKLVSWDEGGYKT--SDKPMPRGEIVVGGFNVTAGYFNNPGK 547 (721)
Q Consensus 475 ~~YG~TE~~~~~~~~~~~-----~~~~~~vG~p~p~~~v~i~d~~~~~~~~--~~~~g~~GEl~v~g~~v~~gY~~~~~~ 547 (721)
+.||+||++......... ..+.+++|+|++|++++|+|++.....+ .++.|+.|||+|+|++++.|||++++.
T Consensus 315 ~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~v~i~d~~~~~~~~~~~~~~~~~Gel~v~g~~~~~GY~~~~~~ 394 (540)
T PRK05857 315 QVYGLSETGCTALCLPTDDGSIVKIEAGAVGRPYPGVDVYLAATDGIGPTAPGAGPSASFGTLWIKSPANMLGYWNNPER 394 (540)
T ss_pred cccCCCcCCceeeecccccccccccccCCcCcccCCcEEEEECccccCccccccCCCCCcceEEEeCcchhhhhhCCccc
Confidence 999999998644332221 1235799999999999999843222222 124578999999999999999999999
Q ss_pred cccccccCCCCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcccceEEEEecCCCc---eEE
Q 004977 548 TSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYVDNIMIHADPFHN---YCV 624 (721)
Q Consensus 548 t~~~f~~~~~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~~---~~~ 624 (721)
|.+.| .+ |||+|||+|++|++|+++|.||.||+||+ +|++|+|.|||++|..||+|.+|+|++.++.. .++
T Consensus 395 t~~~~---~~--g~~~TGDlg~~d~~g~l~~~GR~~~~ik~-~G~~v~p~eIE~~l~~~~~V~~~~v~~~~~~~~~~~~~ 468 (540)
T PRK05857 395 TAEVL---ID--GWVNTGDLLERREDGFFYIKGRSSEMIIC-GGVNIAPDEVDRIAEGVSGVREAACYEIPDEEFGALVG 468 (540)
T ss_pred hhhhc---CC--CceeccceEEEcCCceEEEeccccccEec-CCEEECHHHHHHHHHhCCCeeEEEEEecCccccccceE
Confidence 99998 66 89999999999999999999999999997 69999999999999999999999999988653 466
Q ss_pred EEEEcChHHHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCCCCCCCCccCcccccC
Q 004977 625 ALVVPSHKALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEPWTPEAGLVTAALKIK 704 (721)
Q Consensus 625 a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~~~p~~~~~t~~gKi~ 704 (721)
++|++.+.. ++...+++.+.+.+.++ ++|++|++|+.+++++++ | +|++||++
T Consensus 469 ~~vv~~~~~--------------------~~~~~~~l~~~~~~~~~-~~l~~~~~P~~v~~~~~i--P----~t~~GKi~ 521 (540)
T PRK05857 469 LAVVASAEL--------------------DESAARALKHTIAARFR-RESEPMARPSTIVIVTDI--P----RTQSGKVM 521 (540)
T ss_pred EEEEeCCCC--------------------ChhhHHHHHHHHHHHHH-hhhccccCCeEEEEhhcC--C----CCCCccee
Confidence 666655321 01112345567777787 789999999999999988 6 99999999
Q ss_pred hHHHHHHHHHHHH
Q 004977 705 REQLKAKFKDDLQ 717 (721)
Q Consensus 705 R~~l~~~~~~~i~ 717 (721)
|++|++.++++-.
T Consensus 522 r~~l~~~~~~~~~ 534 (540)
T PRK05857 522 RASLAAAATADKA 534 (540)
T ss_pred HHHHHHhhhhccc
Confidence 9999999886543
No 35
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=100.00 E-value=6.5e-69 Score=669.57 Aligned_cols=577 Identities=17% Similarity=0.189 Sum_probs=419.5
Q ss_pred cccccccccCCCCCCCCCCccccccCCCCccccccCCC-CCCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccce
Q 004977 43 ARKKKVKQRGVPVEVGGEPGYAIRNAQIPELVEVPWKG-ASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFE 121 (721)
Q Consensus 43 p~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~-~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~ 121 (721)
|... +..+++.+..+.+.+.... ....|+. ..+++++|+++++++|+++|+++.... . +..
T Consensus 204 p~~~---l~~l~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~~~~~~~a~~~pd~~A~~~~~~~----~---~~~--- 265 (1389)
T TIGR03443 204 PDEP---IGKVSLITPSQKSLLPDPT-----KDLDWSGFRGAIHDIFADNAEKHPDRTCVVETPSF----L---DPS--- 265 (1389)
T ss_pred cCCc---eecccCCCHHHHhhhhccc-----cccCcCcccCcHHHHHHHHHHhCCCCeEEEecccc----c---ccc---
Confidence 7777 8888887776655432111 1122322 368999999999999999999863100 0 000
Q ss_pred eccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhc
Q 004977 122 KLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNET 201 (721)
Q Consensus 122 ~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~ 201 (721)
...+.+||+||.++++++|++|.+.|+++|++|+|+++|+++|++++|||+++|++++|++|.++++++.++++++
T Consensus 266 ----~~~~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~~~~~~i~~~lA~l~~G~~~vpldp~~p~~~~~~~l~~~ 341 (1389)
T TIGR03443 266 ----SKTRSFTYKQINEASNILAHYLLKTGIKRGDVVMIYAYRGVDLVVAVMGVLKAGATFSVIDPAYPPARQTIYLSVA 341 (1389)
T ss_pred ----CCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEecCCHHHHHHHHHHHhhCcEEeccCCCCcHHHHHHHHHhc
Confidence 1234799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEECccc---hhHHHhhhhc----CCCccEEEEecCCCCCccCCccCCCCCceEeeHHHHHhcCC--CCCCCCCCC
Q 004977 202 QVTTLICDSKQ---LKKLSAVSSS----LKTIKNVIYFENDGSEKDSGVSGGISNWTVSSFSEVEKLGK--RSPVDPSLP 272 (721)
Q Consensus 202 ~~~~vi~~~~~---~~~~~~~~~~----~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 272 (721)
+++++|++... ...+...... ...+..+...+...... . ... ....+...... .........
T Consensus 342 ~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~---~~~-~~~~~~~~~~~~~~~~~~~~~~ 412 (1389)
T TIGR03443 342 KPRALIVIEKAGTLDQLVRDYIDKELELRTEIPALALQDDGSLVG-----G---SLE-GGETDVLAPYQALKDTPTGVVV 412 (1389)
T ss_pred CCCEEEEeccccccchhhhhhhhcccccccccceEEecccccccc-----c---ccc-cccccccccccccccCCCCCcC
Confidence 99999987642 1111111110 01111111111000000 0 000 00000000000 001111234
Q ss_pred CCCCeEEEEeccCCCCCcchheeccHHHHHHHHHHHhhCCCCCCCcEEEeccChHHHHHHHHHHHHHHhcceEeeCcccc
Q 004977 273 SQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNPGRSDVYLAYLPLAHVLELAAESIMLCAGCAIGYGSTLT 352 (721)
Q Consensus 273 ~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~~~~~~~~ 352 (721)
.++|+|+|+|||||||.||||+++|+++++.+.++...+ ++.++|++++..|++|+.++..++.+|+.|+++++.+...
T Consensus 413 ~~~d~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~-~~~~~d~~~~~~~~~~d~~~~~i~~~L~~G~~l~~~~~~~ 491 (1389)
T TIGR03443 413 GPDSNPTLSFTSGSEGIPKGVLGRHFSLAYYFPWMAKRF-GLSENDKFTMLSGIAHDPIQRDMFTPLFLGAQLLVPTADD 491 (1389)
T ss_pred CCCCceEEEECCCCCCCCCEEEeccHHHHHHHHHHHHhc-CCCCCCEEEEecCceecchHHHHHHHHhCCCEEEEcChhh
Confidence 678999999999999999999999999999998888888 8999999999999999999988999999999999855433
Q ss_pred ccccchhhccCccCcceeecceEEeechHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHhhhccccccCCchhhhHH
Q 004977 353 MTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWD 432 (721)
Q Consensus 353 ~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (721)
..+. ..+...++++++|+++++|++++.|......
T Consensus 492 ~~~~-----~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~---------------------------------------- 526 (1389)
T TIGR03443 492 IGTP-----GRLAEWMAKYGATVTHLTPAMGQLLSAQATT---------------------------------------- 526 (1389)
T ss_pred ccCH-----HHHHHHHHHhCCeEEEeCHHHHHHHHhcccc----------------------------------------
Confidence 2222 1233348999999999999999887532100
Q ss_pred HHHHHHHHHHhCCcEEEEEecCCCCCHHHHHHHHHhh-CCccccccccccccccccccCCCC-----------CCCCccC
Q 004977 433 AIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICM-GAPIGQAYGLTETCAGSTFSEWDD-----------PSVGRVG 500 (721)
Q Consensus 433 ~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~~~~~~-g~~l~~~YG~TE~~~~~~~~~~~~-----------~~~~~vG 500 (721)
..+++|.+++||+++++...+.+.... +++++|+||+||++..++...... ....++|
T Consensus 527 ----------~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 596 (1389)
T TIGR03443 527 ----------PIPSLHHAFFVGDILTKRDCLRLQTLAENVCIVNMYGTTETQRAVSYFEIPSRSSDSTFLKNLKDVMPAG 596 (1389)
T ss_pred ----------cCCCccEEEEecccCCHHHHHHHHHhCCCCEEEECccCCccceeEEEEEccccccccchhhcccCcCcCC
Confidence 014899999999999999988777654 789999999999987666433211 1236799
Q ss_pred CCcCcceEEEEecCCCCcccCCCCCCcceEEEccccccccccCCCcccccccccCC------------------------
Q 004977 501 PPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVDE------------------------ 556 (721)
Q Consensus 501 ~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~~------------------------ 556 (721)
+|+++++++|+|.++. .. .+++|+.|||+|+||++++||+|+|+.|+++|..++
T Consensus 597 ~~~~~~~~~ivd~~~~-~~-~~~~G~~GEL~i~G~~v~~GY~~~p~~t~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (1389)
T TIGR03443 597 KGMKNVQLLVVNRNDR-TQ-TCGVGEVGEIYVRAGGLAEGYLGLPELNAEKFVNNWFVDPSHWIDLDKENNKPEREFWLG 674 (1389)
T ss_pred CccCCCEEEEECCccC-CC-cCCCCCceEEEecccccchhcCCChhHhhhhccCCcccCcccccccccccccccccccCC
Confidence 9999999999994332 11 256899999999999999999999999999985310
Q ss_pred CCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcccceEEEEecCCC---ceEEEEEEcChHH
Q 004977 557 RGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYVDNIMIHADPFH---NYCVALVVPSHKA 633 (721)
Q Consensus 557 ~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~~a~vv~~~~~ 633 (721)
++.+||+|||+|++++||+|+|+||+||+||+ +|+||+|.|||++|.+||.|.+++|++.++. ..++|+|++..+.
T Consensus 675 ~~~~~y~TGDlg~~~~dG~l~~~GR~dd~Iki-~G~rI~p~eIE~~l~~~p~V~~a~v~~~~~~~~~~~lva~vv~~~~~ 753 (1389)
T TIGR03443 675 PRDRLYRTGDLGRYLPDGNVECCGRADDQVKI-RGFRIELGEIDTHLSQHPLVRENVTLVRRDKDEEPTLVSYIVPQDKS 753 (1389)
T ss_pred CccceeecCCceeEcCCCCEEEecccCCEEEe-CcEEecHHHHHHHHHhCcchheeEEEEeeCCCCCeEEEEEEeccCcc
Confidence 12489999999999999999999999999997 6999999999999999999999999876543 4699999986321
Q ss_pred --HHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCCCCCCCCccCcccccChHHHHHH
Q 004977 634 --LEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEPWTPEAGLVTAALKIKREQLKAK 711 (721)
Q Consensus 634 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~~~p~~~~~t~~gKi~R~~l~~~ 711 (721)
...+...... ..+....+..........++++++++ .+||.||+|..+++++.+ | +|++|||+|++|++.
T Consensus 754 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~l~-~~Lp~y~~P~~~~~~~~l--P----~t~~GKidr~~L~~~ 825 (1389)
T TIGR03443 754 DELEEFKSEVDD-EESSDPVVKGLIKYRKLIKDIREYLK-KKLPSYAIPTVIVPLKKL--P----LNPNGKVDKPALPFP 825 (1389)
T ss_pred cccccccccccc-ccccccchhhhhhhhhhHHHHHHHHH-hhCCcccCCceEEEcccC--C----CCCCccccHhhcCCC
Confidence 1000000000 00000011111112334578889998 899999999999999988 6 999999999999765
Q ss_pred HHHHHH
Q 004977 712 FKDDLQ 717 (721)
Q Consensus 712 ~~~~i~ 717 (721)
+.++++
T Consensus 826 ~~~~~~ 831 (1389)
T TIGR03443 826 DTAQLA 831 (1389)
T ss_pred chhhhh
Confidence 544443
No 36
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=100.00 E-value=6.7e-68 Score=611.47 Aligned_cols=518 Identities=14% Similarity=0.130 Sum_probs=398.6
Q ss_pred CHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEc
Q 004977 83 TMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAILA 162 (721)
Q Consensus 83 tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~ 162 (721)
++.+.+.++ .+|+++|+++.. . .+..+.+||+||.++++++|++|+++|+++||+|+|++
T Consensus 87 n~~~~~~~~--~~~~~~Al~~~~-----------~-------~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~ 146 (655)
T PRK03584 87 NYAENLLRH--RRDDRPAIIFRG-----------E-------DGPRRELSWAELRRQVAALAAALRALGVGPGDRVAAYL 146 (655)
T ss_pred eHHHHhhcc--CCCCCeEEEEEC-----------C-------CCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEc
Confidence 454444432 589999998742 1 13346899999999999999999999999999999999
Q ss_pred cCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccc---------hhHHHhhhhcCCCccEEEEec
Q 004977 163 ETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQ---------LKKLSAVSSSLKTIKNVIYFE 233 (721)
Q Consensus 163 ~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~---------~~~~~~~~~~~~~~~~ii~~~ 233 (721)
+|++++++++|||+++|++++|+++.++.+++.++|++++++++|+++.. .+.+..+...++.++.++.++
T Consensus 147 ~n~~e~v~~~lA~~~~Gav~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 226 (655)
T PRK03584 147 PNIPETVVAMLATASLGAIWSSCSPDFGVQGVLDRFGQIEPKVLIAVDGYRYGGKAFDRRAKVAELRAALPSLEHVVVVP 226 (655)
T ss_pred CCCHHHHHHHHHHHHcCcEEEeeCCCCCHHHHHHHHHHcCCcEEEEccccccCCcccchHHHHHHHHhcCCCccEEEEEe
Confidence 99999999999999999999999999999999999999999999998753 234445555667777777665
Q ss_pred CCCCCccCCccCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHH-HHHHHhhCC
Q 004977 234 NDGSEKDSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVAT-AAAIKTLIP 312 (721)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~-~~~~~~~~~ 312 (721)
...... ..........|+++...............++++++|+|||||||.||||++||++++.. .......+
T Consensus 227 ~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~- 300 (655)
T PRK03584 227 YLGPAA-----AAAALPGALLWEDFLAPAEAAELEFEPVPFDHPLWILYSSGTTGLPKCIVHGHGGILLEHLKELGLHC- 300 (655)
T ss_pred cCCCcc-----cccccCCcccHHHHhhccccCCCCceecCCCCcEEEEecCCCCCCCceEEECccHHHHHHHHHHHHhc-
Confidence 322100 00001123456666542222222234456799999999999999999999999997644 45555556
Q ss_pred CCCCCcEEEeccChHHHHHHHHHHHHHHhcceEeeCccccccccchhhccCccCcceeecceEEeechHHHHHHHHHHHH
Q 004977 313 NPGRSDVYLAYLPLAHVLELAAESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVK 392 (721)
Q Consensus 313 ~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~ 392 (721)
.+.++|+++++.++.|+... ..+.+|+.|+++++.+....... +..++..++++++|++.++|++++.+.+....
T Consensus 301 ~~~~~d~~~~~~~~~~~~~~-~~~~~L~~G~t~vl~~~~~~~~~----~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~ 375 (655)
T PRK03584 301 DLGPGDRFFWYTTCGWMMWN-WLVSGLLVGATLVLYDGSPFYPD----PNVLWDLAAEEGVTVFGTSAKYLDACEKAGLV 375 (655)
T ss_pred CCCCCCEEEEcCCchHHhHH-HHHHHHHcCCEEEEeCCCCCCCC----HHHHHHHHHHHCCEEEEcCHHHHHHHHhcCCC
Confidence 88999999999999987543 35678999999998442211111 12234448999999999999999887642100
Q ss_pred HHHhhcchhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHHHHHHHhh--C
Q 004977 393 KVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICM--G 470 (721)
Q Consensus 393 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~~~~~~--g 470 (721)
. ......++||.+++||+++++++.+++.+.+ +
T Consensus 376 ~---------------------------------------------~~~~~l~sLr~i~~~Ge~l~~~~~~~~~~~~~~~ 410 (655)
T PRK03584 376 P---------------------------------------------GETHDLSALRTIGSTGSPLPPEGFDWVYEHVKAD 410 (655)
T ss_pred c---------------------------------------------cccCChhheEEEEEecCCCCHHHHHHHHHHhCCC
Confidence 0 0001125899999999999999999998887 4
Q ss_pred CccccccccccccccccccC-CCCCCCCccCCCcCcceEEEEecCCCCcccCCCCCCcceEEEccc--cccccccCCCcc
Q 004977 471 APIGQAYGLTETCAGSTFSE-WDDPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGF--NVTAGYFNNPGK 547 (721)
Q Consensus 471 ~~l~~~YG~TE~~~~~~~~~-~~~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~--~v~~gY~~~~~~ 547 (721)
+.+.+.||+||++....... ......+++|.|++|++++|+| ++|..+ +|+.|||+|+|| +++.|||++++.
T Consensus 411 ~~~~~~yG~TE~~~~~~~~~~~~~~~~g~~g~p~~g~~~~ivd-~~g~~~----~g~~GeL~v~gp~p~~~~gy~~~~~~ 485 (655)
T PRK03584 411 VWLASISGGTDICSCFVGGNPLLPVYRGEIQCRGLGMAVEAWD-EDGRPV----VGEVGELVCTKPFPSMPLGFWNDPDG 485 (655)
T ss_pred ceEEeccChHhhhcccccCCCCCCcCCCccCCCcCCceeEEEC-CCCCCC----CCCceEEEEccCCCCCcceeeCCCcc
Confidence 78999999999865443322 2233458999999999999999 556543 578999999996 799999999986
Q ss_pred cc--cccccCCCCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcccceEEEEecCCC---ce
Q 004977 548 TS--EVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYVDNIMIHADPFH---NY 622 (721)
Q Consensus 548 t~--~~f~~~~~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~ 622 (721)
++ +.+....+ |||+|||+|++|+||+|+|+||.||+||+ +|++|+|.|||++|.+||.|.+|+|+|.+++ +.
T Consensus 486 ~~~~~~~~~~~~--g~~~TGDl~~~d~dG~l~i~GR~dd~Ik~-~G~rI~p~EIE~~l~~~p~V~ea~vvg~~~~~~g~~ 562 (655)
T PRK03584 486 SRYRDAYFDTFP--GVWRHGDWIEITEHGGVVIYGRSDATLNR-GGVRIGTAEIYRQVEALPEVLDSLVIGQEWPDGDVR 562 (655)
T ss_pred chHHHhhhccCC--CEeecCCeEEECCCCeEEEEeeccCeeec-CcEEECHHHHHHHHHhCCCcceEEEEeeEcCCCCEE
Confidence 54 22211123 79999999999999999999999999997 6999999999999999999999999998874 46
Q ss_pred EEEEEEcChHHHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCCCCCCCCccCcccc
Q 004977 623 CVALVVPSHKALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEPWTPEAGLVTAALK 702 (721)
Q Consensus 623 ~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~~~p~~~~~t~~gK 702 (721)
++|+|++.++. .. .+.+.++|+++++ .+|++|++|+.|++++++ | +|++||
T Consensus 563 ~~a~vv~~~~~----------~~------------~~~~~~~l~~~~~-~~L~~~~~P~~i~~v~~l--P----~t~sGK 613 (655)
T PRK03584 563 MPLFVVLAEGV----------TL------------DDALRARIRTTIR-TNLSPRHVPDKIIAVPDI--P----RTLSGK 613 (655)
T ss_pred EEEEEEECCCC----------CC------------cHHHHHHHHHHHH-hhCCCCcCCCEEEECCCC--C----CCCCcc
Confidence 89999987532 00 1234467888888 899999999999999998 6 999999
Q ss_pred cChHHHHHHHH
Q 004977 703 IKREQLKAKFK 713 (721)
Q Consensus 703 i~R~~l~~~~~ 713 (721)
|+|+.|++.+.
T Consensus 614 i~r~~lr~~~~ 624 (655)
T PRK03584 614 KVELPVKKLLH 624 (655)
T ss_pred chHHHHHHHHc
Confidence 99999998874
No 37
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=9.1e-68 Score=599.52 Aligned_cols=518 Identities=23% Similarity=0.303 Sum_probs=417.1
Q ss_pred CCCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhC-CCCCCCEEE
Q 004977 81 ASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNF-GHNVDTRAA 159 (721)
Q Consensus 81 ~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~-Gv~~gd~V~ 159 (721)
..|+.++|.++++++|+++|+++ +++ .+||+||.++++++|+.|.+. |+++||+|+
T Consensus 9 ~~tl~~~l~~~a~~~~~~~a~~~------------~~~-----------~~Ty~~l~~~v~~~a~~L~~~~g~~~g~~V~ 65 (546)
T PRK08314 9 ETSLFHNLEVSARRYPDKTAIVF------------YGR-----------AISYRELLEEAERLAGYLQQECGVRKGDRVL 65 (546)
T ss_pred CCCHHHHHHHHHHHcCCCcceee------------cCc-----------eecHHHHHHHHHHHHHHHHHhhCCCCCCEEE
Confidence 36899999999999999999986 333 699999999999999999999 999999999
Q ss_pred EEccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccchhHHHhhhhcCCCccEEEEecCCCC--
Q 004977 160 ILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGS-- 237 (721)
Q Consensus 160 i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~-- 237 (721)
|+++|+++|+++++||+++|++++|+++.++.+++.+++++++++++|++.+....+......+ .++.++.......
T Consensus 66 i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 144 (546)
T PRK08314 66 LYMQNSPQFVIAYYAILRANAVVVPVNPMNREEELAHYVTDSGARVAIVGSELAPKVAPAVGNL-RLRHVIVAQYSDYLP 144 (546)
T ss_pred EECCCChHHHHHHHHHHHcCcEEeecCcCcCHHHHHHHHHhCCCeEEEEccchhhhHHHHhhcc-CcceEEEecchhhcc
Confidence 9999999999999999999999999999999999999999999999999988877666544433 2344443221100
Q ss_pred -CccCCcc-------C--CCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHHHHHH
Q 004977 238 -EKDSGVS-------G--GISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAI 307 (721)
Q Consensus 238 -~~~~~~~-------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~ 307 (721)
....... . ......+..|++...... ........++++|+|+|||||||.||||++||++++..+...
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~ 222 (546)
T PRK08314 145 AEPEIAVPAWLRAEPPLQALAPGGVVAWKEALAAGL--APPPHTAGPDDLAVLPYTSGTTGVPKGCMHTHRTVMANAVGS 222 (546)
T ss_pred cccccCcccccccccccccccccccccHHHHhcccC--CCCCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHH
Confidence 0000000 0 001123345666554321 112334567899999999999999999999999999998888
Q ss_pred HhhCCCCCCCcEEEeccChHHHHHHHH-HHHHHHhcceEeeCccccccccchhhccCccCcceeecceEEeechHHHHHH
Q 004977 308 KTLIPNPGRSDVYLAYLPLAHVLELAA-ESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRV 386 (721)
Q Consensus 308 ~~~~~~~~~~d~~l~~~pl~h~~g~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l 386 (721)
...+ .+.++|++++.+|++|.+++.. ++.++..|+++++.+... ...+...++++++|++.++|+++..+
T Consensus 223 ~~~~-~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~i~~~~~~~--------~~~~~~~i~~~~~t~~~~~p~~~~~l 293 (546)
T PRK08314 223 VLWS-NSTPESVVLAVLPLFHVTGMVHSMNAPIYAGATVVLMPRWD--------REAAARLIERYRVTHWTNIPTMVVDF 293 (546)
T ss_pred HHhh-CCCCCceEEEEcCchHHHHHHHHHHHHHHcCCeEEecCCCC--------HHHHHHHHHHhcCceecccHHHHHHH
Confidence 7777 8899999999999999999865 667899999999854321 11123338999999999999999887
Q ss_pred HHHHHHHHHhhcchhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHHHHHH
Q 004977 387 REGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFIN 466 (721)
Q Consensus 387 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~~~ 466 (721)
...... .....+++|.+++||+++++++.+++.
T Consensus 294 l~~~~~-----------------------------------------------~~~~~~~l~~~~~gG~~~~~~~~~~~~ 326 (546)
T PRK08314 294 LASPGL-----------------------------------------------AERDLSSLRYIGGGGAAMPEAVAERLK 326 (546)
T ss_pred HhCCCc-----------------------------------------------cccCchhhheeeeccccCCHHHHHHHH
Confidence 642100 001124789999999999999999999
Q ss_pred HhhCCccccccccccccccccccCCCCCCCCccCCCcCcceEEEEecCCCCcccCCCCCCcceEEEccccccccccCCCc
Q 004977 467 ICMGAPIGQAYGLTETCAGSTFSEWDDPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPG 546 (721)
Q Consensus 467 ~~~g~~l~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~ 546 (721)
+.+++++++.||+||++..+..........+++|+|+++++++|+|++++..+ +.|+.|||+|+|++++.||+++++
T Consensus 327 ~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~d~~~~~~~---~~g~~Gel~v~g~~~~~gY~~~~~ 403 (546)
T PRK08314 327 ELTGLDYVEGYGLTETMAQTHSNPPDRPKLQCLGIPTFGVDARVIDPETLEEL---PPGEVGEIVVHGPQVFKGYWNRPE 403 (546)
T ss_pred HHcCCcEEecccccccccceecCCCcCCCCCccCcccCCeEEEEEeCCCCcCC---CCCCceEEEEECCchhccccCChh
Confidence 88899999999999998776655544445689999999999999996666654 478899999999999999999999
Q ss_pred ccccccccCCCCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcccceEEEEecCCC---ceE
Q 004977 547 KTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYVDNIMIHADPFH---NYC 623 (721)
Q Consensus 547 ~t~~~f~~~~~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~ 623 (721)
.|.+.|.. .++.+||+|||+|+++++|++++.||+||+||+ +|++|+|.|||++|.++|+|.+++|++.++. +.+
T Consensus 404 ~t~~~f~~-~~~~~~~~TGDl~~~~~~g~l~~~GR~~d~i~~-~G~~v~~~eIE~~i~~~~~v~~~~v~~~~~~~~~~~~ 481 (546)
T PRK08314 404 ATAEAFIE-IDGKRFFRTGDLGRMDEEGYFFITDRLKRMINA-SGFKVWPAEVENLLYKHPAIQEACVIATPDPRRGETV 481 (546)
T ss_pred Hhhhhhhh-cCCCceEecCCEEEEcCCCcEEEEecchhhEEe-CCEEECHHHHHHHHHhCcchheEEEEeCCCcccCcee
Confidence 99988852 244479999999999999999999999999997 5999999999999999999999999998765 458
Q ss_pred EEEEEcChHHHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCCCCCCCCccCccccc
Q 004977 624 VALVVPSHKALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEPWTPEAGLVTAALKI 703 (721)
Q Consensus 624 ~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~~~p~~~~~t~~gKi 703 (721)
+|+|+++++... .. ..++++++++ ++|++|++|+.+++++++ | +|++||+
T Consensus 482 ~a~v~~~~~~~~--------~~---------------~~~~l~~~~~-~~l~~~~~P~~~~~v~~i--P----~t~~GKv 531 (546)
T PRK08314 482 KAVVVLRPEARG--------KT---------------TEEEIIAWAR-EHMAAYKYPRIVEFVDSL--P----KSGSGKI 531 (546)
T ss_pred EEEEEECCCCCC--------CC---------------CHHHHHHHHH-HhcccCCCCcEEEEecCC--C----CCCccce
Confidence 999998764200 00 0257888888 899999999999999988 6 9999999
Q ss_pred ChHHHHHHHHHH
Q 004977 704 KREQLKAKFKDD 715 (721)
Q Consensus 704 ~R~~l~~~~~~~ 715 (721)
+|++|++..++.
T Consensus 532 ~r~~L~~~~~~~ 543 (546)
T PRK08314 532 LWRQLQEQEKAR 543 (546)
T ss_pred eHHHHHHHHhhh
Confidence 999998776553
No 38
>PRK13382 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=4.6e-68 Score=599.11 Aligned_cols=487 Identities=19% Similarity=0.225 Sum_probs=398.8
Q ss_pred CCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEE
Q 004977 82 STMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAIL 161 (721)
Q Consensus 82 ~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~ 161 (721)
.++.++|.++++++||++|++. ++. .+||+||.++++++|++|.++|+++|++|+++
T Consensus 43 ~~~~~~l~~~a~~~p~~~a~~~------------~~~-----------~~Ty~el~~~~~~~A~~L~~~g~~~g~~V~i~ 99 (537)
T PRK13382 43 MGPTSGFAIAAQRCPDRPGLID------------ELG-----------TLTWRELDERSDALAAALQALPIGEPRVVGIM 99 (537)
T ss_pred CCHHHHHHHHHHhCCCCeEEEe------------CCC-----------eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEE
Confidence 5899999999999999999985 222 69999999999999999999999999999999
Q ss_pred ccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccchhHHHhhhhcCCCccEEEEecCCCCCccC
Q 004977 162 AETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEKDS 241 (721)
Q Consensus 162 ~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~ 241 (721)
++|+++|+++++||+++|++++|+++.++.+++.+++++++++++|++......+.......+....++......
T Consensus 100 ~~n~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 174 (537)
T PRK13382 100 CRNHRGFVEALLAANRIGADILLLNTSFAGPALAEVVTREGVDTVIYDEEFSATVDRALADCPQATRIVAWTDED----- 174 (537)
T ss_pred ecCcHHHHHHHHHHHHcCcEEEecCcccCHHHHHHHHHhcCCCEEEEchhhHHHHHHHHhhccccceEEEecCCc-----
Confidence 999999999999999999999999999999999999999999999999887666655444444444444332211
Q ss_pred CccCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHHHHHHHhhCCCCCCCcEEE
Q 004977 242 GVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNPGRSDVYL 321 (721)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~d~~l 321 (721)
....++++....... .....+++.++++|||||||.||||+++|+++..........+ .+..+++++
T Consensus 175 ---------~~~~~~~~~~~~~~~---~~~~~~~~~~~il~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~-~~~~~~~~l 241 (537)
T PRK13382 175 ---------HDLTVEVLIAAHAGQ---RPEPTGRKGRVILLTSGTTGTPKGARRSGPGGIGTLKAILDRT-PWRAEEPTV 241 (537)
T ss_pred ---------ccccHHHHhhccCcC---CCCCCCCCCeEEEECCCCCCCCCEEEeccchHHHHHHHHHHhh-CCCCCCeEE
Confidence 012344443322111 1123468899999999999999999999999988888777777 788899999
Q ss_pred eccChHHHHHHHHHHHHHHhcceEeeC---ccccccccchhhccCccCcceeecceEEeechHHHHHHHHHHHHHHHhhc
Q 004977 322 AYLPLAHVLELAAESIMLCAGCAIGYG---STLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKG 398 (721)
Q Consensus 322 ~~~pl~h~~g~~~~~~~l~~G~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~ 398 (721)
..+|++|.+++...+.++..|+++++. ++..+.+. ++++++|++.++|++++.+.+......
T Consensus 242 ~~~p~~~~~g~~~~~~~l~~g~~~~~~~~~~~~~~~~~-----------i~~~~vt~~~~~P~~~~~l~~~~~~~~---- 306 (537)
T PRK13382 242 IVAPMFHAWGFSQLVLAASLACTIVTRRRFDPEATLDL-----------IDRHRATGLAVVPVMFDRIMDLPAEVR---- 306 (537)
T ss_pred EecChHhhhHHHHHHHHHhcCcEEEECCCcCHHHHHHH-----------HHHhCCEEEEehHHHHHHHHcCCchhc----
Confidence 999999999998788889999998873 33333333 999999999999999998865211000
Q ss_pred chhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHHHHHHHhhCCccccccc
Q 004977 399 GLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMGAPIGQAYG 478 (721)
Q Consensus 399 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~~~~~~g~~l~~~YG 478 (721)
...+++++|.+++||+++++++.+.+.+.+|.+++|.||
T Consensus 307 -----------------------------------------~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~i~~~YG 345 (537)
T PRK13382 307 -----------------------------------------NRYSGRSLRFAAASGSRMRPDVVIAFMDQFGDVIYNNYN 345 (537)
T ss_pred -----------------------------------------ccCCccceeEEEEcCCCCCHHHHHHHHHHcCCcEEeccc
Confidence 001124799999999999999999999988999999999
Q ss_pred cccccccccccCCC-CCCCCccCCCcCcceEEEEecCCCCcccCCCCCCcceEEEccccccccccCCCcccccccccCCC
Q 004977 479 LTETCAGSTFSEWD-DPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVDER 557 (721)
Q Consensus 479 ~TE~~~~~~~~~~~-~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~~~ 557 (721)
+||++.+++..... ....+++|+|+++++++|+| +++..+ +.|+.|||+++|++++.||+ ++.|.. | .+
T Consensus 346 ~TE~~~~~~~~~~~~~~~~~~vG~p~~~~~~~i~d-~~~~~~---~~g~~GEl~v~g~~~~~gY~--~~~~~~-~---~~ 415 (537)
T PRK13382 346 ATEAGMIATATPADLRAAPDTAGRPAEGTEIRILD-QDFREV---PTGEVGTIFVRNDTQFDGYT--SGSTKD-F---HD 415 (537)
T ss_pred ccccCcceecChhHhccCCCCccccCcCcEEEEEC-CCCCCC---CCCCeeEEEEEcCCcccCcc--ccchhh-c---cC
Confidence 99998766543321 23457999999999999999 556554 47899999999999999998 555543 4 45
Q ss_pred CcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcccceEEEEecCCCc---eEEEEEEcChHHH
Q 004977 558 GMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYVDNIMIHADPFHN---YCVALVVPSHKAL 634 (721)
Q Consensus 558 g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~~---~~~a~vv~~~~~~ 634 (721)
|||+|||++++|+||+++|+||+||+||+ +|++|+|.|||++|.+||+|.+++|++.++.. .++|+|++.++.
T Consensus 416 --g~~~TGDl~~~~~~g~l~~~GR~dd~ik~-~G~~v~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~vv~~~~~- 491 (537)
T PRK13382 416 --GFMASGDVGYLDENGRLFVVGRDDEMIVS-GGENVYPIEVEKTLATHPDVAEAAVIGVDDEQYGQRLAAFVVLKPGA- 491 (537)
T ss_pred --CCEeeCceEEEeCCCcEEEeccccceeEE-CCEEECHHHHHHHHHhCCCEeeEEEEccCccccCCEEEEEEEECCCC-
Confidence 89999999999999999999999999996 69999999999999999999999999998653 488999876532
Q ss_pred HHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCCCCCCCCccCcccccChHHHHH
Q 004977 635 EKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEPWTPEAGLVTAALKIKREQLKA 710 (721)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~~~p~~~~~t~~gKi~R~~l~~ 710 (721)
. ...++++++++ .+|+.|++|+.+++++++ | +|++||++|++|++
T Consensus 492 ---------~---------------~~~~~l~~~l~-~~l~~~~~P~~i~~v~~l--P----~t~~gK~~r~~L~~ 536 (537)
T PRK13382 492 ---------S---------------ATPETLKQHVR-DNLANYKVPRDIVVLDEL--P----RGATGKILRRELQA 536 (537)
T ss_pred ---------C---------------CCHHHHHHHHH-HhccCCCCCcEEEEeccC--C----CCCCCCCcHHhhCC
Confidence 0 01267888888 899999999999999887 6 99999999999864
No 39
>PLN02246 4-coumarate--CoA ligase
Probab=100.00 E-value=1.5e-67 Score=595.73 Aligned_cols=506 Identities=24% Similarity=0.311 Sum_probs=409.3
Q ss_pred ccCCCCCCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCC
Q 004977 76 VPWKGASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVD 155 (721)
Q Consensus 76 ~~~~~~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~g 155 (721)
.+++...|+.+++.++++++|+++|+++.+ +++ ++||.||.++++++|++|.+.|+++|
T Consensus 17 ~~~~~~~~~~~~l~~~~~~~~~~~a~~~~~----------~~~-----------~~ty~el~~~~~~la~~L~~~g~~~g 75 (537)
T PLN02246 17 IYIPNHLPLHDYCFERLSEFSDRPCLIDGA----------TGR-----------VYTYADVELLSRRVAAGLHKLGIRQG 75 (537)
T ss_pred CCCCCCCcHHHHHHHHHHhCCCCeEEEecC----------CCc-----------eeeHHHHHHHHHHHHHHHHHhCCCCC
Confidence 455666799999999999999999997521 233 69999999999999999999999999
Q ss_pred CEEEEEccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccchhHHHhhhhcCCCccEEEEecCC
Q 004977 156 TRAAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFEND 235 (721)
Q Consensus 156 d~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~ii~~~~~ 235 (721)
|+|+++++|+++|+++++||+++|++++|+++.++.+++..+++.++++++|++......+...... +.+ .++.++..
T Consensus 76 d~V~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~-~~~-~~i~~~~~ 153 (537)
T PLN02246 76 DVVMLLLPNCPEFVLAFLGASRRGAVTTTANPFYTPAEIAKQAKASGAKLIITQSCYVDKLKGLAED-DGV-TVVTIDDP 153 (537)
T ss_pred CEEEEECCCChHHHHHHHHHHHcCEEEecCCCCCCHHHHHHHHHhcCCcEEEEccchHHHHHHHhhc-CCc-eEEEeCCC
Confidence 9999999999999999999999999999999999999999999999999999998877666554321 222 34444322
Q ss_pred CCCccCCccCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHHHHHHHh----hC
Q 004977 236 GSEKDSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKT----LI 311 (721)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~----~~ 311 (721)
. .....+.++..... ...+.....++++++++|||||||.||||+++|++++..+..... .+
T Consensus 154 ~-------------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~~~~~~~ 219 (537)
T PLN02246 154 P-------------EGCLHFSELTQADE-NELPEVEISPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNL 219 (537)
T ss_pred C-------------CCceeHHHHhcCCC-CCCCCCCCCccCEEEEEeCCCCCCCCceEEEeHHHHHHHHHHHhhcccccc
Confidence 1 11234444433211 112223456789999999999999999999999999988765543 34
Q ss_pred CCCCCCcEEEeccChHHHHHHHH-HHHHHHhcceEeeCccccccccchhhccCccCcceeecceEEeechHHHHHHHHHH
Q 004977 312 PNPGRSDVYLAYLPLAHVLELAA-ESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGV 390 (721)
Q Consensus 312 ~~~~~~d~~l~~~pl~h~~g~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~ 390 (721)
.+.++|++++.+|++|.+++.. ++.++..|+++++.+.... ..++..++++++|++.++|+++..|.+..
T Consensus 220 -~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~~~~~--------~~~~~~i~~~~~t~~~~~p~~~~~l~~~~ 290 (537)
T PLN02246 220 -YFHSDDVILCVLPMFHIYSLNSVLLCGLRVGAAILIMPKFEI--------GALLELIQRHKVTIAPFVPPIVLAIAKSP 290 (537)
T ss_pred -CCCCCcEEEEeechHHHHHHHHHHHHHHhcCCEEEEeCCCCH--------HHHHHHHHHhCceEEEcchHHHHHHhcCc
Confidence 6889999999999999999866 5667999999998543211 12333499999999999999998876521
Q ss_pred HHHHHhhcchhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHHHHHHHhh-
Q 004977 391 VKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICM- 469 (721)
Q Consensus 391 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~~~~~~- 469 (721)
.. .....+++|.+++||+++++++.+.+.+.+
T Consensus 291 ~~-----------------------------------------------~~~~~~~lr~~~~gg~~l~~~~~~~~~~~~~ 323 (537)
T PLN02246 291 VV-----------------------------------------------EKYDLSSIRMVLSGAAPLGKELEDAFRAKLP 323 (537)
T ss_pred cc-----------------------------------------------cccCccceeEEEEecCcCCHHHHHHHHHHcC
Confidence 10 001124899999999999999999999887
Q ss_pred CCccccccccccccccccccCC-----CCCCCCccCCCcCcceEEEEecCCCCcccCCCCCCcceEEEccccccccccCC
Q 004977 470 GAPIGQAYGLTETCAGSTFSEW-----DDPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNN 544 (721)
Q Consensus 470 g~~l~~~YG~TE~~~~~~~~~~-----~~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~ 544 (721)
++.+++.||+||++.+++.... .....+++|+|+++++++|+|++++..+ ++|+.|||+|+|++++.||+++
T Consensus 324 ~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~---~~g~~Gel~v~g~~~~~GY~~~ 400 (537)
T PLN02246 324 NAVLGQGYGMTEAGPVLAMCLAFAKEPFPVKSGSCGTVVRNAELKIVDPETGASL---PRNQPGEICIRGPQIMKGYLND 400 (537)
T ss_pred CCeEeccccccccCcccccccccCCCCccccCCccccccCCcEEEEecCCCCCcC---CCCCceEEEEECCchhccccCC
Confidence 6789999999999876543211 1234578999999999999996666554 4889999999999999999999
Q ss_pred CcccccccccCCCCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcccceEEEEecCCC---c
Q 004977 545 PGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYVDNIMIHADPFH---N 621 (721)
Q Consensus 545 ~~~t~~~f~~~~~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~ 621 (721)
++.|.+.|. .+ |||+|||+|+++++|+++|+||.||+||+ +|++|+|.+||++|.+||+|.+++|++.++. +
T Consensus 401 ~~~~~~~~~--~~--~~~~TGD~~~~~~~g~l~~~GR~dd~i~~-~G~~i~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~ 475 (537)
T PLN02246 401 PEATANTID--KD--GWLHTGDIGYIDDDDELFIVDRLKELIKY-KGFQVAPAELEALLISHPSIADAAVVPMKDEVAGE 475 (537)
T ss_pred chhhhhccc--CC--CCeeecceEEEeCCCeEEEEecccceEEE-CCEEECcHHHHHHHHhCCCeeEEEEEcccCccCCc
Confidence 999998885 55 89999999999999999999999999997 5999999999999999999999999998765 3
Q ss_pred eEEEEEEcChHHHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCCCCCCCCccCccc
Q 004977 622 YCVALVVPSHKALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEPWTPEAGLVTAAL 701 (721)
Q Consensus 622 ~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~~~p~~~~~t~~g 701 (721)
.++++|++.++. .. ..++|+++++ .+|+.|++|+++++++++ | +|++|
T Consensus 476 ~~~~~v~~~~~~----------~~---------------~~~~l~~~l~-~~l~~~~~p~~i~~~~~~--P----~t~~G 523 (537)
T PLN02246 476 VPVAFVVRSNGS----------EI---------------TEDEIKQFVA-KQVVFYKRIHKVFFVDSI--P----KAPSG 523 (537)
T ss_pred eeEEEEEeCCCC----------CC---------------CHHHHHHHHH-hhCcCccccceEEEeccC--C----CCCcc
Confidence 588888876532 00 0257888888 899999999999999987 6 99999
Q ss_pred ccChHHHHHHHHH
Q 004977 702 KIKREQLKAKFKD 714 (721)
Q Consensus 702 Ki~R~~l~~~~~~ 714 (721)
|++|++|++++.+
T Consensus 524 Ki~r~~L~~~~~~ 536 (537)
T PLN02246 524 KILRKDLRAKLAA 536 (537)
T ss_pred hhhHHHHHHHHhc
Confidence 9999999988753
No 40
>PRK06060 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.6e-68 Score=619.59 Aligned_cols=479 Identities=19% Similarity=0.243 Sum_probs=386.1
Q ss_pred CCHHHHHHHHHHh--CCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEE
Q 004977 82 STMAALFEQSCKS--HPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAA 159 (721)
Q Consensus 82 ~tl~~~~~~~a~~--~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~ 159 (721)
.|+.++|.+++++ +||++|++. +. .+||+||.++++++|++|.+.|+++|++|+
T Consensus 4 ~~~~~~~~~~a~~~~~pd~~a~~~-------------~~-----------~~Ty~eL~~~~~~lA~~L~~~g~~~g~~V~ 59 (705)
T PRK06060 4 GNLAGLLAEQASEAGWYDRPAFYA-------------AD-----------VVTHGQIHDGAARLGEVLRNRGLSSGDRVL 59 (705)
T ss_pred cCHHHHHHHHHhhccCCCceEEEe-------------cC-----------ceeHHHHHHHHHHHHHHHHHcCCCCCCEEE
Confidence 3789999999886 799999973 22 599999999999999999999999999999
Q ss_pred EEccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccchhHHHhhhhcCCCccEEEEecCCCCCc
Q 004977 160 ILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEK 239 (721)
Q Consensus 160 i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~ 239 (721)
|+++|+++|+++++||+++|++++|++|.++.+++.+++++++++++|++......+... . ++
T Consensus 60 i~~~~~~~~~~~~la~~~aG~~~vpi~p~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~-------~-~~--------- 122 (705)
T PRK06060 60 LCLPDSPDLVQLLLACLARGVMAFLANPELHRDDHALAARNTEPALVVTSDALRDRFQPS-------R-VA--------- 122 (705)
T ss_pred EECCCCHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCCcEEEEchHHhhhhccc-------c-cc---------
Confidence 999999999999999999999999999999999999999999999999987654332110 0 00
Q ss_pred cCCccCCCCCceEeeHHHHHhcC-CCCCCCCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHHHHHHH-hhCCCCCCC
Q 004977 240 DSGVSGGISNWTVSSFSEVEKLG-KRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIK-TLIPNPGRS 317 (721)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~-~~~~~~~~~ 317 (721)
...++.... ...+.......++++|+|+|||||||.||||+++|+++.+.+.++. ..+ .+.++
T Consensus 123 --------------~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~~~~~~~~~~~~~~-~~~~~ 187 (705)
T PRK06060 123 --------------EAAELMSEAARVAPGGYEPMGGDALAYATYTSGTTGPPKAAIHRHADPLTFVDAMCRKAL-RLTPE 187 (705)
T ss_pred --------------hhhhhhhhccccCCCCCCCCCCCCeEEEEECCCCCCCCcEEEEccccHHHHHHHHHHHhh-CCCCc
Confidence 001111000 0011111234578999999999999999999999999998877664 345 78899
Q ss_pred cEEEeccChHHHHHHHH-HHHHHHhcceEeeCccccccccchhhccCccCcceeecceEEeechHHHHHHHHHHHHHHHh
Q 004977 318 DVYLAYLPLAHVLELAA-ESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEE 396 (721)
Q Consensus 318 d~~l~~~pl~h~~g~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~ 396 (721)
|++++..|++|.+++.. ++.+|..|+++++.+.... . ..+...+.++++|+++++|+++..+.+....
T Consensus 188 d~~l~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~~~~--~-----~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~---- 256 (705)
T PRK06060 188 DTGLCSARMYFAYGLGNSVWFPLATGGSAVINSAPVT--P-----EAAAILSARFGPSVLYGVPNFFARVIDSCSP---- 256 (705)
T ss_pred ceeEEeccchhhcchhHHHHHHHhcCCEEEEeCCCCC--H-----HHHHHHHHhcCCeEEeeHHHHHHHHHHhccc----
Confidence 99999999999988754 6778999999988442111 1 1112237899999999999999988653110
Q ss_pred hcchhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHHHHHHHhh-CCcccc
Q 004977 397 KGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICM-GAPIGQ 475 (721)
Q Consensus 397 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~~~~~~-g~~l~~ 475 (721)
...+++|.+++||+++++++.+.+.+.+ +++++|
T Consensus 257 ---------------------------------------------~~~~slr~i~~gGe~l~~~~~~~~~~~~~~~~~~~ 291 (705)
T PRK06060 257 ---------------------------------------------DSFRSLRCVVSAGEALELGLAERLMEFFGGIPILD 291 (705)
T ss_pred ---------------------------------------------ccccceeEEEEecCcCCHHHHHHHHHHcCCCceEe
Confidence 0114899999999999999999888877 589999
Q ss_pred ccccccccccccccCCCCCCCCccCCCcCcceEEEEecCCCCcccCCCCCCcceEEEccccccccccCCCcccccccccC
Q 004977 476 AYGLTETCAGSTFSEWDDPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVD 555 (721)
Q Consensus 476 ~YG~TE~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~ 555 (721)
.||+||++.++........+.+++|+|+++++++|+| +++.. +++|+.|||||+|++++.||||+|+.+..
T Consensus 292 ~YG~tE~~~~~~~~~~~~~~~~~iG~p~~~~~v~i~d-~~g~~---~~~g~~GEl~i~g~~v~~GY~~~~~~~~~----- 362 (705)
T PRK06060 292 GIGSTEVGQTFVSNRVDEWRLGTLGRVLPPYEIRVVA-PDGTT---AGPGVEGDLWVRGPAIAKGYWNRPDSPVA----- 362 (705)
T ss_pred eeeccccCceEEeccCCCCCcCcccccCCCcEEEEEC-CCCCC---CCCCCceEEEEccchhhhhhhCCCccccc-----
Confidence 9999999866544433344568899999999999999 55654 45889999999999999999999987532
Q ss_pred CCCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcccceEEEEecCCC---ceEEEEEEcChH
Q 004977 556 ERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYVDNIMIHADPFH---NYCVALVVPSHK 632 (721)
Q Consensus 556 ~~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~~a~vv~~~~ 632 (721)
.+ |||+|||+|++++||+|+|+||+||+||+ +|++|+|.|||++|.+||.|.+++|++.++. ..++|+|++..+
T Consensus 363 ~~--~~~~TGDl~~~~~dG~l~~~GR~dd~ik~-~G~~v~~~eIE~~l~~~~~V~~a~vv~~~~~~~~~~~~a~vv~~~~ 439 (705)
T PRK06060 363 NE--GWLDTRDRVCIDSDGWVTYRCRADDTEVI-GGVNVDPREVERLIIEDEAVAEAAVVAVRESTGASTLQAFLVATSG 439 (705)
T ss_pred CC--CcEECCeeEEECCCceEEEecccCceEEE-CCEEECHHHHHHHHHhCCCeeEEEEEeecCccCCeeEEEEEEeccc
Confidence 34 89999999999999999999999999998 5999999999999999999999999998765 368999987643
Q ss_pred HHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCCCCCCCCccCcccccChHHHHHHH
Q 004977 633 ALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEPWTPEAGLVTAALKIKREQLKAKF 712 (721)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~~~p~~~~~t~~gKi~R~~l~~~~ 712 (721)
.. . + ....++++++++ ++||.||+|..|++++++ | +|++||++|++|++.+
T Consensus 440 ~~--------~----------~----~~~~~~i~~~l~-~~L~~~~~P~~i~~v~~i--P----~t~~GKidr~~L~~~~ 490 (705)
T PRK06060 440 AT--------I----------D----GSVMRDLHRGLL-NRLSAFKVPHRFAVVDRL--P----RTPNGKLVRGALRKQS 490 (705)
T ss_pred cC--------c----------C----hHHHHHHHHHHH-HhCCCCcCCcEEEEeecC--C----CCcchhhHHHHHHhhc
Confidence 20 0 0 112357888888 899999999999999988 6 9999999999999876
Q ss_pred H
Q 004977 713 K 713 (721)
Q Consensus 713 ~ 713 (721)
.
T Consensus 491 ~ 491 (705)
T PRK06060 491 P 491 (705)
T ss_pred c
Confidence 3
No 41
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3.8e-68 Score=611.28 Aligned_cols=514 Identities=20% Similarity=0.229 Sum_probs=390.5
Q ss_pred CCCCCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCCCEE
Q 004977 79 KGASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRA 158 (721)
Q Consensus 79 ~~~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V 158 (721)
+...|+.++|+++++++|+++|+++.+.. ++. .+.++.+||+||.++++++|++|.+. +++||+|
T Consensus 18 ~~~~~l~~~l~~~a~~~~~~~a~~~~~~~--------~~~------~~~~~~~Ty~el~~~v~~lA~~L~~~-~~~gd~V 82 (631)
T PRK07769 18 PPNTNLVRHVERWAKVRGDKLAYRFLDFS--------TER------DGVARDLTWSQFGARNRAVGARLQQV-TKPGDRV 82 (631)
T ss_pred cccCCHHHHHHHHHHhCCCCeEEEEeccC--------CCC------CCceeEeeHHHHHHHHHHHHHHHHHh-cCCCCEE
Confidence 34478999999999999999999864200 001 12345799999999999999999987 8999999
Q ss_pred EEEccCcHhHHHHHHHHHhcCCEEEEe-cCCCC--HHHHHHHHHhcCceEEEECccchhHHHhhhhcCCC--ccEEEEec
Q 004977 159 AILAETCVEWFIAFQGCFRQSITVVTI-YSSLG--EDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKT--IKNVIYFE 233 (721)
Q Consensus 159 ~i~~~n~~e~~~~~lA~~~~G~~~vpl-~~~~~--~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~--~~~ii~~~ 233 (721)
+|+++|+++|++++|||+++|++++|+ ++..+ .+++.+++++++++++|++++..+.+.......+. ...++.++
T Consensus 83 ~i~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (631)
T PRK07769 83 AILAPQNLDYLIAFFGALYAGRIAVPLFDPAEPGHVGRLHAVLDDCTPSAILTTTDSAEGVRKFFRARPAKERPRVIAVD 162 (631)
T ss_pred EEEcCCChHHHHHHHHHHHcCCEEEeeCCCCccchHHHHHHHHHhCCCCEEEEChHHHHHHHHHHhhccccccceEEEcc
Confidence 999999999999999999999999999 45554 68899999999999999998776655544333321 12233322
Q ss_pred CCCCCccCCccCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHHHHHHHhhCCC
Q 004977 234 NDGSEKDSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPN 313 (721)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~ 313 (721)
..... . ..........++++++|+|||||||.||||++||+++.+.+......+ +
T Consensus 163 ~~~~~-----------------------~-~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~-~ 217 (631)
T PRK07769 163 AVPDE-----------------------V-GATWVPPEANEDTIAYLQYTSGSTRIPAGVQITHLNLPTNVLQVIDAL-E 217 (631)
T ss_pred ccccc-----------------------c-ccccCCCCCCCCCeEEEEeCCCCCCCCcEEEEcHHHHHHHHHHHHHHc-C
Confidence 11000 0 000111234678999999999999999999999999999888887777 8
Q ss_pred CCCCcEEEeccChHHHHHHHHHHHHHHhcceEeeCccccccccchhhccCccCcceeecc---eEEeechHHHHHHHHHH
Q 004977 314 PGRSDVYLAYLPLAHVLELAAESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKP---TLMAAVPAIFDRVREGV 390 (721)
Q Consensus 314 ~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---t~l~~~P~~~~~l~~~~ 390 (721)
+.++|++++++|++|++|+...+.+++.|+++++.++..+... +..+...+.++++ |++..+|+++..+....
T Consensus 218 ~~~~d~~l~~~Pl~h~~gl~~~~~~~~~G~~~~~~~~~~~~~~----~~~~~~~i~~~~~~~~~~~~~~p~~~~~l~~~~ 293 (631)
T PRK07769 218 GQEGDRGVSWLPFFHDMGLITVLLPALLGHYITFMSPAAFVRR----PGRWIRELARKPGGTGGTFSAAPNFAFEHAAAR 293 (631)
T ss_pred CCCcceEEEeCCCcCchhhHHHHHHHhhCCeEEEEChHHHHhC----HHHHHHHHHhhccccCceEeeCCchHHHHHHhh
Confidence 8899999999999999999887778888999988654322111 1112223666665 78999999887665310
Q ss_pred HHHHHhhcchhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHHHHHHHhh-
Q 004977 391 VKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICM- 469 (721)
Q Consensus 391 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~~~~~~- 469 (721)
. ..... ......+++|.+++||+++++++.+.+.+.+
T Consensus 294 ~--~~~~~----------------------------------------~~~~~l~~lr~~~~gg~~l~~~~~~~~~~~~~ 331 (631)
T PRK07769 294 G--LPKDG----------------------------------------EPPLDLSNVKGLLNGSEPVSPASMRKFNEAFA 331 (631)
T ss_pred c--cchhc----------------------------------------ccCcchhheeeEEeccCCCCHHHHHHHHHHHh
Confidence 0 00000 0001225899999999999999999888876
Q ss_pred --CC---ccccccccccccccccccCCCCC---------------------------CCCccCCCcCcceEEEEecCCCC
Q 004977 470 --GA---PIGQAYGLTETCAGSTFSEWDDP---------------------------SVGRVGPPVPCCYIKLVSWDEGG 517 (721)
Q Consensus 470 --g~---~l~~~YG~TE~~~~~~~~~~~~~---------------------------~~~~vG~p~p~~~v~i~d~~~~~ 517 (721)
|+ .++++||+||++..++....... ...++|+|+++++++|+|.+++.
T Consensus 332 ~~g~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~G~~~~~~~~~ivd~~~g~ 411 (631)
T PRK07769 332 PYGLPPTAIKPSYGMAEATLFVSTTPMDEEPTVIYVDRDELNAGRFVEVPADAPNAVAQVSAGKVGVSEWAVIVDPETAS 411 (631)
T ss_pred hcCCChhhcccccchhhheeEEeccCCCCCceEEEEcHHHHhCCCeEecCCCCCCceeEEeCCCcCCCcEEEEEcCCCCc
Confidence 33 59999999999876554332110 12479999999999999966665
Q ss_pred cccCCCCCCcceEEEccccccccccCCCcccccccccC-------------CCCcceEeeCcEEEEccCCeEEEEecCCC
Q 004977 518 YKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVD-------------ERGMCWFYTGDIGQVYPDGCLEIIDRKKD 584 (721)
Q Consensus 518 ~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~-------------~~g~gw~~TGDlg~~d~dG~l~i~GR~~d 584 (721)
.+ +.|+.|||+|+||+++.|||++++.|++.|... .++.|||+|||+|+++ ||+|+|+||+||
T Consensus 412 ~~---~~ge~GEl~v~gp~v~~GY~~~~~~t~~~f~~~~~~~~~~~~~~~~~~~~gw~~TGDlg~~~-dG~l~i~GR~~d 487 (631)
T PRK07769 412 EL---PDGQIGEIWLHGNNIGTGYWGKPEETAATFQNILKSRLSESHAEGAPDDALWVRTGDYGVYF-DGELYITGRVKD 487 (631)
T ss_pred CC---CCCCEEEEEecCCCccccccCChhHHHHHHhhhcccccccccccCcccCCCeeeccccccEE-CCEEEEEccccc
Confidence 54 488999999999999999999999999998420 0134899999999995 999999999999
Q ss_pred eEEcCCeeeeechHHHHHHhc-Ccccce--EEEEecCC-------------------C---ceEEEEEEcChHHHHHHHH
Q 004977 585 IVKLQHGEYISLGKVEAALIS-SDYVDN--IMIHADPF-------------------H---NYCVALVVPSHKALEKWAH 639 (721)
Q Consensus 585 ~ik~~~G~~v~p~eIE~~l~~-~p~V~~--~~V~g~~~-------------------~---~~~~a~vv~~~~~~~~~~~ 639 (721)
+||+ +|++|+|.|||++|.+ ||.|.+ ++|++.++ + +.++|+|++.++..
T Consensus 488 ~Ik~-~G~~V~p~eIE~~l~~~~p~v~~~~~av~~v~d~~~~~~~~~~~~~~~~~~~~~~ge~~~a~v~~~~~~~----- 561 (631)
T PRK07769 488 LVII-DGRNHYPQDLEYTAQEATKALRTGYVAAFSVPANQLPQVVFDDSHAGLKFDPEDTSEQLVIVAERAPGAH----- 561 (631)
T ss_pred EEEE-CCeeeCHHHHHHHHHhccccccCCcEEEEEecccccccccccccccccccccCCCCccEEEEEEecCccc-----
Confidence 9997 6999999999999986 899998 99999887 2 24888888765310
Q ss_pred HhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCC-ccc-ccEEEeeCC--CCCCCCCccCcccccChHHHHHHHHH
Q 004977 640 EASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDK-FEI-PAKIKLMPE--PWTPEAGLVTAALKIKREQLKAKFKD 714 (721)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~-~~~-P~~i~~~~~--~~~p~~~~~t~~gKi~R~~l~~~~~~ 714 (721)
. .-.++|.++++ ++|+. |++ |+.+++++. + | +|++|||+|++|++.|.+
T Consensus 562 ----~---------------~~~~~l~~~~~-~~l~~~~~~~p~~~~~v~~~~l--P----~t~~GKi~r~~l~~~~~~ 614 (631)
T PRK07769 562 ----K---------------LDPQPIADDIR-AAIAVRHGVTVRDVLLVPAGSI--P----RTSSGKIARRACRAAYLD 614 (631)
T ss_pred ----c---------------ccHHHHHHHHH-HHHHHHcCCCccEEEEECCCcc--c----cCCCcHHHHHHHHHHHHc
Confidence 0 00256777777 67774 664 888998873 4 6 999999999999998764
No 42
>PRK09274 peptide synthase; Provisional
Probab=100.00 E-value=1.4e-67 Score=598.26 Aligned_cols=522 Identities=21% Similarity=0.236 Sum_probs=394.3
Q ss_pred CCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEE
Q 004977 82 STMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAIL 161 (721)
Q Consensus 82 ~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~ 161 (721)
.|+.++|++.++++|+++|+++.+ +. .......++++||+||.++++++|++|.+.|+++||+|+++
T Consensus 6 ~~~~~~l~~~a~~~p~~~a~~~~~-----------~~--~~~~~~~~~~~Ty~~l~~~~~~~A~~L~~~g~~~gd~V~~~ 72 (552)
T PRK09274 6 ANIARHLPRAAQERPDQLAVAVPG-----------GR--GADGKLAYDELSFAELDARSDAIAHGLNAAGIGRGMRAVLM 72 (552)
T ss_pred hhHHHHHHHHHHhCCCcceEEecc-----------CC--CCccccccCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEE
Confidence 578899999999999999998631 11 00001223479999999999999999999999999999999
Q ss_pred ccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccc--hhHHHhhhhcCCCccEEEEecCCCCCc
Q 004977 162 AETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQ--LKKLSAVSSSLKTIKNVIYFENDGSEK 239 (721)
Q Consensus 162 ~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~--~~~~~~~~~~~~~~~~ii~~~~~~~~~ 239 (721)
++|+++++++++||+++|++++|++|.++.+++.+++++++++++|++++. ...+... ..+..+.++.++...
T Consensus 73 ~~n~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~--~~~~~~~~i~~~~~~--- 147 (552)
T PRK09274 73 VTPSLEFFALTFALFKAGAVPVLVDPGMGIKNLKQCLAEAQPDAFIGIPKAHLARRLFGW--GKPSVRRLVTVGGRL--- 147 (552)
T ss_pred eCCcHHHHHHHHHHHHcCeEEEEcCCCccHHHHHHHHHhcCCCEEEeccHHHHHHHHhcc--Cccchhheecccccc---
Confidence 999999999999999999999999999999999999999999999997531 1222111 112233333332210
Q ss_pred cCCccCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHHHHHHHhhCCCCCCCcE
Q 004977 240 DSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNPGRSDV 319 (721)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~d~ 319 (721)
......++++...............++++++|+|||||||.||||++||+++.+.+......+ ++.++|+
T Consensus 148 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~-~~~~~~~ 217 (552)
T PRK09274 148 ---------LWGGTTLATLLRDGAAAPFPMADLAPDDMAAILFTSGSTGTPKGVVYTHGMFEAQIEALREDY-GIEPGEI 217 (552)
T ss_pred ---------ccCCccHHHhcccCccccCCCCCCCCCCeEEEEECCCCCCCCceEEecHHHHHHHHHHHHHHh-CCCCCce
Confidence 001123444432211122222345678999999999999999999999999999988888887 8999999
Q ss_pred EEeccChHHHHHHHHHHHHHHhcceEeeCccccccccchhhccCccCcceeecceEEeechHHHHHHHHHHHHHHHhhcc
Q 004977 320 YLAYLPLAHVLELAAESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKGG 399 (721)
Q Consensus 320 ~l~~~pl~h~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~ 399 (721)
.++.+|++|.++ +..|+++++.+..... .....+..++..++++++|+++++|++++.|.+.....
T Consensus 218 ~~~~~pl~~~~~-------~~~g~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~------ 283 (552)
T PRK09274 218 DLPTFPLFALFG-------PALGMTSVIPDMDPTR-PATVDPAKLFAAIERYGVTNLFGSPALLERLGRYGEAN------ 283 (552)
T ss_pred eeeccCHHHhhh-------hhhCCeEEecCccccc-ccccCHHHHHHHHHHcCCeEEeccHHHHHHHHHHhhhc------
Confidence 999999998654 3457777763211000 00001233445599999999999999999987642210
Q ss_pred hhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHHHHHHHhh--CCcccccc
Q 004977 400 LTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICM--GAPIGQAY 477 (721)
Q Consensus 400 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~~~~~~--g~~l~~~Y 477 (721)
....+++|.+++||+++++++.+.+.+.+ |+++++.|
T Consensus 284 -----------------------------------------~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~Y 322 (552)
T PRK09274 284 -----------------------------------------GIKLPSLRRVISAGAPVPIAVIERFRAMLPPDAEILTPY 322 (552)
T ss_pred -----------------------------------------CCCCchhhEEEecCCcCCHHHHHHHHHHcCCCceEEccc
Confidence 01225899999999999999999999988 46999999
Q ss_pred ccccccccccccCCC----------CCCCCccCCCcCcceEEEEecCCCC-----cccCCCCCCcceEEEcccccccccc
Q 004977 478 GLTETCAGSTFSEWD----------DPSVGRVGPPVPCCYIKLVSWDEGG-----YKTSDKPMPRGEIVVGGFNVTAGYF 542 (721)
Q Consensus 478 G~TE~~~~~~~~~~~----------~~~~~~vG~p~p~~~v~i~d~~~~~-----~~~~~~~g~~GEl~v~g~~v~~gY~ 542 (721)
|+||++.+++..... .....++|+|+|+++++|+|+.++. ....++.|+.|||+|+|++++.|||
T Consensus 323 G~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~ivd~~~~~~~~~~~~~~~~~g~~Gel~v~g~~~~~GY~ 402 (552)
T PRK09274 323 GATEALPISSIESREILFATRAATDNGAGICVGRPVDGVEVRIIAISDAPIPEWDDALRLATGEIGEIVVAGPMVTRSYY 402 (552)
T ss_pred cccccceeEeecchhhhccccccccCCCCcccCccCCCceEEEEeccccccccccccccCCCCCeeEEEEecCccccccc
Confidence 999998765543211 1122479999999999999943211 0112568899999999999999999
Q ss_pred CCCcccccccccCCCCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcccceEEEEecCCCc-
Q 004977 543 NNPGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYVDNIMIHADPFHN- 621 (721)
Q Consensus 543 ~~~~~t~~~f~~~~~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~~- 621 (721)
++|+.|...|..+.+|..||+|||+|++|+||+|+|+||.||+||+ +|++|+|.|||++|.+||+|.+|+|++.+++.
T Consensus 403 ~~~~~t~~~~~~~~~g~~w~~TGDlg~~d~dG~l~~~GR~~d~i~~-~G~~v~p~eIE~~l~~~p~V~~~~v~~~~~~~~ 481 (552)
T PRK09274 403 NRPEATRLAKIPDGQGDVWHRMGDLGYLDAQGRLWFCGRKAHRVET-AGGTLYTIPCERIFNTHPGVKRSALVGVGVPGA 481 (552)
T ss_pred CChHHhhhhhcccCCCCcEEEcCCEEEEccCCcEEEEeccCCeEEE-CCEEECcHHHHHHHHhCcccceeEEEEeCCCCC
Confidence 9999999887533442239999999999999999999999999997 59999999999999999999999999987653
Q ss_pred -eEEEEEEcChHHHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCCCCCCCCccC--
Q 004977 622 -YCVALVVPSHKALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEPWTPEAGLVT-- 698 (721)
Q Consensus 622 -~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~~~p~~~~~t-- 698 (721)
.++++|++.++.. . ..+++.++++++++ .++.++.|+.+++++++ | +|
T Consensus 482 ~~~~~~v~~~~~~~----------~-----------~~~~l~~~l~~~l~--~~~~~~~~~~~~~~~~l--P----~t~~ 532 (552)
T PRK09274 482 QRPVLCVELEPGVA----------C-----------SKSALYQELRALAA--AHPHTAGIERFLIHPSF--P----VDIR 532 (552)
T ss_pred ceEEEEEEccCccc----------c-----------chHHHhhhhHHHHH--hcCCCcceeEEeccCCC--C----cccc
Confidence 5888888775420 0 01224466766665 44677889999999987 6 77
Q ss_pred cccccChHHHHHHHHHHH
Q 004977 699 AALKIKREQLKAKFKDDL 716 (721)
Q Consensus 699 ~~gKi~R~~l~~~~~~~i 716 (721)
++|||+|++|++++.+.+
T Consensus 533 ~~GKi~r~~L~~~~~~~~ 550 (552)
T PRK09274 533 HNAKIFREKLAVWAAKQL 550 (552)
T ss_pred ccccccHHHHHHHHHHhh
Confidence 799999999999988764
No 43
>PLN02574 4-coumarate--CoA ligase-like
Probab=100.00 E-value=7.4e-68 Score=600.57 Aligned_cols=500 Identities=26% Similarity=0.343 Sum_probs=392.9
Q ss_pred HHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHh-CCCCCCCEEEEEcc
Q 004977 85 AALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVN-FGHNVDTRAAILAE 163 (721)
Q Consensus 85 ~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~-~Gv~~gd~V~i~~~ 163 (721)
..+|.+ +++|+++|+++.. .+ ..+||+||.++++++|++|.+ .|+++||+|+|+++
T Consensus 44 ~~l~~~--~~~~~~~a~~~~~----------~~-----------~~~Ty~el~~~~~~lA~~L~~~~G~~~gd~V~i~~~ 100 (560)
T PLN02574 44 SFIFSH--HNHNGDTALIDSS----------TG-----------FSISYSELQPLVKSMAAGLYHVMGVRQGDVVLLLLP 100 (560)
T ss_pred HHHhcC--cccCCCCEEEECC----------CC-----------CcccHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECC
Confidence 344544 6799999998521 12 258999999999999999999 99999999999999
Q ss_pred CcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccchhHHHhhhhcCCCccEEEEecCCCCCccCCc
Q 004977 164 TCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEKDSGV 243 (721)
Q Consensus 164 n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~ 243 (721)
|+++|++++|||+++|++++|++|.++.+++.+++++++++++|++.+..+.+... ... ++.++......
T Consensus 101 n~~~~~~~~la~~~~G~v~v~l~p~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~-----~~~-~~~~~~~~~~~---- 170 (560)
T PLN02574 101 NSVYFPVIFLAVLSLGGIVTTMNPSSSLGEIKKRVVDCSVGLAFTSPENVEKLSPL-----GVP-VIGVPENYDFD---- 170 (560)
T ss_pred CcchHHHHHHHHHHhCeEEeCcCcccCHHHHHHHHHhcCCEEEEECHHHHHHHHhc-----CCc-EEecCcccccc----
Confidence 99999999999999999999999999999999999999999999998776655432 111 22221110000
Q ss_pred cCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHHHHHHHhh----CCCCCCCcE
Q 004977 244 SGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTL----IPNPGRSDV 319 (721)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~----~~~~~~~d~ 319 (721)
. .......++++...... ........++++++|+|||||||.||||++||+++.+.+..+... +.....+++
T Consensus 171 -~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (560)
T PLN02574 171 -S--KRIEFPKFYELIKEDFD-FVPKPVIKQDDVAAIMYSSGTTGASKGVVLTHRNLIAMVELFVRFEASQYEYPGSDNV 246 (560)
T ss_pred -c--CccCcccHHHHhhcCCc-ccccCCCCcCCEEEEEcCCCccCCCcEEEEeHHHHHHHHHHHHhccccccccCCCCcE
Confidence 0 00112345555443221 112233467899999999999999999999999999887766432 212346789
Q ss_pred EEeccChHHHHHHHH-HHHHHHhcceEeeCccccccccchhhccCccCcceeecceEEeechHHHHHHHHHHHHHHHhhc
Q 004977 320 YLAYLPLAHVLELAA-ESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKG 398 (721)
Q Consensus 320 ~l~~~pl~h~~g~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~ 398 (721)
+++.+|++|.+++.. .+.++..|+++++.+... ...++..++++++|++.++|+++..|.+....
T Consensus 247 ~l~~~pl~h~~g~~~~~~~~l~~G~~~v~~~~~~--------~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~------ 312 (560)
T PLN02574 247 YLAALPMFHIYGLSLFVVGLLSLGSTIVVMRRFD--------ASDMVKVIDRFKVTHFPVVPPILMALTKKAKG------ 312 (560)
T ss_pred EEEecchHHHHHHHHHHHHHHhcCCEEEEecCCC--------HHHHHHHHHHcCCeEEecCCHHHHHHHhCccc------
Confidence 999999999999866 456678899988843221 11233339999999999999999998763110
Q ss_pred chhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHHHHHHHhh-CCcccccc
Q 004977 399 GLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICM-GAPIGQAY 477 (721)
Q Consensus 399 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~~~~~~-g~~l~~~Y 477 (721)
......+++|.+++||+++++++.+.+.+.+ ++++++.|
T Consensus 313 ----------------------------------------~~~~~~~~lr~~~~gg~~l~~~~~~~~~~~~~~~~v~~~Y 352 (560)
T PLN02574 313 ----------------------------------------VCGEVLKSLKQVSCGAAPLSGKFIQDFVQTLPHVDFIQGY 352 (560)
T ss_pred ----------------------------------------cccCccccceEEEEecccCCHHHHHHHHHHCCCCcEEecc
Confidence 0001125899999999999999988888776 78999999
Q ss_pred ccccccccccccCC--CCCCCCccCCCcCcceEEEEecCCCCcccCCCCCCcceEEEccccccccccCCCcccccccccC
Q 004977 478 GLTETCAGSTFSEW--DDPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVD 555 (721)
Q Consensus 478 G~TE~~~~~~~~~~--~~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~ 555 (721)
|+||++.+++.... .....+++|+|+|+++++|+|++++..+ ++|+.|||+|+|++++.||+++++.|.+.|.
T Consensus 353 G~tE~~~~~~~~~~~~~~~~~~~vG~~~~~~~v~i~d~~~g~~~---~~g~~Gei~v~g~~~~~GY~~~~~~t~~~~~-- 427 (560)
T PLN02574 353 GMTESTAVGTRGFNTEKLSKYSSVGLLAPNMQAKVVDWSTGCLL---PPGNCGELWIQGPGVMKGYLNNPKATQSTID-- 427 (560)
T ss_pred cccccCceeecCCCccccCCCCceeeeCCCcEEEEEeCCCCcCC---CCCCCeEEEEECcchhhhhcCChhHhhhhcc--
Confidence 99999866543221 1234589999999999999997777654 4789999999999999999999999999886
Q ss_pred CCCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcccceEEEEecCCC---ceEEEEEEcChH
Q 004977 556 ERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYVDNIMIHADPFH---NYCVALVVPSHK 632 (721)
Q Consensus 556 ~~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~~a~vv~~~~ 632 (721)
.+ |||+|||+|++|+||+++|+||+||+||+ +|++|+|.|||++|.+||+|.+++|++.+++ +.++++|++.++
T Consensus 428 ~~--g~~~TGDlg~~~~~G~l~i~GR~~d~i~~-~G~~v~~~eiE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~~ 504 (560)
T PLN02574 428 KD--GWLRTGDIAYFDEDGYLYIVDRLKEIIKY-KGFQIAPADLEAVLISHPEIIDAAVTAVPDKECGEIPVAFVVRRQG 504 (560)
T ss_pred CC--CCcccceEEEEECCCeEEEEecchhheEE-CCEEECHHHHHHHHHhCCCcceEEEEccccCCCCcceEEEEEeCCC
Confidence 56 89999999999999999999999999997 5999999999999999999999999998765 358889887643
Q ss_pred HHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCCCCCCCCccCcccccChHHHHHHH
Q 004977 633 ALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEPWTPEAGLVTAALKIKREQLKAKF 712 (721)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~~~p~~~~~t~~gKi~R~~l~~~~ 712 (721)
. ..+ .++|+++++ ++|++|++|+.+++++++ | +|++||++|+.|++.+
T Consensus 505 ~--------~~~-----------------~~~l~~~~~-~~l~~~~~p~~v~~v~~i--P----~t~~GKi~r~~L~~~~ 552 (560)
T PLN02574 505 S--------TLS-----------------QEAVINYVA-KQVAPYKKVRKVVFVQSI--P----KSPAGKILRRELKRSL 552 (560)
T ss_pred C--------CCC-----------------HHHHHHHHH-HhccCcccCcEEEEeecc--C----CCCcchhhHHHHHHHH
Confidence 2 000 257788888 889999999999999988 6 9999999999999988
Q ss_pred HHH
Q 004977 713 KDD 715 (721)
Q Consensus 713 ~~~ 715 (721)
.+.
T Consensus 553 ~~~ 555 (560)
T PLN02574 553 TNS 555 (560)
T ss_pred hhc
Confidence 653
No 44
>PRK05852 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.5e-67 Score=595.44 Aligned_cols=508 Identities=23% Similarity=0.292 Sum_probs=396.2
Q ss_pred CCCCCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCCCEE
Q 004977 79 KGASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRA 158 (721)
Q Consensus 79 ~~~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V 158 (721)
++..|+.++|+++++++|+++|+++. ++. +.+||+||.++++++|++|.+.|+++||+|
T Consensus 13 ~~~~~l~~~l~~~a~~~p~~~ai~~~-----------~~~----------~~~Ty~~l~~~~~~~a~~L~~~gv~~gd~V 71 (534)
T PRK05852 13 DFGPRIADLVEVAATRLPEAPALVVT-----------ADR----------IAISYRDLARLVDDLAGQLTRSGLLPGDRV 71 (534)
T ss_pred hhcccHHHHHHHHHHhCCCCcEEEec-----------CCC----------CcccHHHHHHHHHHHHHHHHhcCCCCCCEE
Confidence 55689999999999999999999863 221 369999999999999999999999999999
Q ss_pred EEEccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccchhHHHhhhhcCCCccEEEEecCCCCC
Q 004977 159 AILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSE 238 (721)
Q Consensus 159 ~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~ 238 (721)
+|+++|+++++++++||+++|++++|+++.++.+++.++|++++++.+|++........... .......+.+......
T Consensus 72 ~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 149 (534)
T PRK05852 72 ALRMGSNAEFVVALLAASRADLVVVPLDPALPIAEQRVRSQAAGARVVLIDADGPHDRAEPT--TRWWPLTVNVGGDSGP 149 (534)
T ss_pred EEECCCcHHHHHHHHHHHHcCcEEeecCCCCCcHHHHHHHHhCCCCEEEEcCCCcchhcccc--ccccceeeeecccccc
Confidence 99999999999999999999999999999999999999999999999999865332111100 0001111111111000
Q ss_pred ccCCccCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHHHHHHHhhCCCCCCCc
Q 004977 239 KDSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNPGRSD 318 (721)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~d 318 (721)
. .......+.... .............+|.++|+|||||||.||||+++|+++...+......+ .+.++|
T Consensus 150 ~--------~~~~~~~~~~~~--~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgv~~~~~~~~~~~~~~~~~~-~~~~~d 218 (534)
T PRK05852 150 S--------GGTLSVHLDAAT--EPTPATSTPEGLRPDDAMIMFTGGTTGLPKMVPWTHANIASSVRAIITGY-RLSPRD 218 (534)
T ss_pred c--------cccccccccccc--CCCccccccCCCCCCceEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHHh-CCCCcc
Confidence 0 000000010000 00000011122357889999999999999999999999999998888888 889999
Q ss_pred EEEeccChHHHHHHHH-HHHHHHhcceEeeCccccccccchhhccCccCcceeecceEEeechHHHHHHHHHHHHHHHhh
Q 004977 319 VYLAYLPLAHVLELAA-ESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEK 397 (721)
Q Consensus 319 ~~l~~~pl~h~~g~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~ 397 (721)
++++.+|++|.+++.. ++.++..|+++++.....+ + ...++..++++++|+++++|+++..+.+.......
T Consensus 219 ~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~-~-----~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~-- 290 (534)
T PRK05852 219 ATVAVMPLYHGHGLIAALLATLASGGAVLLPARGRF-S-----AHTFWDDIKAVGATWYTAVPTIHQILLERAATEPS-- 290 (534)
T ss_pred eEEEecCcchhHHHHHHHHHHHhcCCeEEeCCCcCc-C-----HHHHHHHHHHcCCcEEEcChHHHHHHHhhcccccc--
Confidence 9999999999999876 5667888988887432111 1 11233349999999999999999998764221000
Q ss_pred cchhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHHHHHHHhhCCcccccc
Q 004977 398 GGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMGAPIGQAY 477 (721)
Q Consensus 398 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~~~~~~g~~l~~~Y 477 (721)
....+++|.++++|+++++++.+.+.+.+|+++++.|
T Consensus 291 -------------------------------------------~~~~~~lr~i~~~G~~~~~~~~~~~~~~~~~~v~~~Y 327 (534)
T PRK05852 291 -------------------------------------------GRKPAALRFIRSCSAPLTAETAQALQTEFAAPVVCAF 327 (534)
T ss_pred -------------------------------------------cccCCCeeEEEECCCCCCHHHHHHHHHHhCCChhhcc
Confidence 0012589999999999999999999999999999999
Q ss_pred ccccccccccccCCC-----C---CCCCccCCCcCcceEEEEecCCCCcccCCCCCCcceEEEccccccccccCCCcccc
Q 004977 478 GLTETCAGSTFSEWD-----D---PSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTS 549 (721)
Q Consensus 478 G~TE~~~~~~~~~~~-----~---~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~ 549 (721)
|+||++..++..... . ...+.+|+ .++++++|+| ++++.+ ++|+.|||+|+|++++.||+++++.|.
T Consensus 328 G~tE~~~~~~~~~~~~~~~~~~~~~~~g~~g~-~~g~~~~i~d-~~g~~~---~~g~~Gel~v~g~~v~~gY~~~~~~t~ 402 (534)
T PRK05852 328 GMTEATHQVTTTQIEGIGQTENPVVSTGLVGR-STGAQIRIVG-SDGLPL---PAGAVGEVWLRGTTVVRGYLGDPTITA 402 (534)
T ss_pred CccccchhhhcCCccccccccCcccccccCCC-CCCCeEEEEC-CCCCCC---CCCCceEEEEecCcccchhcCCcccch
Confidence 999998766543321 1 12234444 6999999999 556554 588999999999999999999999999
Q ss_pred cccccCCCCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcccceEEEEecCCCc---eEEEE
Q 004977 550 EVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYVDNIMIHADPFHN---YCVAL 626 (721)
Q Consensus 550 ~~f~~~~~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~~---~~~a~ 626 (721)
+.| .+ |||+|||+|++|+||++++.||+||+||+ +|++|+|.+||++|.++|+|.+|+|++.+++. .++++
T Consensus 403 ~~~---~~--g~~~TGD~~~~d~dG~l~~~gR~~d~i~~-~G~~v~~~~iE~~l~~~~~V~~~~v~g~~~~~~g~~~~~~ 476 (534)
T PRK05852 403 ANF---TD--GWLRTGDLGSLSAAGDLSIRGRIKELINR-GGEKISPERVEGVLASHPNVMEAAVFGVPDQLYGEAVAAV 476 (534)
T ss_pred hhh---cC--CCcccCceEEEeCCCcEEEEecchhhEEE-CCEEECHHHHHHHHHhCCCeeeEEEEecCCcCcCceEEEE
Confidence 998 66 89999999999999999999999999996 69999999999999999999999999998753 58888
Q ss_pred EEcChHHHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCCCCCCCCccCcccccChH
Q 004977 627 VVPSHKALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEPWTPEAGLVTAALKIKRE 706 (721)
Q Consensus 627 vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~~~p~~~~~t~~gKi~R~ 706 (721)
|++++.. ..+ .++|.++++ .+||.|++|+.|++++++ | +|++||++|+
T Consensus 477 vv~~~~~--------~~~-----------------~~~i~~~~~-~~l~~~~~P~~i~~v~~i--P----~t~~GKi~r~ 524 (534)
T PRK05852 477 IVPRESA--------PPT-----------------AEELVQFCR-ERLAAFEIPASFQEASGL--P----HTAKGSLDRR 524 (534)
T ss_pred EEECCCC--------CCC-----------------HHHHHHHHH-HhcccccCCeEEEEhhhc--C----CCCCccccHH
Confidence 8875431 000 256888888 889999999999999998 6 9999999999
Q ss_pred HHHHHHHH
Q 004977 707 QLKAKFKD 714 (721)
Q Consensus 707 ~l~~~~~~ 714 (721)
+|+++|..
T Consensus 525 ~L~~~~~~ 532 (534)
T PRK05852 525 AVAEQFGH 532 (534)
T ss_pred HHHHHhcc
Confidence 99998864
No 45
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=1.6e-68 Score=707.87 Aligned_cols=569 Identities=21% Similarity=0.263 Sum_probs=444.8
Q ss_pred CCCcccccccccCCCccceeeheeeecc----------------ceeeeehhccccccccccCCCCCCCCCCccccccCC
Q 004977 6 GSSFDSELLTEKGSGIYGIVGAAIVALL----------------IPVLLSMMVARKKKVKQRGVPVEVGGEPGYAIRNAQ 69 (721)
Q Consensus 6 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~p~~~~~~~~~~~~~~~~~~r~~~~~~~ 69 (721)
...||..+.....-+++.+...|-..++ ..+. +. |... +.+++++.+.+++.+...++
T Consensus 1491 ~~~~dL~l~v~~~~~~l~l~~~y~~~lf~~~~i~~l~~~~~~lL~~l~-~~--p~~~---~~~l~~~~~~~~~~~~~~~~ 1564 (3956)
T PRK12467 1491 TAQFDLTLDTYESSEGLQASLTYATDLFEASTIERLAGHWLNLLQGLV-AD--PERR---LGELDLLDEAERRQILEGWN 1564 (3956)
T ss_pred ccccceEEEEEecCCeEEEEEEEeCCcCCHHHHHHHHHHHHHHHHHHh-hC--ccCc---eeeccccchHHhhhhHHhhc
Confidence 3456666655444444555555544444 2212 23 7777 88899999999888776444
Q ss_pred CCccccccCCCCCCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHh
Q 004977 70 IPELVEVPWKGASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVN 149 (721)
Q Consensus 70 ~~~~~~~~~~~~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~ 149 (721)
....+.+...+++++|+++++++|+++|+++ ++. .+||+||.++++++|++|.+
T Consensus 1565 ---~~~~~~~~~~~~~~~~~~~a~~~p~~~Av~~------------~~~-----------~lTY~eL~~~a~~lA~~L~~ 1618 (3956)
T PRK12467 1565 ---ATHTGYPLARLVHQLIEDQAAATPEAVALVF------------GEQ-----------ELTYGELNRRANRLAHRLIA 1618 (3956)
T ss_pred ---CCccCCCccccHHHHHHHHHHhCCCCeEEEe------------CCc-----------EEeHHHHHHHHHHHHHHHHH
Confidence 1223334457999999999999999999986 332 69999999999999999999
Q ss_pred CCCCCCCEEEEEccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccchhHHHhhhhcCCCccEE
Q 004977 150 FGHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNV 229 (721)
Q Consensus 150 ~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~i 229 (721)
+|+++|++|+|+++|++++++++|||+++|+++||++|.++.+++.+++++++++++|++......+.. ....+ +
T Consensus 1619 ~Gv~~~~~V~l~~~~s~~~vv~~lavlkaG~~~vpldp~~p~~rl~~il~~~~~~~~l~~~~~~~~~~~----~~~~~-~ 1693 (3956)
T PRK12467 1619 LGVGPEVLVGIAVERSLEMVVGLLAILKAGGAYVPLDPEYPRERLAYMIEDSGIELLLTQSHLQARLPL----PDGLR-S 1693 (3956)
T ss_pred cCCCCCCEEEEEccCCHHHHHHHHHhhccCceeeecCCCCCHHHHHHHHHhCCCCEEEeChhhhhhCcc----ccCCc-E
Confidence 999999999999999999999999999999999999999999999999999999999998765433211 11111 2
Q ss_pred EEecCCCCCccCCccCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHHHHHHHh
Q 004977 230 IYFENDGSEKDSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKT 309 (721)
Q Consensus 230 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~ 309 (721)
+.++... ++.. ......+.....++++|||+|||||||.||||+++|+++++.+.+...
T Consensus 1694 ~~~~~~~--------------------~~~~-~~~~~~~~~~~~~~~~ayiiyTSGSTG~PKGV~~th~~l~~~~~~~~~ 1752 (3956)
T PRK12467 1694 LVLDQED--------------------DWLE-GYSDSNPAVNLAPQNLAYVIYTSGSTGRPKGAGNRHGALVNRLCATQE 1752 (3956)
T ss_pred EEecccc--------------------chhc-cCCCCCCCCCCCCcCcEEEEECCCcCCCCCEEEEcCHHHHHHHHHHHH
Confidence 2222110 0000 001111223456899999999999999999999999999999999888
Q ss_pred hCCCCCCCcEEEeccChHHHHHHHHHHHHHHhcceEeeCccccccccchhhccCccCcceeecceEEeechHHHHHHHHH
Q 004977 310 LIPNPGRSDVYLAYLPLAHVLELAAESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREG 389 (721)
Q Consensus 310 ~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~ 389 (721)
.+ +++++|+++++.|++|+++++.++.+|+.|+++++.++....+. ..+...++++++|++.++|++++.|.+.
T Consensus 1753 ~~-~~~~~d~~l~~~~~~fd~~~~~~~~~L~~G~~lvi~~~~~~~~~-----~~l~~~i~~~~vt~~~~~Ps~~~~l~~~ 1826 (3956)
T PRK12467 1753 AY-QLSAADVVLQFTSFAFDVSVWELFWPLINGARLVIAPPGAHRDP-----EQLIQLIERQQVTTLHFVPSMLQQLLQM 1826 (3956)
T ss_pred hc-CCCcccEEEEecCccHHHHHHHHHHHHhCCCEEEEcChhhcCCH-----HHHHHHHHHcCCeEEECCHHHHHHHHhh
Confidence 88 89999999999999999999889999999999999654433222 2233449999999999999999988753
Q ss_pred HHHHHHhhcchhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHHHHHHHhh
Q 004977 390 VVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICM 469 (721)
Q Consensus 390 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~~~~~~ 469 (721)
... . ...++||.+++||+++++++.+.|.+.+
T Consensus 1827 ~~~-~-----------------------------------------------~~~~~lr~v~~gGe~l~~~~~~~~~~~~ 1858 (3956)
T PRK12467 1827 DEQ-V-----------------------------------------------EHPLSLRRVVCGGEALEVEALRPWLERL 1858 (3956)
T ss_pred ccc-c-----------------------------------------------ccCCCceEEEEccccCCHHHHHHHHHhC
Confidence 100 0 0114899999999999999988877665
Q ss_pred -CCccccccccccccccccccCCC-----CCCCCccCCCcCcceEEEEecCCCCcccCCCCCCcceEEEccccccccccC
Q 004977 470 -GAPIGQAYGLTETCAGSTFSEWD-----DPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFN 543 (721)
Q Consensus 470 -g~~l~~~YG~TE~~~~~~~~~~~-----~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~ 543 (721)
+..++|+||+||++..++..... .....++|+|++|++++|+| ++++. +++|..|||+|+|+++++||+|
T Consensus 1859 ~~~~l~n~YG~TE~t~~~t~~~~~~~~~~~~~~~~iG~p~~~~~~~vld-~~~~~---vp~G~~GEl~i~G~~v~~GYl~ 1934 (3956)
T PRK12467 1859 PDTGLFNLYGPTETAVDVTHWTCRRKDLEGRDSVPIGQPIANLSTYILD-ASLNP---VPIGVAGELYLGGVGLARGYLN 1934 (3956)
T ss_pred CCCeEEeCccCCcCEEeEEEEeccccccccCCCCCcccccCCCEEEEEC-CCCCC---CCCCCceEEEeccccccccccC
Confidence 57899999999999877654322 12246899999999999998 56655 4588999999999999999999
Q ss_pred CCcccccccccCCC---CcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcccceEEEEecCC-
Q 004977 544 NPGKTSEVYKVDER---GMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYVDNIMIHADPF- 619 (721)
Q Consensus 544 ~~~~t~~~f~~~~~---g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~- 619 (721)
+|+.|+++|..++. |.+||+|||+|++++||.|+|+||+||+||++ |+||+|.|||++|.+||+|.+|+|++.++
T Consensus 1935 ~p~~t~~~f~~~p~~~~~~r~yrTGDl~~~~~dG~l~~~GR~D~qVki~-G~rIel~eIE~~l~~~p~V~~a~vv~~~~~ 2013 (3956)
T PRK12467 1935 RPALTAERFVADPFGTVGSRLYRTGDLARYRADGVIEYLGRIDHQVKIR-GFRIELGEIEARLREQGGVREAVVIAQDGA 2013 (3956)
T ss_pred ChhhhhhhCcCCCCCCCCccceeccceEEECCCCCEEEecccCceEEeC-eEEechHHHHHHHHhCCCcceEEEEEecCC
Confidence 99999999974332 45799999999999999999999999999985 99999999999999999999999998763
Q ss_pred -CceEEEEEEcChHHHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCCCCCCCCccC
Q 004977 620 -HNYCVALVVPSHKALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEPWTPEAGLVT 698 (721)
Q Consensus 620 -~~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~~~p~~~~~t 698 (721)
.+.++|+|++..+... . ..+......++|+++++ .+||.||+|+.+++++++ | +|
T Consensus 2014 ~~~~lva~vv~~~~~~~--------~---------~~~~~~~~~~~l~~~l~-~~Lp~ymvP~~~~~l~~l--P----~t 2069 (3956)
T PRK12467 2014 NGKQLVAYVVPTDPGLV--------D---------DDEAQVALRAILKNHLK-ASLPEYMVPAHLVFLARM--P----LT 2069 (3956)
T ss_pred CCcEEEEEEEecCcccc--------c---------ccccccccHHHHHHHHH-hhCchhhCchhhhhhhcC--C----CC
Confidence 3579999998653210 0 00011123467888998 899999999999999988 6 99
Q ss_pred cccccChHHHHHHHHHH
Q 004977 699 AALKIKREQLKAKFKDD 715 (721)
Q Consensus 699 ~~gKi~R~~l~~~~~~~ 715 (721)
++|||||++|.+.+...
T Consensus 2070 ~~GKidr~~L~~~~~~~ 2086 (3956)
T PRK12467 2070 PNGKLDRKALPAPDASE 2086 (3956)
T ss_pred CCCCcchhhCCCCcccc
Confidence 99999999998755443
No 46
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=100.00 E-value=1.3e-67 Score=613.86 Aligned_cols=492 Identities=19% Similarity=0.248 Sum_probs=382.1
Q ss_pred CCCCHHHHHHHHHHhCCC-CCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCCCEE
Q 004977 80 GASTMAALFEQSCKSHPQ-DRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRA 158 (721)
Q Consensus 80 ~~~tl~~~~~~~a~~~pd-~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V 158 (721)
...|+.++|.++++++|+ ++|+.. .+ ++++||+||.++++++|++|.+. +++||+|
T Consensus 202 ~~~t~~~~l~~~~~~~p~~~~a~~~------------~~----------~~~~Ty~el~~~~~~lA~~L~~~-~~~gd~V 258 (718)
T PRK08043 202 PRETLYEALLSAQYRYGAGKPCIED------------VN----------FTPDSYRKLLKKTLFVGRILEKY-SVEGERI 258 (718)
T ss_pred CCCCHHHHHHHHHHHhCCCCcceEc------------CC----------CCcccHHHHHHHHHHHHHHHHHh-cCCCceE
Confidence 357899999999999998 577752 11 13699999999999999999987 5999999
Q ss_pred EEEccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccchhHHH--hhhhcCCCccEEEEecCCC
Q 004977 159 AILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLS--AVSSSLKTIKNVIYFENDG 236 (721)
Q Consensus 159 ~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~--~~~~~~~~~~~ii~~~~~~ 236 (721)
+|+++|++||++++|||+++|++++|+|+.++++++.+++++++++++|++.+..+... .....++.+..+ .+++..
T Consensus 259 al~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~~l~~s~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~ 337 (718)
T PRK08043 259 GLMLPNATISAAVIFGASLRRRIPAMMNYTAGVKGLTSAITAAEIKTIFTSRQFLDKGKLWHLPEQLTQVRWV-YLEDLK 337 (718)
T ss_pred EEEcCCcHHHHHHHHHHHHcCCcccccccCcCHHHHHHHHHHcCCcEEEEcHHHHhhccCCChhhhhccccEE-Ehhhhh
Confidence 99999999999999999999999999999999999999999999999999877543211 111112222222 222110
Q ss_pred CCccCCccCCCCCceEeeHHH--HH-hcCCCCCCCCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHHHHHHHhhCCC
Q 004977 237 SEKDSGVSGGISNWTVSSFSE--VE-KLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPN 313 (721)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~ 313 (721)
. . ..+.+ .. ..............++|+++|+|||||||.||||++||+|+.+.+......+ +
T Consensus 338 ~-~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~~~~~~-~ 402 (718)
T PRK08043 338 D-D-------------VTTADKLWIFAHLLMPRLAQVKQQPEDAALILFTSGSEGHPKGVVHSHKSLLANVEQIKTIA-D 402 (718)
T ss_pred h-h-------------cchhHHHHHHHHHhCCccccCCCCCCCeEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhh-C
Confidence 0 0 00111 00 0000001111234679999999999999999999999999999988887777 8
Q ss_pred CCCCcEEEeccChHHHHHHHH-HHHHHHhcceEeeCcc-ccccccchhhccCccCcceeecceEEeechHHHHHHHHHHH
Q 004977 314 PGRSDVYLAYLPLAHVLELAA-ESIMLCAGCAIGYGST-LTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVV 391 (721)
Q Consensus 314 ~~~~d~~l~~~pl~h~~g~~~-~~~~l~~G~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~ 391 (721)
++++|++++.+|++|.+++.. .+.++..|+++++.+. ... ..+...+.++++|+++++|+++..+.+..
T Consensus 403 ~~~~d~~l~~~Pl~h~~g~~~~~~~~l~~G~~vv~~~~~~~~--------~~~~~~i~~~~vt~~~~~p~~~~~l~~~~- 473 (718)
T PRK08043 403 FTPNDRFMSALPLFHSFGLTVGLFTPLLTGAEVFLYPSPLHY--------RIVPELVYDRNCTVLFGTSTFLGNYARFA- 473 (718)
T ss_pred CCccCeEEEcCcchhhhhhHHHHHHHHHcCCEEEEeCCcccH--------HHHHHHHHhcCCeEEEchHHHHHHhhhhc-
Confidence 899999999999999999865 6778999999987432 111 11122388999999999999987664310
Q ss_pred HHHHhhcchhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHHHHHHHhhCC
Q 004977 392 KKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMGA 471 (721)
Q Consensus 392 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~~~~~~g~ 471 (721)
.....++||.+++||+++++++.+.+++.+|+
T Consensus 474 ------------------------------------------------~~~~~~~lr~i~~gg~~l~~~~~~~~~~~~g~ 505 (718)
T PRK08043 474 ------------------------------------------------NPYDFARLRYVVAGAEKLQESTKQLWQDKFGL 505 (718)
T ss_pred ------------------------------------------------CcccccceEEEEEeCccCCHHHHHHHHHHcCC
Confidence 00012589999999999999999999988999
Q ss_pred ccccccccccccccccccCCCCCCCCccCCCcCcceEEEEecCCCCcccCCCCCCcceEEEccccccccccC--CCccc-
Q 004977 472 PIGQAYGLTETCAGSTFSEWDDPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFN--NPGKT- 548 (721)
Q Consensus 472 ~l~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~--~~~~t- 548 (721)
+++++||+||++.+++...+.....+++|+|+||++++|+|. ++ .++.|||+++|++++.|||+ +++.+
T Consensus 506 ~l~~~YG~TE~~~~~~~~~~~~~~~~svG~p~pg~~~~i~d~-~~-------~~~~Gel~v~g~~v~~GY~~~e~~~~~~ 577 (718)
T PRK08043 506 RILEGYGVTECAPVVSINVPMAAKPGTVGRILPGMDARLLSV-PG-------IEQGGRLQLKGPNIMNGYLRVEKPGVLE 577 (718)
T ss_pred CeecccCcccccceEEecCCcccCCCCCCCcCCCCeeEEecC-CC-------CCCceEEEEecCCccccccCCCCccccc
Confidence 999999999998776655444445689999999999999983 32 23569999999999999998 45432
Q ss_pred ------ccccccCCCCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcccceEEEEecCCCc-
Q 004977 549 ------SEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYVDNIMIHADPFHN- 621 (721)
Q Consensus 549 ------~~~f~~~~~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~~- 621 (721)
.+.+. .+ |||+|||+|++|+||+++|+||+||+||+ +|++|+|.|||+++.+|+.+.+++|++.+++.
T Consensus 578 ~~~~~~~~~~~--~~--gw~~TGDlg~~d~dG~l~i~GR~~d~I~~-~G~~V~p~eIE~~l~~~~~~~~~avv~~~~~~~ 652 (718)
T PRK08043 578 VPTAENARGEM--ER--GWYDTGDIVRFDEQGFVQIQGRAKRFAKI-AGEMVSLEMVEQLALGVSPDKQHATAIKSDASK 652 (718)
T ss_pred ccccccccccc--cC--CeEecCCEEEEcCCCcEEEEecCCCeeEe-CcEEcCHHHHHHHHHhCCccceEEEEEccCCCC
Confidence 22221 34 89999999999999999999999999997 59999999999999999988888899887654
Q ss_pred --eEEEEEEcChHHHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCCCCCCCCccCc
Q 004977 622 --YCVALVVPSHKALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEPWTPEAGLVTA 699 (721)
Q Consensus 622 --~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~~~p~~~~~t~ 699 (721)
.+++++.... . + .+++++++++..|+.|++|+.+++++++ | +|+
T Consensus 653 ge~~v~~~~~~~-~----------~-----------------~~~l~~~~~~~~l~~~~vP~~i~~v~~l--P----~t~ 698 (718)
T PRK08043 653 GEALVLFTTDSE-L----------T-----------------REKLQQYAREHGVPELAVPRDIRYLKQL--P----LLG 698 (718)
T ss_pred CceEEEEEcCcc-c----------C-----------------HHHHHHHHHhcCCCcccCCceEEEeccc--C----cCC
Confidence 4666653211 0 0 2568888883449999999999999998 6 999
Q ss_pred ccccChHHHHHHHHH
Q 004977 700 ALKIKREQLKAKFKD 714 (721)
Q Consensus 700 ~gKi~R~~l~~~~~~ 714 (721)
+||++|++|++++.+
T Consensus 699 ~GKi~r~~L~~~~~~ 713 (718)
T PRK08043 699 SGKPDFVTLKSMVDE 713 (718)
T ss_pred CCCcCHHHHHHHHhc
Confidence 999999999988765
No 47
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=1.2e-68 Score=715.35 Aligned_cols=527 Identities=21% Similarity=0.274 Sum_probs=428.0
Q ss_pred cccccccccCCCCCCCCCCccccccCCCCccccccCCCCCCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCcccee
Q 004977 43 ARKKKVKQRGVPVEVGGEPGYAIRNAQIPELVEVPWKGASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEK 122 (721)
Q Consensus 43 p~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~ 122 (721)
|... +..++++...+++.+...++ ....+++...+++++|+++++++||++|+.+. ++
T Consensus 3687 ~~~~---~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~p~~~Av~~~-----------~~----- 3744 (4334)
T PRK05691 3687 FHGD---LSELPLLGEQERDFLLDGCN---RSERDYPLEQSYVRLFEAQVAAHPQRIAASCL-----------DQ----- 3744 (4334)
T ss_pred cCCC---hhhcCCCCHHHHHHHHHhhC---CccCCCccccCHHHHHHHHHHhCCCceEEEcC-----------CC-----
Confidence 6666 88899988888776665444 22344455679999999999999999999863 33
Q ss_pred ccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcC
Q 004977 123 LHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQ 202 (721)
Q Consensus 123 ~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~ 202 (721)
.+||+||+++++++|++|.+.|+++|++|+|++++++++++++|||+++|+++|||+|.++.+++.+++++++
T Consensus 3745 -------~~tY~eL~~~~~~la~~L~~~gv~~~~~V~v~~~~s~~~~v~~lavlkaG~a~vpld~~~p~~r~~~il~~~~ 3817 (4334)
T PRK05691 3745 -------QWSYAELNRAANRLGHALRAAGVGVDQPVALLAERGLDLLGMIVGSFKAGAGYLPLDPGLPAQRLQRIIELSR 3817 (4334)
T ss_pred -------cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHhhCcEEeCCCCCChHHHHHHHHHhcC
Confidence 4999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEECccchhHHHhhhhcCCCc--cEEEEecCCCCCccCCccCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEE
Q 004977 203 VTTLICDSKQLKKLSAVSSSLKTI--KNVIYFENDGSEKDSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVI 280 (721)
Q Consensus 203 ~~~vi~~~~~~~~~~~~~~~~~~~--~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i 280 (721)
+++++++.........+...+... ..++..+ +................++++|||
T Consensus 3818 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~ayv 3874 (4334)
T PRK05691 3818 TPVLVCSAACREQARALLDELGCANRPRLLVWE-----------------------EVQAGEVASHNPGIYSGPDNLAYV 3874 (4334)
T ss_pred CCEEEecCcccchhhhhhcccccccccceeeec-----------------------ccccccccccCCCCCCCCCceEEE
Confidence 999999987655444333222211 1111111 111101111112234578999999
Q ss_pred EeccCCCCCcchheeccHHHHHHHHHHHhhCCCCCCCcEEEeccChHHHHHHHHHHHHHHhcceEeeCccccccccchhh
Q 004977 281 MYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNPGRSDVYLAYLPLAHVLELAAESIMLCAGCAIGYGSTLTMTDTSSKI 360 (721)
Q Consensus 281 ~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~~ 360 (721)
+|||||||.||||+++|+|+++.+.+....+ .++++|++++..|++|+.+++.++.+|+.|+++++.+.....+.
T Consensus 3875 i~TSGSTG~PKGV~~~h~~~~~~~~~~~~~~-~~~~~~~~~~~~s~~fd~s~~~~~~~l~~G~~l~i~~~~~~~~~---- 3949 (4334)
T PRK05691 3875 IYTSGSTGLPKGVMVEQRGMLNNQLSKVPYL-ALSEADVIAQTASQSFDISVWQFLAAPLFGARVEIVPNAIAHDP---- 3949 (4334)
T ss_pred EECCCCCCCCCEEEeehHHHHHHHHHHHHhc-CCCccceEEEecCCchhHHHHHHHHHHhCCCEEEEcCccccCCH----
Confidence 9999999999999999999999999988888 99999999999999999999999999999999998554333222
Q ss_pred ccCccCcceeecceEEeechHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHH
Q 004977 361 KKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVR 440 (721)
Q Consensus 361 ~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (721)
..+...++++++|++.++|++++.+......
T Consensus 3950 -~~l~~~~~~~~vt~~~~~Ps~~~~l~~~~~~------------------------------------------------ 3980 (4334)
T PRK05691 3950 -QGLLAHVQAQGITVLESVPSLIQGMLAEDRQ------------------------------------------------ 3980 (4334)
T ss_pred -HHHHHHHHHcCCeEEEeCHHHHHHHHhhccc------------------------------------------------
Confidence 2233349999999999999999987642100
Q ss_pred HHhCCcEEEEEecCCCCCHHHHHHHHHh-hCCccccccccccccccccccCCCC----CCCCccCCCcCcceEEEEecCC
Q 004977 441 AVLGGRIRFMICGGAPLSADSQRFINIC-MGAPIGQAYGLTETCAGSTFSEWDD----PSVGRVGPPVPCCYIKLVSWDE 515 (721)
Q Consensus 441 ~~~~~~lr~v~~gG~~l~~~~~~~~~~~-~g~~l~~~YG~TE~~~~~~~~~~~~----~~~~~vG~p~p~~~v~i~d~~~ 515 (721)
..++||.+++|||++++++.+.|.+. .+++++|.||+|||+..+++..... ....++|+|++|+.++|+| +.
T Consensus 3981 --~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~t~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d-~~ 4057 (4334)
T PRK05691 3981 --ALDGLRWMLPTGEAMPPELARQWLQRYPQIGLVNAYGPAECSDDVAFFRVDLASTRGSYLPIGSPTDNNRLYLLD-EA 4057 (4334)
T ss_pred --cCCCceEEEecCCcCCHHHHHHHHHhCCCCeEEeCccCccceeEEEEEEcccccccCCcCCCCCccCCCEEEEEC-CC
Confidence 01489999999999999998887665 4789999999999998776544322 1235799999999999998 55
Q ss_pred CCcccCCCCCCcceEEEccccccccccCCCcccccccccCC---CCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCee
Q 004977 516 GGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVDE---RGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGE 592 (721)
Q Consensus 516 ~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~~---~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~ 592 (721)
+..+ +.|.+|||+|+|+++++||+|+|+.|+++|..++ +|.+||+|||+|++++||.|+|+||+|++||++ |+
T Consensus 4058 ~~~~---p~g~~GEL~i~G~~v~~GY~~~~~~t~~~f~~~p~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~qvki~-G~ 4133 (4334)
T PRK05691 4058 LELV---PLGAVGELCVAGTGVGRGYVGDPLRTALAFVPHPFGAPGERLYRTGDLARRRSDGVLEYVGRIDHQVKIR-GY 4133 (4334)
T ss_pred CCCC---CCCCceEEEEecccccccccCCcccchhhcccCCCCCCCceeeccCcceeecCCCcEEEecccCCcEEec-eE
Confidence 6554 5899999999999999999999999999997533 356899999999999999999999999999995 99
Q ss_pred eeechHHHHHHhcCcccceEEEEecC--CCceEEEEEEcChHHHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHH
Q 004977 593 YISLGKVEAALISSDYVDNIMIHADP--FHNYCVALVVPSHKALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAK 670 (721)
Q Consensus 593 ~v~p~eIE~~l~~~p~V~~~~V~g~~--~~~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 670 (721)
||++.|||++|.++|+|.+|+|+... ..+.++|+|++...... .....++|+++++
T Consensus 4134 riel~eIE~~l~~~~~v~~a~v~~~~~~~~~~l~a~~~~~~~~~~----------------------~~~~~~~l~~~l~ 4191 (4334)
T PRK05691 4134 RIELGEIEARLHEQAEVREAAVAVQEGVNGKHLVGYLVPHQTVLA----------------------QGALLERIKQRLR 4191 (4334)
T ss_pred EecHHHHHHHHHhCCCccEEEEEEecCCCCcEEEEEEeCCccccc----------------------chHHHHHHHHHHH
Confidence 99999999999999999999887543 23579999998653210 0123467888888
Q ss_pred HCCCCCcccccEEEeeCCCCCCCCCccCcccccChHHHHHH
Q 004977 671 AAKLDKFEIPAKIKLMPEPWTPEAGLVTAALKIKREQLKAK 711 (721)
Q Consensus 671 ~~~L~~~~~P~~i~~~~~~~~p~~~~~t~~gKi~R~~l~~~ 711 (721)
.+||.||+|+.++.++++ | +|++|||||++|.+.
T Consensus 4192 -~~Lp~ymvP~~~~~~~~l--P----~t~~GKidr~~L~~~ 4225 (4334)
T PRK05691 4192 -AELPDYMVPLHWLWLDRL--P----LNANGKLDRKALPAL 4225 (4334)
T ss_pred -hhCChhhcCcceeecccC--C----CCCCCcccHhhcCCC
Confidence 899999999999999988 6 999999999999764
No 48
>PLN03102 acyl-activating enzyme; Provisional
Probab=100.00 E-value=1.1e-66 Score=592.29 Aligned_cols=517 Identities=23% Similarity=0.294 Sum_probs=394.0
Q ss_pred CCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEE
Q 004977 82 STMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAIL 161 (721)
Q Consensus 82 ~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~ 161 (721)
.|+.++|++.++++|+++|+++ ++. .+||+||.++++++|++|.++|+++||+|+|+
T Consensus 14 ~~~~~~l~~~~~~~p~~~Al~~------------~~~-----------~~Ty~eL~~~~~~~a~~L~~~Gl~~gd~Vai~ 70 (579)
T PLN03102 14 LTPITFLKRASECYPNRTSIIY------------GKT-----------RFTWPQTYDRCCRLAASLISLNITKNDVVSVL 70 (579)
T ss_pred ccHHHHHHHHHHhCCCCeEEEE------------CCc-----------EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEE
Confidence 5799999999999999999986 333 69999999999999999999999999999999
Q ss_pred ccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccchhHHHhhhhcCCC-----ccEEEEecCCC
Q 004977 162 AETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKT-----IKNVIYFENDG 236 (721)
Q Consensus 162 ~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~-----~~~ii~~~~~~ 236 (721)
++|+++|++++|||+++|++++|+++.++.+++.++|+.++++++|++++..+.+.++...++. ...++.++...
T Consensus 71 ~~n~~e~~~~~la~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (579)
T PLN03102 71 APNTPAMYEMHFAVPMAGAVLNPINTRLDATSIAAILRHAKPKILFVDRSFEPLAREVLHLLSSEDSNLNLPVIFIHEID 150 (579)
T ss_pred cCCcHHHHHHHHHHHhcCcEEeeccccCCHHHHHHHHhccCCeEEEEChhhHHHHHHHHhhccccccccCceEEEecccc
Confidence 9999999999999999999999999999999999999999999999998877766655443322 11234443221
Q ss_pred CCccCCccCCCCCceEeeHHHHHhcCCCCCCC----CCCCCCCCeEEEEeccCCCCCcchheeccHHHHHHHHHHHhhCC
Q 004977 237 SEKDSGVSGGISNWTVSSFSEVEKLGKRSPVD----PSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIP 312 (721)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~ 312 (721)
... .......+++++.......... .....++++++|+|||||||.||||+++|+++..........+
T Consensus 151 ~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~- 222 (579)
T PLN03102 151 FPK-------RPSSEELDYECLIQRGEPTPSLVARMFRIQDEHDPISLNYTSGTTADPKGVVISHRGAYLSTLSAIIGW- 222 (579)
T ss_pred ccc-------CCcccccCHHHHHhccCCCCcccccccccCCCCCcEEEEeCCcCCCCCCEEEEecHHHHHHHHHHHhhc-
Confidence 110 0011223455555433221111 1224578999999999999999999999999765544444444
Q ss_pred CCCCCcEEEeccChHHHHHHHHHHHHHHhcceEeeCccccccccchhhccCccCcceeecceEEeechHHHHHHHHHHHH
Q 004977 313 NPGRSDVYLAYLPLAHVLELAAESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVK 392 (721)
Q Consensus 313 ~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~ 392 (721)
.+...++++..+|++|.+++...+.++..|+++++..... ...++..|+++++|++.++|+++..|.+....
T Consensus 223 ~~~~~~~~l~~~pl~h~~g~~~~~~~~~~g~~~v~~~~~~--------~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~ 294 (579)
T PLN03102 223 EMGTCPVYLWTLPMFHCNGWTFTWGTAARGGTSVCMRHVT--------APEIYKNIEMHNVTHMCCVPTVFNILLKGNSL 294 (579)
T ss_pred CCCCCCeEEecCChhhhcchhHHHHHHHhcCcEEeeccCC--------hHHHHHHHHHcCCeEEEeChHHHHHHHhCccc
Confidence 6677889999999999999887777888899887743211 11133349999999999999999998763110
Q ss_pred HHHhhcchhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHHHHHHHhhCCc
Q 004977 393 KVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMGAP 472 (721)
Q Consensus 393 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~~~~~~g~~ 472 (721)
... ..++++.+++||+++++.+.++++. +|++
T Consensus 295 ~~~-----------------------------------------------~~~~~~~~~~gg~~~~~~~~~~~~~-~g~~ 326 (579)
T PLN03102 295 DLS-----------------------------------------------PRSGPVHVLTGGSPPPAALVKKVQR-LGFQ 326 (579)
T ss_pred ccC-----------------------------------------------CcccceEEEECCCCCCHHHHHHHHH-cCCe
Confidence 000 0135778999999999999988876 5999
Q ss_pred cccccccccccccccccCCCC--------------CCCCccCCCcCcceEEEEecCCCCcccCCCCCCcceEEEcccccc
Q 004977 473 IGQAYGLTETCAGSTFSEWDD--------------PSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVT 538 (721)
Q Consensus 473 l~~~YG~TE~~~~~~~~~~~~--------------~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~ 538 (721)
+++.||+||+++.++...... ...+..+.|+++ +.++|.+.+..++ .+.++.|||+|+|++++
T Consensus 327 i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--v~i~~~~~~~~v~-~~~~~~GEl~v~g~~~~ 403 (579)
T PLN03102 327 VMHAYGLTEATGPVLFCEWQDEWNRLPENQQMELKARQGVSILGLAD--VDVKNKETQESVP-RDGKTMGEIVIKGSSIM 403 (579)
T ss_pred EEeecCccccCccccccccccccccCCcccccccccCCCcccccccc--eEEeccccccccC-CCCCCceEEEEECcchh
Confidence 999999999986543321100 112334445554 5556644444443 22246799999999999
Q ss_pred ccccCCCcccccccccCCCCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcccceEEEEecC
Q 004977 539 AGYFNNPGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYVDNIMIHADP 618 (721)
Q Consensus 539 ~gY~~~~~~t~~~f~~~~~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~ 618 (721)
.|||++|+.|.+.| .+ |||+|||+|++|+||+|+|+||.||+||+ +|++|+|.|||++|.+||.|.+++|++.+
T Consensus 404 ~GY~~~~~~t~~~f---~~--gw~~TGDlg~~d~dG~l~i~GR~~d~i~~-~G~~v~p~eIE~~l~~~p~V~~a~vv~~~ 477 (579)
T PLN03102 404 KGYLKNPKATSEAF---KH--GWLNTGDVGVIHPDGHVEIKDRSKDIIIS-GGENISSVEVENVLYKYPKVLETAVVAMP 477 (579)
T ss_pred hhhcCChhhhHhhh---cc--CceecCceEEEcCCCeEEEEeccCcEEEE-CCEEECHHHHHHHHHhCCCcceeEEEecc
Confidence 99999999999999 66 89999999999999999999999999996 69999999999999999999999999998
Q ss_pred CC---ceEEEEEEcChHHHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCCCCCCCC
Q 004977 619 FH---NYCVALVVPSHKALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEPWTPEAG 695 (721)
Q Consensus 619 ~~---~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~~~p~~~ 695 (721)
++ +.++|+|++.++.... .+...+ ... -..+++++++ .+|++|++|..+++++++ |
T Consensus 478 ~~~~~~~~~a~v~~~~~~~~~--------~~~~~~------~~~-~~~~l~~~~~-~~L~~~~~P~~i~~~~~~--P--- 536 (579)
T PLN03102 478 HPTWGETPCAFVVLEKGETTK--------EDRVDK------LVT-RERDLIEYCR-ENLPHFMCPRKVVFLQEL--P--- 536 (579)
T ss_pred CccccceeEEEEEecCccccc--------cccccc------ccc-cHHHHHHHHH-hhcccccCCeEEEEcccC--C---
Confidence 75 3689999877542100 000000 000 0257888888 889999999999999988 6
Q ss_pred ccCcccccChHHHHHHHHHHH
Q 004977 696 LVTAALKIKREQLKAKFKDDL 716 (721)
Q Consensus 696 ~~t~~gKi~R~~l~~~~~~~i 716 (721)
+|++||++|++|++++++.+
T Consensus 537 -~t~~gKi~r~~L~~~~~~~~ 556 (579)
T PLN03102 537 -KNGNGKILKPKLRDIAKGLV 556 (579)
T ss_pred -CCCcccccHHHHHHHHHHhh
Confidence 99999999999999987644
No 49
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=100.00 E-value=3.1e-68 Score=661.38 Aligned_cols=519 Identities=20% Similarity=0.263 Sum_probs=418.0
Q ss_pred cccccccccCCCCCCCCCCccccccCCCCccccccCCCCCCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCcccee
Q 004977 43 ARKKKVKQRGVPVEVGGEPGYAIRNAQIPELVEVPWKGASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEK 122 (721)
Q Consensus 43 p~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~ 122 (721)
|..+ +.+++++...+++.+..++. ...+++. .|+.++|+++++++|+++|+++ ++.
T Consensus 427 p~~~---i~~~~~~~~~~~~~~~~~~~----~~~~~~~-~~l~~~~~~~~~~~p~~~Al~~------------~~~---- 482 (1296)
T PRK10252 427 PALL---CGDVDILLPGEYAQLAQVNA----TAVEIPE-TTLSALVAQQAAKTPDAPALAD------------ARY---- 482 (1296)
T ss_pred CCCC---hhhcCCCCHHHHHHHHHhcC----CCCCCCc-CCHHHHHHHHHHhCCCCeEEEc------------CCC----
Confidence 6666 78888888777766433333 2233343 6899999999999999999985 222
Q ss_pred ccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcC
Q 004977 123 LHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQ 202 (721)
Q Consensus 123 ~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~ 202 (721)
.+||+||.++++++|+.|.+.|+++|++|+|+++|+++++++++||+++|++++|++|.++.+++.+++++++
T Consensus 483 -------~~Ty~eL~~~~~~la~~L~~~g~~~g~~V~l~~~~~~~~i~~~la~~~~G~~~vpld~~~p~~~~~~~l~~~~ 555 (1296)
T PRK10252 483 -------QFSYREMREQVVALANLLRERGVKPGDSVAVALPRSVFLTLALHAIVEAGAAWLPLDTGYPDDRLKMMLEDAR 555 (1296)
T ss_pred -------cEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEEecCccCHHHHHHHHHHhCC
Confidence 5999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEECccchhHHHhhhhcCCCccEEEEecCCCCCccCCccCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEe
Q 004977 203 VTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEKDSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMY 282 (721)
Q Consensus 203 ~~~vi~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~ 282 (721)
++++|++.+....+.. .+.+.. +. +++.... ..........++++|+|+|
T Consensus 556 ~~~~i~~~~~~~~~~~----~~~~~~-~~-----------------------~~~~~~~--~~~~~~~~~~~~~~a~i~~ 605 (1296)
T PRK10252 556 PSLLITTADQLPRFAD----VPDLTS-LC-----------------------YNAPLAP--QGAAPLQLSQPHHTAYIIF 605 (1296)
T ss_pred CCEEEECcchhhhccc----CCCcee-ee-----------------------ccccccc--ccCCCCCCCCCCCeEEEEE
Confidence 9999999876543321 111111 11 1110000 0001112236789999999
Q ss_pred ccCCCCCcchheeccHHHHHHHHHHHhhCCCCCCCcEEEeccChHHHHHHHHHHHHHHhcceEeeCccccccccchhhcc
Q 004977 283 TSGSTGLPKGVMITHGNIVATAAAIKTLIPNPGRSDVYLAYLPLAHVLELAAESIMLCAGCAIGYGSTLTMTDTSSKIKK 362 (721)
Q Consensus 283 TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~ 362 (721)
||||||.||||+++|+++++.+.+....+ ++.++|++++..|++|..++..++.+|..|+++++.++....+. .
T Consensus 606 TSGSTG~PKgV~~~h~~l~~~~~~~~~~~-~~~~~d~~l~~~~~~fd~~~~~~~~~l~~G~~l~~~~~~~~~~~-----~ 679 (1296)
T PRK10252 606 TSGSTGRPKGVMVGQTAIVNRLLWMQNHY-PLTADDVVLQKTPCSFDVSVWEFFWPFIAGAKLVMAEPEAHRDP-----L 679 (1296)
T ss_pred CCCCCCCCCEEEeccHHHHHHHHHHHHhc-CCCCCCEEEEeCCcchhhhHHHHHHHHhCCCEEEECChhccCCH-----H
Confidence 99999999999999999999999998888 99999999999999999999889999999999999654433332 2
Q ss_pred CccCcceeecceEEeechHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHH
Q 004977 363 GTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAV 442 (721)
Q Consensus 363 ~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (721)
.+...++++++|++.++|+++..+.+....... ..
T Consensus 680 ~~~~~i~~~~vt~~~~~Ps~l~~l~~~~~~~~~---------------------------------------------~~ 714 (1296)
T PRK10252 680 AMQQFFAEYGVTTTHFVPSMLAAFVASLTPEGA---------------------------------------------RQ 714 (1296)
T ss_pred HHHHHHHHcCCeEEEeCHHHHHHHHhhhccccc---------------------------------------------cc
Confidence 233348999999999999999988753211000 00
Q ss_pred hCCcEEEEEecCCCCCHHHHHHHHHhhCCccccccccccccccccccCCCC-------CCCCccCCCcCcceEEEEecCC
Q 004977 443 LGGRIRFMICGGAPLSADSQRFINICMGAPIGQAYGLTETCAGSTFSEWDD-------PSVGRVGPPVPCCYIKLVSWDE 515 (721)
Q Consensus 443 ~~~~lr~v~~gG~~l~~~~~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~~-------~~~~~vG~p~p~~~v~i~d~~~ 515 (721)
..+++|.+++||+++++++.+.+.+.+|++++|.||+||++..++...... ....++|+|+++++++|+| ++
T Consensus 715 ~~~~lr~i~~gGe~l~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d-~~ 793 (1296)
T PRK10252 715 SCASLRQVFCSGEALPADLCREWQQLTGAPLHNLYGPTEAAVDVSWYPAFGEELAAVRGSSVPIGYPVWNTGLRILD-AR 793 (1296)
T ss_pred cCCCccEEEEecCCCCHHHHHHHHhcCCCEEEeCCCcchhhheeeeeecccccccccCCCCCCcccccCCCEEEEEC-CC
Confidence 114899999999999999999998888999999999999987766543321 2346899999999999999 66
Q ss_pred CCcccCCCCCCcceEEEccccccccccCCCcccccccccCC--CCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeee
Q 004977 516 GGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVDE--RGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEY 593 (721)
Q Consensus 516 ~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~~--~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~ 593 (721)
++.+ ++|+.|||+|+|+++++||+++|+.|++.|..++ ++.+||+|||+|++++||.|+|+||+||+||+ +|++
T Consensus 794 ~~~~---~~g~~Gel~i~g~~~~~GY~~~~~~t~~~f~~~~~~~~~~~y~TGDl~~~~~~G~l~~~GR~d~~ik~-~G~r 869 (1296)
T PRK10252 794 MRPV---PPGVAGDLYLTGIQLAQGYLGRPDLTASRFIADPFAPGERMYRTGDVARWLDDGAVEYLGRSDDQLKI-RGQR 869 (1296)
T ss_pred CCCC---CCCCceEEEecccccchhhCCCcccchhhcccCCCCCCCEEEecCceEEEcCCCcEEEecccCCeEEE-eeEE
Confidence 6654 5889999999999999999999999999997432 24579999999999999999999999999998 5999
Q ss_pred eechHHHHHHhcCcccceEEEEecC---------CCceEEEEEEcChHHHHHHHHHhCCCcccHHHHhccHHHHHHHHHH
Q 004977 594 ISLGKVEAALISSDYVDNIMIHADP---------FHNYCVALVVPSHKALEKWAHEASIKYEDLSELCNKAEAVNEVQQA 664 (721)
Q Consensus 594 v~p~eIE~~l~~~p~V~~~~V~g~~---------~~~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 664 (721)
|+|.|||++|.+||+|.+++|++.. +...++|+|++..+. ..+ .++
T Consensus 870 i~~~eIE~~l~~~~~v~~a~v~~~~~~~~~~~~~~~~~lva~v~~~~~~----------~~~---------------~~~ 924 (1296)
T PRK10252 870 IELGEIDRAMQALPDVEQAVTHACVINQAAATGGDARQLVGYLVSQSGL----------PLD---------------TSA 924 (1296)
T ss_pred ecHHHHHHHHHhCccccceEEEEEeccccccCCCCccEEEEEEEcCCCC----------CCC---------------HHH
Confidence 9999999999999999999876531 123699999976431 000 256
Q ss_pred HHHHHHHCCCCCcccccEEEeeCCCCCCCCCccCcccccChHHHHH
Q 004977 665 LSKVAKAAKLDKFEIPAKIKLMPEPWTPEAGLVTAALKIKREQLKA 710 (721)
Q Consensus 665 l~~~~~~~~L~~~~~P~~i~~~~~~~~p~~~~~t~~gKi~R~~l~~ 710 (721)
|+++++ .+||.||+|..++.++++ | +|++|||+|++|++
T Consensus 925 l~~~l~-~~Lp~~~~P~~~~~~~~l--P----~t~~GKidr~~L~~ 963 (1296)
T PRK10252 925 LQAQLR-ERLPPHMVPVVLLQLDQL--P----LSANGKLDRKALPL 963 (1296)
T ss_pred HHHHHH-hhCchhcCCcEEEEecCC--C----CCCCcChhHHhcCC
Confidence 888888 899999999999999988 6 99999999999965
No 50
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=100.00 E-value=1.1e-66 Score=588.38 Aligned_cols=498 Identities=23% Similarity=0.304 Sum_probs=404.3
Q ss_pred CCCCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEE
Q 004977 80 GASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAA 159 (721)
Q Consensus 80 ~~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~ 159 (721)
...|+.++|+++++++|+++|++. ++. .+||+||.+++.++|..|.+.|+++|++|+
T Consensus 19 ~~~~l~~~l~~~a~~~p~~~a~~~------------~~~-----------~~Ty~el~~~v~~la~~L~~~gi~~g~~V~ 75 (542)
T PRK06155 19 SERTLPAMLARQAERYPDRPLLVF------------GGT-----------RWTYAEAARAAAAAAHALAAAGVKRGDRVA 75 (542)
T ss_pred cccCHHHHHHHHHHHCCCCeEEEe------------CCc-----------cccHHHHHHHHHHHHHHHHHcCCCCCCEEE
Confidence 347899999999999999999985 332 699999999999999999999999999999
Q ss_pred EEccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccchhHHHhhhhcCCCccEEEEecCCCCCc
Q 004977 160 ILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEK 239 (721)
Q Consensus 160 i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~ 239 (721)
++++|+++|+++++||+++|++++|+++.++.+++.++++++++++++++.+....+.......+.++.++.++......
T Consensus 76 v~~~n~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (542)
T PRK06155 76 LMCGNRIEFLDVFLGCAWLGAIAVPINTALRGPQLEHILRNSGARLLVVEAALLAALEAADPGDLPLPAVWLLDAPASVS 155 (542)
T ss_pred EECCCChHHHHHHHHHHHhCCEEEEeccccCHHHHHHHHHhcCceEEEEChhhHHHHHHhcccccCcceEEEecCccccc
Confidence 99999999999999999999999999999999999999999999999999888777666544444455666655432100
Q ss_pred cCCccCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHHHHHHHhhCCCCCCCcE
Q 004977 240 DSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNPGRSDV 319 (721)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~d~ 319 (721)
....+.. .++.. ...........++++++|+|||||||.||||+++|+++.+........+ .+.++++
T Consensus 156 ------~~~~~~~---~~~~~--~~~~~~~~~~~~~~~a~il~TSGTTG~PK~V~~t~~~~~~~~~~~~~~~-~~~~~~~ 223 (542)
T PRK06155 156 ------VPAGWST---APLPP--LDAPAPAAAVQPGDTAAILYTSGTTGPSKGVCCPHAQFYWWGRNSAEDL-EIGADDV 223 (542)
T ss_pred ------cccccch---hhhcc--cCCCCCCCCCCCCCeEEEEECCCCCCCCcEEEEEHHHHHHHHHHHHHhc-CCCCCCE
Confidence 0000100 01111 1111112334678999999999999999999999999998887777777 8999999
Q ss_pred EEeccChHHHHHHHHHHHHHHhcceEeeCccccccccchhhccCccCcceeecceEEeechHHHHHHHHHHHHHHHhhcc
Q 004977 320 YLAYLPLAHVLELAAESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKGG 399 (721)
Q Consensus 320 ~l~~~pl~h~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~ 399 (721)
+++.+|++|.+++...+.++..|+++++.+... +..++..++++++|++.++|+++..|.+.....
T Consensus 224 ~l~~~pl~~~~~~~~~~~~l~~G~~~~~~~~~~--------~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~------ 289 (542)
T PRK06155 224 LYTTLPLFHTNALNAFFQALLAGATYVLEPRFS--------ASGFWPAVRRHGATVTYLLGAMVSILLSQPARE------ 289 (542)
T ss_pred EEEecCHHHHHHHHHHHHHHHcCceEEeeCCCC--------HHHHHHHHHHhCCcEEEchHHHHHHHHcCcCcc------
Confidence 999999999999988888899999998843221 122333399999999999999998876531100
Q ss_pred hhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHHHHHHHhhCCcccccccc
Q 004977 400 LTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMGAPIGQAYGL 479 (721)
Q Consensus 400 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~~~~~~g~~l~~~YG~ 479 (721)
....+++|.++.|| +++++.+.+.+.+|+++++.||+
T Consensus 290 -----------------------------------------~~~~~~l~~~~~g~--~~~~~~~~~~~~~~~~v~~~YG~ 326 (542)
T PRK06155 290 -----------------------------------------SDRAHRVRVALGPG--VPAALHAAFRERFGVDLLDGYGS 326 (542)
T ss_pred -----------------------------------------ccccCceEEEEEcC--CCHHHHHHHHHHcCCCEEeeecc
Confidence 00124788887666 57888888888899999999999
Q ss_pred ccccccccccCCCCCCCCccCCCcCcceEEEEecCCCCcccCCCCCCcceEEEccc---cccccccCCCcccccccccCC
Q 004977 480 TETCAGSTFSEWDDPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGF---NVTAGYFNNPGKTSEVYKVDE 556 (721)
Q Consensus 480 TE~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~---~v~~gY~~~~~~t~~~f~~~~ 556 (721)
||++.++.... .....+++|.|.++++++|+| +++..+ +.|+.|||+++|+ +++.||+++++.|.+.| .
T Consensus 327 tE~~~~~~~~~-~~~~~~~vG~~~~~~~~~i~d-~~~~~~---~~g~~Gei~v~~~~~~~~~~GY~~~~~~~~~~~---~ 398 (542)
T PRK06155 327 TETNFVIAVTH-GSQRPGSMGRLAPGFEARVVD-EHDQEL---PDGEPGELLLRADEPFAFATGYFGMPEKTVEAW---R 398 (542)
T ss_pred cccCccccCCC-CCCCCCCcCccCCCceEEEEC-CCCCCC---CCCCceEEEEecCCccccchhhcCCHHHHHHhh---c
Confidence 99988766533 234568999999999999998 556554 4788999999998 69999999999999988 6
Q ss_pred CCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcccceEEEEecCCC---ceEEEEEEcChHH
Q 004977 557 RGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYVDNIMIHADPFH---NYCVALVVPSHKA 633 (721)
Q Consensus 557 ~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~~a~vv~~~~~ 633 (721)
+ +||+|||+|++++||+++|+||.||+||+ +|++|+|.+||++|.+||+|.+|+|++.+++ ..+.+++++..+.
T Consensus 399 ~--~~~~TGD~~~~~~dG~l~i~GR~~d~i~~-~G~~v~p~eIE~~l~~~~~V~~~~v~~v~~~~~~~~~~~~v~~~~~~ 475 (542)
T PRK06155 399 N--LWFHTGDRVVRDADGWFRFVDRIKDAIRR-RGENISSFEVEQVLLSHPAVAAAAVFPVPSELGEDEVMAAVVLRDGT 475 (542)
T ss_pred C--CcEeccceEEEcCCceEEEEecCCCEEEe-CCEEECHHHHHHHHHhCCCeeEEEEEeecccccCceEEEEEEECCCC
Confidence 6 89999999999999999999999999996 6999999999999999999999999998764 3577888766432
Q ss_pred HHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCCCCCCCCccCcccccChHHHHHHH
Q 004977 634 LEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEPWTPEAGLVTAALKIKREQLKAKF 712 (721)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~~~p~~~~~t~~gKi~R~~l~~~~ 712 (721)
. .+ ..+++++++ ++|+.|++|..|++++++ | +|++||++|++|++++
T Consensus 476 ~--------~~-----------------~~~~~~~~~-~~l~~~~~P~~i~~~~~i--P----~t~~GKi~r~~l~~~~ 522 (542)
T PRK06155 476 A--------LE-----------------PVALVRHCE-PRLAYFAVPRYVEFVAAL--P----KTENGKVQKFVLREQG 522 (542)
T ss_pred C--------CC-----------------HHHHHHHHH-hhCcCccCCcEEEEeccC--C----CCcccceeHHHHHhhc
Confidence 0 00 257888888 899999999999999987 6 9999999999998865
No 51
>PRK07638 acyl-CoA synthetase; Validated
Probab=100.00 E-value=8.8e-67 Score=582.72 Aligned_cols=481 Identities=20% Similarity=0.259 Sum_probs=391.1
Q ss_pred CCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEE
Q 004977 82 STMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAIL 161 (721)
Q Consensus 82 ~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~ 161 (721)
+++.+.|+++++++||++|+.+ ++. .+||.||.++++++|++|.+.|. +|++|+|+
T Consensus 1 ~~~~~~~~~~a~~~p~~~a~~~------------~~~-----------~~Ty~~l~~~~~~~a~~L~~~~~-~~~~v~i~ 56 (487)
T PRK07638 1 MGITKEYKKHASLQPNKIAIKE------------NDR-----------VLTYKDWFESVCKVANWLNEKES-KNKTIAIL 56 (487)
T ss_pred CChHHHHHHHHHhCCCCeEEec------------CCc-----------EeeHHHHHHHHHHHHHHHHHhCC-CCCEEEEE
Confidence 4688999999999999999975 333 69999999999999999999984 89999999
Q ss_pred ccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccchhHHHhhhhcCCCccEEEEecCCCCCccC
Q 004977 162 AETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEKDS 241 (721)
Q Consensus 162 ~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~ 241 (721)
++|+++++++++||+++|++++|+++.++++++.++++.++++++|++......+... . ..++.++
T Consensus 57 ~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~-----~-~~~~~~~-------- 122 (487)
T PRK07638 57 LENRIEFLQLFAGAAMAGWTCVPLDIKWKQDELKERLAISNADMIVTERYKLNDLPDE-----E-GRVIEID-------- 122 (487)
T ss_pred cCCCHHHHHHHHHHHHcCeEEEecCccCCHHHHHHHHHhCCCCEEEEecccccchhhc-----c-ceEEEeh--------
Confidence 9999999999999999999999999999999999999999999999998654433211 0 1122111
Q ss_pred CccCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHHHHHHHhhCCCCCCCcEEE
Q 004977 242 GVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNPGRSDVYL 321 (721)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~d~~l 321 (721)
.+.+....... .........+++++|+|||||||.||||+++|++++..+......+ .+.++|+++
T Consensus 123 ------------~~~~~~~~~~~-~~~~~~~~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~~~-~~~~~d~~~ 188 (487)
T PRK07638 123 ------------EWKRMIEKYLP-TYAPIENVQNAPFYMGFTSGSTGKPKAFLRAQQSWLHSFDCNVHDF-HMKREDSVL 188 (487)
T ss_pred ------------hhhhhhhhccc-cccccccCCCCcEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhc-CcCCCCEEE
Confidence 11111111111 1111222356789999999999999999999999999888877777 889999999
Q ss_pred eccChHHHHHHHHHHHHHHhcceEeeCccccccccchhhccCccCcceeecceEEeechHHHHHHHHHHHHHHHhhcchh
Q 004977 322 AYLPLAHVLELAAESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKGGLT 401 (721)
Q Consensus 322 ~~~pl~h~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~ 401 (721)
...|++|..++...+.++..|+++++.+... +..++..++++++|+++++|+++..+.+...
T Consensus 189 ~~~~l~~~~~l~~~~~~l~~g~~~~~~~~~~--------~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~---------- 250 (487)
T PRK07638 189 IAGTLVHSLFLYGAISTLYVGQTVHLMRKFI--------PNQVLDKLETENISVMYTVPTMLESLYKENR---------- 250 (487)
T ss_pred EeecchHHHHHHHHHHHHccCcEEEEcCCCC--------HHHHHHHHHHcCCeEEEeCcHHHHHHHhCcC----------
Confidence 9999999988877888899999999843211 1123333999999999999999998875200
Q ss_pred hHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHHHHHHHhh-CCccccccccc
Q 004977 402 KNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICM-GAPIGQAYGLT 480 (721)
Q Consensus 402 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~~~~~~-g~~l~~~YG~T 480 (721)
...+.+.++++|++++.++.+++...+ ++.+++.||+|
T Consensus 251 -----------------------------------------~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~~~~~~YG~t 289 (487)
T PRK07638 251 -----------------------------------------VIENKMKIISSGAKWEAEAKEKIKNIFPYAKLYEFYGAS 289 (487)
T ss_pred -----------------------------------------cCCceeEEEEcCCCCCHHHHHHHHHHcCCCeEEEEecCC
Confidence 002455678899999999999888887 78999999999
Q ss_pred cccccccccCCC-CCCCCccCCCcCcceEEEEecCCCCcccCCCCCCcceEEEccccccccccCCCcccccccccCCCCc
Q 004977 481 ETCAGSTFSEWD-DPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVDERGM 559 (721)
Q Consensus 481 E~~~~~~~~~~~-~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~~~g~ 559 (721)
|++.++...... ....+++|+|+++++++|+| ++|.. +++|+.|||+|+|+.++.||+++++.+.+.+ .+
T Consensus 290 E~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d-~~g~~---~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~---~~-- 360 (487)
T PRK07638 290 ELSFVTALVDEESERRPNSVGRPFHNVQVRICN-EAGEE---VQKGEIGTVYVKSPQFFMGYIIGGVLARELN---AD-- 360 (487)
T ss_pred ccCceEEecccccCCCCCCCCcccCCcEEEEEC-CCCCC---CCCCCCeEEEEecccceeeecCCHHHHhhhc---cC--
Confidence 999776554322 23457999999999999999 56654 4588999999999999999999998877755 56
Q ss_pred ceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcccceEEEEecCCC---ceEEEEEEcChHHHHH
Q 004977 560 CWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYVDNIMIHADPFH---NYCVALVVPSHKALEK 636 (721)
Q Consensus 560 gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~~a~vv~~~~~~~~ 636 (721)
|||+|||+|++|+||+++++||++|+||+ +|++|+|.|||+++.+||+|.+|+|++.+++ ..++++|+....
T Consensus 361 g~~~TGDl~~~d~~g~l~i~GR~~d~i~~-~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~---- 435 (487)
T PRK07638 361 GWMTVRDVGYEDEEGFIYIVGREKNMILF-GGINIFPEEIESVLHEHPAVDEIVVIGVPDSYWGEKPVAIIKGSAT---- 435 (487)
T ss_pred CcEecCccEeEcCCCeEEEEecCCCeEEe-CCEEECHHHHHHHHHhCCCeeeEEEEecCchhcCCeeEEEEECCCC----
Confidence 89999999999999999999999999997 6999999999999999999999999998865 357777764221
Q ss_pred HHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCCCCCCCCccCcccccChHHHHHHHHHHH
Q 004977 637 WAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEPWTPEAGLVTAALKIKREQLKAKFKDDL 716 (721)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~~~p~~~~~t~~gKi~R~~l~~~~~~~i 716 (721)
.++++++++ ++|++|++|+.+++++++ | +|++||++|++|++++++ +
T Consensus 436 -------------------------~~~l~~~~~-~~l~~~~~p~~i~~v~~i--P----~t~~GKv~r~~L~~~~~~-~ 482 (487)
T PRK07638 436 -------------------------KQQLKSFCL-QRLSSFKIPKEWHFVDEI--P----YTNSGKIARMEAKSWIEN-Q 482 (487)
T ss_pred -------------------------HHHHHHHHH-HHhhcccCCcEEEEeccc--C----CCCcccccHHHHHHHHhc-c
Confidence 267888888 899999999999999988 6 999999999999877654 3
Q ss_pred Hhhh
Q 004977 717 QMLY 720 (721)
Q Consensus 717 ~~~Y 720 (721)
++.|
T Consensus 483 ~~~~ 486 (487)
T PRK07638 483 EKIY 486 (487)
T ss_pred cccc
Confidence 4444
No 52
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=3.8e-68 Score=715.13 Aligned_cols=523 Identities=21% Similarity=0.259 Sum_probs=425.5
Q ss_pred cccccccccCCCCCCCCCCccccccCCCCccccccCCCCCCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCcccee
Q 004977 43 ARKKKVKQRGVPVEVGGEPGYAIRNAQIPELVEVPWKGASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEK 122 (721)
Q Consensus 43 p~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~ 122 (721)
|... +.+++++...++..+...++ .....++...+++++|+++++++|+++|+++ ++
T Consensus 478 p~~~---i~~l~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~a~~~p~~~A~~~------------~~----- 534 (5163)
T PRK12316 478 PQAR---VDELPMLDAEERGQLVEGWN---ATAAEYPLQRGVHRLFEEQVERTPEAPALAF------------GE----- 534 (5163)
T ss_pred cccc---cccCCCCCHHHHHHHHHHhc---CccccCCCCCCHHHHHHHHHHHCCCCeEEEe------------CC-----
Confidence 6677 88899988888876654433 1223334457999999999999999999985 22
Q ss_pred ccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcC
Q 004977 123 LHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQ 202 (721)
Q Consensus 123 ~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~ 202 (721)
+.+||+||.++++++|+.|.+.|+++|++|+|+++|++++++++|||+++|+++||++|.++.+++.+++++++
T Consensus 535 ------~~~TY~eL~~~~~~lA~~L~~~gv~~g~~V~l~~~~s~~~i~~~la~~~aG~~~vpld~~~p~~rl~~il~~~~ 608 (5163)
T PRK12316 535 ------ETLDYAELNRRANRLAHALIERGVGPDVLVGVAMERSIEMVVALLAILKAGGAYVPLDPEYPAERLAYMLEDSG 608 (5163)
T ss_pred ------ceEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHcCCEEeccCccCcHHHHHHHHHhCC
Confidence 26999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEECccchhHHHhhhhcCCCccEEEEecCCCCCccCCccCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEe
Q 004977 203 VTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEKDSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMY 282 (721)
Q Consensus 203 ~~~vi~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~ 282 (721)
++++|++......+.. .... .++.++... .... ............++++|+|+|
T Consensus 609 ~~~~l~~~~~~~~~~~----~~~~-~~~~~~~~~--------------------~~~~-~~~~~~~~~~~~~~~~a~ii~ 662 (5163)
T PRK12316 609 VQLLLSQSHLGRKLPL----AAGV-QVLDLDRPA--------------------AWLE-GYSEENPGTELNPENLAYVIY 662 (5163)
T ss_pred CCEEEEChhhhhhCCc----ccCc-eEEEecCcc--------------------hhhc-cCCCCCCCCCCCCCCeEEEEE
Confidence 9999998765433211 1111 122222110 0000 001111223456899999999
Q ss_pred ccCCCCCcchheeccHHHHHHHHHHHhhCCCCCCCcEEEeccChHHHHHHHHHHHHHHhcceEeeCccccccccchhhcc
Q 004977 283 TSGSTGLPKGVMITHGNIVATAAAIKTLIPNPGRSDVYLAYLPLAHVLELAAESIMLCAGCAIGYGSTLTMTDTSSKIKK 362 (721)
Q Consensus 283 TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~ 362 (721)
||||||.||||+++|+++++.+.+....+ +++++|++++.+|++|+++++.++.+|+.|+++++.++....+. .
T Consensus 663 TSGSTG~PKgV~~~h~~l~~~~~~~~~~~-~~~~~d~~l~~~p~~fd~~~~~~~~~L~~G~~l~i~~~~~~~~~-----~ 736 (5163)
T PRK12316 663 TSGSTGKPKGAGNRHRALSNRLCWMQQAY-GLGVGDTVLQKTPFSFDVSVWEFFWPLMSGARLVVAAPGDHRDP-----A 736 (5163)
T ss_pred CCCcCCCCCEeeEcCHHHHHHHHHHHHhc-CCCCCCEEEeeCCeehHHHHHHHHHHHhCCCEEEECCccccCCH-----H
Confidence 99999999999999999999999998888 89999999999999999999999999999999998544322222 2
Q ss_pred CccCcceeecceEEeechHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHH
Q 004977 363 GTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAV 442 (721)
Q Consensus 363 ~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (721)
.+...++++++|++.++|++++.|.+.... .
T Consensus 737 ~~~~~i~~~~vt~~~~~Ps~~~~l~~~~~~-------------------------------------------------~ 767 (5163)
T PRK12316 737 KLVELINREGVDTLHFVPSMLQAFLQDEDV-------------------------------------------------A 767 (5163)
T ss_pred HHHHHHHHcCCeEEEeCHHHHHHHHhcccc-------------------------------------------------c
Confidence 233348999999999999999988652100 0
Q ss_pred hCCcEEEEEecCCCCCHHHHHHHHHhh-CCccccccccccccccccccCC--CCCCCCccCCCcCcceEEEEecCCCCcc
Q 004977 443 LGGRIRFMICGGAPLSADSQRFINICM-GAPIGQAYGLTETCAGSTFSEW--DDPSVGRVGPPVPCCYIKLVSWDEGGYK 519 (721)
Q Consensus 443 ~~~~lr~v~~gG~~l~~~~~~~~~~~~-g~~l~~~YG~TE~~~~~~~~~~--~~~~~~~vG~p~p~~~v~i~d~~~~~~~ 519 (721)
..+++|.+++||+++++++.+.+...+ +++++|.||+||++..++.... ......++|+|++|++++|+| +++..
T Consensus 768 ~~~~l~~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d-~~~~~- 845 (5163)
T PRK12316 768 SCTSLRRIVCSGEALPADAQEQVFAKLPQAGLYNLYGPTEAAIDVTHWTCVEEGGDSVPIGRPIANLACYILD-ANLEP- 845 (5163)
T ss_pred cCCCccEEEEeeccCCHHHHHHHHHhCCCCeEEeCcCcChheeeeeEEecccccCCCCCCccccCCCEEEEEC-CCCCC-
Confidence 114899999999999999988876544 7899999999999865544332 223457899999999999999 55654
Q ss_pred cCCCCCCcceEEEccccccccccCCCcccccccccCC--CCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeech
Q 004977 520 TSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVDE--RGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLG 597 (721)
Q Consensus 520 ~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~~--~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~ 597 (721)
++.|+.|||+|+|+++++||+|+|+.|+++|..++ +|.+||+|||+|++++||.|+|+||+||+||+ +|+||+|.
T Consensus 846 --~p~G~~GEl~i~G~~v~~GYl~~~~~t~~~f~~~~~~~~~~~y~TGDl~~~~~dG~l~~~GR~d~~ik~-~G~rI~~~ 922 (5163)
T PRK12316 846 --VPVGVLGELYLAGRGLARGYHGRPGLTAERFVPSPFVAGERMYRTGDLARYRADGVIEYAGRIDHQVKL-RGLRIELG 922 (5163)
T ss_pred --CCCCCceEEEecccccChhhCCChhhhhhhCCCCCCCCCCeeEecCccEEECCCCCEEeecccCCEEEE-ceEEcChH
Confidence 45899999999999999999999999999996433 45589999999999999999999999999998 59999999
Q ss_pred HHHHHHhcCcccceEEEEecCCCceEEEEEEcChHHHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCc
Q 004977 598 KVEAALISSDYVDNIMIHADPFHNYCVALVVPSHKALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKF 677 (721)
Q Consensus 598 eIE~~l~~~p~V~~~~V~g~~~~~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~ 677 (721)
|||++|.+||+|.+|+|++.+ ...++|+|++.++.. ...++|+++++ ++||.|
T Consensus 923 EIE~~l~~~p~V~~a~V~~~~-~~~lva~vv~~~~~~-------------------------~~~~~l~~~l~-~~Lp~y 975 (5163)
T PRK12316 923 EIEARLLEHPWVREAAVLAVD-GKQLVGYVVLESEGG-------------------------DWREALKAHLA-ASLPEY 975 (5163)
T ss_pred HHHHHHHhCCCcceEEEEEcC-CCeEEEEEEccCCCC-------------------------CCHHHHHHHHH-hhCCCc
Confidence 999999999999999999987 678999999875320 01267888998 899999
Q ss_pred ccccEEEeeCCCCCCCCCccCcccccChHHHHHHHH
Q 004977 678 EIPAKIKLMPEPWTPEAGLVTAALKIKREQLKAKFK 713 (721)
Q Consensus 678 ~~P~~i~~~~~~~~p~~~~~t~~gKi~R~~l~~~~~ 713 (721)
|+|+.|++++++ | +|++||+||++|.+.+.
T Consensus 976 ~vP~~i~~v~~l--P----~t~~GKidr~~L~~~~~ 1005 (5163)
T PRK12316 976 MVPAQWLALERL--P----LTPNGKLDRKALPAPEA 1005 (5163)
T ss_pred cCCCeEEEHhhC--C----CCCCCChhHHhhcCccc
Confidence 999999999998 6 99999999999987644
No 53
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=2.6e-68 Score=716.73 Aligned_cols=538 Identities=20% Similarity=0.265 Sum_probs=433.3
Q ss_pred cccccccccCCCCCCCCCCccccccCCCCccccccCCCCCCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCcccee
Q 004977 43 ARKKKVKQRGVPVEVGGEPGYAIRNAQIPELVEVPWKGASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEK 122 (721)
Q Consensus 43 p~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~ 122 (721)
|... +..++++...++..+...++ ....+.+...+++++|+++++++|+++|+++ ++.
T Consensus 4518 p~~~---~~~l~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~a~~~p~~~Av~~------------~~~---- 4575 (5163)
T PRK12316 4518 PQRR---LGELQLLEKAEQQRIVALWN---RTDAGYPATRCVHQLVAERARMTPDAVAVVF------------DEE---- 4575 (5163)
T ss_pred cccc---hhhhccCCHHHHHHHHhccC---CCCcCCCccccHHHHHHHHHHhCCCCeEEEe------------CCc----
Confidence 6666 88899888877776654333 1223345567999999999999999999986 332
Q ss_pred ccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcC
Q 004977 123 LHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQ 202 (721)
Q Consensus 123 ~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~ 202 (721)
.+||+||.++++++|++|.+.|+++|++|+|+++|++++++++|||+++|+++||++|.++.+++.+++++++
T Consensus 4576 -------~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~~s~~~iv~~lavl~aG~~~vpldp~~p~~rl~~il~~~~ 4648 (5163)
T PRK12316 4576 -------KLTYAELNRRANRLAHALIARGVGPEVLVGIAMERSAEMMVGLLAVLKAGGAYVPLDPEYPRERLAYMMEDSG 4648 (5163)
T ss_pred -------eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCcEEecCCCCChHHHHHHHHHhcC
Confidence 6999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEECccchhHHHhhhhcCCCccEEEEecCCCCCccCCccCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEe
Q 004977 203 VTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEKDSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMY 282 (721)
Q Consensus 203 ~~~vi~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~ 282 (721)
++++|++......+.. ...+. ++.++.. .++ .......+.....++++|+|+|
T Consensus 4649 ~~~vl~~~~~~~~~~~----~~~~~-~~~~~~~--------------------~~~--~~~~~~~~~~~~~~~~~a~ii~ 4701 (5163)
T PRK12316 4649 AALLLTQSHLLQRLPI----PDGLA-SLALDRD--------------------EDW--EGFPAHDPAVRLHPDNLAYVIY 4701 (5163)
T ss_pred CCEEEechhhhhhccc----ccCcc-eEeecch--------------------hhc--ccCCccCCccCCCCCceEEEEE
Confidence 9999998765443211 11111 1111110 000 0001111223456899999999
Q ss_pred ccCCCCCcchheeccHHHHHHHHHHHhhCCCCCCCcEEEeccChHHHHHHHHHHHHHHhcceEeeCccccccccchhhcc
Q 004977 283 TSGSTGLPKGVMITHGNIVATAAAIKTLIPNPGRSDVYLAYLPLAHVLELAAESIMLCAGCAIGYGSTLTMTDTSSKIKK 362 (721)
Q Consensus 283 TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~ 362 (721)
||||||.||||+++|+++++.+.+....+ +++++|++++++|++|+.++..++.+|+.|+++++.+.... + +.
T Consensus 4702 TSGSTG~PKgV~~~h~~l~~~~~~~~~~~-~~~~~d~~l~~~~~~fd~~~~~~~~~L~~G~~lvi~~~~~~-~-----~~ 4774 (5163)
T PRK12316 4702 TSGSTGRPKGVAVSHGSLVNHLHATGERY-ELTPDDRVLQFMSFSFDGSHEGLYHPLINGASVVIRDDSLW-D-----PE 4774 (5163)
T ss_pred CCCCCCCCCEeeeccHHHHHHHHHHHHhc-CCCcCCeEEEecCcchhhHHHHHHHHHhCCCEEEEcCcccC-C-----HH
Confidence 99999999999999999999999988888 89999999999999999999889999999999999554322 2 12
Q ss_pred CccCcceeecceEEeechHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHH
Q 004977 363 GTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAV 442 (721)
Q Consensus 363 ~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (721)
.+...++++++|+++++|++++.+.+..... .
T Consensus 4775 ~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~------------------------------------------------~ 4806 (5163)
T PRK12316 4775 RLYAEIHEHRVTVLVFPPVYLQQLAEHAERD------------------------------------------------G 4806 (5163)
T ss_pred HHHHHHHHcCCEEEEcCHHHHHHHHhhhccc------------------------------------------------c
Confidence 2334499999999999999999987632110 0
Q ss_pred hCCcEEEEEecCCCCCHHHHHHHHHh-hCCccccccccccccccccccCCCC-----CCCCccCCCcCcceEEEEecCCC
Q 004977 443 LGGRIRFMICGGAPLSADSQRFINIC-MGAPIGQAYGLTETCAGSTFSEWDD-----PSVGRVGPPVPCCYIKLVSWDEG 516 (721)
Q Consensus 443 ~~~~lr~v~~gG~~l~~~~~~~~~~~-~g~~l~~~YG~TE~~~~~~~~~~~~-----~~~~~vG~p~p~~~v~i~d~~~~ 516 (721)
..++||.+++|||++++++.+.+.+. .+++++|+||+||+++.++...... ....++|+|++|++++|+| +++
T Consensus 4807 ~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d-~~~ 4885 (5163)
T PRK12316 4807 EPPSLRVYCFGGEAVAQASYDLAWRALKPVYLFNGYGPTETTVTVLLWKARDGDACGAAYMPIGTPLGNRSGYVLD-GQL 4885 (5163)
T ss_pred CCCCccEEEEecccCCHHHHHHHHHhCCCCEEEecccCccceEEEEEEEcccccccCCCCCcccccccCCEEEEEC-CCC
Confidence 12589999999999999998665544 4789999999999998776544322 2347899999999999998 566
Q ss_pred CcccCCCCCCcceEEEccccccccccCCCcccccccccCC---CCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeee
Q 004977 517 GYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVDE---RGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEY 593 (721)
Q Consensus 517 ~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~~---~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~ 593 (721)
.. +++|++|||+|+|+++++||+++|+.|+++|..++ +|.+||+|||+|++++||.|+|+||+||+||+ +|++
T Consensus 4886 ~~---~p~g~~GEl~i~G~~v~~GY~~~~~~t~~~f~~~p~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~~iki-~G~r 4961 (5163)
T PRK12316 4886 NP---LPVGVAGELYLGGEGVARGYLERPALTAERFVPDPFGAPGGRLYRTGDLARYRADGVIDYLGRVDHQVKI-RGFR 4961 (5163)
T ss_pred Cc---CCCCCCceEEECCcccchhhcCChhhhhhhccCCCCCCCCcceeecCceeEECCCCcEEEeccccceEee-ccEe
Confidence 55 45899999999999999999999999999996432 24579999999999999999999999999998 5999
Q ss_pred eechHHHHHHhcCcccceEEEEecCCC--ceEEEEEEcChHHHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHH
Q 004977 594 ISLGKVEAALISSDYVDNIMIHADPFH--NYCVALVVPSHKALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKA 671 (721)
Q Consensus 594 v~p~eIE~~l~~~p~V~~~~V~g~~~~--~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 671 (721)
|+|.|||++|.+||+|.+|+|++.++. +.++|+|++...... ...+....+.++|+++++
T Consensus 4962 i~~~eIE~~l~~~p~V~~a~v~~~~~~~~~~l~a~v~~~~~~~~-----------------~~~~~~~~~~~~l~~~l~- 5023 (5163)
T PRK12316 4962 IELGEIEARLREHPAVREAVVIAQEGAVGKQLVGYVVPQDPALA-----------------DADEAQAELRDELKAALR- 5023 (5163)
T ss_pred ecHHHHHHHHHhCCCcceEEEEEeeCCCCcEEEEEEeCCccccc-----------------cccccchhhHHHHHHHHh-
Confidence 999999999999999999999987643 469999998754210 011223345678999998
Q ss_pred CCCCCcccccEEEeeCCCCCCCCCccCcccccChHHHHHHHHHHHHhhh
Q 004977 672 AKLDKFEIPAKIKLMPEPWTPEAGLVTAALKIKREQLKAKFKDDLQMLY 720 (721)
Q Consensus 672 ~~L~~~~~P~~i~~~~~~~~p~~~~~t~~gKi~R~~l~~~~~~~i~~~Y 720 (721)
.+||.||+|..+++++++ | +|++||++|++|.+.+.+.+++.|
T Consensus 5024 ~~lp~y~vP~~~~~~~~l--P----~t~~GKvdR~~L~~~~~~~~~~~~ 5066 (5163)
T PRK12316 5024 ERLPEYMVPAHLVFLARM--P----LTPNGKLDRKALPQPDASLLQQAY 5066 (5163)
T ss_pred ccCchhhCCcceeecccC--C----CCCCcccChhhcCCcccccccccc
Confidence 999999999999999987 6 999999999999988877666554
No 54
>PRK06839 acyl-CoA synthetase; Validated
Probab=100.00 E-value=9.8e-67 Score=584.27 Aligned_cols=487 Identities=24% Similarity=0.320 Sum_probs=399.5
Q ss_pred CCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHh-CCCCCCCEEEE
Q 004977 82 STMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVN-FGHNVDTRAAI 160 (721)
Q Consensus 82 ~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~-~Gv~~gd~V~i 160 (721)
..+.+.|+++|+++||++|+++ +++ .+||+||.++++++|+.|++ .|+++|++|++
T Consensus 2 ~~~~~~~~~~a~~~p~~~a~~~------------~~~-----------~~ty~~l~~~~~~la~~L~~~~g~~~~~~V~i 58 (496)
T PRK06839 2 QGIAYWIEKRAYLHPDRIAIIT------------EEE-----------EMTYKQLHEYVSKVAAYLIYELNVKKGERIAI 58 (496)
T ss_pred ccHHHHHHHHHHHCCCCeEEEE------------CCc-----------eEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEE
Confidence 3578999999999999999985 443 79999999999999999985 79999999999
Q ss_pred EccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccchhHHHhhhhcCCCccEEEEecCCCCCcc
Q 004977 161 LAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEKD 240 (721)
Q Consensus 161 ~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~ 240 (721)
+++|+++++++++||+++|++++|+++.++.+++.++++.++++++++++...+.+..+..... ...++.+.
T Consensus 59 ~~~~~~~~~~~~la~~~~G~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~------- 130 (496)
T PRK06839 59 LSQNSLEYIVLLFAIAKVECIAVPLNIRLTENELIFQLKDSGTTVLFVEKTFQNMALSMQKVSY-VQRVISIT------- 130 (496)
T ss_pred ECCCCHHHHHHHHHHHhcCcEEEecCcccCHHHHHHHHHhcCceEEEEcHHHHHHHHHhhhccC-cceEEEec-------
Confidence 9999999999999999999999999999999999999999999999999887666555433221 12222211
Q ss_pred CCccCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHHHHHHHhhCCCCCCCcEE
Q 004977 241 SGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNPGRSDVY 320 (721)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~d~~ 320 (721)
+++++.... ........++++++|+|||||||.||+|+++|+++..........+ .+..+|++
T Consensus 131 -------------~~~~~~~~~---~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~-~~~~~d~~ 193 (496)
T PRK06839 131 -------------SLKEIEDRK---IDNFVEKNESASFIICYTSGTTGKPKGAVLTQENMFWNALNNTFAI-DLTMHDRS 193 (496)
T ss_pred -------------chHhhhccC---CCCCCCCCCCCcEEEEeCCCCCCCCcEEEEEhHHHHHHHHHHHHHc-CCCCCCeE
Confidence 222222211 1122345678999999999999999999999999987776666666 78899999
Q ss_pred EeccChHHHHHHHH-HHHHHHhcceEeeCccccccccchhhccCccCcceeecceEEeechHHHHHHHHHHHHHHHhhcc
Q 004977 321 LAYLPLAHVLELAA-ESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKGG 399 (721)
Q Consensus 321 l~~~pl~h~~g~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~ 399 (721)
+..+|++|..++.. .+.++..|+++++.+... +..++..++++++|++.++|++++.+.+....
T Consensus 194 l~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~--------~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~------- 258 (496)
T PRK06839 194 IVLLPLFHIGGIGLFAFPTLFAGGVIIVPRKFE--------PTKALSMIEKHKVTVVMGVPTIHQALINCSKF------- 258 (496)
T ss_pred EEeeCCcchhhHHHHHHHHHhcCcEEEEccCCC--------HHHHHHHHHhhCCeEEEehHHHHHHHHhCccc-------
Confidence 99999999998865 467799999988743221 11223338999999999999999998763110
Q ss_pred hhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHHHHHHHhhCCcccccccc
Q 004977 400 LTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMGAPIGQAYGL 479 (721)
Q Consensus 400 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~~~~~~g~~l~~~YG~ 479 (721)
.....+++|.+++||+++++++.+.++.. |+++.+.||+
T Consensus 259 ----------------------------------------~~~~~~~lr~~~~gG~~~~~~~~~~~~~~-g~~~~~~YG~ 297 (496)
T PRK06839 259 ----------------------------------------ETTNLQSVRWFYNGGAPCPEELMREFIDR-GFLFGQGFGM 297 (496)
T ss_pred ----------------------------------------ccCCCcccceEEECCCCCCHHHHHHHHHh-CCeeEeeccC
Confidence 00112589999999999999999998886 9999999999
Q ss_pred ccccccccccCCC--CCCCCccCCCcCcceEEEEecCCCCcccCCCCCCcceEEEccccccccccCCCcccccccccCCC
Q 004977 480 TETCAGSTFSEWD--DPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVDER 557 (721)
Q Consensus 480 TE~~~~~~~~~~~--~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~~~ 557 (721)
||++..++..... ....+++|+|+++++++|+| +++.. +++|+.|||+|+|+.++.||+++++.+...+ .+
T Consensus 298 tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d-~~~~~---~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~---~~ 370 (496)
T PRK06839 298 TETSPTVFMLSEEDARRKVGSIGKPVLFCDYELID-ENKNK---VEVGEVGELLIRGPNVMKEYWNRPDATEETI---QD 370 (496)
T ss_pred CCCCcceEecccccccccCCCCcccCCCceEEEEC-CCcCC---CCCCCceEEEEECCCcchhhcCChHHHHHHH---cC
Confidence 9998755433322 23458999999999999999 45554 4588999999999999999999999998887 66
Q ss_pred CcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcccceEEEEecCCCc---eEEEEEEcChHHH
Q 004977 558 GMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYVDNIMIHADPFHN---YCVALVVPSHKAL 634 (721)
Q Consensus 558 g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~~---~~~a~vv~~~~~~ 634 (721)
|||+|||+|++|++|++++.||.||+||. +|++|+|.+||++|.++|+|.+|+|++.+++. .++|+|+++++.
T Consensus 371 --g~~~TGDl~~~~~~g~~~~~GR~~d~i~~-~G~~v~p~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~- 446 (496)
T PRK06839 371 --GWLCTGDLARVDEDGFVYIVGRKKEMIIS-GGENIYPLEVEQVINKLSDVYEVAVVGRQHVKWGEIPIAFIVKKSSS- 446 (496)
T ss_pred --CCeeecceEEEcCCCcEEEeccccceEEE-CCEEECHHHHHHHHHhCCCeeEEEEEeccccccCceEEEEEEECCCC-
Confidence 89999999999999999999999999996 69999999999999999999999999988654 588999987532
Q ss_pred HHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCCCCCCCCccCcccccChHHHHHHHHH
Q 004977 635 EKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEPWTPEAGLVTAALKIKREQLKAKFKD 714 (721)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~~~p~~~~~t~~gKi~R~~l~~~~~~ 714 (721)
..+ .++|+++++ .+|+.|++|..+++++++ | +|++||++|++|+++.++
T Consensus 447 ---------~~~---------------~~~l~~~~~-~~l~~~~~P~~~~~v~~~--P----~t~~GKi~r~~l~~~~~~ 495 (496)
T PRK06839 447 ---------VLI---------------EKDVIEHCR-LFLAKYKIPKEIVFLKEL--P----KNATGKIQKAQLVNQLKS 495 (496)
T ss_pred ---------CCC---------------HHHHHHHHH-hhCcCCCCCcEEEEeccC--C----CCccccccHHHHHHHhhc
Confidence 000 257888888 899999999999999988 6 999999999999987654
No 55
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=9e-67 Score=597.32 Aligned_cols=514 Identities=19% Similarity=0.227 Sum_probs=383.0
Q ss_pred cCCCCCCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCCC
Q 004977 77 PWKGASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDT 156 (721)
Q Consensus 77 ~~~~~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd 156 (721)
+++...|+.++|+++++++|+++|+++.+.. ++. .+.++.+||+||.++++++|++|.+. +++||
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~--------~~~------~g~~~~~Ty~el~~~~~~lA~~L~~~-~~~gd 93 (612)
T PRK12476 29 ALPPGTTLISLIERNIANVGDTVAYRYLDHS--------HSA------AGCAVELTWTQLGVRLRAVGARLQQV-AGPGD 93 (612)
T ss_pred cCCccCcHHHHHHHHHHhCCCceEEEEEccC--------CCC------CCcceEEeHHHHHHHHHHHHHHHHHh-cCCCC
Confidence 4455579999999999999999999864210 100 12345799999999999999999987 99999
Q ss_pred EEEEEccCcHhHHHHHHHHHhcCCEEEEe-cCCCC--HHHHHHHHHhcCceEEEECccchhHHHhhhhcCCCc--cEEEE
Q 004977 157 RAAILAETCVEWFIAFQGCFRQSITVVTI-YSSLG--EDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTI--KNVIY 231 (721)
Q Consensus 157 ~V~i~~~n~~e~~~~~lA~~~~G~~~vpl-~~~~~--~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~--~~ii~ 231 (721)
+|+|+++|+++|+++++||+++|++++|+ ++.++ ++++.+++++++++++|+++...+.+......++.. ..++.
T Consensus 94 ~V~l~~~n~~e~~~~~lA~~~aG~v~vpl~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~i~ 173 (612)
T PRK12476 94 RVAILAPQGIDYVAGFFAAIKAGTIAVPLFAPELPGHAERLDTALRDAEPTVVLTTTAAAEAVEGFLRNLPRLRRPRVIA 173 (612)
T ss_pred EEEEECCCChhHHHHHHHHHHcCceeEecCCCCcchhHHHHHHHHHhCCCCEEEEcHHHHHHHHHHHhhcccccCceEEE
Confidence 99999999999999999999999999999 57776 789999999999999999987776655544333321 23443
Q ss_pred ecCCCCCccCCccCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHHHHHHHhhC
Q 004977 232 FENDGSEKDSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLI 311 (721)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~ 311 (721)
++.... .. ..........++|+++|+|||||||.||||++||+++.+.+......+
T Consensus 174 ~~~~~~-----------------------~~-~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~l~~~~~~~~~~~ 229 (612)
T PRK12476 174 IDAIPD-----------------------SA-GESFVPVELDTDDVSHLQYTSGSTRPPVGVEITHRAVGTNLVQMILSI 229 (612)
T ss_pred eccccc-----------------------cc-cccccCCCCCCCceEEEEeCCCCCCCCceEEeeHHHHHHHHHHHHHHh
Confidence 322110 00 001111234678999999999999999999999999998877766666
Q ss_pred CC-CCCCcEEEeccChHHHHHHHHHHHHHHhcceEeeCccccc-cccchhhccCccCcc--eeecceEEeechHHHHHHH
Q 004977 312 PN-PGRSDVYLAYLPLAHVLELAAESIMLCAGCAIGYGSTLTM-TDTSSKIKKGTKGDV--SVLKPTLMAAVPAIFDRVR 387 (721)
Q Consensus 312 ~~-~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~~~~~~~~~-~~~~~~~~~~~~~~i--~~~~~t~l~~~P~~~~~l~ 387 (721)
. +.+++++++++|++|.+++...+.+++.|+++++..+..+ .+. ..++..+ .++++|+++++|+++..+.
T Consensus 230 -~~~~~~~~~l~~~Pl~h~~g~~~~~~~~~~gg~~~~~~~~~~~~~p-----~~~~~~i~~~~~~~t~~~~~P~~~~~l~ 303 (612)
T PRK12476 230 -DLLDRNTHGVSWLPLYHDMGLSMIGFPAVYGGHSTLMSPTAFVRRP-----QRWIKALSEGSRTGRVVTAAPNFAYEWA 303 (612)
T ss_pred -ccCCCCceEEEeCCcccccchHHHHHHHhcCCeEEEECHHHHHHHH-----HHHHHHHhhhccCCeEEEeCCcHHHHHH
Confidence 6 7889999999999999999876666666776665433211 111 1222226 4588999999999988876
Q ss_pred HHHHHHHHhhcchhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHHHHHHH
Q 004977 388 EGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINI 467 (721)
Q Consensus 388 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~~~~ 467 (721)
........ ......+++| +++||+++++++.+.+.+
T Consensus 304 ~~~~~~~~-------------------------------------------~~~~~l~~lr-~~~gg~~~~~~~~~~~~~ 339 (612)
T PRK12476 304 AQRGLPAE-------------------------------------------GDDIDLSNVV-LIIGSEPVSIDAVTTFNK 339 (612)
T ss_pred HHhcChhh-------------------------------------------hcCcchhHhe-EEecccCCCHHHHHHHHH
Confidence 52100000 0001124789 999999999999998888
Q ss_pred hh---CC---ccccccccccccccccccCCCC---------------------------CCCCccCCCcCcceEEEEecC
Q 004977 468 CM---GA---PIGQAYGLTETCAGSTFSEWDD---------------------------PSVGRVGPPVPCCYIKLVSWD 514 (721)
Q Consensus 468 ~~---g~---~l~~~YG~TE~~~~~~~~~~~~---------------------------~~~~~vG~p~p~~~v~i~d~~ 514 (721)
.+ |+ .+++.||+||++..++...+.. ...+++|+|+||++++|+|.+
T Consensus 340 ~~~~~g~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~G~~~~g~~v~ivd~~ 419 (612)
T PRK12476 340 AFAPYGLPRTAFKPSYGIAEATLFVATIAPDAEPSVVYLDREQLGAGRAVRVAADAPNAVAHVSCGQVARSQWAVIVDPD 419 (612)
T ss_pred HHHhcCCCccccccccchhhhheeeeccCCCCCceEEEEcHHHhhCCCeeecCCCCCCcceeEeCCCcCCCCEEEEEeCC
Confidence 76 44 4899999999976554332211 012589999999999999954
Q ss_pred CCCcccCCCCCCcceEEEccccccccccCCCcccccccccC-----CC---------CcceEeeCcEEEEccCCeEEEEe
Q 004977 515 EGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVD-----ER---------GMCWFYTGDIGQVYPDGCLEIID 580 (721)
Q Consensus 515 ~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~-----~~---------g~gw~~TGDlg~~d~dG~l~i~G 580 (721)
++..+ ++|+.|||+++|++++.|||++|+.|++.|... .+ +.+||+|||+|+++ ||+|+|+|
T Consensus 420 ~g~~~---~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~~~~~~~~g~~~~~~~~~~~w~~TGDlg~~~-dG~l~i~G 495 (612)
T PRK12476 420 TGAEL---PDGEVGEIWLHGDNIGRGYWGRPEETERTFGAKLQSRLAEGSHADGAADDGTWLRTGDLGVYL-DGELYITG 495 (612)
T ss_pred CCcCC---CCCCEEEEEEcCCcccccccCChHHHHHHHhhhhccccccccccccccCCCCeeeccccceeE-CCEEEEEe
Confidence 46654 488999999999999999999999999998410 01 23699999999985 99999999
Q ss_pred cCCCeEEcCCeeeeechHHHHHHhc-Ccccce--EEEEecCCC--ceEEEEEEcChHHHHHHHHHhCCCcccHHHHhccH
Q 004977 581 RKKDIVKLQHGEYISLGKVEAALIS-SDYVDN--IMIHADPFH--NYCVALVVPSHKALEKWAHEASIKYEDLSELCNKA 655 (721)
Q Consensus 581 R~~d~ik~~~G~~v~p~eIE~~l~~-~p~V~~--~~V~g~~~~--~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~ 655 (721)
|+||+||+ +|++|+|.|||++|.+ ||.|.+ ++|++.+++ +.++++|++.++... .
T Consensus 496 R~~d~I~~-~G~~I~p~eIE~~l~~~~p~V~~~~v~v~~~~~~~~~~~~~~v~~~~~~~~---------~---------- 555 (612)
T PRK12476 496 RIADLIVI-DGRNHYPQDIEATVAEASPMVRRGYVTAFTVPAEDNERLVIVAERAAGTSR---------A---------- 555 (612)
T ss_pred ccCcEEEE-CCcccCHHHHHHHHHHhcccccCCcEEEEEecCCCcceEEEEEEecCCccc---------c----------
Confidence 99999997 6999999999999985 899999 777887765 468888887653200 0
Q ss_pred HHHHHHHHHHHHHHHHCCCCCccc-ccEEEeeCC--CCCCCCCccCcccccChHHHHHHHHH
Q 004977 656 EAVNEVQQALSKVAKAAKLDKFEI-PAKIKLMPE--PWTPEAGLVTAALKIKREQLKAKFKD 714 (721)
Q Consensus 656 ~~~~~~~~~l~~~~~~~~L~~~~~-P~~i~~~~~--~~~p~~~~~t~~gKi~R~~l~~~~~~ 714 (721)
..+++.+.+++.+. . .|++ |+.+++++. + | +|++|||+|++|+++|.+
T Consensus 556 -~~~~l~~~~~~~l~-~---~~~~~p~~v~~v~~~~l--P----~t~~GKi~r~~L~~~~~~ 606 (612)
T PRK12476 556 -DPAPAIDAIRAAVS-R---RHGLAVADVRLVPAGAI--P----RTTSGKLARRACRAQYLD 606 (612)
T ss_pred -cHHHHHHHHHHHHH-H---hhCCcceEEEEECCCCc--C----cCCchHHHHHHHHHHHHc
Confidence 01222334444433 1 3667 688888874 5 6 999999999999998864
No 56
>PLN03052 acetate--CoA ligase; Provisional
Probab=100.00 E-value=4.6e-66 Score=595.56 Aligned_cols=522 Identities=17% Similarity=0.164 Sum_probs=391.9
Q ss_pred HHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEccC
Q 004977 85 AALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAET 164 (721)
Q Consensus 85 ~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n 164 (721)
...|.++++++|+++|+++.+ ++. ..++++.+||+||.++++++|++|+++|+++||+|+++++|
T Consensus 178 ~~~l~~~~~~~pd~~Ai~~~~----------e~~-----~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrVai~~pn 242 (728)
T PLN03052 178 ECCLTPKPSKTDDSIAIIWRD----------EGS-----DDLPVNRMTLSELRSQVSRVANALDALGFEKGDAIAIDMPM 242 (728)
T ss_pred HHHHHHHhccCCCCeEEEEEC----------CCC-----CCCceEEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCC
Confidence 345666666799999999853 110 01234679999999999999999999999999999999999
Q ss_pred cHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccch------hHHHhhhhcCCCccEEEEecCCCCC
Q 004977 165 CVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQL------KKLSAVSSSLKTIKNVIYFENDGSE 238 (721)
Q Consensus 165 ~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~------~~~~~~~~~~~~~~~ii~~~~~~~~ 238 (721)
++|+++++|||+++|++++|+++.++++++.+++++++++++|+++... +....+..... ..++.+......
T Consensus 243 ~~e~via~LA~~~~Gav~vpi~p~~~~~~l~~rl~~~~~k~lit~d~~~~~gk~~~~~~~~~~~~~--~~~iv~~~~~~~ 320 (728)
T PLN03052 243 NVHAVIIYLAIILAGCVVVSIADSFAPSEIATRLKISKAKAIFTQDVIVRGGKSIPLYSRVVEAKA--PKAIVLPADGKS 320 (728)
T ss_pred CHHHHHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHHHhcC--CcEEEEeCCCCc
Confidence 9999999999999999999999999999999999999999999987532 22222221111 123333221100
Q ss_pred ccCCccCCCCCceEeeHHHHHhcCCC----CCCCCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHHHHHHHhhCCCC
Q 004977 239 KDSGVSGGISNWTVSSFSEVEKLGKR----SPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNP 314 (721)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~ 314 (721)
. ... . .....+|+++...... ....+....++++++|+|||||||.||||+++|++++..+......+ ++
T Consensus 321 ~--~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~IlyTSGTTG~PKgVv~sh~~~l~~~~~~~~~~-~l 394 (728)
T PLN03052 321 V--RVK-L--REGDMSWDDFLARANGLRRPDEYKAVEQPVEAFTNILFSSGTTGEPKAIPWTQLTPLRAAADAWAHL-DI 394 (728)
T ss_pred c--ccc-c--ccCCccHHHHHhccccccccccccccccCCCCcEEEEecCCCCCCCceEEECchHHHHHHHHHHHhc-CC
Confidence 0 000 0 0112457776543211 11111223568999999999999999999999999887776666666 88
Q ss_pred CCCcEEEeccChHHHHHHHHHHHHHHhcceEeeCccccccccchhhccCccCcceeecceEEeechHHHHHHHHHHHHHH
Q 004977 315 GRSDVYLAYLPLAHVLELAAESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKV 394 (721)
Q Consensus 315 ~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~ 394 (721)
.++|++++++|++|+++.+.++.+|+.|+++++.+..... ..++..++++++|++.++|++++.+.+....
T Consensus 395 ~~~d~~~~~~~l~w~~g~~~v~~~L~~Gat~vl~~g~p~~-------~~~~~~i~~~~vT~l~~~Pt~l~~l~~~~~~-- 465 (728)
T PLN03052 395 RKGDIVCWPTNLGWMMGPWLVYASLLNGATLALYNGSPLG-------RGFAKFVQDAKVTMLGTVPSIVKTWKNTNCM-- 465 (728)
T ss_pred CCCcEEEECCCcHHHhHHHHHHHHHHhCCEEEEeCCCCCC-------ChHHHHHHHHCCCEEEECHHHHHHHHhcCCc--
Confidence 9999999999999999987777899999999985421111 1233449999999999999999988652100
Q ss_pred HhhcchhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHHHHHHHhhC-Ccc
Q 004977 395 EEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMG-API 473 (721)
Q Consensus 395 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~~~~~~g-~~l 473 (721)
+..+.++||.+++||++++++...++...++ .++
T Consensus 466 ---------------------------------------------~~~dlssLr~i~s~Ge~l~~~~~~~~~~~~~~~~i 500 (728)
T PLN03052 466 ---------------------------------------------AGLDWSSIRCFGSTGEASSVDDYLWLMSRAGYKPI 500 (728)
T ss_pred ---------------------------------------------ccCChhheeEEEecCCCCCHHHHHHHHHhcCCCCe
Confidence 0112258999999999999999888777665 579
Q ss_pred ccccccccccccccccCC-CCCCCCccCCCcCcceEEEEecCCCCcccCCCCCC--cceEEEcccc--ccccccCCCccc
Q 004977 474 GQAYGLTETCAGSTFSEW-DDPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMP--RGEIVVGGFN--VTAGYFNNPGKT 548 (721)
Q Consensus 474 ~~~YG~TE~~~~~~~~~~-~~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~--~GEl~v~g~~--v~~gY~~~~~~t 548 (721)
.+.||+||+++.+....+ .....+++|.|++|++++|+| ++|+.++ .|+ .|||+++++. ...+|+++. .+
T Consensus 501 ~~~yG~TE~~~~~~~~~~~~~~~~g~~g~p~~g~~v~v~d-~~g~~v~---~g~~~~GEL~v~~~~~~~~~~~~~~~-~~ 575 (728)
T PLN03052 501 IEYCGGTELGGGFVTGSLLQPQAFAAFSTPAMGCKLFILD-DSGNPYP---DDAPCTGELALFPLMFGASSTLLNAD-HY 575 (728)
T ss_pred EeeccChhhCcccccCCCCCCCCCCccccCCCCceEEEEC-CCCCCCC---CCCCceEEEEEeCCCCCCCccccCch-hh
Confidence 999999999865443222 233458899999999999999 6776654 553 6999998653 345677664 33
Q ss_pred ccccccCC--CCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHh-cCcccceEEEEecCCC----c
Q 004977 549 SEVYKVDE--RGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALI-SSDYVDNIMIHADPFH----N 621 (721)
Q Consensus 549 ~~~f~~~~--~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~-~~p~V~~~~V~g~~~~----~ 621 (721)
..-|...+ ++.+||+|||++++|+||+++|+||.||+||+ +|+||+|.|||++|. .||.|.+++|+|.+++ +
T Consensus 576 ~~yf~~~p~~~g~~~~~tGDl~~~d~dG~l~i~GR~Dd~I~~-~G~rI~~~EIE~~l~~~~p~V~eaaVvg~~d~~~g~e 654 (728)
T PLN03052 576 KVYFKGMPVFNGKILRRHGDIFERTSGGYYRAHGRADDTMNL-GGIKVSSVEIERVCNAADESVLETAAIGVPPPGGGPE 654 (728)
T ss_pred hhhhhcCCCCCCCEEEecCceEEECCCCeEEEEecCCCEEee-CCEEeCHHHHHHHHHhcCCCcceEEEEeeecCCCCcE
Confidence 33342112 23359999999999999999999999999997 699999999999995 7999999999998764 4
Q ss_pred eEEEEEEcC--hHHHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCCCCCCCCccCc
Q 004977 622 YCVALVVPS--HKALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEPWTPEAGLVTA 699 (721)
Q Consensus 622 ~~~a~vv~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~~~p~~~~~t~ 699 (721)
.+++||++. ++. .. + .+++.+.|++.++ ++|+++++|+.|++++++ | +|.
T Consensus 655 ~~~afVvl~~~~g~----------~~--------~---~~~L~~~i~~~i~-~~l~~~~~p~~i~~v~~l--P----~T~ 706 (728)
T PLN03052 655 QLVIAAVLKDPPGS----------NP--------D---LNELKKIFNSAIQ-KKLNPLFKVSAVVIVPSF--P----RTA 706 (728)
T ss_pred EEEEEEEEecCCCC----------CC--------C---HHHHHHHHHHHHH-hhcCCccCCCEEEEcCCC--C----CCC
Confidence 689999986 221 00 0 1345567777777 889999999999999998 6 999
Q ss_pred ccccChHHHHHHHHHHHH
Q 004977 700 ALKIKREQLKAKFKDDLQ 717 (721)
Q Consensus 700 ~gKi~R~~l~~~~~~~i~ 717 (721)
+|||+|+.|++.+.+...
T Consensus 707 sGKi~Rr~Lr~~~~~~~~ 724 (728)
T PLN03052 707 SNKVMRRVLRQQLAQELS 724 (728)
T ss_pred chHHHHHHHHHHHHhhhh
Confidence 999999999999887653
No 57
>PRK07470 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.5e-66 Score=585.04 Aligned_cols=501 Identities=21% Similarity=0.295 Sum_probs=405.3
Q ss_pred CCCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEE
Q 004977 81 ASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAI 160 (721)
Q Consensus 81 ~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i 160 (721)
..|+.++|.+.++++|+++|+.+ ++. .+||+||.++++++|..|.+.|+++||+|+|
T Consensus 6 ~~~~~~~~~~~a~~~p~~~a~~~------------~~~-----------~~Ty~el~~~~~~~a~~L~~~g~~~g~~v~i 62 (528)
T PRK07470 6 VMNLAHFLRQAARRFPDRIALVW------------GDR-----------SWTWREIDARVDALAAALAARGVRKGDRILV 62 (528)
T ss_pred CCCHHHHHHHHHHHCCCceEEEE------------CCc-----------cccHHHHHHHHHHHHHHHHHhCCCCCCEEEE
Confidence 46899999999999999999975 332 6999999999999999999999999999999
Q ss_pred EccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccchhHHHhhhhcCCCccEEEEecCCCCCcc
Q 004977 161 LAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEKD 240 (721)
Q Consensus 161 ~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~ 240 (721)
+++|+++++++++||+++|++++|+++.++.+++.++++.++++.++++.+..+.+..+....+....++.++...
T Consensus 63 ~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 138 (528)
T PRK07470 63 HSRNCNQMFESMFAAFRLGAVWVPTNFRQTPDEVAYLAEASGARAMICHADFPEHAAAVRAASPDLTHVVAIGGAR---- 138 (528)
T ss_pred EcCCCHHHHHHHHHHHhCCeEEEecCccCCHHHHHHHHHhcCceEEEEcchhHHHHHHHHhhCCcCceEEEeCCCc----
Confidence 9999999999999999999999999999999999999999999999999887666655554455555666554321
Q ss_pred CCccCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHHHHHHHhh-CCCCCCCcE
Q 004977 241 SGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTL-IPNPGRSDV 319 (721)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~-~~~~~~~d~ 319 (721)
...+++++...............++++++|+|||||||.||+|+++|+++...+...... +.+..+.|+
T Consensus 139 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~d~ 208 (528)
T PRK07470 139 ----------AGLDYEALVARHLGARVANAAVDHDDPCWFFFTSGTTGRPKAAVLTHGQMAFVITNHLADLMPGTTEQDA 208 (528)
T ss_pred ----------ccccHHHHHhcCCCCCCCcccCCCCCeEEEEeCCCCCCCCcEEEEehhhHHHHHHHHHHHhccCCCcccE
Confidence 123455554432222222334567899999999999999999999999997665543332 235678899
Q ss_pred EEeccChHHHHHHHHHHHHHHhcceEeeCccccccccchhhccCccCcceeecceEEeechHHHHHHHHHHHHHHHhhcc
Q 004977 320 YLAYLPLAHVLELAAESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKGG 399 (721)
Q Consensus 320 ~l~~~pl~h~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~ 399 (721)
++..+|++|++++...+ .++.|++.++.+...+ + ...++..++++++|++.++|++++.+.+....
T Consensus 209 ~l~~~p~~~~~~~~~~~-~~~~g~~~~~~~~~~~-~-----~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~------- 274 (528)
T PRK07470 209 SLVVAPLSHGAGIHQLC-QVARGAATVLLPSERF-D-----PAEVWALVERHRVTNLFTVPTILKMLVEHPAV------- 274 (528)
T ss_pred EEEeccchhHHHHHHHH-HHhcCceEEEecccCc-C-----HHHHHHHHHhcCCeEEechHHHHHHHHhCcCc-------
Confidence 99999999999987544 5677777766332111 1 12233449999999999999999988652110
Q ss_pred hhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHHHHHHHhhCCcccccccc
Q 004977 400 LTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMGAPIGQAYGL 479 (721)
Q Consensus 400 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~~~~~~g~~l~~~YG~ 479 (721)
...+.+++|.+++||++++++..+.+...+|.++++.||+
T Consensus 275 ----------------------------------------~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~g~~~~~~YG~ 314 (528)
T PRK07470 275 ----------------------------------------DRYDHSSLRYVIYAGAPMYRADQKRALAKLGKVLVQYFGL 314 (528)
T ss_pred ----------------------------------------CCCCCcceEEEEEcCCCCCHHHHHHHHHHhCcHHHHhCCC
Confidence 0112258999999999999999888888889999999999
Q ss_pred ccccccccccCC--------CCCCCCccCCCcCcceEEEEecCCCCcccCCCCCCcceEEEccccccccccCCCcccccc
Q 004977 480 TETCAGSTFSEW--------DDPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEV 551 (721)
Q Consensus 480 TE~~~~~~~~~~--------~~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~ 551 (721)
||+++.++.... .....+++|+|+++++++|+| +++..+ +.|+.|||+++|+.++.||+++++.+.+.
T Consensus 315 TE~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~d-~~~~~~---~~g~~Gel~i~~~~~~~gy~~~~~~~~~~ 390 (528)
T PRK07470 315 GEVTGNITVLPPALHDAEDGPDARIGTCGFERTGMEVQIQD-DEGREL---PPGETGEICVIGPAVFAGYYNNPEANAKA 390 (528)
T ss_pred cccCCceeecchhhccccccccceeeccCcccCCcEEEEEC-CCCCCC---CCCCceEEEEeCCccchhhcCCHHHHHhh
Confidence 999876654322 122347899999999999999 566654 47899999999999999999999999988
Q ss_pred cccCCCCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcccceEEEEecCCCc---eEEEEEE
Q 004977 552 YKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYVDNIMIHADPFHN---YCVALVV 628 (721)
Q Consensus 552 f~~~~~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~~---~~~a~vv 628 (721)
| .+ |||+|||+|++++||++++.||.||+||+ +|++|+|.+||++|.++|.|.+|+|++.+++. .++++++
T Consensus 391 ~---~~--~~~~TGDl~~~~~~g~l~~~GR~dd~i~~-~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~~~ 464 (528)
T PRK07470 391 F---RD--GWFRTGDLGHLDARGFLYITGRASDMYIS-GGSNVYPREIEEKLLTHPAVSEVAVLGVPDPVWGEVGVAVCV 464 (528)
T ss_pred h---cC--CcEecceeEEEccCCeEEEeCCccceEEe-CCEEECHHHHHHHHHhCCCceEEEEEeccCcccCceeEEEEE
Confidence 8 66 89999999999999999999999999997 59999999999999999999999999988753 4788888
Q ss_pred cChHHHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCCCCCCCCccCcccccChHHH
Q 004977 629 PSHKALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEPWTPEAGLVTAALKIKREQL 708 (721)
Q Consensus 629 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~~~p~~~~~t~~gKi~R~~l 708 (721)
+.++. ..+ .++++++++ ++|++|++|..+++++++ | +|++||++|+.|
T Consensus 465 ~~~~~----------~~~---------------~~~~~~~l~-~~l~~~~~P~~~~~~~~i--P----~t~~GKi~r~~l 512 (528)
T PRK07470 465 ARDGA----------PVD---------------EAELLAWLD-GKVARYKLPKRFFFWDAL--P----KSGYGKITKKMV 512 (528)
T ss_pred ECCCC----------CCC---------------HHHHHHHHH-HhhhcCCCCcEEEEeccC--C----CCCcccccHHHH
Confidence 76432 000 256788888 899999999999999987 6 999999999999
Q ss_pred HHHHHH
Q 004977 709 KAKFKD 714 (721)
Q Consensus 709 ~~~~~~ 714 (721)
++++.+
T Consensus 513 ~~~~~~ 518 (528)
T PRK07470 513 REELEE 518 (528)
T ss_pred HHHHHh
Confidence 988765
No 58
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=3.1e-66 Score=578.13 Aligned_cols=477 Identities=27% Similarity=0.370 Sum_probs=396.2
Q ss_pred CCCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEE
Q 004977 81 ASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAI 160 (721)
Q Consensus 81 ~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i 160 (721)
++|+.++|++++.++||++|+.+ ++ +.+||+||.++++++|+.|.+.|+++||+|++
T Consensus 1 ~~~~~~~l~~~a~~~p~~~a~~~------------~~-----------~~~Ty~el~~~~~~~a~~L~~~g~~~~~~v~i 57 (483)
T PRK03640 1 METMPNWLKQRAFLTPDRTAIEF------------EE-----------KKVTFMELHEAVVSVAGKLAALGVKKGDRVAL 57 (483)
T ss_pred CCcHHHHHHHHHHhCCCceEEEe------------CC-----------eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEE
Confidence 46899999999999999999985 22 36999999999999999999999999999999
Q ss_pred EccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccchhHHHhhhhcCCCccEEEEecCCCCCcc
Q 004977 161 LAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEKD 240 (721)
Q Consensus 161 ~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~ 240 (721)
+++|++++++++|||+++|++++|+++.++.+++.+++++++++.+++++.....+....
T Consensus 58 ~~~~~~~~~~~~la~~~~G~~~v~i~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~-------------------- 117 (483)
T PRK03640 58 LMKNGMEMILVIHALQQLGAVAVLLNTRLSREELLWQLDDAEVKCLITDDDFEAKLIPGI-------------------- 117 (483)
T ss_pred ECCCCHHHHHHHHHHHhCCcEEEecCcCCCHHHHHHHHHhCCCCEEEEcchhhHHHhhhc--------------------
Confidence 999999999999999999999999999999999999999999999999876554332210
Q ss_pred CCccCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHHHHHHHhhCCCCCCCcEE
Q 004977 241 SGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNPGRSDVY 320 (721)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~d~~ 320 (721)
...++++...............++++++++|||||||.||+|++||+|+...+......+ ++.++|++
T Consensus 118 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~-~~~~~d~~ 185 (483)
T PRK03640 118 -----------SVKFAELMNGPKEEAEIQEEFDLDEVATIMYTSGTTGKPKGVIQTYGNHWWSAVGSALNL-GLTEDDCW 185 (483)
T ss_pred -----------cccHHHHhhcccccCCCCCCCCCCCeEEEEeCCCcCCCCcEEEEecHHHHHHHHHHHHhc-CCCcCcEE
Confidence 011333332211111122344678999999999999999999999999998887777777 89999999
Q ss_pred EeccChHHHHHHHHHHHHHHhcceEeeCccccccccchhhccCccCcceeecceEEeechHHHHHHHHHHHHHHHhhcch
Q 004977 321 LAYLPLAHVLELAAESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKGGL 400 (721)
Q Consensus 321 l~~~pl~h~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~ 400 (721)
++.+|++|++++...+.++..|+++++.+... ...++..++++++|++.++|+++..+.+.....
T Consensus 186 l~~~p~~~~~g~~~~~~~l~~G~~~~~~~~~~--------~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~------- 250 (483)
T PRK03640 186 LAAVPIFHISGLSILMRSVIYGMRVVLVEKFD--------AEKINKLLQTGGVTIISVVSTMLQRLLERLGEG------- 250 (483)
T ss_pred EEecCHHHHHHHHHHHHHHhcCCEEEecCCCC--------HHHHHHHHHHhCCcEEEeHHHHHHHHHhCcCcc-------
Confidence 99999999999888888899999998854321 122333399999999999999999886531110
Q ss_pred hhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHHHHHHHhhCCccccccccc
Q 004977 401 TKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMGAPIGQAYGLT 480 (721)
Q Consensus 401 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~~~~~~g~~l~~~YG~T 480 (721)
....++|.+++||+++++.+.+.++. +|+++++.||+|
T Consensus 251 -----------------------------------------~~~~~lr~~~~~g~~~~~~~~~~~~~-~~~~~~~~YG~t 288 (483)
T PRK03640 251 -----------------------------------------TYPSSFRCMLLGGGPAPKPLLEQCKE-KGIPVYQSYGMT 288 (483)
T ss_pred -----------------------------------------ccCCcceEEEEcCCCCCHHHHHHHHH-hCCCeeeeeccC
Confidence 01148999999999999999988877 499999999999
Q ss_pred cccccccccCCC--CCCCCccCCCcCcceEEEEecCCCCcccCCCCCCcceEEEccccccccccCCCcccccccccCCCC
Q 004977 481 ETCAGSTFSEWD--DPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVDERG 558 (721)
Q Consensus 481 E~~~~~~~~~~~--~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~~~g 558 (721)
|++..++..... ....+++|+|+++++++|.| + +.. ++.|..|||+|+|++++.||+++++.+.+.| .+
T Consensus 289 E~~~~~~~~~~~~~~~~~~~vG~p~~~~~~~i~~-~-~~~---~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~---~~- 359 (483)
T PRK03640 289 ETASQIVTLSPEDALTKLGSAGKPLFPCELKIEK-D-GVV---VPPFEEGEIVVKGPNVTKGYLNREDATRETF---QD- 359 (483)
T ss_pred cccccccccCcccccccCCCcccccCCcEEEEec-C-CCc---CCCCCceEEEEECcchhhhhcCCHHHHHHHH---hc-
Confidence 987654433332 23458999999999999997 3 333 5588999999999999999999999999988 66
Q ss_pred cceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcccceEEEEecCCC---ceEEEEEEcChHHHH
Q 004977 559 MCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYVDNIMIHADPFH---NYCVALVVPSHKALE 635 (721)
Q Consensus 559 ~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~~a~vv~~~~~~~ 635 (721)
|||+|||++++++||+++++||+||+||+ +|++|+|.+||+++.++|+|.+++|++.+++ ..+++++++....
T Consensus 360 -~~~~tGDl~~~~~~g~l~~~GR~~~~i~~-~G~~v~~~~ie~~i~~~~~v~~~~v~~~~~~~~~~~~~~~~~~~~~~-- 435 (483)
T PRK03640 360 -GWFKTGDIGYLDEEGFLYVLDRRSDLIIS-GGENIYPAEIEEVLLSHPGVAEAGVVGVPDDKWGQVPVAFVVKSGEV-- 435 (483)
T ss_pred -CCeeccceEEEcCCCCEEEeecccCeEEe-CCEEECHHHHHHHHHhCCCeeEEEEEeCCCcccCCceEEEEEeCCCC--
Confidence 89999999999999999999999999996 6999999999999999999999999998764 3477777754321
Q ss_pred HHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCCCCCCCCccCcccccChHHHHHHHHH
Q 004977 636 KWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEPWTPEAGLVTAALKIKREQLKAKFKD 714 (721)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~~~p~~~~~t~~gKi~R~~l~~~~~~ 714 (721)
+ .++++++++ .+|++|++|+.|++++++ | +|++||++|++|++++++
T Consensus 436 --------~-----------------~~~l~~~~~-~~l~~~~~p~~i~~~~~i--P----~t~~gK~~r~~l~~~~~~ 482 (483)
T PRK03640 436 --------T-----------------EEELRHFCE-EKLAKYKVPKRFYFVEEL--P----RNASGKLLRHELKQLVEE 482 (483)
T ss_pred --------C-----------------HHHHHHHHH-HhccCCCCCcEEEEeCCC--C----CCCccceeHHHHHHHHhh
Confidence 0 256778887 889999999999999988 6 999999999999999875
No 59
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=5.9e-66 Score=587.36 Aligned_cols=520 Identities=19% Similarity=0.293 Sum_probs=414.5
Q ss_pred CCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHh-CCCCCCCEEEE
Q 004977 82 STMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVN-FGHNVDTRAAI 160 (721)
Q Consensus 82 ~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~-~Gv~~gd~V~i 160 (721)
.|+.++|+.++..+|+++|+.+ ++. .++.+||+||.++++++|++|.+ .|+++||+|++
T Consensus 10 ~~~~~~l~~~a~~~~~~~a~~~------------~~~--------~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~~ 69 (576)
T PRK05620 10 LSLTRILEYGSTVHGDTTVTTW------------GGA--------EQEQTTFAAIGARAAALAHALHDELGITGDQRVGS 69 (576)
T ss_pred CcHHHHHHHHHHhCCCceEEEE------------cCC--------ceEEEeHHHHHHHHHHHHHHHHHhcCCCCCCEEEE
Confidence 5899999999999999999986 221 23579999999999999999986 79999999999
Q ss_pred EccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccchhHHHhhhhcCCCccEEEEecCCCCCcc
Q 004977 161 LAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEKD 240 (721)
Q Consensus 161 ~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~ 240 (721)
+++|+++++++++||+++|++++|+++.++.+++.++++.++++++|++....+.+.+....++.++.++..+......
T Consensus 70 ~~~n~~e~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~- 148 (576)
T PRK05620 70 MMYNCAEHLEVLFAVACMGAVFNPLNKQLMNDQIVHIINHAEDEVIVADPRLAEQLGEILKECPCVRAVVFIGPSDADS- 148 (576)
T ss_pred EeCCCHHHHHHHHHHHhcCCEEeecccccCHHHHHHHHhccCCcEEEEChhhHHHHHHHHhhCccccEEEEecCccccc-
Confidence 9999999999999999999999999999999999999999999999999888777777777777777777665332111
Q ss_pred CCccCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHHHHHHH--hhCCCCCCCc
Q 004977 241 SGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIK--TLIPNPGRSD 318 (721)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~--~~~~~~~~~d 318 (721)
.....+....+.+|+++.+.... ........++++++++|||||||.||||+++|+++........ ..+ .+..+|
T Consensus 149 -~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~-~~~~~~ 225 (576)
T PRK05620 149 -AAAHMPEGIKVYSYEALLDGRST-VYDWPELDETTAAAICYSTGTTGAPKGVVYSHRSLYLQSLSLRTTDSL-AVTHGE 225 (576)
T ss_pred -chhccccccccccHHHHhhcCCC-cCCCCCCCccceeEEEECCCCCCCCceEEEEcHHHHHHHHHhhhhhhc-CCCCCC
Confidence 00011123345678888764322 1222345678999999999999999999999999876554432 235 788899
Q ss_pred EEEeccChHHHHHHHHHHHHHHhcceEeeCccccccccchhhccCccCcceeecceEEeechHHHHHHHHHHHHHHHhhc
Q 004977 319 VYLAYLPLAHVLELAAESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKG 398 (721)
Q Consensus 319 ~~l~~~pl~h~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~ 398 (721)
++++.+|++|.+++...+.++..|+++++..... . +..++..++++++|+++++|+++..+........
T Consensus 226 ~~l~~~pl~h~~g~~~~~~~l~~g~~~~~~~~~~--~-----~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~---- 294 (576)
T PRK05620 226 SFLCCVPIYHVLSWGVPLAAFMSGTPLVFPGPDL--S-----APTLAKIIATAMPRVAHGVPTLWIQLMVHYLKNP---- 294 (576)
T ss_pred eEEEeCChHHhhhhHHHHHHHhcCceEEecCCCC--C-----HHHHHHHHHHhcCceeeecCHHHHHHHHHhhccC----
Confidence 9999999999999988888899999998743211 1 1223334899999999999999988765321100
Q ss_pred chhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHHHHHHHhhCCccccccc
Q 004977 399 GLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMGAPIGQAYG 478 (721)
Q Consensus 399 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~~~~~~g~~l~~~YG 478 (721)
....++|.+++||+++++++.+.+...+|+++++.||
T Consensus 295 -------------------------------------------~~~~~l~~~~~gG~~~~~~~~~~~~~~~~~~~~~~YG 331 (576)
T PRK05620 295 -------------------------------------------PERMSLQEIYVGGSAVPPILIKAWEERYGVDVVHVWG 331 (576)
T ss_pred -------------------------------------------cccCceeEEEEcCCCCCHHHHHHHHHHhCCceeeecc
Confidence 0013799999999999999999998888999999999
Q ss_pred cccccccccccCCCC--------CCCCccCCCcCcceEEEEecCCCCcccCCCCCCcceEEEccccccccccCCCccc--
Q 004977 479 LTETCAGSTFSEWDD--------PSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKT-- 548 (721)
Q Consensus 479 ~TE~~~~~~~~~~~~--------~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t-- 548 (721)
+||++..++...... ....++|++.++++++|+| + +..++ ...+..|||+++|++++.|||++++.|
T Consensus 332 ~tE~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~-~-g~~~~-~~~~~~Gel~v~g~~~~~gY~~~~~~t~~ 408 (576)
T PRK05620 332 MTETSPVGTVARPPSGVSGEARWAYRVSQGRFPASLEYRIVN-D-GQVME-STDRNEGEIQVRGNWVTASYYHSPTEEGG 408 (576)
T ss_pred ccccccceeeeccCCccccccccccccccCCcCCceeEEEec-C-Ccccc-CCCCCceEEEEEcCcccccccCCcccccc
Confidence 999987665443221 1124789999999999998 4 44332 234678999999999999999999988
Q ss_pred --ccccccC----------CCCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcccceEEEEe
Q 004977 549 --SEVYKVD----------ERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYVDNIMIHA 616 (721)
Q Consensus 549 --~~~f~~~----------~~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~~~~V~g 616 (721)
...|..+ .+ |||+|||+|++++||.++|+||.||+||. +|++|+|.+||++|.+||.|.+|+|++
T Consensus 409 ~~~~~f~~~~~~~~~~~~~~~--g~~~TGD~~~~~~dg~l~~~GR~~d~i~~-~G~~i~~~eIE~~l~~~p~v~~~~vv~ 485 (576)
T PRK05620 409 GAASTFRGEDVEDANDRFTAD--GWLRTGDVGSVTRDGFLTIHDRARDVIRS-GGEWIYSAQLENYIMAAPEVVECAVIG 485 (576)
T ss_pred ccccccccccchhhhcccccC--CcEecCceEEEcCCceEEEEechhhhhhc-CCEEEcHHHHHHHHhcCCCceEEEEEe
Confidence 3333210 34 89999999999999999999999999996 699999999999999999999999999
Q ss_pred cCCCc---eEEEEEEcChHHHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCCCCCC
Q 004977 617 DPFHN---YCVALVVPSHKALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEPWTPE 693 (721)
Q Consensus 617 ~~~~~---~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~~~p~ 693 (721)
.++.. .++|++++.++. ..+ +...++|+++++ ++|++|++|+.|++++++ |
T Consensus 486 ~~~~~~g~~~~a~v~~~~~~----------~~~------------~~~~~~l~~~l~-~~L~~~~~P~~i~~v~~~--P- 539 (576)
T PRK05620 486 YPDDKWGERPLAVTVLAPGI----------EPT------------RETAERLRDQLR-DRLPNWMLPEYWTFVDEI--D- 539 (576)
T ss_pred ccCCCcCceeEEEEEecCCC----------Ccc------------cccHHHHHHHHH-hhCccccCCeEEEEeccC--C-
Confidence 88754 578888776532 000 011367888888 899999999999999988 6
Q ss_pred CCccCcccccChHHHHHHHHH
Q 004977 694 AGLVTAALKIKREQLKAKFKD 714 (721)
Q Consensus 694 ~~~~t~~gKi~R~~l~~~~~~ 714 (721)
+|++||++|++|++++++
T Consensus 540 ---~t~~GKv~r~~L~~~~~~ 557 (576)
T PRK05620 540 ---KTSVGKFDKKDLRQHLAD 557 (576)
T ss_pred ---CCCcccCcHHHHHHHHhc
Confidence 999999999999999885
No 60
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=100.00 E-value=4.1e-66 Score=582.71 Aligned_cols=494 Identities=21% Similarity=0.302 Sum_probs=398.3
Q ss_pred CCCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEE
Q 004977 81 ASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAI 160 (721)
Q Consensus 81 ~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i 160 (721)
..|+.++|+++++++|+++|+++ +++ .+||+||.++++++|..|.+.|+++|++|++
T Consensus 22 ~~~l~~~~~~~a~~~p~~~a~~~------------~~~-----------~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i 78 (527)
T TIGR02275 22 DKPLTDILRDQAARYPDAIAIIC------------GNR-----------QWSYRELDQRADNLAAGLTKLGIGQGDTAVV 78 (527)
T ss_pred CCcHHHHHHHHHHHCCCceEEEe------------CCc-----------eecHHHHHHHHHHHHHHHHHcCCCCCCEEEE
Confidence 46899999999999999999975 333 6999999999999999999999999999999
Q ss_pred EccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccch-----hHHHhhhhcCCCccEEEEecCC
Q 004977 161 LAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQL-----KKLSAVSSSLKTIKNVIYFEND 235 (721)
Q Consensus 161 ~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~-----~~~~~~~~~~~~~~~ii~~~~~ 235 (721)
+++|+++|+++++||+++|++++++++..+.+++.++++.+++++++++.... +.........+.++.++.....
T Consensus 79 ~~~~~~~~~~~~la~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (527)
T TIGR02275 79 QLPNIAEFYIVFFALLKLGIAPVLALFSHRKSELTAYAQQIEPALYIIDRAHSLFDYDAFARQLQSKLPTLRNIIVAGQT 158 (527)
T ss_pred ECCCcHHHHHHHHHHHHcCeEEeccccccCHHHHHHHHHhcCCcEEEEcCcccccchHHHHHHHHhhCCcceEEEEecCC
Confidence 99999999999999999999999999999999999999999999999987642 1222233334555555553321
Q ss_pred CCCccCCccCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHHHHHHHhhCCCCC
Q 004977 236 GSEKDSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNPG 315 (721)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~ 315 (721)
... .......... ..........++++|+|+|||||||.||||++||+++...+......+ .++
T Consensus 159 ~~~--------------~~~~~~~~~~-~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~-~~~ 222 (527)
T TIGR02275 159 RVE--------------AELFLWLESP-AEPVKFPPTKSDEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEIC-WLT 222 (527)
T ss_pred CCc--------------chhhHHhhCc-CccccCCCCCCCccEEEEeCCCCCCCCceeeeehHHHHHHHHHHHhhc-CCC
Confidence 100 0011111111 111112345678999999999999999999999999999988887777 889
Q ss_pred CCcEEEeccChHHHHHHHH--HHHHHHhcceEeeCccccccccchhhccCccCcceeecceEEeechHHHHHHHHHHHHH
Q 004977 316 RSDVYLAYLPLAHVLELAA--ESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKK 393 (721)
Q Consensus 316 ~~d~~l~~~pl~h~~g~~~--~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~ 393 (721)
++|++++.+|++|.+++.. .+.++..|+++++.+.... ..++..++++++|++.++|++++.+.+.....
T Consensus 223 ~~d~~l~~~P~~h~~~~~~~~~~~~l~~G~~~v~~~~~~~--------~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~ 294 (527)
T TIGR02275 223 QQTRYLCALPAAHNYPLSSPGALGVFYAGGCVVLAPDPSP--------TDCFPLIERHKVTVTALVPPAVALWMQAASKS 294 (527)
T ss_pred cCCEEEECCChHhhhhhhHHHHHHHHhcCCeEEECCCCCH--------HHHHHHHHHhCCeEEEecHHHHHHHHhCcccc
Confidence 9999999999999999864 6778899999988432211 11233389999999999999998876532110
Q ss_pred HHhhcchhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHHHHHHHhhCCcc
Q 004977 394 VEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMGAPI 473 (721)
Q Consensus 394 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~~~~~~g~~l 473 (721)
....+++|.+++||+++++++.+.+.+.+|+++
T Consensus 295 -----------------------------------------------~~~~~~lr~~~~gG~~l~~~~~~~~~~~~g~~~ 327 (527)
T TIGR02275 295 -----------------------------------------------RYDLSSLKLLQVGGAKFSEAAARRVPAVFGCQL 327 (527)
T ss_pred -----------------------------------------------CCCccceEEEEEcCCCCCHHHHHHHHHHhCCeE
Confidence 001248999999999999999999998889999
Q ss_pred ccccccccccccccccC-CCCCCCCccCCCc-CcceEEEEecCCCCcccCCCCCCcceEEEccccccccccCCCcccccc
Q 004977 474 GQAYGLTETCAGSTFSE-WDDPSVGRVGPPV-PCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEV 551 (721)
Q Consensus 474 ~~~YG~TE~~~~~~~~~-~~~~~~~~vG~p~-p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~ 551 (721)
++.||+||++...+... ......+++|+|+ ++++++|+| ++++.+ ++|+.|||+++|++++.||+++++.|.+.
T Consensus 328 ~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~v~i~d-~~g~~~---~~g~~Gei~v~g~~~~~gY~~~~~~~~~~ 403 (527)
T TIGR02275 328 QQVFGMAEGLVNYTRLDDPAEIIFTTQGRPMSPDDEVRVVD-DHGNPV---APGETGMLLTRGPYTFRGYYKAPEHNAAA 403 (527)
T ss_pred EeeeccCccCccccCCCCccccccccCCCCCCCCceEEEEC-CCCCCC---CCCCceEEEecCCccchhhcCChhHhHhh
Confidence 99999999764433221 1223347899999 589999999 566544 47899999999999999999999999998
Q ss_pred cccCCCCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcccceEEEEecCCC---ceEEEEEE
Q 004977 552 YKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYVDNIMIHADPFH---NYCVALVV 628 (721)
Q Consensus 552 f~~~~~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~~a~vv 628 (721)
|. .+ |||+|||+|++++||+++++||.||+||+ +|++|+|.+||++|.+||+|.+++|++.++. +.++|+|+
T Consensus 404 ~~--~d--g~~~TGDl~~~~~~g~l~~~gR~~d~i~~-~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~~~~~~~~~a~vv 478 (527)
T TIGR02275 404 FD--AE--GFYYTGDLVRLTPEGYIVVVGRAKDQINR-GGEKIAAEEIENLLLAHPAVHDAALVSMPDELLGEKSCAFIV 478 (527)
T ss_pred cC--cC--CCEEcCceEEEcCCccEEEEecccceeec-CCEEECHHHHHHHHHhCCCceEEEEEecCCcccccEEEEEEE
Confidence 86 56 89999999999999999999999999996 6999999999999999999999999999876 35889988
Q ss_pred cChHHHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCCCCCCCCccCcccccChHHH
Q 004977 629 PSHKALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEPWTPEAGLVTAALKIKREQL 708 (721)
Q Consensus 629 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~~~p~~~~~t~~gKi~R~~l 708 (721)
++++.. ..++|++++++.+++.|++|..+++++++ | +|++||++|++|
T Consensus 479 ~~~~~~--------------------------~~~~l~~~l~~~~l~~~~~P~~i~~v~~i--P----~t~sGKv~r~~L 526 (527)
T TIGR02275 479 VRDPAL--------------------------KAAQLRRFLRERGLAEYKLPDRVEFIDSL--P----LTAVGKIDKKAL 526 (527)
T ss_pred ECCCCC--------------------------CHHHHHHHHHhCCCccccCCCEEEEeccC--C----CCCccceeHHhc
Confidence 765310 02578888873459999999999999987 6 999999999987
Q ss_pred H
Q 004977 709 K 709 (721)
Q Consensus 709 ~ 709 (721)
+
T Consensus 527 ~ 527 (527)
T TIGR02275 527 R 527 (527)
T ss_pred C
Confidence 4
No 61
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=100.00 E-value=6.2e-66 Score=582.80 Aligned_cols=495 Identities=24% Similarity=0.326 Sum_probs=399.0
Q ss_pred CCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEE
Q 004977 82 STMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAIL 161 (721)
Q Consensus 82 ~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~ 161 (721)
.|+.++|+++++.+|+++|++..+ +. .+.++.+||+||+++++++|.+|.+.|+++|++|+++
T Consensus 22 ~~~~~~~~~~~~~~p~~~a~~~~~----------~~-------~~~~~~~Ty~eL~~~~~~~a~~L~~~g~~~g~~V~i~ 84 (538)
T TIGR03208 22 RTINDHFDAAVANCPDKPALTAYR----------DG-------HGAVRRFSYRELDCRVDRIAVGLARLGVGRGDVVSFQ 84 (538)
T ss_pred CcHHHHHHHHHHHCCCceEEEeec----------cc-------CCCcceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEE
Confidence 689999999999999999997531 11 1223579999999999999999999999999999999
Q ss_pred ccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccch-----hHHHhhhhcCCCccEEEEecCCC
Q 004977 162 AETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQL-----KKLSAVSSSLKTIKNVIYFENDG 236 (721)
Q Consensus 162 ~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~-----~~~~~~~~~~~~~~~ii~~~~~~ 236 (721)
++|+++++++++||+++|++++|+++.++.+++.++++.++++++|+++... ..+......++..+.++..+...
T Consensus 85 ~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (538)
T TIGR03208 85 LPNRWEFTALYLACARIGAVLNPLMPIFRERELSFMLNHADSKVFVVPSVFRGFDHAAMARELQSKLPALRQVVVIDGDG 164 (538)
T ss_pred CCCCHHHHHHHHHHHhcCEEEeccCcccCHHHHHHHHHhcCCeEEEEccccccccHHHHHHHHhccCCcceEEEEecCCC
Confidence 9999999999999999999999999999999999999999999999987642 22333334455556666654321
Q ss_pred CCccCCccCCCCCceEeeHHHHHhcCCCCC-------CCCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHHHHHHHh
Q 004977 237 SEKDSGVSGGISNWTVSSFSEVEKLGKRSP-------VDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKT 309 (721)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~ 309 (721)
. ..++.+........ .......++++++|+|||||||.||||+++|+++...+.....
T Consensus 165 ~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~ 229 (538)
T TIGR03208 165 D---------------DSFDRVLMTPERDDTPDAAAILAGPRPSPDDVTQLIYTSGTTGEPKGVMHTANTLFSNIHPYAE 229 (538)
T ss_pred C---------------cCHHHHhhccccccccccccccccCCCCCCCeEEEEECCCCCCCCcEEEeehHHHHHHHHHHHh
Confidence 1 12222221111000 0112346789999999999999999999999999999888888
Q ss_pred hCCCCCCCcEEEeccChHHHHHHHH-HHHHHHhcceEeeCc---cccccccchhhccCccCcceeecceEEeechHHHHH
Q 004977 310 LIPNPGRSDVYLAYLPLAHVLELAA-ESIMLCAGCAIGYGS---TLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDR 385 (721)
Q Consensus 310 ~~~~~~~~d~~l~~~pl~h~~g~~~-~~~~l~~G~~~~~~~---~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~ 385 (721)
.+ .+..+|++++++|++|.+++.. .+.++..|+++++.+ +..+.+. ++++++|++.++|+++..
T Consensus 230 ~~-~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~-----------l~~~~vt~~~~~p~~~~~ 297 (538)
T TIGR03208 230 RL-ELGGGDVILMASPMAHQTGFMYGLMMPLILNATAVLQDIWNPARAAEL-----------IRETGVTFTMASTPFLTD 297 (538)
T ss_pred hc-CCCCCCeEEEeCCchhHHHHHHHHHHHHHcCCEEEecCccCHHHHHHH-----------HHHhCCeEEecCHHHHHH
Confidence 77 8889999999999999988755 677899999988743 3333333 999999999999999988
Q ss_pred HHHHHHHHHHhhcchhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHHHHH
Q 004977 386 VREGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFI 465 (721)
Q Consensus 386 l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~~ 465 (721)
+....... ....+++|.+++||+++++++.+++
T Consensus 298 l~~~~~~~-----------------------------------------------~~~~~~l~~~~~gG~~~~~~~~~~~ 330 (538)
T TIGR03208 298 LCRAVKES-----------------------------------------------GAPVPSLFTFLCAGAPIPGILVERA 330 (538)
T ss_pred HHhchhcc-----------------------------------------------CCCCCcceEEEEcCCCCCHHHHHHH
Confidence 76532110 0012489999999999999999988
Q ss_pred HHhhCCccccccccccccccccccCCCC--CCCCccCCCcCcceEEEEecCCCCcccCCCCCCcceEEEccccccccccC
Q 004977 466 NICMGAPIGQAYGLTETCAGSTFSEWDD--PSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFN 543 (721)
Q Consensus 466 ~~~~g~~l~~~YG~TE~~~~~~~~~~~~--~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~ 543 (721)
.+.+|++++|.||+||++.+.+...... ....++|+|+|+++++|+| +++..+ ++|+.|||+|+|++++.||++
T Consensus 331 ~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~g~~v~i~~-~~~~~~---~~g~~Gel~v~g~~~~~gy~~ 406 (538)
T TIGR03208 331 WELLGALIVSAWGMTENGAVTVTEPDDALEKASTTDGRPLPGVEVKVID-ANGAKL---SQGETGRLLVRGCSNFGGYLK 406 (538)
T ss_pred HHHcCCeEEeeeccCcCCCccccCcccchhhccCcccccCCCCEEEEEC-CCCCCC---cCCCCcEEEEecCcccccccC
Confidence 8888999999999999987765443221 1236899999999999999 556543 478999999999999999999
Q ss_pred CCcccccccccCCCCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcccceEEEEecCCC---
Q 004977 544 NPGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYVDNIMIHADPFH--- 620 (721)
Q Consensus 544 ~~~~t~~~f~~~~~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~--- 620 (721)
+|+.|.. . .+ |||+|||+|++|++|+|+++||.||+||+ +|++|+|.+||++|.+||+|.+++|++.+++
T Consensus 407 ~~~~~~~--~--~~--~~~~TGD~~~~~~~g~l~~~gR~~~~i~~-~G~~v~p~eIE~~l~~~~~v~~~~v~~~~~~~~g 479 (538)
T TIGR03208 407 RPHLNST--D--AE--GWFDTGDLAFQDAEGYIRINGRSKDVIIR-GGENIPVVEIENLLYQHPAVAQVAIVAYPDERLG 479 (538)
T ss_pred Ccccccc--c--CC--CceeccceEEECCCCcEEEEeccCceEEE-CCEEECHHHHHHHHhcCcceeeEEEEeccCCCCC
Confidence 9988753 2 45 89999999999999999999999999996 6999999999999999999999999998765
Q ss_pred ceEEEEEEcChHHHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCCCCCCCCccCcc
Q 004977 621 NYCVALVVPSHKALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEPWTPEAGLVTAA 700 (721)
Q Consensus 621 ~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~~~p~~~~~t~~ 700 (721)
+.++|+|++.++. ..+ .+++++++++.+++.|++|+.+++++++ | +|++
T Consensus 480 ~~~~a~v~~~~~~--------~~~-----------------~~~l~~~~~~~~l~~~~~P~~i~~v~~i--P----~t~~ 528 (538)
T TIGR03208 480 ERACAVVVPKPGC--------TLD-----------------FAAMVAFLKAQKVALQYIPERLEVVDAL--P----ATPA 528 (538)
T ss_pred ceEEEEEEECCCC--------CCC-----------------HHHHHHHHHhcchhhccCCcEEEEeccC--C----CCCc
Confidence 3588999876531 000 2567777763479999999999999988 6 9999
Q ss_pred cccChHHHH
Q 004977 701 LKIKREQLK 709 (721)
Q Consensus 701 gKi~R~~l~ 709 (721)
||++|++|+
T Consensus 529 gKv~r~~L~ 537 (538)
T TIGR03208 529 GKIQKFRLR 537 (538)
T ss_pred cccchHhhc
Confidence 999999986
No 62
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=6.1e-66 Score=587.39 Aligned_cols=516 Identities=22% Similarity=0.329 Sum_probs=409.3
Q ss_pred CCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEE
Q 004977 82 STMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAIL 161 (721)
Q Consensus 82 ~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~ 161 (721)
.|+.++|+++++++|+++|+.+ +++ .+||+||.++++++|++|.+.|+++||+|+++
T Consensus 32 ~~l~~~~~~~~~~~p~~~a~~~------------~~~-----------~~Ty~ql~~~~~~~A~~L~~~gi~~gd~V~l~ 88 (573)
T PRK05605 32 TTLVDLYDNAVARFGDRPALDF------------FGA-----------TTTYAELGKQVRRAAAGLRALGVRPGDRVAIV 88 (573)
T ss_pred CCHHHHHHHHHHHCCCCeEEEe------------CCC-----------cccHHHHHHHHHHHHHHHHHhCCCCCCEEEEE
Confidence 5899999999999999999986 443 59999999999999999999999999999999
Q ss_pred ccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccchhHHHhhhhcCCCccEEEEecCCCCCc--
Q 004977 162 AETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEK-- 239 (721)
Q Consensus 162 ~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~-- 239 (721)
++|+++|+++++||+++|++++|++|.++.+++.+++++++++++|+++.....+..+.... .++.++..+......
T Consensus 89 ~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~ 167 (573)
T PRK05605 89 LPNCPQHIVAFYAVLRLGAVVVEHNPLYTAHELEHPFEDHGARVAIVWDKVAPTVERLRRTT-PLETIVSVNMIAAMPLL 167 (573)
T ss_pred CCCCHHHHHHHHHHHhcCcEEeecCcCCCHHHHHHHHhccCCcEEEechhhHHHHHhhhhcc-ccceeEeeecccccccc
Confidence 99999999999999999999999999999999999999999999999887766555443322 233344432111000
Q ss_pred c--------CCcc-----CCCCCceEeeHHHHHhcCCCCC---CCCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHH
Q 004977 240 D--------SGVS-----GGISNWTVSSFSEVEKLGKRSP---VDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVAT 303 (721)
Q Consensus 240 ~--------~~~~-----~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~ 303 (721)
. ..+. .........+|+++........ .......++++++++|||||||.||+|++||+++...
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~ 247 (573)
T PRK05605 168 QRLALRLPIPALRKARAALTGPAPGTVPWETLVDAAIGGDGSDVSHPRPTPDDVALILYTSGTTGKPKGAQLTHRNLFAN 247 (573)
T ss_pred cccccccccccccccccccccCCCcceeHHHHhhccccccccccCCCCCCCCCEEEEEcCCCCCCCCcEEEEecHHHHHH
Confidence 0 0000 0001123345666654322110 1123356789999999999999999999999999888
Q ss_pred HHHHHhhCCCC-CCCcEEEeccChHHHHHHHH-HHHHHHhcceEeeCccccccccchhhccCccCcceeecceEEeechH
Q 004977 304 AAAIKTLIPNP-GRSDVYLAYLPLAHVLELAA-ESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPA 381 (721)
Q Consensus 304 ~~~~~~~~~~~-~~~d~~l~~~pl~h~~g~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~ 381 (721)
+......+..+ ..++++++.+|++|.+|+.. .+.++..|+++++.+... ...++..++++++|++.++|+
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~--------~~~~~~~l~~~~~t~~~~~P~ 319 (573)
T PRK05605 248 AAQGKAWVPGLGDGPERVLAALPMFHAYGLTLCLTLAVSIGGELVLLPAPD--------IDLILDAMKKHPPTWLPGVPP 319 (573)
T ss_pred HHHHHhhccccCCCCcEEEEecChHHHHHHHHHHHHHHHcCCEEEEeCCCC--------HHHHHHHHHHhCCEEEEchHH
Confidence 76554443222 34789999999999999765 556788999988843221 122333389999999999999
Q ss_pred HHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHH
Q 004977 382 IFDRVREGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADS 461 (721)
Q Consensus 382 ~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~ 461 (721)
+++.+.+..... ....+++|.+++||+++++++
T Consensus 320 ~~~~l~~~~~~~-----------------------------------------------~~~~~~lr~i~~gg~~l~~~~ 352 (573)
T PRK05605 320 LYEKIAEAAEER-----------------------------------------------GVDLSGVRNAFSGAMALPVST 352 (573)
T ss_pred HHHHHHhCcccc-----------------------------------------------CCCchhccEEEECCCcCCHHH
Confidence 999987632110 001147999999999999999
Q ss_pred HHHHHHhhCCccccccccccccccccccCCC-CCCCCccCCCcCcceEEEEecCC-CCcccCCCCCCcceEEEccccccc
Q 004977 462 QRFINICMGAPIGQAYGLTETCAGSTFSEWD-DPSVGRVGPPVPCCYIKLVSWDE-GGYKTSDKPMPRGEIVVGGFNVTA 539 (721)
Q Consensus 462 ~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~-~~~~~~vG~p~p~~~v~i~d~~~-~~~~~~~~~g~~GEl~v~g~~v~~ 539 (721)
.+.+.+.++.++++.||+||++.+++..... ....+++|+|+|++.++|+|+++ +.. ++.|+.|||+++|+.++.
T Consensus 353 ~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~---~~~g~~Gel~v~~~~~~~ 429 (573)
T PRK05605 353 VELWEKLTGGLLVEGYGLTETSPIIVGNPMSDDRRPGYVGVPFPDTEVRIVDPEDPDET---MPDGEEGELLVRGPQVFK 429 (573)
T ss_pred HHHHHHHhCCCeecccccchhchhhhcCCcccCCcCCccccCCCCCEEEEEcCCCCCcc---CCCCCeeEEEEecCchhh
Confidence 9999888899999999999999776655433 23457999999999999999554 333 457889999999999999
Q ss_pred cccCCCcccccccccCCCCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcccceEEEEecCC
Q 004977 540 GYFNNPGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYVDNIMIHADPF 619 (721)
Q Consensus 540 gY~~~~~~t~~~f~~~~~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~ 619 (721)
||+++++.|.+.| .+ |||+|||+|++|++|+++|+||.||+||+ +|++|+|.+||+++.+|+.|.+++|++.++
T Consensus 430 gy~~~~~~~~~~~---~~--g~~~TGD~~~~~~~g~l~i~gR~dd~i~~-~G~~v~p~eIE~~l~~~~~i~~~~v~~~~~ 503 (573)
T PRK05605 430 GYWNRPEETAKSF---LD--GWFRTGDVVVMEEDGFIRIVDRIKELIIT-GGFNVYPAEVEEVLREHPGVEDAAVVGLPR 503 (573)
T ss_pred hhcCChhHhhhcc---cC--CCcccCCEEEEcCCCcEEEEeccccceee-CCEEECHHHHHHHHHhCcccceEEEEeeec
Confidence 9999999999988 56 79999999999999999999999999996 799999999999999999999999999865
Q ss_pred C---ceEEEEEEcChHHHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCCCCCCCCc
Q 004977 620 H---NYCVALVVPSHKALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEPWTPEAGL 696 (721)
Q Consensus 620 ~---~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~~~p~~~~ 696 (721)
. +.++++|++.++. ..+ .++|+++++ .+|+.|++|..|++++++ |
T Consensus 504 ~~~~~~~~~~vv~~~~~----------~~~---------------~~~l~~~~~-~~l~~~~~p~~i~~~~~i--P---- 551 (573)
T PRK05605 504 EDGSEEVVAAVVLEPGA----------ALD---------------PEGLRAYCR-EHLTRYKVPRRFYHVDEL--P---- 551 (573)
T ss_pred ccCCeEEEEEEEECCCC----------CCC---------------HHHHHHHHH-HhCccccCCcEEEEeccC--C----
Confidence 4 4688888876532 000 267888888 899999999999999887 6
Q ss_pred cCcccccChHHHHHHHHHHHH
Q 004977 697 VTAALKIKREQLKAKFKDDLQ 717 (721)
Q Consensus 697 ~t~~gKi~R~~l~~~~~~~i~ 717 (721)
+|++||++|++|++++.+++.
T Consensus 552 ~t~~GKi~r~~L~~~~~~~~~ 572 (573)
T PRK05605 552 RDQLGKVRRREVREELLEKLG 572 (573)
T ss_pred CCCcccccHHHHHHHHHHHhc
Confidence 999999999999999987653
No 63
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=8.6e-66 Score=581.23 Aligned_cols=509 Identities=21% Similarity=0.266 Sum_probs=406.7
Q ss_pred CCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEE
Q 004977 82 STMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAIL 161 (721)
Q Consensus 82 ~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~ 161 (721)
.++.++|++.++++|++.++.++. +| +++.+||.||.++++++|++|.+.|+++||+|+++
T Consensus 10 ~~~~~~l~~~~~~~~~~~~~~~~~----------~~---------~~~~~Ty~el~~~~~~~a~~L~~~g~~~~d~v~i~ 70 (539)
T PRK07008 10 LLISSLIAHAARHAGDTEIVSRRV----------EG---------DIHRYTYRDCERRAKQLAQALAALGVEPGDRVGTL 70 (539)
T ss_pred CCHHHHHHHHHhhCCCceEEEeec----------cC---------cceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEE
Confidence 579999999999999998886531 22 23469999999999999999999999999999999
Q ss_pred ccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccchhHHHhhhhcCCCccEEEEecCCCCCccC
Q 004977 162 AETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEKDS 241 (721)
Q Consensus 162 ~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~ 241 (721)
++|+++|+++++||+++|++++|+++.++++++.++++.+++++++++.+..+.+.++...++.++.++.........
T Consensus 71 ~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 148 (539)
T PRK07008 71 AWNGYRHLEAYYGVSGSGAVCHTINPRLFPEQIAYIVNHAEDRYVLFDLTFLPLVDALAPQCPNVKGWVAMTDAAHLP-- 148 (539)
T ss_pred cCCcHHHHHHHHHHHhcCcEEeecccccCHHHHHHHHhccCCcEEEEcchhHHHHHHHHhhCCCceEEEEEccCCccc--
Confidence 999999999999999999999999999999999999999999999999888777777666667776666654332110
Q ss_pred CccCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHHHHH--HHhhCCCCCCCcE
Q 004977 242 GVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAA--IKTLIPNPGRSDV 319 (721)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~--~~~~~~~~~~~d~ 319 (721)
. ....+.+++++........ ......++++++++|||||||.||||++||++++..... ....+ ++.++|+
T Consensus 149 ---~--~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~-~~~~~d~ 221 (539)
T PRK07008 149 ---A--GSTPLLCYETLVGAQDGDY-DWPRFDENQASSLCYTSGTTGNPKGALYSHRSTVLHAYGAALPDAM-GLSARDA 221 (539)
T ss_pred ---c--CCcccccHHHHhcccCCCc-CcccCCcccceEEEECCCCCCCCcEEEEecHHHHHHHHHhhccccc-CCCCCce
Confidence 0 1133566777654332211 123456788999999999999999999999998754332 22345 7888999
Q ss_pred EEeccChHHHHHHHHHHHHHHhcceEeeCccccccccchhhccCccCcceeecceEEeechHHHHHHHHHHHHHHHhhcc
Q 004977 320 YLAYLPLAHVLELAAESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKGG 399 (721)
Q Consensus 320 ~l~~~pl~h~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~ 399 (721)
+++.+|++|..++...+.++..|+++++.++.. + ...++..++++++|++.++|+++..+.+.....
T Consensus 222 ~l~~~p~~h~~~~~~~~~~l~~G~~~~~~~~~~--~-----~~~~~~~l~~~~vt~~~~~P~~~~~l~~~~~~~------ 288 (539)
T PRK07008 222 VLPVVPMFHVNAWGLPYSAPLTGAKLVLPGPDL--D-----GKSLYELIEAERVTFSAGVPTVWLGLLNHMREA------ 288 (539)
T ss_pred EEecCchHHhhhHHHHHHHHhcCceEEEecCCc--C-----HHHHHHHHHHcCCEEEEechHHHHHHHhccccc------
Confidence 999999999888766677889999998853321 1 122333489999999999999999887532110
Q ss_pred hhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHHHHHHHhhCCcccccccc
Q 004977 400 LTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMGAPIGQAYGL 479 (721)
Q Consensus 400 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~~~~~~g~~l~~~YG~ 479 (721)
....+++|.+++||+++++++.+.+.+.+|+++++.||+
T Consensus 289 -----------------------------------------~~~~~~l~~~~~~G~~l~~~~~~~~~~~~~~~l~~~YG~ 327 (539)
T PRK07008 289 -----------------------------------------GLRFSTLRRTVIGGSACPPAMIRTFEDEYGVEVIHAWGM 327 (539)
T ss_pred -----------------------------------------CCCcccceEEEEcCCCCCHHHHHHHHHHhCCceeccccc
Confidence 001258999999999999999999988899999999999
Q ss_pred ccccccccccCCCC-----------CCCCccCCCcCcceEEEEecCCCCcccCCCCCCcceEEEccccccccccCCCccc
Q 004977 480 TETCAGSTFSEWDD-----------PSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKT 548 (721)
Q Consensus 480 TE~~~~~~~~~~~~-----------~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t 548 (721)
||++..++...... ....++|+|+|+++++|+| +++..++ ...++.|||+++|++++.||+++++
T Consensus 328 tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~pg~~~~i~d-~~~~~~~-~~~~~~Gei~v~g~~~~~gy~~~~~-- 403 (539)
T PRK07008 328 TEMSPLGTLCKLKWKHSQLPLDEQRKLLEKQGRVIYGVDMKIVG-DDGRELP-WDGKAFGDLQVRGPWVIDRYFRGDA-- 403 (539)
T ss_pred ccccccceecccccccccCCchhhhhhcccCCccccceEEEEEC-CCCCccC-CCCCcceEEEEeCCccchhhcCChh--
Confidence 99987654332110 1136899999999999999 5565443 1223579999999999999999983
Q ss_pred ccccccCCCCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcccceEEEEecCCCc---eEEE
Q 004977 549 SEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYVDNIMIHADPFHN---YCVA 625 (721)
Q Consensus 549 ~~~f~~~~~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~~---~~~a 625 (721)
..+ .+ |||+|||+|++|+||+++++||.||+||. +|++|+|.|||+++.+||.|.+++|++.++.. .+++
T Consensus 404 -~~~---~~--g~~~TGD~~~~~~dg~l~~~GR~~d~i~~-~G~~v~p~eIE~~l~~~p~v~~~~v~~~~~~~~~~~~~~ 476 (539)
T PRK07008 404 -SPL---VD--GWFPTGDVATIDADGFMQITDRSKDVIKS-GGEWISSIDIENVAVAHPAVAEAACIACAHPKWDERPLL 476 (539)
T ss_pred -hhh---cC--CCcccCceEEEcCCCcEEEeecccCEEEe-CCeEEcHHHHHHHHHhCCceeEEEEEecCCchhccceEE
Confidence 334 35 89999999999999999999999999996 69999999999999999999999999988753 4777
Q ss_pred EEEcChHHHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCCCCCCCCccCcccccCh
Q 004977 626 LVVPSHKALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEPWTPEAGLVTAALKIKR 705 (721)
Q Consensus 626 ~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~~~p~~~~~t~~gKi~R 705 (721)
+|+..++.. . ..++++++++ ++|++|++|+.|++++.+ | +|++||++|
T Consensus 477 ~v~~~~~~~--------~-----------------~~~~l~~~~~-~~l~~~~~P~~i~~v~~l--P----~t~sgKi~r 524 (539)
T PRK07008 477 VVVKRPGAE--------V-----------------TREELLAFYE-GKVAKWWIPDDVVFVDAI--P----HTATGKLQK 524 (539)
T ss_pred EEEeCCCCc--------c-----------------CHHHHHHHHH-hhcccccCCeEEEEecCC--C----CCCccceeH
Confidence 777654320 0 0267888888 899999999999999988 6 999999999
Q ss_pred HHHHHHHHHH
Q 004977 706 EQLKAKFKDD 715 (721)
Q Consensus 706 ~~l~~~~~~~ 715 (721)
++|++++++-
T Consensus 525 ~~l~~~~~~~ 534 (539)
T PRK07008 525 LKLREQFRDY 534 (539)
T ss_pred HHHHHHHHhh
Confidence 9999988763
No 64
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.5e-65 Score=580.02 Aligned_cols=505 Identities=21% Similarity=0.262 Sum_probs=417.3
Q ss_pred CCCCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEE
Q 004977 80 GASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAA 159 (721)
Q Consensus 80 ~~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~ 159 (721)
...++.+.++++++++|+++|+.+ +++ .+||.||.++++++|++|.+.|+++|++|+
T Consensus 15 ~~~n~~~~~~~~a~~~~~~~a~~~------------~~~-----------~~ty~~l~~~~~~~a~~L~~~g~~~g~~V~ 71 (542)
T PRK07786 15 RRQNWVNQLARHALMQPDAPALRF------------LGN-----------TTTWRELDDRVAALAGALSRRGVGFGDRVL 71 (542)
T ss_pred cccCHHHHHHHHHHHCCCCeEEEe------------CCC-----------cccHHHHHHHHHHHHHHHHHcCCCCCCEEE
Confidence 347899999999999999999986 333 599999999999999999999999999999
Q ss_pred EEccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccchhHHHhhhhcCCCccEEEEecCCCCCc
Q 004977 160 ILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEK 239 (721)
Q Consensus 160 i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~ 239 (721)
|+++|+++|+++++||+++|++++|+++.++.+++.++++++++++++++......+.......+.++.++.+++...
T Consensus 72 i~~~~~~~~~~~~~a~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 149 (542)
T PRK07786 72 ILMLNRTEFVESVLAANMLGAIAVPVNFRLTPPEIAFLVSDCGAHVVVTEAALAPVATAVRDIVPLLSTVVVAGGSSD-- 149 (542)
T ss_pred EECCCCHHHHHHHHHHHHcCeEEEEcCccCCHHHHHHHHHhCCCcEEEEccchHHHHHHhhhccCccceEEEecCCCc--
Confidence 999999999999999999999999999999999999999999999999998877766666555666777776553211
Q ss_pred cCCccCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHHHHHHHhhCCCC-CCCc
Q 004977 240 DSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNP-GRSD 318 (721)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~-~~~d 318 (721)
....+++++....... ........+++++++|||||||.||||++||+++...+......+ ++ ..++
T Consensus 150 ----------~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~-~~~~~~~ 217 (542)
T PRK07786 150 ----------DSVLGYEDLLAEAGPA-HAPVDIPNDSPALIMYTSGTTGRPKGAVLTHANLTGQAMTCLRTN-GADINSD 217 (542)
T ss_pred ----------ccccCHHHHhhccCCC-CCCCCCCCCCeEEEEeCCCCCccchhhhhhHHHHHHHHHHHHHhc-CCCCCCc
Confidence 1224566665433222 122334567899999999999999999999999999888877776 55 6789
Q ss_pred EEEeccChHHHHHHHHHHHHHHhcceEeeCccccccccchhhccCccCcceeecceEEeechHHHHHHHHHHHHHHHhhc
Q 004977 319 VYLAYLPLAHVLELAAESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKG 398 (721)
Q Consensus 319 ~~l~~~pl~h~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~ 398 (721)
++++.+|++|.+|+...+.++..|+++++.+...+ + +..++..++++++|.++++|++++.+........
T Consensus 218 ~~~~~~p~~~~~g~~~~~~~l~~G~~~v~~~~~~~-~-----~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~---- 287 (542)
T PRK07786 218 VGFVGVPLFHIAGIGSMLPGLLLGAPTVIYPLGAF-D-----PGQLLDVLEAEKVTGIFLVPAQWQAVCAEQQARP---- 287 (542)
T ss_pred eEEEecchHHHHHHHHHHHHHHccCEEEEccCCCc-C-----HHHHHHHHHHcCCeEEEehHHHHHHHHhCcccCc----
Confidence 99999999999999888889999999988432211 1 2223444999999999999999999875321000
Q ss_pred chhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHHHHHHHhh-CCcccccc
Q 004977 399 GLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICM-GAPIGQAY 477 (721)
Q Consensus 399 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~~~~~~-g~~l~~~Y 477 (721)
...++|.+++||+++++++.+.+.+.+ +.++++.|
T Consensus 288 --------------------------------------------~~~~lr~i~~gg~~~~~~~~~~~~~~~~~~~l~~~Y 323 (542)
T PRK07786 288 --------------------------------------------RDLALRVLSWGAAPASDTLLRQMAATFPEAQILAAF 323 (542)
T ss_pred --------------------------------------------cCcceEEEEECCCCCCHHHHHHHHHHcCCCeEEeee
Confidence 002689999999999999999888877 78999999
Q ss_pred ccccccccccccCCCC--CCCCccCCCcCcceEEEEecCCCCcccCCCCCCcceEEEccccccccccCCCcccccccccC
Q 004977 478 GLTETCAGSTFSEWDD--PSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVD 555 (721)
Q Consensus 478 G~TE~~~~~~~~~~~~--~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~ 555 (721)
|+||++.+.+...... ...+++|+|+|++.++|+| +++..+ +.|+.|||+++|+.++.||+++++.|.+.|
T Consensus 324 G~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d-~~~~~~---~~g~~Gel~v~g~~~~~gy~~~~~~~~~~f--- 396 (542)
T PRK07786 324 GQTEMSPVTCMLLGEDAIRKLGSVGKVIPTVAARVVD-ENMNDV---PVGEVGEIVYRAPTLMSGYWNNPEATAEAF--- 396 (542)
T ss_pred cccccccceEecCcccccccCCCccccCCCceEEEEC-CCCCCC---cCCCceEEEEEChhhhhhhcCCHHHHHHHh---
Confidence 9999987655433221 2457899999999999999 556543 478999999999999999999999999998
Q ss_pred CCCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcccceEEEEecCCC---ceEEEEEEcChH
Q 004977 556 ERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYVDNIMIHADPFH---NYCVALVVPSHK 632 (721)
Q Consensus 556 ~~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~~a~vv~~~~ 632 (721)
.+ |||+|||+++++++|.++++||.||+||+ +|++|+|.+||++|.+||.|.+++|++.++. +.++++|++...
T Consensus 397 ~~--~~~~TGDl~~~~~~g~~~i~GR~~d~i~~-~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~ 473 (542)
T PRK07786 397 AG--GWFHSGDLVRQDEEGYVWVVDRKKDMIIS-GGENIYCAEVENVLASHPDIVEVAVIGRADEKWGEVPVAVAAVRND 473 (542)
T ss_pred hC--CcccccceEEEcCCceEEEEecccceEEe-CCEEECHHHHHHHHHhCCCccEEEEEeccCcccCceEEEEEEECCC
Confidence 56 89999999999999999999999999997 6999999999999999999999999998765 357888886642
Q ss_pred HHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCCCCCCCCccCcccccChHHHHHHH
Q 004977 633 ALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEPWTPEAGLVTAALKIKREQLKAKF 712 (721)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~~~p~~~~~t~~gKi~R~~l~~~~ 712 (721)
.. + ...++++++++ .++++|++|..+++++++ | +|++||++|++|+++|
T Consensus 474 ~~---------~---------------~~~~~l~~~l~-~~l~~~~~P~~i~~v~~i--P----~t~~GKv~r~~L~~~~ 522 (542)
T PRK07786 474 DA---------A---------------LTLEDLAEFLT-DRLARYKHPKALEIVDAL--P----RNPAGKVLKTELRERY 522 (542)
T ss_pred CC---------C---------------CCHHHHHHHHH-hhccCCCCCCEEEEeccC--C----CCCcccccHHHHHHHH
Confidence 10 0 01267788888 899999999999999987 6 9999999999999999
Q ss_pred HHHH
Q 004977 713 KDDL 716 (721)
Q Consensus 713 ~~~i 716 (721)
.+..
T Consensus 523 ~~~~ 526 (542)
T PRK07786 523 GACV 526 (542)
T ss_pred Hhhh
Confidence 8764
No 65
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=100.00 E-value=5.4e-66 Score=580.98 Aligned_cols=503 Identities=19% Similarity=0.259 Sum_probs=401.3
Q ss_pred CCCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEE
Q 004977 81 ASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAI 160 (721)
Q Consensus 81 ~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i 160 (721)
.+|+.++|++.++++|+++|+.+. |+. ++++.+||+||.++++++|+.|.++|+++||+|++
T Consensus 6 ~~~l~~~~~~~a~~~p~~~a~~~~-----------~~~-------~~~~~~ty~~l~~~v~~la~~L~~~g~~~~~~v~i 67 (517)
T PRK08008 6 GQHLRQMWDDLADVYGHKTALIFE-----------SSG-------GVVRRYSYLELNEEINRTANLFYSLGIRKGDKVAL 67 (517)
T ss_pred cccHHHHHHHHHHHCCCceEEEcc-----------cCC-------CccceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEE
Confidence 468999999999999999999874 221 33467999999999999999999999999999999
Q ss_pred EccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccchhHHHhhhhc-CCCccEEEEecCCCCCc
Q 004977 161 LAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSS-LKTIKNVIYFENDGSEK 239 (721)
Q Consensus 161 ~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~-~~~~~~ii~~~~~~~~~ 239 (721)
+++|+++|+++++||+++|++++|+++.++.+++.+++++++++.+|++++..+.+.++... .+.++.++..+.....
T Consensus 68 ~~~n~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 146 (517)
T PRK08008 68 HLDNCPEFIFCWFGLAKIGAIMVPINARLLREESAWILQNSQASLLVTSAQFYPMYRQIQQEDATPLRHICLTRVALPA- 146 (517)
T ss_pred EcCCCHHHHHHHHHHHHcCeEEEEcCcccCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhccccCcEEEEecCCCcc-
Confidence 99999999999999999999999999999999999999999999999999887777665433 2345555555432111
Q ss_pred cCCccCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHHHHHHHhhCCCCCCCcE
Q 004977 240 DSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNPGRSDV 319 (721)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~d~ 319 (721)
.....+++++...............++++++|+|||||||.||||++||+|+........... .+.++++
T Consensus 147 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~-~~~~~~~ 216 (517)
T PRK08008 147 ---------DDGVSSFTQLKAQQPATLCYAPPLSTDDTAEILFTSGTTSRPKGVVITHYNLRFAGYYSAWQC-ALRDDDV 216 (517)
T ss_pred ---------cccccCHHHHhccCCccccccCCCCCCCeEEEEECCCCCCCCcEEEEehHHHHHHHHHHhhhc-CCCCCCe
Confidence 112334555433222111112334578999999999999999999999999986654333333 6788999
Q ss_pred EEeccChHHHHHHHH-HHHHHHhcceEeeCccccccccchhhccCccCcceeecceEEeechHHHHHHHHHHHHHHHhhc
Q 004977 320 YLAYLPLAHVLELAA-ESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKG 398 (721)
Q Consensus 320 ~l~~~pl~h~~g~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~ 398 (721)
+++.+|++|..+... ++.++..|+++++.+... ...++..++++++|++.++|++++.+........
T Consensus 217 ~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~--------~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~---- 284 (517)
T PRK08008 217 YLTVMPAFHIDCQCTAAMAAFSAGATFVLLEKYS--------ARAFWGQVCKYRATITECIPMMIRTLMVQPPSAN---- 284 (517)
T ss_pred EEEecCcHHHHHHHHHHHHHHhcCcEEEEccccC--------HHHHHHHHHHcCCcEEechHHHHHHHHhCCCccc----
Confidence 999999999876554 667788999998854321 1223334899999999999999988764211000
Q ss_pred chhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHHHHHHHhhCCccccccc
Q 004977 399 GLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMGAPIGQAYG 478 (721)
Q Consensus 399 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~~~~~~g~~l~~~YG 478 (721)
....+++.++++ .+++++....+.+.+|+++++.||
T Consensus 285 -------------------------------------------~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~YG 320 (517)
T PRK08008 285 -------------------------------------------DRQHCLREVMFY-LNLSDQEKDAFEERFGVRLLTSYG 320 (517)
T ss_pred -------------------------------------------cccccceeeEEe-cCCCHHHHHHHHHHhCCeEEeecc
Confidence 001357777665 478888888888888999999999
Q ss_pred cccccccccccCCC-CCCCCccCCCcCcceEEEEecCCCCcccCCCCCCcceEEEcc---ccccccccCCCccccccccc
Q 004977 479 LTETCAGSTFSEWD-DPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGG---FNVTAGYFNNPGKTSEVYKV 554 (721)
Q Consensus 479 ~TE~~~~~~~~~~~-~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g---~~v~~gY~~~~~~t~~~f~~ 554 (721)
+||++..++..... ....+++|.|+++++++|+| +++..+ +.|+.|||+++| ++++.|||++++.|++.|.
T Consensus 321 ~tE~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~d-~~~~~~---~~g~~Gel~v~g~~~~~~~~gy~~~~~~~~~~~~- 395 (517)
T PRK08008 321 MTETIVGIIGDRPGDKRRWPSIGRPGFCYEAEIRD-DHNRPL---PAGEIGEICIKGVPGKTIFKEYYLDPKATAKVLE- 395 (517)
T ss_pred ccccccccccCCccccccCCccccCCCCcEEEEEC-CCCCCC---CCCCcceEEEeCCCCcchhhhHhCChHHHhhccc-
Confidence 99998655544332 23347899999999999999 666654 478899999998 6899999999999999986
Q ss_pred CCCCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcccceEEEEecCCC---ceEEEEEEcCh
Q 004977 555 DERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYVDNIMIHADPFH---NYCVALVVPSH 631 (721)
Q Consensus 555 ~~~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~~a~vv~~~ 631 (721)
.+ |||+|||+|++|+||+++|+||.||+||+ +|++|+|.+||+++.+||.|.+++|+|.++. ..+.++|++++
T Consensus 396 -~~--g~~~TGDl~~~~~~g~~~~~GR~~d~i~~-~G~~i~p~~iE~~l~~~~~v~~~~v~g~~~~~~~~~~~~~v~~~~ 471 (517)
T PRK08008 396 -AD--GWLHTGDTGYVDEEGFFYFVDRRCNMIKR-GGENVSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNE 471 (517)
T ss_pred -CC--CCeeccceEEECCCCcEEEeecccceEEe-CCEEECHHHHHHHHHhCCceeeEEEEccCCCCCCceEEEEEEECC
Confidence 56 89999999999999999999999999997 5999999999999999999999999999865 35889998875
Q ss_pred HHHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCCCCCCCCccCcccccChHHHH
Q 004977 632 KALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEPWTPEAGLVTAALKIKREQLK 709 (721)
Q Consensus 632 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~~~p~~~~~t~~gKi~R~~l~ 709 (721)
+. ..+ .++|+++++ .+|++|++|..+++++++ | +|++||++|+.|+
T Consensus 472 ~~--------~~~-----------------~~~l~~~~~-~~l~~~~~P~~~~~v~~i--P----~t~~gK~~r~~l~ 517 (517)
T PRK08008 472 GE--------TLS-----------------EEEFFAFCE-QNMAKFKVPSYLEIRKDL--P----RNCSGKIIKKNLK 517 (517)
T ss_pred CC--------CCC-----------------HHHHHHHHH-hhcccccCCcEEEEeccC--C----CCCccceehhhcC
Confidence 32 000 267888888 889999999999999988 6 9999999999874
No 66
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=9.1e-66 Score=579.01 Aligned_cols=501 Identities=24% Similarity=0.344 Sum_probs=416.4
Q ss_pred CCCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEE
Q 004977 81 ASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAI 160 (721)
Q Consensus 81 ~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i 160 (721)
..++.+.|++.++.+|+++|+.+ +++ .+||+||.+++.++|+.|.+.|+++||+|++
T Consensus 4 ~~~i~~~l~~~~~~~~~~~a~~~------------~~~-----------~~Ty~~l~~~~~~~a~~L~~~gv~~g~~V~l 60 (513)
T PRK07656 4 WMTLPELLARAARRFGDKEAYVF------------GDQ-----------RLTYAELNARVRRAAAALAALGIGKGDRVAI 60 (513)
T ss_pred cccHHHHHHHHHHHCCCCeEEEe------------CCC-----------ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEE
Confidence 47899999999999999999986 343 6999999999999999999999999999999
Q ss_pred EccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccchhHHHhhhhcCCCccEEEEecCCCCCcc
Q 004977 161 LAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEKD 240 (721)
Q Consensus 161 ~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~ 240 (721)
+++|+++++++++||+++|++++|+++.++.+++.++++.++++++++++............++.++.++.........
T Consensus 61 ~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 139 (513)
T PRK07656 61 WAPNSPHWVIAALGALKAGAVVVPLNTRYTADEAAYILARGDAKALFVLGLFLGVDYSATTRLPALEHVVICETEEDDP- 139 (513)
T ss_pred ECCCChHHHHHHHHHHhcCeEEEecCcccCHHHHHHHHhhcCceEEEEchhhHHHHHHHHhccCCccEEEEEcCccccc-
Confidence 9999999999999999999999999999999999999999999999999887776666656666777776654332211
Q ss_pred CCccCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHHHHHHHhhCCCCCCCcEE
Q 004977 241 SGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNPGRSDVY 320 (721)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~d~~ 320 (721)
......+|+++...... ........++++++|+|||||||.||+|.++|+++...+......+ .+.++|++
T Consensus 140 -------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~-~~~~~~~~ 210 (513)
T PRK07656 140 -------HTEKMKTFTDFLAAGDP-AERAPEVDPDDVADILFTSGTTGRPKGAMLTHRQLLSNAADWAEYL-GLTEGDRY 210 (513)
T ss_pred -------CccccccHHHHHhcCCC-CCCcCCCCCCceEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhh-CCCCCCeE
Confidence 00123456776654322 1223445778999999999999999999999999999988888887 89999999
Q ss_pred EeccChHHHHHHHH-HHHHHHhcceEeeCccccccccchhhccCccCcceeecceEEeechHHHHHHHHHHHHHHHhhcc
Q 004977 321 LAYLPLAHVLELAA-ESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKGG 399 (721)
Q Consensus 321 l~~~pl~h~~g~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~ 399 (721)
++.+|++|.+++.. ++.++..|+++++..... +..++..++++++|++.++|+++..+.+.....
T Consensus 211 ~~~~~~~~~~~~~~~~~~~l~~G~~~~~~~~~~--------~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~------ 276 (513)
T PRK07656 211 LAANPFFHVFGYKAGVNAPLMRGATILPLPVFD--------PDEVFRLIETERITVLPGPPTMYNSLLQHPDRS------ 276 (513)
T ss_pred EEccchHHHHHHHHHHHHHHHcCceEEecCcCC--------HHHHHHHHHHhCCeEEechHHHHHHHHcCCCcC------
Confidence 99999999999876 677899999998733211 122233389999999999999999987632110
Q ss_pred hhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHHHHHHHhhCC-ccccccc
Q 004977 400 LTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMGA-PIGQAYG 478 (721)
Q Consensus 400 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~~~~~~g~-~l~~~YG 478 (721)
....+++|.+++||+++++++.+.+.+.+++ .+++.||
T Consensus 277 -----------------------------------------~~~~~~l~~v~~~g~~~~~~~~~~~~~~~~~~~~~~~YG 315 (513)
T PRK07656 277 -----------------------------------------AEDLSSLRLAVTGAASMPVALLERFESELGVDIVLTGYG 315 (513)
T ss_pred -----------------------------------------CCCccceeeEEecCCCCCHHHHHHHHHHcCCCceEeEEc
Confidence 0012589999999999999999999988898 8999999
Q ss_pred cccccccccccCCCCC-C--CCccCCCcCcceEEEEecCCCCcccCCCCCCcceEEEccccccccccCCCcccccccccC
Q 004977 479 LTETCAGSTFSEWDDP-S--VGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVD 555 (721)
Q Consensus 479 ~TE~~~~~~~~~~~~~-~--~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~ 555 (721)
+||++++++....... . .+++|+|+++++++|+| +++..+ +.|+.|||+++|+.++.||+++++.+...+.
T Consensus 316 ~tE~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~i~d-~~~~~~---~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~-- 389 (513)
T PRK07656 316 LSEASGVTTFNRLDDDRKTVAGTIGTAIAGVENKIVN-ELGEEV---PVGEVGELLVRGPNVMKGYYDDPEATAAAID-- 389 (513)
T ss_pred cccCCCceeecCccccccccCCCccccCCCcEEEEEC-CCCCCC---CCCCceEEEEEcchhhhhhcCCHHHHhhhhc--
Confidence 9999887766554322 2 57999999999999999 556554 4788999999999999999999999988874
Q ss_pred CCCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcccceEEEEecCCC---ceEEEEEEcChH
Q 004977 556 ERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYVDNIMIHADPFH---NYCVALVVPSHK 632 (721)
Q Consensus 556 ~~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~~a~vv~~~~ 632 (721)
.+ |||+|||+|+++++|.++++||.||+||+ +|++|+|.+||++|.++++|.+++|++.++. +.++++|++++.
T Consensus 390 ~~--~~~~tGDl~~~~~~g~~~~~GR~~d~i~~-~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~ 466 (513)
T PRK07656 390 AD--GWLHTGDLGRLDEEGYLYIVDRKKDMFIV-GGFNVYPAEVEEVLYEHPAVAEAAVIGVPDERLGEVGKAYVVLKPG 466 (513)
T ss_pred cC--CceeccceEEEcCCeeEEEEecccceEEe-CCEEeCHHHHHHHHHhCCCeeEEEEEecCCcccCceEEEEEEECCC
Confidence 36 89999999999999999999999999997 6999999999999999999999999998755 357888887642
Q ss_pred HHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCCCCCCCCccCcccccChHHHHH
Q 004977 633 ALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEPWTPEAGLVTAALKIKREQLKA 710 (721)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~~~p~~~~~t~~gKi~R~~l~~ 710 (721)
. +.+ .++++++++ ..|++|++|..+++++++ | +|++||++|++|++
T Consensus 467 ~--------~~~-----------------~~~l~~~~~-~~l~~~~~p~~i~~v~~i--P----~t~~gK~~r~~l~~ 512 (513)
T PRK07656 467 A--------ELT-----------------EEELIAYCR-EHLAKYKVPRSIEFLDEL--P----KNATGKVLKRALRE 512 (513)
T ss_pred C--------CCC-----------------HHHHHHHHH-hhcccccCCCEEEEecCC--C----CCCccceeHHHHhc
Confidence 1 000 256888888 899999999999999987 6 99999999999975
No 67
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=100.00 E-value=5.5e-66 Score=584.01 Aligned_cols=505 Identities=21% Similarity=0.283 Sum_probs=400.1
Q ss_pred CCCCCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCCCEE
Q 004977 79 KGASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRA 158 (721)
Q Consensus 79 ~~~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V 158 (721)
+...|+.++|.+.++++|+++|+.+.. +++ .+||+||.++++++|+.|.+.|+++||+|
T Consensus 25 ~~~~~~~~~l~~~a~~~p~~~a~~~~~----------~~~-----------~~Ty~~l~~~~~~la~~L~~~g~~~g~~V 83 (546)
T PLN02330 25 PDKLTLPDFVLQDAELYADKVAFVEAV----------TGK-----------AVTYGEVVRDTRRFAKALRSLGLRKGQVV 83 (546)
T ss_pred CCCCcHHHHHhhhhhcCCCccEEEecC----------CCC-----------cccHHHHHHHHHHHHHHHHHhCCCCCCEE
Confidence 445789999999999999999997521 233 69999999999999999999999999999
Q ss_pred EEEccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccchhHHHhhhhcCCCccEEEEecCCCCC
Q 004977 159 AILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSE 238 (721)
Q Consensus 159 ~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~ 238 (721)
+++++|+++++++++||+++|++++|+++..+.+++.+++++++++++|+++.....+.... +. ++.++....
T Consensus 84 ~i~~~~~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~-----~~-~i~~~~~~~- 156 (546)
T PLN02330 84 VVVLPNVAEYGIVALGIMAAGGVFSGANPTALESEIKKQAEAAGAKLIVTNDTNYGKVKGLG-----LP-VIVLGEEKI- 156 (546)
T ss_pred EEECCCchHHHHHHHHHHHhCcEeccCCccCCHHHHHHHHHhcCCeEEEEccchhhhHhhcC-----Cc-EEEecCCCC-
Confidence 99999999999999999999999999999999999999999999999999988776654421 12 333332110
Q ss_pred ccCCccCCCCCceEeeHHHHHhcCCCCC--CCCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHHHHHHHhhC-CCCC
Q 004977 239 KDSGVSGGISNWTVSSFSEVEKLGKRSP--VDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLI-PNPG 315 (721)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~-~~~~ 315 (721)
.....|+++........ .......++++++|+|||||||.||||+++|+++...+....... +...
T Consensus 157 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~ 225 (546)
T PLN02330 157 -----------EGAVNWKELLEAADRAGDTSDNEEILQTDLCALPFSSGTTGISKGVMLTHRNLVANLCSSLFSVGPEMI 225 (546)
T ss_pred -----------CCcccHHHHHhhccccCcccccccCCcccEEEEEeCCCCcCCCcEEEEehHHHHHHHHHHhhccCcccc
Confidence 11244666554332211 112334578999999999999999999999999987765432212 1223
Q ss_pred CCcEEEeccChHHHHHHHH-HHHHHHhcceEeeCccccccccchhhccCccCcceeecceEEeechHHHHHHHHHHHHHH
Q 004977 316 RSDVYLAYLPLAHVLELAA-ESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKV 394 (721)
Q Consensus 316 ~~d~~l~~~pl~h~~g~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~ 394 (721)
..++++..+|++|.+++.. .+.++..|+++++.+.... ..++..++++++|++.++|+++..+.+.....
T Consensus 226 ~~~~~~~~~p~~h~~g~~~~~~~~l~~g~~~~~~~~~~~--------~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~- 296 (546)
T PLN02330 226 GQVVTLGLIPFFHIYGITGICCATLRNKGKVVVMSRFEL--------RTFLNALITQEVSFAPIVPPIILNLVKNPIVE- 296 (546)
T ss_pred CceEEEEecChHHHHHHHHHHHHHhhcCCEEEEecccCH--------HHHHHHHHHcCCeeeecCCHHHHHHHhCcccc-
Confidence 4568999999999999865 5677899999888432211 12233399999999999999999886521100
Q ss_pred HhhcchhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHHHHHHHhh-CCcc
Q 004977 395 EEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICM-GAPI 473 (721)
Q Consensus 395 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~~~~~~-g~~l 473 (721)
. .. +. ..++|.+++||+++++++.+++.+.+ |+++
T Consensus 297 -~---------------------------~~----------~~------~~~l~~i~~~g~~l~~~~~~~~~~~~~~~~~ 332 (546)
T PLN02330 297 -E---------------------------FD----------LS------KLKLQAIMTAAAPLAPELLTAFEAKFPGVQV 332 (546)
T ss_pred -c---------------------------cc----------cc------hheeeeEEEcCCcCCHHHHHHHHHHcCCCeE
Confidence 0 00 00 01589999999999999999998887 8999
Q ss_pred ccccccccccccccccC-CC----CCCCCccCCCcCcceEEEEecCCCCcccCCCCCCcceEEEccccccccccCCCccc
Q 004977 474 GQAYGLTETCAGSTFSE-WD----DPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKT 548 (721)
Q Consensus 474 ~~~YG~TE~~~~~~~~~-~~----~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t 548 (721)
++.||+||++.+..... .. ....+++|+|+|+++++|+|++++..+ ++|+.|||+|+|++++.||+++++.+
T Consensus 333 ~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~v~i~d~~~~~~~---p~g~~Gel~v~g~~~~~gy~~~~~~~ 409 (546)
T PLN02330 333 QEAYGLTEHSCITLTHGDPEKGHGIAKKNSVGFILPNLEVKFIDPDTGRSL---PKNTPGELCVRSQCVMQGYYNNKEET 409 (546)
T ss_pred EecccccccccceecCCCccccccccccCccccccCCcEEEEEeCCCCccC---CCCCceEEEEecchhhhhhccCccch
Confidence 99999999976543321 11 123368999999999999996666554 48899999999999999999999999
Q ss_pred ccccccCCCCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcccceEEEEecCCC---ceEEE
Q 004977 549 SEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYVDNIMIHADPFH---NYCVA 625 (721)
Q Consensus 549 ~~~f~~~~~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~~a 625 (721)
++.+. .+ |||+|||+|++++||+++|+||.+|+||+ +|++|+|.+||++|.++|.|.+++|++.+++ ..++|
T Consensus 410 ~~~~~--~~--g~~~TGD~~~~~~dG~l~~~GR~~d~i~~-~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~a 484 (546)
T PLN02330 410 DRTID--ED--GWLHTGDIGYIDDDGDIFIVDRIKELIKY-KGFQVAPAELEAILLTHPSVEDAAVVPLPDEEAGEIPAA 484 (546)
T ss_pred hhhcc--CC--CceecccEEEEeCCCcEEEEechHHhhhc-CCEEECHHHHHHHHHhCCchheEEEEeccccccCceeEE
Confidence 98875 55 89999999999999999999999999997 5999999999999999999999999998765 45888
Q ss_pred EEEcChHHHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCCCCCCCCccCcccccCh
Q 004977 626 LVVPSHKALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEPWTPEAGLVTAALKIKR 705 (721)
Q Consensus 626 ~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~~~p~~~~~t~~gKi~R 705 (721)
+|++.++. .. ..++|+++++ .+|+.|++|+.+++++++ | +|++||++|
T Consensus 485 ~v~~~~~~----------~~---------------~~~~l~~~~~-~~l~~~~~p~~~~~v~~i--P----~t~~GK~~r 532 (546)
T PLN02330 485 CVVINPKA----------KE---------------SEEDILNFVA-ANVAHYKKVRVVQFVDSI--P----KSLSGKIMR 532 (546)
T ss_pred EEEECCCC----------CC---------------CHHHHHHHHH-HhcccccCceEEEEeccC--C----CCCCcceeH
Confidence 88876532 00 0256778887 899999999999999988 6 999999999
Q ss_pred HHHHHHHHHH
Q 004977 706 EQLKAKFKDD 715 (721)
Q Consensus 706 ~~l~~~~~~~ 715 (721)
++|++++...
T Consensus 533 ~~L~~~~~~~ 542 (546)
T PLN02330 533 RLLKEKMLSI 542 (546)
T ss_pred HHHHHHHHhh
Confidence 9999998764
No 68
>PRK08316 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.2e-65 Score=579.56 Aligned_cols=506 Identities=23% Similarity=0.312 Sum_probs=413.7
Q ss_pred CCCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEE
Q 004977 81 ASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAI 160 (721)
Q Consensus 81 ~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i 160 (721)
..|+.++|..+++++|+++|+.+ ++. .+||+||.+++.++|..|.+.|+++||+|++
T Consensus 10 ~~~l~~~l~~~a~~~~~~~a~~~------------~~~-----------~~Ty~~l~~~~~~~a~~L~~~gi~~~~~V~l 66 (523)
T PRK08316 10 RQTIGDILRRSARRYPDKTALVF------------GDR-----------SWTYAELDAAVNRVAAALLDLGLKKGDRVAA 66 (523)
T ss_pred CCCHHHHHHHHHHHCCCCeEEEE------------CCc-----------eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEE
Confidence 47899999999999999999986 333 6999999999999999999999999999999
Q ss_pred EccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccchhHHHhhhhcCCCccEEEEecCCCCCcc
Q 004977 161 LAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEKD 240 (721)
Q Consensus 161 ~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~ 240 (721)
+++|+++++++++||+++|++++|+++.++.+++.++++.++++++|++.+....+.......+. ..+........
T Consensus 67 ~~~~~~~~~~~~~a~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--- 142 (523)
T PRK08316 67 LGHNSDAYALLWLACARAGAVHVPVNFMLTGEELAYILDHSGARAFLVDPALAPTAEAALALLPV-DTLILSLVLGG--- 142 (523)
T ss_pred ECCCCHHHHHHHHHHHhcCcEEEecccccCHHHHHHHHHhCCCCEEEEccchHHHHHHHhhhcCc-cceeeeecccc---
Confidence 99999999999999999999999999999999999999999999999999887776655443331 11111111100
Q ss_pred CCccCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHHHHHHHhhCCCCCCCcEE
Q 004977 241 SGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNPGRSDVY 320 (721)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~d~~ 320 (721)
.........++++....... ........+++++|+|||||||.||+|.+||++++.........+ .+.++|++
T Consensus 143 -----~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~-~~~~~~~~ 215 (523)
T PRK08316 143 -----REAPGGWLDFADWAEAGSVA-EPDVELADDDLAQILYTSGTESLPKGAMLTHRALIAEYVSCIVAG-DMSADDIP 215 (523)
T ss_pred -----cccccchhhHHHHHhcCCCc-cCccCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHHh-CCCCCceE
Confidence 00112334555554433221 123445778999999999999999999999999999888877777 89999999
Q ss_pred EeccChHHHHHHHH-HHHHHHhcceEeeCccccccccchhhccCccCcceeecceEEeechHHHHHHHHHHHHHHHhhcc
Q 004977 321 LAYLPLAHVLELAA-ESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKGG 399 (721)
Q Consensus 321 l~~~pl~h~~g~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~ 399 (721)
++.+|++|.+++.. .+.++..|+++++.+... ...++..++++++|++.++|+++..+.+....
T Consensus 216 ~~~~p~~h~~g~~~~~~~~~~~G~~~~~~~~~~--------~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~------- 280 (523)
T PRK08316 216 LHALPLYHCAQLDVFLGPYLYVGATNVILDAPD--------PELILRTIEAERITSFFAPPTVWISLLRHPDF------- 280 (523)
T ss_pred EEccCCchhhhHHHHHHHHHhcCceEEEecCCC--------HHHHHHHHHHhCCeEEEeCHHHHHHHHcCccc-------
Confidence 99999999999865 445688999998853221 12233349999999999999999888653110
Q ss_pred hhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHHHHHHHhh-CCccccccc
Q 004977 400 LTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICM-GAPIGQAYG 478 (721)
Q Consensus 400 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~~~~~~-g~~l~~~YG 478 (721)
+....+++|.+++||++++.++.+.+++.+ ++++++.||
T Consensus 281 ----------------------------------------~~~~~~~l~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~YG 320 (523)
T PRK08316 281 ----------------------------------------DTRDLSSLRKGYYGASIMPVEVLKELRERLPGLRFYNCYG 320 (523)
T ss_pred ----------------------------------------ccCCcccceEEEEcCCcCCHHHHHHHHHHcCCCceeeeec
Confidence 011124899999999999999999998877 789999999
Q ss_pred cccccccccccCCCC--CCCCccCCCcCcceEEEEecCCCCcccCCCCCCcceEEEccccccccccCCCcccccccccCC
Q 004977 479 LTETCAGSTFSEWDD--PSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVDE 556 (721)
Q Consensus 479 ~TE~~~~~~~~~~~~--~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~~ 556 (721)
+||++.+++.....+ ...+++|+|+++++++|+| +++..+ +.|+.|||+++|++++.||+++++.+++.| .
T Consensus 321 ~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~-~~~~~~---~~g~~Gei~v~~~~~~~~y~~~~~~~~~~~---~ 393 (523)
T PRK08316 321 QTEIAPLATVLGPEEHLRRPGSAGRPVLNVETRVVD-DDGNDV---APGEVGEIVHRSPQLMLGYWDDPEKTAEAF---R 393 (523)
T ss_pred ccccCccccccCccccccccCCcccCCCCcEEEEEc-CCCCCC---CCCCcceEEEECCchhhhhcCCHHHHHHHh---h
Confidence 999988776544322 3357999999999999999 556554 478999999999999999999999999988 6
Q ss_pred CCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcccceEEEEecCCCc---eEEEEEEcChHH
Q 004977 557 RGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYVDNIMIHADPFHN---YCVALVVPSHKA 633 (721)
Q Consensus 557 ~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~~---~~~a~vv~~~~~ 633 (721)
+ |||+|||+|++++||.++++||.||+||+ +|++|+|.+||+.|.++++|.+++|++.+++. .++++++++++.
T Consensus 394 ~--~~~~TGDl~~~~~~g~l~i~gR~~~~i~~-~G~~i~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~ 470 (523)
T PRK08316 394 G--GWFHSGDLGVMDEEGYITVVDRKKDMIKT-GGENVASREVEEALYTHPAVAEVAVIGLPDPKWIEAVTAVVVPKAGA 470 (523)
T ss_pred C--CCeeccceEEEcCCceEEEecccccEEEe-CCeEECHHHHHHHHHhCCChheEeEecccCcccCCeEEEEEEECCCC
Confidence 6 89999999999999999999999999997 69999999999999999999999999987664 588888876532
Q ss_pred HHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCCCCCCCCccCcccccChHHHHHHHH
Q 004977 634 LEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEPWTPEAGLVTAALKIKREQLKAKFK 713 (721)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~~~p~~~~~t~~gKi~R~~l~~~~~ 713 (721)
+. ..+++.++++ .+|+.|++|..+++++++ | +|++||++|++|+++|+
T Consensus 471 ----------~~---------------~~~~l~~~~~-~~l~~~~~p~~i~~v~~~--p----~t~~gKi~r~~l~~~~~ 518 (523)
T PRK08316 471 ----------TV---------------TEDELIAHCR-ARLAGFKVPKRVIFVDEL--P----RNPSGKILKRELRERYA 518 (523)
T ss_pred ----------CC---------------CHHHHHHHHH-HhcccCCCCcEEEEecCC--C----CCCccceeHHHHHHHHH
Confidence 00 0256777777 789999999999999887 6 99999999999999999
Q ss_pred HHHH
Q 004977 714 DDLQ 717 (721)
Q Consensus 714 ~~i~ 717 (721)
+.++
T Consensus 519 ~~~~ 522 (523)
T PRK08316 519 GAFT 522 (523)
T ss_pred hhcc
Confidence 8775
No 69
>PRK08315 AMP-binding domain protein; Validated
Probab=100.00 E-value=1.5e-65 Score=583.10 Aligned_cols=506 Identities=24% Similarity=0.350 Sum_probs=409.5
Q ss_pred CCCCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEE
Q 004977 80 GASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAA 159 (721)
Q Consensus 80 ~~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~ 159 (721)
...|+.++|.+.++++|+++|+++. ++. +.+||+||.++++++|+.|.+.|+++||+|+
T Consensus 14 ~~~~l~~~l~~~~~~~~~~~ai~~~-----------~~~----------~~~Ty~~l~~~~~~~a~~L~~~gi~~g~~V~ 72 (559)
T PRK08315 14 LEQTIGQLLDRTAARYPDREALVYR-----------DQG----------LRWTYREFNEEVDALAKGLLALGIEKGDRVG 72 (559)
T ss_pred hhccHHHHHHHHHHHCCCCeEEEEc-----------CCC----------eEEcHHHHHHHHHHHHHHHHHcCCCCCCEEE
Confidence 3468999999999999999999864 222 3699999999999999999999999999999
Q ss_pred EEccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccch-----hHHHhhhhc------------
Q 004977 160 ILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQL-----KKLSAVSSS------------ 222 (721)
Q Consensus 160 i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~-----~~~~~~~~~------------ 222 (721)
++++|++++++++|||+++|++++|+++.++.+++..+++.++++++|+++... ..+......
T Consensus 73 i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (559)
T PRK08315 73 IWAPNVPEWVLTQFATAKIGAILVTINPAYRLSELEYALNQSGCKALIAADGFKDSDYVAMLYELAPELATCEPGQLQSA 152 (559)
T ss_pred EECCCChHHHHHHHHHHHhCeEEEecCccCCHHHHHHHHHhcCCCEEEEeccccccchHHHHHHhhhhhhcccccccccc
Confidence 999999999999999999999999999999999999999999999999987542 112222111
Q ss_pred -CCCccEEEEecCCCCCccCCccCCCCCceEeeHHHHHhcCCCCC-----CCCCCCCCCCeEEEEeccCCCCCcchheec
Q 004977 223 -LKTIKNVIYFENDGSEKDSGVSGGISNWTVSSFSEVEKLGKRSP-----VDPSLPSQNGVAVIMYTSGSTGLPKGVMIT 296 (721)
Q Consensus 223 -~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~d~a~i~~TSGTTG~PKgV~~s 296 (721)
.+..+.++.++... ......++++........ .......++++++++|||||||.||+|.+|
T Consensus 153 ~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s 220 (559)
T PRK08315 153 RLPELRRVIFLGDEK------------HPGMLNFDELLALGRAVDDAELAARQATLDPDDPINIQYTSGTTGFPKGATLT 220 (559)
T ss_pred cCCCceeEEeecccC------------CcccccHHHHHhhccccccccccchhccCCCCCcEEEEEcCCCCCCcceEEee
Confidence 13344555443321 112345555544321111 111234578899999999999999999999
Q ss_pred cHHHHHHHHHHHhhCCCCCCCcEEEeccChHHHHHHHH-HHHHHHhcceEee----CccccccccchhhccCccCcceee
Q 004977 297 HGNIVATAAAIKTLIPNPGRSDVYLAYLPLAHVLELAA-ESIMLCAGCAIGY----GSTLTMTDTSSKIKKGTKGDVSVL 371 (721)
Q Consensus 297 h~~l~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~-~~~~l~~G~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~ 371 (721)
|+++...+......+ ++.++|+++..+|++|.+++.. ++.++..|+++++ .++..+.+. ++++
T Consensus 221 ~~~l~~~~~~~~~~~-~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~-----------l~~~ 288 (559)
T PRK08315 221 HRNILNNGYFIGEAM-KLTEEDRLCIPVPLYHCFGMVLGNLACVTHGATMVYPGEGFDPLATLAA-----------VEEE 288 (559)
T ss_pred HHHHHHHHHHHHHhc-CCCCCceEEEecCcHHHHHHHHHHHHHHhccceEEEecCCCCHHHHHHH-----------HHHc
Confidence 999999988888877 8999999999999999999865 6778999999985 233333333 9999
Q ss_pred cceEEeechHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEE
Q 004977 372 KPTLMAAVPAIFDRVREGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMI 451 (721)
Q Consensus 372 ~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~ 451 (721)
++|++.++|+++..+...... +....+++|.++
T Consensus 289 ~~t~~~~~P~~~~~~~~~~~~-----------------------------------------------~~~~~~~lr~~~ 321 (559)
T PRK08315 289 RCTALYGVPTMFIAELDHPDF-----------------------------------------------ARFDLSSLRTGI 321 (559)
T ss_pred CCeEEecchHHHHHHHhCccc-----------------------------------------------CCCCchhhheeE
Confidence 999999999999877642110 001124899999
Q ss_pred ecCCCCCHHHHHHHHHhhCC-ccccccccccccccccccCCCC---CCCCccCCCcCcceEEEEecCCCCcccCCCCCCc
Q 004977 452 CGGAPLSADSQRFINICMGA-PIGQAYGLTETCAGSTFSEWDD---PSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPR 527 (721)
Q Consensus 452 ~gG~~l~~~~~~~~~~~~g~-~l~~~YG~TE~~~~~~~~~~~~---~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~ 527 (721)
+||+++++++.+.+.+.++. ++++.||+||++.+++...... .+..++|+|+|+++++|+|++++..+ +.|+.
T Consensus 322 ~~G~~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~d~~~~~~~---~~g~~ 398 (559)
T PRK08315 322 MAGSPCPIEVMKRVIDKMHMSEVTIAYGMTETSPVSTQTRTDDPLEKRVTTVGRALPHLEVKIVDPETGETV---PRGEQ 398 (559)
T ss_pred ecCCCCCHHHHHHHHHHcCCcceeEEEcccccccceeecCcccchhhccCCCCccCCCcEEEEEcCccCCcC---CCCCc
Confidence 99999999999988888865 4999999999987766543322 24579999999999999996556554 48899
Q ss_pred ceEEEccccccccccCCCcccccccccCCCCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCc
Q 004977 528 GEIVVGGFNVTAGYFNNPGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSD 607 (721)
Q Consensus 528 GEl~v~g~~v~~gY~~~~~~t~~~f~~~~~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p 607 (721)
|||+|+|++++.||+++|+.+++.|. .+ +||+|||+|++|+||.++|+||.||+||+ +|++|+|.|||++|.++|
T Consensus 399 GEl~v~g~~~~~gy~~~~~~~~~~~~--~~--~~~~TGD~~~~~~dg~~~~~GR~d~~i~~-~G~~v~~~eIE~~l~~~~ 473 (559)
T PRK08315 399 GELCTRGYSVMKGYWNDPEKTAEAID--AD--GWMHTGDLAVMDEEGYVNIVGRIKDMIIR-GGENIYPREIEEFLYTHP 473 (559)
T ss_pred eEEEEECchhhhhhcCChhHHhhcCC--CC--CCEEccceEEEcCCceEEEEeeccceEEE-CCEEEcHHHHHHHHHhCC
Confidence 99999999999999999999988875 45 89999999999999999999999999997 699999999999999999
Q ss_pred ccceEEEEecCCC---ceEEEEEEcChHHHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEE
Q 004977 608 YVDNIMIHADPFH---NYCVALVVPSHKALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIK 684 (721)
Q Consensus 608 ~V~~~~V~g~~~~---~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~ 684 (721)
+|.+++|++.+++ ..++++|++.++. ..+ .++++++++ ++|+.|++|..++
T Consensus 474 ~v~~~~v~~~~~~~~~~~~~~~v~~~~~~--------~~~-----------------~~~l~~~l~-~~l~~~~~P~~i~ 527 (559)
T PRK08315 474 KIQDVQVVGVPDEKYGEEVCAWIILRPGA--------TLT-----------------EEDVRDFCR-GKIAHYKIPRYIR 527 (559)
T ss_pred CceEEEEEecCCCCCCeEEEEEEEeCCCC--------CCC-----------------HHHHHHHHH-hhcccccCCcEEE
Confidence 9999999998765 3588888876431 000 257788887 8999999999999
Q ss_pred eeCCCCCCCCCccCcccccChHHHHHHHHHHHH
Q 004977 685 LMPEPWTPEAGLVTAALKIKREQLKAKFKDDLQ 717 (721)
Q Consensus 685 ~~~~~~~p~~~~~t~~gKi~R~~l~~~~~~~i~ 717 (721)
+++++ | +|++||++|.+|++++.+...
T Consensus 528 ~v~~l--P----~t~~GK~~r~~L~~~~~~~~~ 554 (559)
T PRK08315 528 FVDEF--P----MTVTGKIQKFKMREMMIEELG 554 (559)
T ss_pred EcccC--C----CCCCCceeHHHHHHHHHhhhc
Confidence 99987 6 999999999999999877654
No 70
>PRK07514 malonyl-CoA synthase; Validated
Probab=100.00 E-value=3.7e-65 Score=572.61 Aligned_cols=496 Identities=24% Similarity=0.374 Sum_probs=403.5
Q ss_pred CCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEE
Q 004977 82 STMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAIL 161 (721)
Q Consensus 82 ~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~ 161 (721)
.++.+++.+++ .+|+++|+... +++ .+||+||.++++++|++|.+.|+++||+|+++
T Consensus 3 ~~l~~~~~~~~-~~~~~~a~~~~-----------~~~-----------~~Ty~eL~~~~~~la~~L~~~g~~~gd~v~i~ 59 (504)
T PRK07514 3 NNLFDALRAAF-ADRDAPFIETP-----------DGL-----------RYTYGDLDAASARLANLLVALGVKPGDRVAVQ 59 (504)
T ss_pred ccHHHHHHHHh-hCCCCeEEEeC-----------CCC-----------EEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEE
Confidence 68999999999 99999999752 343 79999999999999999999999999999999
Q ss_pred ccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccchhHHHhhhhcCCCccEEEEecCCCCCccC
Q 004977 162 AETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEKDS 241 (721)
Q Consensus 162 ~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~ 241 (721)
++|+++++++++||+++|++++|+++.++.+++.++++.++++++++++.....+....... ....++.++....
T Consensus 60 ~~~~~e~~v~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~---- 134 (504)
T PRK07514 60 VEKSPEALALYLATLRAGAVFLPLNTAYTLAELDYFIGDAEPALVVCDPANFAWLSKIAAAA-GAPHVETLDADGT---- 134 (504)
T ss_pred CCCCHHHHHHHHHHHHcCcEEEECCCCCCHHHHHHHHHhCCCcEEEEccchhHHHHHhhhcc-CCceEEEecCCCc----
Confidence 99999999999999999999999999999999999999999999999988776665544332 2232443332211
Q ss_pred CccCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHHHHHHHhhCCCCCCCcEEE
Q 004977 242 GVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNPGRSDVYL 321 (721)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~d~~l 321 (721)
..+.+..... ..........++++++|+|||||||.||+|++||+++...+......+ .+.++|+++
T Consensus 135 -----------~~~~~~~~~~-~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~-~~~~~d~~l 201 (504)
T PRK07514 135 -----------GSLLEAAAAA-PDDFETVPRGADDLAAILYTSGTTGRSKGAMLSHGNLLSNALTLVDYW-RFTPDDVLI 201 (504)
T ss_pred -----------ccHHHhhhhc-CcccCcccCCCCCeEEEEECCCCCCCCcEEEEecHHHHHHHHHHHHHh-CCCCccEEE
Confidence 1111211111 111122345678999999999999999999999999999988877777 888999999
Q ss_pred eccChHHHHHHHH-HHHHHHhcceEeeCccccccccchhhccCccCcceeecceEEeechHHHHHHHHHHHHHHHhhcch
Q 004977 322 AYLPLAHVLELAA-ESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKGGL 400 (721)
Q Consensus 322 ~~~pl~h~~g~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~ 400 (721)
+.+|++|..++.. .+.++..|+++++.+..... .++..+ .++|++.++|+++..++.....
T Consensus 202 ~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~--------~~~~~i--~~~t~~~~~P~~~~~l~~~~~~-------- 263 (504)
T PRK07514 202 HALPIFHTHGLFVATNVALLAGASMIFLPKFDPD--------AVLALM--PRATVMMGVPTFYTRLLQEPRL-------- 263 (504)
T ss_pred EecchHHHHHHHHHHHHHHhcCcEEEECCCCCHH--------HHHHHH--HhheeeecHHHHHHHHHcCCCC--------
Confidence 9999999999865 66789999999885432211 111124 4799999999999888652100
Q ss_pred hhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHHHHHHHhhCCccccccccc
Q 004977 401 TKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMGAPIGQAYGLT 480 (721)
Q Consensus 401 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~~~~~~g~~l~~~YG~T 480 (721)
.....+++|.+++||+++++++.+.+...++.++++.||+|
T Consensus 264 ---------------------------------------~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~~~~~~~~YG~t 304 (504)
T PRK07514 264 ---------------------------------------TREAAAHMRLFISGSAPLLAETHREFQERTGHAILERYGMT 304 (504)
T ss_pred ---------------------------------------CcccccceeeEEecCCCCCHHHHHHHHHHhCCcceeecccc
Confidence 00112589999999999999999999998999999999999
Q ss_pred cccccccccCCCCCCCCccCCCcCcceEEEEecCCCCcccCCCCCCcceEEEccccccccccCCCcccccccccCCCCcc
Q 004977 481 ETCAGSTFSEWDDPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVDERGMC 560 (721)
Q Consensus 481 E~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~~~g~g 560 (721)
|++...+.........+++|.|+++++++|+|++++..+ +.|+.|||+|+|++++.||+++++.+++.|. .+ +
T Consensus 305 E~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~---~~g~~Gel~i~~~~~~~gy~~~~~~~~~~~~--~~--~ 377 (504)
T PRK07514 305 ETNMNTSNPYDGERRAGTVGFPLPGVSLRVTDPETGAEL---PPGEIGMIEVKGPNVFKGYWRMPEKTAEEFR--AD--G 377 (504)
T ss_pred cccccccCCccccccCcccccCCCCcEEEEEECCCCCCC---CCCCceEEEEecCCccccccCCchhhhhhcc--cC--C
Confidence 998665543333334578999999999999997666654 4788999999999999999999999999985 46 8
Q ss_pred eEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcccceEEEEecCCC---ceEEEEEEcChHHHHHH
Q 004977 561 WFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYVDNIMIHADPFH---NYCVALVVPSHKALEKW 637 (721)
Q Consensus 561 w~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~~a~vv~~~~~~~~~ 637 (721)
||+|||+|+++++|+++++||+||+||+ +|++|+|.+||+++.++++|.+++|++.+++ ..+++++++.++..
T Consensus 378 ~~~TGDl~~~~~~g~~~~~GR~~~~i~~-~G~~i~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~~~~~~~~~--- 453 (504)
T PRK07514 378 FFITGDLGKIDERGYVHIVGRGKDLIIS-GGYNVYPKEVEGEIDELPGVVESAVIGVPHPDFGEGVTAVVVPKPGAA--- 453 (504)
T ss_pred CeeecceEEEcCCccEEEeccccceEEe-CCeEECHHHHHHHHHhCCCeeEEEEEeCCCCCcCceEEEEEEECCCCC---
Confidence 9999999999999999999999999997 6999999999999999999999999998764 35888888764320
Q ss_pred HHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCCCCCCCCccCcccccChHHHHHHHHHH
Q 004977 638 AHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEPWTPEAGLVTAALKIKREQLKAKFKDD 715 (721)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~~~p~~~~~t~~gKi~R~~l~~~~~~~ 715 (721)
.+ .+++++.++ .+|++|++|+.+++++++ | +|++||++|++|+++|++.
T Consensus 454 -----~~-----------------~~~l~~~~~-~~l~~~~~p~~i~~v~~~--p----~t~~gK~~r~~l~~~~~~~ 502 (504)
T PRK07514 454 -----LD-----------------EAAILAALK-GRLARFKQPKRVFFVDEL--P----RNTMGKVQKNLLREQYADL 502 (504)
T ss_pred -----CC-----------------HHHHHHHHH-hhcccCCCCcEEEEeccC--C----CCCCcceeHHHHHHHHHhh
Confidence 00 256777887 789999999999999987 6 9999999999999887764
No 71
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=100.00 E-value=4.2e-65 Score=577.44 Aligned_cols=507 Identities=22% Similarity=0.305 Sum_probs=408.7
Q ss_pred CCCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEE
Q 004977 81 ASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAI 160 (721)
Q Consensus 81 ~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i 160 (721)
..|+.++|++.++++||++|+++. +|+ .+||+||.++++++|++|++.|+++||+|++
T Consensus 22 ~~~l~~~~~~~~~~~pd~~a~~~~-----------~~~-----------~~Ty~~l~~~v~~la~~l~~~G~~~gd~V~i 79 (547)
T PRK06087 22 DASLADYWQQTARAMPDKIAVVDN-----------HGA-----------SYTYSALDHAASRLANWLLAKGIEPGDRVAF 79 (547)
T ss_pred CCCHHHHHHHHHHHCCCceEEEcC-----------CCC-----------EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEE
Confidence 468999999999999999999752 333 6999999999999999999999999999999
Q ss_pred EccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccc-----hhHHHhhhhcCCCccEEEEecCC
Q 004977 161 LAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQ-----LKKLSAVSSSLKTIKNVIYFEND 235 (721)
Q Consensus 161 ~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~-----~~~~~~~~~~~~~~~~ii~~~~~ 235 (721)
+++|+++|+++++||+++|++++|+++.++.+++.++++.++++++++++.. .+.+......++.++.++.++..
T Consensus 80 ~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (547)
T PRK06087 80 QLPGWCEFTIIYLACLKVGAVSVPLLPSWREAELVWVLNKCQAKMFFAPTLFKQTRPVDLILPLQNQLPQLQQIVGVDKL 159 (547)
T ss_pred ECCCCHHHHHHHHHHHHcCcEEeccchhcCHHHHHHHHHhcCCeEEEEecccccccHHHHHHHHHhhCCCCcEEEEeCCc
Confidence 9999999999999999999999999999999999999999999999997632 34444555566666677766543
Q ss_pred CCCccCCccCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHHHHHHHhhCCCCC
Q 004977 236 GSEKDSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNPG 315 (721)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~ 315 (721)
... ....++.++........ ......++++++|+|||||||.||+|++||++++.........+ ++.
T Consensus 160 ~~~-----------~~~~~~~~~~~~~~~~~-~~~~~~~~d~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~-~~~ 226 (547)
T PRK06087 160 APA-----------TSSLSLSQIIADYEPLT-TAITTHGDELAAVLFTSGTEGLPKGVMLTHNNILASERAYCARL-NLT 226 (547)
T ss_pred CCC-----------cCccCHHHHhccCCccc-CCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhc-CCC
Confidence 211 11124455443222111 12345678999999999999999999999999998888877777 889
Q ss_pred CCcEEEeccChHHHHHHHH-HHHHHHhcceEeeCccccccccchhhccCccCcceeecceEEeechHHHHHHHHHHHHHH
Q 004977 316 RSDVYLAYLPLAHVLELAA-ESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKV 394 (721)
Q Consensus 316 ~~d~~l~~~pl~h~~g~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~ 394 (721)
++|++++.+|++|.+++.. .+.++..|+++++.+.... ..++..+.++++|+++++|+.+..+++....
T Consensus 227 ~~d~~l~~~pl~h~~g~~~~~~~~l~~g~~~~~~~~~~~--------~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~-- 296 (547)
T PRK06087 227 WQDVFMMPAPLGHATGFLHGVTAPFLIGARSVLLDIFTP--------DACLALLEQQRCTCMLGATPFIYDLLNLLEK-- 296 (547)
T ss_pred CCCeEEEecchHHHHHHHHHHHHHHhcCCEEEecCCCCH--------HHHHHHHHHcCCCEEeccHHHHHHHHhcccc--
Confidence 9999999999999999765 6677889999988443211 1122338999999999887776666542110
Q ss_pred HhhcchhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHHHHHHHhhCCccc
Q 004977 395 EEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMGAPIG 474 (721)
Q Consensus 395 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~~~~~~g~~l~ 474 (721)
.....+++|.+++||+++++++.+.+... |++++
T Consensus 297 ---------------------------------------------~~~~~~~lr~i~~gG~~~~~~~~~~~~~~-~~~l~ 330 (547)
T PRK06087 297 ---------------------------------------------QPADLSALRFFLCGGTTIPKKVARECQQR-GIKLL 330 (547)
T ss_pred ---------------------------------------------CCCCCCCeEEEEEcCCCCCHHHHHHHHHc-CCcEE
Confidence 00112589999999999999998887764 99999
Q ss_pred cccccccccccccccCCCC--CCCCccCCCcCcceEEEEecCCCCcccCCCCCCcceEEEccccccccccCCCccccccc
Q 004977 475 QAYGLTETCAGSTFSEWDD--PSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVY 552 (721)
Q Consensus 475 ~~YG~TE~~~~~~~~~~~~--~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f 552 (721)
+.||+||++..+....... ...+++|+|+++++++|+| +++..+ ++|+.|||+++|++++.||+++++.+...|
T Consensus 331 ~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d-~~~~~~---~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~ 406 (547)
T PRK06087 331 SVYGSTESSPHAVVNLDDPLSRFMHTDGYAAAGVEIKVVD-EARKTL---PPGCEGEEASRGPNVFMGYLDEPELTARAL 406 (547)
T ss_pred EEecccccCCccccCCCcchhhcCCcCCccCCCceEEEEc-CCCCCC---cCCCcceEEEecccccccccCCHHHHHHHh
Confidence 9999999987765443221 2346789999999999999 566544 588999999999999999999999998888
Q ss_pred ccCCCCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcccceEEEEecCCCc---eEEEEEEc
Q 004977 553 KVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYVDNIMIHADPFHN---YCVALVVP 629 (721)
Q Consensus 553 ~~~~~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~~---~~~a~vv~ 629 (721)
. .+ |||+|||+|++|++|+++++||.||+||. +|++|+|.+||++|.++|+|.+++|++.+++. .++++|++
T Consensus 407 ~--~~--g~~~TGDl~~~~~~g~l~i~GR~~d~i~~-~G~~v~p~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~ 481 (547)
T PRK06087 407 D--EE--GWYYSGDLCRMDEAGYIKITGRKKDIIVR-GGENISSREVEDILLQHPKIHDACVVAMPDERLGERSCAYVVL 481 (547)
T ss_pred C--CC--CCcCcCceEEECCCCCEEEEecchhhhhc-CCEEECHHHHHHHHHhCCCeeEEEEEecCCCCcCceEEEEEEE
Confidence 5 45 89999999999999999999999999996 69999999999999999999999999987653 58888887
Q ss_pred ChHHHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCCCCCCCCccCcccccChHHHH
Q 004977 630 SHKALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEPWTPEAGLVTAALKIKREQLK 709 (721)
Q Consensus 630 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~~~p~~~~~t~~gKi~R~~l~ 709 (721)
.+.. ...+ .+++.+++.+.+|++|++|..|.+++++ | +|++||++|++|+
T Consensus 482 ~~~~---------~~~~---------------~~~~~~~~~~~~l~~~~~P~~i~~v~~i--P----~t~sGK~~r~~l~ 531 (547)
T PRK06087 482 KAPH---------HSLT---------------LEEVVAFFSRKRVAKYKYPEHIVVIDKL--P----RTASGKIQKFLLR 531 (547)
T ss_pred CCCC---------CCCC---------------HHHHHHHHHhccccccCCCeEEEEeccC--C----CCCCCcCcHHHHH
Confidence 6421 0000 2456666544789999999999999988 6 9999999999999
Q ss_pred HHHHHHHH
Q 004977 710 AKFKDDLQ 717 (721)
Q Consensus 710 ~~~~~~i~ 717 (721)
+++.+.+.
T Consensus 532 ~~~~~~~~ 539 (547)
T PRK06087 532 KDIMRRLT 539 (547)
T ss_pred HHHHHHhh
Confidence 99988765
No 72
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=4.5e-65 Score=578.34 Aligned_cols=512 Identities=24% Similarity=0.356 Sum_probs=396.4
Q ss_pred CCCCCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhC-CCCCCCE
Q 004977 79 KGASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNF-GHNVDTR 157 (721)
Q Consensus 79 ~~~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~-Gv~~gd~ 157 (721)
....++.++|.++++++|+++|++. +++ .+||+||.++++++|+.|.+. |+++||+
T Consensus 21 ~~~~~~~~~l~~~~~~~p~~~a~~~------------~~~-----------~~Ty~~l~~~~~~~a~~L~~~~gi~~gd~ 77 (562)
T PRK12492 21 AAYKSVVEVFERSCKKFADRPAFSN------------LGV-----------TLSYAELERHSAAFAAYLQQHTDLVPGDR 77 (562)
T ss_pred cccCcHHHHHHHHHHhCCCCeeEec------------CCc-----------eeeHHHHHHHHHHHHHHHHHhcCCCCCCE
Confidence 3446899999999999999999974 333 699999999999999999985 9999999
Q ss_pred EEEEccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccchhHHHhhhhcCCCccEEEEecCCC-
Q 004977 158 AAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDG- 236 (721)
Q Consensus 158 V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~ii~~~~~~- 236 (721)
|+++++|+++|+++++||+++|++++|+++.++.+++.+++++++++++++++...+.+..+.... .+..++......
T Consensus 78 V~i~~~n~~e~~~~~la~~~~G~v~v~~~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 156 (562)
T PRK12492 78 IAVQMPNVLQYPIAVFGALRAGLIVVNTNPLYTAREMRHQFKDSGARALVYLNMFGKLVQEVLPDT-GIEYLIEAKMGDL 156 (562)
T ss_pred EEEECCCCHHHHHHHHHHHHcCeEEeccCccCCHHHHHHHHhccCceEEEeccccchHHHHhhhcc-CceEEEeechhhc
Confidence 999999999999999999999999999999999999999999999999999876655444432221 111111111000
Q ss_pred CCc---------cCCccCC-C--CCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHHH
Q 004977 237 SEK---------DSGVSGG-I--SNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATA 304 (721)
Q Consensus 237 ~~~---------~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~ 304 (721)
... ....... + ......+|+++..........+.....+++++|+|||||||.||||+++|+|+...+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~ 236 (562)
T PRK12492 157 LPAAKGWLVNTVVDKVKKMVPAYHLPQAVPFKQALRQGRGLSLKPVPVGLDDIAVLQYTGGTTGLAKGAMLTHGNLVANM 236 (562)
T ss_pred cccccchhcccccccccccccccCCcccccHHHHHhccCCCCCCCCCCCcCCeEEEEeCCCCCCCCceEEEechhHHHHH
Confidence 000 0000000 0 001224566665443322222344567899999999999999999999999998877
Q ss_pred HHHHhhCCC--------CCC-CcEEEeccChHHHHHHHH-HHHHHHhcceEeeC-ccccccccchhhccCccCcceeecc
Q 004977 305 AAIKTLIPN--------PGR-SDVYLAYLPLAHVLELAA-ESIMLCAGCAIGYG-STLTMTDTSSKIKKGTKGDVSVLKP 373 (721)
Q Consensus 305 ~~~~~~~~~--------~~~-~d~~l~~~pl~h~~g~~~-~~~~l~~G~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~ 373 (721)
......+.. +.. ++++++.+|++|.+++.. .+..+..|++.++. ++... ..++..++++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~~~~~g~~~~~~~~~~~~--------~~~~~~i~~~~~ 308 (562)
T PRK12492 237 LQVRACLSQLGPDGQPLMKEGQEVMIAPLPLYHIYAFTANCMCMMVSGNHNVLITNPRDI--------PGFIKELGKWRF 308 (562)
T ss_pred HHHHHHHhcccccccccccCCCeEEEEecchHHHHHHHHHHHHHhhcCceEEEecCCcCH--------HHHHHHHHHhCC
Confidence 665544311 222 357899999999999865 45557788876653 22211 112233899999
Q ss_pred eEEeechHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEec
Q 004977 374 TLMAAVPAIFDRVREGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICG 453 (721)
Q Consensus 374 t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~g 453 (721)
|++.++|+++..+.+... ......+++|.+++|
T Consensus 309 t~~~~~p~~~~~l~~~~~-----------------------------------------------~~~~~~~~lr~~~~g 341 (562)
T PRK12492 309 SALLGLNTLFVALMDHPG-----------------------------------------------FKDLDFSALKLTNSG 341 (562)
T ss_pred ceeeCcHHHHHHHHhCcC-----------------------------------------------cccccccceeEEEec
Confidence 999999999998765210 001112589999999
Q ss_pred CCCCCHHHHHHHHHhhCCccccccccccccccccccCCCC-CCCCccCCCcCcceEEEEecCCCCcccCCCCCCcceEEE
Q 004977 454 GAPLSADSQRFINICMGAPIGQAYGLTETCAGSTFSEWDD-PSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVV 532 (721)
Q Consensus 454 G~~l~~~~~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~~-~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v 532 (721)
|+++++++.+.+.+.+|++++++||+||++.+++...... ...+++|+|+++++++|+| +++..+ ++|+.|||+|
T Consensus 342 G~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~p~~~~~v~ivd-~~~~~~---~~g~~Gel~v 417 (562)
T PRK12492 342 GTALVKATAERWEQLTGCTIVEGYGLTETSPVASTNPYGELARLGTVGIPVPGTALKVID-DDGNEL---PLGERGELCI 417 (562)
T ss_pred cccCCHHHHHHHHHHhCCceeeccCccccCceeeecCCcccccCCccceecCCCEEEEEC-CCCCCC---CCCCceEEEE
Confidence 9999999999998888999999999999987766544322 2447899999999999999 566554 4789999999
Q ss_pred ccccccccccCCCcccccccccCCCCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcccceE
Q 004977 533 GGFNVTAGYFNNPGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYVDNI 612 (721)
Q Consensus 533 ~g~~v~~gY~~~~~~t~~~f~~~~~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~~~ 612 (721)
+|+.++.|||++|+.|.+.|. .+ |||+|||+|++|++|+++|+||.||+||+ +|++|+|.+||++|.+||.|.++
T Consensus 418 ~g~~~~~gY~~~~~~t~~~~~--~~--g~~~TGD~g~~~~~G~l~i~GR~~~~i~~-~G~~i~~~eIE~~l~~~~~v~~~ 492 (562)
T PRK12492 418 KGPQVMKGYWQQPEATAEALD--AE--GWFKTGDIAVIDPDGFVRIVDRKKDLIIV-SGFNVYPNEIEDVVMAHPKVANC 492 (562)
T ss_pred eCCccccccccCchhhhhccc--CC--CceecCcEEEECCCCeEEEecccCCeEEE-CCEEECHHHHHHHHHhCCCeeEE
Confidence 999999999999999999885 45 89999999999999999999999999997 59999999999999999999999
Q ss_pred EEEecCCC---ceEEEEEEcChHHHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCC
Q 004977 613 MIHADPFH---NYCVALVVPSHKALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEP 689 (721)
Q Consensus 613 ~V~g~~~~---~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~ 689 (721)
+|++.++. ..+++++++.+... + .++++++++ ++|+.|++|..+++++++
T Consensus 493 ~v~~~~~~~~~~~~~~~v~~~~~~~---------~-----------------~~~i~~~~~-~~l~~~~~P~~i~~~~~~ 545 (562)
T PRK12492 493 AAIGVPDERSGEAVKLFVVARDPGL---------S-----------------VEELKAYCK-ENFTGYKVPKHIVLRDSL 545 (562)
T ss_pred EEEeccCCCCCceEEEEEEeCCCCC---------C-----------------HHHHHHHHH-HhcccccCCcEEEEeccC
Confidence 99998765 35788887653210 0 257888888 889999999999999988
Q ss_pred CCCCCCccCcccccChHHHHHH
Q 004977 690 WTPEAGLVTAALKIKREQLKAK 711 (721)
Q Consensus 690 ~~p~~~~~t~~gKi~R~~l~~~ 711 (721)
| +|++||++|++|++.
T Consensus 546 --P----~t~~GK~~r~~L~~~ 561 (562)
T PRK12492 546 --P----MTPVGKILRRELRDI 561 (562)
T ss_pred --C----CCCCCceeHHHHHhh
Confidence 6 999999999999864
No 73
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=100.00 E-value=2.5e-65 Score=629.10 Aligned_cols=510 Identities=24% Similarity=0.312 Sum_probs=404.8
Q ss_pred CCCCCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCCCEE
Q 004977 79 KGASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRA 158 (721)
Q Consensus 79 ~~~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V 158 (721)
+...|+.+.|+++++++|+++|++.. +++ .+||+||.++++++|+.|.+ ++++||+|
T Consensus 612 ~~~~~l~~~~~~~a~~~p~~~a~~~~-----------~~~-----------~~Ty~el~~~~~~~a~~L~~-~~~~g~~V 668 (1146)
T PRK08633 612 EALPPLAEAWIDTAKRNWSRLAVADS-----------TGG-----------ELSYGKALTGALALARLLKR-ELKDEENV 668 (1146)
T ss_pred CCCCCHHHHHHHHHHhcCCCcEEEcC-----------CCC-----------cCcHHHHHHHHHHHHHHHHH-hCCCCCeE
Confidence 44689999999999999999999742 222 69999999999999999987 48999999
Q ss_pred EEEccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccchhHHHhhh--hcCCCccEEEEecCCC
Q 004977 159 AILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVS--SSLKTIKNVIYFENDG 236 (721)
Q Consensus 159 ~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~--~~~~~~~~ii~~~~~~ 236 (721)
+++++|+++++++++||+++|++++|+++..+.+++.++++++++++++++++..+.+.... ...+....++..++..
T Consensus 669 ~i~~~n~~~~~~~~la~~~~G~v~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 748 (1146)
T PRK08633 669 GILLPPSVAGALANLALLLAGKVPVNLNYTASEAALKSAIEQAQIKTVITSRKFLEKLKNKGFDLELPENVKVIYLEDLK 748 (1146)
T ss_pred EEECCCchHHHHHHHHHHHcCCEEEEeCCCcCHHHHHHHHHHcCCCEEEEcHHHHHHHhccCCchhcccCceEEEeehhc
Confidence 99999999999999999999999999999999999999999999999999987766554211 1223333444443221
Q ss_pred CCccCCccCCCCCceEeeHHHHHhcCCCC-----CCCCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHHHHHHHhhC
Q 004977 237 SEKDSGVSGGISNWTVSSFSEVEKLGKRS-----PVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLI 311 (721)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~ 311 (721)
... .....+.+........ ........++|+++|+|||||||.||||++||+++.+.+......+
T Consensus 749 ~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~ 818 (1146)
T PRK08633 749 AKI----------SKVDKLTALLAARLLPARLLKRLYGPTFKPDDTATIIFSSGSEGEPKGVMLSHHNILSNIEQISDVF 818 (1146)
T ss_pred ccc----------chhHHHHHHHHhccCCHHHHHhhccCCCCCCCEEEEEECCCCCCCCceEEechHHHHHHHHHHHHhc
Confidence 100 0001122211110000 0001345679999999999999999999999999999998888887
Q ss_pred CCCCCCcEEEeccChHHHHHHHH-HHHHHHhcceEeeCccccccccchhhccCccCcceeecceEEeechHHHHHHHHHH
Q 004977 312 PNPGRSDVYLAYLPLAHVLELAA-ESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGV 390 (721)
Q Consensus 312 ~~~~~~d~~l~~~pl~h~~g~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~ 390 (721)
++.++|++++.+|++|.+++.. .+.++..|+++++.... .+ ...+...++++++|++.++|++++.+.+..
T Consensus 819 -~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~g~~~v~~~~~--~~-----~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~ 890 (1146)
T PRK08633 819 -NLRNDDVILSSLPFFHSFGLTVTLWLPLLEGIKVVYHPDP--TD-----ALGIAKLVAKHRATILLGTPTFLRLYLRNK 890 (1146)
T ss_pred -CCCCCCEEEEcCcHHHHHhHHHHHHHHHHCCCEEEEeCCC--CC-----HHHHHHHHHHcCCeEEEecHHHHHHHHhcc
Confidence 8899999999999999999876 67789999998873211 01 112233399999999999999999886531
Q ss_pred HHHHHhhcchhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHHHHHHHhhC
Q 004977 391 VKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMG 470 (721)
Q Consensus 391 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~~~~~~g 470 (721)
.. .....+++|.+++||+++++++.+.+++.+|
T Consensus 891 ~~-----------------------------------------------~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~g 923 (1146)
T PRK08633 891 KL-----------------------------------------------HPLMFASLRLVVAGAEKLKPEVADAFEEKFG 923 (1146)
T ss_pred cc-----------------------------------------------CcccCCCeeeEEEcCCcCCHHHHHHHHHHhC
Confidence 10 0112258999999999999999999999899
Q ss_pred CccccccccccccccccccCCC----------CCCCCccCCCcCcceEEEEecCCCCcccCCCCCCcceEEEcccccccc
Q 004977 471 APIGQAYGLTETCAGSTFSEWD----------DPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAG 540 (721)
Q Consensus 471 ~~l~~~YG~TE~~~~~~~~~~~----------~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~g 540 (721)
+++++.||+||++.+++...++ ..+.+++|+|+||++++|+|++++..+ ++|+.|||+++|++++.|
T Consensus 924 ~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~d~~~~~~~---~~g~~Gel~v~g~~~~~g 1000 (1146)
T PRK08633 924 IRILEGYGATETSPVASVNLPDVLAADFKRQTGSKEGSVGMPLPGVAVRIVDPETFEEL---PPGEDGLILIGGPQVMKG 1000 (1146)
T ss_pred CCeecccccccCcceEEEecCcccccccccccCCCCCCccccCCCCEEEEEcCCCCccC---CCCCceEEEEcCCCcccc
Confidence 9999999999998776544321 124578999999999999997666654 588999999999999999
Q ss_pred ccCCCcccccccccCCCCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCc--ccceEEEEecC
Q 004977 541 YFNNPGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSD--YVDNIMIHADP 618 (721)
Q Consensus 541 Y~~~~~~t~~~f~~~~~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p--~V~~~~V~g~~ 618 (721)
|+++|+.|++.|.. .+++|||+|||+|++|+||+++++||.||+||+ +|++|+|.|||++|.+|| .+.+++|++.+
T Consensus 1001 Y~~~~~~t~~~~~~-~~~~~~~~TGD~~~~~~~g~l~~~gR~~d~i~~-~G~~v~~~eiE~~l~~~~~~~~~~~~v~~~~ 1078 (1146)
T PRK08633 1001 YLGDPEKTAEVIKD-IDGIGWYVTGDKGHLDEDGFLTITDRYSRFAKI-GGEMVPLGAVEEELAKALGGEEVVFAVTAVP 1078 (1146)
T ss_pred ccCCccchHHHhhc-CCCCCeEECCCEEEEcCCceEEEEecccchhhh-CcEEECHHHHHHHHHhccCCCCceEEEEecc
Confidence 99999999998852 235589999999999999999999999999997 699999999999999999 46689999988
Q ss_pred CCc---eEEEEEEcChHHHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCCCCCCCC
Q 004977 619 FHN---YCVALVVPSHKALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEPWTPEAG 695 (721)
Q Consensus 619 ~~~---~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~~~p~~~ 695 (721)
++. .+++++++.... .+++++++++.++|+|++|+.+++++++ |
T Consensus 1079 ~~~~g~~~~~~v~~~~~~----------------------------~~~l~~~~~~~~l~~~~~P~~i~~~~~i--P--- 1125 (1146)
T PRK08633 1079 DEKKGEKLVVLHTCGAED----------------------------VEELKRAIKESGLPNLWKPSRYFKVEAL--P--- 1125 (1146)
T ss_pred CCCCCcEEEEEEecCccC----------------------------HHHHHHHHHhcCCCcccCCcEEEEecCc--C---
Confidence 764 578888763211 1456666654689999999999999998 6
Q ss_pred ccCcccccChHHHHHHHHHH
Q 004977 696 LVTAALKIKREQLKAKFKDD 715 (721)
Q Consensus 696 ~~t~~gKi~R~~l~~~~~~~ 715 (721)
+|++||++|++|++..++.
T Consensus 1126 -~t~~GKi~r~~L~~~~~~~ 1144 (1146)
T PRK08633 1126 -LLGSGKLDLKGLKELALAL 1144 (1146)
T ss_pred -CCCCCCCcHHHHHHHHHHh
Confidence 9999999999999886654
No 74
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=100.00 E-value=3.3e-65 Score=574.71 Aligned_cols=502 Identities=24% Similarity=0.343 Sum_probs=409.5
Q ss_pred CHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEc
Q 004977 83 TMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAILA 162 (721)
Q Consensus 83 tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~ 162 (721)
+++++|++.++++|+++|+.+ +++ ++||+||.+++.++|+.|++.|+++|++|++++
T Consensus 1 ~~~~~~~~~~~~~p~~~a~~~------------~~~-----------~~ty~~l~~~v~~~a~~l~~~g~~~~~~V~i~~ 57 (515)
T TIGR03098 1 LLHHLLEDAAARLPDATALVH------------HDR-----------TLTYAALSERVLALASGLRGLGLARGERVAIYL 57 (515)
T ss_pred CHHHHHHHHHHHCCCCeEEEE------------CCc-----------eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEc
Confidence 478999999999999999986 333 699999999999999999999999999999999
Q ss_pred cCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccchhHHHhhhhcCCCccEEEEecCCCCCccCC
Q 004977 163 ETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEKDSG 242 (721)
Q Consensus 163 ~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~ 242 (721)
+|+++++++++||+++|++++|+++.++.+++..+++.++++++|++......+......++.+..++.++.......
T Consensus 58 ~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 135 (515)
T TIGR03098 58 DKRLETVTAMFGAALAGGVFVPINPLLKAEQVAHILADCNVRLLVTSSERLDLLHPALPGCHDLRTLILVGEPAHASE-- 135 (515)
T ss_pred CCCHHHHHHHHHHHhcCEEEEeCCCCCCHHHHHHHHHcCCCeEEEEccchhhhhHhhhhcccccceEEEecCcccccC--
Confidence 999999999999999999999999999999999999999999999998877766665556666667776654321110
Q ss_pred ccCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHHHHHHHhhCCCCCCCcEEEe
Q 004977 243 VSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNPGRSDVYLA 322 (721)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~d~~l~ 322 (721)
.......|+++....... .......+++++|+|||||||.||||++||+++...+......+ .+.++|++++
T Consensus 136 -----~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~-~~~~~d~~l~ 207 (515)
T TIGR03098 136 -----GGGESPSWPKLLALGDAD--PPHPVIDSDMAAILYTSGSTGRPKGVVLSHRNLVAGAQSVATYL-ENRPDDRLLA 207 (515)
T ss_pred -----CccccccHHHhhcccccc--ccCCCCcCCeEEEEECCCCCCCCceEEEecHHHHHHHHHHHHHh-CCCcccEEEE
Confidence 022334566655432211 22334568899999999999999999999999999988888777 8899999999
Q ss_pred ccChHHHHHHHHHHHHHHhcceEeeCccccccccchhhccCccCcceeecceEEeechHHHHHHHHHHHHHHHhhcchhh
Q 004977 323 YLPLAHVLELAAESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKGGLTK 402 (721)
Q Consensus 323 ~~pl~h~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~ 402 (721)
.+|++|.+++...+.++..|+++++.+... ...+...++++++|++.++|+++..+.+....
T Consensus 208 ~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~--------~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~---------- 269 (515)
T TIGR03098 208 VLPLSFDYGFNQLTTAFYVGATVVLHDYLL--------PRDVLKALEKHGITGLAAVPPLWAQLAQLDWP---------- 269 (515)
T ss_pred ECchhhHhHHHHHHHHHHcCCEEEEcCCCC--------HHHHHHHHHHcCCceEecChHHHHHHHhcccC----------
Confidence 999999999988889999999998843221 11223338999999999999999988642100
Q ss_pred HHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHHHHHHHhh-CCcccccccccc
Q 004977 403 NLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICM-GAPIGQAYGLTE 481 (721)
Q Consensus 403 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~~~~~~-g~~l~~~YG~TE 481 (721)
....+++|.+++||+++++++.+.+++.+ ++.+++.||+||
T Consensus 270 --------------------------------------~~~~~~l~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~YG~tE 311 (515)
T TIGR03098 270 --------------------------------------ESAAPSLRYLTNSGGAMPRATLSRLRSFLPNARLFLMYGLTE 311 (515)
T ss_pred --------------------------------------CCCccceEEEEecCCcCCHHHHHHHHHHCCCCeEeeeecccc
Confidence 00124899999999999999999998887 688999999999
Q ss_pred ccccccccCCC-CCCCCccCCCcCcceEEEEecCCCCcccCCCCCCcceEEEccccccccccCCCcccccccccCCC---
Q 004977 482 TCAGSTFSEWD-DPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVDER--- 557 (721)
Q Consensus 482 ~~~~~~~~~~~-~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~~~--- 557 (721)
++......... ..+.+++|+|+|+++++|+| +++..+ +.|+.|||+++|+.++.|||++++.|.+.|.....
T Consensus 312 ~~~~~~~~~~~~~~~~~~vG~~~~~~~~~i~~-~~~~~~---~~~~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~~ 387 (515)
T TIGR03098 312 AFRSTYLPPEEVDRRPDSIGKAIPNAEVLVLR-EDGSEC---APGEEGELVHRGALVAMGYWNDPEKTAERFRPLPPRPG 387 (515)
T ss_pred ccceEecccccccCCCCCcceecCCCEEEEEC-CCCCCC---CCCCceEEEEcCchhhccccCCchhhhhhhhccCCccc
Confidence 97654433221 23458999999999999998 556544 47889999999999999999999999887752110
Q ss_pred ----CcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcccceEEEEecCCC---ceEEEEEEcC
Q 004977 558 ----GMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYVDNIMIHADPFH---NYCVALVVPS 630 (721)
Q Consensus 558 ----g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~~a~vv~~ 630 (721)
+.+||+|||+|++|+||++++.||.||+||+ +|++|+|.+||++|.+||.|.+|+|++.+++ +.+++++++.
T Consensus 388 ~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~-~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~~~~~ 466 (515)
T TIGR03098 388 ELHLPELAVWSGDTVRRDEEGFLYFVGRRDEMIKT-SGYRVSPTEVEEVAYATGLVAEAVAFGVPDPTLGQAIVLVVTPP 466 (515)
T ss_pred cccccccceeccceEEEcCCceEEEEeccccceec-CCEEeCHHHHHHHHhcCCCeeEEEEEeccCcccCceEEEEEEeC
Confidence 1259999999999999999999999999997 6999999999999999999999999998764 3577887754
Q ss_pred hHHHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCCCCCCCCccCcccccChHHHHH
Q 004977 631 HKALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEPWTPEAGLVTAALKIKREQLKA 710 (721)
Q Consensus 631 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~~~p~~~~~t~~gKi~R~~l~~ 710 (721)
.... . + .++++++++ ++|+++++|..+++++++ | +|++||++|++|++
T Consensus 467 ~~~~--------~--~---------------~~~l~~~l~-~~l~~~~~p~~i~~v~~i--P----~t~~GK~~r~~L~~ 514 (515)
T TIGR03098 467 GGEE--------L--D---------------RAALLAECR-ARLPNYMVPALIHVRQAL--P----RNANGKIDRKALAA 514 (515)
T ss_pred CCCC--------C--C---------------HHHHHHHHH-hhCccccCCCEEEEeccC--C----CCCCCCCcHHHhcc
Confidence 3210 0 0 256888888 899999999999999997 6 99999999999974
No 75
>PRK12583 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=4.4e-65 Score=579.30 Aligned_cols=507 Identities=24% Similarity=0.337 Sum_probs=404.8
Q ss_pred CCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEE
Q 004977 82 STMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAIL 161 (721)
Q Consensus 82 ~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~ 161 (721)
.|+.++|++.++++|+++|+++.+ ++ +.+||+||.++++++|++|.+.|+++||+|+|+
T Consensus 18 ~~l~~~l~~~~~~~p~~~a~~~~~----------~~-----------~~~Ty~~l~~~~~~~a~~L~~~gi~~g~~V~i~ 76 (558)
T PRK12583 18 QTIGDAFDATVARFPDREALVVRH----------QA-----------LRYTWRQLADAVDRLARGLLALGVQPGDRVGIW 76 (558)
T ss_pred CcHHHHHHHHHHHCCCCeEEEecC----------CC-----------cEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEE
Confidence 589999999999999999998742 22 369999999999999999999999999999999
Q ss_pred ccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccch-----hHHHhhhh-------------cC
Q 004977 162 AETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQL-----KKLSAVSS-------------SL 223 (721)
Q Consensus 162 ~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~-----~~~~~~~~-------------~~ 223 (721)
++|+++|+++++||+++|++++|+++.++.+++.+++++++++++|+++... ..+..... ..
T Consensus 77 ~~~~~~~~~~~~a~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (558)
T PRK12583 77 APNCAEWLLTQFATARIGAILVNINPAYRASELEYALGQSGVRWVICADAFKTSDYHAMLQELLPGLAEGQPGALACERL 156 (558)
T ss_pred CCCChHHHHHHHHHHhhCCEEEecCCCCCHHHHHHHHHhcCCcEEEEeccccccchhHHHHHHhhhhccccccccccccC
Confidence 9999999999999999999999999999999999999999999999986432 22222111 12
Q ss_pred CCccEEEEecCCCCCccCCccCCCCCceEeeHHHHHhcCCCC-----CCCCCCCCCCCeEEEEeccCCCCCcchheeccH
Q 004977 224 KTIKNVIYFENDGSEKDSGVSGGISNWTVSSFSEVEKLGKRS-----PVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHG 298 (721)
Q Consensus 224 ~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~ 298 (721)
+.+..++..+.... .....|+++...+... ........++++++++|||||||.||||++||+
T Consensus 157 ~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGsTG~PK~v~~s~~ 224 (558)
T PRK12583 157 PELRGVVSLAPAPP------------PGFLAWHELQARGETVSREALAERQASLDRDDPINIQYTSGTTGFPKGATLSHH 224 (558)
T ss_pred CcceEEEEecCCCC------------ccccchHhhhhcccccccccccccccccCCCCcEEEEECCCCCCCCceEEeeHH
Confidence 33344444332211 1123344443322111 001123457889999999999999999999999
Q ss_pred HHHHHHHHHHhhCCCCCCCcEEEeccChHHHHHHHH-HHHHHHhcceEeeCccccccccchhhccCccCcceeecceEEe
Q 004977 299 NIVATAAAIKTLIPNPGRSDVYLAYLPLAHVLELAA-ESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMA 377 (721)
Q Consensus 299 ~l~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~ 377 (721)
++.+.+......+ ++.++|++++.+|++|.+|... .+.++..|+++++.... .+. ..+...++++++|+++
T Consensus 225 ~l~~~~~~~~~~~-~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~v~~~~~~--~~~-----~~~~~~i~~~~~t~l~ 296 (558)
T PRK12583 225 NILNNGYFVAESL-GLTEHDRLCVPVPLYHCFGMVLANLGCMTVGACLVYPNEA--FDP-----LATLQAVEEERCTALY 296 (558)
T ss_pred HHHHHHHHHHHHh-CCCCCCeEEEecCchhhhhHHHHHHHHHhcCceEEeecCC--CCH-----HHHHHHHHHcCCeEEe
Confidence 9999888888777 8899999999999999999866 66778899998863211 111 1122338999999999
Q ss_pred echHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCC
Q 004977 378 AVPAIFDRVREGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPL 457 (721)
Q Consensus 378 ~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l 457 (721)
++|+++..+...... .....+++|.+++||+++
T Consensus 297 ~~P~~~~~l~~~~~~-----------------------------------------------~~~~~~~lr~i~~~G~~~ 329 (558)
T PRK12583 297 GVPTMFIAELDHPQR-----------------------------------------------GNFDLSSLRTGIMAGAPC 329 (558)
T ss_pred ccHHHHHHHHccccc-----------------------------------------------cCCCchhheEEEecCCCC
Confidence 999998876542110 001124899999999999
Q ss_pred CHHHHHHHHHhhC-CccccccccccccccccccCCC---CCCCCccCCCcCcceEEEEecCCCCcccCCCCCCcceEEEc
Q 004977 458 SADSQRFINICMG-APIGQAYGLTETCAGSTFSEWD---DPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVG 533 (721)
Q Consensus 458 ~~~~~~~~~~~~g-~~l~~~YG~TE~~~~~~~~~~~---~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~ 533 (721)
++++.+.+.+.++ ..+++.||+||++.+++..... ..+..++|+|+|++.++|+|++ +.. ++.|+.|||+|+
T Consensus 330 ~~~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~p~~~~~~~i~d~~-~~~---~~~g~~Gel~v~ 405 (558)
T PRK12583 330 PIEVMRRVMDEMHMAEVQIAYGMTETSPVSLQTTAADDLERRVETVGRTQPHLEVKVVDPD-GAT---VPRGEIGELCTR 405 (558)
T ss_pred CHHHHHHHHHHcCCcceeccccccccccceeccCcccccccccCCCCccCCCCeEEEECCC-CCC---CCCCCeeEEEEE
Confidence 9999988888776 4799999999999876654322 2245799999999999999954 554 457899999999
Q ss_pred cccccccccCCCcccccccccCCCCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcccceEE
Q 004977 534 GFNVTAGYFNNPGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYVDNIM 613 (721)
Q Consensus 534 g~~v~~gY~~~~~~t~~~f~~~~~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~~~~ 613 (721)
|+.++.||+++++.+.+.|. .+ +||+|||+|++++||++++.||.||+||+ +|++|+|.+||++|.++|+|.+++
T Consensus 406 g~~~~~gy~~~~~~~~~~~~--~~--~~~~TGDl~~~~~dg~l~i~GR~~~~i~~-~G~~v~~~~IE~~l~~~~~v~~~~ 480 (558)
T PRK12583 406 GYSVMKGYWNNPEATAESID--ED--GWMHTGDLATMDEQGYVRIVGRSKDMIIR-GGENIYPREIEEFLFTHPAVADVQ 480 (558)
T ss_pred eCccchhhcCChHHHHhhcC--CC--CCeeccceEEECCCccEEEEecccceeEE-CCEEeCHHHHHHHHHhCCCeeEEE
Confidence 99999999999999988875 45 89999999999999999999999999996 699999999999999999999999
Q ss_pred EEecCCC---ceEEEEEEcChHHHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCCC
Q 004977 614 IHADPFH---NYCVALVVPSHKALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEPW 690 (721)
Q Consensus 614 V~g~~~~---~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~~ 690 (721)
|++.++. ..++++|++.++. .. ..++|+++++ ++|+.|++|..+++++++
T Consensus 481 v~~~~~~~~~~~~~~~v~~~~~~----------~~---------------~~~~i~~~~~-~~L~~~~~P~~i~~v~~l- 533 (558)
T PRK12583 481 VFGVPDEKYGEEIVAWVRLHPGH----------AA---------------SEEELREFCK-ARIAHFKVPRYFRFVDEF- 533 (558)
T ss_pred EEeeecCCCCcEEEEEEEECCCC----------CC---------------CHHHHHHHHH-hhcccCcCCcEEEEeccC-
Confidence 9998765 3588888876431 00 0257888888 899999999999999987
Q ss_pred CCCCCccCcccccChHHHHHHHHHHHH
Q 004977 691 TPEAGLVTAALKIKREQLKAKFKDDLQ 717 (721)
Q Consensus 691 ~p~~~~~t~~gKi~R~~l~~~~~~~i~ 717 (721)
| +|++||++|++|++++.++++
T Consensus 534 -P----~t~sGK~~r~~L~~~~~~~~~ 555 (558)
T PRK12583 534 -P----MTVTGKVQKFRMREISIEELA 555 (558)
T ss_pred -C----CCCCCCccHHHHHHHHHhhcC
Confidence 6 999999999999999887654
No 76
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=100.00 E-value=7.9e-65 Score=572.99 Aligned_cols=499 Identities=18% Similarity=0.259 Sum_probs=401.5
Q ss_pred CCCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEE
Q 004977 81 ASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAI 160 (721)
Q Consensus 81 ~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i 160 (721)
..++.++|+++++ |+++|+++ +++ .+||+||.++++++|++|.+.|+++|++|++
T Consensus 24 ~~~~~~~~~~~a~--p~~~a~~~------------~~~-----------~~Ty~el~~~~~~la~~L~~~g~~~g~~V~v 78 (536)
T PRK10946 24 DLPLTDILTRHAA--SDAIAVIC------------GER-----------QFSYRELNQASDNLACSLRRQGIKPGDTALV 78 (536)
T ss_pred CccHHHHHHHhhC--CCCeEEEe------------CCC-----------cccHHHHHHHHHHHHHHHHHcCCCCCCEEEE
Confidence 4689999999887 99999985 332 6999999999999999999999999999999
Q ss_pred EccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccch-----hHHHhhhhcCCCccEEEEecCC
Q 004977 161 LAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQL-----KKLSAVSSSLKTIKNVIYFEND 235 (721)
Q Consensus 161 ~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~-----~~~~~~~~~~~~~~~ii~~~~~ 235 (721)
+++|+++|+++++||+++|++++++.+.....++..++++++++++++++... .....+....+.++.++..+..
T Consensus 79 ~~~n~~~~~~~~la~~~~G~v~v~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 158 (536)
T PRK10946 79 QLGNVAEFYITFFALLKLGVAPVNALFSHQRSELNAYASQIEPALLIADRQHALFSDDDFLNTLVAEHSSLRVVLLLNDD 158 (536)
T ss_pred ECCChHHHHHHHHHHHHcCeEEecCCccccHHHHHHHHhhcCCCEEEEeccccccchHHHHHHHHhhCCCceEEEEecCC
Confidence 99999999999999999999888777777888999999999999999986531 2233333445556655553321
Q ss_pred CCCccCCccCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHHHHHHHhhCCCCC
Q 004977 236 GSEKDSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNPG 315 (721)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~ 315 (721)
. ...+.++...... ........++++++++|||||||.||||++||+++...+......+ .+.
T Consensus 159 ~---------------~~~~~~~~~~~~~-~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~-~~~ 221 (536)
T PRK10946 159 G---------------EHSLDDAINHPAE-DFTATPSPADEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEIC-GFT 221 (536)
T ss_pred C---------------CccHHHHhhCccc-ccccCCCCCCCeEEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhc-CCC
Confidence 0 1223333332211 1112344678999999999999999999999999999998888777 889
Q ss_pred CCcEEEeccChHHHHHHHH--HHHHHHhcceEeeCccccccccchhhccCccCcceeecceEEeechHHHHHHHHHHHHH
Q 004977 316 RSDVYLAYLPLAHVLELAA--ESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKK 393 (721)
Q Consensus 316 ~~d~~l~~~pl~h~~g~~~--~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~ 393 (721)
++|++++.+|++|.+++.. .+.++..|+++++...... ..++..++++++|++.++|++++.+.+.....
T Consensus 222 ~~~~~l~~~p~~h~~~~~~~~~~~~l~~g~~~~~~~~~~~--------~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~ 293 (536)
T PRK10946 222 PQTRYLCALPAAHNYPMSSPGALGVFLAGGTVVLAPDPSA--------TLCFPLIEKHQVNVTALVPPAVSLWLQAIAEG 293 (536)
T ss_pred CCceEEEecCccccccchhhhHHHHhhcCcEEEECCCCCH--------HHHHHHHHHhCCcEEEeChHHHHHHHhhhccc
Confidence 9999999999999988753 5677999999988432211 11223389999999999999999987642111
Q ss_pred HHhhcchhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHHHHHHHhhCCcc
Q 004977 394 VEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMGAPI 473 (721)
Q Consensus 394 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~~~~~~g~~l 473 (721)
.. ....+++|.+++||+++++++.+.+.+.+|+++
T Consensus 294 ~~---------------------------------------------~~~~~~l~~v~~gg~~l~~~~~~~~~~~~g~~~ 328 (536)
T PRK10946 294 GS---------------------------------------------RAQLASLKLLQVGGARLSETLARRIPAELGCQL 328 (536)
T ss_pred Cc---------------------------------------------cccccceeEEEECCCCCCHHHHHHHHHhcCCeE
Confidence 00 001148999999999999999999988889999
Q ss_pred ccccccccccccccccCC-CCCCCCccCCCc-CcceEEEEecCCCCcccCCCCCCcceEEEccccccccccCCCcccccc
Q 004977 474 GQAYGLTETCAGSTFSEW-DDPSVGRVGPPV-PCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEV 551 (721)
Q Consensus 474 ~~~YG~TE~~~~~~~~~~-~~~~~~~vG~p~-p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~ 551 (721)
++.||+||++...+.... .....+++|+|+ |+++++|+| ++++. +++|+.|||+++|+.++.||+++++.|.+.
T Consensus 329 ~~~YG~tE~~~~~~~~~~~~~~~~~~~G~p~~~~~~v~i~d-~~~~~---~~~g~~Gel~v~g~~~~~GY~~~~~~t~~~ 404 (536)
T PRK10946 329 QQVFGMAEGLVNYTRLDDSDERIFTTQGRPMSPDDEVWVAD-ADGNP---LPQGEVGRLMTRGPYTFRGYYKSPQHNASA 404 (536)
T ss_pred EEeecccccceeeecCCCccccccccCCcccCCCceEEEEC-CCCCC---CCCCCccEEEEecCccchhhcCCcccchhh
Confidence 999999997654432221 122347899999 899999999 56654 448899999999999999999999999999
Q ss_pred cccCCCCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcccceEEEEecCCC---ceEEEEEE
Q 004977 552 YKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYVDNIMIHADPFH---NYCVALVV 628 (721)
Q Consensus 552 f~~~~~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~~a~vv 628 (721)
|. .+ +||+|||+|++|+||+++++||.+|+||+ +|++|+|.+||++|.+||+|.+++|++.++. ..++|+|+
T Consensus 405 ~~--~d--~~~~TGDl~~~d~~G~l~~~gR~~d~i~~-~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~~~~g~~~~a~vv 479 (536)
T PRK10946 405 FD--AN--GFYCSGDLVSIDPDGYITVVGREKDQINR-GGEKIAAEEIENLLLRHPAVIHAALVSMEDELMGEKSCAFLV 479 (536)
T ss_pred cc--cC--CceecCceEEECCCCcEEEeccccceeec-CCEEEcHHHHHHHHHhCCCcceEEEEcCCCcccCceEEEEEE
Confidence 86 56 89999999999999999999999999996 6999999999999999999999999998865 35788888
Q ss_pred cChHHHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCCCCCCCCccCcccccChHHH
Q 004977 629 PSHKALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEPWTPEAGLVTAALKIKREQL 708 (721)
Q Consensus 629 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~~~p~~~~~t~~gKi~R~~l 708 (721)
+.+.. + .+++++++++.+|++|++|..+.+++++ | +|++||++|++|
T Consensus 480 ~~~~~----------~-----------------~~~l~~~~~~~~l~~~~~P~~~~~~~~i--P----~t~~GKv~r~~L 526 (536)
T PRK10946 480 VKEPL----------K-----------------AVQLRRFLREQGIAEFKLPDRVECVDSL--P----LTAVGKVDKKQL 526 (536)
T ss_pred eCCCC----------C-----------------HHHHHHHHHhCCccccccCcEEEEeccC--C----CCCCCcccHHHH
Confidence 76421 0 1567788873359999999999999987 6 999999999999
Q ss_pred HHHHHHHH
Q 004977 709 KAKFKDDL 716 (721)
Q Consensus 709 ~~~~~~~i 716 (721)
++++++..
T Consensus 527 ~~~~~~~~ 534 (536)
T PRK10946 527 RQWLASRA 534 (536)
T ss_pred HHHHHhhc
Confidence 99887654
No 77
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=3.9e-66 Score=581.85 Aligned_cols=484 Identities=21% Similarity=0.303 Sum_probs=357.5
Q ss_pred HHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcc
Q 004977 84 MAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAE 163 (721)
Q Consensus 84 l~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~ 163 (721)
+.+.|+++++++|+++|+++. ++ +.++++||+||.++++++|++|.++ ++||+|+|+++
T Consensus 4 ~~~~l~~~~~~~~~~~a~~~~-----------~~--------~~~~~~ty~el~~~~~~lA~~L~~~--~~g~~V~l~~~ 62 (525)
T PRK05851 4 LAAALSDAMTASGRDLVVLDR-----------ES--------GLWRRHPWPEVHGRAENVAARLLDR--DRPGAVGLVGE 62 (525)
T ss_pred HHHHHHHHhcCCCCceEEeCC-----------CC--------CcceeecHHHHHHHHHHHHHHHHhc--CCCCeEEEEcC
Confidence 889999999999999999853 21 2356899999999999999999988 89999999999
Q ss_pred CcHhHHHHHHHHHhcCCEEEEecCC--------CCHHHHHHHHHhcCceEEEECccchhHHHhhhhcCCCccEEEEecCC
Q 004977 164 TCVEWFIAFQGCFRQSITVVTIYSS--------LGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFEND 235 (721)
Q Consensus 164 n~~e~~~~~lA~~~~G~~~vpl~~~--------~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~ii~~~~~ 235 (721)
|++++++++|||+++|++++ +++. ...+++.+++++++++++|++......+...... + .+.+
T Consensus 63 ~~~e~~~~~la~~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~---~----~~~~- 133 (525)
T PRK05851 63 PTVELVAAIQGAWLAGAAVS-ILPGPVRGADDGRWADATLTRFAGIGVRTVLSHGSHLERLRAVDSS---V----TVHD- 133 (525)
T ss_pred CCHHHHHHHHHHHHcCCCCc-CCCCCCCccchhhHHHHHHHHHHhcCCCEEEeCHHHHHHHHHhhcc---c----cccc-
Confidence 99999999999999999865 4432 2235666789999999999987765544332111 0 0000
Q ss_pred CCCccCCccCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHHHHHHHhhCCCCC
Q 004977 236 GSEKDSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNPG 315 (721)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~ 315 (721)
+......... .......++|+++|+|||||||.||||++||+++.+.+......+ ++.
T Consensus 134 -------------------~~~~~~~~~~--~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~~-~~~ 191 (525)
T PRK05851 134 -------------------LATAAHTNRS--ASLTPPDSGGPAVLQGTAGSTGTPRTAILSPGAVLSNLRGLNARV-GLD 191 (525)
T ss_pred -------------------cccccccccc--ccCCCCCCCCeEEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHHh-CCC
Confidence 0000000000 001224678999999999999999999999999999998888877 888
Q ss_pred -CCcEEEeccChHHHHHHHHHHHHHHhcceEeeCccccccccchhhccCccCcceeecceEEeechHHHHHHHHHHHHHH
Q 004977 316 -RSDVYLAYLPLAHVLELAAESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKV 394 (721)
Q Consensus 316 -~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~ 394 (721)
++|++++++|++|++++...+.+++.|+++++.+...+... +..+...+.++++|++..+|.++..+.+.. ...
T Consensus 192 ~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~~~~~~~~~~~~----~~~~~~~i~~~~~t~~~~p~~~~~~l~~~~-~~~ 266 (525)
T PRK05851 192 AATDVGCSWLPLYHDMGLAFLLTAALAGAPLWLAPTTAFSAS----PFRWLSWLSDSRATLTAAPNFAYNLIGKYA-RRV 266 (525)
T ss_pred CCCCeEEEcCCCccCccHHHHHHHHHcCCeEEEcCHHHHHHC----HHHHHHHHHHhCCeEEeCCcHHHHHHHHhh-ccc
Confidence 89999999999999999888889999999988543221111 111233388999998755554444432210 000
Q ss_pred HhhcchhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHHHHHHHh---hCC
Q 004977 395 EEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINIC---MGA 471 (721)
Q Consensus 395 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~~~~~---~g~ 471 (721)
.....++||.+++||+++++++.+.+.+. +|.
T Consensus 267 ---------------------------------------------~~~~l~~lr~~~~gG~~l~~~~~~~~~~~~~~~g~ 301 (525)
T PRK05851 267 ---------------------------------------------SDVDLGALRVALNGGEPVDCDGFERFATAMAPFGF 301 (525)
T ss_pred ---------------------------------------------cCCCHHHhheeEeccccCCHHHHHHHHHHHhhcCC
Confidence 00112479999999999999998877764 354
Q ss_pred ---ccccccccccccccccccCCC---------------CCCCCccCCCcCcceEEEEecCCCCcccCCCCCCcceEEEc
Q 004977 472 ---PIGQAYGLTETCAGSTFSEWD---------------DPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVG 533 (721)
Q Consensus 472 ---~l~~~YG~TE~~~~~~~~~~~---------------~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~ 533 (721)
.++|.||+||++..++...+. ..+.+++|+|+||++++|+|.+.+.. ++.|+.|||+|+
T Consensus 302 ~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~g~~v~i~d~~~~~~---~~~g~~GEl~v~ 378 (525)
T PRK05851 302 DAGAAAPSYGLAESTCAVTVPVPGIGLRVDEVTTDDGSGARRHAVLGNPIPGMEVRISPGDGAAG---VAGREIGEIEIR 378 (525)
T ss_pred ChhhcccccchhhhceEEEecCCCCCceeeeeccccCcccceeeeecCCCCCcEEEEECCCCCcc---CCCCCeEEEEEe
Confidence 499999999998765543221 11336899999999999998433322 457899999999
Q ss_pred cccccccccCCCcccccccccCCCCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcccceEE
Q 004977 534 GFNVTAGYFNNPGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYVDNIM 613 (721)
Q Consensus 534 g~~v~~gY~~~~~~t~~~f~~~~~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~~~~ 613 (721)
|++++.|||++|+.+ .+ |||+|||+|+++ +|+|+|+||+||+||+ +|+||+|.|||++|.+||+|.+|+
T Consensus 379 g~~~~~GY~~~~~~~-------~~--~~~~TGDl~~~~-~G~l~~~GR~dd~i~~-~G~~v~p~eIE~~l~~~p~V~~~~ 447 (525)
T PRK05851 379 GASMMSGYLGQAPID-------PD--DWFPTGDLGYLV-DGGLVVCGRAKELITV-AGRNIFPTEIERVAAQVRGVREGA 447 (525)
T ss_pred cCchhhccccCCccC-------CC--CceeccceEEEE-CCEEEEEeecCCEEEE-CCEEeCHHHHHHHHHhCCCcccce
Confidence 999999999998642 34 899999999997 8999999999999998 699999999999999999999999
Q ss_pred EEecCCCc---eEEEEEEcChHHHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeC--C
Q 004977 614 IHADPFHN---YCVALVVPSHKALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMP--E 688 (721)
Q Consensus 614 V~g~~~~~---~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~--~ 688 (721)
|++.+++. .+.++|+..... .+ . +.+.+.+++.+. ..+ +++|+.+++++ +
T Consensus 448 vv~~~~~~~~~~~~~~v~~~~~~---------~~---------~----~~~~~~~~~~l~-~~l--~~~P~~~~~v~~~~ 502 (525)
T PRK05851 448 VVAVGTGEGSARPGLVIAAEFRG---------PD---------E----AGARSEVVQRVA-SEC--GVVPSDVVFVAPGS 502 (525)
T ss_pred EEEEEecCCCCceeEEEEEEecC---------cc---------h----HHHHHHHHHHHH-HHh--CCCccEEEEECCCC
Confidence 99876543 355555432110 00 0 112233433333 222 28999999998 5
Q ss_pred CCCCCCCccCcccccChHHHHHHHHH
Q 004977 689 PWTPEAGLVTAALKIKREQLKAKFKD 714 (721)
Q Consensus 689 ~~~p~~~~~t~~gKi~R~~l~~~~~~ 714 (721)
+ | +|++|||+|++|++.+++
T Consensus 503 l--P----~t~~GKi~r~~L~~~~~~ 522 (525)
T PRK05851 503 L--P----RTSSGKLRRLAVKRSLEA 522 (525)
T ss_pred c--C----cCcchHHHHHHHHHHHHh
Confidence 5 6 999999999999988764
No 78
>PRK06164 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.2e-64 Score=572.89 Aligned_cols=511 Identities=21% Similarity=0.288 Sum_probs=402.4
Q ss_pred CCCCCCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCCCE
Q 004977 78 WKGASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTR 157 (721)
Q Consensus 78 ~~~~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~ 157 (721)
.+...++.++|.++++++|+++|+.. +++ .+||+||.+++.++|+.|.+.|+++||+
T Consensus 6 ~~~~~~l~~~l~~~a~~~p~~~a~~~------------~~~-----------~~Ty~~L~~~~~~~a~~L~~~g~~~g~~ 62 (540)
T PRK06164 6 APRADTLASLLDAHARARPDAVALID------------EDR-----------PLSRAELRALVDRLAAWLAAQGVRRGDR 62 (540)
T ss_pred ccCCCCHHHHHHHHHHhCCCCeEEec------------CCC-----------cccHHHHHHHHHHHHHHHHHhCCCCCCE
Confidence 34557999999999999999999973 222 6999999999999999999999999999
Q ss_pred EEEEccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccch-----hHHHhhhh-cCCCccEEEE
Q 004977 158 AAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQL-----KKLSAVSS-SLKTIKNVIY 231 (721)
Q Consensus 158 V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~-----~~~~~~~~-~~~~~~~ii~ 231 (721)
|+++++|+++|+++++||+++|++++|+++..+.+++.+++++++++++|++++.. +.+..... ..+.++.++.
T Consensus 63 V~i~~~n~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~i~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (540)
T PRK06164 63 VAVWLPNCIEWVVLFLACARLGATVIAVNTRYRSHEVAHILGRGRARWLVVWPGFKGIDFAAILAAVPPDALPPLRAIAV 142 (540)
T ss_pred EEEEcCCcHHHHHHHHHHHHhCcEEEecCCCCCcHHHHHHHHhcCccEEEEccccccccHHHHhhcccccccCCcceEEE
Confidence 99999999999999999999999999999999999999999999999999987642 22222221 1344555665
Q ss_pred ecCCCCCccCCccCCCCCceEeeHHHHHhcCCCCC---CCCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHHHHHHH
Q 004977 232 FENDGSEKDSGVSGGISNWTVSSFSEVEKLGKRSP---VDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIK 308 (721)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~ 308 (721)
++....... . .....+.++........ .......++++++++|||||||.||||++||+++.+.+....
T Consensus 143 ~~~~~~~~~----~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~ 214 (540)
T PRK06164 143 VDDAADATP----A----PAPGARVQLFALPDPAPPAAAGERAADPDAGALLFTTSGTTSGPKLVLHRQATLLRHARAIA 214 (540)
T ss_pred eccCcccCC----C----CCcccccccccccccCCcccccccCCCCCceEEEEECCCCCCCCcEEEEehHHHHHHHHHHH
Confidence 542111000 0 00000111111000000 001233568899999999999999999999999999998888
Q ss_pred hhCCCCCCCcEEEeccChHHHHHHHHHHHHHHhcceEeeCccccccccchhhccCccCcceeecceEEeechHHHHHHHH
Q 004977 309 TLIPNPGRSDVYLAYLPLAHVLELAAESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVRE 388 (721)
Q Consensus 309 ~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~ 388 (721)
..+ ++.+++++++.+|++|.+|+...+.++..|+++++.+.... ..++..++++++|+++++|+++..+.+
T Consensus 215 ~~~-~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~~~~~--------~~~~~~l~~~~~t~~~~~p~~l~~l~~ 285 (540)
T PRK06164 215 RAY-GYDPGAVLLAALPFCGVFGFSTLLGALAGGAPLVCEPVFDA--------ARTARALRRHRVTHTFGNDEMLRRILD 285 (540)
T ss_pred Hhc-CCCCCCEEEEcCCchhHHHHHHHHHHHhcCceEEecCCCCH--------HHHHHHHHHhCCeeecCCHHHHHHHHH
Confidence 888 88999999999999999999888889999999988443211 122333899999999999999999876
Q ss_pred HHHHHHHhhcchhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecC-CCCCHHHHHHHHH
Q 004977 389 GVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGG-APLSADSQRFINI 467 (721)
Q Consensus 389 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG-~~l~~~~~~~~~~ 467 (721)
... . ....++++.+.++| .+.+.++.+++..
T Consensus 286 ~~~----~--------------------------------------------~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 317 (540)
T PRK06164 286 TAG----E--------------------------------------------RADFPSARLFGFASFAPALGELAALARA 317 (540)
T ss_pred hhc----c--------------------------------------------cCCCcceeeeeeccCCcchHHHHHHHhh
Confidence 410 0 00124788776665 5666667777766
Q ss_pred hhCCccccccccccccccccccCCCCC---CCCccCCCc-CcceEEEEecCCCCcccCCCCCCcceEEEccccccccccC
Q 004977 468 CMGAPIGQAYGLTETCAGSTFSEWDDP---SVGRVGPPV-PCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFN 543 (721)
Q Consensus 468 ~~g~~l~~~YG~TE~~~~~~~~~~~~~---~~~~vG~p~-p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~ 543 (721)
. |+++++.||+||++.+++....... ...++|.|+ ++++++|+|++++..+ +.|+.|||||+|++++.||++
T Consensus 318 ~-~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~---~~g~~Gel~v~g~~~~~gY~~ 393 (540)
T PRK06164 318 R-GVPLTGLYGSSEVQALVALQPATDPVSVRIEGGGRPASPEARVRARDPQDGALL---PDGESGEIEIRAPSLMRGYLD 393 (540)
T ss_pred c-CCceecceeeccccceeeccCCCCCCcceeccCccccCCCeEEEEecCCCCcCC---CCCCeeEEEEecccccccccC
Confidence 5 8999999999999877665443221 235678876 8999999997666654 478999999999999999999
Q ss_pred CCcccccccccCCCCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcccceEEEEecCCC--c
Q 004977 544 NPGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYVDNIMIHADPFH--N 621 (721)
Q Consensus 544 ~~~~t~~~f~~~~~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~--~ 621 (721)
+|+.|.+.|. .+ |||+|||+|++|++|.+++.||.||+||+ +|++|+|.+||++|.+||+|.+++|++.+.. .
T Consensus 394 ~~~~t~~~~~--~~--~~~~TGDl~~~~~~g~l~~~GR~~~~i~~-~G~~i~p~eIE~~l~~~~~v~~~~v~~~~~~~~~ 468 (540)
T PRK06164 394 NPDATARALT--DD--GYFRTGDLGYTRGDGQFVYQTRMGDSLRL-GGFLVNPAEIEHALEALPGVAAAQVVGATRDGKT 468 (540)
T ss_pred Cchhhhhccc--CC--CceecCCeEEEcCCceEEEEeecCCeEEE-CCEEcCHHHHHHHHHhCCCceeEEEEecCCCCce
Confidence 9999999986 56 89999999999999999999999999998 5999999999999999999999999997643 3
Q ss_pred eEEEEEEcChHHHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCCCCCCCCccCccc
Q 004977 622 YCVALVVPSHKALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEPWTPEAGLVTAAL 701 (721)
Q Consensus 622 ~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~~~p~~~~~t~~g 701 (721)
.+++++++.++. .. -.+++.++++ .+||+|++|+.|++++.+ | +|++|
T Consensus 469 ~~~~~vv~~~~~----------~~---------------~~~~l~~~~~-~~l~~~~~P~~i~~~~~~--P----~t~~g 516 (540)
T PRK06164 469 VPVAFVIPTDGA----------SP---------------DEAGLMAACR-EALAGFKVPARVQVVEAF--P----VTESA 516 (540)
T ss_pred eEEEEEEeCCCC----------CC---------------CHHHHHHHHH-hhcccCcCCcEEEEecCC--C----CCCCC
Confidence 688999876532 00 0257778888 899999999999999987 6 89998
Q ss_pred ---ccChHHHHHHHHHHHH
Q 004977 702 ---KIKREQLKAKFKDDLQ 717 (721)
Q Consensus 702 ---Ki~R~~l~~~~~~~i~ 717 (721)
|++|+.|++++++.+.
T Consensus 517 ~~~Ki~r~~L~~~~~~~~~ 535 (540)
T PRK06164 517 NGAKIQKHRLREMAQARLA 535 (540)
T ss_pred ccccccHHHHHHHHHHhhh
Confidence 9999999999887654
No 79
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.2e-64 Score=571.23 Aligned_cols=506 Identities=27% Similarity=0.385 Sum_probs=425.0
Q ss_pred CCCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEE
Q 004977 81 ASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAI 160 (721)
Q Consensus 81 ~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i 160 (721)
..|+.++|+++++.+|+++|+.+ ++. .+||+||+++++++|+.|.+.|+++|++|++
T Consensus 5 ~~~l~~~l~~~~~~~p~~~a~~~------------~~~-----------~~Ty~~l~~~~~~~a~~L~~~g~~~~~~V~l 61 (521)
T PRK06187 5 PLTIGRILRHGARKHPDKEAVYF------------DGR-----------RTTYAELDERVNRLANALRALGVKKGDRVAV 61 (521)
T ss_pred cCCHHHHHHHHHHHCCCceEEEe------------CCc-----------eEcHHHHHHHHHHHHHHHHHcCCCCCCEEEE
Confidence 47999999999999999999986 232 4999999999999999999999999999999
Q ss_pred EccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccchhHHHhhhhcCCCccEEEEecCCCCCcc
Q 004977 161 LAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEKD 240 (721)
Q Consensus 161 ~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~ 240 (721)
+++|+++++++++||+++|++++|+++.++.+++.++++.+++++++++.+..+.+..+...++.++.++..++....
T Consensus 62 ~~~~~~~~~~~~la~~~~G~~~v~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 139 (521)
T PRK06187 62 FDWNSHEYLEAYFAVPKIGAVLHPINIRLKPEEIAYILNDAEDRVVLVDSEFVPLLAAILPQLPTVRTVIVEGDGPAA-- 139 (521)
T ss_pred ECCCCHHHHHHHHHHHHcCeEEEecccCCCHHHHHHHHHhcCCeEEEEcchHHHHHHHHhhccCCccEEEEecCcccc--
Confidence 999999999999999999999999999999999999999999999999999888888887778878777776654321
Q ss_pred CCccCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHHHHHHHhhCCCCCCCcEE
Q 004977 241 SGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNPGRSDVY 320 (721)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~d~~ 320 (721)
.......++.++....... .......++++++++|||||||.||+|.+||+++.+........+ ++.++|++
T Consensus 140 ------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~-~~~~~d~~ 211 (521)
T PRK06187 140 ------PLAPEVGEYEELLAAASDT-FDFPDIDENDAAAMLYTSGTTGHPKGVVLSHRNLFLHSLAVCAWL-KLSRDDVY 211 (521)
T ss_pred ------ccccccccHHHHhhcCCcc-CCCCCCCccceEEEEECCCCCCCCceEEeehHHHHHHHHHHHHhh-CCCCCCEE
Confidence 0112345566665433222 122345678999999999999999999999999999888888877 89999999
Q ss_pred EeccChHHHHHHHHHHHHHHhcceEeeCccccccccchhhccCccCcceeecceEEeechHHHHHHHHHHHHHHHhhcch
Q 004977 321 LAYLPLAHVLELAAESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKGGL 400 (721)
Q Consensus 321 l~~~pl~h~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~ 400 (721)
++.+|++|.+++...+.++..|+++++.+.. + ...++..++++++|.++++|++++.+.+.....
T Consensus 212 ~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~~---~-----~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~------- 276 (521)
T PRK06187 212 LVIVPMFHVHAWGLPYLALMAGAKQVIPRRF---D-----PENLLDLIETERVTFFFAVPTIWQMLLKAPRAY------- 276 (521)
T ss_pred EEeCCchHHhhHHHHHHHHHhCCEEEecCCC---C-----HHHHHHHHHHhCCeEEEchHHHHHHHHcCcCCC-------
Confidence 9999999999988877799999999985543 1 122344499999999999999999987632210
Q ss_pred hhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHHHHHHHhhCCccccccccc
Q 004977 401 TKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMGAPIGQAYGLT 480 (721)
Q Consensus 401 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~~~~~~g~~l~~~YG~T 480 (721)
....+++|.+++||++++.++.+.+.+.+++++++.||+|
T Consensus 277 ----------------------------------------~~~~~~l~~v~~~Ge~l~~~~~~~~~~~~~~~v~~~YG~t 316 (521)
T PRK06187 277 ----------------------------------------FVDFSSLRLVIYGGAALPPALLREFKEKFGIDLVQGYGMT 316 (521)
T ss_pred ----------------------------------------ccCcchhhEEEEcCcCCCHHHHHHHHHHhCcchheeeccC
Confidence 0112489999999999999999999988899999999999
Q ss_pred cccccccccCCCCC------CCCccCCCcCcceEEEEecCCCCcccCCCCCCcceEEEccccccccccCCCccccccccc
Q 004977 481 ETCAGSTFSEWDDP------SVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKV 554 (721)
Q Consensus 481 E~~~~~~~~~~~~~------~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~ 554 (721)
|++.++........ ..+++|+|+|+++++|+| +++..++ ...|+.|||+++|+.++.||+++++.+.+.|
T Consensus 317 E~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~-~~~~~~~-~~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~-- 392 (521)
T PRK06187 317 ETSPVVSVLPPEDQLPGQWTKRRSAGRPLPGVEARIVD-DDGDELP-PDGGEVGEIIVRGPWLMQGYWNRPEATAETI-- 392 (521)
T ss_pred ccCcccccCCcccccccccccCCccccccCCeEEEEEC-CCCCCCC-CCCCCeeEEEEECcchhhhhcCCHHHHHHHh--
Confidence 99877666544333 457999999999999999 5565444 2238899999999999999999999999988
Q ss_pred CCCCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcccceEEEEecCCC---ceEEEEEEcCh
Q 004977 555 DERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYVDNIMIHADPFH---NYCVALVVPSH 631 (721)
Q Consensus 555 ~~~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~~a~vv~~~ 631 (721)
.+ +||+|||+|+++++|.+++.||.+|+||+ +|++|+|.+||++|.++++|.+++|++.+++ +.+++++++.+
T Consensus 393 -~~--~~~~tGD~~~~~~~g~~~~~GR~~~~i~~-~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~ 468 (521)
T PRK06187 393 -DG--GWLHTGDVGYIDEDGYLYITDRIKDVIIS-GGENIYPRELEDALYGHPAVAEVAVIGVPDEKWGERPVAVVVLKP 468 (521)
T ss_pred -hC--CceeccceEEEcCCCCEEEeecccceEEc-CCeEECHHHHHHHHHhCCCceEEEEEeccCCCcCceEEEEEEECC
Confidence 66 79999999999999999999999999997 6999999999999999999999999998754 46888888765
Q ss_pred HHHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCCCCCCCCccCcccccChHHHHHH
Q 004977 632 KALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEPWTPEAGLVTAALKIKREQLKAK 711 (721)
Q Consensus 632 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~~~p~~~~~t~~gKi~R~~l~~~ 711 (721)
+. ..+ .++++++++ .+|++|++|..+++++++ | +|++||++|++|+++
T Consensus 469 ~~----------~~~---------------~~~l~~~l~-~~l~~~~~p~~i~~v~~~--P----~t~~gK~~r~~l~~~ 516 (521)
T PRK06187 469 GA----------TLD---------------AKELRAFLR-GRLAKFKLPKRIAFVDEL--P----RTSVGKILKRVLREQ 516 (521)
T ss_pred CC----------CCC---------------HHHHHHHHH-HhccCCCCceEEEEccCC--C----CCCCCCeeHHHHHHH
Confidence 32 000 156777777 889999999999999987 6 999999999999999
Q ss_pred HHH
Q 004977 712 FKD 714 (721)
Q Consensus 712 ~~~ 714 (721)
|++
T Consensus 517 ~~~ 519 (521)
T PRK06187 517 YAE 519 (521)
T ss_pred Hhc
Confidence 975
No 80
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=2.2e-66 Score=693.64 Aligned_cols=518 Identities=21% Similarity=0.256 Sum_probs=421.3
Q ss_pred cccccccccCCCCCCCCCCccccccCCCCccccccCCCCCCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCcccee
Q 004977 43 ARKKKVKQRGVPVEVGGEPGYAIRNAQIPELVEVPWKGASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEK 122 (721)
Q Consensus 43 p~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~ 122 (721)
|... ++++++.+..+...+..++..+ +.+...+++++|+++++++|+++|+.+. +.
T Consensus 1100 p~~~---~~~l~l~~~~~~~~l~~~~~~~-----~~~~~~~l~~~~~~~a~~~p~~~Al~~~------------~~---- 1155 (4334)
T PRK05691 1100 PQRA---LGDVQLLDAAERAQLAQWGQAP-----CAPAQAWLPELLNEQARQTPERIALVWD------------GG---- 1155 (4334)
T ss_pred cccc---hhhhcCCCHHHHHHHHhccCCC-----CCCccCCHHHHHHHHHHhCCCCeEEEEC------------Cc----
Confidence 6676 8889998888877765554411 1133478999999999999999999862 32
Q ss_pred ccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcC
Q 004977 123 LHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQ 202 (721)
Q Consensus 123 ~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~ 202 (721)
.+||+||.++++++|++|++.|+++|++|+|+++|++++++++|||+++|+++||++|.++.+++.+++++++
T Consensus 1156 -------~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~~s~~~iv~~lailkaG~~~vpld~~~p~~rl~~il~~~~ 1228 (4334)
T PRK05691 1156 -------SLDYAELHAQANRLAHYLRDKGVGPDVCVAIAAERSPQLLVGLLAILKAGGAYVPLDPDYPAERLAYMLADSG 1228 (4334)
T ss_pred -------eEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEEecCcCChHHHHHHHHHhcC
Confidence 5999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEECccchhHHHhhhhcCCCccEEEEecCCCCCccCCccCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEe
Q 004977 203 VTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEKDSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMY 282 (721)
Q Consensus 203 ~~~vi~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~ 282 (721)
++++|++......+.. ..... .+.++... ........+.....++++|+++|
T Consensus 1229 ~~~vi~~~~~~~~~~~----~~~~~-~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~a~ii~ 1280 (4334)
T PRK05691 1229 VELLLTQSHLLERLPQ----AEGVS-AIALDSLH-----------------------LDSWPSQAPGLHLHGDNLAYVIY 1280 (4334)
T ss_pred CCEEEecchhhhhccc----ccCce-EEeecccc-----------------------ccccCCCCCCCCCCCCCeEEEEE
Confidence 9999999865443321 11111 11111100 00000111122346789999999
Q ss_pred ccCCCCCcchheeccHHHHHHHHHHHhhCCCCCCCcEEEeccChHHHHHHHHHHHHHHhcceEeeCccccccccchhhcc
Q 004977 283 TSGSTGLPKGVMITHGNIVATAAAIKTLIPNPGRSDVYLAYLPLAHVLELAAESIMLCAGCAIGYGSTLTMTDTSSKIKK 362 (721)
Q Consensus 283 TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~ 362 (721)
||||||.||||+++|+++.+.+.+....+ .++++|++++..|++|+.++..++.+|+.|+++++.++....+. .
T Consensus 1281 TSGSTG~PKgV~~~h~~l~~~~~~~~~~~-~~~~~d~~l~~~~~~fd~s~~~~~~~L~~G~~l~i~~~~~~~~~-----~ 1354 (4334)
T PRK05691 1281 TSGSTGQPKGVGNTHAALAERLQWMQATY-ALDDSDVLMQKAPISFDVSVWECFWPLITGCRLVLAGPGEHRDP-----Q 1354 (4334)
T ss_pred cCCCCCCCceeEeecHHHHHHHHHHHHhc-CCCCCCEEEEeCCccHHHHHHHHHHHHhCCCEEEEcCccccCCH-----H
Confidence 99999999999999999999999988888 89999999999999999999989999999999999654333222 2
Q ss_pred CccCcceeecceEEeechHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHH
Q 004977 363 GTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAV 442 (721)
Q Consensus 363 ~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (721)
.+...++++++|++.++|++++.+.+.... .
T Consensus 1355 ~l~~~i~~~~vt~~~~~Ps~l~~l~~~~~~-------------------------------------------------~ 1385 (4334)
T PRK05691 1355 RIAELVQQYGVTTLHFVPPLLQLFIDEPLA-------------------------------------------------A 1385 (4334)
T ss_pred HHHHHHHHcCCeEEECcHHHHHHHHhCccc-------------------------------------------------c
Confidence 233449999999999999999988642100 0
Q ss_pred hCCcEEEEEecCCCCCHHHHHHHHHhh-CCccccccccccccccccccCC--CCCCCCccCCCcCcceEEEEecCCCCcc
Q 004977 443 LGGRIRFMICGGAPLSADSQRFINICM-GAPIGQAYGLTETCAGSTFSEW--DDPSVGRVGPPVPCCYIKLVSWDEGGYK 519 (721)
Q Consensus 443 ~~~~lr~v~~gG~~l~~~~~~~~~~~~-g~~l~~~YG~TE~~~~~~~~~~--~~~~~~~vG~p~p~~~v~i~d~~~~~~~ 519 (721)
..++||.+++||+++++++.+.+...+ +++++|.||+||++..++.... ......++|+|++|++++|+| ++++.
T Consensus 1386 ~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d-~~~~~- 1463 (4334)
T PRK05691 1386 ACTSLRRLFSGGEALPAELRNRVLQRLPQVQLHNRYGPTETAINVTHWQCQAEDGERSPIGRPLGNVLCRVLD-AELNL- 1463 (4334)
T ss_pred cCCcccEEEEeecCCCHHHHHHHHHhCCCcEEEeCCCcChheeeeeeeecccccCCCCcccceeCCCEEEEEC-CCCCC-
Confidence 114899999999999999998887765 6899999999999877664322 233457899999999999999 56655
Q ss_pred cCCCCCCcceEEEccccccccccCCCcccccccccCC---CCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeec
Q 004977 520 TSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVDE---RGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISL 596 (721)
Q Consensus 520 ~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~~---~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p 596 (721)
++.|..|||+|+|+++++||+|+|+.|+++|..++ ++.+||+|||+|++++||.|+|+||+|++||+ +|++|+|
T Consensus 1464 --vp~G~~GEL~i~G~~v~~GYl~~p~~t~~~f~~~p~~~~~~r~yrTGDl~~~~~dG~l~~~GR~d~qiki-~G~rie~ 1540 (4334)
T PRK05691 1464 --LPPGVAGELCIGGAGLARGYLGRPALTAERFVPDPLGEDGARLYRTGDRARWNADGALEYLGRLDQQVKL-RGFRVEP 1540 (4334)
T ss_pred --CCCCCceEEEecCcccchhhcCCccccHhhCCCCCCCCCCceEEEccceEEECCCCCEEEecccCcEEEE-CCEEcCH
Confidence 45899999999999999999999999999997432 34579999999999999999999999999998 5999999
Q ss_pred hHHHHHHhcCcccceEEEEecCCC--ceEEEEEEcChHHHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCC
Q 004977 597 GKVEAALISSDYVDNIMIHADPFH--NYCVALVVPSHKALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKL 674 (721)
Q Consensus 597 ~eIE~~l~~~p~V~~~~V~g~~~~--~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L 674 (721)
.|||++|.+||+|.+|+|++..+. ..++|++++..+.. . ..++|+++++ .+|
T Consensus 1541 ~eIE~~l~~~~~V~~a~v~~~~~~~~~~lva~~~~~~~~~----------~---------------~~~~l~~~l~-~~L 1594 (4334)
T PRK05691 1541 EEIQARLLAQPGVAQAAVLVREGAAGAQLVGYYTGEAGQE----------A---------------EAERLKAALA-AEL 1594 (4334)
T ss_pred HHHHHHHHhCCCcceEEEEEeeCCCCCEEEEEEEeCCCCC----------C---------------CHHHHHHHHH-HhC
Confidence 999999999999999999976533 56999998764320 0 0257888888 899
Q ss_pred CCcccccEEEeeCCCCCCCCCccCcccccChHHHHHH
Q 004977 675 DKFEIPAKIKLMPEPWTPEAGLVTAALKIKREQLKAK 711 (721)
Q Consensus 675 ~~~~~P~~i~~~~~~~~p~~~~~t~~gKi~R~~l~~~ 711 (721)
|.||+|+.++.++++ | +|++|||+|++|++.
T Consensus 1595 p~y~vP~~~~~~~~l--P----~t~~GKidr~~L~~~ 1625 (4334)
T PRK05691 1595 PEYMVPAQLIRLDQM--P----LGPSGKLDRRALPEP 1625 (4334)
T ss_pred ccccCCcEEEEcccc--C----CCCCCCcChhhcCcc
Confidence 999999999999988 6 999999999999653
No 81
>PRK06145 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.3e-64 Score=567.17 Aligned_cols=489 Identities=22% Similarity=0.293 Sum_probs=394.6
Q ss_pred CCCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEE
Q 004977 81 ASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAI 160 (721)
Q Consensus 81 ~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i 160 (721)
+.++.++|+++++++|+++|+++ +++ .+||.||.++++++|.+|.+.|+++|++|++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~a~~~------------~~~-----------~~ty~el~~~v~~~a~~L~~~g~~~~~~v~i 57 (497)
T PRK06145 1 MFNLSASIAFHARRTPDRAALVY------------RDQ-----------EISYAEFHQRILQAAGMLHARGIGQGDVVAL 57 (497)
T ss_pred CccHHHHHHHHHHHCCCceEEEE------------CCc-----------ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEE
Confidence 46889999999999999999976 443 6999999999999999999999999999999
Q ss_pred EccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccchhHHHhhhhcCCCccEEEEecCCCCCcc
Q 004977 161 LAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEKD 240 (721)
Q Consensus 161 ~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~ 240 (721)
+++|+++++++++||+++|++++|+++.++.+++.++++.+++++++++.+....... ....+.++....
T Consensus 58 ~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~-------~~~~~~~~~~~~--- 127 (497)
T PRK06145 58 LMKNSAAFLELAFAASYLGAVFLPINYRLAADEVAYILGDAGAKLLLVDEEFDAIVAL-------ETPKIVIDAAAQ--- 127 (497)
T ss_pred ECCCCHHHHHHHHHHHhcCcEEEecccccCHHHHHHHHHhcCCcEEEEccchhhhhhc-------ccceEEecCccc---
Confidence 9999999999999999999999999999999999999999999999998765433210 011222221100
Q ss_pred CCccCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHHHHHHHhhCCCCCCCcEE
Q 004977 241 SGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNPGRSDVY 320 (721)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~d~~ 320 (721)
..+..+.. ............++++++++|||||||.||+|++||+++...+......+ ++..+|++
T Consensus 128 ------------~~~~~~~~-~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~-~~~~~~~~ 193 (497)
T PRK06145 128 ------------ADSRRLAQ-GGLEIPPQAAVAPTDLVRLMYTSGTTDRPKGVMHSYGNLHWKSIDHVIAL-GLTASERL 193 (497)
T ss_pred ------------chhHHHhc-cCCCCCCCCCCCccceEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhh-CCCCCcEE
Confidence 00111111 11111112345678999999999999999999999999987776666666 88999999
Q ss_pred EeccChHHHHHHHH-HHHHHHhcceEeeCccccccccchhhccCccCcceeecceEEeechHHHHHHHHHHHHHHHhhcc
Q 004977 321 LAYLPLAHVLELAA-ESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKGG 399 (721)
Q Consensus 321 l~~~pl~h~~g~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~ 399 (721)
+..+|++|.+++.. .+.++..|+++++.+... ...++..++++++|++.++|+++..++......
T Consensus 194 ~~~~p~~~~~~~~~~~~~~l~~g~~~~~~~~~~--------~~~~~~~i~~~~~t~~~~~P~~~~~ll~~~~~~------ 259 (497)
T PRK06145 194 LVVGPLYHVGAFDLPGIAVLWVGGTLRIHREFD--------PEAVLAAIERHRLTCAWMAPVMLSRVLTVPDRD------ 259 (497)
T ss_pred EEecCchhHhHHHHHHHHHHhccCEEEECCcCC--------HHHHHHHHHHhCCeEEEehHHHHHHHHcCCCcc------
Confidence 99999999988865 466789999988743211 112233389999999999999999886521100
Q ss_pred hhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHHHHHHHhh-CCccccccc
Q 004977 400 LTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICM-GAPIGQAYG 478 (721)
Q Consensus 400 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~~~~~~-g~~l~~~YG 478 (721)
....+++|.+++||+++++++.+.+.+.+ +.++++.||
T Consensus 260 -----------------------------------------~~~~~~l~~~~~gG~~~~~~~~~~~~~~~~~~~v~~~YG 298 (497)
T PRK06145 260 -----------------------------------------RFDLDSLAWCIGGGEKTPESRIRDFTRVFTRARYIDAYG 298 (497)
T ss_pred -----------------------------------------ccccccceEEEecCCCCCHHHHHHHHHHcCCCceEEeec
Confidence 00114799999999999999998888877 678999999
Q ss_pred cccccccccccCCC--CCCCCccCCCcCcceEEEEecCCCCcccCCCCCCcceEEEccccccccccCCCcccccccccCC
Q 004977 479 LTETCAGSTFSEWD--DPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVDE 556 (721)
Q Consensus 479 ~TE~~~~~~~~~~~--~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~~ 556 (721)
+||++..++..... ....+++|+|+++++++|+| +++..+ ++|+.|||+++|++++.||+++++.|++.| .
T Consensus 299 ~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~-~~~~~~---~~~~~Gel~v~g~~~~~Gy~~~~~~~~~~~---~ 371 (497)
T PRK06145 299 LTETCSGDTLMEAGREIEKIGSTGRALAHVEIRIAD-GAGRWL---PPNMKGEICMRGPKVTKGYWKDPEKTAEAF---Y 371 (497)
T ss_pred CcccCCcceeccCccccccCCCcccCCCCceEEEEC-CCCCCC---CCCCceEEEEECcchhhhhcCChHHHHHHH---h
Confidence 99998765543322 22457899999999999999 555543 478899999999999999999999999998 5
Q ss_pred CCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcccceEEEEecCCC---ceEEEEEEcChHH
Q 004977 557 RGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYVDNIMIHADPFH---NYCVALVVPSHKA 633 (721)
Q Consensus 557 ~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~~a~vv~~~~~ 633 (721)
+ +||+|||+|++|+||+++++||+||+||+ +|++|+|.+||++|.++|+|.+++|++.++. +.+++++++.+..
T Consensus 372 ~--~~~~TGDl~~~~~~g~l~~~GR~~~~i~~-~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~ 448 (497)
T PRK06145 372 G--DWFRSGDVGYLDEEGFLYLTDRKKDMIIS-GGENIASSEVERVIYELPEVAEAAVIGVHDDRWGERITAVVVLNPGA 448 (497)
T ss_pred C--CCeeccceEEEcCCCcEEEeccccceEEe-CCeEECHHHHHHHHHhCCCeeEEEEEecCCCccCceEEEEEEECCCC
Confidence 6 89999999999999999999999999997 6999999999999999999999999998765 3688888876421
Q ss_pred HHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCCCCCCCCccCcccccChHHHHHHHH
Q 004977 634 LEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEPWTPEAGLVTAALKIKREQLKAKFK 713 (721)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~~~p~~~~~t~~gKi~R~~l~~~~~ 713 (721)
..+ .++|+++++ .+|++|++|..+++++++ | +|++||++|++|++++.
T Consensus 449 ----------~~~---------------~~~l~~~~~-~~l~~~~~p~~i~~v~~i--P----~t~~GKi~r~~l~~~~~ 496 (497)
T PRK06145 449 ----------TLT---------------LEALDRHCR-QRLASFKVPRQLKVRDEL--P----RNPSGKVLKRVLRDELN 496 (497)
T ss_pred ----------CCC---------------HHHHHHHHH-HhhhcCCCCCEEEEeccC--C----CCCcccccHHHHHHHhc
Confidence 000 257888888 889999999999999988 6 99999999999998764
No 82
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.4e-65 Score=583.03 Aligned_cols=506 Identities=22% Similarity=0.268 Sum_probs=389.0
Q ss_pred CCCCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEE
Q 004977 80 GASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAA 159 (721)
Q Consensus 80 ~~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~ 159 (721)
...|+.++|.++++++|+++|+++ +++ .+||+||.++++++|++|.+.|+++||+|+
T Consensus 35 ~~~tl~~~l~~~a~~~p~~~Ai~~------------~~~-----------~~Ty~eL~~~~~~la~~L~~~g~~~gd~V~ 91 (600)
T PRK08279 35 SKRSLGDVFEEAAARHPDRPALLF------------EDQ-----------SISYAELNARANRYAHWAAARGVGKGDVVA 91 (600)
T ss_pred CcccHHHHHHHHHHhCCCCcEEEe------------CCC-----------cccHHHHHHHHHHHHHHHHhcCCCCCCEEE
Confidence 357999999999999999999986 333 699999999999999999999999999999
Q ss_pred EEccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccchhHHHhhhhcCCCccEEEEecCCCCCc
Q 004977 160 ILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEK 239 (721)
Q Consensus 160 i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~ 239 (721)
|+++|+++++++++||+++|++++|+++.++.+++.+++++++++++|++.+..+.+............++..++....
T Consensus 92 i~~~n~~~~v~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 170 (600)
T PRK08279 92 LLMENRPEYLAAWLGLAKLGAVVALLNTQQRGAVLAHSLNLVDAKHLIVGEELVEAFEEARADLARPPRLWVAGGDTLD- 170 (600)
T ss_pred EECCCCHHHHHHHHHHHhcCcEEeecCCCCCHHHHHHHHHhcCCCEEEEChHHHHHHHHHhhhhcccceEEEecCcccc-
Confidence 9999999999999999999999999999999999999999999999999998877776655544443333333221100
Q ss_pred cCCccCCCCCceEeeHHHHHhcCCCCC----CCCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHHHHHHHhhCCCCC
Q 004977 240 DSGVSGGISNWTVSSFSEVEKLGKRSP----VDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNPG 315 (721)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~ 315 (721)
....+.++.......+ .......++++++|+|||||||.||||++||+++.+.+.+....+ .+.
T Consensus 171 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~-~l~ 238 (600)
T PRK08279 171 -----------DPEGYEDLAAAAAGAPTTNPASRSGVTAKDTAFYIYTSGTTGLPKAAVMSHMRWLKAMGGFGGLL-RLT 238 (600)
T ss_pred -----------ccccHHHHhhhcccCCccCCCcccCCCccccEEEEEcCCCCCCCcEEEEeHHHHHHHHHHHHHhc-CCC
Confidence 0122333332221111 111334678999999999999999999999999999999888887 899
Q ss_pred CCcEEEeccChHHHHHHHHH-HHHHHhcceEeeCccccccccchhhccCccCcceeecceEEeechHHHHHHHHHHHHHH
Q 004977 316 RSDVYLAYLPLAHVLELAAE-SIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKV 394 (721)
Q Consensus 316 ~~d~~l~~~pl~h~~g~~~~-~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~ 394 (721)
++|++++.+|++|.+++... +.++..|+++++.+... ...++..++++++|++.++|++++.+........
T Consensus 239 ~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~v~~~~~~--------~~~~~~~i~~~~~t~~~~~p~l~~~l~~~~~~~~ 310 (600)
T PRK08279 239 PDDVLYCCLPLYHNTGGTVAWSSVLAAGATLALRRKFS--------ASRFWDDVRRYRATAFQYIGELCRYLLNQPPKPT 310 (600)
T ss_pred CCcEEEEecCchhhhhHHHHHHHHHhcCcEEEEcCCCC--------HHHHHHHHHHhcceEEeehHHHHHHHHhCCCCcc
Confidence 99999999999999998764 45678888888743211 1112233899999999999999988765211000
Q ss_pred HhhcchhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHHHHHHHhhCC-cc
Q 004977 395 EEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMGA-PI 473 (721)
Q Consensus 395 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~~~~~~g~-~l 473 (721)
....++|.+ +|+.+++++.+.+...++. .+
T Consensus 311 -----------------------------------------------~~~~~l~~~--~g~~l~~~~~~~~~~~~~~~~l 341 (600)
T PRK08279 311 -----------------------------------------------DRDHRLRLM--IGNGLRPDIWDEFQQRFGIPRI 341 (600)
T ss_pred -----------------------------------------------ccCcceeEE--ecCCCCHHHHHHHHHHhCccee
Confidence 001367754 4778999999999888876 59
Q ss_pred ccccccccccccccccCCCCCCCCccCCCcC----cceEEEEecCCCC-------cccCCCCCCcceEE--Ecccccccc
Q 004977 474 GQAYGLTETCAGSTFSEWDDPSVGRVGPPVP----CCYIKLVSWDEGG-------YKTSDKPMPRGEIV--VGGFNVTAG 540 (721)
Q Consensus 474 ~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~p----~~~v~i~d~~~~~-------~~~~~~~g~~GEl~--v~g~~v~~g 540 (721)
+|.||+||++..++.. ....+++|++.+ +..+...+.+.+. ....+++|+.|||+ |+|++++.|
T Consensus 342 ~~~YG~tE~~~~~~~~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~Gel~~~i~~~~~~~G 418 (600)
T PRK08279 342 LEFYAASEGNVGFINV---FNFDGTVGRVPLWLAHPYAIVKYDVDTGEPVRDADGRCIKVKPGEVGLLIGRITDRGPFDG 418 (600)
T ss_pred eeeecccccceeeccc---CCCCcccccccccccccceeeeeccCcCceeeCCCCccccCCCCCceeEEEEecCcccccc
Confidence 9999999988643321 234467787666 3333222211111 11225678999998 789999999
Q ss_pred ccCCCcccccccccC--CCCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcccceEEEEecC
Q 004977 541 YFNNPGKTSEVYKVD--ERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYVDNIMIHADP 618 (721)
Q Consensus 541 Y~~~~~~t~~~f~~~--~~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~ 618 (721)
| ++++.|.+.|..+ .++.+||+|||+|++|+||+|+|.||.||+||+ +|++|+|.|||++|.+||+|.+|+|++.+
T Consensus 419 Y-~~~~~t~~~~~~~~~~~~~~~~~TGDlg~~~~dG~l~~~GR~~d~ik~-~G~~i~p~eIE~~l~~~p~V~~a~v~gv~ 496 (600)
T PRK08279 419 Y-TDPEASEKKILRDVFKKGDAWFNTGDLMRDDGFGHAQFVDRLGDTFRW-KGENVATTEVENALSGFPGVEEAVVYGVE 496 (600)
T ss_pred c-CCchhhHHHHhhcccCCCCceEeecceEEEcCCccEEEecccCCeEEE-CCcccCHHHHHHHHhcCCCcceEEEEEee
Confidence 9 9999998887421 234489999999999999999999999999997 69999999999999999999999999876
Q ss_pred CC----ceEEEEEEcChHHHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCCCCCCC
Q 004977 619 FH----NYCVALVVPSHKALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEPWTPEA 694 (721)
Q Consensus 619 ~~----~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~~~p~~ 694 (721)
++ ...+++++..++. ..+ .++++++++ .+|+.|++|+.|++++++ |
T Consensus 497 ~~~~~~~~~~~~vv~~~~~--------~~~-----------------~~~l~~~l~-~~L~~~~~P~~i~~v~~l--P-- 546 (600)
T PRK08279 497 VPGTDGRAGMAAIVLADGA--------EFD-----------------LAALAAHLY-ERLPAYAVPLFVRLVPEL--E-- 546 (600)
T ss_pred cCCCCCccceeEEEecCCc--------cCC-----------------HHHHHHHHH-hhCccccCCeEEEeecCC--C--
Confidence 43 2345555544221 000 267888898 899999999999999997 6
Q ss_pred CccCcccccChHHHHHHHHHH
Q 004977 695 GLVTAALKIKREQLKAKFKDD 715 (721)
Q Consensus 695 ~~~t~~gKi~R~~l~~~~~~~ 715 (721)
+|++||++|++|++++.+.
T Consensus 547 --~t~~GKi~r~~L~~~~~~~ 565 (600)
T PRK08279 547 --TTGTFKYRKVDLRKEGFDP 565 (600)
T ss_pred --CCcchhhhHHHHhhcCCCc
Confidence 9999999999999876544
No 83
>PRK07867 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.3e-64 Score=567.27 Aligned_cols=483 Identities=20% Similarity=0.278 Sum_probs=385.0
Q ss_pred CCCCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhC-CCCCCCEE
Q 004977 80 GASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNF-GHNVDTRA 158 (721)
Q Consensus 80 ~~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~-Gv~~gd~V 158 (721)
...|+.++|.+.+. ++++|+++ +++ ++||+||.++++++|++|.++ |++++++|
T Consensus 3 ~~~~~~~~l~~~a~--~~~~a~~~------------~~~-----------~~Ty~el~~~v~~lA~~L~~~~~~~~~~~V 57 (529)
T PRK07867 3 SAPTVAELLLPLAE--DDDRGLYF------------EDS-----------FTSWREHIRGSAARAAALRARLDPTRPPHV 57 (529)
T ss_pred ccccHHHHHHHhcc--cCCceEEE------------CCc-----------EEeHHHHHHHHHHHHHHHHHhhCCCCCCEE
Confidence 45689999988875 78999876 444 799999999999999999997 89999999
Q ss_pred EEEccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccchhHHHhhhhcCCCccEEEEecCCCCC
Q 004977 159 AILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSE 238 (721)
Q Consensus 159 ~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~ 238 (721)
+++++|+++|+++++||+++|++++|+++.++.+++.+++++++++++|++++....+..+. +.+. ++..+.
T Consensus 58 ~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~---~~~~-~~~~~~---- 129 (529)
T PRK07867 58 GVLLDNTPEFSLLLGAAALSGIVPVGLNPTRRGAALARDIAHADCQLVLTESAHAELLDGLD---PGVR-VINVDS---- 129 (529)
T ss_pred EEECCCCHHHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHhCCCeEEEECHhHHHHHHhhc---cCce-EEEecc----
Confidence 99999999999999999999999999999999999999999999999999988766554432 2222 221111
Q ss_pred ccCCccCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHHHHHHHhhCCCCCCCc
Q 004977 239 KDSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNPGRSD 318 (721)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~d 318 (721)
..+.++...............++++++|+|||||||.||||++||+++..........+ ++.++|
T Consensus 130 --------------~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~-~~~~~d 194 (529)
T PRK07867 130 --------------PAWADELAAHRDAEPPFRVADPDDLFMLIFTSGTSGDPKAVRCTHRKVASAGVMLAQRF-GLGPDD 194 (529)
T ss_pred --------------ccHHHHhcccCCCCCCcccCCccceEEEEECCCCCCCCcEEEecHHHHHHHHHHHHHhh-CCCccc
Confidence 11333332211111122345678999999999999999999999999998888888877 889999
Q ss_pred EEEeccChHHHHHHHH-HHHHHHhcceEeeC---ccccccccchhhccCccCcceeecceEEeechHHHHHHHHHHHHHH
Q 004977 319 VYLAYLPLAHVLELAA-ESIMLCAGCAIGYG---STLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKV 394 (721)
Q Consensus 319 ~~l~~~pl~h~~g~~~-~~~~l~~G~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~ 394 (721)
++++.+|++|.+++.. .+.++..|+++++. ++..+.+. ++++++|++.++|+.+..++......
T Consensus 195 ~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~-----------i~~~~vt~~~~~p~~~~~ll~~~~~~- 262 (529)
T PRK07867 195 VCYVSMPLFHSNAVMAGWAVALAAGASIALRRKFSASGFLPD-----------VRRYGATYANYVGKPLSYVLATPERP- 262 (529)
T ss_pred EEEEecchhHHHHHHHHHHHHHhcCceEEecCCCCHHHHHHH-----------HHHhCCeEEeccHHHHHHHHhCCCcc-
Confidence 9999999999999866 55678899999883 33333333 89999999999999998776421000
Q ss_pred HhhcchhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHHHHHHHhhCCccc
Q 004977 395 EEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMGAPIG 474 (721)
Q Consensus 395 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~~~~~~g~~l~ 474 (721)
....+++|. ++||+.+++.. ..+.+.+|++++
T Consensus 263 ----------------------------------------------~~~~~~lr~-~~gg~~~~~~~-~~~~~~~g~~l~ 294 (529)
T PRK07867 263 ----------------------------------------------DDADNPLRI-VYGNEGAPGDI-ARFARRFGCVVV 294 (529)
T ss_pred ----------------------------------------------cccccceEE-EecCCCChHHH-HHHHHHhCCcEE
Confidence 000136774 56888888776 455566799999
Q ss_pred cccccccccccccccCCCCCCCCccCCCcCcceEEEEecCCCCcccCCCCCC------------cceEEE-ccccccccc
Q 004977 475 QAYGLTETCAGSTFSEWDDPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMP------------RGEIVV-GGFNVTAGY 541 (721)
Q Consensus 475 ~~YG~TE~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~------------~GEl~v-~g~~v~~gY 541 (721)
+.||+||++..++... ....+++|.|+++ ++++|++++..+ ++|+ .|||++ +|++++.||
T Consensus 295 ~~YG~TE~~~~~~~~~--~~~~~~~g~~~~~--~~i~~~~~~~~~---~~g~~~~~~~~~~~~~~Gel~i~~g~~~~~gy 367 (529)
T PRK07867 295 DGFGSTEGGVAITRTP--DTPPGALGPLPPG--VAIVDPDTGTEC---PPAEDADGRLLNADEAIGELVNTAGPGGFEGY 367 (529)
T ss_pred EeecccccccccccCC--CCCCCCcCCCCCC--EEEEECCCCCCC---CCCccccccccccCCcceEEEEecCCcccccc
Confidence 9999999986554322 2345789999998 778886555543 3556 899999 999999999
Q ss_pred cCCCcccccccccCCCCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcccceEEEEecCCCc
Q 004977 542 FNNPGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYVDNIMIHADPFHN 621 (721)
Q Consensus 542 ~~~~~~t~~~f~~~~~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~~ 621 (721)
+++++.|.+.| .+ |||+|||+|+++++|+++|+||.||+||+ +|++|+|.|||++|.+||+|.+|+|++.+++.
T Consensus 368 ~~~~~~~~~~~---~~--g~~~TGD~~~~~~~g~l~~~GR~~d~i~~-~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~~ 441 (529)
T PRK07867 368 YNDPEADAERM---RG--GVYWSGDLAYRDADGYAYFAGRLGDWMRV-DGENLGTAPIERILLRYPDATEVAVYAVPDPV 441 (529)
T ss_pred cCChHhhhhhh---cC--CeEeeccEEEEeCCCcEEEeccccCeEEE-CCEEeCHHHHHHHHHhCCCeeEEEEEeccCCC
Confidence 99999999988 66 89999999999999999999999999997 69999999999999999999999999998753
Q ss_pred ---eEEEEEEcChHHHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHH-CCCCCcccccEEEeeCCCCCCCCCcc
Q 004977 622 ---YCVALVVPSHKALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKA-AKLDKFEIPAKIKLMPEPWTPEAGLV 697 (721)
Q Consensus 622 ---~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~L~~~~~P~~i~~~~~~~~p~~~~~ 697 (721)
.++++|++.++.. .+ .+++++++++ ..|++|++|..|++++++ | +
T Consensus 442 ~g~~~~a~vv~~~~~~--------~~-----------------~~~l~~~~~~~~~l~~~~~P~~i~~~~~i--P----~ 490 (529)
T PRK07867 442 VGDQVMAALVLAPGAK--------FD-----------------PDAFAEFLAAQPDLGPKQWPSYVRVCAEL--P----R 490 (529)
T ss_pred CCeeEEEEEEECCCCC--------CC-----------------HHHHHHHHHhhccCCcccCCeEEEEeecc--C----C
Confidence 5888888765320 00 1456666652 259999999999999998 6 9
Q ss_pred CcccccChHHHHHHHHH
Q 004977 698 TAALKIKREQLKAKFKD 714 (721)
Q Consensus 698 t~~gKi~R~~l~~~~~~ 714 (721)
|++||++|++|+++..+
T Consensus 491 t~~GKv~r~~L~~~~~~ 507 (529)
T PRK07867 491 TATFKVLKRQLSAEGVD 507 (529)
T ss_pred CCCcceeHHHHHHhcCC
Confidence 99999999999987644
No 84
>PRK06188 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.9e-64 Score=567.69 Aligned_cols=498 Identities=22% Similarity=0.253 Sum_probs=404.7
Q ss_pred CCCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEE
Q 004977 81 ASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAI 160 (721)
Q Consensus 81 ~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i 160 (721)
..|+.++|.++++++|+++|+++ ++. .+||+||.++++++|+.|.+.|+++|++|++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~a~~~------------~~~-----------~~Ty~~l~~~~~~~a~~L~~~gv~~~~~V~i 67 (524)
T PRK06188 11 GATYGHLLVSALKRYPDRPALVL------------GDT-----------RLTYGQLADRISRYIQAFEALGLGTGDAVAL 67 (524)
T ss_pred CccHHHHHHHHHHHCCCCeEEEE------------CCC-----------cccHHHHHHHHHHHHHHHHHcCCCCCCEEEE
Confidence 46899999999999999999986 333 6999999999999999999999999999999
Q ss_pred EccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECcc-chhHHHhhhhcCCCccEEEEecCCCCCc
Q 004977 161 LAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSK-QLKKLSAVSSSLKTIKNVIYFENDGSEK 239 (721)
Q Consensus 161 ~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~-~~~~~~~~~~~~~~~~~ii~~~~~~~~~ 239 (721)
+++|+++++++++||+++|++++|+++.++.+++.++++.++++.+++++. ....+.......+.+.+++.++.....
T Consensus 68 ~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 146 (524)
T PRK06188 68 LSLNRPEVLMAIGAAQLAGLRRTALHPLGSLDDHAYVLEDAGISTLIVDPAPFVERALALLARVPSLKHVLTLGPVPDG- 146 (524)
T ss_pred ECCCCHHHHHHHHHHHHhCCEEEecccCCCHHHHHHHHHhcCceEEEEecchhhHHHHHHhhhcCCceEEEEeCCccch-
Confidence 999999999999999999999999999999999999999999999999886 444444444445555555554432110
Q ss_pred cCCccCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHHHHHHHhhCCCCCCCcE
Q 004977 240 DSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNPGRSDV 319 (721)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~d~ 319 (721)
....+......... ......++++++|+|||||||.||+|++||+++...+......+ .+..+|+
T Consensus 147 -------------~~~~~~~~~~~~~~-~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~-~~~~~~~ 211 (524)
T PRK06188 147 -------------VDLLAAAAKFGPAP-LVAAALPPDIAGLAYTGGTTGKPKGVMGTHRSIATMAQIQLAEW-EWPADPR 211 (524)
T ss_pred -------------hhHHHhhhccCccc-ccccCCCCCeEEEEeCCCCCCCCceeeeehHHHHHHHHHHHhhc-CCCcCcE
Confidence 01111111011111 11223456799999999999999999999999999988888887 8899999
Q ss_pred EEeccChHHHHHHHHHHHHHHhcceEeeCccccccccchhhccCccCcceeecceEEeechHHHHHHHHHHHHHHHhhcc
Q 004977 320 YLAYLPLAHVLELAAESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKGG 399 (721)
Q Consensus 320 ~l~~~pl~h~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~ 399 (721)
+++.+|++|.+++. .+.+++.|+++++.+... +..++..++++++|++.++|+++..+.+....
T Consensus 212 ~l~~~pl~~~~g~~-~~~~l~~G~~~~~~~~~~--------~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~------- 275 (524)
T PRK06188 212 FLMCTPLSHAGGAF-FLPTLLRGGTVIVLAKFD--------PAEVLRAIEEQRITATFLVPTMIYALLDHPDL------- 275 (524)
T ss_pred EEEecCchhhhhHH-HHHHHHcCCEEEEcCCCC--------HHHHHHHHHHhCCEEEEehHHHHHHHHhCcCc-------
Confidence 99999999998875 467788999999854321 12233339999999999999999988753110
Q ss_pred hhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHHHHHHHhhCCcccccccc
Q 004977 400 LTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMGAPIGQAYGL 479 (721)
Q Consensus 400 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~~~~~~g~~l~~~YG~ 479 (721)
.....+++|.+++||++++++..+.+.+.++..+++.||+
T Consensus 276 ----------------------------------------~~~~l~~lr~~~~gg~~~~~~~~~~~~~~~~~~~~~~YG~ 315 (524)
T PRK06188 276 ----------------------------------------RTRDLSSLETVYYGASPMSPVRLAEAIERFGPIFAQYYGQ 315 (524)
T ss_pred ----------------------------------------cCCCCcceeEEEEcCCCCCHHHHHHHHHHhCchhhheeCc
Confidence 0012258999999999999998877777789999999999
Q ss_pred ccccccccccCCCC------CCCCccCCCcCcceEEEEecCCCCcccCCCCCCcceEEEccccccccccCCCcccccccc
Q 004977 480 TETCAGSTFSEWDD------PSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYK 553 (721)
Q Consensus 480 TE~~~~~~~~~~~~------~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~ 553 (721)
||++..++...... ...+++|+|+|+++++|+| +++.. ++.|+.|||+++|+.++.||+++++.+.+.|
T Consensus 316 tE~~~~~~~~~~~~~~~~~~~~~~~~G~p~~g~~v~i~~-~~~~~---~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~- 390 (524)
T PRK06188 316 TEAPMVITYLRKRDHDPDDPKRLTSCGRPTPGLRVALLD-EDGRE---VAQGEVGEICVRGPLVMDGYWNRPEETAEAF- 390 (524)
T ss_pred cccCCceeecCchhccccccccCCccccccCCcEEEEEc-CCCCC---CCCCCeeEEEEECcchhhhhcCChHHhhhhh-
Confidence 99976655443221 2447899999999999999 55654 4578999999999999999999999999888
Q ss_pred cCCCCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcccceEEEEecCCC---ceEEEEEEcC
Q 004977 554 VDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYVDNIMIHADPFH---NYCVALVVPS 630 (721)
Q Consensus 554 ~~~~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~~a~vv~~ 630 (721)
.+ |||+|||+|++++||+++|.||.+|+||+ +|++|+|.+||++|.+||+|.+++|++.+++ +.+++++++.
T Consensus 391 --~~--g~~~TGDl~~~~~~g~~~~~GR~~~~i~~-~G~~i~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~ 465 (524)
T PRK06188 391 --RD--GWLHTGDVAREDEDGFYYIVDRKKDMIVT-GGFNVFPREVEDVLAEHPAVAQVAVIGVPDEKWGEAVTAVVVLR 465 (524)
T ss_pred --cC--CceeecceEEEcCCccEEEEeccccceec-CCEEECHHHHHHHHHhCCCeeEEEEEeccCCCcCceEEEEEEEC
Confidence 66 89999999999999999999999999997 6999999999999999999999999998765 3688888876
Q ss_pred hHHHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCCCCCCCCccCcccccChHHHHH
Q 004977 631 HKALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEPWTPEAGLVTAALKIKREQLKA 710 (721)
Q Consensus 631 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~~~p~~~~~t~~gKi~R~~l~~ 710 (721)
++.. .+ .++|+++++ .+++.|++|..|++++++ | +|++||++|++|++
T Consensus 466 ~~~~----------~~---------------~~~l~~~~~-~~l~~~~~p~~i~~v~~~--P----~t~~gKi~r~~L~~ 513 (524)
T PRK06188 466 PGAA----------VD---------------AAELQAHVK-ERKGSVHAPKQVDFVDSL--P----LTALGKPDKKALRA 513 (524)
T ss_pred CCCC----------CC---------------HHHHHHHHH-HhcccCCCCcEEEEecCC--C----CCccccccHHHHHH
Confidence 5320 00 257888888 899999999999999987 6 99999999999999
Q ss_pred HHHHH
Q 004977 711 KFKDD 715 (721)
Q Consensus 711 ~~~~~ 715 (721)
+|.+-
T Consensus 514 ~~~~~ 518 (524)
T PRK06188 514 RYWEG 518 (524)
T ss_pred HHHhh
Confidence 98653
No 85
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=100.00 E-value=4.3e-64 Score=568.04 Aligned_cols=510 Identities=20% Similarity=0.273 Sum_probs=402.4
Q ss_pred CCCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEE
Q 004977 81 ASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAI 160 (721)
Q Consensus 81 ~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i 160 (721)
+.|+.++|+++++++||+++++... +| .++++||+||.++++++|++|.+.|+++||+|++
T Consensus 9 ~~~~~~~~~~~a~~~~~~~~~~~~~----------~~---------~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~v~i 69 (542)
T PRK06018 9 PLLCHRIIDHAARIHGNREVVTRSV----------EG---------PIVRTTYAQIHDRALKVSQALDRDGIKLGDRVAT 69 (542)
T ss_pred CCCHHHHHHHHHHhCCCceEEEeec----------cC---------CceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEE
Confidence 3699999999999999999997421 22 2357999999999999999999999999999999
Q ss_pred EccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccchhHHHhhhhcCCCccEEEEecCCCCCcc
Q 004977 161 LAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEKD 240 (721)
Q Consensus 161 ~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~ 240 (721)
+++|+++++++++||+++|++++|+++.++.+++.++++.+++++++++.+..+.+.+.....+.++.++...+.....
T Consensus 70 ~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 148 (542)
T PRK06018 70 IAWNTWRHLEAWYGIMGIGAICHTVNPRLFPEQIAWIINHAEDRVVITDLTFVPILEKIADKLPSVERYVVLTDAAHMP- 148 (542)
T ss_pred EcCCchHHHHHHHHHHhcCeEeeccccccCHHHHHHHHhccCCCEEEEccccHHHHHHHHhhCCCccEEEEeccccccc-
Confidence 9999999999999999999999999999999999999999999999999988887777766667776666554321100
Q ss_pred CCccCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEeccCCCCCcchheeccHHHH-HHH-HHHHhhCCCCCCCc
Q 004977 241 SGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIV-ATA-AAIKTLIPNPGRSD 318 (721)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~-~~~-~~~~~~~~~~~~~d 318 (721)
. ........++++...... ........++++++|+|||||||.||||++||++.+ +.. ......+ ++..+|
T Consensus 149 ----~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~-~~~~~d 221 (542)
T PRK06018 149 ----Q-TTLKNAVAYEEWIAEADG-DFAWKTFDENTAAGMCYTSGTTGDPKGVLYSHRSNVLHALMANNGDAL-GTSAAD 221 (542)
T ss_pred ----c-cCccccccHHHHhccCCc-ccCcccCCccceeeEEecCCCCCCCcEEEEechhHHHHHHHHhhhhhc-CCCCCC
Confidence 0 000123355665543221 111233466889999999999999999999999743 322 2233445 788999
Q ss_pred EEEeccChHHHHHHHHHHHHHHhcceEeeCccccccccchhhccCccCcceeecceEEeechHHHHHHHHHHHHHHHhhc
Q 004977 319 VYLAYLPLAHVLELAAESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKG 398 (721)
Q Consensus 319 ~~l~~~pl~h~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~ 398 (721)
+++..+|++|.+++...+.++..|+++++.... .+. ..++..++++++|+++++|+++..+.+.....
T Consensus 222 ~~~~~~p~~h~~~~~~~~~~~~~g~~~v~~~~~--~~~-----~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~----- 289 (542)
T PRK06018 222 TMLPVVPLFHANSWGIAFSAPSMGTKLVMPGAK--LDG-----ASVYELLDTEKVTFTAGVPTVWLMLLQYMEKE----- 289 (542)
T ss_pred EEEEecCHHHHhhhHHHHhhhhcCceEEccCcC--CCH-----HHHHHHHHhcCCceeecCcHHHHHHHhccccc-----
Confidence 999999999999987777788999999874211 111 11233489999999999999999887532110
Q ss_pred chhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHHHHHHHhhCCccccccc
Q 004977 399 GLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMGAPIGQAYG 478 (721)
Q Consensus 399 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~~~~~~g~~l~~~YG 478 (721)
....+++|.+++||+++++++.+.+++ +++++++.||
T Consensus 290 ------------------------------------------~~~~~~lr~~~~~G~~l~~~~~~~~~~-~~~~~~~~YG 326 (542)
T PRK06018 290 ------------------------------------------GLKLPHLKMVVCGGSAMPRSMIKAFED-MGVEVRHAWG 326 (542)
T ss_pred ------------------------------------------CCCcccceEEEEcCCCCCHHHHHHHHH-hCCCeEeeec
Confidence 001148999999999999999999998 8999999999
Q ss_pred cccccccccccCCCC-----------CCCCccCCCcCcceEEEEecCCCCcccCCCCCCcceEEEccccccccccCCCcc
Q 004977 479 LTETCAGSTFSEWDD-----------PSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGK 547 (721)
Q Consensus 479 ~TE~~~~~~~~~~~~-----------~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~ 547 (721)
+||++.+.+...... ....++|+|.++++++|+| +++..++ .+.+..|||+++|++++.|||++
T Consensus 327 ~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~i~v~d-~~~~~~~-~~~~~~Gel~i~g~~~~~gy~~~--- 401 (542)
T PRK06018 327 MTEMSPLGTLAALKPPFSKLPGDARLDVLQKQGYPPFGVEMKITD-DAGKELP-WDGKTFGRLKVRGPAVAAAYYRV--- 401 (542)
T ss_pred ccccCcccccccCccccccCCchhhhhccccCCCCCCCcEEEEEC-CCCCCCC-CCCCceeEEEEecCCcchhhhcC---
Confidence 999987665432111 0135789999999999999 5665554 22235799999999999999983
Q ss_pred cccccccCCCCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcccceEEEEecCCC---ceEE
Q 004977 548 TSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYVDNIMIHADPFH---NYCV 624 (721)
Q Consensus 548 t~~~f~~~~~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~~ 624 (721)
+...+. .+ |||+|||+|+++++|+++++||.+|+||+ +|++|+|.|||+++.+||+|.+|+|++.++. +.+.
T Consensus 402 ~~~~~~--~~--~~~~TGDl~~~~~~g~~~~~GR~~d~i~~-~G~~v~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~ 476 (542)
T PRK06018 402 DGEILD--DD--GFFDTGDVATIDAYGYMRITDRSKDVIKS-GGEWISSIDLENLAVGHPKVAEAAVIGVYHPKWDERPL 476 (542)
T ss_pred cccEec--CC--cEEEcCCEEEEcCCccEEEEecCCCeEEE-CCEEECHHHHHHHHHhCCcceeEEEEeccCCCcCceeE
Confidence 233332 44 89999999999999999999999999996 6999999999999999999999999998765 3578
Q ss_pred EEEEcChHHHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCCCCCCCCccCcccccC
Q 004977 625 ALVVPSHKALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEPWTPEAGLVTAALKIK 704 (721)
Q Consensus 625 a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~~~p~~~~~t~~gKi~ 704 (721)
++|++.++. ..+ .++++++++ .+|++|++|+.+++++++ | +|++||++
T Consensus 477 ~~v~~~~~~----------~~~---------------~~~l~~~~~-~~l~~~~~P~~i~~v~~i--P----~t~~GKi~ 524 (542)
T PRK06018 477 LIVQLKPGE----------TAT---------------REEILKYMD-GKIAKWWMPDDVAFVDAI--P----HTATGKIL 524 (542)
T ss_pred EEEEeCCCC----------CCC---------------HHHHHHHHH-hhCccccCCcEEEEeccC--C----CCCcchhh
Confidence 888776532 110 256888888 899999999999999988 6 99999999
Q ss_pred hHHHHHHHHH
Q 004977 705 REQLKAKFKD 714 (721)
Q Consensus 705 R~~l~~~~~~ 714 (721)
|++|+++|.+
T Consensus 525 r~~L~~~~~~ 534 (542)
T PRK06018 525 KTALREQFKD 534 (542)
T ss_pred HHHHHHHHhc
Confidence 9999998865
No 86
>PRK13388 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.4e-64 Score=567.72 Aligned_cols=485 Identities=19% Similarity=0.274 Sum_probs=377.7
Q ss_pred CCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhCCC-CCCCEEEE
Q 004977 82 STMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGH-NVDTRAAI 160 (721)
Q Consensus 82 ~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv-~~gd~V~i 160 (721)
.|+.++|.+++ +|+++|+++ ++. .+||+||.++++++|.+|.+.|+ ++||+|++
T Consensus 3 ~~~~~~l~~~~--~p~~~Al~~------------~~~-----------~lTy~el~~~~~~la~~L~~~g~~~~~~~V~i 57 (540)
T PRK13388 3 DTIAQLLRDRA--GDDTIAVRY------------GDR-----------TWTWREVLAEAAARAAALIALADPDRPLHVGV 57 (540)
T ss_pred hhHHHHHHhhc--cCCceEEEE------------CCc-----------eeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEE
Confidence 57889998765 799999975 333 69999999999999999999999 89999999
Q ss_pred EccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccchhHHHhhhhcCCCccEEEEecCCCCCcc
Q 004977 161 LAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEKD 240 (721)
Q Consensus 161 ~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~ 240 (721)
+++|+++|+++++||+++|++++|++|.++.+++.+++++++++++|++++....+.++. .+.++.++ ++.
T Consensus 58 ~~~n~~~~v~~~lA~~~~Ga~~v~l~p~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~--~~~~~~i~-~~~------ 128 (540)
T PRK13388 58 LLGNTPEMLFWLAAAALGGYVLVGLNTTRRGAALAADIRRADCQLLVTDAEHRPLLDGLD--LPGVRVLD-VDT------ 128 (540)
T ss_pred ECCCCcHHHHHHHHHHhCCCEEEEecccCChHHHHHHHHhcCCCEEEEChhhhHHHHhhc--ccCceEEE-ccc------
Confidence 999999999999999999999999999999999999999999999999987766554431 23333332 211
Q ss_pred CCccCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHHHHHHHhhCCCCCCCcEE
Q 004977 241 SGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNPGRSDVY 320 (721)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~d~~ 320 (721)
..+.++...... ..+.....++++++|+|||||||.||||+++|+++..........+ ++.++|++
T Consensus 129 ------------~~~~~~~~~~~~-~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~-~~~~~d~~ 194 (540)
T PRK13388 129 ------------PAYAELVAAAGA-LTPHREVDAMDPFMLIFTSGTTGAPKAVRCSHGRLAFAGRALTERF-GLTRDDVC 194 (540)
T ss_pred ------------hhhhhhhccccC-cCCCCCCCCCCeEEEEECCCCCCCCCEEEecHHHHHHHHHHHHHHh-CCCCCCEE
Confidence 012222221111 1111235679999999999999999999999999998888888887 89999999
Q ss_pred EeccChHHHHHHHHH-HHHHHhcceEeeCccccccccchhhccCccCcceeecceEEeechHHHHHHHHHHHHHHHhhcc
Q 004977 321 LAYLPLAHVLELAAE-SIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKGG 399 (721)
Q Consensus 321 l~~~pl~h~~g~~~~-~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~ 399 (721)
++.+|++|.+++... +.++..|+++++.+... ...++..++++++|++..+|+.+..+.......
T Consensus 195 l~~~p~~~~~~~~~~~~~~l~~G~~~v~~~~~~--------~~~~~~~i~~~~vt~~~~~p~~l~~l~~~~~~~------ 260 (540)
T PRK13388 195 YVSMPLFHSNAVMAGWAPAVASGAAVALPAKFS--------ASGFLDDVRRYGATYFNYVGKPLAYILATPERP------ 260 (540)
T ss_pred EEeeCchhhcchHHHHHHHHHcCcEEEECCCCC--------HHHHHHHHHHhCCeEEEehHHHHHHHHhCCCCc------
Confidence 999999999988764 45789999998743211 111233399999999999999988776421000
Q ss_pred hhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHHHHHHHhhCCcccccccc
Q 004977 400 LTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMGAPIGQAYGL 479 (721)
Q Consensus 400 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~~~~~~g~~l~~~YG~ 479 (721)
.....+++.+ + |++++++..+.+.+.+|+++++.||+
T Consensus 261 -----------------------------------------~~~~~~l~~~-~-G~~~~~~~~~~~~~~~~~~l~~~YG~ 297 (540)
T PRK13388 261 -----------------------------------------DDADNPLRVA-F-GNEASPRDIAEFSRRFGCQVEDGYGS 297 (540)
T ss_pred -----------------------------------------cccccceEEE-E-CCCCCHHHHHHHHHHhCCceeccccc
Confidence 0000256643 3 55667777777777789999999999
Q ss_pred ccccccccccCCCCCCCCccCCCcCcceEE-----------EEecCCCCcccCCCCCCcceEEEc-cccccccccCCCcc
Q 004977 480 TETCAGSTFSEWDDPSVGRVGPPVPCCYIK-----------LVSWDEGGYKTSDKPMPRGEIVVG-GFNVTAGYFNNPGK 547 (721)
Q Consensus 480 TE~~~~~~~~~~~~~~~~~vG~p~p~~~v~-----------i~d~~~~~~~~~~~~g~~GEl~v~-g~~v~~gY~~~~~~ 547 (721)
||++.+++... ....+++|+|++|+++. ++| ++|..+ ..++..|||+++ |++++.||+++|+.
T Consensus 298 tE~~~~~~~~~--~~~~~~vG~p~~g~~i~~~~~~~~~~~~~~d-~~g~~~--~~~~~~GEl~v~~g~~~~~gY~~~~~~ 372 (540)
T PRK13388 298 SEGAVIVVREP--GTPPGSIGRGAPGVAIYNPETLTECAVARFD-AHGALL--NADEAIGELVNTAGAGFFEGYYNNPEA 372 (540)
T ss_pred ccccceeecCC--CCCCCCCCCCCCCcEEEcCCCCccccceecc-Cccccc--cCCCcceEEEEecCCcccccccCChHH
Confidence 99987665332 23457999999997653 222 222221 134578999998 99999999999999
Q ss_pred cccccccCCCCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcccceEEEEecCCCc---eEE
Q 004977 548 TSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYVDNIMIHADPFHN---YCV 624 (721)
Q Consensus 548 t~~~f~~~~~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~~---~~~ 624 (721)
|.+.| .+ |||+|||+|++|+||+++++||+||+||+ +|++|+|.|||++|.+||+|.+|+|++.+++. .++
T Consensus 373 t~~~~---~~--g~~~TGD~~~~~~dg~l~i~GR~~d~i~~-~G~~v~p~eIE~~l~~~~~V~~~~v~g~~~~~~g~~~~ 446 (540)
T PRK13388 373 TAERM---RH--GMYWSGDLAYRDADGWIYFAGRTADWMRV-DGENLSAAPIERILLRHPAINRVAVYAVPDERVGDQVM 446 (540)
T ss_pred HHHHh---hc--CceeccceEEEcCCCcEEEeccCCceEEE-CCEEeCHHHHHHHHHhCCCceEEEEEEccCCCCCceeE
Confidence 99998 66 89999999999999999999999999997 69999999999999999999999999988653 467
Q ss_pred EEEEcChHHHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHH-CCCCCcccccEEEeeCCCCCCCCCccCccccc
Q 004977 625 ALVVPSHKALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKA-AKLDKFEIPAKIKLMPEPWTPEAGLVTAALKI 703 (721)
Q Consensus 625 a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~L~~~~~P~~i~~~~~~~~p~~~~~t~~gKi 703 (721)
+++++.++. +.+ .++++++++. ..|++|++|..+++++++ | +|++||+
T Consensus 447 ~~v~~~~~~----------~~~---------------~~~l~~~l~~~~~l~~~~~P~~~~~v~~i--P----~t~~GKv 495 (540)
T PRK13388 447 AALVLRDGA----------TFD---------------PDAFAAFLAAQPDLGTKAWPRYVRIAADL--P----STATNKV 495 (540)
T ss_pred EEEEECCCC----------cCC---------------HHHHHHHHHhhccCCcccCCcEEEEeccC--C----CCCccee
Confidence 777765432 000 1455666652 359999999999999998 6 9999999
Q ss_pred ChHHHHHHHH
Q 004977 704 KREQLKAKFK 713 (721)
Q Consensus 704 ~R~~l~~~~~ 713 (721)
+|++|++...
T Consensus 496 ~R~~L~~~~~ 505 (540)
T PRK13388 496 LKRELIAQGW 505 (540)
T ss_pred eHHhHHHhcc
Confidence 9999998754
No 87
>PRK09088 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.7e-64 Score=561.04 Aligned_cols=474 Identities=23% Similarity=0.308 Sum_probs=379.1
Q ss_pred HHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEccCcHhH
Q 004977 89 EQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVEW 168 (721)
Q Consensus 89 ~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~ 168 (721)
+.+++.+||++|+.... ++. .+||+|+.++++++|++|.+.|+++||+|+|+++|+++|
T Consensus 2 ~~~a~~~p~~~a~~~~~----------~~~-----------~~ty~~l~~~v~~~a~~l~~~g~~~~~~v~i~~~~~~~~ 60 (488)
T PRK09088 2 AFHARLQPQRLAAVDLA----------LGR-----------RWTYAELDALVGRLAAVLRRRGCVDGERLAVLARNSVWL 60 (488)
T ss_pred chhhhhCCCceEEEecC----------CCc-----------EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH
Confidence 45678999999987421 333 699999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccchhHHHhhhhcCCCccEEEEecCCCCCccCCccCCCC
Q 004977 169 FIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEKDSGVSGGIS 248 (721)
Q Consensus 169 ~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~ 248 (721)
++++|||+++|++++|+++.++.+++.+++++++++++|+++...... .
T Consensus 61 ~~~~la~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~------~------------------------- 109 (488)
T PRK09088 61 VALHFACARVGAIYVPLNWRLSASELDALLQDAEPRLLLGDDAVAAGR------T------------------------- 109 (488)
T ss_pred HHHHHHHHHcCeEEEeeCccCCHHHHHHHHHhCCCCEEEEcchhhccc------c-------------------------
Confidence 999999999999999999999999999999999999999986543210 0
Q ss_pred CceEeeHHHHHhcCCC-CCCCCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHHHHHHHhhCCCCCCCcEEEeccChH
Q 004977 249 NWTVSSFSEVEKLGKR-SPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNPGRSDVYLAYLPLA 327 (721)
Q Consensus 249 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~d~~l~~~pl~ 327 (721)
....++++...... .........++++++++|||||||.||+|++||+++...+..+.... .+..+|++++.+|++
T Consensus 110 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~-~~~~~d~~l~~~pl~ 186 (488)
T PRK09088 110 --DVEDLAAFIASADALEPADTPSIPPERVSLILFTSGTSGQPKGVMLSERNLQQTAHNFGVLG-RVDAHSSFLCDAPMF 186 (488)
T ss_pred --cccchhhhhhhccccccccCCCCCCCCceEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhh-CCCCCcEEEEecchH
Confidence 00111121111111 01111234568899999999999999999999999998887777766 788999999999999
Q ss_pred HHHHHHH-HHHHHHhcceEeeCccccccccchhhccCccCcc--eeecceEEeechHHHHHHHHHHHHHHHhhcchhhHH
Q 004977 328 HVLELAA-ESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDV--SVLKPTLMAAVPAIFDRVREGVVKKVEEKGGLTKNL 404 (721)
Q Consensus 328 h~~g~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~i--~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~l 404 (721)
|.+++.. +..++..|+++++.+...... ++..+ .++++|+++++|++++.+.+....
T Consensus 187 ~~~g~~~~~~~~l~~g~~~~~~~~~~~~~--------~~~~~~~~~~~~t~~~~~P~~~~~l~~~~~~------------ 246 (488)
T PRK09088 187 HIIGLITSVRPVLAVGGSILVSNGFEPKR--------TLGRLGDPALGITHYFCVPQMAQAFRAQPGF------------ 246 (488)
T ss_pred HHHHHHHHHHHHHhcCCEEEEcCCCCHHH--------HHHHHHhhccCCcEEeeHHHHHHHHHhCcCc------------
Confidence 9999876 556788899988744321111 11113 358899999999999887642100
Q ss_pred HHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHHHHHHHhhCCccccccccccccc
Q 004977 405 FNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMGAPIGQAYGLTETCA 484 (721)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~~~~~~g~~l~~~YG~TE~~~ 484 (721)
.....+++|.+++||++++.+..+.+... |+++++.||+||++.
T Consensus 247 -----------------------------------~~~~~~~l~~~~~gG~~~~~~~~~~~~~~-g~~v~~~YG~TE~~~ 290 (488)
T PRK09088 247 -----------------------------------DAAALRHLTALFTGGAPHAAEDILGWLDD-GIPMVDGFGMSEAGT 290 (488)
T ss_pred -----------------------------------CccccccceEEEecCCCCCHHHHHHHHHh-CCceeeeeccccccc
Confidence 00011489999999999999887776654 899999999999987
Q ss_pred cccccCC---CCCCCCccCCCcCcceEEEEecCCCCcccCCCCCCcceEEEccccccccccCCCcccccccccCCCCcce
Q 004977 485 GSTFSEW---DDPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVDERGMCW 561 (721)
Q Consensus 485 ~~~~~~~---~~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~~~g~gw 561 (721)
+...... ...+.+++|.|+|+++++|+| +++.. ++.|+.|||+|+|++++.||+++++.|++.|. .+ ||
T Consensus 291 ~~~~~~~~~~~~~~~~~vG~~~~~~~~~i~d-~~~~~---~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~~~--~~--g~ 362 (488)
T PRK09088 291 VFGMSVDCDVIRAKAGAAGIPTPTVQTRVVD-DQGND---CPAGVPGELLLRGPNLSPGYWRRPQATARAFT--GD--GW 362 (488)
T ss_pred ccccCCCcccccccCCccccCCCCcEEEEEC-CCCCC---CcCCCceEEEEECCccchhhcCChhhhhhhhc--CC--CC
Confidence 5433211 123457899999999999998 55554 44788999999999999999999999998885 45 89
Q ss_pred EeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcccceEEEEecCCC---ceEEEEEEcChHHHHHHH
Q 004977 562 FYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYVDNIMIHADPFH---NYCVALVVPSHKALEKWA 638 (721)
Q Consensus 562 ~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~~a~vv~~~~~~~~~~ 638 (721)
|+|||+|++|++|.++|.||.||+||+ +|++|+|.+||++|.++|.|.+++|++.+++ +..+++|++.++.
T Consensus 363 ~~TGDl~~~~~~g~l~i~GR~~d~i~~-~G~~i~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~----- 436 (488)
T PRK09088 363 FRTGDIARRDADGFFWVVDRKKDMFIS-GGENVYPAEIEAVLADHPGIRECAVVGMADAQWGEVGYLAIVPADGA----- 436 (488)
T ss_pred eeecceEEEcCCCcEEEeccccceEEe-CCEEECHHHHHHHHHhCCCcceEEEEeCCCccCCceeEEEEEECCCC-----
Confidence 999999999999999999999999997 6999999999999999999999999998764 3577888876432
Q ss_pred HHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCCCCCCCCccCcccccChHHHHHHHHH
Q 004977 639 HEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEPWTPEAGLVTAALKIKREQLKAKFKD 714 (721)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~~~p~~~~~t~~gKi~R~~l~~~~~~ 714 (721)
.. -.+++.++++ .++++|++|..|.+++++ | +|++||++|++|++++.+
T Consensus 437 -----~~---------------~~~~l~~~~~-~~l~~~~~p~~i~~~~~i--P----~t~~gKi~r~~l~~~~~~ 485 (488)
T PRK09088 437 -----PL---------------DLERIRSHLS-TRLAKYKVPKHLRLVDAL--P----RTASGKLQKARLRDALAA 485 (488)
T ss_pred -----CC---------------CHHHHHHHHH-hhCcCCCCCCEEEEcccC--C----CCCCCceeHHHHHHHHHh
Confidence 00 0256888888 889999999999999987 6 999999999999998875
No 88
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=100.00 E-value=6.9e-64 Score=562.03 Aligned_cols=491 Identities=21% Similarity=0.247 Sum_probs=393.5
Q ss_pred CHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEc
Q 004977 83 TMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAILA 162 (721)
Q Consensus 83 tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~ 162 (721)
++.+.|++.++.+|+++|+.. .+. .+||+||.++++++|..|.+.|+++|++|+|++
T Consensus 1 ~~~~~l~~~a~~~p~~~a~~~------------~~~-----------~~ty~el~~~~~~~a~~L~~~g~~~~~~V~i~~ 57 (502)
T TIGR01734 1 KLIEAIQAFAETYPQTIAYRY------------QGQ-----------ELTYQQLKEQSDRLAAFIQKRILPKKSPIIVYG 57 (502)
T ss_pred CHHHHHHHHHHHCCCceEEEc------------CCc-----------EEeHHHHHHHHHHHHHHHHHhCCCCCCeEEEEe
Confidence 478999999999999999975 333 699999999999999999999999999999999
Q ss_pred cCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccchhHHHhhhhcCCCccEEEEecCCCCCccCC
Q 004977 163 ETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEKDSG 242 (721)
Q Consensus 163 ~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~ 242 (721)
+|+.+|+++++||+++|++++|+++.++.+++.++++.++++.++++........ ... ++.++
T Consensus 58 ~~~~~~~~~~la~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~-------~~~-~~~~~--------- 120 (502)
T TIGR01734 58 HMEPHMLVAFLGSIKSGHAYIPVDTSIPSERIEMIIEAAGPELVIHTAELSIDAV-------GTQ-IITLS--------- 120 (502)
T ss_pred CCCHHHHHHHHHHHHhCCEEeCCCCcChHHHHHHHHHhcCCCEEEeccccccccc-------CCc-eEEch---------
Confidence 9999999999999999999999999999999999999999999999876532211 111 11110
Q ss_pred ccCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHHHHHHHhhCCCCCCCcEEEe
Q 004977 243 VSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNPGRSDVYLA 322 (721)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~d~~l~ 322 (721)
...++...... ........+++.++|+|||||||.||+|+++|+++...+.+....+ .+..+++++.
T Consensus 121 -----------~~~~~~~~~~~-~~~~~~~~~~~~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~-~~~~~~~~l~ 187 (502)
T TIGR01734 121 -----------ALEQAETSGGP-VSFDHAVKGDDNYYIIYTSGSTGNPKGVQISHDNLVSFTNWMLADF-PLSEGKQFLN 187 (502)
T ss_pred -----------HhhhhhhhcCC-ccccccCCCCCeEEEEECCCCCCCCCEEEEecHHHHHHHHHHHHhC-CCCCCceEEe
Confidence 01111111111 1111334678999999999999999999999999999988888877 8889999999
Q ss_pred ccChHHHHHHHHHHHHHHhcceEeeCccccccccchhhccCccCcceeecceEEeechHHHHHHHHHHHHHHHhhcchhh
Q 004977 323 YLPLAHVLELAAESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKGGLTK 402 (721)
Q Consensus 323 ~~pl~h~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~ 402 (721)
.+|++|.+++...+.++..|+++++.+.....+. ..++..+.++++|.+.++|++++.++.....
T Consensus 188 ~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~-----~~~~~~i~~~~~~~~~~~p~~~~~~l~~~~~---------- 252 (502)
T TIGR01734 188 QAPFSFDLSVMDLYPCLASGGTLHCLDKDITNNF-----KLLFEELPKTGLNVWVSTPSFVDMCLLDPNF---------- 252 (502)
T ss_pred ecCceechhHHHHHHHHHCCCEEEEcCHHHhcCH-----HHHHHHHHHcCCeEEEEChhHHHHHHhcccc----------
Confidence 9999999999888889999999988544322221 2223338899999999999998876542100
Q ss_pred HHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHHHHHHHhh-CCcccccccccc
Q 004977 403 NLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICM-GAPIGQAYGLTE 481 (721)
Q Consensus 403 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~~~~~~-g~~l~~~YG~TE 481 (721)
.....++++.+++||+++++++.+.+.+.+ ++++++.||+||
T Consensus 253 -------------------------------------~~~~~~~l~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~yG~tE 295 (502)
T TIGR01734 253 -------------------------------------NQENYPHLTHFLFCGEELPVKTAKALLERFPKATIYNTYGPTE 295 (502)
T ss_pred -------------------------------------ccccCCcccEEEEcCCcCCHHHHHHHHHHCCCcEEEeCccCCc
Confidence 001125899999999999999998887776 789999999999
Q ss_pred ccccccccCC-----CCCCCCccCCCcCcceEEEEecCCCCcccCCCCCCcceEEEccccccccccCCCcccccccccCC
Q 004977 482 TCAGSTFSEW-----DDPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVDE 556 (721)
Q Consensus 482 ~~~~~~~~~~-----~~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~~ 556 (721)
++..++.... ......++|.|.|+++++|+| +++.. +++|+.|||+++|+.++.||+++++.|.+.|.. .
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~vg~~~~~~~~~i~~-~~~~~---~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~-~ 370 (502)
T TIGR01734 296 ATVAVTSVKITQEILDQYPRLPIGFAKPDMNLFIMD-EEGEP---LPEGEKGEIVIVGPSVSKGYLNNPEKTAEAFFS-H 370 (502)
T ss_pred ceEEEEEEEccccccccCCccccccccCCCEEEEEC-CCCCC---CCCCCeeEEEEccccccccccCCcccchHhhee-C
Confidence 8765443221 112336899999999999999 45544 447899999999999999999999999988742 3
Q ss_pred CCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcccceEEEEecC--CC--ceEEEEEEcChH
Q 004977 557 RGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYVDNIMIHADP--FH--NYCVALVVPSHK 632 (721)
Q Consensus 557 ~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~--~~--~~~~a~vv~~~~ 632 (721)
++.+||+|||+|++|++ +|+++||.||+||+ +|++|+|.+||+++.++|.|++++|++.. +. ..++++|++...
T Consensus 371 ~~~~~~~TGDlg~~~~~-~l~i~GR~~d~i~~-~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~~v~~~~~ 448 (502)
T TIGR01734 371 EGQPAYRTGDAGTITDG-QLFYQGRLDFQIKL-HGYRIELEDIEFNLRQSSYIESAVVVPKYNKDHKVEYLIAAIVPETE 448 (502)
T ss_pred CCcEEEECCCEEEEECC-EEEEeccccCeEEE-CcEEeCHHHHHHHHHcCCCccEEEEEEEEcCCCCceEEEEEEEeccc
Confidence 44579999999999976 99999999999997 69999999999999999999999999853 22 368899988753
Q ss_pred HHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCCCCCCCCccCcccccChHHHHHHH
Q 004977 633 ALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEPWTPEAGLVTAALKIKREQLKAKF 712 (721)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~~~p~~~~~t~~gKi~R~~l~~~~ 712 (721)
... ....+.+++++.++ .+|++|++|+.+++++++ | +|++||++|++|++++
T Consensus 449 ~~~---------------------~~~~~~~~i~~~~~-~~l~~~~~P~~~~~v~~l--P----~t~~gKv~r~~l~~~~ 500 (502)
T TIGR01734 449 DFE---------------------KEFQLTKAIKKELK-KSLPAYMIPRKFIYRDQL--P----LTANGKIDRKALAEEV 500 (502)
T ss_pred ccc---------------------cchhhHHHHHHHHh-hhChhhcCCcEEEEcccc--C----CCCCCcccHHHHHHhh
Confidence 210 01123467888888 899999999999999988 6 9999999999999876
Q ss_pred H
Q 004977 713 K 713 (721)
Q Consensus 713 ~ 713 (721)
.
T Consensus 501 ~ 501 (502)
T TIGR01734 501 N 501 (502)
T ss_pred c
Confidence 4
No 89
>PRK06178 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.9e-63 Score=566.25 Aligned_cols=525 Identities=22% Similarity=0.285 Sum_probs=401.6
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHH
Q 004977 69 QIPELVEVPWKGASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLV 148 (721)
Q Consensus 69 ~~~~~~~~~~~~~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~ 148 (721)
++|+....+.+ ..++.++|+++++.+|+++|+.+ .++ .+||+||.++++++|.+|.
T Consensus 21 ~~~~~~~~~~~-~~~l~~~l~~~a~~~p~~~al~~------------~~~-----------~~Ty~~l~~~~~~la~~L~ 76 (567)
T PRK06178 21 GIPREPEYPHG-ERPLTEYLRAWARERPQRPAIIF------------YGH-----------VITYAELDELSDRFAALLR 76 (567)
T ss_pred CCCCCCCCCcC-cccHHHHHHHHHHHCCCceEEEE------------CCc-----------eeeHHHHHHHHHHHHHHHH
Confidence 44444333322 36899999999999999999975 333 6999999999999999999
Q ss_pred hCCCCCCCEEEEEccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccchhHHHhhhhcCCCccE
Q 004977 149 NFGHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKN 228 (721)
Q Consensus 149 ~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~ 228 (721)
+.|+++|++|+++++|+++|+++++||+++|++++|++|.++.+++.+++++++++++++++...+.+.+..... .++.
T Consensus 77 ~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~ii~~~~~~~~l~~~~~~~-~~~~ 155 (567)
T PRK06178 77 QRGVGAGDRVAVFLPNCPQFHIVFFGILKLGAVHVPVSPLFREHELSYELNDAGAEVLLALDQLAPVVEQVRAET-SLRH 155 (567)
T ss_pred HcCCCCCCEEEEECCCCcHHHHHHHHHHHhCeEEeecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHHHhhccC-Ccce
Confidence 999999999999999999999999999999999999999999999999999999999999998877776655443 3444
Q ss_pred EEEecCCCCCccCCccCCCC-----CceEeeHHHHHhcCC--CCCCCCCCCCCCCeEEEEeccCCCCCcchheeccHHHH
Q 004977 229 VIYFENDGSEKDSGVSGGIS-----NWTVSSFSEVEKLGK--RSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIV 301 (721)
Q Consensus 229 ii~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~--~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~ 301 (721)
++................+. ......+.++..... ..........++++|+|+|||||||.||||++||+|++
T Consensus 156 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~t~~~~~ 235 (567)
T PRK06178 156 VIVTSLADVLPAEPTLPLPDSLRAPRLAAAGAIDLLPALRACTAPVPLPPPALDALAALNYTGGTTGMPKGCEHTQRDMV 235 (567)
T ss_pred EEEeccccccccccccccccccccccccccccccHHHHhhccccccccCCCCCCCeEEEEeCCCCCCCCceEEeccHHHH
Confidence 44433211000000000000 000111222222111 11111233567999999999999999999999999998
Q ss_pred HHHHHHHhhCCCCCCCcEEEeccChHHHHHHHH-HHHHHHhcceEeeCccccccccchhhccCccCcceeecceEEeech
Q 004977 302 ATAAAIKTLIPNPGRSDVYLAYLPLAHVLELAA-ESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVP 380 (721)
Q Consensus 302 ~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P 380 (721)
..+.........+.++|++++++|++|.+|+.. ++.++..|+++++.+... +..++..++++++|.+.++|
T Consensus 236 ~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~l~~~~~--------~~~~~~~i~~~~~t~~~~~~ 307 (567)
T PRK06178 236 YTAAAAYAVAVVGGEDSVFLSFLPEFWIAGENFGLLFPLFSGATLVLLARWD--------AVAFMAAVERYRVTRTVMLV 307 (567)
T ss_pred HHHHHHHHHhccCCCCcEEEEecchHHHHHHHHHHHHHHHcCceEEEeCCCC--------HHHHHHHHHHhCCeEEeccH
Confidence 876655443226788999999999999999854 677899999999843211 12233349999999999999
Q ss_pred HHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEE--ecCCCCC
Q 004977 381 AIFDRVREGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMI--CGGAPLS 458 (721)
Q Consensus 381 ~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~--~gG~~l~ 458 (721)
..+..+..... . .....++++.+. +.|++++
T Consensus 308 ~~~~~l~~~~~--------~---------------------------------------~~~~l~~l~~~~~~~~~~~~~ 340 (567)
T PRK06178 308 DNAVELMDHPR--------F---------------------------------------AEYDLSSLRQVRVVSFVKKLN 340 (567)
T ss_pred HHHHHHHhCCC--------C---------------------------------------CCCCcchheeeeeccccccCC
Confidence 98887754210 0 000113556543 4568999
Q ss_pred HHHHHHHHHhhCCcccc-ccccccccccccccCC---C----CCCCCccCCCcCcceEEEEecCCCCcccCCCCCCcceE
Q 004977 459 ADSQRFINICMGAPIGQ-AYGLTETCAGSTFSEW---D----DPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEI 530 (721)
Q Consensus 459 ~~~~~~~~~~~g~~l~~-~YG~TE~~~~~~~~~~---~----~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl 530 (721)
+++.+.++..+|..++. .||+||++..++.... . ....+++|+|+||++++|+|++++..+ +.|+.|||
T Consensus 341 ~~~~~~~~~~~g~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~g~~v~v~d~~~~~~~---~~g~~Gel 417 (567)
T PRK06178 341 PDYRQRWRALTGSVLAEAAWGMTETHTCDTFTAGFQDDDFDLLSQPVFVGLPVPGTEFKICDFETGELL---PLGAEGEI 417 (567)
T ss_pred HHHHHHHHHHhCCcccccccccccccccceeccccccCccccccCCcccccccCCcEEEEEcCCCCCcC---CCCCceEE
Confidence 99999999888877764 7999998765443321 1 123467999999999999996666654 47889999
Q ss_pred EEccccccccccCCCcccccccccCCCCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcccc
Q 004977 531 VVGGFNVTAGYFNNPGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYVD 610 (721)
Q Consensus 531 ~v~g~~v~~gY~~~~~~t~~~f~~~~~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~ 610 (721)
+|+|++++.||+++++.+.+.| .+ |||+|||+|++++||+++|+||+||+||+ +|++|+|.+||+++.++|+|.
T Consensus 418 ~v~g~~v~~gY~~~~~~~~~~~---~d--g~~~TGDl~~~~~~g~l~i~GR~~d~i~~-~G~~i~~~eiE~~l~~~~~v~ 491 (567)
T PRK06178 418 VVRTPSLLKGYWNKPEATAEAL---RD--GWLHTGDIGKIDEQGFLHYLGRRKEMLKV-NGMSVFPSEVEALLGQHPAVL 491 (567)
T ss_pred EEECCcccccccCChhhhhhcc---cC--CceeecceEEEecCCeEEEEecccccEEE-CCEEECHHHHHHHHHhCCCee
Confidence 9999999999999999999888 67 89999999999999999999999999997 699999999999999999999
Q ss_pred eEEEEecCCC---ceEEEEEEcChHHHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeC
Q 004977 611 NIMIHADPFH---NYCVALVVPSHKALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMP 687 (721)
Q Consensus 611 ~~~V~g~~~~---~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~ 687 (721)
+++|++.+++ +.++++|++.++. .. ..++|+++++ ++|+.|++|. +.+++
T Consensus 492 ~~~v~~~~~~~~g~~~~~~v~~~~~~----------~~---------------~~~~l~~~~~-~~l~~~~~p~-i~~v~ 544 (567)
T PRK06178 492 GSAVVGRPDPDKGQVPVAFVQLKPGA----------DL---------------TAAALQAWCR-ENMAVYKVPE-IRIVD 544 (567)
T ss_pred EEEEEcCcCcccCcceEEEEEeCCCC----------cC---------------CHHHHHHHHH-hcCcccCCce-EEEec
Confidence 9999998765 3588888876532 00 0257888888 8999999996 77888
Q ss_pred CCCCCCCCccCcccccChHHHHHHHHHH
Q 004977 688 EPWTPEAGLVTAALKIKREQLKAKFKDD 715 (721)
Q Consensus 688 ~~~~p~~~~~t~~gKi~R~~l~~~~~~~ 715 (721)
++ | +|++||++|++|++++++.
T Consensus 545 ~i--P----~t~~GKv~r~~l~~~~~~~ 566 (567)
T PRK06178 545 AL--P----MTATGKVRKQDLQALAEEL 566 (567)
T ss_pred cC--C----CCCccceeHHHHHHHHHhh
Confidence 77 6 9999999999999988763
No 90
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=100.00 E-value=7.9e-64 Score=561.97 Aligned_cols=499 Identities=22% Similarity=0.278 Sum_probs=406.8
Q ss_pred CCHHHHHHHH-HHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEE
Q 004977 82 STMAALFEQS-CKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAI 160 (721)
Q Consensus 82 ~tl~~~~~~~-a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i 160 (721)
+...+++.++ ++.+||++|++. ++. .+||.||.++++++|++|.+.|+++|++|++
T Consensus 4 ~~~~~~~~~~~~~~~p~~~a~~~------------~~~-----------~~ty~~l~~~~~~~a~~L~~~g~~~g~~v~l 60 (508)
T TIGR02262 4 NAAEDLLDRNVVEGRGGKTAFID------------DIS-----------SLSYGELEAQVRRLGAALRRLGVKREERVLL 60 (508)
T ss_pred hHHHHHHHHHHhcccCCceEEEe------------CCc-----------eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEE
Confidence 4567778776 677999999974 332 6999999999999999999999999999999
Q ss_pred EccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccchhHHHhhhhcCCCccEEEEecCCCCCcc
Q 004977 161 LAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEKD 240 (721)
Q Consensus 161 ~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~ 240 (721)
+++|+++|+++++||+++|++++|+++.++.+++.++++.++++++|++....+.+.+....++.++.++..+....
T Consensus 61 ~~~~~~~~~~~~~a~~~~G~~~v~l~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 137 (508)
T TIGR02262 61 LMLDGVDFPIAFLGAIRAGIVPVALNTLLTADDYAYMLEDSRARVVFVSGELLPVIKAALGKSPHLEHRVVVGRPEA--- 137 (508)
T ss_pred ECCCCHHHHHHHHHHHHcCcEEeeccCCCCHHHHHHHHHhcCCeEEEEchhhHHHHHHHHhcCCCccEEEEeCCCCc---
Confidence 99999999999999999999999999999999999999999999999998887777777667777777776643211
Q ss_pred CCccCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHHHHH-HHhhCCCCCCCcE
Q 004977 241 SGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAA-IKTLIPNPGRSDV 319 (721)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~-~~~~~~~~~~~d~ 319 (721)
....+.++...... ...+....++++++|+|||||||.||||++||+++...+.. ....+ ++.++|+
T Consensus 138 ----------~~~~~~~~~~~~~~-~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~-~~~~~d~ 205 (508)
T TIGR02262 138 ----------GEVQLAELLATESE-QFKPAATQADDPAFWLYSSGSTGMPKGVVHTHSNPYWTAELYARNTL-GIREDDV 205 (508)
T ss_pred ----------ccccHHHHhhcCCC-ccCCCCCCCCCcEEEEeCCCCCCCCcEEEEechhHHHHHHHHhHHhc-CCCCCCE
Confidence 11234444332211 11223445789999999999999999999999999987766 34445 8899999
Q ss_pred EEeccChHHHHHHHH-HHHHHHhcceEeeCccccccccchhhccCccCcceeecceEEeechHHHHHHHHHHHHHHHhhc
Q 004977 320 YLAYLPLAHVLELAA-ESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKG 398 (721)
Q Consensus 320 ~l~~~pl~h~~g~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~ 398 (721)
+++.+|++|.+++.. .+.++..|+++++.+... . ...++..+++++||++.++|+++..+......
T Consensus 206 ~l~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~--~-----~~~~~~~i~~~~~t~~~~~P~~~~~~~~~~~~------ 272 (508)
T TIGR02262 206 VFSAAKLFFAYGLGNALTFPMSVGATTVLMGERP--T-----PDAVFDRLRRHQPTIFYGVPTLYAAMLADPNL------ 272 (508)
T ss_pred EEEcCchHHHHHHHHHHHHHHHcCceEEEeCCCC--C-----HHHHHHHHHHHCCcEEecchHHHHHHhcCccc------
Confidence 999999999999865 566789999988843221 1 12233348999999999999988876542100
Q ss_pred chhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHHHHHHHhhCCccccccc
Q 004977 399 GLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMGAPIGQAYG 478 (721)
Q Consensus 399 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~~~~~~g~~l~~~YG 478 (721)
+...++++|.+++||+++++++.+.|.+.+|+++++.||
T Consensus 273 -----------------------------------------~~~~~~~l~~~~~~G~~l~~~~~~~~~~~~~~~v~~~YG 311 (508)
T TIGR02262 273 -----------------------------------------PAEDQVRLRLCTSAGEALPAEVGQRWQARFGVDIVDGIG 311 (508)
T ss_pred -----------------------------------------cccccccceeEEEcCCCCCHHHHHHHHHHhCCchhhCcc
Confidence 000124899999999999999999999989999999999
Q ss_pred cccccccccccCCCCCCCCccCCCcCcceEEEEecCCCCcccCCCCCCcceEEEccccccccccCCCcccccccccCCCC
Q 004977 479 LTETCAGSTFSEWDDPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVDERG 558 (721)
Q Consensus 479 ~TE~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~~~g 558 (721)
+||++.+.+.....+...+++|+|+++++++|+| +++..+ ++|+.|||+++|+.++.||+++++.+++.| .+
T Consensus 312 ~tE~~~~~~~~~~~~~~~~~~G~~~~g~~v~i~d-~~~~~~---~~g~~Gel~i~~~~~~~gY~~~~~~~~~~~---~~- 383 (508)
T TIGR02262 312 STEMLHIFLSNLPGDVRYGTSGKPVPGYRLRLVG-DGGQDV---AAGEPGELLISGPSSATMYWNNRAKTRDTF---QG- 383 (508)
T ss_pred ccccCceeecCCccCCCCCCcCCCCCCcEEEEEC-CCCCCC---CCCCeeEEEEecCccccccCCCHHHhHhhh---hc-
Confidence 9999876655444444567999999999999999 666554 478999999999999999999999999888 56
Q ss_pred cceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcccceEEEEecCCC---ceEEEEEEcChHHHH
Q 004977 559 MCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYVDNIMIHADPFH---NYCVALVVPSHKALE 635 (721)
Q Consensus 559 ~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~~a~vv~~~~~~~ 635 (721)
+||+|||+++++++|.++++||.||+||+. |++|+|.+||++|.++|+|.++++++.++. ..+++++++.++..
T Consensus 384 -~~~~TGD~~~~~~~g~~~~~gR~~d~i~~~-G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~- 460 (508)
T TIGR02262 384 -EWTRSGDKYVRNDDGSYTYAGRTDDMLKVS-GIYVSPFEIESALIQHPAVLEAAVVGVEDEDGLIKPKAFIVLRPGQD- 460 (508)
T ss_pred -CceeccceEEEcCCccEEEeccccceeeeC-CEEECHHHHHHHHHhCCCeeEEEEEeccccCCCceeEEEEEeCCCCc-
Confidence 899999999999999999999999999985 999999999999999999999999997654 35778888765320
Q ss_pred HHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCCCCCCCCccCcccccChHHHHHH
Q 004977 636 KWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEPWTPEAGLVTAALKIKREQLKAK 711 (721)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~~~p~~~~~t~~gKi~R~~l~~~ 711 (721)
. .+.+.++|+++++ ++|++|++|..+++++++ | +|++||++|++|+++
T Consensus 461 -------~--------------~~~~~~~i~~~~~-~~l~~~~~p~~i~~~~~i--P----~t~~gKi~r~~l~~~ 508 (508)
T TIGR02262 461 -------I--------------DTALETELKEHVK-DRLAPYKYPRWIVFVDDL--P----KTATGKIQRFKLREG 508 (508)
T ss_pred -------c--------------ccccHHHHHHHHH-HhcccCCCCceEEEecCC--C----CCCCCcEehhhccCC
Confidence 0 0122467888888 889999999999999887 6 999999999998753
No 91
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=100.00 E-value=7.3e-64 Score=550.49 Aligned_cols=425 Identities=19% Similarity=0.225 Sum_probs=350.7
Q ss_pred eeHHHHHHHHHHHHHHHHhCCC-CCCCEEEEEccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEC
Q 004977 131 QTYGEVFDRACSFASGLVNFGH-NVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICD 209 (721)
Q Consensus 131 ~Ty~el~~~v~~lA~~L~~~Gv-~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~ 209 (721)
+.|+||.++++++|++|.+.|+ .+|++|+++++|+++++++++||+++|++++|++|.++.+++.++++++++++++++
T Consensus 20 ~~~~el~~~~~~~a~~L~~~g~~~~~~~V~i~~~n~~e~~~~~~A~~~~G~~~vpl~~~~~~~~~~~~~~~~~~~~~i~~ 99 (452)
T PRK07445 20 YNSQRFYQLAQQLYLQLQQLATPRTPPKILLAESDPLQFLAAFLAAVAAGCPVFLANPHWGQQEWQQVLNLVQPDQIWGL 99 (452)
T ss_pred cChHHHHHHHHHHHHHHHHhcCCCCCCeEEEecCCCHHHHHHHHHHHHhCcEEEeeccCCCHHHHHHHHHhcCCCEEEec
Confidence 6899999999999999999988 579999999999999999999999999999999999999999999999999999987
Q ss_pred ccchhHHHhhhhcCCCccEEEEecCCCCCccCCccCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEeccCCCCC
Q 004977 210 SKQLKKLSAVSSSLKTIKNVIYFENDGSEKDSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGL 289 (721)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~ 289 (721)
.+..... . .. . .. ......++++++++|||||||.
T Consensus 100 ~~~~~~~------~---------~~----~------------------------~~--~~~~~~~~~~~~i~~TSGTTG~ 134 (452)
T PRK07445 100 DQLKLSH------P---------PP----L------------------------PS--QGILPNLETGWIMIPTGGSSGQ 134 (452)
T ss_pred Ccccccc------C---------CC----C------------------------Cc--cccCCCCCCcEEEEeCCCCCCC
Confidence 6532100 0 00 0 00 0112356899999999999999
Q ss_pred cchheeccHHHHHHHHHHHhhCCCCCCCcEEEeccChHHHHHHHHHHHHHHhcceEeeCccccccccchhhccCccCcce
Q 004977 290 PKGVMITHGNIVATAAAIKTLIPNPGRSDVYLAYLPLAHVLELAAESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVS 369 (721)
Q Consensus 290 PKgV~~sh~~l~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~ 369 (721)
||||++||+++.+.+......+ .+.+ ++.++.+|++|.+|+...+.+++.|+++++.+...+... .....
T Consensus 135 PKgV~~t~~~l~~~~~~~~~~~-~~~~-~~~~~~~Pl~h~~g~~~~~~~l~~G~t~v~~~~~~~~~~--------~~~~~ 204 (452)
T PRK07445 135 IRFAIHTWETLTASVQGFQRYF-QLQQ-VNSFCVLPLYHVSGLMQFMRSFLTGGKLVILPYKRLKSG--------QELPP 204 (452)
T ss_pred CcEEEechHHHHHHHHHHHHHh-cCCC-CceEeccCchhhhhHHHHHHHHHcCCeEEEcChHhccch--------hhhhh
Confidence 9999999999998888877766 6654 467889999999999888889999999988653222211 01134
Q ss_pred eecceEEeechHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEE
Q 004977 370 VLKPTLMAAVPAIFDRVREGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRF 449 (721)
Q Consensus 370 ~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~ 449 (721)
.+++|++.++|++++.+.+.... ..+++|.
T Consensus 205 ~~~~t~~~~vP~~l~~l~~~~~~--------------------------------------------------~l~~l~~ 234 (452)
T PRK07445 205 NPSDFFLSLVPTQLQRLLQLRPQ--------------------------------------------------WLAQFRT 234 (452)
T ss_pred hcCceEEEehHHHHHHHHhhChh--------------------------------------------------hhhcceE
Confidence 67899999999999988651000 0148999
Q ss_pred EEecCCCCCHHHHHHHHHhhCCccccccccccccccccccCCCC--CCCCccCCCcCcceEEEEecCCCCcccCCCCCCc
Q 004977 450 MICGGAPLSADSQRFINICMGAPIGQAYGLTETCAGSTFSEWDD--PSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPR 527 (721)
Q Consensus 450 v~~gG~~l~~~~~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~~--~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~ 527 (721)
+++||+++++++.+.+.. +++++++.||+||++..++...+.+ ...+++|+|+|+++++|+ +|+.
T Consensus 235 i~~gG~~l~~~~~~~~~~-~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~p~~~v~i~------------~g~~ 301 (452)
T PRK07445 235 ILLGGAPAWPSLLEQARQ-LQLRLAPTYGMTETASQIATLKPDDFLAGNNSSGQVLPHAQITIP------------ANQT 301 (452)
T ss_pred EEECCccCCHHHHHHHHh-cCCeEecCcchhhhcccccccCchhhccCCCcCCccCCCCeEEEc------------CCCc
Confidence 999999999999888875 5899999999999986554433322 234789999999999997 2367
Q ss_pred ceEEEccccccccccCCCcccccccccCCCCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCc
Q 004977 528 GEIVVGGFNVTAGYFNNPGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSD 607 (721)
Q Consensus 528 GEl~v~g~~v~~gY~~~~~~t~~~f~~~~~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p 607 (721)
|||+|+|++++.||++++.. .+ |||+|||+|++|+||+|+|.||.||+||+ +|++|+|.|||++|.+||
T Consensus 302 Gel~v~g~~~~~gY~~~~~~--------~~--g~~~TGDl~~~d~dG~l~~~GR~dd~I~~-~G~~V~p~eIE~~l~~~p 370 (452)
T PRK07445 302 GNITIQAQSLALGYYPQILD--------SQ--GIFETDDLGYLDAQGYLHILGRNSQKIIT-GGENVYPAEVEAAILATG 370 (452)
T ss_pred ceEEEeCCccchhhcCCccC--------CC--CEEECCCEEEEcCCCCEEEEeecCCEEEE-CCEEECHHHHHHHHHhCC
Confidence 99999999999999986431 34 89999999999999999999999999996 699999999999999999
Q ss_pred ccceEEEEecCCCc---eEEEEEEcChHHHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEE
Q 004977 608 YVDNIMIHADPFHN---YCVALVVPSHKALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIK 684 (721)
Q Consensus 608 ~V~~~~V~g~~~~~---~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~ 684 (721)
+|.+|+|++.+++. .++|+|++.++.. + .++++++++ ++|++|++|+.++
T Consensus 371 ~V~~a~V~g~~~~~~g~~~~a~vv~~~~~~---------~-----------------~~~l~~~~~-~~L~~~~~P~~i~ 423 (452)
T PRK07445 371 LVQDVCVLGLPDPHWGEVVTAIYVPKDPSI---------S-----------------LEELKTAIK-DQLSPFKQPKHWI 423 (452)
T ss_pred CcceEEEEeccCcCCCcEEEEEEEeCCCCC---------C-----------------HHHHHHHHH-HhCCcccCCeEEE
Confidence 99999999998763 5889988764310 0 257888888 8999999999999
Q ss_pred eeCCCCCCCCCccCcccccChHHHHHHHHHHHH
Q 004977 685 LMPEPWTPEAGLVTAALKIKREQLKAKFKDDLQ 717 (721)
Q Consensus 685 ~~~~~~~p~~~~~t~~gKi~R~~l~~~~~~~i~ 717 (721)
+++++ | +|++||++|++|++.+.++|+
T Consensus 424 ~v~~l--P----~t~~GKi~r~~L~~~~~~~~~ 450 (452)
T PRK07445 424 PVPQL--P----RNPQGKINRQQLQQIAVQRLG 450 (452)
T ss_pred EecCC--C----CCCCcccCHHHHHHHHHHhhC
Confidence 99988 6 999999999999999999875
No 92
>PLN02479 acetate-CoA ligase
Probab=100.00 E-value=3.6e-63 Score=563.08 Aligned_cols=514 Identities=21% Similarity=0.253 Sum_probs=392.1
Q ss_pred CCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEE
Q 004977 82 STMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAIL 161 (721)
Q Consensus 82 ~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~ 161 (721)
.++..+|.+.++.+|+++|+.+ ++. .+||+||.++++++|.+|.+.|+++||+|+++
T Consensus 20 ~~~~~~~~~~~~~~p~~~a~~~------------~~~-----------~~ty~eL~~~~~~lA~~L~~~g~~~gd~V~i~ 76 (567)
T PLN02479 20 LTPLWFLERAAVVHPTRKSVVH------------GSV-----------RYTWAQTYQRCRRLASALAKRSIGPGSTVAVI 76 (567)
T ss_pred cCHHHHHHHHHhhCCCceEEEE------------CCc-----------eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEE
Confidence 5789999999999999999975 332 68999999999999999999999999999999
Q ss_pred ccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccchhHHHhhhhcCC-------CccEEEEecC
Q 004977 162 AETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLK-------TIKNVIYFEN 234 (721)
Q Consensus 162 ~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~-------~~~~ii~~~~ 234 (721)
++|+++|+++++||+++|++++|+++.++.+++.+++++++++++|+++...+....+...+. ....++.++.
T Consensus 77 ~~n~~~~~~~~la~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (567)
T PLN02479 77 APNIPAMYEAHFGVPMAGAVVNCVNIRLNAPTIAFLLEHSKSEVVMVDQEFFTLAEEALKILAEKKKSSFKPPLLIVIGD 156 (567)
T ss_pred CCCcHHHHHHHHHHHhCCcEEEEeccccCHHHHHHHHhhcCceEEEEchhhhhHHHHHHHHHhhcccccCCCceEEEecC
Confidence 999999999999999999999999999999999999999999999999887655544332221 1123444332
Q ss_pred CCCCccCCccCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHHHHHHHhhCCCC
Q 004977 235 DGSEKDSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNP 314 (721)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~ 314 (721)
..... ...... .......++++................++.++++|||||||.||||++||+++..........+ .+
T Consensus 157 ~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~~~~-~~ 233 (567)
T PLN02479 157 PTCDP-KSLQYA-LGKGAIEYEKFLETGDPEFAWKPPADEWQSIALGYTSGTTASPKGVVLHHRGAYLMALSNALIW-GM 233 (567)
T ss_pred CcCCc-cccccc-cccCcccHHHHHhccccccccCCCCCcccceEEEECCCCCCCCcEEEeccHHHHHHHHHHHhhc-CC
Confidence 21100 000000 0112335666654322111111222345678899999999999999999999887666555566 78
Q ss_pred CCCcEEEeccChHHHHHHHHHHH-HHHhcceEee--CccccccccchhhccCccCcceeecceEEeechHHHHHHHHHHH
Q 004977 315 GRSDVYLAYLPLAHVLELAAESI-MLCAGCAIGY--GSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVV 391 (721)
Q Consensus 315 ~~~d~~l~~~pl~h~~g~~~~~~-~l~~G~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~ 391 (721)
.+++++++.+|++|.+++...+. .+..|.++++ +++..+. ..++++++|++.++|++++.+.+...
T Consensus 234 ~~~~~~~~~~p~~h~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----------~~l~~~~~t~~~~~P~~~~~l~~~~~ 302 (567)
T PLN02479 234 NEGAVYLWTLPMFHCNGWCFTWTLAALCGTNICLRQVTAKAIY-----------SAIANYGVTHFCAAPVVLNTIVNAPK 302 (567)
T ss_pred CCCCEEEEecchhhhhhHHHHHHHHhhcCceEeccCCCHHHHH-----------HHHHHcCCeEEEecHHHHHHHHhhhh
Confidence 89999999999999999766443 4556665554 2333333 33999999999999999998875321
Q ss_pred HHHHhhcchhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHHHHHHHhhCC
Q 004977 392 KKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMGA 471 (721)
Q Consensus 392 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~~~~~~g~ 471 (721)
... ....++++.++++|+++++.+.+.+.+. +.
T Consensus 303 ~~~----------------------------------------------~~~~~~l~~~~~~G~~~~~~~~~~~~~~-~~ 335 (567)
T PLN02479 303 SET----------------------------------------------ILPLPRVVHVMTAGAAPPPSVLFAMSEK-GF 335 (567)
T ss_pred hcc----------------------------------------------cccccceeEEEEcCCCCCHHHHHHHHhc-CC
Confidence 100 0011478999999999999999888775 89
Q ss_pred ccccccccccccccccccCC----C------CCC-CCccCCCcCcce-EEEEecCCCCcccCCCCCCcceEEEccccccc
Q 004977 472 PIGQAYGLTETCAGSTFSEW----D------DPS-VGRVGPPVPCCY-IKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTA 539 (721)
Q Consensus 472 ~l~~~YG~TE~~~~~~~~~~----~------~~~-~~~vG~p~p~~~-v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~ 539 (721)
++++.||+||+++.++.... . ... ..++|.+.++++ ++|+|++++..++ .+-++.|||+++|++++.
T Consensus 336 ~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~i~d~~~~~~~~-~~g~~~GEl~v~g~~~~~ 414 (567)
T PLN02479 336 RVTHTYGLSETYGPSTVCAWKPEWDSLPPEEQARLNARQGVRYIGLEGLDVVDTKTMKPVP-ADGKTMGEIVMRGNMVMK 414 (567)
T ss_pred ceecccccccccccccceeccccccccCcccccccccccCCCcCCcCceeEEcCCCCcccC-CCCCCceEEEEeccchhh
Confidence 99999999998654432210 0 001 146788888886 8999865565543 111257999999999999
Q ss_pred cccCCCcccccccccCCCCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcccceEEEEecCC
Q 004977 540 GYFNNPGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYVDNIMIHADPF 619 (721)
Q Consensus 540 gY~~~~~~t~~~f~~~~~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~ 619 (721)
|||++|+.|.+.| .+ |||+|||+|++|++|+++|+||.||+||+ +|++|+|.|||++|.+||.|.+++|++.++
T Consensus 415 GY~~~~~~t~~~~---~~--g~~~TGDl~~~~~~g~l~~~GR~~d~i~~-~G~~v~~~eIE~~l~~~~~v~~~~v~~~~~ 488 (567)
T PLN02479 415 GYLKNPKANEEAF---AN--GWFHSGDLGVKHPDGYIEIKDRSKDIIIS-GGENISSLEVENVVYTHPAVLEASVVARPD 488 (567)
T ss_pred hhhcCcccccchh---cC--CceecceeEEEcCCccEEEeccccceEEe-CCEEEcHHHHHHHHHhCcccceeeEEeccc
Confidence 9999999999999 66 89999999999999999999999999997 699999999999999999999999999876
Q ss_pred C---ceEEEEEEcChHHHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCCCCCCCCc
Q 004977 620 H---NYCVALVVPSHKALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEPWTPEAGL 696 (721)
Q Consensus 620 ~---~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~~~p~~~~ 696 (721)
. +.+++++++.++.. .+ ..+...++|+++++ .+||.|++|+.+.+ .++ |
T Consensus 489 ~~~~~~~~~~v~~~~~~~----------~~----------~~~~~~~~l~~~~~-~~l~~~~~P~~~~~-~~i--P---- 540 (567)
T PLN02479 489 ERWGESPCAFVTLKPGVD----------KS----------DEAALAEDIMKFCR-ERLPAYWVPKSVVF-GPL--P---- 540 (567)
T ss_pred hhcCceeEEEEEecCccc----------cc----------chhhhHHHHHHHHH-hhcccccCCceEEe-ccC--C----
Confidence 5 36889998775420 00 01223467888888 89999999999887 444 6
Q ss_pred cCcccccChHHHHHHHHH
Q 004977 697 VTAALKIKREQLKAKFKD 714 (721)
Q Consensus 697 ~t~~gKi~R~~l~~~~~~ 714 (721)
+|++||++|++|++.+++
T Consensus 541 ~t~~gKv~r~~L~~~~~~ 558 (567)
T PLN02479 541 KTATGKIQKHVLRAKAKE 558 (567)
T ss_pred CCCccCeeHHHHHHHHHh
Confidence 999999999999988765
No 93
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.3e-63 Score=564.28 Aligned_cols=509 Identities=23% Similarity=0.304 Sum_probs=397.3
Q ss_pred CCCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEE
Q 004977 81 ASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAI 160 (721)
Q Consensus 81 ~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i 160 (721)
..|+.++|.++++++|+++|+++ ++. .+||+||.++++++|+.|.+.|+++||+|++
T Consensus 22 ~~~i~~~l~~~a~~~p~~~a~~~------------~~~-----------~lTy~~l~~~~~~~a~~L~~~gi~~gd~V~i 78 (557)
T PRK07059 22 YPSLADLLEESFRQYADRPAFIC------------MGK-----------AITYGELDELSRALAAWLQSRGLAKGARVAI 78 (557)
T ss_pred CCCHHHHHHHHHHHcCCCceEEE------------cCc-----------eeeHHHHHHHHHHHHHHHHHhCCCCCCEEEE
Confidence 46899999999999999999986 333 6999999999999999999999999999999
Q ss_pred EccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccchhHHHhhhhcCCCccEEEEecCCCCCcc
Q 004977 161 LAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEKD 240 (721)
Q Consensus 161 ~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~ 240 (721)
+++|+++++++++||+++|++++|++|.++.+++.+++++++++++|+++.....+..+.... .++.++..........
T Consensus 79 ~~~n~~~~~~~~la~~~~G~~~v~v~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 157 (557)
T PRK07059 79 MMPNVLQYPVAIAAVLRAGYVVVNVNPLYTPRELEHQLKDSGAEAIVVLENFATTVQQVLAKT-AVKHVVVASMGDLLGF 157 (557)
T ss_pred ECCCCHHHHHHHHHHHhcCeEEeccCcccCHHHHHHHHHccCceEEEEchhhHHHHHHhhccc-CCceeEEecccccccc
Confidence 999999999999999999999999999999999999999999999999887766555544332 2333333221100000
Q ss_pred C-------------CccCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHHHHHH
Q 004977 241 S-------------GVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAI 307 (721)
Q Consensus 241 ~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~ 307 (721)
. ....+ .......++++...............++++|+|+|||||||.||||+++|++++..+...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PK~v~~s~~~l~~~~~~~ 236 (557)
T PRK07059 158 KGHIVNFVVRRVKKMVPAW-SLPGHVRFNDALAEGARQTFKPVKLGPDDVAFLQYTGGTTGVSKGATLLHRNIVANVLQM 236 (557)
T ss_pred ccccccccccccccccccc-CCCCcccHHHHhhccCCCCCCCCCCCcCceEEEEeCCCCCCCCcEEEeecHHHHHHHHHH
Confidence 0 00000 001223455555443322222345678999999999999999999999999998766544
Q ss_pred HhhCC---CC---CCCcEEEeccChHHHHHHHH-HHHHHHhcceEeeCc-cccccccchhhccCccCcceeecceEEeec
Q 004977 308 KTLIP---NP---GRSDVYLAYLPLAHVLELAA-ESIMLCAGCAIGYGS-TLTMTDTSSKIKKGTKGDVSVLKPTLMAAV 379 (721)
Q Consensus 308 ~~~~~---~~---~~~d~~l~~~pl~h~~g~~~-~~~~l~~G~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~ 379 (721)
...+. .. .....+++.+|++|.+++.. .+.++..|++.++.+ +.. ...++..++++++|.+.++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~g~~~~~~~~~~~--------~~~~~~~i~~~~vt~~~~~ 308 (557)
T PRK07059 237 EAWLQPAFEKKPRPDQLNFVCALPLYHIFALTVCGLLGMRTGGRNILIPNPRD--------IPGFIKELKKYQVHIFPAV 308 (557)
T ss_pred hhhhcccccccCCCCCcEEEEeCCcHHHHHHHHHHHHHHhhcceEEEecCCcC--------HHHHHHHHHHhCCeeeecC
Confidence 33220 11 12457888999999988754 556778888766632 211 1112333899999999999
Q ss_pred hHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCH
Q 004977 380 PAIFDRVREGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSA 459 (721)
Q Consensus 380 P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~ 459 (721)
|+++..+...... .....+++|.++.||+++++
T Consensus 309 p~~~~~l~~~~~~-----------------------------------------------~~~~~~~l~~~~~gg~~~~~ 341 (557)
T PRK07059 309 NTLYNALLNNPDF-----------------------------------------------DKLDFSKLIVANGGGMAVQR 341 (557)
T ss_pred HHHHHHHHcCcCc-----------------------------------------------CcCCchhheEEEeccccCCH
Confidence 9999988652100 00012478999999999999
Q ss_pred HHHHHHHHhhCCccccccccccccccccccCCCC-CCCCccCCCcCcceEEEEecCCCCcccCCCCCCcceEEEcccccc
Q 004977 460 DSQRFINICMGAPIGQAYGLTETCAGSTFSEWDD-PSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVT 538 (721)
Q Consensus 460 ~~~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~~-~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~ 538 (721)
.+.+.+.+.+|+++++.||+||++.+++...... ...+++|+|+++++++|+| +++..+ ++|+.|||+++|+.++
T Consensus 342 ~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~vG~p~~g~~v~i~d-~~~~~~---~~g~~Gel~v~g~~~~ 417 (557)
T PRK07059 342 PVAERWLEMTGCPITEGYGLSETSPVATCNPVDATEFSGTIGLPLPSTEVSIRD-DDGNDL---PLGEPGEICIRGPQVM 417 (557)
T ss_pred HHHHHHHHHhCCCeeeccccccccchhhcCCCCCCCcCCcccCccCCcEEEEEC-CCCCCC---CCCCceEEEEeCCccc
Confidence 9999888888999999999999988766544322 2347999999999999998 566554 5889999999999999
Q ss_pred ccccCCCcccccccccCCCCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcccceEEEEecC
Q 004977 539 AGYFNNPGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYVDNIMIHADP 618 (721)
Q Consensus 539 ~gY~~~~~~t~~~f~~~~~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~ 618 (721)
.||+++++.|.+.|. .+ |||+|||+|++++||+++++||++|+||+ +|++|+|.+||+++.+||+|.+++|++.+
T Consensus 418 ~gY~~~~~~~~~~~~--~~--g~~~TGDl~~~~~~g~~~~~GR~~~~i~~-~G~~i~p~~iE~~l~~~~~V~~~~v~~~~ 492 (557)
T PRK07059 418 AGYWNRPDETAKVMT--AD--GFFRTGDVGVMDERGYTKIVDRKKDMILV-SGFNVYPNEIEEVVASHPGVLEVAAVGVP 492 (557)
T ss_pred hhhhcCHHHHhhhcc--cC--CceecCcEEEEcCCCcEEEecccccceEE-CCEEEcHHHHHHHHHhCCceeEEEEEecc
Confidence 999999999998885 56 89999999999999999999999999997 59999999999999999999999999977
Q ss_pred CC---ceEEEEEEcChHHHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCCCCCCCC
Q 004977 619 FH---NYCVALVVPSHKALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEPWTPEAG 695 (721)
Q Consensus 619 ~~---~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~~~p~~~ 695 (721)
+. +.++++|+...... + .++++++++ ++|+.|++|..+.+++++ |
T Consensus 493 ~~~~ge~~~~~v~~~~~~~---------~-----------------~~~l~~~~~-~~l~~~~~P~~i~~v~~~--P--- 540 (557)
T PRK07059 493 DEHSGEAVKLFVVKKDPAL---------T-----------------EEDVKAFCK-ERLTNYKRPKFVEFRTEL--P--- 540 (557)
T ss_pred cCCCCeeEEEEEEeCCCCC---------C-----------------HHHHHHHHH-HhcccccCCcEEEEeccC--C---
Confidence 54 35788887653210 0 256778888 889999999999999987 6
Q ss_pred ccCcccccChHHHHHH
Q 004977 696 LVTAALKIKREQLKAK 711 (721)
Q Consensus 696 ~~t~~gKi~R~~l~~~ 711 (721)
+|++||++|+.|+++
T Consensus 541 -~t~~GK~~r~~L~~~ 555 (557)
T PRK07059 541 -KTNVGKILRRELRDG 555 (557)
T ss_pred -CCcccceeHHHHHhh
Confidence 999999999999864
No 94
>PRK13390 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.6e-63 Score=558.49 Aligned_cols=487 Identities=20% Similarity=0.261 Sum_probs=375.7
Q ss_pred HHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEccCcHhHH
Q 004977 90 QSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVEWF 169 (721)
Q Consensus 90 ~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~ 169 (721)
.+|+++|+++|+.+.+ ++. .+||+||.++++++|+.|.+.|+++||+|+++++|+++++
T Consensus 5 ~~a~~~p~~~a~~~~~----------~~~-----------~lTy~el~~~~~~la~~L~~~gv~~gd~V~i~~~n~~~~~ 63 (501)
T PRK13390 5 THAQIAPDRPAVIVAE----------TGE-----------QVSYRQLDDDSAALARVLYDAGLRTGDVVALLSDNSPEAL 63 (501)
T ss_pred hhhhhCCCCcEEEecC----------CCe-----------EeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHH
Confidence 4678899999997531 233 7999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccchhHHHhhhhcCCCccEEEEecCCCCCccCCccCCCCC
Q 004977 170 IAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEKDSGVSGGISN 249 (721)
Q Consensus 170 ~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 249 (721)
++++||+++|++++|+++.++++++.+++++++++++++++............ ....+.+....
T Consensus 64 ~~~la~~~~Ga~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~---~~~~~~~~~~~------------- 127 (501)
T PRK13390 64 VVLWAALRSGLYITAINHHLTAPEADYIVGDSGARVLVASAALDGLAAKVGAD---LPLRLSFGGEI------------- 127 (501)
T ss_pred HHHHHHHHhCCEEeccccCCCHHHHHHHHHhcCCcEEEEcchhhhHHHHhhhc---cceEEEecCcc-------------
Confidence 99999999999999999999999999999999999999987654333222111 11122221110
Q ss_pred ceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEeccCCCCCcchhee--ccHHHHHHHH----HHHhhCCCCCCCcEEEec
Q 004977 250 WTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMI--THGNIVATAA----AIKTLIPNPGRSDVYLAY 323 (721)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~--sh~~l~~~~~----~~~~~~~~~~~~d~~l~~ 323 (721)
....++++...... +.....++.++|+|||||||.||||++ +|.++..... .....+ .+..+|++++.
T Consensus 128 ~~~~~~~~~~~~~~-----~~~~~~~~~a~i~~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 201 (501)
T PRK13390 128 DGFGSFEAALAGAG-----PRLTEQPCGAVMLYSSGTTGFPKGIQPDLPGRDVDAPGDPIVAIARAFY-DISESDIYYSS 201 (501)
T ss_pred cccccHHHHhcccC-----CCCCCCcccEEEEeCCCCCCCCCEEEeeccccccccchhhhHhhHHHHh-CCCCCCeEEec
Confidence 01123333322110 111122357999999999999999995 5666554321 122344 78889999999
Q ss_pred cChHHHHHHHHHHHHHHhcceEeeCccccccccchhhccCccCcceeecceEEeechHHHHHHHHHHHHHHHhhcchhhH
Q 004977 324 LPLAHVLELAAESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKGGLTKN 403 (721)
Q Consensus 324 ~pl~h~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~ 403 (721)
+|++|.+++......+..|+++++.+... ...++..++++++|++.++|+++..+.+......
T Consensus 202 ~p~~h~~~~~~~~~~~~~g~~~~~~~~~~--------~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~--------- 264 (501)
T PRK13390 202 APIYHAAPLRWCSMVHALGGTVVLAKRFD--------AQATLGHVERYRITVTQMVPTMFVRLLKLDADVR--------- 264 (501)
T ss_pred ccchhhhHHHHHHHHHhcCceEEEcCCcC--------HHHHHHHHHHcCCeEEEecHHHHHHHHhccchhc---------
Confidence 99999998866555677899998743211 1223334999999999999999998865211000
Q ss_pred HHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHHHHHHHhhCCcccccccccccc
Q 004977 404 LFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMGAPIGQAYGLTETC 483 (721)
Q Consensus 404 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~~~~~~g~~l~~~YG~TE~~ 483 (721)
+....+++|.+++||+++++++.+.+.+.+|.++++.||+||++
T Consensus 265 ------------------------------------~~~~~~~l~~v~~~g~~~~~~~~~~~~~~~~~~~~~~YG~tE~~ 308 (501)
T PRK13390 265 ------------------------------------TRYDVSSLRAVIHAAAPCPVDVKHAMIDWLGPIVYEYYSSTEAH 308 (501)
T ss_pred ------------------------------------ccCChhhhheEEEcCCCCCHHHHHHHHHhcCCceeeeecccccC
Confidence 00011478999999999999999999888899999999999998
Q ss_pred ccccccCCC-CCCCCccCCCcCcceEEEEecCCCCcccCCCCCCcceEEEccccccccccCCCcccccccccCCCCcceE
Q 004977 484 AGSTFSEWD-DPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVDERGMCWF 562 (721)
Q Consensus 484 ~~~~~~~~~-~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~~~g~gw~ 562 (721)
.++...... ....+++|+|+++ .++|+| +++.. +++|+.|||+|+|++++.||+++|+.|.+.|. ..+.+|+
T Consensus 309 ~~~~~~~~~~~~~~~~~G~~~~g-~~~i~d-~~~~~---~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~--~~~~~w~ 381 (501)
T PRK13390 309 GMTFIDSPDWLAHPGSVGRSVLG-DLHICD-DDGNE---LPAGRIGTVYFERDRLPFRYLNDPEKTAAAQH--PAHPFWT 381 (501)
T ss_pred ceEEecchhhccCCCCcCCcccc-eEEEEC-CCCCC---CCCCCceEEEEecCCccccccCChhhhHHhhc--cCCCceE
Confidence 755433322 2345799999999 799998 56654 45899999999999999999999999999885 3223899
Q ss_pred eeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcccceEEEEecCCC---ceEEEEEEcChHHHHHHHH
Q 004977 563 YTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYVDNIMIHADPFH---NYCVALVVPSHKALEKWAH 639 (721)
Q Consensus 563 ~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~~a~vv~~~~~~~~~~~ 639 (721)
+|||+|++|+||+++|.||.||+||+ +|++|+|.|||++|.+||+|.+++|++.++. +.++++|++.++.
T Consensus 382 ~tGDl~~~~~dg~l~~~gR~~~~i~~-~G~~v~p~eIE~~l~~~~~v~~~~v~~~~~~~~~e~~~~~v~~~~~~------ 454 (501)
T PRK13390 382 TVGDLGSVDEDGYLYLADRKSFMIIS-GGVNIYPQETENALTMHPAVHDVAVIGVPDPEMGEQVKAVIQLVEGI------ 454 (501)
T ss_pred EcCceEEECCCCeEEEeeccccceeE-CCeeeCHHHHHHHHHhCCCeeEEEEEeccCcccCceeEEEEEecCCC------
Confidence 99999999999999999999999997 5999999999999999999999999998865 3588888766431
Q ss_pred HhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCCCCCCCCccCcccccChHHHH
Q 004977 640 EASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEPWTPEAGLVTAALKIKREQLK 709 (721)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~~~p~~~~~t~~gKi~R~~l~ 709 (721)
.. .+...++|+++++ .+|+.|++|..+++++++ | +|++||++|++|+
T Consensus 455 ----~~------------~~~~~~~l~~~~~-~~l~~~~~P~~~~~~~~i--P----~t~~GKi~r~~L~ 501 (501)
T PRK13390 455 ----RG------------SDELARELIDYTR-SRIAHYKAPRSVEFVDEL--P----RTPTGKLVKGLLR 501 (501)
T ss_pred ----Cc------------chhhHHHHHHHHH-HhcccCCCCcEEEEeccC--C----CCCccceehhhcC
Confidence 00 0112367888888 889999999999999998 6 9999999999874
No 95
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=100.00 E-value=2.6e-63 Score=564.47 Aligned_cols=508 Identities=23% Similarity=0.319 Sum_probs=397.1
Q ss_pred CCCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHH-hCCCCCCCEEE
Q 004977 81 ASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLV-NFGHNVDTRAA 159 (721)
Q Consensus 81 ~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~-~~Gv~~gd~V~ 159 (721)
..++.++|.++++++|+++|++. +++ .+||+||.++++++|+.|. +.|+++||+|+
T Consensus 24 ~~~~~~~l~~~~~~~~~~~a~~~------------~~~-----------~~Ty~el~~~~~~la~~L~~~~g~~~g~~V~ 80 (560)
T PRK08751 24 FRTVAEVFATSVAKFADRPAYHS------------FGK-----------TITYREADQLVEQFAAYLLGELQLKKGDRVA 80 (560)
T ss_pred CCcHHHHHHHHHHhCCCCceEEE------------CCc-----------eeeHHHHHHHHHHHHHHHHHHhCCCCCCEEE
Confidence 46899999999999999999985 443 6999999999999999996 68999999999
Q ss_pred EEccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccchhHHHhhhhcCCCccEEEEecCCCCCc
Q 004977 160 ILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEK 239 (721)
Q Consensus 160 i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~ 239 (721)
++++|+++++++++||+++|++++|++|.++.+++.+++++++++++|+++.....+.......+ ...++..+......
T Consensus 81 i~~~~~~~~~~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 159 (560)
T PRK08751 81 LMMPNCLQYPIATFGVLRAGLTVVNVNPLYTPRELKHQLIDSGASVLVVIDNFGTTVQQVIADTP-VKQVITTGLGDMLG 159 (560)
T ss_pred EECCCCHHHHHHHHHHHHhCeEEeccCccCCHHHHHHHHHhcCCeEEEEcchhHHHHHHHhhCCC-ccEEEEechhhhcc
Confidence 99999999999999999999999999999999999999999999999999887666655544443 23333322100000
Q ss_pred --------------cCCccCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHHHH
Q 004977 240 --------------DSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAA 305 (721)
Q Consensus 240 --------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~ 305 (721)
....... .......+.+................++++++++|||||||.||||++||+++...+.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~ 238 (560)
T PRK08751 160 FPKAALVNFVVKYVKKLVPEY-RINGAIRFREALALGRKHSMPTLQIEPDDIAFLQYTGGTTGVAKGAMLTHRNLVANMQ 238 (560)
T ss_pred cccchhhhhhhhhhhcccccc-CCCccccHHHHHhccCCCCCCCCCCCcccEEEEEcCCCCCCCCCEEEEccHHHHHHHH
Confidence 0000000 0011234555544333222223445678999999999999999999999999988877
Q ss_pred HHHhhCCC----CCC-CcEEEeccChHHHHHHHH-HHHHHHhcceEee-CccccccccchhhccCccCcceeecceEEee
Q 004977 306 AIKTLIPN----PGR-SDVYLAYLPLAHVLELAA-ESIMLCAGCAIGY-GSTLTMTDTSSKIKKGTKGDVSVLKPTLMAA 378 (721)
Q Consensus 306 ~~~~~~~~----~~~-~d~~l~~~pl~h~~g~~~-~~~~l~~G~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~ 378 (721)
.....+ . +.+ ++++++.+|++|.+++.. .+.++..|++.++ .++... ..++..++++++|++.+
T Consensus 239 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--------~~~~~~i~~~~~t~~~~ 309 (560)
T PRK08751 239 QAHQWL-AGTGKLEEGCEVVITALPLYHIFALTANGLVFMKIGGCNHLISNPRDM--------PGFVKELKKTRFTAFTG 309 (560)
T ss_pred HHHHhh-ccccccCCCCceEEEecChHHHHHHHHhhhhHhhccceEEEecCcCCH--------HHHHHHHHhcceeEecC
Confidence 665544 2 333 467788999999999865 4556777777665 222211 12233489999999999
Q ss_pred chHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCC
Q 004977 379 VPAIFDRVREGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLS 458 (721)
Q Consensus 379 ~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~ 458 (721)
+|.++..+.+.... .....+++|.+++||++++
T Consensus 310 ~p~~~~~l~~~~~~-----------------------------------------------~~~~l~~lr~v~~gG~~~~ 342 (560)
T PRK08751 310 VNTLFNGLLNTPGF-----------------------------------------------DQIDFSSLKMTLGGGMAVQ 342 (560)
T ss_pred hHHHHHHHHcCcCc-----------------------------------------------CCcchhhheeeeeCCCCCC
Confidence 99999887652100 0001147999999999999
Q ss_pred HHHHHHHHHhhCCccccccccccccccccccCCC-CCCCCccCCCcCcceEEEEecCCCCcccCCCCCCcceEEEccccc
Q 004977 459 ADSQRFINICMGAPIGQAYGLTETCAGSTFSEWD-DPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNV 537 (721)
Q Consensus 459 ~~~~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~-~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v 537 (721)
+++.+.+++.+|+++++.||+||++..++..... ....+++|.|+++++++|+| +++..+ +.|+.|||+|+|+.+
T Consensus 343 ~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~vG~~~~~~~v~i~d-~~~~~~---~~g~~Gel~v~~~~~ 418 (560)
T PRK08751 343 RSVAERWKQVTGLTLVEAYGLTETSPAACINPLTLKEYNGSIGLPIPSTDACIKD-DAGTVL---AIGEIGELCIKGPQV 418 (560)
T ss_pred HHHHHHHHHHhCCeEEEeeccccCCCceecccccccccCCCcCccCCCceEEEEC-CCCCCC---CCCCceEEEEecCcc
Confidence 9999999998899999999999998776554332 22347899999999999999 666554 478899999999999
Q ss_pred cccccCCCcccccccccCCCCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcccceEEEEec
Q 004977 538 TAGYFNNPGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYVDNIMIHAD 617 (721)
Q Consensus 538 ~~gY~~~~~~t~~~f~~~~~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~ 617 (721)
+.||+++++.|.+.|. .+ |||+|||+|++|++|+++++||.+|+||+ +|++|+|.+||++|..||+|.+|+|++.
T Consensus 419 ~~gy~~~~~~~~~~~~--~~--g~~~TGD~~~~~~~g~l~i~GR~~d~i~~-~G~~v~p~eiE~~l~~~~~v~~~~v~~~ 493 (560)
T PRK08751 419 MKGYWKRPEETAKVMD--AD--GWLHTGDIARMDEQGFVYIVDRKKDMILV-SGFNVYPNEIEDVIAMMPGVLEVAAVGV 493 (560)
T ss_pred chhhcCChhhhhhccc--cC--CCccccceEEEcCCceEEEEeechhheeE-CCEEEcHHHHHHHHHhCcCeeeeEEEec
Confidence 9999999999998885 55 89999999999999999999999999997 5999999999999999999999999998
Q ss_pred CCCc---eEEEEEEcChHHHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCCCCCCC
Q 004977 618 PFHN---YCVALVVPSHKALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEPWTPEA 694 (721)
Q Consensus 618 ~~~~---~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~~~p~~ 694 (721)
++.. .++++++..... . + .++++++++ .+|++|++|+.+++++++ |
T Consensus 494 ~~~~~ge~~~~~v~~~~~~---------~--~---------------~~~l~~~~~-~~l~~~~~P~~v~~v~~l--P-- 542 (560)
T PRK08751 494 PDEKSGEIVKVVIVKKDPA---------L--T---------------AEDVKAHAR-ANLTGYKQPRIIEFRKEL--P-- 542 (560)
T ss_pred CCCCCCceEEEEEEcCCCC---------C--C---------------HHHHHHHHH-HhhhhccCCeEEEEhhhC--C--
Confidence 7653 466666654211 0 0 256777887 889999999999999988 6
Q ss_pred CccCcccccChHHHHHH
Q 004977 695 GLVTAALKIKREQLKAK 711 (721)
Q Consensus 695 ~~~t~~gKi~R~~l~~~ 711 (721)
+|++||++|++|++.
T Consensus 543 --~t~~gKv~r~~L~~~ 557 (560)
T PRK08751 543 --KTNVGKILRRELRDA 557 (560)
T ss_pred --CCccccccHHHHHHh
Confidence 999999999999875
No 96
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=100.00 E-value=9.7e-63 Score=557.15 Aligned_cols=509 Identities=25% Similarity=0.336 Sum_probs=392.2
Q ss_pred CCCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEE
Q 004977 81 ASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAI 160 (721)
Q Consensus 81 ~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i 160 (721)
..|+.++|+++++++|+++|+.+ +++ .+||.||.++++++|++|.+.|+++||+|++
T Consensus 20 ~~~~~~~~~~~~~~~p~~~a~~~------------~~~-----------~~ty~el~~~~~~~a~~L~~~gi~~g~~V~i 76 (541)
T TIGR03205 20 RGTLPDLLSKAAADYGPRPALEF------------RDR-----------PITYTELEAMAETAAAALLRAGYGKDASVAL 76 (541)
T ss_pred CCCHHHHHHHHHHHcCCCceEEE------------CCc-----------EeeHHHHHHHHHHHHHHHHHcCCCCCCEEEE
Confidence 46899999999999999999975 333 6999999999999999999999999999999
Q ss_pred EccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccc--hhHHHhhhhcCCCccEEEEecCCCCC
Q 004977 161 LAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQ--LKKLSAVSSSLKTIKNVIYFENDGSE 238 (721)
Q Consensus 161 ~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~--~~~~~~~~~~~~~~~~ii~~~~~~~~ 238 (721)
+++|+++++++++||+++|++++|++|.++.+++.+++++++++.+|+++.. .+.+.+.... ..+..++..+.....
T Consensus 77 ~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~i~~~~~~~vi~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 155 (541)
T TIGR03205 77 YLGNTPDHPINFFGALKAGARVVHLSPLDGERALSHKLSDSGARLLITSDLAALLPMALKFLEK-GLLDRLIVCEDDNWG 155 (541)
T ss_pred ECCCChHHHHHHHHHHhcCeEEEecCCCCCHHHHHHHHhhcCceEEEEeCchhhhHHHHHhhhc-ccceEEEEecccccc
Confidence 9999999999999999999999999999999999999999999999998632 1222222111 123334443322110
Q ss_pred c-cCCccCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHHHHHHHhhC----CC
Q 004977 239 K-DSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLI----PN 313 (721)
Q Consensus 239 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~----~~ 313 (721)
. ..............+++++...... ........++++++++|||||||.||||+++|+++........... ..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~ 234 (541)
T TIGR03205 156 KVGTPQAPIPADPRIVTYADFVKGAAA-PAEWPAVTPDDVALLQYTGGTTGLPKGAMLTHGNLTSAVSIYDVWGKPSRAT 234 (541)
T ss_pred cccccccccCCCcccccHHHHHhcCCC-CCCCCCCCccCeEEEEECCCCCCCCcEEEEeHHHHHHHHHHHHhhccccccc
Confidence 0 0000001112234556666543221 1112345678999999999999999999999999886554321110 02
Q ss_pred CCCCcEEEeccChHHHHHHHH-HHHHHHhcceEeeCccccccccchhhccCccCcceeecceEEeechHHHHHHHHHHHH
Q 004977 314 PGRSDVYLAYLPLAHVLELAA-ESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVK 392 (721)
Q Consensus 314 ~~~~d~~l~~~pl~h~~g~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~ 392 (721)
....+++++.+|++|.+++.. .+.++..|+++++.+... ...++..++++++|++.++|+++..+.+....
T Consensus 235 ~~~~~~~l~~~p~~~~~~~~~~~~~~l~~g~~~~~~~~~~--------~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~ 306 (541)
T TIGR03205 235 RGDVERVICVLPLFHIYALTVILLRSLRRGDLISLHQRFD--------VAAVFRDIEEKRATVFPGVPTMWIALANDPSL 306 (541)
T ss_pred CCCCceEEEeccHHHHHHHHHHHHHHHhcCCEEEecCCCC--------HHHHHHHHHHcCCeEeechHHHHHHHHhCccc
Confidence 234578999999999998766 566788999887743211 12233339999999999999999887642100
Q ss_pred HHHhhcchhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHHHHHHHhhCCc
Q 004977 393 KVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMGAP 472 (721)
Q Consensus 393 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~~~~~~g~~ 472 (721)
+....+++|.+++||+++++++.+++.+.++.+
T Consensus 307 -----------------------------------------------~~~~~~~l~~i~~gg~~~~~~~~~~~~~~~~~~ 339 (541)
T TIGR03205 307 -----------------------------------------------EKRDLSSLATIGSGGAPLPVEVANFFERKTGLK 339 (541)
T ss_pred -----------------------------------------------cccCccccceEEEccccCCHHHHHHHHHHhCCC
Confidence 000114799999999999999999998888999
Q ss_pred cccccccccccccccccCCC-CCCCCccCCCcCcceEEEEecC-CCCcccCCCCCCcceEEEccccccccccCCCccccc
Q 004977 473 IGQAYGLTETCAGSTFSEWD-DPSVGRVGPPVPCCYIKLVSWD-EGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSE 550 (721)
Q Consensus 473 l~~~YG~TE~~~~~~~~~~~-~~~~~~vG~p~p~~~v~i~d~~-~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~ 550 (721)
+++.||+||++..++..... ....+++|+|+++++++|++.+ ++.. +++|+.|||+++|++++.||+++|+.|++
T Consensus 340 ~~~~YG~TE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~v~~~d~~~~~---~~~g~~Gel~v~~~~~~~gy~~~~~~~~~ 416 (541)
T TIGR03205 340 LKSGWGMTETCSPGTGHPPEGPDKPGSIGLMLPGIELDVVSLDDPTKV---LPPGEVGELRIRGPNVTRGYWNRPEESAE 416 (541)
T ss_pred eecccccccCCcccccCCCCCCCCCCCcceeccCceeEEEecCCCCcc---CCCCCeeEEEEecCCccccccCChhhhHh
Confidence 99999999998776654332 2345789999999999987643 3333 45788999999999999999999999999
Q ss_pred ccccCCCCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcccceEEEEecCCC---ceEEEEE
Q 004977 551 VYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYVDNIMIHADPFH---NYCVALV 627 (721)
Q Consensus 551 ~f~~~~~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~~a~v 627 (721)
.| .+ +||+|||++++++||+++|+||.||+||+ +|++|+|.+||+++.+|++|.+++|++.+++ +.+++++
T Consensus 417 ~~---~~--~~~~TGD~~~~~~~g~l~i~GR~~~~i~~-~G~~i~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v 490 (541)
T TIGR03205 417 AF---VG--DRFLTGDIGYMDTDGYFFLVDRKKDMIIS-GGFNVYPQMIEQAIYEHPGVQEVIVIGIPDQYRGEAAKAFV 490 (541)
T ss_pred hh---cc--CCcccCceEEEcCCceEEEEccccCeEEE-CCEEECHHHHHHHHHhCCCeeeEEEEecCCcccCceEEEEE
Confidence 98 56 79999999999999999999999999996 6999999999999999999999999998755 3588888
Q ss_pred EcChHHHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCCCCCCCCccCcccccChHH
Q 004977 628 VPSHKALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEPWTPEAGLVTAALKIKREQ 707 (721)
Q Consensus 628 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~~~p~~~~~t~~gKi~R~~ 707 (721)
++.++.. ..+ .++++++++ ++|++|++|+.|++++++ | +|++||++|++
T Consensus 491 ~~~~~~~---------~~~---------------~~~l~~~~~-~~l~~~~~P~~i~~~~~i--P----~t~~gK~~r~~ 539 (541)
T TIGR03205 491 KLRPGAK---------PFS---------------LDELRAFLA-GKLGKHELPVAVEFVDEL--P----RTPVGKLSRHE 539 (541)
T ss_pred EECCCCC---------cCC---------------HHHHHHHHH-hhcccccCCcEEEEeccC--C----CCcccceeHhh
Confidence 8764310 000 256778887 899999999999999988 6 99999999998
Q ss_pred HH
Q 004977 708 LK 709 (721)
Q Consensus 708 l~ 709 (721)
|+
T Consensus 540 l~ 541 (541)
T TIGR03205 540 LR 541 (541)
T ss_pred cC
Confidence 74
No 97
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=4.2e-63 Score=562.89 Aligned_cols=514 Identities=26% Similarity=0.351 Sum_probs=394.7
Q ss_pred CCCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEE
Q 004977 81 ASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAI 160 (721)
Q Consensus 81 ~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i 160 (721)
.+++.++|++.++++|+++|+++ +++ .+||+||.+++.++|++|.+.|+++||+|++
T Consensus 23 ~~~~~~~~~~~a~~~p~~~a~~~------------~~~-----------~~ty~eL~~~~~~la~~L~~~gv~~gd~V~i 79 (563)
T PRK06710 23 IQPLHKYVEQMASRYPEKKALHF------------LGK-----------DITFSVFHDKVKRFANYLQKLGVEKGDRVAI 79 (563)
T ss_pred cccHHHHHHHHHHHCCCceEEEe------------cCe-----------eecHHHHHHHHHHHHHHHHHcCCCCCCEEEE
Confidence 46899999999999999999986 333 6999999999999999999999999999999
Q ss_pred EccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccchhHHHhhhhcCCCccEEEEecCCC--CC
Q 004977 161 LAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDG--SE 238 (721)
Q Consensus 161 ~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~ii~~~~~~--~~ 238 (721)
+++|++++++++|||+++|++++|++|.++.+++.++++.++++++++++.....+....... ....++...... ..
T Consensus 80 ~~~~~~~~~~~~lA~~~~G~~~vpi~p~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 158 (563)
T PRK06710 80 MLPNCPQAVIGYYGTLLAGGIVVQTNPLYTERELEYQLHDSGAKVILCLDLVFPRVTNVQSAT-KIEHVIVTRIADFLPF 158 (563)
T ss_pred ECCCChHHHHHHHHHHHcCeEEeccCcccCHHHHHHHHhccCCeEEEEeccchhhhhccchhh-ccceeEEecccccccc
Confidence 999999999999999999999999999999999999999999999999887655443332211 122222211000 00
Q ss_pred ccCC------------ccCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHHHHH
Q 004977 239 KDSG------------VSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAA 306 (721)
Q Consensus 239 ~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~ 306 (721)
.... ............|+.+.... ..........++++++++|||||||.||||++||+++......
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~ 237 (563)
T PRK06710 159 PKNLLYPFVQKKQSNLVVKVSESETIHLWNSVEKEV-NTGVEVPCDPENDLALLQYTGGTTGFPKGVMLTHKNLVSNTLM 237 (563)
T ss_pred ccccccchhhcccccccccccccchhhhhhhhhhcc-ccccccccCCCCCEEEEEcCCCCCCCCceEEEehHHHHHHHHH
Confidence 0000 00000000001122221111 1111111234578999999999999999999999999865443
Q ss_pred HHhhCCCC-CCCcEEEeccChHHHHHHHH-HHHHHHhcceEeeCccccccccchhhccCccCcceeecceEEeechHHHH
Q 004977 307 IKTLIPNP-GRSDVYLAYLPLAHVLELAA-ESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFD 384 (721)
Q Consensus 307 ~~~~~~~~-~~~d~~l~~~pl~h~~g~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~ 384 (721)
........ ..++++++.+|++|.+++.. .+.++..|+++++.++... ..++..++++++|++.++|+++.
T Consensus 238 ~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~--------~~~~~~i~~~~~t~~~~~P~~~~ 309 (563)
T PRK06710 238 GVQWLYNCKEGEEVVLGVLPFFHVYGMTAVMNLSIMQGYKMVLIPKFDM--------KMVFEAIKKHKVTLFPGAPTIYI 309 (563)
T ss_pred HHhhccCCCCCCceEEEeCchHHHHHHHHHHHHHHHcCCeEEEcCCCCH--------HHHHHHHHHcCCeEEeccHHHHH
Confidence 33322133 34568899999999999865 4567889999988543211 12333489999999999999999
Q ss_pred HHHHHHHHHHHhhcchhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHHHH
Q 004977 385 RVREGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRF 464 (721)
Q Consensus 385 ~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~ 464 (721)
.+.+.... +....+++|.+++||+++++++.++
T Consensus 310 ~l~~~~~~-----------------------------------------------~~~~~~~lr~v~~gg~~~~~~~~~~ 342 (563)
T PRK06710 310 ALLNSPLL-----------------------------------------------KEYDISSIRACISGSAPLPVEVQEK 342 (563)
T ss_pred HHHcCCcc-----------------------------------------------ccCChhhhhheeeCCCcCCHHHHHH
Confidence 87642100 0001147899999999999999999
Q ss_pred HHHhhCCccccccccccccccccccCC-CCCCCCccCCCcCcceEEEEecCCCCcccCCCCCCcceEEEccccccccccC
Q 004977 465 INICMGAPIGQAYGLTETCAGSTFSEW-DDPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFN 543 (721)
Q Consensus 465 ~~~~~g~~l~~~YG~TE~~~~~~~~~~-~~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~ 543 (721)
+.+.+|+++++.||+||++.++..... .....+++|+|.+++.++|+|++++..+ +.|+.|||+++|+.++.||++
T Consensus 343 ~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~~~~~~~---~~g~~Gel~v~g~~~~~gY~~ 419 (563)
T PRK06710 343 FETVTGGKLVEGYGLTESSPVTHSNFLWEKRVPGSIGVPWPDTEAMIMSLETGEAL---PPGEIGEIVVKGPQIMKGYWN 419 (563)
T ss_pred HHHhhCCCEecccccccCccccccCcccccccCCccCCCCCCCeEEEEECCCCccC---CCCCceEEEEecCccchhhhC
Confidence 998889999999999999876543322 2234578999999999999996666544 478899999999999999999
Q ss_pred CCcccccccccCCCCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcccceEEEEecCCC---
Q 004977 544 NPGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYVDNIMIHADPFH--- 620 (721)
Q Consensus 544 ~~~~t~~~f~~~~~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~--- 620 (721)
+++.|...| .+ |||+|||+|+++++|+++++||.||+||+ +|++|+|.+||++|.+||.|.+++|++.++.
T Consensus 420 ~~~~~~~~~---~~--g~~~TGD~~~~~~~g~~~~~GR~dd~i~~-~G~~v~p~eiE~~l~~~~~v~~~~v~~~~~~~~g 493 (563)
T PRK06710 420 KPEETAAVL---QD--GWLHTGDVGYMDEDGFFYVKDRKKDMIVA-SGFNVYPREVEEVLYEHEKVQEVVTIGVPDPYRG 493 (563)
T ss_pred ChHHHhhhc---cc--CcccccceEEEcCCCcEEEeeccccEEEE-CCEEECHHHHHHHHHhCcceeeEEEEccccCCcC
Confidence 999999888 66 89999999999999999999999999997 6999999999999999999999999998764
Q ss_pred ceEEEEEEcChHHHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCCCCCCCCccCcc
Q 004977 621 NYCVALVVPSHKALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEPWTPEAGLVTAA 700 (721)
Q Consensus 621 ~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~~~p~~~~~t~~ 700 (721)
..++++|++.++. ..+ .++++++++ ++|+.|++|..+.+++++ | +|++
T Consensus 494 ~~~~~~v~~~~~~----------~~~---------------~~~l~~~~~-~~l~~~~~P~~~~~v~~i--P----~t~~ 541 (563)
T PRK06710 494 ETVKAFVVLKEGT----------ECS---------------EEELNQFAR-KYLAAYKVPKVYEFRDEL--P----KTTV 541 (563)
T ss_pred ceeEEEEEECCCC----------CCC---------------HHHHHHHHH-HhcccccCCcEEEEcccC--C----CCcc
Confidence 3588888876532 000 257788887 889999999999999988 6 9999
Q ss_pred cccChHHHHHHHHHH
Q 004977 701 LKIKREQLKAKFKDD 715 (721)
Q Consensus 701 gKi~R~~l~~~~~~~ 715 (721)
||++|++|+++++.+
T Consensus 542 GKi~r~~L~~~~~~~ 556 (563)
T PRK06710 542 GKILRRVLIEEEKRK 556 (563)
T ss_pred chhhHHHHHHHHhhc
Confidence 999999999988754
No 98
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=100.00 E-value=1.1e-62 Score=603.22 Aligned_cols=498 Identities=20% Similarity=0.214 Sum_probs=389.3
Q ss_pred CCCHHHHHHHHHHhCCC-CCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEE
Q 004977 81 ASTMAALFEQSCKSHPQ-DRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAA 159 (721)
Q Consensus 81 ~~tl~~~~~~~a~~~pd-~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~ 159 (721)
..++.+.|.++++++|+ +.|+.+. ++ +++||+||+++++++|+.|++ |+++||+|+
T Consensus 630 ~~~~~~~l~~~~~~~~~~~~ai~~~-----------~~-----------~~~Ty~el~~~~~~lA~~L~~-g~~~gd~V~ 686 (1140)
T PRK06814 630 DRTLFEALIEAAKIHGFKKLAVEDP-----------VN-----------GPLTYRKLLTGAFVLGRKLKK-NTPPGENVG 686 (1140)
T ss_pred cCCHHHHHHHHHHHcCCCCeEeECC-----------CC-----------CccCHHHHHHHHHHHHHHHHh-cCCCCCeEE
Confidence 47899999999999975 5665421 22 269999999999999999975 999999999
Q ss_pred EEccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccchhHH--HhhhhcCCCccEEEEecCCCC
Q 004977 160 ILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKL--SAVSSSLKTIKNVIYFENDGS 237 (721)
Q Consensus 160 i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~--~~~~~~~~~~~~ii~~~~~~~ 237 (721)
++++|+++++++++||+++|++++|+|++++.+++.+++++++++++|++++..+.. ......++....++.+++...
T Consensus 687 i~~~n~~~~~~~~la~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 766 (1140)
T PRK06814 687 VMLPNANGAAVTFFALQSAGRVPAMINFSAGIANILSACKAAQVKTVLTSRAFIEKARLGPLIEALEFGIRIIYLEDVRA 766 (1140)
T ss_pred EEcCCchHHHHHHHHHHHCCCEEEEcCCCCCHHHHHHHHHHcCCCEEEecHHHHhhhcchhHHHHhccCceEEEehHhhc
Confidence 999999999999999999999999999999999999999999999999997654322 122222333334444442210
Q ss_pred CccCCccCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHHHHHHHhhCCCCCCC
Q 004977 238 EKDSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNPGRS 317 (721)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~ 317 (721)
.. .....+++....... ........++|+++|+|||||||.||||++||+++.+.+......+ +++++
T Consensus 767 ~~----------~~~~~~~~~~~~~~~-~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~-~~~~~ 834 (1140)
T PRK06814 767 QI----------GLADKIKGLLAGRFP-LVYFCNRDPDDPAVILFTSGSEGTPKGVVLSHRNLLANRAQVAARI-DFSPE 834 (1140)
T ss_pred cC----------ChHHHHHHHhhccCC-ccccCCCCCCCcEEEEECCCccCCCcEEEecHHHHHHHHHHHHHhh-CCCCc
Confidence 00 000011111111111 0011135789999999999999999999999999999988888887 88999
Q ss_pred cEEEeccChHHHHHHH-HHHHHHHhcceEeeCcc-ccccccchhhccCccCcceeecceEEeechHHHHHHHHHHHHHHH
Q 004977 318 DVYLAYLPLAHVLELA-AESIMLCAGCAIGYGST-LTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVE 395 (721)
Q Consensus 318 d~~l~~~pl~h~~g~~-~~~~~l~~G~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~ 395 (721)
|++++.+|++|.+++. ..+.++..|+++++.+. ... +.+...++++++|++.++|++++.+.+...
T Consensus 835 d~~l~~~pl~h~~g~~~~~~~~l~~G~~~~~~~~~~~~--------~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~---- 902 (1140)
T PRK06814 835 DKVFNALPVFHSFGLTGGLVLPLLSGVKVFLYPSPLHY--------RIIPELIYDTNATILFGTDTFLNGYARYAH---- 902 (1140)
T ss_pred CEEEEecchHHHHHHHHHHHHHHHcCCEEEEecCcccH--------HHHHHHHHhcCCEEEEecHHHHHHHHhhcc----
Confidence 9999999999999984 46778999999987432 111 111223889999999999999988764210
Q ss_pred hhcchhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHHHHHHHhhCCcccc
Q 004977 396 EKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMGAPIGQ 475 (721)
Q Consensus 396 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~~~~~~g~~l~~ 475 (721)
....+++|.+++||+++++++.+.+.+.+|++++|
T Consensus 903 ---------------------------------------------~~~~~~lr~v~~gg~~l~~~~~~~~~~~~~~~~~~ 937 (1140)
T PRK06814 903 ---------------------------------------------PYDFRSLRYVFAGAEKVKEETRQTWMEKFGIRILE 937 (1140)
T ss_pred ---------------------------------------------cccccceeEEEEcCCcCCHHHHHHHHHHhCCcEEe
Confidence 00124899999999999999999999888999999
Q ss_pred ccccccccccccccCCCCCCCCccCCCcCcceEEEEecCCCCcccCCCCCCcceEEEccccccccccCCCcccccccccC
Q 004977 476 AYGLTETCAGSTFSEWDDPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVD 555 (721)
Q Consensus 476 ~YG~TE~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~ 555 (721)
.||+||++..++.......+.+++|+|+|++++++++.+ + .++.|||+++|++++.||+++++.+. +...
T Consensus 938 ~YG~TE~~~~~~~~~~~~~~~~~vG~p~~g~~~~~~~~~-~-------~~~~Gel~v~g~~~~~gY~~~~~~~~--~~~~ 1007 (1140)
T PRK06814 938 GYGVTETAPVIALNTPMHNKAGTVGRLLPGIEYRLEPVP-G-------IDEGGRLFVRGPNVMLGYLRAENPGV--LEPP 1007 (1140)
T ss_pred ccccccccceEEecCCCCCCCCcCCccCCCCeEEEeecC-C-------CCCceEEEEeCCCcchhhcCCCCCCc--cccC
Confidence 999999988766554444556899999999999998732 1 35789999999999999999875432 2111
Q ss_pred CCCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcccceEEEEecCCCc---eEEEEEEcChH
Q 004977 556 ERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYVDNIMIHADPFHN---YCVALVVPSHK 632 (721)
Q Consensus 556 ~~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~~---~~~a~vv~~~~ 632 (721)
.+ |||+|||+|++|+||+++++||.||+||+ +|++|+|.|||+++.+|+.|.+++|++.+++. .+++++...+.
T Consensus 1008 ~~--g~~~TGDl~~~d~dG~l~~~GR~~d~i~~-~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~g~~~~~~~~~~~~ 1084 (1140)
T PRK06814 1008 AD--GWYDTGDIVTIDEEGFITIKGRAKRFAKI-AGEMISLAAVEELAAELWPDALHAAVSIPDARKGERIILLTTASDA 1084 (1140)
T ss_pred CC--CeEecCCEEEECCCCeEEEEecccCeeee-CCEEECHHHHHHHHHhcCCcccEEEEEcccCCCCceEEEEEcCCCc
Confidence 34 89999999999999999999999999997 69999999999999999999999999988753 45555442211
Q ss_pred HHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCCCCCCCCccCcccccChHHHHHHH
Q 004977 633 ALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEPWTPEAGLVTAALKIKREQLKAKF 712 (721)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~~~p~~~~~t~~gKi~R~~l~~~~ 712 (721)
. .+++++++++.++++|++|+.+++++++ | +|++||++|++|++.+
T Consensus 1085 ~----------------------------~~~l~~~~~~~~l~~~~~P~~i~~v~~l--P----~t~~GKi~r~~L~~~~ 1130 (1140)
T PRK06814 1085 T----------------------------RAAFLAHAKAAGASELMVPAEIITIDEI--P----LLGTGKIDYVAVTKLA 1130 (1140)
T ss_pred C----------------------------HHHHHHHHHHcCCCcccCCcEEEEecCc--C----CCCCCCCcHHHHHHHH
Confidence 0 2567778874569999999999999998 6 9999999999999998
Q ss_pred HHHHH
Q 004977 713 KDDLQ 717 (721)
Q Consensus 713 ~~~i~ 717 (721)
++...
T Consensus 1131 ~~~~~ 1135 (1140)
T PRK06814 1131 EEAAA 1135 (1140)
T ss_pred HHhhc
Confidence 87654
No 99
>PRK07787 acyl-CoA synthetase; Validated
Probab=100.00 E-value=6e-63 Score=549.06 Aligned_cols=455 Identities=24% Similarity=0.308 Sum_probs=369.9
Q ss_pred HHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEccCcHhHHH
Q 004977 91 SCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVEWFI 170 (721)
Q Consensus 91 ~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~ 170 (721)
.+++.++++|+.. +++ .+||+||.++++++|..|. ++|+|+++++|+++|++
T Consensus 9 ~~~~~~~~~a~~~------------~~~-----------~~Ty~el~~~~~~~a~~L~-----~~~~V~l~~~~~~~~~~ 60 (471)
T PRK07787 9 VAAAADIADAVRI------------GGR-----------VLSRSDLAGAATAVAERVA-----GARRVAVLATPTLATVL 60 (471)
T ss_pred hhcccCCceEEEe------------CCc-----------EEEHHHHHHHHHHHHHHhc-----cCCEEEEECCCCHHHHH
Confidence 3456788899875 444 7999999999999999996 57999999999999999
Q ss_pred HHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccchhHHHhhhhcCCCccEEEEecCCCCCccCCccCCCCCc
Q 004977 171 AFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEKDSGVSGGISNW 250 (721)
Q Consensus 171 ~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~ 250 (721)
+++||+++|++++|+++..+.+++.++++++++++++++.... ...++.+.... .
T Consensus 61 ~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~il~~~~~~------~~~~~~~~~~~----~--------------- 115 (471)
T PRK07787 61 AVVGALIAGVPVVPVPPDSGVAERRHILADSGAQAWLGPAPDD------PAGLPHVPVRL----H--------------- 115 (471)
T ss_pred HHHHHHhcCcEEeecCCCCChHHHHHHHHhcCCCEEEecCCcc------cccccceeeec----c---------------
Confidence 9999999999999999999999999999999999999986321 01111110000 0
Q ss_pred eEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHHHHHHHhhCCCCCCCcEEEeccChHHHH
Q 004977 251 TVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNPGRSDVYLAYLPLAHVL 330 (721)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~ 330 (721)
..+ ........++|+++|+|||||||.||||+++|+++...+......+ .+.++|++++.+|++|.+
T Consensus 116 -~~~-----------~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~ 182 (471)
T PRK07787 116 -ARS-----------WHRYPEPDPDAPALIVYTSGTTGPPKGVVLSRRAIAADLDALAEAW-QWTADDVLVHGLPLFHVH 182 (471)
T ss_pred -ccc-----------cccCCCCCCCceEEEEECCCCCCCCCEEEEeHHHHHHHHHHHHHhc-CCCccceeEeccCCeeec
Confidence 000 0001224578999999999999999999999999999988888777 888999999999999999
Q ss_pred HHHH-HHHHHHhcceEeeCccccccccchhhccCccCcceeecceEEeechHHHHHHHHHHHHHHHhhcchhhHHHHHHH
Q 004977 331 ELAA-ESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKGGLTKNLFNIGY 409 (721)
Q Consensus 331 g~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~ 409 (721)
|+.. ++.++..|+++++.+... +..++..++ +++|++.++|+++..+.+.....
T Consensus 183 g~~~~~~~~l~~G~~~~~~~~~~--------~~~~~~~i~-~~~t~~~~~P~~~~~l~~~~~~~---------------- 237 (471)
T PRK07787 183 GLVLGVLGPLRIGNRFVHTGRPT--------PEAYAQALS-EGGTLYFGVPTVWSRIAADPEAA---------------- 237 (471)
T ss_pred hhHHHHHHHHhcCCEEEecCCCC--------HHHHHHHHh-hCceEEEcchHHHHHHHhCcccc----------------
Confidence 9876 677899999998743221 112233388 99999999999999887521000
Q ss_pred HHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHHHHHHHhhCCcccccccccccccccccc
Q 004977 410 KRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMGAPIGQAYGLTETCAGSTFS 489 (721)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~~~~~~g~~l~~~YG~TE~~~~~~~~ 489 (721)
...+++|.+++||+++++++.+.+.+.++.++++.||+||++...+..
T Consensus 238 --------------------------------~~l~~l~~~~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~ 285 (471)
T PRK07787 238 --------------------------------RALRGARLLVSGSAALPVPVFDRLAALTGHRPVERYGMTETLITLSTR 285 (471)
T ss_pred --------------------------------ccccceeEEEECCCCCCHHHHHHHHHHcCCCeecccCccccCcceecC
Confidence 011479999999999999999999998899999999999998755444
Q ss_pred CCCCCCCCccCCCcCcceEEEEecCCCCcccCCCCC-CcceEEEccccccccccCCCcccccccccCCCCcceEeeCcEE
Q 004977 490 EWDDPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPM-PRGEIVVGGFNVTAGYFNNPGKTSEVYKVDERGMCWFYTGDIG 568 (721)
Q Consensus 490 ~~~~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g-~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~~~g~gw~~TGDlg 568 (721)
.......+++|+|+++++++|+| +++..++ . .| ..|||+++|++++.||+++++.|++.|. .+ |||+|||+|
T Consensus 286 ~~~~~~~~~vG~~~~g~~~~i~d-~~~~~~~-~-~~~~~Gei~v~g~~~~~gy~~~~~~t~~~~~--~~--~~~~TGDlg 358 (471)
T PRK07787 286 ADGERRPGWVGLPLAGVETRLVD-EDGGPVP-H-DGETVGELQVRGPTLFDGYLNRPDATAAAFT--AD--GWFRTGDVA 358 (471)
T ss_pred CCCcccCCcccccCCCcEEEEEC-CCCCCCC-C-CCCCceEEEEECcccchhhcCChhhchhccc--CC--CceecCceE
Confidence 33334557899999999999999 4555443 1 23 3799999999999999999999999985 56 899999999
Q ss_pred EEccCCeEEEEecC-CCeEEcCCeeeeechHHHHHHhcCcccceEEEEecCCC---ceEEEEEEcChHHHHHHHHHhCCC
Q 004977 569 QVYPDGCLEIIDRK-KDIVKLQHGEYISLGKVEAALISSDYVDNIMIHADPFH---NYCVALVVPSHKALEKWAHEASIK 644 (721)
Q Consensus 569 ~~d~dG~l~i~GR~-~d~ik~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~~a~vv~~~~~~~~~~~~~~~~ 644 (721)
++|+||+++++||+ ||+||. +|++|+|.+||++|.++|.|++++|++.++. ..++|+|++.... +
T Consensus 359 ~~~~dg~l~~~GR~~d~~i~~-~G~~v~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~a~v~~~~~~----------~ 427 (471)
T PRK07787 359 VVDPDGMHRIVGRESTDLIKS-GGYRIGAGEIETALLGHPGVREAAVVGVPDDDLGQRIVAYVVGADDV----------A 427 (471)
T ss_pred EEcCCCCEEEeCCCCceeEee-CCEEECHHHHHHHHHhCCCcceEEEEcccccccCeEEEEEEEeCCCC----------C
Confidence 99999999999996 899996 6999999999999999999999999998765 3688998873221 0
Q ss_pred cccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCCCCCCCCccCcccccChHHHHH
Q 004977 645 YEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEPWTPEAGLVTAALKIKREQLKA 710 (721)
Q Consensus 645 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~~~p~~~~~t~~gKi~R~~l~~ 710 (721)
.+++.++++ ++|++|++|..|++++++ | +|++||++|++|++
T Consensus 428 -----------------~~~l~~~l~-~~l~~~~~P~~i~~~~~i--P----~~~~GKi~r~~L~~ 469 (471)
T PRK07787 428 -----------------ADELIDFVA-QQLSVHKRPREVRFVDAL--P----RNAMGKVLKKQLLS 469 (471)
T ss_pred -----------------HHHHHHHHH-hhcccccCCcEEEEeccC--C----CCCCccccHHHhcc
Confidence 256778887 889999999999999987 6 99999999999975
No 100
>PRK07868 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.6e-63 Score=588.93 Aligned_cols=518 Identities=19% Similarity=0.203 Sum_probs=384.3
Q ss_pred cccccccccCCCCCCCCCCccccccCCCCccccccCCCCCCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCcccee
Q 004977 43 ARKKKVKQRGVPVEVGGEPGYAIRNAQIPELVEVPWKGASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEK 122 (721)
Q Consensus 43 p~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~ 122 (721)
|+.. ++.+++++..+...+.++.... . ....|+.++|+++++++||++|+++ +++
T Consensus 417 ~~~~---~~~~~~~~~~~~~~~~~~~~~~---~---~~~~sl~~ll~~~a~~~pd~~Al~~------------~~~---- 471 (994)
T PRK07868 417 ANRS---VRTLAVETARTLPRLARLGQIN---D---HTRISLGRIIAEQARDAPKGEFLLF------------DGR---- 471 (994)
T ss_pred hhhh---hHHHHHHHHHhhhhHHHhhhcC---C---CCCccHHHHHHHHHHHCCCCeEEEe------------CCc----
Confidence 5566 7788888888888886655511 1 4446899999999999999999986 333
Q ss_pred ccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcC
Q 004977 123 LHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQ 202 (721)
Q Consensus 123 ~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~ 202 (721)
.+||+||+++++++|++|.+.|+++||+|+|+++|+++|+++++||+++|++++|+||. +++.+++++++
T Consensus 472 -------~lTY~eL~~ra~rlA~~L~~~Gv~~Gd~VaI~~~n~~e~v~a~lA~~~aGav~vpl~p~---~~l~~il~~s~ 541 (994)
T PRK07868 472 -------VHTYEAVNRRINNVVRGLIAVGVRQGDRVGVLMETRPSALVAIAALSRLGAVAVLMPPD---TDLAAAVRLGG 541 (994)
T ss_pred -------eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc---hhHHHHHhccC
Confidence 69999999999999999999999999999999999999999999999999999999985 68999999999
Q ss_pred ceEEEECccchhHHHhhhhcCCCccEEEEecCCCCCccCCccCCCCCceEeeHHHHHhcCCCCC--CCCCCCCCCCeEEE
Q 004977 203 VTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEKDSGVSGGISNWTVSSFSEVEKLGKRSP--VDPSLPSQNGVAVI 280 (721)
Q Consensus 203 ~~~vi~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~a~i 280 (721)
++++|++.+..+.+... ...++.++...... ...........++++.......+ ..+....++|+|+|
T Consensus 542 ~~~li~~~~~~~~~~~~------~~~iiv~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~I 611 (994)
T PRK07868 542 VTEIITDPTNLEAARQL------PGRVLVLGGGESRD----LDLPDDADVIDMEKIDPDAVELPGWYRPNPGLARDLAFI 611 (994)
T ss_pred CeEEEEChHHHHHHHhc------CceEEEecCCcccc----ccCCcchhhhhhhhcCcccccCCcccCCCCCCCCccEEE
Confidence 99999998766554331 13455544211100 00000001111221111000000 00112236899999
Q ss_pred EeccCCCCCcchheeccHHHHHHHHHHHhhCCCCCCCcEEEeccChHHHHHHHHHHHH-HHhcceEeeC---cccccccc
Q 004977 281 MYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNPGRSDVYLAYLPLAHVLELAAESIM-LCAGCAIGYG---STLTMTDT 356 (721)
Q Consensus 281 ~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~-l~~G~~~~~~---~~~~~~~~ 356 (721)
+|| ||||.||++.++|.+...........+ .+.++|++++.+|++|++++...+.+ +..|+++++. ++..+.
T Consensus 612 iyT-gStgtpKpk~vt~~~~~~~~~~~~~~~-~l~~~d~~L~~~Pl~h~~gl~~~l~~~l~gG~~vvl~~~~~~~~~~-- 687 (994)
T PRK07868 612 AFS-TAGGELVAKQITNYRWALSAFGTASAA-ALDRRDTVYCLTPLHHESGLLVSLGGAVVGGSRIALSRGLDPDRFV-- 687 (994)
T ss_pred EEe-CCCCCcCcEEEehHHHHHHHHhhhhhc-CCCCCCeEEEecChHHHhHHHHHHHHHhccceEEEecCCCCHHHHH--
Confidence 999 588888888888887665555555556 78899999999999999999875555 4455555553 333333
Q ss_pred chhhccCccCcceeecceEEeechHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHH
Q 004977 357 SSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVF 436 (721)
Q Consensus 357 ~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (721)
..|+++++|+++++|++++.|.+....
T Consensus 688 ---------~~I~~~~vT~~~~~Ps~l~~L~~~~~~-------------------------------------------- 714 (994)
T PRK07868 688 ---------QEVRQYGVTVVSYTWAMLREVVDDPAF-------------------------------------------- 714 (994)
T ss_pred ---------HHHHHhCCcEEEeHHHHHHHHHhCcCC--------------------------------------------
Confidence 339999999999999999988752100
Q ss_pred HHHHHHhCCcEEEEEecCCCCCHHHHHHHHHhhC-CccccccccccccccccccCCCCCCCCccCCCcCcc-eEEEEe--
Q 004977 437 KSVRAVLGGRIRFMICGGAPLSADSQRFINICMG-APIGQAYGLTETCAGSTFSEWDDPSVGRVGPPVPCC-YIKLVS-- 512 (721)
Q Consensus 437 ~~~~~~~~~~lr~v~~gG~~l~~~~~~~~~~~~g-~~l~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~p~~-~v~i~d-- 512 (721)
.....+++|.++ |+.+++++.+.+.+.++ ++++|.||+||++.+.+. ....+.+++|+|+|++ +++|.+
T Consensus 715 ---~~~~~~slr~~~--g~gl~~~l~~~~~~~~~~~~l~~~YG~TE~~~~~~~--~~~~~~~svG~p~pg~~~v~i~~~d 787 (994)
T PRK07868 715 ---VLHGNHPVRLFI--GSGMPTGLWERVVEAFAPAHVVEFFATTDGQAVLAN--VSGAKIGSKGRPLPGAGRVELAAYD 787 (994)
T ss_pred ---ccCCCCceEEEe--cCCCCHHHHHHHHHHhCchheeeeeecccccccccc--cCCCCCcccCCccCCCCceeEEEec
Confidence 000114789776 33499999998888886 789999999998765432 2234568999999998 777652
Q ss_pred c-------CCCCcccCCCCCCcceEEEccccccccccCCCccccc--ccccCCCCcceEeeCcEEEEccCCeEEEEecCC
Q 004977 513 W-------DEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSE--VYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKK 583 (721)
Q Consensus 513 ~-------~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~--~f~~~~~g~gw~~TGDlg~~d~dG~l~i~GR~~ 583 (721)
+ ++.++...+++|+.|||+++|+.. + +|+.+.. .| .+++|||+|||+|++|+||+|+|+||+|
T Consensus 788 ~~~g~li~d~~G~~~~~~~ge~Gel~~~~~~~----~-~p~~t~~~~~~---~~~dgw~~TGDlg~~d~dG~l~~~GR~d 859 (994)
T PRK07868 788 PEHDLILEDDRGFVRRAEVNEVGVLLARARGP----I-DPTASVKRGVF---APADTWISTEYLFRRDDDGDYWLVDRRG 859 (994)
T ss_pred CcCCceeecCCceEEEcCCCCceEEEEecCCC----C-ChhhhhHhccc---ccCCEEEeccceEEEcCCCCEEEeccCC
Confidence 1 122222224688999999999853 3 4554432 34 2234999999999999999999999999
Q ss_pred CeEEcCCeeeeechHHHHHHhcCcccceEEEEecCCCc--eEEEEEEcChHHHHHHHHHhCCCcccHHHHhccHHHHHHH
Q 004977 584 DIVKLQHGEYISLGKVEAALISSDYVDNIMIHADPFHN--YCVALVVPSHKALEKWAHEASIKYEDLSELCNKAEAVNEV 661 (721)
Q Consensus 584 d~ik~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~~--~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 661 (721)
|+||+ +|++|+|.|||++|.+||.|.+|+|++.+++. .++|+|++.++. ..+
T Consensus 860 d~Ik~-~G~~I~p~EIE~~L~~hp~V~~aaVvg~~d~~~~~~~a~Vv~~~~~----------~~~--------------- 913 (994)
T PRK07868 860 SVIRT-ARGPVYTEPVTDALGRIGGVDLAVTYGVEVGGRQLAVAAVTLRPGA----------AIT--------------- 913 (994)
T ss_pred CEEEe-CCceEcHHHHHHHHhcCCCeeEEEEEeecCCCCceEEEEEEeCCCC----------cCC---------------
Confidence 99997 58899999999999999999999999988653 589999976532 000
Q ss_pred HHHHHHHHHHCCCCCcccccEEEeeCCCCCCCCCccCcccccChHHHHHH
Q 004977 662 QQALSKVAKAAKLDKFEIPAKIKLMPEPWTPEAGLVTAALKIKREQLKAK 711 (721)
Q Consensus 662 ~~~l~~~~~~~~L~~~~~P~~i~~~~~~~~p~~~~~t~~gKi~R~~l~~~ 711 (721)
.++|+++++ + ||.||+|+.|++++++ | +|++||++|++|+++
T Consensus 914 ~~~L~~~l~-~-l~~y~vP~~i~~v~~l--P----~T~sGKi~r~~L~~~ 955 (994)
T PRK07868 914 AADLTEALA-S-LPVGLGPDIVHVVPEI--P----LSATYRPTVSALRAA 955 (994)
T ss_pred HHHHHHHHH-h-CCCCcCCeEEEEeCCC--C----CCccccEehHHHHhc
Confidence 267888987 5 9999999999999998 6 999999999999765
No 101
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=9.4e-63 Score=545.66 Aligned_cols=449 Identities=22% Similarity=0.276 Sum_probs=373.1
Q ss_pred CHHHHH-HHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEE
Q 004977 83 TMAALF-EQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAIL 161 (721)
Q Consensus 83 tl~~~~-~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~ 161 (721)
++.+.. ++.++++|+++|+.. +++ .+||+||.++++++|+.|.+.|+++||+|+++
T Consensus 3 ~~~~~~~~~~a~~~~~~~a~~~------------~~~-----------~~ty~el~~~~~~~a~~L~~~g~~~~~~v~l~ 59 (458)
T PRK09029 3 IFSDWPWRHWAQVRPQAIALRL------------NDE-----------VLTWQQLCARIDQLAAGFAQQGVVEGSGVALR 59 (458)
T ss_pred hhhcChHHHHHHhCCCceeeec------------CCc-----------ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEe
Confidence 344444 566899999999974 333 69999999999999999999999999999999
Q ss_pred ccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccchhHHHhhhhcCCCccEEEEecCCCCCccC
Q 004977 162 AETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEKDS 241 (721)
Q Consensus 162 ~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~ 241 (721)
++|+++++++++||+++|++++|+++..+++++.++++++++++++++.+... +.. +.....
T Consensus 60 ~~~~~~~~~~~la~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~-------~~~~~~---------- 121 (458)
T PRK09029 60 GKNSPETLLAYLALLQCGARVLPLNPQLPQPLLEELLPSLTLDFALVLEGENT-FSA-------LTSLHL---------- 121 (458)
T ss_pred cCCCHHHHHHHHHHHHcCCEEeecCCCCCHHHHHHHHHhcCCCEEEEcCcccc-hhh-------cccccc----------
Confidence 99999999999999999999999999999999999999999999999876432 110 000000
Q ss_pred CccCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHHHHHHHhhCCCCCCCcEEE
Q 004977 242 GVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNPGRSDVYL 321 (721)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~d~~l 321 (721)
.. .....+....++++++++|||||||.||||++||++++..+......+ .+.++|+++
T Consensus 122 --------------~~------~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~-~~~~~~~~l 180 (458)
T PRK09029 122 --------------QL------VEGAHAVAWQPQRLATMTLTSGSTGLPKAAVHTAQAHLASAEGVLSLM-PFTAQDSWL 180 (458)
T ss_pred --------------cc------ccccCcccCCCCCeEEEEECCCCCCCCCEEEEeHHHHHHHHHHHhhcC-CCCccceEE
Confidence 00 000112334678999999999999999999999999999998888877 889999999
Q ss_pred eccChHHHHHHHHHHHHHHhcceEeeCccccccccchhhccCccCcceeecceEEeechHHHHHHHHHHHHHHHhhcchh
Q 004977 322 AYLPLAHVLELAAESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKGGLT 401 (721)
Q Consensus 322 ~~~pl~h~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~ 401 (721)
..+|++|.+++...+.+|..|+++++.+...+.+. + .++|.+..+|+++..+......
T Consensus 181 ~~~p~~h~~g~~~~~~~l~~G~~v~~~~~~~~~~~-----------i--~~~t~~~~~P~~~~~l~~~~~~--------- 238 (458)
T PRK09029 181 LSLPLFHVSGQGIVWRWLYAGATLVVRDKQPLEQA-----------L--AGCTHASLVPTQLWRLLDNRSE--------- 238 (458)
T ss_pred EecCcHhhhhhHHHHHHHhCCceEEeCChHHHHHH-----------H--hhceeeecChHHHHHHHhcccc---------
Confidence 99999999998777778999999998664433332 4 3789999999999887652110
Q ss_pred hHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHHHHHHHhhCCcccccccccc
Q 004977 402 KNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMGAPIGQAYGLTE 481 (721)
Q Consensus 402 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~~~~~~g~~l~~~YG~TE 481 (721)
..++|.+++||+++++.+.+++.. +|+++++.||+||
T Consensus 239 ------------------------------------------~~~l~~i~~gG~~~~~~~~~~~~~-~g~~~~~~YG~tE 275 (458)
T PRK09029 239 ------------------------------------------PLSLKAVLLGGAAIPVELTEQAEQ-QGIRCWCGYGLTE 275 (458)
T ss_pred ------------------------------------------CCcceEEEECCCCCCHHHHHHHHH-cCCcEeccccccc
Confidence 137999999999999999988876 4999999999999
Q ss_pred ccccccccCCCCCCCCccCCCcCcceEEEEecCCCCcccCCCCCCcceEEEccccccccccCCCcccccccccCCCCcce
Q 004977 482 TCAGSTFSEWDDPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVDERGMCW 561 (721)
Q Consensus 482 ~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~~~g~gw 561 (721)
++...+....+ ...++|+|+++++++|++ |||+|+|+.++.||+++++.+.... .+ ||
T Consensus 276 ~~~~~~~~~~~--~~~~~G~~~~~~~~~i~~---------------gel~v~g~~~~~gY~~~~~~~~~~~---~~--~~ 333 (458)
T PRK09029 276 MASTVCAKRAD--GLAGVGSPLPGREVKLVD---------------GEIWLRGASLALGYWRQGQLVPLVN---DE--GW 333 (458)
T ss_pred cCcceeccCCC--CCCCCCCCCCCCEEEEeC---------------CEEEEecCceeeeeecCcccccccc---CC--Cc
Confidence 98765543322 235799999999999975 8999999999999999998876543 44 89
Q ss_pred EeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcccceEEEEecCCCc---eEEEEEEcChHHHHHHH
Q 004977 562 FYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYVDNIMIHADPFHN---YCVALVVPSHKALEKWA 638 (721)
Q Consensus 562 ~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~~---~~~a~vv~~~~~~~~~~ 638 (721)
|+|||+|++| ||+|+|.||+||+||+ +|++|+|.|||++|.+||+|.+|+|++.+++. .++|+|+++...
T Consensus 334 ~~TGD~~~~~-~g~l~~~gR~~d~i~~-~G~~v~p~eiE~~l~~~~~v~~~~v~~~~~~~~~~~~~a~v~~~~~~----- 406 (458)
T PRK09029 334 FATRDRGEWQ-NGELTILGRLDNLFFS-GGEGIQPEEIERVINQHPLVQQVFVVPVADAEFGQRPVAVVESDSEA----- 406 (458)
T ss_pred cCCCCcEEEe-CCEEEEecccccceee-CCEEeCHHHHHHHHhcCCCcceEEEEccCCcccCceEEEEEEcCccc-----
Confidence 9999999999 9999999999999997 59999999999999999999999999998763 588888876321
Q ss_pred HHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCCCCCCCCccCcccccChHHHHHHHHHHH
Q 004977 639 HEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEPWTPEAGLVTAALKIKREQLKAKFKDDL 716 (721)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~~~p~~~~~t~~gKi~R~~l~~~~~~~i 716 (721)
..++|+++++ ++|++|++|..+++++.. | +|.+||++|+.|++++++..
T Consensus 407 ----------------------~~~~l~~~~~-~~l~~~~~P~~~~~~~~~--p----~t~~gKi~r~~L~~~~~~~~ 455 (458)
T PRK09029 407 ----------------------AVVNLAEWLQ-DKLARFQQPVAYYLLPPE--L----KNGGIKISRQALKEWVAQQL 455 (458)
T ss_pred ----------------------CHHHHHHHHH-hhchhccCCeEEEEeccc--c----cCcCCCcCHHHHHHHHHhcc
Confidence 1267888998 899999999999999987 5 89999999999999887643
No 102
>PRK13383 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.4e-62 Score=552.51 Aligned_cols=476 Identities=20% Similarity=0.248 Sum_probs=377.7
Q ss_pred CCCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEE
Q 004977 81 ASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAI 160 (721)
Q Consensus 81 ~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i 160 (721)
..++.+.|.++++++|+++|+.. ++. .+||+|+.++++++|++|.+.|+++||+|++
T Consensus 34 ~~~~~~~~~~~a~~~p~~~a~~~------------~~~-----------~lTy~el~~~~~~la~~L~~~gi~~g~~V~i 90 (516)
T PRK13383 34 GTNPYTLLAVTAARWPGRTAIID------------DDG-----------ALSYRELQRATESLARRLTRDGVAPGRAVGV 90 (516)
T ss_pred CCcHHHHHHHHHHHCCCCcEEEe------------CCC-----------cEeHHHHHHHHHHHHHHHHhcCCCCCCEEEE
Confidence 47899999999999999999975 222 5999999999999999999999999999999
Q ss_pred EccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccchhHHHhhhhcCCCccEEEEecCCCCCcc
Q 004977 161 LAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEKD 240 (721)
Q Consensus 161 ~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~ 240 (721)
+++|++++++++|||+++|++++|+++.++.+++.+++++++++.+++++.....+..... .++.++...
T Consensus 91 ~~~~~~~~~~~~la~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~------~~~~~~~~~---- 160 (516)
T PRK13383 91 MCRNGRGFVTAVFAVGLLGADVVPISTEFRSDALAAALRAHHISTVVADNEFAERIAGADD------AVAVIDPAT---- 160 (516)
T ss_pred ECCCCHHHHHHHHHHHHhCeEEEEcCccCCHHHHHHHHhcCCCCEEEEchhHHHHHHhhhc------ceEEeccch----
Confidence 9999999999999999999999999999999999999999999999999877655443211 122221100
Q ss_pred CCccCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHH--HHHHHhhCCCCCCCc
Q 004977 241 SGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVAT--AAAIKTLIPNPGRSD 318 (721)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~--~~~~~~~~~~~~~~d 318 (721)
.... ... ..+...++.++|+|||||||.||||+++|...... .......+ ++.++|
T Consensus 161 ---------------~~~~----~~~--~~p~~~~~~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~-~~~~~d 218 (516)
T PRK13383 161 ---------------AGAE----ESG--GRPAVAAPGRIVLLTSGTTGKPKGVPRAPQLRSAVGVWVTILDRT-RLRTGS 218 (516)
T ss_pred ---------------hhhh----cCC--CCCCCCCCCcEEEECCCCCCCCCeeeecchhhhhhhhHHhHHhhh-ccCCCC
Confidence 0000 000 11123456789999999999999999999843221 12222334 778899
Q ss_pred EEEeccChHHHHHHHHHHHHHHhcceEeeCccccccccchhhccCccCcceeecceEEeechHHHHHHHHHHHHHHHhhc
Q 004977 319 VYLAYLPLAHVLELAAESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKG 398 (721)
Q Consensus 319 ~~l~~~pl~h~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~ 398 (721)
+++..+|++|.+++...+.++..|+++++..... ...++..++++++|.+.++|+++..+.+..... ..
T Consensus 219 ~~~~~~pl~h~~g~~~~~~~l~~G~~~~~~~~~~--------~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~-~~-- 287 (516)
T PRK13383 219 RISVAMPMFHGLGLGMLMLTIALGGTVLTHRHFD--------AEAALAQASLHRADAFTAVPVVLARILELPPRV-RA-- 287 (516)
T ss_pred eEEEecCCcchhhHHHHHHHHhcCCEEEECCCCC--------HHHHHHHHHHhCCcEEEecHHHHHHHHhccccc-cc--
Confidence 9999999999999988888899999998732211 111223388999999999999999886521100 00
Q ss_pred chhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHHHHHHHhhCCccccccc
Q 004977 399 GLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMGAPIGQAYG 478 (721)
Q Consensus 399 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~~~~~~g~~l~~~YG 478 (721)
....+++|.+++||+++++++.+.+.+.+|..+++.||
T Consensus 288 ------------------------------------------~~~~~~lr~i~~gG~~l~~~~~~~~~~~~g~~v~~~YG 325 (516)
T PRK13383 288 ------------------------------------------RNPLPQLRVVMSSGDRLDPTLGQRFMDTYGDILYNGYG 325 (516)
T ss_pred ------------------------------------------cCCCCceEEEEECCCCCCHHHHHHHHHHcCchhhhccc
Confidence 00114899999999999999999999989999999999
Q ss_pred cccccccccccCCC-CCCCCccCCCcCcceEEEEecCCCCcccCCCCCCcceEEEccccccccccCCCcccccccccCCC
Q 004977 479 LTETCAGSTFSEWD-DPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVDER 557 (721)
Q Consensus 479 ~TE~~~~~~~~~~~-~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~~~ 557 (721)
+||++..+...... ....+++|+|+|+++++|+| +++.. +++|+.|||+++|+.++.||++++. +.+ .+
T Consensus 326 ~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d-~~~~~---~~~g~~Gel~v~g~~~~~~Y~~~~~---~~~---~~ 395 (516)
T PRK13383 326 STEVGIGALATPADLRDAPETVGKPVAGCPVRILD-RNNRP---VGPRVTGRIFVGGELAGTRYTDGGG---KAV---VD 395 (516)
T ss_pred ccccccceeccccccccCCCcccCCCCCcEEEEEC-CCCCC---CCCCCceEEEEecCcccccccCCch---hhe---ec
Confidence 99998655443322 22347899999999999999 55554 4578999999999999999998754 223 45
Q ss_pred CcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcccceEEEEecCCC---ceEEEEEEcChHHH
Q 004977 558 GMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYVDNIMIHADPFH---NYCVALVVPSHKAL 634 (721)
Q Consensus 558 g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~~a~vv~~~~~~ 634 (721)
|||+|||+|++|++|+++++||.||+||+ +|++|+|.+||++|.+||.|.+++|++.++. +.++++|++.+..
T Consensus 396 --g~~~TGDl~~~d~~G~l~i~GR~~~~i~~-~G~~v~~~eiE~~l~~~~~v~~~~vv~~~~~~~g~~~~~~v~~~~~~- 471 (516)
T PRK13383 396 --GMTSTGDMGYLDNAGRLFIVGREDDMIIS-GGENVYPRAVENALAAHPAVADNAVIGVPDERFGHRLAAFVVLHPGS- 471 (516)
T ss_pred --CceecceeEEEcCCccEEEeccccceEEE-CCEEECHHHHHHHHHhCCCeeEEEEEeccccccCceEEEEEEECCCC-
Confidence 89999999999999999999999999997 6999999999999999999999999998755 3578888876431
Q ss_pred HHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCCCCCCCCccCcccccChHHHH
Q 004977 635 EKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEPWTPEAGLVTAALKIKREQLK 709 (721)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~~~p~~~~~t~~gKi~R~~l~ 709 (721)
..+ .++|+++++ ++|+.|++|..|++++++ | +|++||++|++|+
T Consensus 472 -------~~~-----------------~~~l~~~~~-~~l~~~~~p~~i~~v~~i--P----~t~~gKi~r~~L~ 515 (516)
T PRK13383 472 -------GVD-----------------AAQLRDYLK-DRVSRFEQPRDINIVSSI--P----RNPTGKVLRKELP 515 (516)
T ss_pred -------CCC-----------------HHHHHHHHH-HhcccCCCCcEEEEeCCC--C----CCCCCcCcHHHhC
Confidence 000 256888888 889999999999999987 6 9999999999874
No 103
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=100.00 E-value=3.3e-62 Score=548.69 Aligned_cols=490 Identities=21% Similarity=0.242 Sum_probs=397.3
Q ss_pred CCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEE
Q 004977 82 STMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAIL 161 (721)
Q Consensus 82 ~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~ 161 (721)
.++.++|+++++.+|+++|+.. ++. .+||+||.++++++|..|.+.|+++|++|+++
T Consensus 2 ~~~~~~l~~~a~~~p~~~~~~~------------~~~-----------~~t~~~l~~~~~~~a~~l~~~g~~~~~~v~~~ 58 (503)
T PRK04813 2 MDIIETIEEFAQTQPDFPAYDY------------LGE-----------KLTYGQLKEDSDALAAFIDSLKLPDKSPIIVF 58 (503)
T ss_pred chHHHHHHHHHHhCCCceEEEe------------CCc-----------EEeHHHHHHHHHHHHHHHHHhCCCCCCEEEEE
Confidence 5788999999999999999875 333 69999999999999999999999999999999
Q ss_pred ccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccchhHHHhhhhcCCCccEEEEecCCCCCccC
Q 004977 162 AETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEKDS 241 (721)
Q Consensus 162 ~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~ 241 (721)
++|+.+|+++++||+++|++++|+++.++.+++.++++.+++++++++...... ..
T Consensus 59 ~~~~~~~~~~~~a~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-------------------- 114 (503)
T PRK04813 59 GHMSPEMLATFLGAVKAGHAYIPVDVSSPAERIEMIIEVAKPSLIIATEELPLE----IL-------------------- 114 (503)
T ss_pred cCCCHHHHHHHHHHHHcCCEEecCCCCChHHHHHHHHHhcCCCEEEeccccccc----cc--------------------
Confidence 999999999999999999999999999999999999999999999998765110 00
Q ss_pred CccCCCCCceEeeHHHHHhcC--CCCCCCCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHHHHHHHhhCCCCCCCcE
Q 004977 242 GVSGGISNWTVSSFSEVEKLG--KRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNPGRSDV 319 (721)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~d~ 319 (721)
......++++.... ...........++++++++|||||||.||+|.++|+++...+......+ .+..+++
T Consensus 115 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~-~~~~~~~ 186 (503)
T PRK04813 115 -------GIPVITLDELKDIFATGNPYDFDHAVKGDDNYYIIFTSGTTGKPKGVQISHDNLVSFTNWMLEDF-ALPEGPQ 186 (503)
T ss_pred -------CCcEEehHHhhhhhhccccccccccCCCCCcEEEEECCCCCCCCcEEEeehHHHHHHHHHHHHHc-CCCcCce
Confidence 01122223322211 1111112334678899999999999999999999999999888888777 8899999
Q ss_pred EEeccChHHHHHHHHHHHHHHhcceEeeCccccccccchhhccCccCcceeecceEEeechHHHHHHHHHHHHHHHhhcc
Q 004977 320 YLAYLPLAHVLELAAESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKGG 399 (721)
Q Consensus 320 ~l~~~pl~h~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~ 399 (721)
++..+|++|..++...+.++..|+++++.+.....+. ..+...++++++|++..+|++++.+......
T Consensus 187 ~~~~~p~~~~~~~~~~~~~l~~g~~~v~~~~~~~~~~-----~~~~~~~~~~~~t~~~~~p~~~~~~~~~~~~------- 254 (503)
T PRK04813 187 FLNQAPYSFDLSVMDLYPTLASGGTLVALPKDMTANF-----KQLFETLPQLPINVWVSTPSFADMCLLDPSF------- 254 (503)
T ss_pred eeecCCcchhHhHHHHHHHHhcCCEEEEcChhhhcCH-----HHHHHHHHHcCCeEEEeChHHHHHHHHhhcc-------
Confidence 9999999999998888888999999988553322222 2233348899999999999999876542110
Q ss_pred hhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHHHHHHHhh-CCccccccc
Q 004977 400 LTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICM-GAPIGQAYG 478 (721)
Q Consensus 400 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~~~~~~-g~~l~~~YG 478 (721)
.+...+++|.++++|+++++.+.+++.+.+ ++.+++.||
T Consensus 255 ----------------------------------------~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~~~~~~yG 294 (503)
T PRK04813 255 ----------------------------------------NEEHLPNLTHFLFCGEELPHKTAKKLLERFPSATIYNTYG 294 (503)
T ss_pred ----------------------------------------CcccCCCceEEEEecCcCCHHHHHHHHHHCCCceEEeCcc
Confidence 011125899999999999999999998887 789999999
Q ss_pred cccccccccccCCC-----CCCCCccCCCcCcceEEEEecCCCCcccCCCCCCcceEEEccccccccccCCCcccccccc
Q 004977 479 LTETCAGSTFSEWD-----DPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYK 553 (721)
Q Consensus 479 ~TE~~~~~~~~~~~-----~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~ 553 (721)
+||++..++..... .....++|+|.++++++|+| +++..+ ++|+.|||+++|++++.||+++++.|.+.|.
T Consensus 295 ~tE~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d-~~~~~~---~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~ 370 (503)
T PRK04813 295 PTEATVAVTSIEITDEMLDQYKRLPIGYAKPDSPLLIID-EEGTKL---PDGEQGEIVISGPSVSKGYLNNPEKTAEAFF 370 (503)
T ss_pred cchheeEEEEEEecccccccCCCCcccccCCCCEEEEEC-CCCCCC---CCCCceEEEEeccccccccCCChhHhHHhhc
Confidence 99997654432211 12346899999999999999 566554 4788999999999999999999999998875
Q ss_pred cCCCCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcccceEEEEecCCC---ceEEEEEEcC
Q 004977 554 VDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYVDNIMIHADPFH---NYCVALVVPS 630 (721)
Q Consensus 554 ~~~~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~~a~vv~~ 630 (721)
. .+|.+||+|||+|++ ++|++++.||.||+||+ +|++|+|.+||+++.++|+|++++|++.++. +.++++|++.
T Consensus 371 ~-~~g~~~~~tGD~~~~-~~g~~~~~GR~~d~i~~-~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~ 447 (503)
T PRK04813 371 T-FDGQPAYHTGDAGYL-EDGLLFYQGRIDFQIKL-NGYRIELEEIEQNLRQSSYVESAVVVPYNKDHKVQYLIAYVVPK 447 (503)
T ss_pred c-CCCceeEECCceEEe-eCCeEEEeccccceEEE-CcEEeCHHHHHHHHHhCCCcceEEEEEeeCCCCccEEEEEEEec
Confidence 2 244579999999999 89999999999999997 6999999999999999999999999986643 4688998887
Q ss_pred hHHHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCCCCCCCCccCcccccChHHHHH
Q 004977 631 HKALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEPWTPEAGLVTAALKIKREQLKA 710 (721)
Q Consensus 631 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~~~p~~~~~t~~gKi~R~~l~~ 710 (721)
++... . ..++.++++++++ .+|+.|++|+.+++++++ | +|++||++|++|++
T Consensus 448 ~~~~~---------~------------~~~~~~~l~~~~~-~~l~~~~~P~~i~~~~~~--P----~t~~gKv~r~~l~~ 499 (503)
T PRK04813 448 EEDFE---------R------------EFELTKAIKKELK-ERLMEYMIPRKFIYRDSL--P----LTPNGKIDRKALIE 499 (503)
T ss_pred ccccc---------c------------cchhHHHHHHHHH-hhCccccCCeEEEEeccC--C----CCCCCCCcHHHHHH
Confidence 53210 0 1123467888888 889999999999999988 6 99999999999998
Q ss_pred HHH
Q 004977 711 KFK 713 (721)
Q Consensus 711 ~~~ 713 (721)
+++
T Consensus 500 ~~~ 502 (503)
T PRK04813 500 EVN 502 (503)
T ss_pred Hhc
Confidence 875
No 104
>PRK13391 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=6e-62 Score=546.93 Aligned_cols=494 Identities=20% Similarity=0.230 Sum_probs=393.9
Q ss_pred HHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEccCcHhH
Q 004977 89 EQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVEW 168 (721)
Q Consensus 89 ~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~ 168 (721)
...++++|+++|+++.. ++ +.+||+||.++++++|++|.+.|+++|++|+++++|++++
T Consensus 4 ~~~a~~~p~~~a~~~~~----------~~-----------~~~ty~~l~~~~~~la~~L~~~g~~~~~~V~v~~~~~~~~ 62 (511)
T PRK13391 4 GIHAQTTPDKPAVIMAS----------TG-----------EVVTYRELDERSNRLAHLFRSLGLKRGDHVAIFMENNLRY 62 (511)
T ss_pred hhhHhhCCCceEEEecC----------CC-----------CEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH
Confidence 46789999999997621 23 3699999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccchhHHHhhhhcCCCccEEEEecCCCCCccCCccCCCC
Q 004977 169 FIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEKDSGVSGGIS 248 (721)
Q Consensus 169 ~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~ 248 (721)
+++++||+++|++++|+++.++.+++.+++++++++.++++......+......++.....+..+.....
T Consensus 63 ~~~~~a~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 132 (511)
T PRK13391 63 LEVCWAAERSGLYYTCVNSHLTPAEAAYIVDDSGARALITSAAKLDVARALLKQCPGVRHRLVLDGDGEL---------- 132 (511)
T ss_pred HHHHHHHHHhccEEeccccccCHHHHHHHHhccCCcEEEEchhhHHHHHHHHhcCCCceEEEEecCCCCC----------
Confidence 9999999999999999999999999999999999999999988877666666666666555555432111
Q ss_pred CceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEeccCCCCCcchhee--ccHHHHHH---HHHHHhhCCCCCCCcEEEec
Q 004977 249 NWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMI--THGNIVAT---AAAIKTLIPNPGRSDVYLAY 323 (721)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~--sh~~l~~~---~~~~~~~~~~~~~~d~~l~~ 323 (721)
.....+++..... +. ....+.++.++++|||||||.||||++ +|.++... .......+ .+.+++++++.
T Consensus 133 -~~~~~~~~~~~~~---~~-~~~~~~~~~a~il~TSGtTG~PKgv~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~ 206 (511)
T PRK13391 133 -EGFVGYAEAVAGL---PA-TPIADESLGTDMLYSSGTTGRPKGIKRPLPEQPPDTPLPLTAFLQRLW-GFRSDMVYLSP 206 (511)
T ss_pred -cccccHHHHhcCC---CC-CCCCCcccccEEEECCCCCCCCCEEEEccccchhhhhhHHHHHHHHhc-CCCCCCeEEEc
Confidence 1122344433211 11 112244567999999999999999995 56665432 23334445 77889999999
Q ss_pred cChHHHHHHHHHHHHHHhcceEeeCc---cccccccchhhccCccCcceeecceEEeechHHHHHHHHHHHHHHHhhcch
Q 004977 324 LPLAHVLELAAESIMLCAGCAIGYGS---TLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKGGL 400 (721)
Q Consensus 324 ~pl~h~~g~~~~~~~l~~G~~~~~~~---~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~ 400 (721)
+|++|.+++...+.++..|+++++.+ +..+. ..++++++|++.++|+++..+.+......
T Consensus 207 ~p~~h~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-----------~~i~~~~~t~~~~~p~~~~~l~~~~~~~~------ 269 (511)
T PRK13391 207 APLYHSAPQRAVMLVIRLGGTVIVMEHFDAEQYL-----------ALIEEYGVTHTQLVPTMFSRMLKLPEEVR------ 269 (511)
T ss_pred CCHHHHHHHHHHHHHHHcCceEEECCCCCHHHHH-----------HHHHHhCCeEEEehHHHHHHHHhCchhhc------
Confidence 99999999887788899999998843 33333 33999999999999999988764211000
Q ss_pred hhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHHHHHHHhhCCccccccccc
Q 004977 401 TKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMGAPIGQAYGLT 480 (721)
Q Consensus 401 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~~~~~~g~~l~~~YG~T 480 (721)
.....+++|.+++||+++++++.+.+++.+|..+++.||+|
T Consensus 270 ---------------------------------------~~~~~~~l~~~~~gg~~~~~~~~~~~~~~~g~~v~~~YG~t 310 (511)
T PRK13391 270 ---------------------------------------DKYDLSSLEVAIHAAAPCPPQVKEQMIDWWGPIIHEYYAAT 310 (511)
T ss_pred ---------------------------------------ccCCccceeEEEEccCCCCHHHHHHHHHHcCCceeeeeccc
Confidence 00112589999999999999999999998899999999999
Q ss_pred cccccccccCCC-CCCCCccCCCcCcceEEEEecCCCCcccCCCCCCcceEEEccccccccccCCCcccccccccCCCCc
Q 004977 481 ETCAGSTFSEWD-DPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVDERGM 559 (721)
Q Consensus 481 E~~~~~~~~~~~-~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~~~g~ 559 (721)
|++.++...... ....+++|+|+++ +++|+| +++..+ +.|+.|||+++|+ ++.||+++++.+.+.|.. + .
T Consensus 311 E~~~~~~~~~~~~~~~~~~vG~~~~g-~~~i~d-~~~~~~---~~g~~Gel~~~g~-~~~gy~~~~~~~~~~~~~--~-~ 381 (511)
T PRK13391 311 EGLGFTACDSEEWLAHPGTVGRAMFG-DLHILD-DDGAEL---PPGEPGTIWFEGG-RPFEYLNDPAKTAEARHP--D-G 381 (511)
T ss_pred cccceEEecCccccccCCCcCCcccc-eEEEEC-CCCCCC---CCCCceEEEEecC-cceEEcCChhHhHHhhcc--C-C
Confidence 998765543322 2345799999999 699998 566543 4788999999999 899999999999998852 2 3
Q ss_pred ceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcccceEEEEecCCCc---eEEEEEEcChHHHHH
Q 004977 560 CWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYVDNIMIHADPFHN---YCVALVVPSHKALEK 636 (721)
Q Consensus 560 gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~~---~~~a~vv~~~~~~~~ 636 (721)
+||+|||+|+++++|.++|.||.||+||+ +|++|+|.+||++|.+||.|.+|+|++.++.. .+++++++.++.
T Consensus 382 ~w~~TGD~g~~~~~g~l~~~gR~~~~i~~-~G~~v~~~eie~~l~~~~~v~~~~v~~~~~~~~g~~~~~~~~~~~~~--- 457 (511)
T PRK13391 382 TWSTVGDIGYVDEDGYLYLTDRAAFMIIS-GGVNIYPQEAENLLITHPKVADAAVFGVPNEDLGEEVKAVVQPVDGV--- 457 (511)
T ss_pred CEEecCCEEEECCCccEEEeccCCCEEEe-CCEEECHHHHHHHHHhCCCcceEEEEecCCcccCceeEEEEEECCCC---
Confidence 89999999999999999999999999997 69999999999999999999999999987653 478888875421
Q ss_pred HHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCCCCCCCCccCcccccChHHHHHHHHH
Q 004977 637 WAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEPWTPEAGLVTAALKIKREQLKAKFKD 714 (721)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~~~p~~~~~t~~gKi~R~~l~~~~~~ 714 (721)
..+ +.+.++|+++++ .+|+.|++|..|.+++++ | +|++||++|+.|++.|..
T Consensus 458 -------~~~------------~~~~~~l~~~~~-~~l~~~~~P~~i~~~~~~--P----~t~~gKv~r~~l~~~~~~ 509 (511)
T PRK13391 458 -------DPG------------PALAAELIAFCR-QRLSRQKCPRSIDFEDEL--P----RLPTGKLYKRLLRDRYWG 509 (511)
T ss_pred -------Ccc------------cchHHHHHHHHH-hhcccCcCCcEEEEeecC--C----CCCccceeHHHHHHHhhc
Confidence 000 122367888888 899999999999999998 6 999999999999998864
No 105
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=9.8e-62 Score=551.28 Aligned_cols=515 Identities=23% Similarity=0.319 Sum_probs=397.3
Q ss_pred CCCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHh-CCCCCCCEEE
Q 004977 81 ASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVN-FGHNVDTRAA 159 (721)
Q Consensus 81 ~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~-~Gv~~gd~V~ 159 (721)
..++.++|+++++++|+++|+.. +++ .+||+||.++++++|..|.+ .|+++|++|+
T Consensus 22 ~~~l~~~l~~~a~~~p~~~a~~~------------~~~-----------~lTy~~l~~~~~~la~~L~~~~g~~~g~~V~ 78 (560)
T PRK08974 22 YQSLVDMFEQAVARYADQPAFIN------------MGE-----------VMTFRKLEERSRAFAAYLQNGLGLKKGDRVA 78 (560)
T ss_pred cccHHHHHHHHHHhCCCCceEEE------------CCc-----------cccHHHHHHHHHHHHHHHHHhcCCCCCCEEE
Confidence 46899999999999999999975 333 69999999999999999984 8999999999
Q ss_pred EEccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccchhHHHhhhhcCCCccEEEEecCCCCCc
Q 004977 160 ILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEK 239 (721)
Q Consensus 160 i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~ 239 (721)
++++|++++++++|||+++|++++|++|.++.+++.+++++++++.++++++..+.+..+.... ..+.++.........
T Consensus 79 i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 157 (560)
T PRK08974 79 LMMPNLLQYPIALFGILRAGMIVVNVNPLYTPRELEHQLNDSGAKAIVIVSNFAHTLEKVVFKT-PVKHVILTRMGDQLS 157 (560)
T ss_pred EECCCCHHHHHHHHHHHHcCcEEeccCccCCHHHHHHHHHhcCceEEEEeccccHHHHHHhhhc-CcceEEEeccccccc
Confidence 9999999999999999999999999999999999999999999999999887665555443322 233333221110000
Q ss_pred --cCCc--------cCC-C--CCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHHHHH
Q 004977 240 --DSGV--------SGG-I--SNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAA 306 (721)
Q Consensus 240 --~~~~--------~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~ 306 (721)
.... ... + ......++.+....+...........++++++|+|||||||.||+|+++|+++...+..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~ 237 (560)
T PRK08974 158 TAKGTLVNFVVKYIKRLVPKYHLPDAISFRSALHKGRRMQYVKPELVPEDLAFLQYTGGTTGVAKGAMLTHRNMLANLEQ 237 (560)
T ss_pred ccccccccchhhhcccccccccCCCcccHHHHhhccCCCCCCCCCCCCCCeEEEEECCCCCCCCcEEEEchHHHHHHHHH
Confidence 0000 000 0 00011222333322222111122346789999999999999999999999999887765
Q ss_pred HHhhCC--CCCCCcEEEeccChHHHHHHHH-HHHHHHhcceEeeC-ccccccccchhhccCccCcceeecceEEeechHH
Q 004977 307 IKTLIP--NPGRSDVYLAYLPLAHVLELAA-ESIMLCAGCAIGYG-STLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAI 382 (721)
Q Consensus 307 ~~~~~~--~~~~~d~~l~~~pl~h~~g~~~-~~~~l~~G~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~ 382 (721)
....+. ....++.++..+|++|.+++.. .+.++..|+++++. ++... ..++..++++++|++.++|++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~--------~~~~~~i~~~~~t~~~~~p~~ 309 (560)
T PRK08974 238 AKAAYGPLLHPGKELVVTALPLYHIFALTVNCLLFIELGGQNLLITNPRDI--------PGFVKELKKYPFTAITGVNTL 309 (560)
T ss_pred HHHhhccccCCCccEEEEeCcHHHHHHHHHHHHHHhhcCCeEEEecCccCH--------HHHHHHHHhcCcceEcCcHHH
Confidence 544331 2344678889999999998755 56668888887763 22111 112333899999999999999
Q ss_pred HHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHH
Q 004977 383 FDRVREGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQ 462 (721)
Q Consensus 383 ~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~ 462 (721)
++.+.+.... .....+++|.+++||+++++.+.
T Consensus 310 ~~~l~~~~~~-----------------------------------------------~~~~~~~lr~~~~gg~~~~~~~~ 342 (560)
T PRK08974 310 FNALLNNEEF-----------------------------------------------QELDFSSLKLSVGGGMAVQQAVA 342 (560)
T ss_pred HHHHHhCcCc-----------------------------------------------ccCCccceeEEEecCccCCHHHH
Confidence 9988652100 00112489999999999999999
Q ss_pred HHHHHhhCCccccccccccccccccccCCCC-CCCCccCCCcCcceEEEEecCCCCcccCCCCCCcceEEEccccccccc
Q 004977 463 RFINICMGAPIGQAYGLTETCAGSTFSEWDD-PSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGY 541 (721)
Q Consensus 463 ~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~~-~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY 541 (721)
+.|++.+|+++++.||+||++..++...... ...+++|.|+|+++++|+| +++..+ +.|+.|||+++|+.++.||
T Consensus 343 ~~~~~~~g~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~-~~~~~~---~~g~~Gel~v~g~~~~~gy 418 (560)
T PRK08974 343 ERWVKLTGQYLLEGYGLTECSPLVSVNPYDLDYYSGSIGLPVPSTEIKLVD-DDGNEV---PPGEPGELWVKGPQVMLGY 418 (560)
T ss_pred HHHHHHhCCcEEeeecccccCceeeccCCCCcccCCccccCcCCCEEEEEC-CCCCCC---CCCCceEEEEecCCcchhh
Confidence 9999888999999999999987766544322 2357899999999999999 556543 4789999999999999999
Q ss_pred cCCCcccccccccCCCCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcccceEEEEecCCCc
Q 004977 542 FNNPGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYVDNIMIHADPFHN 621 (721)
Q Consensus 542 ~~~~~~t~~~f~~~~~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~~ 621 (721)
+++++.+.+.| .+ |||+|||+|+++++|+++|+||.+|+|++ +|++|+|.+||++|.+||+|.+++|++.+++.
T Consensus 419 ~~~~~~~~~~~---~~--g~~~TGDl~~~~~~g~l~i~GR~~d~i~~-~G~~i~~~~IE~~l~~~~~v~~~~v~~~~~~~ 492 (560)
T PRK08974 419 WQRPEATDEVI---KD--GWLATGDIAVMDEEGFLRIVDRKKDMILV-SGFNVYPNEIEDVVMLHPKVLEVAAVGVPSEV 492 (560)
T ss_pred cCChhhhhhhh---hc--CCcccCCEEEEcCCceEEEEecccceEEe-CCEEECHHHHHHHHHhCCCeeEEEEEeeecCC
Confidence 99999999888 66 89999999999999999999999999998 59999999999999999999999999987653
Q ss_pred ---eEEEEEEcChHHHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCCCCCCCCccC
Q 004977 622 ---YCVALVVPSHKALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEPWTPEAGLVT 698 (721)
Q Consensus 622 ---~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~~~p~~~~~t 698 (721)
.++++|+..... .. .++++++++ .+|+.|++|..+++++++ | +|
T Consensus 493 ~g~~~~~~v~~~~~~---------~~-----------------~~~l~~~l~-~~l~~~~~P~~~~~~~~l--P----~t 539 (560)
T PRK08974 493 SGEAVKIFVVKKDPS---------LT-----------------EEELITHCR-RHLTGYKVPKLVEFRDEL--P----KS 539 (560)
T ss_pred cceEEEEEEECCCCC---------CC-----------------HHHHHHHHH-hhcccccCCcEEEEhhhC--C----CC
Confidence 356666544211 00 156777887 889999999999999988 6 99
Q ss_pred cccccChHHHHHHHHHHHH
Q 004977 699 AALKIKREQLKAKFKDDLQ 717 (721)
Q Consensus 699 ~~gKi~R~~l~~~~~~~i~ 717 (721)
++||++|+.|++...++.+
T Consensus 540 ~~GK~~r~~l~~~~~~~~~ 558 (560)
T PRK08974 540 NVGKILRRELRDEARAKVD 558 (560)
T ss_pred CCCcEeHHHHHHHHHhhhc
Confidence 9999999999999887765
No 106
>PRK07798 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.8e-61 Score=546.80 Aligned_cols=507 Identities=20% Similarity=0.235 Sum_probs=399.3
Q ss_pred CCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEE
Q 004977 82 STMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAIL 161 (721)
Q Consensus 82 ~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~ 161 (721)
-|+.++|+++++++|+++|+.+ +++ .+||+||.++++++|+.|.+.|+++||+|+|+
T Consensus 3 ~~l~~~~~~~a~~~p~~~a~~~------------~~~-----------~~ty~el~~~~~~la~~L~~~g~~~~~~v~v~ 59 (533)
T PRK07798 3 WNIADLFEAVADAVPDRVALVC------------GDR-----------RLTYAELEERANRLAHYLIAQGLGPGDHVGIY 59 (533)
T ss_pred ccHHHHHHHHHHhCCCceEEEE------------CCc-----------eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEE
Confidence 3799999999999999999986 333 69999999999999999999999999999999
Q ss_pred ccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccchhHHHhhhhcCCCccEEEEecCCCCCccC
Q 004977 162 AETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEKDS 241 (721)
Q Consensus 162 ~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~ 241 (721)
++|+++|+++++||+++|++++|+++.++.+++.++++++++++++++......+.++...++.++.++.++......
T Consensus 60 ~~n~~~~~~~~~a~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 137 (533)
T PRK07798 60 ARNRIEYVEAMLGAFKARAVPVNVNYRYVEDELRYLLDDSDAVALVYEREFAPRVAEVLPRLPKLRTLVVVEDGSGND-- 137 (533)
T ss_pred cCCCHHHHHHHHHHHhcCeEEEecCcCCCHHHHHHHHhhcCCCEEEEchhhHHHHHHHhccCCCccEEEEecCCcccc--
Confidence 999999999999999999999999999999999999999999999999888777777766677777777766432211
Q ss_pred CccCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHHHHHHHhhC--------CC
Q 004977 242 GVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLI--------PN 313 (721)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~--------~~ 313 (721)
......+++++........ ... ...+|.++|+|||||||.||+|+++|+++...+......+ ..
T Consensus 138 ------~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (533)
T PRK07798 138 ------LLPGAVDYEDALAAGSPER-DFG-ERSPDDLYLLYTGGTTGMPKGVMWRQEDIFRVLLGGRDFATGEPIEDEEE 209 (533)
T ss_pred ------cCCccccHHHHHhccCCcC-CCC-CCCCCceEEEECCCCCCCCcEEEEecHHHHHHHhhhhhhhcccchhhhhh
Confidence 0012456777665433221 111 2234457999999999999999999999987655432211 01
Q ss_pred C------CCCcEEEeccChHHHHHHHHHHHHHHhcceEeeCccccccccchhhccCccCcceeecceEEeechHHHHH-H
Q 004977 314 P------GRSDVYLAYLPLAHVLELAAESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDR-V 386 (721)
Q Consensus 314 ~------~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~-l 386 (721)
+ ..+++++..+|++|..+++..+.++..|+++++.+.. ..+ +..++..++++++|.+.++|..+.. +
T Consensus 210 ~~~~~~~~~~~~~~~~~pl~~~~~~~~~~~~l~~G~~~~~~~~~-~~~-----~~~~~~~i~~~~~t~~~~~~~~~~~~l 283 (533)
T PRK07798 210 LAKRAAAGPGMRRFPAPPLMHGAGQWAAFAALFSGQTVVLLPDV-RFD-----ADEVWRTIEREKVNVITIVGDAMARPL 283 (533)
T ss_pred hcccccCCCCceEEEecchhhhhhHHHHHHHHhcCceEEEecCC-CcC-----HHHHHHHHHHhCCeEEEechHHHHHHH
Confidence 1 5678999999999999998888999999999996522 111 2234444899999999999877654 3
Q ss_pred HHHHHHHHHhhcchhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHHHHHH
Q 004977 387 REGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFIN 466 (721)
Q Consensus 387 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~~~ 466 (721)
..... . ......+++|.+++||+++++++.+++.
T Consensus 284 ~~~~~-~---------------------------------------------~~~~~~~~l~~i~~gG~~~~~~~~~~~~ 317 (533)
T PRK07798 284 LDALE-A---------------------------------------------RGPYDLSSLFAIASGGALFSPSVKEALL 317 (533)
T ss_pred HHHhc-c---------------------------------------------cccCCCCceEEEEECCCCCCHHHHHHHH
Confidence 22111 0 0011225899999999999999999998
Q ss_pred Hhh-CCccccccccccccccccccCCCCCCCCccC--CCcCcceEEEEecCCCCcccCCCCCCc--ceEEEccccccccc
Q 004977 467 ICM-GAPIGQAYGLTETCAGSTFSEWDDPSVGRVG--PPVPCCYIKLVSWDEGGYKTSDKPMPR--GEIVVGGFNVTAGY 541 (721)
Q Consensus 467 ~~~-g~~l~~~YG~TE~~~~~~~~~~~~~~~~~vG--~p~p~~~v~i~d~~~~~~~~~~~~g~~--GEl~v~g~~v~~gY 541 (721)
+.+ +..+++.||+||++.+........ ....| ++.++..++|+| +++..+ ++|+. |+|+ +++.++.||
T Consensus 318 ~~~~~~~~~~~YG~tE~~~~~~~~~~~~--~~~~g~~~~~~~~~~~i~~-~~~~~~---~~g~~~~g~l~-~~~~~~~gy 390 (533)
T PRK07798 318 ELLPNVVLTDSIGSSETGFGGSGTVAKG--AVHTGGPRFTIGPRTVVLD-EDGNPV---EPGSGEIGWIA-RRGHIPLGY 390 (533)
T ss_pred HHcCCCeEEeeecccccccccccCCCCC--CccCCCCccCCCceEEEEC-CCCCCC---CCCCCCeeEEE-eecCccccc
Confidence 877 789999999999976554332211 12334 788999999999 556544 35665 6665 566899999
Q ss_pred cCCCcccccccccCCCCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcccceEEEEecCCC-
Q 004977 542 FNNPGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYVDNIMIHADPFH- 620 (721)
Q Consensus 542 ~~~~~~t~~~f~~~~~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~- 620 (721)
+++++.|++.|.. .++.+||+|||+|++|+||+|++.||.||+||. +|++|+|.+||+++.++|.|.+++|++.++.
T Consensus 391 ~~~~~~t~~~f~~-~~~~~~~~TGD~~~~~~~g~l~~~GR~~~~i~~-~G~~v~~~eIE~~l~~~~~v~~~~v~~~~~~~ 468 (533)
T PRK07798 391 YKDPEKTAETFPT-IDGVRYAIPGDRARVEADGTITLLGRGSVCINT-GGEKVFPEEVEEALKAHPDVADALVVGVPDER 468 (533)
T ss_pred cCChhhhHHhhcc-CCCCceEEcCcEEEEcCCCcEEEEccccceEec-CCEEeCHHHHHHHHHhCccceeEEEEeccCcc
Confidence 9999999999853 244579999999999999999999999999996 6999999999999999999999999998765
Q ss_pred --ceEEEEEEcChHHHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCCCCCCCCccC
Q 004977 621 --NYCVALVVPSHKALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEPWTPEAGLVT 698 (721)
Q Consensus 621 --~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~~~p~~~~~t 698 (721)
+.++++|++.++. .. ..++|+++++ .+|+.|++|+.+++++++ | +|
T Consensus 469 ~~~~~~~~v~~~~~~----------~~---------------~~~~l~~~l~-~~l~~~~~P~~i~~~~~i--P----~t 516 (533)
T PRK07798 469 WGQEVVAVVQLREGA----------RP---------------DLAELRAHCR-SSLAGYKVPRAIWFVDEV--Q----RS 516 (533)
T ss_pred cCceEEEEEEECCCC----------CC---------------CHHHHHHHHh-hhcccCCCCeEEEEcccC--C----CC
Confidence 3588888876432 00 0267888887 889999999999999988 6 99
Q ss_pred cccccChHHHHHHHHH
Q 004977 699 AALKIKREQLKAKFKD 714 (721)
Q Consensus 699 ~~gKi~R~~l~~~~~~ 714 (721)
++||++|+.|+++.++
T Consensus 517 ~~GK~~~~~~~~~~~~ 532 (533)
T PRK07798 517 PAGKADYRWAKEQAAE 532 (533)
T ss_pred CcchhhHHHHhhhhcc
Confidence 9999999999998765
No 107
>PRK08162 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.4e-61 Score=546.71 Aligned_cols=505 Identities=22% Similarity=0.230 Sum_probs=388.2
Q ss_pred CCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEE
Q 004977 82 STMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAIL 161 (721)
Q Consensus 82 ~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~ 161 (721)
.|+.+.|++.++.+|+++|+.+ ++. .+||+||.++++++|.+|.+.|+++||+|+|+
T Consensus 18 ~~~~~~~~~~~~~~~~~~a~~~------------~~~-----------~~ty~~L~~~~~~~a~~L~~~g~~~g~~v~i~ 74 (545)
T PRK08162 18 LTPLSFLERAAEVYPDRPAVIH------------GDR-----------RRTWAETYARCRRLASALARRGIGRGDTVAVL 74 (545)
T ss_pred CCHHHHHHHHHHHCCCCeEEEE------------CCe-----------EEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEE
Confidence 6889999999999999999975 332 69999999999999999999999999999999
Q ss_pred ccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccchhHHHhhhhcCCCccEEEEecCCCCCccC
Q 004977 162 AETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEKDS 241 (721)
Q Consensus 162 ~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~ 241 (721)
++|+++++++++||+++|++++|+++.++.+++.+++++++++.++++.+....+.+.....+..+.++ ++......
T Consensus 75 ~~~~~~~~~~~lA~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-- 151 (545)
T PRK08162 75 LPNIPAMVEAHFGVPMAGAVLNTLNTRLDAASIAFMLRHGEAKVLIVDTEFAEVAREALALLPGPKPLV-IDVDDPEY-- 151 (545)
T ss_pred CCCchHHHHHHHHHHHhCcEEeccccccChHHHHHHHHhCCCeEEEEccchhhHHHHHHhhCCCCceEE-EecCcccc--
Confidence 999999999999999999999999999999999999999999999999988777666554444332222 22111000
Q ss_pred CccCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHHHHHHHhhCCCCCCCcEEE
Q 004977 242 GVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNPGRSDVYL 321 (721)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~d~~l 321 (721)
.....+...+++++..............+.+++++|+|||||||.||||+++|+++..........+ .+..+++++
T Consensus 152 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~t~~~~~~~~~~~~~~~-~~~~~~~~l 227 (545)
T PRK08162 152 ---PGGRFIGALDYEAFLASGDPDFAWTLPADEWDAIALNYTSGTTGNPKGVVYHHRGAYLNALSNILAW-GMPKHPVYL 227 (545)
T ss_pred ---ccCCCcccccHHHHhccCCccccccCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhc-CCCCCCeeE
Confidence 0001123345666654322211111223456899999999999999999999999877766665556 788889999
Q ss_pred eccChHHHHHHHHHHHHHHhcceEee---CccccccccchhhccCccCcceeecceEEeechHHHHHHHHHHHHHHHhhc
Q 004977 322 AYLPLAHVLELAAESIMLCAGCAIGY---GSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKG 398 (721)
Q Consensus 322 ~~~pl~h~~g~~~~~~~l~~G~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~ 398 (721)
+.+|++|.+++...+...+.|++.++ .++..+. ..++++++|++.++|++++.|++.......
T Consensus 228 ~~~pl~h~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----------~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~--- 293 (545)
T PRK08162 228 WTLPMFHCNGWCFPWTVAARAGTNVCLRKVDPKLIF-----------DLIREHGVTHYCGAPIVLSALINAPAEWRA--- 293 (545)
T ss_pred eccCcHhhhhHHHHHHHHHHccEEEEeCCCCHHHHH-----------HHHHHcCCeEEEechHHHHHHHhCcccccc---
Confidence 99999999998765444445555444 2333333 339999999999999999998753110000
Q ss_pred chhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHHHHHHHhhCCccccccc
Q 004977 399 GLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMGAPIGQAYG 478 (721)
Q Consensus 399 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~~~~~~g~~l~~~YG 478 (721)
...+.+.++++|+++++++.+.++. .++++++.||
T Consensus 294 --------------------------------------------~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~YG 328 (545)
T PRK08162 294 --------------------------------------------GIDHPVHAMVAGAAPPAAVIAKMEE-IGFDLTHVYG 328 (545)
T ss_pred --------------------------------------------CCccceEEEECCCCCCHHHHHHHHH-hCCceeeccc
Confidence 0024556788999999999988876 4899999999
Q ss_pred cccccccccccCCC-----------CCCCCccCCCcCc-ceEEEEecCCCCcccCCCCC-CcceEEEccccccccccCCC
Q 004977 479 LTETCAGSTFSEWD-----------DPSVGRVGPPVPC-CYIKLVSWDEGGYKTSDKPM-PRGEIVVGGFNVTAGYFNNP 545 (721)
Q Consensus 479 ~TE~~~~~~~~~~~-----------~~~~~~vG~p~p~-~~v~i~d~~~~~~~~~~~~g-~~GEl~v~g~~v~~gY~~~~ 545 (721)
+||+++.++..... ....+++|.+.+. ..++|+|++++..++ ..| +.|||+|+|+.++.||++++
T Consensus 329 ~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~--~~g~~~Gel~v~g~~~~~gY~~~~ 406 (545)
T PRK08162 329 LTETYGPATVCAWQPEWDALPLDERAQLKARQGVRYPLQEGVTVLDPDTMQPVP--ADGETIGEIMFRGNIVMKGYLKNP 406 (545)
T ss_pred ccccCcceeecccccccccCCccchhhccCCCCcccCCcceEEEEcCCCCcccC--CCCCceeEEEEecCcchhhhcCCh
Confidence 99986544432111 0112456776653 468888865555443 123 46999999999999999999
Q ss_pred cccccccccCCCCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcccceEEEEecCCC---ce
Q 004977 546 GKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYVDNIMIHADPFH---NY 622 (721)
Q Consensus 546 ~~t~~~f~~~~~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~ 622 (721)
+.|.+.| .+ |||+|||+|++|+||+++|+||.||+||+ +|++|+|.+||++|.+||+|.+++|++.++. +.
T Consensus 407 ~~~~~~~---~~--g~~~TGDl~~~d~dg~l~~~GR~~~~i~~-~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~~~~ 480 (545)
T PRK08162 407 KATEEAF---AG--GWFHTGDLAVLHPDGYIKIKDRSKDIIIS-GGENISSIEVEDVLYRHPAVLVAAVVAKPDPKWGEV 480 (545)
T ss_pred hhhHHHh---hC--CCcccCceEEEcCCccEEEEecccceEEe-CCEEECHHHHHHHHHhCCcccEEEEEeeeccccCce
Confidence 9999998 66 89999999999999999999999999996 6999999999999999999999999998754 35
Q ss_pred EEEEEEcChHHHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCCCCCCCCccCcccc
Q 004977 623 CVALVVPSHKALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEPWTPEAGLVTAALK 702 (721)
Q Consensus 623 ~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~~~p~~~~~t~~gK 702 (721)
++++|++.++. .. ..++|+++++ ++|++|++|..+++. ++ | +|++||
T Consensus 481 ~~~~v~~~~~~----------~~---------------~~~~l~~~~~-~~l~~~~~P~~~~~~-~i--P----~t~~gK 527 (545)
T PRK08162 481 PCAFVELKDGA----------SA---------------TEEEIIAHCR-EHLAGFKVPKAVVFG-EL--P----KTSTGK 527 (545)
T ss_pred EEEEEEeCCCC----------CC---------------CHHHHHHHHH-HhcccccCCcEEEec-cc--C----CCCCcC
Confidence 88888876532 00 0267888888 899999999999764 44 5 999999
Q ss_pred cChHHHHHHHHHHH
Q 004977 703 IKREQLKAKFKDDL 716 (721)
Q Consensus 703 i~R~~l~~~~~~~i 716 (721)
++|+.|++++++.-
T Consensus 528 ~~r~~l~~~~~~l~ 541 (545)
T PRK08162 528 IQKFVLREQAKSLK 541 (545)
T ss_pred CcHHHHHHHHhhhh
Confidence 99999999876543
No 108
>PRK09192 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.7e-62 Score=556.23 Aligned_cols=506 Identities=21% Similarity=0.271 Sum_probs=380.8
Q ss_pred ccccCCCCCCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhCCCC
Q 004977 74 VEVPWKGASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHN 153 (721)
Q Consensus 74 ~~~~~~~~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~ 153 (721)
.+.++++..|+.++|+..++++|+..++.. +++ .++.+||+||+.+++++|++|.++|++
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~--------~~~~~Ty~eL~~~~~~~a~~L~~~gi~ 72 (579)
T PRK09192 13 LPRRYADFPTLVEALDYAALGEAGMNFYDR------------RGQ--------LEEALPYQTLRARAEAGARRLLALGLK 72 (579)
T ss_pred ccccccchhhHHHHHHHhhccCCceEEEec------------CCC--------EEEEecHHHHHHHHHHHHHHHHHhCCC
Confidence 345567778999999999999887665421 221 235799999999999999999999999
Q ss_pred CCCEEEEEccCcHhHHHHHHHHHhcCCEEEEecCCCC-------HHHHHHHHHhcCceEEEECccchhHHHhhhhcCCCc
Q 004977 154 VDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSSLG-------EDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTI 226 (721)
Q Consensus 154 ~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~-------~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~ 226 (721)
+||+|+++++|+++|+++++||+++|++++|+++..+ .+++.++++.++++++|+++...+.+.......+.
T Consensus 73 ~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~~~~l~~~i~~~~~~~il~~~~~~~~~~~~~~~~~~- 151 (579)
T PRK09192 73 PGDRVALIAETDGDFVEAFFACQYAGLVPVPLPLPMGFGGRESYIAQLRGMLASAQPAAIITPDELLPWVNEATHGNPL- 151 (579)
T ss_pred CCCEEEEEcCCchhHHHHHHHHHHcCCeeEeccCCcccccchHHHHHHHHHHHhcCCCEEEeChHHHHHHHHhhccccc-
Confidence 9999999999999999999999999999999987543 68999999999999999998876665544322111
Q ss_pred cEEEEecCCCCCccCCccCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHHHHH
Q 004977 227 KNVIYFENDGSEKDSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAA 306 (721)
Q Consensus 227 ~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~ 306 (721)
+ ...++.++...... ........++++++|+|||||||.||||+++|++++..+..
T Consensus 152 --~---------------------~~~~~~~~~~~~~~-~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~ 207 (579)
T PRK09192 152 --L---------------------HVLSHAWFKALPEA-DVALPRPTPDDIAYLQYSSGSTRFPRGVIITHRALMANLRA 207 (579)
T ss_pred --c---------------------ceeehhhhcccCCC-ccccCCCCCCCeEEEEecCCCCCCCceEEeeHHHHHHHHHH
Confidence 1 11222332221111 11112346789999999999999999999999999998887
Q ss_pred HHh-hCCCCCCCcEEEeccChHHHHHHHH-HHHHHHhcceEeeCccccccccchhhccCccCcceeecceEEeechHHHH
Q 004977 307 IKT-LIPNPGRSDVYLAYLPLAHVLELAA-ESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFD 384 (721)
Q Consensus 307 ~~~-~~~~~~~~d~~l~~~pl~h~~g~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~ 384 (721)
... .+ ++.++|++++++|++|++++.. ++.++..|+++++.....+... +..++..+.++++|+++..|.++.
T Consensus 208 ~~~~~~-~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~----~~~~~~~i~~~~~t~~~~~~~~~~ 282 (579)
T PRK09192 208 ISHDGL-KVRPGDRCVSWLPFYHDMGLVGFLLTPVATQLSVDYLPTRDFARR----PLQWLDLISRNRGTISYSPPFGYE 282 (579)
T ss_pred HHhhcc-cCCCCCeEEEeCCCCCcchhHHHHHHHHHhCCeeEeeCHHHHHHC----HHHHHHHHHhcCcEEEeCCcHHHH
Confidence 777 66 8899999999999999999876 5566888998876432221111 122333388999998776555555
Q ss_pred HHHHHHHHHHHhhcchhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHHHH
Q 004977 385 RVREGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRF 464 (721)
Q Consensus 385 ~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~ 464 (721)
.+....... ..+....+++|.+++||+++++++.+.
T Consensus 283 l~~~~~~~~--------------------------------------------~~~~~~l~~lr~~~~gG~~l~~~~~~~ 318 (579)
T PRK09192 283 LCARRVNSK--------------------------------------------DLAELDLSCWRVAGIGADMIRPDVLHQ 318 (579)
T ss_pred HHHHhhccc--------------------------------------------cccccchhhhheeEecCccCCHHHHHH
Confidence 443211000 000111258999999999999999888
Q ss_pred HHHhhC------CccccccccccccccccccCCCCC----------------------------CCCccCCCcCcceEEE
Q 004977 465 INICMG------APIGQAYGLTETCAGSTFSEWDDP----------------------------SVGRVGPPVPCCYIKL 510 (721)
Q Consensus 465 ~~~~~g------~~l~~~YG~TE~~~~~~~~~~~~~----------------------------~~~~vG~p~p~~~v~i 510 (721)
+.+.++ ..+++.||+||++..++....... ..+++|+|+|+++++|
T Consensus 319 ~~~~~~~~g~~~~~~~~~yG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~p~~~v~i 398 (579)
T PRK09192 319 FAEAFAPAGFDDKAFMPSYGLAEATLAVSFSPLGSGIVVEEVDRDRLEYQGKAVAPGAETRRVRTFVNCGKALPGHEIEI 398 (579)
T ss_pred HHHHHHhcCCChhhcccccccccceeEEeccCCCCCceEEEEcHHHhcCCceeeccCCCCccceeEeecCCcCCCcEEEE
Confidence 877663 348999999999876654332110 1257999999999999
Q ss_pred EecCCCCcccCCCCCCcceEEEccccccccccCCCcccccccccCCCCcceEeeCcEEEEccCCeEEEEecCCCeEEcCC
Q 004977 511 VSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQH 590 (721)
Q Consensus 511 ~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~~~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~ 590 (721)
+| +++..+ +.|+.|||+++|++++.|||++ +.+.+.+. .+ +||+|||+|++ ++|+|+|+||+||+||+ +
T Consensus 399 ~d-~~~~~~---~~g~~Gel~i~g~~~~~gY~~~-~~~~~~~~--~d--gw~~TGDlg~~-~~G~l~~~GR~dd~i~~-~ 467 (579)
T PRK09192 399 RN-EAGMPL---PERVVGHICVRGPSLMSGYFRD-EESQDVLA--AD--GWLDTGDLGYL-LDGYLYITGRAKDLIII-N 467 (579)
T ss_pred EC-CCCCCC---CCCCEEEEEecCCchhhhhcCC-cccccccc--CC--ceeeccceeeE-ECCEEEEEeccccEEEE-C
Confidence 99 555544 4788999999999999999999 66777765 56 89999999999 89999999999999998 6
Q ss_pred eeeeechHHHHHHhcCcccc--eEEEEecCCC--ceEEEEEEcChHHHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHH
Q 004977 591 GEYISLGKVEAALISSDYVD--NIMIHADPFH--NYCVALVVPSHKALEKWAHEASIKYEDLSELCNKAEAVNEVQQALS 666 (721)
Q Consensus 591 G~~v~p~eIE~~l~~~p~V~--~~~V~g~~~~--~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 666 (721)
|++|+|.|||++|.+||+|. +|+|++.+++ ..++++|++.+... .. .++|+
T Consensus 468 G~~v~p~eIE~~l~~~p~V~~~~~~v~~~~~~~~~~~~~~v~~~~~~~---------------------~~----~~~l~ 522 (579)
T PRK09192 468 GRNIWPQDIEWIAEQEPELRSGDAAAFSIAQENGEKIVLLVQCRISDE---------------------ER----RGQLI 522 (579)
T ss_pred CCccCHHHHHHHHHhcCCccCCcEEEEEeccCCCeeEEEEEEecCCCh---------------------HH----HHHHH
Confidence 99999999999999999998 8999987765 35777777643210 01 13444
Q ss_pred HHHHHCCC-CCcccccEEEeeC--CCCCCCCCccCcccccChHHHHHHHHHHH
Q 004977 667 KVAKAAKL-DKFEIPAKIKLMP--EPWTPEAGLVTAALKIKREQLKAKFKDDL 716 (721)
Q Consensus 667 ~~~~~~~L-~~~~~P~~i~~~~--~~~~p~~~~~t~~gKi~R~~l~~~~~~~i 716 (721)
+.++ ..+ +.|++|..+++++ .+ | +|++||++|++|++.|.+..
T Consensus 523 ~~~~-~~l~~~~~~~~~i~~~~~~~l--P----~t~~GKv~R~~l~~~~~~~~ 568 (579)
T PRK09192 523 HALA-ALVRSEFGVEAAVELVPPHSL--P----RTSSGKLSRAKAKKRYLSGA 568 (579)
T ss_pred HHHH-HHHHHHhCCCceEEEeCCCCc--C----CCCCcchhHHHHHHHHHcCC
Confidence 4444 333 3577888888886 34 6 99999999999999987643
No 109
>PLN03051 acyl-activating enzyme; Provisional
Probab=100.00 E-value=4e-62 Score=545.41 Aligned_cols=463 Identities=17% Similarity=0.156 Sum_probs=337.2
Q ss_pred ccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccc------hhHHHhhhhcCCCccEEEEecCC
Q 004977 162 AETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQ------LKKLSAVSSSLKTIKNVIYFEND 235 (721)
Q Consensus 162 ~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~------~~~~~~~~~~~~~~~~ii~~~~~ 235 (721)
++|++|+++++|||+++|+++||+|+.++.+++.++|++++++++|+++.. .+.+..+....+ .+.++.....
T Consensus 1 ~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~el~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~ 79 (499)
T PLN03051 1 MPMTVDAVIIYLAIVLAGCVVVSVADSFSAKEIATRLDISGAKGVFTQDVVLRGGRALPLYSKVVEAAP-AKAIVLPAAG 79 (499)
T ss_pred CCCcHHHHHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEecCceeeCCeeecchhhhhhccc-ceEEEEeccC
Confidence 589999999999999999999999999999999999999999999998642 122222222222 2233322111
Q ss_pred CCCccCCccCCCCCceEeeHHHHHhcCCC------CCCCCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHHHHHHHh
Q 004977 236 GSEKDSGVSGGISNWTVSSFSEVEKLGKR------SPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKT 309 (721)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~ 309 (721)
.... ........+++++...... ....+....++|+++|+|||||||.||||++||+|++........
T Consensus 80 ~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~~ 153 (499)
T PLN03051 80 EPVA------VPLREQDLSWCDFLGVAAAQGSVGGNEYSPVYAPVESVTNILFSSGTTGEPKAIPWTHLSPLRCASDGWA 153 (499)
T ss_pred cccC------CccccCcccHHHHHhhhccccccccccCCcccCCccceEEEEeCCCCCCCCceEEEccchHHHHHHHHHH
Confidence 0000 0000012346665432111 011112235689999999999999999999999998877665555
Q ss_pred hCCCCCCCcEEEeccChHHHHHHHHHHHHHHhcceEeeCccccccccchhhccCccCcceeecceEEeechHHHHHHHHH
Q 004977 310 LIPNPGRSDVYLAYLPLAHVLELAAESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREG 389 (721)
Q Consensus 310 ~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~ 389 (721)
.+ ++.++|++++.+|++|.+++...+.+|+.|+++++.+... + ...++..|+++++|++.++|+++..|.+.
T Consensus 154 ~~-~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~t~v~~~~~~--~-----~~~~~~~i~~~~vt~~~~vP~~~~~l~~~ 225 (499)
T PLN03051 154 HM-DIQPGDVVCWPTNLGWMMGPWLLYSAFLNGATLALYGGAP--L-----GRGFGKFVQDAGVTVLGLVPSIVKAWRHT 225 (499)
T ss_pred hc-CCCCCCEEEEccCcceeeehHHHHHHHHcCCEEEecCCCC--C-----cHHHHHHHHHhCCcEEEeCHHHHHHHHhc
Confidence 66 7889999999999999999877778899999998853210 0 11233449999999999999999988652
Q ss_pred HHHHHHhhcchhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHHHHHHHhh
Q 004977 390 VVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICM 469 (721)
Q Consensus 390 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~~~~~~ 469 (721)
..... .....++||.+++||+++++++.+++++.+
T Consensus 226 ~~~~~---------------------------------------------~~~~~~~Lr~i~~gG~~~~~~~~~~~~~~~ 260 (499)
T PLN03051 226 GAFAM---------------------------------------------EGLDWSKLRVFASTGEASAVDDVLWLSSVR 260 (499)
T ss_pred Ccccc---------------------------------------------ccCCchhheEEEecCCCCCHHHHHHHHHhc
Confidence 10000 001124899999999999999988777633
Q ss_pred --CCccccccccccccccccccC-CCCCCCCccCCCcCcceEEEEecCCCCcccCCCCC--CcceEEEccccc--ccccc
Q 004977 470 --GAPIGQAYGLTETCAGSTFSE-WDDPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPM--PRGEIVVGGFNV--TAGYF 542 (721)
Q Consensus 470 --g~~l~~~YG~TE~~~~~~~~~-~~~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g--~~GEl~v~g~~v--~~gY~ 542 (721)
+++++++||+||++...+... ......+++|+|.++++++|+| ++++.++ +| +.|||+|+||.+ +.|||
T Consensus 261 ~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~G~p~~~~~~~ivd-~~g~~~~---~g~~~~Gel~v~g~~~~~~~gy~ 336 (499)
T PLN03051 261 GYYKPVIEYCGGTELASGYISSTLLQPQAPGAFSTASLGTRFVLLN-DNGVPYP---DDQPCVGEVALAPPMLGASDRLL 336 (499)
T ss_pred cccceeEeeeccccccceeecccccCCCCCccccCCCCCceEEEEC-CCCCCCC---CCCCcceEEEEecCcCCCCcccc
Confidence 478999999999875433222 1223457999999999999999 6666554 45 589999999976 58999
Q ss_pred CCCcccccccccC----CCCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhc-CcccceEEEEec
Q 004977 543 NNPGKTSEVYKVD----ERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALIS-SDYVDNIMIHAD 617 (721)
Q Consensus 543 ~~~~~t~~~f~~~----~~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~-~p~V~~~~V~g~ 617 (721)
|++ .++..+... ..+.+||+|||+|++|+||+|+|+||+||+||+ +|+||+|.|||++|.+ ||+|.+|+|+|.
T Consensus 337 ~~~-~~~~~~~g~~~~~~~~~~~~~TGDlg~~d~dG~l~~~gR~~d~ik~-~G~~v~p~EIE~~l~~~~p~V~~aavvg~ 414 (499)
T PLN03051 337 NAD-HDKVYYKGMPMYGSKGMPLRRHGDIMKRTPGGYFCVQGRADDTMNL-GGIKTSSVEIERACDRAVAGIAETAAVGV 414 (499)
T ss_pred CCc-ccceeeecCCccccCCcceeecCCeEEECCCCcEEEEeccCCEEee-CCEECCHHHHHHHHHhcCCCcceEEEEEe
Confidence 765 343322100 012348999999999999999999999999996 6999999999999986 999999999998
Q ss_pred CCC----ceEEEEE---EcChHHHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCCC
Q 004977 618 PFH----NYCVALV---VPSHKALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEPW 690 (721)
Q Consensus 618 ~~~----~~~~a~v---v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~~ 690 (721)
+++ +.++|+| +++++.. . ...+++.+.++++++ .+|++|+.|..|++++++
T Consensus 415 ~d~~~g~~~~~a~v~~~v~~~~~~---------~-----------~~~~~l~~~~~~~l~-~~l~~~~~~~~i~~v~~l- 472 (499)
T PLN03051 415 APPDGGPELLVIFLVLGEEKKGFD---------Q-----------ARPEALQKKFQEAIQ-TNLNPLFKVSRVKIVPEL- 472 (499)
T ss_pred cCCCCCceEEEEEEEcceeccccc---------c-----------cchHHHHHHHHHHHH-hhcCCccCCceEEEcCCC-
Confidence 875 3578888 6554310 0 001345566777776 789887777789999988
Q ss_pred CCCCCccCcccccChHHHHHHHHHHHH
Q 004977 691 TPEAGLVTAALKIKREQLKAKFKDDLQ 717 (721)
Q Consensus 691 ~p~~~~~t~~gKi~R~~l~~~~~~~i~ 717 (721)
| +|++|||+|++|++.+.+.+.
T Consensus 473 -P----~t~~GKi~r~~L~~~~~~~~~ 494 (499)
T PLN03051 473 -P----RNASNKLLRRVLRDQLKKELS 494 (499)
T ss_pred -C----CCCCccHHHHHHHHHHHHhhc
Confidence 6 999999999999998877654
No 110
>KOG1175 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=1e-61 Score=520.98 Aligned_cols=510 Identities=19% Similarity=0.229 Sum_probs=401.4
Q ss_pred HHHHHHHh-CCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEccCc
Q 004977 87 LFEQSCKS-HPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETC 165 (721)
Q Consensus 87 ~~~~~a~~-~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~ 165 (721)
.+.+..+. .++.++++++. ++. ++...+||.|+.+++.++|..|.+.|+++||+|++++|+.
T Consensus 69 ~~~~~~~~~~~~~~a~~~~~----------~~~-------~~~~~~t~~el~~~v~~~a~~l~~~g~~kGD~V~~~mPm~ 131 (626)
T KOG1175|consen 69 CLDRHIKEKGGDKVAIIFEG----------NEG-------GDTEVWTYKELLDQVVRLANVLRKCGLKKGDTVAIYMPMI 131 (626)
T ss_pred hhhhhhhhcCCCCcEEEEEe----------cCC-------CceEEEEHHHHHHHHHHHHHHHHhcCCCCCcEEEEeccCC
Confidence 34444333 48999999864 221 2223489999999999999999988999999999999999
Q ss_pred HhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccchhH---------HHhhhhcCCCc----cEEEEe
Q 004977 166 VEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKK---------LSAVSSSLKTI----KNVIYF 232 (721)
Q Consensus 166 ~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~---------~~~~~~~~~~~----~~ii~~ 232 (721)
+|+++++|||.++|++..++...+++.++...|++++++++|+.+..... +.+....++.. ...+.+
T Consensus 132 ~e~~ia~lA~~r~Gai~~~v~~~fs~~~l~~Rl~~~~~k~i~t~d~~~~~~k~i~~~~~~~~a~~~~~~~~~~~~~~~~~ 211 (626)
T KOG1175|consen 132 PEAVIAMLACARIGAIHSSVFAGFSAKELLDRLQDSKAKVIITQDVVARGGKSINLKCIVLEALLLVSDKSRPVWLDLIV 211 (626)
T ss_pred hHHHHHHHHHhhcCeEEEEeeccCCHHHHHHHHHhcCCCEEEEEeeeccCCCccchhhhHHHHhhcccccccccceeeEE
Confidence 99999999999999999999999999999999999999999998754321 11111111111 111111
Q ss_pred cCCCCCccCCccCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHHHH-HHHhhC
Q 004977 233 ENDGSEKDSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAA-AIKTLI 311 (721)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~-~~~~~~ 311 (721)
... .....|++........ .+....+.+|+.+|+|||||||.|||+.+++....-... .....+
T Consensus 212 ~~~--------------~~d~~~~~~~~~a~~~-~~~~~~~~edpl~IlfTSGtTg~PK~v~ht~~g~ll~~~~~~~~~~ 276 (626)
T KOG1175|consen 212 SRR--------------NRDLFWSLELKKASPE-HPCVPVKAEDPLFILFTSGTTGKPKGVIHTTGGYLLGAALTSRYHF 276 (626)
T ss_pred ecc--------------cccccHHHHhhhcCCC-CCceecCccCceEEEecCCCCCCCCceeeccCcchHHHhhhcceec
Confidence 110 1134555554433322 225677889999999999999999999999987555444 444456
Q ss_pred CCCCCCcEEEeccChHHHHHHHH-HHHHHHhcceEeeCccccccccchhhccCccCcceeecceEEeechHHHHHHHHHH
Q 004977 312 PNPGRSDVYLAYLPLAHVLELAA-ESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGV 390 (721)
Q Consensus 312 ~~~~~~d~~l~~~pl~h~~g~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~ 390 (721)
.+.++|+++++..+.|+.+-+. .+.+|+.|+|+++++-..+ + ...++..+.++++|++++.|+.++.|.+..
T Consensus 277 -d~q~~dv~~~~~d~GWi~g~~~~~~gpl~~Ga~~vl~~g~p~-~-----~~~~~~~v~k~~it~l~t~pt~~r~l~~~~ 349 (626)
T KOG1175|consen 277 -DLQPSDVLWCASDLGWITGHSYVLYGPLLNGATVVLYEGPPF-D-----PGRIWKILDKYKVTVLYTAPTAYRLLRRLG 349 (626)
T ss_pred -cCCCcceEEEecccCeeeccchhhhhhhhcCcEEEEEcCCCC-C-----hhhhhhhHhhcceEEEEeccHHHHHHHHhc
Confidence 9999999999999999998776 5668999999998332221 1 234455599999999999999999887643
Q ss_pred HHHHHhhcchhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHHHHHHHhhC
Q 004977 391 VKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMG 470 (721)
Q Consensus 391 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~~~~~~g 470 (721)
.+..... ..++||.+.++||++.++..+++.+.++
T Consensus 350 ~~~~~~~---------------------------------------------~~~sLk~~~S~Gepi~~~~~ew~~~~~~ 384 (626)
T KOG1175|consen 350 QEDVTSY---------------------------------------------SLKSLRTCGSVGEPINPEAWEWWKRVTG 384 (626)
T ss_pred ccccccc---------------------------------------------ccceEEEEeecCccCCcchHHHHHHhcC
Confidence 3221110 0037999999999999999999999998
Q ss_pred C-ccccccccccccccccccCCCC--CCCCccCCCcCcceEEEEecCCCCcccCCCCCCcceEEEccc---cccccccCC
Q 004977 471 A-PIGQAYGLTETCAGSTFSEWDD--PSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGF---NVTAGYFNN 544 (721)
Q Consensus 471 ~-~l~~~YG~TE~~~~~~~~~~~~--~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~---~v~~gY~~~ 544 (721)
. +|++.||+||++..+....... ..+++.|.|.+|+.+.|+| ++|..++. ..+.|||+++.+ +.+++||+|
T Consensus 385 ~~pv~e~~~qtEtG~~~i~~~~g~~p~~pg~~~~p~~g~~v~i~d-e~g~~~~~--~~~~G~l~~~~~~P~~~~r~~~~n 461 (626)
T KOG1175|consen 385 LDPIYETYGQTETGGICITPKPGKLPIKPGSAGKPFPGYDVQILD-ENGNELPP--STGNGELRLKPPWPPGMFRTLWGN 461 (626)
T ss_pred ccchhhceeeeccCceeeeccCCCCCcCccccCCCCCCcceEEEC-CCCCCcCC--CCceeEEEEeCCCCccccccccCC
Confidence 7 6999999999999887766655 6789999999999999999 57776652 117899999874 679999999
Q ss_pred CcccccccccCCCCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcccceEEEEecCCC---c
Q 004977 545 PGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYVDNIMIHADPFH---N 621 (721)
Q Consensus 545 ~~~t~~~f~~~~~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~ 621 (721)
++.-...+. ....|+|.|||.+++|+||++++.||.||+|++ +|+|+++.|||+++.+||.|.|++|+|.+++ +
T Consensus 462 ~erf~~~yf--~k~pg~y~tGD~~~rd~dGY~~i~GR~DDviNv-sGhRigtaEIE~al~~hp~VaEsAvVg~p~~~~ge 538 (626)
T KOG1175|consen 462 HERFRAAYF--KKFPGYYFTGDGGRRDEDGYYWILGRVDDVINV-SGHRIGTAEIESALVEHPAVAESAVVGSPDPIKGE 538 (626)
T ss_pred HHHhhhhhc--ccCCceEEecCceEEcCCceEEEEecccccccc-cceeecHHHHHHHHhhCcchhheeeecCCCCCCCe
Confidence 994444433 322289999999999999999999999999997 5999999999999999999999999999987 4
Q ss_pred eEEEEEEcChHHHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCCCCCCCCccCccc
Q 004977 622 YCVALVVPSHKALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEPWTPEAGLVTAAL 701 (721)
Q Consensus 622 ~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~~~p~~~~~t~~g 701 (721)
.++|||++.++. ...+++.++|+++.+ .++.+|..|+.|++++.+ | +|.+|
T Consensus 539 ~v~aFvvl~~g~----------------------~~~~~L~kel~~~VR-~~igp~a~P~~I~~v~~L--P----kTrSG 589 (626)
T KOG1175|consen 539 VVLAFVVLKSGS----------------------HDPEQLTKELVKHVR-SVIGPYAVPRLIVFVPGL--P----KTRSG 589 (626)
T ss_pred EEEEEEEEcCCC----------------------CChHHHHHHHHHHHH-hhcCcccccceeEecCCC--C----ccccc
Confidence 699999998763 112455677888887 999999999999999998 6 99999
Q ss_pred ccChHHHHHHHHHH
Q 004977 702 KIKREQLKAKFKDD 715 (721)
Q Consensus 702 Ki~R~~l~~~~~~~ 715 (721)
|+.|+.||+....+
T Consensus 590 KimRr~lrki~~g~ 603 (626)
T KOG1175|consen 590 KIMRRALRKIASGK 603 (626)
T ss_pred hhHHHHHHHHhccC
Confidence 99999999987654
No 111
>PRK05850 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.2e-61 Score=548.20 Aligned_cols=514 Identities=20% Similarity=0.269 Sum_probs=367.7
Q ss_pred CHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEc
Q 004977 83 TMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAILA 162 (721)
Q Consensus 83 tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~ 162 (721)
++.++|++++..+|+++|+++.+. ++. ..+..+.+||+||.++++++|++|.+.| .+||+|+|++
T Consensus 2 s~~~~l~~~a~~~p~~~a~~~~~~---------~~~-----~~~~~~~lty~eL~~~v~~~A~~L~~~g-~~gd~V~l~~ 66 (578)
T PRK05850 2 SVPSLLRERASLQPDDAAFTFIDY---------EQD-----PAGVAETLTWSQLYRRTLNVAEELRRHG-STGDRAVILA 66 (578)
T ss_pred cHHHHHHHHHhcCCCceEEEEEcc---------CCC-----CCCceeeecHHHHHHHHHHHHHHHHHhC-CCCCEEEEEc
Confidence 688999999999999999986421 000 0122357999999999999999999999 6899999999
Q ss_pred cCcHhHHHHHHHHHhcCCEEEEecC---CCCHHHHHHHHHhcCceEEEECccchhHHHhhhhcCC--CccEEEEecCCCC
Q 004977 163 ETCVEWFIAFQGCFRQSITVVTIYS---SLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLK--TIKNVIYFENDGS 237 (721)
Q Consensus 163 ~n~~e~~~~~lA~~~~G~~~vpl~~---~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~--~~~~ii~~~~~~~ 237 (721)
+|+++|++++|||+++|++++|+++ .++.+++.++|+++++++++++++..+.+.......+ ....++.++..
T Consensus 67 ~n~~~~~~~~lA~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 144 (578)
T PRK05850 67 PQGLEYIVAFLGALQAGLIAVPLSVPQGGAHDERVSAVLRDTSPSVVLTTSAVVDDVTEYVAPQPGQSAPPVIEVDLL-- 144 (578)
T ss_pred CCcccHHHHHHHHHHcCceEEecCCCCccchHHHHHHHHHhcCCCEEEEcHHHHHHHHHHHhhcccccccceEeeccc--
Confidence 9999999999999999999999997 4578999999999999999999887766554322111 11112221110
Q ss_pred CccCCccCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHHHHHHHhhCCC----
Q 004977 238 EKDSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPN---- 313 (721)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~---- 313 (721)
++ ............++|+++|+|||||||.||||++||+++++.+......+..
T Consensus 145 -------------------~~---~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~ 202 (578)
T PRK05850 145 -------------------DL---DSPRGSDARPRDLPSTAYLQYTSGSTRTPAGVMVSHRNVIANFEQLMSDYFGDTGG 202 (578)
T ss_pred -------------------cc---ccCCccccCCCCCCCeEEEEeCCCCCCCCceEEEeHHHHHHHHHHHHHhhcccccc
Confidence 00 0000011123467899999999999999999999999999887665443202
Q ss_pred -CCCCcEEEeccChHHHHHHHH-HHHHHHhcceEeeCccccccccchhhccCccCcceeecceEEeechHHHHHHHHHHH
Q 004977 314 -PGRSDVYLAYLPLAHVLELAA-ESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVV 391 (721)
Q Consensus 314 -~~~~d~~l~~~pl~h~~g~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~ 391 (721)
...++++++++|++|.+|+.. .+.+++.|+++++.++..+... +..+...+.+++++++ .+|..+..+.....
T Consensus 203 ~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~----p~~~~~~i~~~~~~~~-~~p~~~~~~~~~~~ 277 (578)
T PRK05850 203 VPPPDTTVVSWLPFYHDMGLVLGVCAPILGGCPAVLTSPVAFLQR----PARWMQLLASNPHAFS-AAPNFAFELAVRKT 277 (578)
T ss_pred CCCCcceEEEECCCCCCchhHHHHHHHHhcCCcEEEeCHHHHHHC----HHHHHHHHHHcCCeEE-eCCcHHHHHHHHhc
Confidence 356889999999999999865 7788999999988654322211 2223334888998855 56655443322100
Q ss_pred HHHHhhcchhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHHHHHHHhhC-
Q 004977 392 KKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMG- 470 (721)
Q Consensus 392 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~~~~~~g- 470 (721)
... .......+++|.+++||+++++++.+.+.+.++
T Consensus 278 ~~~-------------------------------------------~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~~~ 314 (578)
T PRK05850 278 SDD-------------------------------------------DMAGLDLGGVLGIISGSERVHPATLKRFADRFAP 314 (578)
T ss_pred chh-------------------------------------------hhcCcchhhheeEEECcCCCCHHHHHHHHHHHHh
Confidence 000 000111247999999999999999888877662
Q ss_pred -----CccccccccccccccccccCCCCC-------------------------CCCccCCCcCcceEEEEecCCCCccc
Q 004977 471 -----APIGQAYGLTETCAGSTFSEWDDP-------------------------SVGRVGPPVPCCYIKLVSWDEGGYKT 520 (721)
Q Consensus 471 -----~~l~~~YG~TE~~~~~~~~~~~~~-------------------------~~~~vG~p~p~~~v~i~d~~~~~~~~ 520 (721)
..+++.||+||++..+........ ...++|.|. +.+++|+|++++..
T Consensus 315 ~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~g~p~-~~~~~ivd~~~~~~-- 391 (578)
T PRK05850 315 FNLRETAIRPSYGLAEATVYVATREPGQPPESVRFDYEKLSAGHAKRCETGGGTPLVSYGSPR-SPTVRIVDPDTCIE-- 391 (578)
T ss_pred cCcCcccccCccchhhhhhheeccCCCCCceEEEECHHHHhCCceEecCCCCCceEEeccCCC-CCEEEEEcCCCCcC--
Confidence 368999999998765443321110 012345554 57999999655554
Q ss_pred CCCCCCcceEEEccccccccccCCCcccccccccC---C----CCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeee
Q 004977 521 SDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVD---E----RGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEY 593 (721)
Q Consensus 521 ~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~---~----~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~ 593 (721)
+++|+.|||+|+|++++.|||++|+.|++.|..+ + ...|||+|||+|+++ ||+|+|+||+||+||+ +|++
T Consensus 392 -~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~f~~~~~~~~~~~~~~~w~~TGDl~~~~-~G~l~~~GR~~d~i~~-~G~~ 468 (578)
T PRK05850 392 -CPAGTVGEIWVHGDNVAAGYWQKPEETERTFGATLVDPSPGTPEGPWLRTGDLGFIS-EGELFIVGRIKDLLIV-DGRN 468 (578)
T ss_pred -CCCCCEEEEEEecCcccccccCChhhhHHHhhcccccccccCCCCCeeeccceeeEE-CCEEEEEcccccEEEE-CCee
Confidence 4588999999999999999999999999998420 0 012799999999998 9999999999999997 6999
Q ss_pred eechHHHHHHhcCcccceEEEEecCCC--ceEEEEEEcChHHHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHH
Q 004977 594 ISLGKVEAALISSDYVDNIMIHADPFH--NYCVALVVPSHKALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKA 671 (721)
Q Consensus 594 v~p~eIE~~l~~~p~V~~~~V~g~~~~--~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 671 (721)
|+|.|||++|.+||.+. ++|++.+++ +.++|+|++++... .+.+ .....+.+.+++.+.++
T Consensus 469 i~p~eIE~~l~~~~~~~-~~v~~v~~~~~~~~~a~v~~~~~~~--------~~~~-------~~~~~~~l~~~v~~~l~- 531 (578)
T PRK05850 469 HYPDDIEATIQEITGGR-VAAISVPDDGTEKLVAIIELKKRGD--------SDEE-------AMDRLRTVKREVTSAIS- 531 (578)
T ss_pred cCHHHHHHHHHHhcCCc-EEEEEecCCCceEEEEEEEeccccC--------cchh-------hhhhHHHHHHHHHHHHH-
Confidence 99999999999999864 778887765 35889988765320 0000 00122334444444433
Q ss_pred CCCCCcccccEEEeeC--CCCCCCCCccCcccccChHHHHHHHHH
Q 004977 672 AKLDKFEIPAKIKLMP--EPWTPEAGLVTAALKIKREQLKAKFKD 714 (721)
Q Consensus 672 ~~L~~~~~P~~i~~~~--~~~~p~~~~~t~~gKi~R~~l~~~~~~ 714 (721)
. .....|..+++++ .+ | +|++||++|++|+++|++
T Consensus 532 ~--~~~~~~~~~~~~~~~~i--P----~t~~GKi~R~~l~~~~~~ 568 (578)
T PRK05850 532 K--SHGLSVADLVLVAPGSI--P----ITTSGKIRRAACVEQYRQ 568 (578)
T ss_pred H--HhCCCceEEEEeCCCCc--C----CCCCchHHHHHHHHHHHc
Confidence 1 1123567777775 34 6 999999999999999875
No 112
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.4e-60 Score=534.95 Aligned_cols=479 Identities=21% Similarity=0.276 Sum_probs=383.9
Q ss_pred EeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEC
Q 004977 130 WQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICD 209 (721)
Q Consensus 130 ~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~ 209 (721)
.+||+||.++++++|++|.+.|+++||+|+++++|+++++++++||+++|++++|+++.++.+++.+++++++++++|++
T Consensus 11 ~~ty~el~~~v~~~a~~L~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~ii~~ 90 (502)
T PRK08276 11 VVTYGELEARSNRLAHGLRALGLREGDVVAILLENNPEFFEVYWAARRSGLYYTPINWHLTAAEIAYIVDDSGAKVLIVS 90 (502)
T ss_pred EEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeCCCHHHHHHHHHHHhcCcEEEecccccCHHHHHHHHhcCCCCEEEEc
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchhHHHhhhhcCC-CccEEEEecCCCCCccCCccCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEeccCCCC
Q 004977 210 SKQLKKLSAVSSSLK-TIKNVIYFENDGSEKDSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTG 288 (721)
Q Consensus 210 ~~~~~~~~~~~~~~~-~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG 288 (721)
+.....+....+..+ .++.++..+... .....+++...... .......++.++++|||||||
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~----~~~~~~~~~~a~i~~TSGtTG 153 (502)
T PRK08276 91 AALADTAAELAAELPAGVPLLLVVAGPV-------------PGFRSYEEALAAQP----DTPIADETAGADMLYSSGTTG 153 (502)
T ss_pred cchhhHHHHHhhhccccccEEEEeCCCC-------------CccccHHHHHhcCC----CCCCCCCCcceEEEECCCCCC
Confidence 887776665555554 455555542211 11234555443211 112235677899999999999
Q ss_pred CcchheeccHHHHHHHH------HHHhhCCCCCCCcEEEeccChHHHHHHHHHHHHHHhcceEeeCccccccccchhhcc
Q 004977 289 LPKGVMITHGNIVATAA------AIKTLIPNPGRSDVYLAYLPLAHVLELAAESIMLCAGCAIGYGSTLTMTDTSSKIKK 362 (721)
Q Consensus 289 ~PKgV~~sh~~l~~~~~------~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~ 362 (721)
.||+|+++|.++..... ...... ....++++++.+|++|.+++...+.++..|+++++.+... +.
T Consensus 154 ~PK~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~--------~~ 224 (502)
T PRK08276 154 RPKGIKRPLPGLDPDEAPGMMLALLGFGM-YGGPDSVYLSPAPLYHTAPLRFGMSALALGGTVVVMEKFD--------AE 224 (502)
T ss_pred CCceEEEccCCcchhhhhHHhhhhhhhcc-cCCCCCEEEEcCcHHHHHHHHHHHHHHhccceEEEcCCCC--------HH
Confidence 99999999887654321 111112 2357889999999999999888778899999998754211 12
Q ss_pred CccCcceeecceEEeechHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHH
Q 004977 363 GTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAV 442 (721)
Q Consensus 363 ~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (721)
.+...++++++|++.++|+++..+.+...... ...
T Consensus 225 ~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~---------------------------------------------~~~ 259 (502)
T PRK08276 225 EALALIERYRVTHSQLVPTMFVRMLKLPEEVR---------------------------------------------ARY 259 (502)
T ss_pred HHHHHHHHhCCeEEEehHHHHHHHHhCccccC---------------------------------------------CCC
Confidence 22333999999999999999998865311000 001
Q ss_pred hCCcEEEEEecCCCCCHHHHHHHHHhhCCccccccccccccccccccCCC-CCCCCccCCCcCcceEEEEecCCCCcccC
Q 004977 443 LGGRIRFMICGGAPLSADSQRFINICMGAPIGQAYGLTETCAGSTFSEWD-DPSVGRVGPPVPCCYIKLVSWDEGGYKTS 521 (721)
Q Consensus 443 ~~~~lr~v~~gG~~l~~~~~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~-~~~~~~vG~p~p~~~v~i~d~~~~~~~~~ 521 (721)
+.+++|.+++||++++.++.+++.+.+|..+++.||+||++.++...... ....+++|+|+ +++++|+| +++..+
T Consensus 260 ~~~~lr~i~~~g~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~G~~~-~~~~~i~d-~~~~~~-- 335 (502)
T PRK08276 260 DVSSLRVAIHAAAPCPVEVKRAMIDWWGPIIHEYYASSEGGGVTVITSEDWLAHPGSVGKAV-LGEVRILD-EDGNEL-- 335 (502)
T ss_pred CcccceEEEecCCCCCHHHHHHHHHHhCcHhhhhcccccccceeEecCccccccCCCcceec-ccEEEEEC-CCCCCC--
Confidence 12589999999999999999999998899999999999998765543322 23457899999 88999998 555543
Q ss_pred CCCCCcceEEEccccccccccCCCcccccccccCCCCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHH
Q 004977 522 DKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEA 601 (721)
Q Consensus 522 ~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~~~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~ 601 (721)
+.|+.|||+++|+.++.||+++++.+.+.|. .+ +||+|||+|+++++|.+++.||.||+||+ +|++|+|.+||.
T Consensus 336 -~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~--~~--~~~~TGD~~~~~~~g~~~~~GR~~~~i~~-~G~~v~~~~iE~ 409 (502)
T PRK08276 336 -PPGEIGTVYFEMDGYPFEYHNDPEKTAAARN--PH--GWVTVGDVGYLDEDGYLYLTDRKSDMIIS-GGVNIYPQEIEN 409 (502)
T ss_pred -cCCCceEEEEECCCccchhcCCHHHHHHHhc--CC--CceeecceEEEcCCcCEEEeccCcceEEe-CCEEeCHHHHHH
Confidence 4789999999999999999999999999986 55 89999999999999999999999999997 699999999999
Q ss_pred HHhcCcccceEEEEecCCCc---eEEEEEEcChHHHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcc
Q 004977 602 ALISSDYVDNIMIHADPFHN---YCVALVVPSHKALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFE 678 (721)
Q Consensus 602 ~l~~~p~V~~~~V~g~~~~~---~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~ 678 (721)
+|.++|+|.+|+|++..++. .++++|++.++.. . + +.+.+++++.++ .+|+.|+
T Consensus 410 ~i~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~----------~--------~----~~~~~~i~~~~~-~~l~~~~ 466 (502)
T PRK08276 410 LLVTHPKVADVAVFGVPDEEMGERVKAVVQPADGAD----------A--------G----DALAAELIAWLR-GRLAHYK 466 (502)
T ss_pred HHHhCCCcceEEEEeCCCcccCceEEEEEEECCCCC----------C--------C----hhhHHHHHHHHH-hhccCCC
Confidence 99999999999999987653 6899999865320 0 1 122356777887 8999999
Q ss_pred cccEEEeeCCCCCCCCCccCcccccChHHHHHHHHHHHHh
Q 004977 679 IPAKIKLMPEPWTPEAGLVTAALKIKREQLKAKFKDDLQM 718 (721)
Q Consensus 679 ~P~~i~~~~~~~~p~~~~~t~~gKi~R~~l~~~~~~~i~~ 718 (721)
+|..+++++++ | +|++||++|++|++.|-+.-++
T Consensus 467 ~p~~i~~~~~l--P----~t~~GKi~r~~L~~~~~~~~~~ 500 (502)
T PRK08276 467 CPRSIDFEDEL--P----RTPTGKLYKRRLRDRYWEGRQR 500 (502)
T ss_pred CCcEEEEecCC--C----CCcccchhHHHHHHHHHhhhhh
Confidence 99999999988 6 9999999999999998877654
No 113
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=1.1e-59 Score=528.48 Aligned_cols=484 Identities=22% Similarity=0.221 Sum_probs=376.0
Q ss_pred EEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEE
Q 004977 129 EWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLIC 208 (721)
Q Consensus 129 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~ 208 (721)
+.+||.||.++++++|++|.+.|+++||+|+++++|+++++++++||+++|++++|+++.++.+++.++++.++++++++
T Consensus 10 ~~~Ty~el~~~~~~la~~l~~~g~~~g~~V~v~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~i~~ 89 (509)
T PRK12406 10 RRRSFDELAQRAARAAGGLAALGVRPGDCVALLMRNDFAFFEAAYAAMRLGAYAVPVNWHFKPEEIAYILEDSGARVLIA 89 (509)
T ss_pred eeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCeEEEecCcccCHHHHHHHHhccCCcEEEE
Confidence 36999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccchhHHHhhhhcCCCccEEEEecCCCCC-ccCCccC--CCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEeccC
Q 004977 209 DSKQLKKLSAVSSSLKTIKNVIYFENDGSE-KDSGVSG--GISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSG 285 (721)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSG 285 (721)
+......+.... +....++........ ....... ........+++++..... ......++++++++||||
T Consensus 90 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~a~i~~TSG 162 (509)
T PRK12406 90 HADLLHGLASAL---PAGVTVLSVPTPPEIAAAYRISPALLTPPAGAIDWEGWLAQQE----PYDGPPVPQPQSMIYTSG 162 (509)
T ss_pred ccchhhhhhhhh---hcccceeecccccccccccccccccccCCCCccCHHHHhcccC----ccCCCCCCCceEEEECCC
Confidence 887765544322 111122222111000 0000000 000112345665543211 112335789999999999
Q ss_pred CCCCcchheeccHHHH---HHHHHHHhhCCCCCCCcEEEeccChHHHHHHHHHHHHHHhcceEeeCccccccccchhhcc
Q 004977 286 STGLPKGVMITHGNIV---ATAAAIKTLIPNPGRSDVYLAYLPLAHVLELAAESIMLCAGCAIGYGSTLTMTDTSSKIKK 362 (721)
Q Consensus 286 TTG~PKgV~~sh~~l~---~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~ 362 (721)
|||.||+|+++|.+.. .........+ ++.+++++++.+|++|..+....+.++..|+++++.+... +.
T Consensus 163 tTG~PK~v~~s~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~--------~~ 233 (509)
T PRK12406 163 TTGHPKGVRRAAPTPEQAAAAEQMRALIY-GLKPGIRALLTGPLYHSAPNAYGLRAGRLGGVLVLQPRFD--------PE 233 (509)
T ss_pred CCCCCceEEEechhHHHHHHHHHhhhhhc-CCCCCceEEEEeCCcccchHHHHHHHHhhheEEEEccCCC--------HH
Confidence 9999999999776543 3333344455 7889999999999999988777777788999988843221 12
Q ss_pred CccCcceeecceEEeechHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHH
Q 004977 363 GTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAV 442 (721)
Q Consensus 363 ~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (721)
.++..++++++|++.++|+++..+.+...... +..
T Consensus 234 ~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~---------------------------------------------~~~ 268 (509)
T PRK12406 234 ELLQLIERHRITHMHMVPTMFIRLLKLPEEVR---------------------------------------------AKY 268 (509)
T ss_pred HHHHHHHHcCCeEEEccHHHHHHHHhCchhhc---------------------------------------------ccC
Confidence 23334999999999999999998865211000 001
Q ss_pred hCCcEEEEEecCCCCCHHHHHHHHHhhCCccccccccccccccccccCCC-CCCCCccCCCcCcceEEEEecCCCCcccC
Q 004977 443 LGGRIRFMICGGAPLSADSQRFINICMGAPIGQAYGLTETCAGSTFSEWD-DPSVGRVGPPVPCCYIKLVSWDEGGYKTS 521 (721)
Q Consensus 443 ~~~~lr~v~~gG~~l~~~~~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~-~~~~~~vG~p~p~~~v~i~d~~~~~~~~~ 521 (721)
..+++|.+++||+++++++.+++.+.+++.+++.||+||++.+++....+ ....+++|+|+++++++|+| +++..+
T Consensus 269 ~~~~l~~v~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d-~~~~~~-- 345 (509)
T PRK12406 269 DVSSLRHVIHAAAPCPADVKRAMIEWWGPVIYEYYGSTESGAVTFATSEDALSHPGTVGKAAPGAELRFVD-EDGRPL-- 345 (509)
T ss_pred CCCceeEEEEcCCCCCHHHHHHHHHHcCCcEEeeccccccCceEecCcccccccCCCcCccCCCcEEEEEC-CCCCCC--
Confidence 12589999999999999999999998899999999999999765543322 23457899999999999999 556543
Q ss_pred CCCCCcceEEEccccccc-cccCCCcccccccccCCCCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHH
Q 004977 522 DKPMPRGEIVVGGFNVTA-GYFNNPGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVE 600 (721)
Q Consensus 522 ~~~g~~GEl~v~g~~v~~-gY~~~~~~t~~~f~~~~~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE 600 (721)
+.|+.|||+++|+.++. ||+++++.+++.+ .+ +||+|||+|++|+||++++.||.||+||+ +|++|+|.+||
T Consensus 346 -~~g~~Gel~v~~~~~~~~~y~~~~~~~~~~~---~~--~~~~TGD~~~~~~~g~~~~~GR~~d~ik~-~G~~v~~~~IE 418 (509)
T PRK12406 346 -PQGEIGEIYSRIAGNPDFTYHNKPEKRAEID---RG--GFITSGDVGYLDADGYLFLCDRKRDMVIS-GGVNIYPAEIE 418 (509)
T ss_pred -CCCCceEEEEECCccccccccCCchhccccc---CC--CCeEEccEEEEcCCceEEEeecccceEEE-CCEEECHHHHH
Confidence 47889999999999875 9999999888776 66 89999999999999999999999999996 69999999999
Q ss_pred HHHhcCcccceEEEEecCCCc---eEEEEEEcChHHHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCc
Q 004977 601 AALISSDYVDNIMIHADPFHN---YCVALVVPSHKALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKF 677 (721)
Q Consensus 601 ~~l~~~p~V~~~~V~g~~~~~---~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~ 677 (721)
++|.++|+|.+++|++.++.. .++++|++.+.. .. ..++|+++++ ..|++|
T Consensus 419 ~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~----------~~---------------~~~~l~~~l~-~~l~~~ 472 (509)
T PRK12406 419 AVLHAVPGVHDCAVFGIPDAEFGEALMAVVEPQPGA----------TL---------------DEADIRAQLK-ARLAGY 472 (509)
T ss_pred HHHHhCCCeeEEEEEeeeccccCceeEEEEEECCCC----------CC---------------CHHHHHHHHH-HhcccC
Confidence 999999999999999987653 478888876431 00 0256778887 899999
Q ss_pred ccccEEEeeCCCCCCCCCccCcccccChHHHHHHHHHH
Q 004977 678 EIPAKIKLMPEPWTPEAGLVTAALKIKREQLKAKFKDD 715 (721)
Q Consensus 678 ~~P~~i~~~~~~~~p~~~~~t~~gKi~R~~l~~~~~~~ 715 (721)
++|..+++++++ | +|++||++|++|++.|.+.
T Consensus 473 ~~P~~i~~~~~i--P----~t~~GK~~r~~L~~~~~~~ 504 (509)
T PRK12406 473 KVPKHIEIMAEL--P----REDSGKIFKRRLRDPYWAN 504 (509)
T ss_pred CCCcEEEEeccC--C----CCCccchhHHHHHHHHHhh
Confidence 999999999988 6 9999999999999887653
No 114
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=8.2e-59 Score=525.80 Aligned_cols=496 Identities=21% Similarity=0.298 Sum_probs=368.2
Q ss_pred CCCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEE
Q 004977 81 ASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAI 160 (721)
Q Consensus 81 ~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i 160 (721)
+.++.+.+...|..+|+.+++... ++. +.+||.||+++++++|++|.+.|+++||+|+|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~----------~~~ty~el~~~v~~~a~~L~~~g~~~gd~V~l 59 (545)
T PRK07768 1 MSRFTEKMYANARTSPRGMVTGEP-----------DAP----------VRHTWGEVHERARRIAGGLAAAGVGPGDAVAV 59 (545)
T ss_pred CchHHHHHHHHhhCCCcceEEecC-----------CCc----------eEecHHHHHHHHHHHHHHHHHhCCCCCCEEEE
Confidence 357889899999999999988653 322 47999999999999999999999999999999
Q ss_pred EccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHH-------HHHHHhcCceEEEECccchhHHHhhhhcCCCccEEEEec
Q 004977 161 LAETCVEWFIAFQGCFRQSITVVTIYSSLGEDAL-------IHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFE 233 (721)
Q Consensus 161 ~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l-------~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~ii~~~ 233 (721)
+++|+++|+++++||+++|++++|+++..+.+++ .++++.++++.+++++.....+..+...
T Consensus 60 ~~~~~~~~~~~~la~~~~g~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~----------- 128 (545)
T PRK07768 60 LAGAPVEIAPTAQGLWMRGASLTMLHQPTPRTDLAVWAEDTLRVIGMIGAKAVVVGEPFLAAAPVLEEK----------- 128 (545)
T ss_pred ECCCchHHHHHHHHHHHcCccccccCCCCCcchhHHHHHHHHHHHHhCCCCEEEecchhhhhhhhhccc-----------
Confidence 9999999999999999999999999998886544 5567778999999987654433221100
Q ss_pred CCCCCccCCccCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHHHHHHHhhCCC
Q 004977 234 NDGSEKDSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPN 313 (721)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~ 313 (721)
...+.+++++..... .......++++++|+|||||||.||||+++|+++...+......+ +
T Consensus 129 ---------------~~~~~~~~~l~~~~~---~~~~~~~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~~~-~ 189 (545)
T PRK07768 129 ---------------GIRVLTVADLLAADP---IDPVETGEDDLALMQLTSGSTGSPKAVQITHGNLYANAEAMFVAA-E 189 (545)
T ss_pred ---------------CCceeehhhhcccCC---CCcCCCCCCCEEEEEeCCCCCCCCceEEEcHHHHHHHHHHHHHhc-C
Confidence 122344555543221 122345679999999999999999999999999999888877777 7
Q ss_pred CCCC-cEEEeccChHHHHHHHH-HHHHHHhcceEeeCccccccccchhhccCccCcceeecceEEeechHHHHHHHHHHH
Q 004977 314 PGRS-DVYLAYLPLAHVLELAA-ESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVV 391 (721)
Q Consensus 314 ~~~~-d~~l~~~pl~h~~g~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~ 391 (721)
+.++ |++++.+|++|.+++.. .+.++..|+++++..+..+... +..+...++++++|++..+|.++..+.+...
T Consensus 190 ~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~~~~~~~~----~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~ 265 (545)
T PRK07768 190 FDVETDVMVSWLPLFHDMGMVGFLTVPMYFGAELVKVTPMDFLRD----PLLWAELISKYRGTMTAAPNFAYALLARRLR 265 (545)
T ss_pred CCCCCceeEEeCCCccchHHHHHHHHHHHCCceEEEeCHHHHHHh----HHHHHHHHHHhCCEEEECchHHHHHHHHHHh
Confidence 7776 89999999999999876 5567999999887544332211 1122333899999999888887776654321
Q ss_pred HHHHhhcchhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHHHHHHHh---
Q 004977 392 KKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINIC--- 468 (721)
Q Consensus 392 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~~~~~--- 468 (721)
..... +..+++++|.+++||+++++++.+.+.+.
T Consensus 266 ~~~~~-------------------------------------------~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~ 302 (545)
T PRK07768 266 RQAKP-------------------------------------------GAFDLSSLRFALNGAEPIDPADVEDLLDAGAR 302 (545)
T ss_pred ccccc-------------------------------------------cCCCchheeeEEeccCCCCHHHHHHHHHHHHh
Confidence 10000 00112589999999999999998888763
Q ss_pred hCC---ccccccccccccccccccCCC--------------------------CCCCCccCCCcCcceEEEEecCCCCcc
Q 004977 469 MGA---PIGQAYGLTETCAGSTFSEWD--------------------------DPSVGRVGPPVPCCYIKLVSWDEGGYK 519 (721)
Q Consensus 469 ~g~---~l~~~YG~TE~~~~~~~~~~~--------------------------~~~~~~vG~p~p~~~v~i~d~~~~~~~ 519 (721)
+|. .+++.||+||++..++..... ....+++|+|+++++++|+| ++++.+
T Consensus 303 ~g~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~-~~~~~~ 381 (545)
T PRK07768 303 FGLRPEAILPAYGMAEATLAVSFSPCGAGLVVDEVDADLLAALRRAVPATKGNTRRLATLGPPLPGLEVRVVD-EDGQVL 381 (545)
T ss_pred cCCCcccccccccccccceEEEccCCCCCcceeeechhHhhccCceeccCCCCcceEEeccCCCCCCEEEEEC-CCCCCC
Confidence 454 499999999998765443221 11236899999999999999 666654
Q ss_pred cCCCCCCcceEEEccccccccccCCCcccccccccCCCCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHH
Q 004977 520 TSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKV 599 (721)
Q Consensus 520 ~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~~~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eI 599 (721)
++|+.|||+++|+.++.||++++....... .+ |||+|||+|++|+||.++++||.||+||+ +|++|+|.||
T Consensus 382 ---~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~---~~--g~~~TGDl~~~~~~g~l~~~GR~~d~i~~-~G~~v~~~ei 452 (545)
T PRK07768 382 ---PPRGVGVIELRGESVTPGYLTMDGFIPAQD---AD--GWLDTGDLGYLTEEGEVVVCGRVKDVIIM-AGRNIYPTDI 452 (545)
T ss_pred ---CCCCEEEEEEccCcccccccCCCCCccccc---CC--CeeeccceEEEecCCEEEEEccccceEEE-CCEecCHHHH
Confidence 478999999999999999998654443322 44 89999999999999999999999999998 5999999999
Q ss_pred HHHHhcCcccceEEEEecC--CC--c-eEEEEEEcChHHHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCC
Q 004977 600 EAALISSDYVDNIMIHADP--FH--N-YCVALVVPSHKALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKL 674 (721)
Q Consensus 600 E~~l~~~p~V~~~~V~g~~--~~--~-~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L 674 (721)
|++|.+||+|.+++|++.+ +. . .++.++.+.... ++.....+.+.+++.+. ..+
T Consensus 453 E~~l~~~~~v~~~~vv~~~~~~~~~~~~~~~~v~~~~~~--------------------~~~~~~~l~~~~~~~l~-~~~ 511 (545)
T PRK07768 453 ERAAARVEGVRPGNAVAVRLDAGHSREGFAVAVESNAFE--------------------DPAEVRRIRHQVAHEVV-AEV 511 (545)
T ss_pred HHHHHhCcccccceEEEEEecCCCCceEEEEEEEecccc--------------------cHHHHHHHHHHHHHHHH-HHh
Confidence 9999999999998877643 22 2 233333332211 00111122233333322 111
Q ss_pred CCcccccEEEeeC--CCCCCCCCccCcccccChHHHHHHHH
Q 004977 675 DKFEIPAKIKLMP--EPWTPEAGLVTAALKIKREQLKAKFK 713 (721)
Q Consensus 675 ~~~~~P~~i~~~~--~~~~p~~~~~t~~gKi~R~~l~~~~~ 713 (721)
. .+|..+.+++ .+ | +|++||++|+.|+++|.
T Consensus 512 ~--~~p~~v~~v~~~~l--P----~t~~GKi~r~~l~~~~~ 544 (545)
T PRK07768 512 G--VRPRNVVVLGPGSI--P----KTPSGKLRRANAAELVT 544 (545)
T ss_pred C--CCccEEEEeCCCcC--C----CCCchhHHHHHHHHhcC
Confidence 1 5788898887 34 6 99999999999998774
No 115
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=100.00 E-value=8.3e-59 Score=511.32 Aligned_cols=432 Identities=25% Similarity=0.354 Sum_probs=355.8
Q ss_pred eHHHHHHHHHHHHHHHHhCCCCCCCEEEEEccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECcc
Q 004977 132 TYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSK 211 (721)
Q Consensus 132 Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~ 211 (721)
||+||.++++++|+.|.+.|+++||+|+|+++|+++++++++||+++|++++|+++.++.+++.+++++++++.+++++.
T Consensus 1 Ty~~l~~~~~~~a~~l~~~g~~~gd~v~i~~~~~~~~~~~~la~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 80 (436)
T TIGR01923 1 TWQDLDCEAAHLAKALKAQGIRSGSRVALVGQNSIEMVLLLHACLLLGAEIAMLNTRLTENERTNQLEDLDVQLLLTDSL 80 (436)
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHhcCcEEEecCcCCCHHHHHHHHHhcCCCEEEEcCc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred chhHHHhhhhcCCCccEEEEecCCCCCccCCccCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEeccCCCCCcc
Q 004977 212 QLKKLSAVSSSLKTIKNVIYFENDGSEKDSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPK 291 (721)
Q Consensus 212 ~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PK 291 (721)
...... ....+.++................+++++++|||||||.||
T Consensus 81 ~~~~~~---------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK 127 (436)
T TIGR01923 81 LEEKDF---------------------------------QADSLDRIEAAGRYETSLSASFNMDQIATLMFTSGTTGKPK 127 (436)
T ss_pred ccccce---------------------------------eecchHhhhhcccccccccccCCcCceEEEEeCCCCCCCCc
Confidence 421100 00011111111111111123345688999999999999999
Q ss_pred hheeccHHHHHHHHHHHhhCCCCCCCcEEEeccChHHHHHHHHHHHHHHhcceEeeCccccccccchhhccCccCcceee
Q 004977 292 GVMITHGNIVATAAAIKTLIPNPGRSDVYLAYLPLAHVLELAAESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVL 371 (721)
Q Consensus 292 gV~~sh~~l~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 371 (721)
+|+++|+++...+......+ ++.++|++++.+|++|..++...+.++..|+++++.++.. .++..++++
T Consensus 128 ~v~~s~~~~~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~----------~~~~~l~~~ 196 (436)
T TIGR01923 128 AVPHTFRNHYASAVGSKENL-GFTEDDNWLLSLPLYHISGLSILFRWLIEGATLRIVDKFN----------QLLEMIANE 196 (436)
T ss_pred EEEEehHHHHHHHHHHHhhc-CCCCCceEEEccCcHhHHHHHHHHHHHhcCceEEecchHH----------HHHHHHHHh
Confidence 99999999999998888888 8999999999999999999987888899999998865432 122339999
Q ss_pred cceEEeechHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEE
Q 004977 372 KPTLMAAVPAIFDRVREGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMI 451 (721)
Q Consensus 372 ~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~ 451 (721)
++|++.++|+++..+.+.... .+++|.++
T Consensus 197 ~~t~~~~~P~~l~~l~~~~~~---------------------------------------------------~~~l~~~~ 225 (436)
T TIGR01923 197 RVTHISLVPTQLNRLLDEGGH---------------------------------------------------NENLRKIL 225 (436)
T ss_pred CCeEEEeHHHHHHHHHhCcCC---------------------------------------------------CCceEEEE
Confidence 999999999999888652100 03799999
Q ss_pred ecCCCCCHHHHHHHHHhhCCccccccccccccccccccCCCC-CCCCccCCCcCcceEEEEecCCCCcccCCCCCCcceE
Q 004977 452 CGGAPLSADSQRFINICMGAPIGQAYGLTETCAGSTFSEWDD-PSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEI 530 (721)
Q Consensus 452 ~gG~~l~~~~~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~~-~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl 530 (721)
+||+++++++.++++. .|+.+++.||+||++..++...... ....++|+|+++++++|.+.+. ++.|||
T Consensus 226 ~~G~~~~~~~~~~~~~-~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~~~---------~~~Gel 295 (436)
T TIGR01923 226 LGGSAIPAPLIEEAQQ-YGLPIYLSYGMTETCSQVTTATPEMLHARPDVGRPLAGREIKIKVDNK---------EGHGEI 295 (436)
T ss_pred ECCCCCCHHHHHHHHH-hCCceeeEecCCccchhccCcCccccccccCCCccCCCcEEEEEeCCC---------CCceEE
Confidence 9999999999888876 5999999999999987665443322 2223599999999999954121 267999
Q ss_pred EEccccccccccCCCcccccccccCCCCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcccc
Q 004977 531 VVGGFNVTAGYFNNPGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYVD 610 (721)
Q Consensus 531 ~v~g~~v~~gY~~~~~~t~~~f~~~~~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~ 610 (721)
+++|+.++.||+++++.+...+ .+ |||+|||+|++++||++++.||.||+||+ +|++|+|.+||++|.++|.|.
T Consensus 296 ~v~~~~~~~gy~~~~~~~~~~~---~~--~~~~TGD~~~~~~dg~~~~~GR~~d~i~~-~G~~v~~~~iE~~l~~~~~v~ 369 (436)
T TIGR01923 296 MVKGANLMKGYLYQGELTPAFE---QQ--GWFNTGDIGELDGEGFLYVLGRRDDLIIS-GGENIYPEEIETVLYQHPGIQ 369 (436)
T ss_pred EEECCccchhhCCChhhhhhhh---cC--CCeeccceEEEcCCCCEEEeccccCeEEe-CCEeeCHHHHHHHHHhCCCee
Confidence 9999999999999888887665 55 89999999999999999999999999997 699999999999999999999
Q ss_pred eEEEEecCCC---ceEEEEEEcChHHHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeC
Q 004977 611 NIMIHADPFH---NYCVALVVPSHKALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMP 687 (721)
Q Consensus 611 ~~~V~g~~~~---~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~ 687 (721)
+++|++.++. ..++++|++.++. + .+++.++++ +.|+.|++|..+++++
T Consensus 370 ~~~v~~~~~~~~~~~~~~~v~~~~~~----------~-----------------~~~l~~~l~-~~l~~~~~p~~i~~~~ 421 (436)
T TIGR01923 370 EAVVVPKPDAEWGQVPVAYIVSESDI----------S-----------------QAKLIAYLT-EKLAKYKVPIAFEKLD 421 (436)
T ss_pred EEEEeCCcchhcCCeeEEEEEECCCC----------C-----------------HHHHHHHHH-HhhhCCCCCeEEEEec
Confidence 9999998765 3577888876421 0 256777777 8899999999999999
Q ss_pred CCCCCCCCccCcccccChHHH
Q 004977 688 EPWTPEAGLVTAALKIKREQL 708 (721)
Q Consensus 688 ~~~~p~~~~~t~~gKi~R~~l 708 (721)
++ | +|++||++|++|
T Consensus 422 ~i--P----~t~~GK~~r~~L 436 (436)
T TIGR01923 422 EL--P----YNASGKILRNQL 436 (436)
T ss_pred CC--C----CCCCCceecccC
Confidence 88 6 999999999875
No 116
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=100.00 E-value=1.4e-57 Score=466.30 Aligned_cols=500 Identities=21% Similarity=0.230 Sum_probs=392.7
Q ss_pred CCCCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEE
Q 004977 80 GASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAA 159 (721)
Q Consensus 80 ~~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~ 159 (721)
...|++++|..+++++|+++|+++.. . .+.+||+|++++++++|+.|...|++.||.||
T Consensus 75 ~~~ti~~~F~~~vrr~p~k~aii~~~----------~-----------~~~~Tf~e~~~~s~~~A~~~~~~~l~~GD~VA 133 (649)
T KOG1179|consen 75 ERRTIAELFLSQVRRQPDKPAIIYEG----------P-----------FQSLTFAELDARSNRVANYLHAEGLKAGDVVA 133 (649)
T ss_pred cCCcHHHHHHHHHHhCCCccEEEEeC----------C-----------CceeeHHHHHHHHHHHHHHHHHhhcccCCEEE
Confidence 45799999999999999999999852 1 13699999999999999999999999999999
Q ss_pred EEccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccchhHHHhhhhcCCCc-cEEEEecCCCCC
Q 004977 160 ILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTI-KNVIYFENDGSE 238 (721)
Q Consensus 160 i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~-~~ii~~~~~~~~ 238 (721)
++|+|++|++..+||.+++|++...||+++..+.|.|.|+.++++++|++++....+.++.+.+... -++...+....
T Consensus 134 L~men~pefv~lWlGLaKlGv~tA~iNtNlR~~~LlHsi~~s~aralv~~~el~~~~~e~~~~l~~~~i~~~~~~~~~~- 212 (649)
T KOG1179|consen 134 LLMENRPEFVALWLGLAKLGVITAFINTNLRGEPLLHSITVSGARALVVGPELLNALEEILPLLIKNGIHVFSLGPTSV- 212 (649)
T ss_pred EecCCChhHHHHHHhHHhhCceeeeeccccccchhhhhhhhcCceEEEECHHHHHHHHhcchhhhhccceEEecCCCCC-
Confidence 9999999999999999999999999999999999999999999999999999988887764333221 12222222111
Q ss_pred ccCCccCCCCCceEeeHHHHHhcCCCCCCC------CCCCCCCCeEEEEeccCCCCCcchheeccHHHHHHHHHHHhhCC
Q 004977 239 KDSGVSGGISNWTVSSFSEVEKLGKRSPVD------PSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIP 312 (721)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~ 312 (721)
....+++...-+..+.. ....+-.++++.+|||||||.||+.++||..+......+...+
T Consensus 213 -------------~~g~~~L~~~l~~~~~~~vp~~~~~~~~~~s~~lyIYTSGTTGLPKaAvith~r~~~~a~g~~~~~- 278 (649)
T KOG1179|consen 213 -------------PDGIESLLAKLSAAPKHPVPVSTRSGLTFRSPLLYIYTSGTTGLPKAAVITHLRYLQGAAGFYYVF- 278 (649)
T ss_pred -------------CchHHHHHHhhcccccCCCCcccCCCccccceeEEEEcCCCCCCCHHHHHHHHHHHHHHHHHHHHh-
Confidence 11223333332222221 1334567899999999999999999999999999988888888
Q ss_pred CCCCCcEEEeccChHHHHHHHH-HHHHHHhcceEee---CccccccccchhhccCccCcceeecceEEeechHHHHHHHH
Q 004977 313 NPGRSDVYLAYLPLAHVLELAA-ESIMLCAGCAIGY---GSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVRE 388 (721)
Q Consensus 313 ~~~~~d~~l~~~pl~h~~g~~~-~~~~l~~G~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~ 388 (721)
+++++|+++..+|++|..+... +..++..|+|+++ ++...++++ ..++++|++.-+-.+.+.|++
T Consensus 279 g~~~~DvvY~~lPLYHsaa~ilGi~~~l~~GaT~VlrkKFSAS~FW~D-----------C~k~~~Tv~QYIGElcRYLl~ 347 (649)
T KOG1179|consen 279 GMTADDVVYTTLPLYHSAAGILGIGGCLLHGATVVLRKKFSASNFWDD-----------CRKYNVTVIQYIGELCRYLLN 347 (649)
T ss_pred CCCccceEEEcchhHHHHHHHHHHHHHHhcCceEEEecccchhhhHHH-----------HHHhCCeeeehHHHHHHHHHc
Confidence 9999999999999999988765 7789999999999 776666666 999999999999999999987
Q ss_pred HHHHHHHhhcchhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHHHHHHHh
Q 004977 389 GVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINIC 468 (721)
Q Consensus 389 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~~~~~ 468 (721)
......++. .++|.++ |..|.+++++.|.++
T Consensus 348 ~p~~~~er~-----------------------------------------------HkVRla~--GNGLR~diW~~Fv~R 378 (649)
T KOG1179|consen 348 QPPSPEERQ-----------------------------------------------HKVRLAY--GNGLRPDIWQQFVKR 378 (649)
T ss_pred CCCChhhcC-----------------------------------------------ceEEEEe--cCCCCchHHHHHHHH
Confidence 544332221 3677766 888999999999999
Q ss_pred hCCc-cccccccccccccccccCCCCCCCCccCCC------cCcceEEEEecCC-------CCcccCCCCCCcceEEE--
Q 004977 469 MGAP-IGQAYGLTETCAGSTFSEWDDPSVGRVGPP------VPCCYIKLVSWDE-------GGYKTSDKPMPRGEIVV-- 532 (721)
Q Consensus 469 ~g~~-l~~~YG~TE~~~~~~~~~~~~~~~~~vG~p------~p~~~v~i~d~~~-------~~~~~~~~~g~~GEl~v-- 532 (721)
||.+ +.+.||+||........ +.+.|.+|+- +--+++-=+|+++ .+.|..|++||.|.+.-
T Consensus 379 Fg~~~IgE~YgaTEgn~~~~N~---d~~vGA~G~~~~~~~~l~p~~LIk~D~~t~E~iRd~~G~Ci~~~~GEpGlLv~~i 455 (649)
T KOG1179|consen 379 FGIIKIGEFYGATEGNSNLVNY---DGRVGACGFMSRLLKLLYPFRLIKVDPETGEPIRDSQGLCIPCPPGEPGLLVGKI 455 (649)
T ss_pred cCCCeEEEEeccccCcceeeee---cCccccccchhhhhhhccceEEEEecCCCCceeecCCceEEECCCCCCceEEEEe
Confidence 9976 99999999987654433 3344444431 1112333334333 35556689999997653
Q ss_pred ccccc---cccccCCCcccccccccC--CCCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCc
Q 004977 533 GGFNV---TAGYFNNPGKTSEVYKVD--ERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSD 607 (721)
Q Consensus 533 ~g~~v---~~gY~~~~~~t~~~f~~~--~~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p 607 (721)
.-..- |.||.+++++|++....+ ..|+-||.|||+-.+|+.|+|||.+|..|++.++ ||||+..|||.+|....
T Consensus 456 ~~k~P~~~F~GY~g~~~~t~kKl~rDVFkkGD~~f~tGDlLv~D~~GylYF~DRtGDTFRWK-GENVsTtEVe~~l~~~~ 534 (649)
T KOG1179|consen 456 VQKNPLRSFLGYAGPKKATEKKLLRDVFKKGDVYFNTGDLLVADELGYLYFKDRTGDTFRWK-GENVSTTEVEDVLSALD 534 (649)
T ss_pred ccCCchhhhccccCchhhhhhhhHHhhhccCcEEEeeCcEEEEecCCcEEEeccCCCceeec-CCcccHHHHHHHHhhhc
Confidence 22233 889999888887765421 3466899999999999999999999999999997 99999999999999999
Q ss_pred ccceEEEEecCCCc----eEEEEEEcChHHHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEE
Q 004977 608 YVDNIMIHADPFHN----YCVALVVPSHKALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKI 683 (721)
Q Consensus 608 ~V~~~~V~g~~~~~----~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i 683 (721)
++.||.|+|+.-+. .-.|.|+.++... ...+.+-.+++ ..||+|.+|..+
T Consensus 535 ~~~dv~VYGV~VP~~EGRaGMAaI~~~p~~~-------------------------~d~~~l~~~l~-~~LP~YA~P~Fl 588 (649)
T KOG1179|consen 535 FLQDVNVYGVTVPGYEGRAGMAAIVLDPTTE-------------------------KDLEKLYQHLR-ENLPSYARPRFL 588 (649)
T ss_pred cccceeEEEEecCCccCccceEEEEecCccc-------------------------chHHHHHHHHH-hhCccccchHHH
Confidence 99999999975332 3556666554331 11356667777 899999999999
Q ss_pred EeeCCCCCCCCCccCcccccChHHHHHH
Q 004977 684 KLMPEPWTPEAGLVTAALKIKREQLKAK 711 (721)
Q Consensus 684 ~~~~~~~~p~~~~~t~~gKi~R~~l~~~ 711 (721)
.+.+++ . +|.|-|.++..|.+.
T Consensus 589 Rl~~~i--~----~TgTFKl~K~~L~~e 610 (649)
T KOG1179|consen 589 RLQDEI--E----KTGTFKLQKTELQKE 610 (649)
T ss_pred HHHhhh--h----cccchhhHHHHHHHc
Confidence 999998 4 899999999999765
No 117
>PRK08308 acyl-CoA synthetase; Validated
Probab=100.00 E-value=8e-57 Score=491.18 Aligned_cols=397 Identities=18% Similarity=0.156 Sum_probs=331.0
Q ss_pred EeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEC
Q 004977 130 WQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICD 209 (721)
Q Consensus 130 ~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~ 209 (721)
.+||+||.++++++|+.|. .|+++|++|+|+++|+++++++++||+++|++++|+++..+.+++..++++++++.++++
T Consensus 8 ~~ty~el~~~~~~~a~~l~-~~~~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~~~~~~~~~~~~~~i~~ 86 (414)
T PRK08308 8 EYSKSDFDLRLQRYEEMEQ-FQEAAGNRFAVCLKDPFDIITLVFFLKEKGASVLPIHPDTPKEAAIRMAKRAGCHGLLYG 86 (414)
T ss_pred eecHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCChHHHHHHHHHHHCCeEEEecCCCCCHHHHHHHHHhCCCCEEEec
Confidence 6999999999999999985 689999999999999999999999999999999999999999999999999999999997
Q ss_pred ccchhHHHhhhhcCCCccEEEEecCCCCCccCCccCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEeccCCCCC
Q 004977 210 SKQLKKLSAVSSSLKTIKNVIYFENDGSEKDSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGL 289 (721)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~ 289 (721)
+.... . . . .....++++++++|||||||.
T Consensus 87 ~~~~~---------------~----------------------~----------~----~~~~~~~~~~~i~~TSGtTG~ 115 (414)
T PRK08308 87 ESDFT---------------K----------------------L----------E----AVNYLAEEPSLLQYSSGTTGE 115 (414)
T ss_pred Ccccc---------------c----------------------c----------c----CCCCCCCCceEEEECCCCCCC
Confidence 63100 0 0 0 012346789999999999999
Q ss_pred cchheeccHHHHHHHHHHHhhCCCCCCCcEEEeccChHHHHHHHH-HHHHHHhcceEeeCccccccccchhhccCccCcc
Q 004977 290 PKGVMITHGNIVATAAAIKTLIPNPGRSDVYLAYLPLAHVLELAA-ESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDV 368 (721)
Q Consensus 290 PKgV~~sh~~l~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~i 368 (721)
||||++||+++.+.+......+ .+..+|+.+..+|++|.+++.. ++.++..|+++++.+.... ..++..+
T Consensus 116 PKgv~~s~~~l~~~~~~~~~~~-~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~~~~~--------~~~~~~l 186 (414)
T PRK08308 116 PKLIRRSWTEIDREIEAYNEAL-NCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVIITNKNP--------KFALNIL 186 (414)
T ss_pred CcEEEEehHhHHHHHHHHHHhh-CCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecCCCCH--------HHHHHHH
Confidence 9999999999999888888777 8889999999999999999855 7778999999988432211 1122338
Q ss_pred eeecceEEeechHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEE
Q 004977 369 SVLKPTLMAAVPAIFDRVREGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIR 448 (721)
Q Consensus 369 ~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr 448 (721)
+++++|+++++|+++..+.+.... ..+++
T Consensus 187 ~~~~~t~~~~~P~~~~~l~~~~~~---------------------------------------------------~~~l~ 215 (414)
T PRK08308 187 RNTPQHILYAVPLMLHILGRLLPG---------------------------------------------------TFQFH 215 (414)
T ss_pred HHhCCeEEEcCHHHHHHHHhcCCc---------------------------------------------------ccccc
Confidence 999999999999999988652100 02678
Q ss_pred EEEecCCCCCHHHHHHHHHhhCCccccccccccccccccccCCCCCCCCccCCCcCcceEEEEecCCCCcccCCCCCCcc
Q 004977 449 FMICGGAPLSADSQRFINICMGAPIGQAYGLTETCAGSTFSEWDDPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRG 528 (721)
Q Consensus 449 ~v~~gG~~l~~~~~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~G 528 (721)
.+++||+++++++.+.+++. +.++++.||+||++.++... .....+++|+|+|++++++.+ + .++.|
T Consensus 216 ~~~~~G~~l~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~--~~~~~~~~G~p~~~~~~~~~~-~---------~~~~g 282 (414)
T PRK08308 216 AVMTSGTPLPEAWFYKLRER-TTYMMQQYGCSEAGCVSICP--DMKSHLDLGNPLPHVSVSAGS-D---------ENAPE 282 (414)
T ss_pred EEEEccCCCCHHHHHHHHHh-CChhhhccCccccCCeeecC--CCCCCCccCccCCCeEEEEec-C---------CCCCc
Confidence 89999999999999988876 67999999999998644322 223457899999999999875 2 24679
Q ss_pred eEEEccccccccccCCCcccccccccCCCCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcc
Q 004977 529 EIVVGGFNVTAGYFNNPGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDY 608 (721)
Q Consensus 529 El~v~g~~v~~gY~~~~~~t~~~f~~~~~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~ 608 (721)
||++++. + +||+|||+|++|+||+++|+||.||+||+ +|++|+|.|||+++.++|+
T Consensus 283 el~v~~~---------------------~--~~~~TGDl~~~~~dg~l~~~GR~~~~ik~-~G~~v~p~eIE~~l~~~~~ 338 (414)
T PRK08308 283 EIVVKMG---------------------D--KEIFTKDLGYKSERGTLHFMGRMDDVINV-SGLNVYPIEVEDVMLRLPG 338 (414)
T ss_pred eEEEEcC---------------------C--ceEECCceEEECCCccEEEecccCCeEEE-CCEEECHHHHHHHHHhCCC
Confidence 9999642 3 79999999999999999999999999997 5999999999999999999
Q ss_pred cceEEEEecCCC---ceEEEEEEcChHHHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEe
Q 004977 609 VDNIMIHADPFH---NYCVALVVPSHKALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKL 685 (721)
Q Consensus 609 V~~~~V~g~~~~---~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~ 685 (721)
|.+|+|++.++. +.++++++..... + .++++++++ ++|+.|++|..+++
T Consensus 339 v~~a~v~~~~~~~~~~~~~~~v~~~~~~----------~-----------------~~~l~~~l~-~~l~~~~~P~~i~~ 390 (414)
T PRK08308 339 VQEAVVYRGKDPVAGERVKAKVISHEEI----------D-----------------PVQLREWCI-QHLAPYQVPHEIES 390 (414)
T ss_pred eeEEEEEeccCCCCCceEEEEEEeCCCC----------C-----------------HHHHHHHHH-HhCccccCCcEEEE
Confidence 999999998765 3577888765321 0 156778888 89999999999999
Q ss_pred eCCCCCCCCCccCcccccChHHHH
Q 004977 686 MPEPWTPEAGLVTAALKIKREQLK 709 (721)
Q Consensus 686 ~~~~~~p~~~~~t~~gKi~R~~l~ 709 (721)
++.+ | +|++||++|+.|+
T Consensus 391 v~~i--P----~t~~GKi~r~~~~ 408 (414)
T PRK08308 391 VTEI--P----KNANGKVSRKLLE 408 (414)
T ss_pred eccC--C----CCCCcCeehhhhh
Confidence 9988 6 9999999999653
No 118
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=100.00 E-value=5.9e-57 Score=493.62 Aligned_cols=406 Identities=32% Similarity=0.512 Sum_probs=316.8
Q ss_pred HHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEccCcHh
Q 004977 88 FEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVE 167 (721)
Q Consensus 88 ~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e 167 (721)
|+++|+++||++|+++ + ++ +++||+||+++++++|..|.++|+++||+|+|+++|+++
T Consensus 1 f~~~a~~~pd~~a~~~-~----------~~-----------~~~Ty~~l~~~v~~la~~L~~~g~~~~~~V~i~~~n~~~ 58 (417)
T PF00501_consen 1 FERQAQRYPDRIALID-D----------EG-----------RSLTYKQLYERVRKLAAALRKLGVKKGDRVAILLPNSIE 58 (417)
T ss_dssp HHHHHHHSTTSEEEEE-T----------TT-----------EEEEHHHHHHHHHHHHHHHHHTTSSTTSEEEEEESSSHH
T ss_pred ChhHHhhCCCceEEEE-C----------CC-----------EEEEHHHHHHHHHHHhhHHHHhCCCccccccccCCccce
Confidence 7899999999999986 1 22 489999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEE----CccchhHHHhhhhcCCCccEEEEecCCCCCccCCc
Q 004977 168 WFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLIC----DSKQLKKLSAVSSSLKTIKNVIYFENDGSEKDSGV 243 (721)
Q Consensus 168 ~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~----~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~ 243 (721)
++++++||+++|++++|++|.++.+++.++++.++++++|+ +......+............++.++......
T Consensus 59 ~~~~~~A~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 134 (417)
T PF00501_consen 59 FVVAFLACLRAGAIPVPLDPSLSEDELRHILRQSGPKVIITSEAVDSEPLKKLKSIFKQEDPSSSIIILDRDDLPK---- 134 (417)
T ss_dssp HHHHHHHHHHTT-EEEEEETTSSHHHHHHHHHHHTESEEEECHHHSCHHHHHHHHHHTTSTTTEEEEEESHSSCTT----
T ss_pred eeeeecccccccccccccccccccccccccccccceeEEEEeccccccccccchhhhccccccccccccccccccc----
Confidence 99999999999999999999999999999999999999997 2222233334434334445555555332111
Q ss_pred cCCCCCceEeeHHHHHhcCCCCCCCCCC-CCCCCeEEEEeccCCCCCcchheeccHHHHHHHHHHH--hhCCCCCCCcEE
Q 004977 244 SGGISNWTVSSFSEVEKLGKRSPVDPSL-PSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIK--TLIPNPGRSDVY 320 (721)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~--~~~~~~~~~d~~ 320 (721)
........... ... .. ..++++++++|||||||.||+|+++|+++++.+..+. ... +++ |++
T Consensus 135 ------~~~~~~~~~~~---~~~---~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~-~~~--d~~ 199 (417)
T PF00501_consen 135 ------KEALKSASLSD---EPQ---SPEDSPDDPAFILFTSGTTGKPKGVVLTHRNLLAQARALALPEYF-GLG--DRI 199 (417)
T ss_dssp ------CHHHHHHHHCH---CSH---STTHTTTSEEEEEEESSSSSSEEEEEEEHHHHHHHHHHHHHHHTT-TTT--TEE
T ss_pred ------ccccccccccc---ccc---cCCCCccceeEeecccccccccccccccccccccccccccccccc-ccC--ceE
Confidence 00000001000 000 00 0569999999999999999999999999999988864 223 334 699
Q ss_pred EeccChHHHHHH-HHHHHHHHhcceEeeCccccccccchhhccCccCcceeecceEEeechHHHHHHHHHHHHHHHhhcc
Q 004977 321 LAYLPLAHVLEL-AAESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKGG 399 (721)
Q Consensus 321 l~~~pl~h~~g~-~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~ 399 (721)
++++|++|.+++ ...+.++..|+++++.+.....+. ..++..++++++|+++++|++++.+.++.... ..
T Consensus 200 l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~-----~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~-~~--- 270 (417)
T PF00501_consen 200 LSFLPLSHIFGLISALLAALFSGATLVLPSPFDLFDP-----ESLLELISRYKPTILFAVPSMLEALLQSPEEK-TK--- 270 (417)
T ss_dssp EESS-TTSHHHHHHHHHHHHHCTSEEEEESSHHHHHH-----HHHHHHHHHHTESEEEEEHHHHHHHHHHHHTT-HH---
T ss_pred Eeecccccccccccccccccccccccccccccccccc-----ccchhccccccccccccccccccccccccccc-cc---
Confidence 999999999999 668899999999999664443111 11223389999999999999999997632111 00
Q ss_pred hhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHHHHHHHhhCC-ccccccc
Q 004977 400 LTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMGA-PIGQAYG 478 (721)
Q Consensus 400 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~~~~~~g~-~l~~~YG 478 (721)
.+....+++|.+++||+++++++.+.+++.++. ++++.||
T Consensus 271 ---------------------------------------~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i~~~YG 311 (417)
T PF00501_consen 271 ---------------------------------------ISKKDLSSLRTVISGGEPLPPDLLRRLRKAFGNAPIINLYG 311 (417)
T ss_dssp ---------------------------------------GTTTTGTT-SEEEEESST-CHHHHHHHHHHHTTSEEEEEEE
T ss_pred ---------------------------------------ccccccccccccccccccCChhhccccccccccccceeccc
Confidence 000122479999999999999999999999887 9999999
Q ss_pred cccccccccccC--CCCCCCCccCCCcCcceEEEEecCCCCcccCCCCCCcceEEEccccccccccCCCcccccccccCC
Q 004977 479 LTETCAGSTFSE--WDDPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVDE 556 (721)
Q Consensus 479 ~TE~~~~~~~~~--~~~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~~ 556 (721)
+||++.+++... ......+++|+|+|+++++|+|++++..++ +|+.|||+|+||+++.||+++|+.|.+.|. .
T Consensus 312 ~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~---~g~~Gei~i~~~~~~~gy~~~~~~~~~~~~--~ 386 (417)
T PF00501_consen 312 STETGSIATIRPPEDDIEKPGSVGKPLPGVEVKIVDPNTGEPLP---PGEPGEIVIRGPNVFSGYYNDPELTAEAFI--D 386 (417)
T ss_dssp EGGGSSEEEEEETTTHHSSTTSEBEESTTEEEEEECTTTSSBES---TTSEEEEEEESTTSBSEETTBHHHHHHHEE--T
T ss_pred ccccceeeeccccccccccccccccccccccccccccccccccc---ccccccccccCCccceeeeccccccccccc--c
Confidence 999999887553 222356899999999999999966577654 889999999999999999999999999996 4
Q ss_pred CCcceEeeCcEEEEccCCeEEEEecCCCeEEcC
Q 004977 557 RGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQ 589 (721)
Q Consensus 557 ~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~ 589 (721)
+ |||+|||+|++|+||+|+++||.||+||+|
T Consensus 387 ~--~~~~TGD~g~~d~~G~~~~~GR~~~~i~~~ 417 (417)
T PF00501_consen 387 D--GWYRTGDLGRLDEDGYLYILGRSDDMIKVR 417 (417)
T ss_dssp T--SEEEEEEEEEEETTSEEEEEEEGSCEEEET
T ss_pred c--cceecceEEEECCCCeEEEEEeeCCEEEeC
Confidence 4 799999999999999999999999999974
No 119
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=100.00 E-value=6.2e-53 Score=460.48 Aligned_cols=397 Identities=25% Similarity=0.295 Sum_probs=322.9
Q ss_pred eHHHHHHHHHHHHHHHHh-CCCCCCCEEEEEccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECc
Q 004977 132 TYGEVFDRACSFASGLVN-FGHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDS 210 (721)
Q Consensus 132 Ty~el~~~v~~lA~~L~~-~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~ 210 (721)
||+||.+.++++|+.|.+ .|+++||+|+++++|+++++++++||+++|++++|+++.++.+++.++++.+++++++++.
T Consensus 1 t~~~l~~~~~~~a~~l~~~~g~~~gd~v~l~~~n~~~~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~ii~~~ 80 (408)
T TIGR01733 1 TYRELDERANRLARHLRAAGGVGPGDRVAVLLERSAELVVAILAVLKAGAAYVPLDPAYPAERLAFILEDAGARLLLTDS 80 (408)
T ss_pred CHHHHHHHHHHHHHHHHHhhCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEEEcCCCCCHHHHHHHHHhcCCCEEEEcC
Confidence 799999999999999998 8999999999999999999999999999999999999999999999999999999999998
Q ss_pred cchhHHHhhhhcCCCccEEEEecCCCCCccCCccCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEeccCCCCCc
Q 004977 211 KQLKKLSAVSSSLKTIKNVIYFENDGSEKDSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLP 290 (721)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~P 290 (721)
.....+..... .++..... +...................+++++++|||||||.|
T Consensus 81 ~~~~~~~~~~~------~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTtG~p 135 (408)
T TIGR01733 81 ALASRLAGLVL------PIILVDPL-------------------ELAALDDAPAPPPPDAPSGPDDLAYVIYTSGSTGRP 135 (408)
T ss_pred chhhhccccCC------ceEEechh-------------------hhhhcccccccccccCCCCCCCcEEEEEcCCCCCCC
Confidence 76554432210 11111100 000000000000111124578999999999999999
Q ss_pred chheeccHHHHHHHHHHHhhCCCCCCCcEEEeccChHHHHHHHHHHHHHHhcceEeeCccccccccchhhccCccCccee
Q 004977 291 KGVMITHGNIVATAAAIKTLIPNPGRSDVYLAYLPLAHVLELAAESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSV 370 (721)
Q Consensus 291 KgV~~sh~~l~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 370 (721)
|+|.+||+++...+......+ .+.++|++++.+|++|.+++...+.++..|+++++.+...... ...+...+++
T Consensus 136 K~v~~s~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~-----~~~~~~~~~~ 209 (408)
T TIGR01733 136 KGVVVTHRSLVNLLAWLARRY-GLDPDDRVLQFASLSFDASVEEIFGTLLAGATLVVPPEDEERD-----AALLAALIAE 209 (408)
T ss_pred CEEEeccHHHHHHHHHHHHhc-CCCCCceEEEecCCccchhHHHHHHHHhCCCEEEEcChhhccC-----HHHHHHHHHH
Confidence 999999999999999888887 8889999999999999999988899999999999854433311 1222333788
Q ss_pred ecceEEeechHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEE
Q 004977 371 LKPTLMAAVPAIFDRVREGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFM 450 (721)
Q Consensus 371 ~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v 450 (721)
+++|.+.++|.+++.+.+... ...+++|.+
T Consensus 210 ~~~t~l~~~p~~~~~l~~~~~--------------------------------------------------~~~~~l~~v 239 (408)
T TIGR01733 210 HPVTVLNLTPSLLALLAAALP--------------------------------------------------PALASLRLV 239 (408)
T ss_pred cCceEEEeCHHHHHHHHHhhh--------------------------------------------------hcccCceEE
Confidence 899999999999999876422 012489999
Q ss_pred EecCCCCCHHHHHHHHHhhC-CccccccccccccccccccCCCCC-----CCCccCCCcCcceEEEEecCCCCcccCCCC
Q 004977 451 ICGGAPLSADSQRFINICMG-APIGQAYGLTETCAGSTFSEWDDP-----SVGRVGPPVPCCYIKLVSWDEGGYKTSDKP 524 (721)
Q Consensus 451 ~~gG~~l~~~~~~~~~~~~g-~~l~~~YG~TE~~~~~~~~~~~~~-----~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~ 524 (721)
++||+++++++.+.+.+.++ +.+++.||+||++.+++....... +..++|.|+++++++|+|+ ++.. ++.
T Consensus 240 ~~~g~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~-~~~~---~~~ 315 (408)
T TIGR01733 240 ILGGEALTPALVDRWRARGPGARLINLYGPTETTVWSTATLVDADDAPRESPVPIGRPLANTRLYVLDD-DLRP---VPV 315 (408)
T ss_pred EEeCccCCHHHHHHHHHhCCCcEEEecccCCceEEEEEEEEcCccccCCccccccCcccCCceEEEECC-CCCC---CCC
Confidence 99999999999999999887 899999999999987753322211 1678999999999999994 4554 457
Q ss_pred CCcceEEEccccccccccCCCcccccccccCC----CCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHH
Q 004977 525 MPRGEIVVGGFNVTAGYFNNPGKTSEVYKVDE----RGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVE 600 (721)
Q Consensus 525 g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~~----~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE 600 (721)
|+.|||+|+|++++.||+++++.|.+.|...+ ++..||+|||+|++|++|+++|.||.||+|++ +|++|+|.+||
T Consensus 316 g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~TGDl~~~d~~g~~~~~gR~~~~i~~-~G~~v~~~~ie 394 (408)
T TIGR01733 316 GVVGELYIGGPGVARGYLNRPELTAERFVPDPFAGGDGARLYRTGDLVRYLPDGNLEFLGRIDDQVKI-RGYRIELGEIE 394 (408)
T ss_pred CCceEEEecCccccccccCChhhhhcceeeCCCCCCCCceEEECCceEEEcCCCCEEEeeccCCEEEe-CeEEechHHHH
Confidence 89999999999999999999999998885321 21229999999999999999999999999997 69999999999
Q ss_pred HHHhcCcccceEEE
Q 004977 601 AALISSDYVDNIMI 614 (721)
Q Consensus 601 ~~l~~~p~V~~~~V 614 (721)
+++.+||.|.+|+|
T Consensus 395 ~~l~~~~~v~~~~v 408 (408)
T TIGR01733 395 AALLRHPGVREAVV 408 (408)
T ss_pred HHHhcCcchhhhcC
Confidence 99999999999875
No 120
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=3.9e-47 Score=406.65 Aligned_cols=323 Identities=25% Similarity=0.365 Sum_probs=257.9
Q ss_pred CCCCCCCeEEEEeccCCCCCcchheeccHHHHHHHHHHHhhCCCCCCCcEEEeccChHHHHHHHHHHHHHHhcceEeeCc
Q 004977 270 SLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNPGRSDVYLAYLPLAHVLELAAESIMLCAGCAIGYGS 349 (721)
Q Consensus 270 ~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~~~~~ 349 (721)
....++|+++|+|||||||.||||+++|+++.+.+......+ ...++++..+|++|.+++...+.++..|+++++.+
T Consensus 30 ~~~~~~d~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~---~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~v~~~ 106 (358)
T PRK07824 30 GEPIDDDVALVVATSGTTGTPKGAMLTAAALTASADATHDRL---GGPGQWLLALPAHHIAGLQVLVRSVIAGSEPVELD 106 (358)
T ss_pred CCCCCCCeEEEEeCCCCCCCCCEEEecHHHHHHHHHHHHhcc---CCCCeEEEECChHHHHHHHHHHHHHHcCCeEEecC
Confidence 345578999999999999999999999999998887665543 35578999999999999987888899999887632
Q ss_pred cccccccchhhccCccCcceeec--ceEEeechHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHhhhccccccCCch
Q 004977 350 TLTMTDTSSKIKKGTKGDVSVLK--PTLMAAVPAIFDRVREGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLE 427 (721)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~i~~~~--~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 427 (721)
.....+. ..+...+++++ .++...+|..+..+..+...
T Consensus 107 ~~~~~~~-----~~~~~~i~~~~~~~~~~~~~p~~l~~~~~~~~~----------------------------------- 146 (358)
T PRK07824 107 VSAGFDP-----TALPRAVAELGGGRRYTSLVPMQLAKALDDPAA----------------------------------- 146 (358)
T ss_pred cCCCcCH-----HHHHHHHHHhCCCceEEEecHHHHHHHHhCccc-----------------------------------
Confidence 2111111 11223377776 56667788877665432100
Q ss_pred hhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHHHHHHHhhCCccccccccccccccccccCCCCCCCCccCCCcCcce
Q 004977 428 RMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMGAPIGQAYGLTETCAGSTFSEWDDPSVGRVGPPVPCCY 507 (721)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~p~~~ 507 (721)
....+++|.+++||+++++++.+.+.+ +++++++.||+||++..+. ..|+|+++++
T Consensus 147 -------------~~~~~~l~~i~~gG~~l~~~~~~~~~~-~~~~v~~~YG~TE~~~~~~----------~~G~~~~g~~ 202 (358)
T PRK07824 147 -------------TAALAELDAVLVGGGPAPAPVLDAAAA-AGINVVRTYGMSETSGGCV----------YDGVPLDGVR 202 (358)
T ss_pred -------------cCCcccceEEEECCCCCCHHHHHHHHh-cCCcEEecccCCccCCCcC----------cCceeCCCCE
Confidence 001148999999999999999988876 5999999999999875432 3689999999
Q ss_pred EEEEecCCCCcccCCCCCCcceEEEccccccccccCCCcccccccccCCCCcceEeeCcEEEEccCCeEEEEecCCCeEE
Q 004977 508 IKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVK 587 (721)
Q Consensus 508 v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~~~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik 587 (721)
++|.| |||+++|+.++.||+++++.+ .|. .+ |||+|||+|++ ++|.|+|+||.||+||
T Consensus 203 v~i~~---------------Gei~v~g~~~~~gY~~~~~~~--~~~--~~--g~~~TGDl~~~-~~g~l~i~GR~~d~i~ 260 (358)
T PRK07824 203 VRVED---------------GRIALGGPTLAKGYRNPVDPD--PFA--EP--GWFRTDDLGAL-DDGVLTVLGRADDAIS 260 (358)
T ss_pred EEecC---------------CEEEEecCccccccCCCcccc--ccc--CC--CceecccEEEE-eCCEEEEEeccCCeEE
Confidence 99843 899999999999999988754 343 45 79999999999 8999999999999999
Q ss_pred cCCeeeeechHHHHHHhcCcccceEEEEecCCC---ceEEEEEEcChHHHHHHHHHhCCCcccHHHHhccHHHHHHHHHH
Q 004977 588 LQHGEYISLGKVEAALISSDYVDNIMIHADPFH---NYCVALVVPSHKALEKWAHEASIKYEDLSELCNKAEAVNEVQQA 664 (721)
Q Consensus 588 ~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 664 (721)
+ +|++|+|.+||++|.+||+|.+|+|++.+++ +.++|+|+...+. . ...++
T Consensus 261 ~-~G~~v~p~eIE~~l~~~~~V~~~~vv~~~~~~~g~~~~a~v~~~~~~----------~---------------~~~~~ 314 (358)
T PRK07824 261 T-GGLTVLPQVVEAALATHPAVADCAVFGLPDDRLGQRVVAAVVGDGGP----------A---------------PTLEA 314 (358)
T ss_pred E-CCEEECHHHHHHHHHhCCCcceEEEEecCCCCCceEEEEEEEeCCCC----------C---------------cCHHH
Confidence 7 6999999999999999999999999998765 3588888765421 0 11367
Q ss_pred HHHHHHHCCCCCcccccEEEeeCCCCCCCCCccCcccccChHHHHHHHHH
Q 004977 665 LSKVAKAAKLDKFEIPAKIKLMPEPWTPEAGLVTAALKIKREQLKAKFKD 714 (721)
Q Consensus 665 l~~~~~~~~L~~~~~P~~i~~~~~~~~p~~~~~t~~gKi~R~~l~~~~~~ 714 (721)
|+++++ ++|+.|++|..|++++++ | +|++||++|++|+++|.+
T Consensus 315 i~~~~~-~~l~~~~~P~~i~~v~~l--P----~t~~GKi~r~~L~~~~~~ 357 (358)
T PRK07824 315 LRAHVA-RTLDRTAAPRELHVVDEL--P----RRGIGKVDRRALVRRFAG 357 (358)
T ss_pred HHHHHH-hhCccccCCCEEEEecCC--C----CCCCccccHHHHHHHhhc
Confidence 888888 899999999999999987 6 999999999999999865
No 121
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=4.3e-44 Score=413.30 Aligned_cols=437 Identities=23% Similarity=0.283 Sum_probs=346.0
Q ss_pred ccCCCCCCCCCCccccccCCCCccccccCCCCCCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcE
Q 004977 50 QRGVPVEVGGEPGYAIRNAQIPELVEVPWKGASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYE 129 (721)
Q Consensus 50 ~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~ 129 (721)
+..++++...++ +. .+ . ...+.+...++++.|.+++.+.|++.|+.. .+ .
T Consensus 202 ~~~l~ll~~~e~-~~-~~-~----~~~~~~~~~~i~~~f~~~a~~~p~~~a~~~------------~~-----------~ 251 (642)
T COG1020 202 LSALPLLLPSER-EV-WN-A----LAAPIPLRLTIHLLFEEQAATTPDAVALVR------------GG-----------Q 251 (642)
T ss_pred cccCCCCCHHHH-hh-cc-c----cccCCCccchHHHHHHHHHHhCCCceeEec------------CC-----------C
Confidence 666777777777 11 11 2 223334457999999999999999999875 22 2
Q ss_pred EeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEC
Q 004977 130 WQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICD 209 (721)
Q Consensus 130 ~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~ 209 (721)
.+||+|+..+++++|+.|.+.|+.++++|+++++++++++++++|++++|+.++|+++.++.+++.+++++++++.+++.
T Consensus 252 ~lty~el~~~a~~la~~l~~~g~~~~~~V~i~~~rs~~~i~~~l~ilkaG~~yvP~d~~~P~~r~~~~l~~~~~~~~~~~ 331 (642)
T COG1020 252 QLTYAELDARANRLARLLISLGVGPGETVAILADRSLELVVALLAVLKAGAAYVPLDPLYPAERLAYILEDSRPTLLLTQ 331 (642)
T ss_pred cccHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCCHHHHHHHHHHHhcCCeEecCCCCChHHHHHHHHhhcCccEEEec
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ccchhHHHhhhhcCCCccEEEEecCCCCCccCCccCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEeccCCCCC
Q 004977 210 SKQLKKLSAVSSSLKTIKNVIYFENDGSEKDSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGL 289 (721)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~ 289 (721)
........ .++. +..+... .......+. .....+++.+|++|||||||.
T Consensus 332 ~~~~~~~~----~~~~----~~~~~~~----------------------~~~~~~~~~-~~~~~~~~~ayiiytsgstg~ 380 (642)
T COG1020 332 AHLRVDDV----GLPG----LALDDAL----------------------SEIPDTDPI-PQALLGDALAYIIYTSGSTGQ 380 (642)
T ss_pred cccccccc----cCCc----ccccccc----------------------ccCCccCcc-cccCCCCCeEEEEEccCCCCC
Confidence 33221100 0110 1100000 000000000 123456899999999999999
Q ss_pred cchheeccHHHHHHHHHHHhhCCCCCCCcEEEeccChHHHHHHHHHHHHHHhcceEeeCccccccccchhhccCccCcce
Q 004977 290 PKGVMITHGNIVATAAAIKTLIPNPGRSDVYLAYLPLAHVLELAAESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVS 369 (721)
Q Consensus 290 PKgV~~sh~~l~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~ 369 (721)
||||+++|+++.+...+....+ .++..|+++...++.++.+...++.++..|+++++.......+... +...+.
T Consensus 381 Pkgv~~~h~~~~~~~~~~~~~~-~~~~~d~~l~~~s~~fD~~~~~~f~~l~~G~~l~~~~~~~~~~~~~-----l~~~~~ 454 (642)
T COG1020 381 PKGVRIEHRALANLLNDAGARF-GLDADDRVLALASLSFDASVFEIFGALLEGARLVLAPALLQVDPAA-----LLELLE 454 (642)
T ss_pred CCCceecCHHHHHHHHHHHHhc-CCCcccEEeecCCcccchhHHHHHHHHhCCCEEEecCccccCCHHH-----HHHHHH
Confidence 9999999999999888888887 9999999999999999999999999999999999966655554422 223378
Q ss_pred eecceEEeechHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEE
Q 004977 370 VLKPTLMAAVPAIFDRVREGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRF 449 (721)
Q Consensus 370 ~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~ 449 (721)
++++|++..+|.++..+.......... ...+.+|.
T Consensus 455 ~~~vt~~~~~p~~~~~~~~~~~~~~~~---------------------------------------------~~~~~lr~ 489 (642)
T COG1020 455 AQGITVLLLVPLLLRLLLLAALAPDLI---------------------------------------------SPCERLRQ 489 (642)
T ss_pred HcCCEEEEecHHHHHHHHhchhhcccc---------------------------------------------CCcccccE
Confidence 899999999999999887631100000 00024899
Q ss_pred EEecCCCCCHHHHHHHHHhh--CCccccccccccccccccccCCCCCC--CCccCCCcCcceEEEEecCCCCcccCCCCC
Q 004977 450 MICGGAPLSADSQRFINICM--GAPIGQAYGLTETCAGSTFSEWDDPS--VGRVGPPVPCCYIKLVSWDEGGYKTSDKPM 525 (721)
Q Consensus 450 v~~gG~~l~~~~~~~~~~~~--g~~l~~~YG~TE~~~~~~~~~~~~~~--~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g 525 (721)
+++||+.++..+...+.... ...+.|.||+||++..++........ ..++|+|++|+.++|+| +.+.. ++.|
T Consensus 490 ~~~gGe~l~~~~~~~~~~~~~~~~~l~~~ygpTe~~~~~~~~~~~~~~~~~~piG~p~~n~~~~ild-~~~~~---~p~g 565 (642)
T COG1020 490 LLSGGEALPLALVQRLLQLAALARRLLNLYGPTEATLDAPSFPISAELESRVPIGRPVANTQLYILD-QGLRP---LPLG 565 (642)
T ss_pred EEEcCCCCCHHHHHHHHHhccccceEeeccCccHHhhheeeEEcccccCCCCCcceeeCCCeEEEEC-CCCCc---CCCC
Confidence 99999999999988776654 46899999999977766554433322 35899999999999998 55554 4578
Q ss_pred CcceEEEccccccccccCCCcccccccccCCCCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhc
Q 004977 526 PRGEIVVGGFNVTAGYFNNPGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALIS 605 (721)
Q Consensus 526 ~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~~~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~ 605 (721)
..||+++.|.++++||+++|+.|.+.|. .+ ++|+|||+++++.||.+.++||.|+++|++ |++|+++|||..+.+
T Consensus 566 v~gel~i~g~~~a~gy~~~p~lt~~~f~--~~--~~y~tgD~~r~~~dg~~e~lgr~D~qvki~-g~Riel~eie~~l~~ 640 (642)
T COG1020 566 VPGELYIAGLGLALGYLNRPDLTAERFI--AL--RLYRTGDLARPLADGALEYLGRKDSQVKIR-GFRIELGEIEAALAE 640 (642)
T ss_pred CCeeeEECCcchhhhhcCChhhhHHHhh--hc--cCccCCCeeeECCCCeEEEeccccceeEec-eEecCcHHHHHHHhc
Confidence 8899999999999999999999999997 44 499999999999999999999999999996 999999999999988
Q ss_pred Cc
Q 004977 606 SD 607 (721)
Q Consensus 606 ~p 607 (721)
+|
T Consensus 641 ~~ 642 (642)
T COG1020 641 QP 642 (642)
T ss_pred CC
Confidence 75
No 122
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=100.00 E-value=7.9e-39 Score=340.65 Aligned_cols=288 Identities=20% Similarity=0.181 Sum_probs=220.1
Q ss_pred CCeEEEEeccCCCCCcchheeccHHHHHHHHHHHhhCCCCC--CCcEEEeccChHHHHHHHH-HHHHHHhcceEeeCccc
Q 004977 275 NGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNPG--RSDVYLAYLPLAHVLELAA-ESIMLCAGCAIGYGSTL 351 (721)
Q Consensus 275 ~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~--~~d~~l~~~pl~h~~g~~~-~~~~l~~G~~~~~~~~~ 351 (721)
+..++++|||||||.||||++||+++.+.+..+...+ ++. +.|++++.+|++|.+++.. .+.++..|+++++....
T Consensus 95 ~~~~~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~-~~~~~~~dr~l~~~Pl~h~~g~~~~~l~~l~~G~~vv~~~~~ 173 (386)
T TIGR02372 95 PTARFTFATSGSTGTPKPVTHSWAALLSEAQAIAKIL-GERPPPVRRVISCVPAHHLYGFLFSCLLPSRRGLEAKQLAAA 173 (386)
T ss_pred CCceEEEECCCCCCCCceeEeeHHHHHHHHHHHHHHh-CcCCCCCCeEEEeCCcHHHHHHHHHHHHHHHCCCeEEecCCC
Confidence 4468999999999999999999999999888877766 554 3468999999999999754 67788899999874322
Q ss_pred cccccchhhccCccCcceeecceEEeechHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHhhhccccccCCchhhhH
Q 004977 352 TMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLW 431 (721)
Q Consensus 352 ~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (721)
..... +..++. .|+++++|++++.+.+..
T Consensus 174 ~~~~~--------l~~i~~--~t~~~~~P~~l~~l~~~~----------------------------------------- 202 (386)
T TIGR02372 174 PASGI--------MRHARP--GDLIVGTPFIWEQLADLD----------------------------------------- 202 (386)
T ss_pred ChHHH--------HHhhcc--CCEEEECcHHHHHHHhhC-----------------------------------------
Confidence 11111 111332 389999999999886520
Q ss_pred HHHHHHHHHHHhCCcEEEEEecCCCCCHHHHHHHHHhhCC-ccccccccccccccccccCCCCCCCCccCCCcCcceEEE
Q 004977 432 DAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMGA-PIGQAYGLTETCAGSTFSEWDDPSVGRVGPPVPCCYIKL 510 (721)
Q Consensus 432 ~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~~~~~~g~-~l~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~p~~~v~i 510 (721)
...++++. ++||+++++++.+.+.+. +. .++++||+||++++++... .+..|+|+|++++++
T Consensus 203 ----------~~l~slr~-i~gGa~l~~~l~~~~~~~-g~~~v~~~YG~TEt~~i~~~~~-----~~~~~~~~p~~~~~~ 265 (386)
T TIGR02372 203 ----------YRLPGVVG-VSSGAPSTAATWRCLLAA-GLARLLEVYGATETGGIGLREA-----PDDPFRLLPDLACFA 265 (386)
T ss_pred ----------cCCCccee-EecCCCCCHHHHHHHHHh-cccchhheeccccccccccccC-----CCCCcccCCCccccC
Confidence 00135675 688999999999888875 64 6999999999987554321 234677888766543
Q ss_pred EecCCCCcccCCCCCCcceEEEccccccccccCCCcccccccccCCCCcceEeeCcEEEEccCCeEEEEecCCCeEEcCC
Q 004977 511 VSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQH 590 (721)
Q Consensus 511 ~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~~~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~ 590 (721)
+ ++. + .| +. .|++|||+|++|++|+|+|+||+||+||+ +
T Consensus 266 -~--~~~-----------~---~g---------------------~~--~~~~tgD~g~~d~~G~l~i~GR~dd~Ik~-~ 304 (386)
T TIGR02372 266 -D--TLS-----------S---AG---------------------LA--RRLDLQDRLAWDKDGGFTILGRKDEILQV-G 304 (386)
T ss_pred -C--Ccc-----------C---CC---------------------cc--ceeecCceEEEcCCCcEEEecccCCEEEE-C
Confidence 1 110 0 01 11 48999999999999999999999999997 6
Q ss_pred eeeeechHHHHHHhcCcccceEEEEecCCCceEEEEEEcChHHHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHH
Q 004977 591 GEYISLGKVEAALISSDYVDNIMIHADPFHNYCVALVVPSHKALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAK 670 (721)
Q Consensus 591 G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 670 (721)
|++|+|.+||++|.+||+|.+|+|... ...+.|+|+++++.. . ..+.++|+++++
T Consensus 305 G~~V~p~eIE~~l~~~p~V~~~~v~~~--g~~~~a~vv~~~~~~--------------------~---~~~~~~l~~~~~ 359 (386)
T TIGR02372 305 GVNVSPGHVRDILERNPRVRAAAVRLD--GRRLKAFIVVAEDAD--------------------E---AELEIELRATAA 359 (386)
T ss_pred CEEEcHHHHHHHHHcCCCceEEEEEcC--CceEEEEEEECCCCC--------------------h---HHHHHHHHHHHH
Confidence 999999999999999999999999753 457889998774320 0 123467888888
Q ss_pred HCCCCCcccccEEEeeCCCCCCCCCccCcccccC
Q 004977 671 AAKLDKFEIPAKIKLMPEPWTPEAGLVTAALKIK 704 (721)
Q Consensus 671 ~~~L~~~~~P~~i~~~~~~~~p~~~~~t~~gKi~ 704 (721)
++|+.|++|..+.+++++ | +|++||++
T Consensus 360 -~~L~~~~~P~~i~~~~~l--P----~t~~GKi~ 386 (386)
T TIGR02372 360 -RHLPAPARPDRFRFGTEL--P----RTGAGKLA 386 (386)
T ss_pred -HhCCCCCCCcEEEEcccC--C----CCCCCCcC
Confidence 899999999999999998 6 99999985
No 123
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=100.00 E-value=4.4e-34 Score=312.05 Aligned_cols=329 Identities=16% Similarity=0.168 Sum_probs=227.0
Q ss_pred CCCCeEEEEeccCCCCCcchheeccHHHHHHHHHHH---hhCCCCCCCcEEEeccChHHHHH-HHHHHHHHHhcceEeeC
Q 004977 273 SQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIK---TLIPNPGRSDVYLAYLPLAHVLE-LAAESIMLCAGCAIGYG 348 (721)
Q Consensus 273 ~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~---~~~~~~~~~d~~l~~~pl~h~~g-~~~~~~~l~~G~~~~~~ 348 (721)
+.+++++++|||||||.||+|.+||+++........ ..+ ++.++|++++..++.+..+ +...+.++..|++++..
T Consensus 73 ~~~~~~~~~~TSGTTG~Pk~v~~t~~~~~~~~~~~~~~~~~~-g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 151 (422)
T TIGR02155 73 PREQVVRIHASSGTTGKPTVVGYTQNDIDTWSSVVARSIRAA-GGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPI 151 (422)
T ss_pred ChHHcEEEEECCCCCCCCeEeccCHHHHHHHHHHHHHHHHHc-CCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEec
Confidence 456889999999999999999999999876644332 234 7888999988766544322 33345567788888764
Q ss_pred ccccccccchhhccCccCcceeecceEEeechHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHhhhccccccCCchh
Q 004977 349 STLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLER 428 (721)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 428 (721)
+.... ..++..|++++||+++++|+++..|++........
T Consensus 152 ~~~~~--------~~~~~~i~~~~~t~l~~~Ps~l~~L~~~~~~~~~~-------------------------------- 191 (422)
T TIGR02155 152 SGGQT--------EKQVQLIQDFKPDIIMVTPSYMLNLLEELKRMGID-------------------------------- 191 (422)
T ss_pred CCCCH--------HHHHHHHHHHCCCEEEEcHHHHHHHHHHHHHcCCC--------------------------------
Confidence 33211 11233399999999999999999987643211000
Q ss_pred hhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHHHHHHHhhCCccccccccccccccccccCCCCCCCCccCCCc--Ccc
Q 004977 429 MLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMGAPIGQAYGLTETCAGSTFSEWDDPSVGRVGPPV--PCC 506 (721)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~--p~~ 506 (721)
....++|.+++||+++++++.+.+++.+|+++++.||+||+++......... ...|.++ +++
T Consensus 192 -------------~~~~~lr~i~~~ge~l~~~~~~~i~~~~g~~v~~~YG~tE~~~~~~~~~~~~---~~~g~~~~~~~~ 255 (422)
T TIGR02155 192 -------------PAQTSLQVGIFGAEPWTNAMRKEIEARLGMKATDIYGLSEVIGPGVAMECVE---TQDGLHIWEDHF 255 (422)
T ss_pred -------------cccCceEEEEEeCCcCCHHHHHHHHHHhCCceEecccchhhcCCceeecccc---cCCCceEecCee
Confidence 0013799999999999999999999999999999999999853211111101 1224444 357
Q ss_pred eEEEEecCCCCcccCCCCCCcceEEEccccccccccCCCcccccccccCCCCcceEeeCcEEEEccC-C-----eEEEEe
Q 004977 507 YIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVDERGMCWFYTGDIGQVYPD-G-----CLEIID 580 (721)
Q Consensus 507 ~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~~~g~gw~~TGDlg~~d~d-G-----~l~i~G 580 (721)
.++|+|++++..+ ++|+.|||++++. +++.| +. +||+|||+++++++ | .++|.|
T Consensus 256 ~~eivd~~~g~~v---~~Ge~Gelvvt~~------------~~~~~---p~--~ry~TGDl~~~~~~~Gr~~~~~~~i~G 315 (422)
T TIGR02155 256 YPEIIDPHTGEVL---PDGEEGELVFTTL------------TKEAL---PV--IRYRTRDLTRLLPGTARTMRRMDRITG 315 (422)
T ss_pred EEEEECCCCCCCC---CCCCeeEEEEecC------------Ccccc---ce--eeEEcCcEEEEECCCCCcccccccccC
Confidence 7889996666654 4889999999863 34455 56 89999999999876 4 478999
Q ss_pred cCCCeEEcCCeeeeechHHHHHHhcCcccceEEEEecCCC---ceEEEEEEcChHHHHHHHHHhCCCcccHHHHhccHHH
Q 004977 581 RKKDIVKLQHGEYISLGKVEAALISSDYVDNIMIHADPFH---NYCVALVVPSHKALEKWAHEASIKYEDLSELCNKAEA 657 (721)
Q Consensus 581 R~~d~ik~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 657 (721)
|.||+||++ |++|+|.+||++|.+||+|...+++..... +.+.+.|++.++.. .. ..++.
T Consensus 316 R~~d~i~~~-G~~v~p~eie~~l~~~~~v~~~~q~~~~~~~~~~~~~~~v~~~~~~~--------~~--------~~~~~ 378 (422)
T TIGR02155 316 RSDDMLIIR-GVNVFPTQLEEVILKMDELSPHYQLELTRNGHMDELTLKVELKPESY--------TL--------RLHEQ 378 (422)
T ss_pred ccCCeEEEC-CEEECHHHHHHHHHhCcCcCCCEEEEEEcCCCccEEEEEEEEecCcc--------cc--------cchHH
Confidence 999999985 999999999999999999984333332222 35666666653220 00 01112
Q ss_pred HHHHHHHHHHHHHHCCCCCcccccEEEeeC--CCCCCCCCccCcccccChH
Q 004977 658 VNEVQQALSKVAKAAKLDKFEIPAKIKLMP--EPWTPEAGLVTAALKIKRE 706 (721)
Q Consensus 658 ~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~--~~~~p~~~~~t~~gKi~R~ 706 (721)
...+.++|++.++ .++..+. .|.++. ++ | +|+ ||++|.
T Consensus 379 ~~~~~~~i~~~~~-~~~~~~~---~v~~~~~~~l--p----~~~-GK~~~~ 418 (422)
T TIGR02155 379 ASLLAGEIQHTIK-QEVGVSM---DVHLVEPGSL--P----RSE-GKARRV 418 (422)
T ss_pred HHHHHHHHHHHHH-hccCcEE---EEEEECCCCc--c----CCC-CCceEE
Confidence 2344567777777 6776552 455553 45 5 888 999874
No 124
>KOG1178 consensus Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.97 E-value=3.3e-31 Score=299.20 Aligned_cols=506 Identities=18% Similarity=0.201 Sum_probs=321.3
Q ss_pred CCCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEE
Q 004977 81 ASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAI 160 (721)
Q Consensus 81 ~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i 160 (721)
+-++...|++.+.+.|++.+..+-...+ . .+.....||++....++.+++.|...|...|+.|++
T Consensus 35 ~g~~~~~~~~~~~~~~~~~~~~~~p~~~---------~------~~~i~~~t~r~~~~~~n~~~q~l~~~~~~~~~~v~i 99 (1032)
T KOG1178|consen 35 MGTLEDSFRRELAEAPENTGHVIIPTAS---------E------SGIIDSFTYRLIRLLSNIIAQFLVSLGSLRGTTVAI 99 (1032)
T ss_pred hcchhhHHHHHHhhcccCCCceEeeccc---------c------cccccchhhhhhhcccchhHHHhhhcccccCceEEE
Confidence 3578889999999999999987643210 0 223346899999999999999999999999999999
Q ss_pred EccCcHhHHHHHHHHHhcCCEEEEecCCCC----HH---HHHHHHHhcCceEEEECccchhHHHhhhh-cCCCccEEEEe
Q 004977 161 LAETCVEWFIAFQGCFRQSITVVTIYSSLG----ED---ALIHSLNETQVTTLICDSKQLKKLSAVSS-SLKTIKNVIYF 232 (721)
Q Consensus 161 ~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~----~~---~l~~~l~~~~~~~vi~~~~~~~~~~~~~~-~~~~~~~ii~~ 232 (721)
++..+.++++..++++++|..+++++|.++ ++ ++++.+......++.- .+.+..... ..+
T Consensus 100 ~~~~~~d~~v~v~~~~~~g~~~~~idp~~~~~e~~~~~~~ia~~~~s~~~~i~~~----l~i~~~~~~~~~~-------- 167 (1032)
T KOG1178|consen 100 YMLPSVDLVVSVFAVLAAGLTFLPIDPSWPNSELAGYLMRIAHFLTSVELEIVRR----LNIIDILLNSLFP-------- 167 (1032)
T ss_pred eccCcCCeeeeeeehhhcceEEEEecCCCcccccchHHHhhhhhheeccceehhh----hhhHHHHhhcccc--------
Confidence 999999999999999999999999999999 22 1222111111111100 000000000 000
Q ss_pred cCCCCCccCCccCCCCCceEeeHHH-HHhcCCC-CCCCCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHHHHHHHhh
Q 004977 233 ENDGSEKDSGVSGGISNWTVSSFSE-VEKLGKR-SPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTL 310 (721)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~ 310 (721)
...+....+ +...... .........+|..+++.||||+||.||+|.-+|..+.+...++...
T Consensus 168 ----------------~~sv~~~~~~f~~~~~~~~~r~~~~~~~ds~~~l~~tSgs~G~pk~v~~~~~sl~~~fdw~~~~ 231 (1032)
T KOG1178|consen 168 ----------------KLSVETIADSFQMVLHNEDTREIRVGGNDSTALLSFTSGSTGVPKGVAGTHFSLANAFDWMFTT 231 (1032)
T ss_pred ----------------ccchhhccchhhhhhccCCCcceeeecccccceEeecccccccccccchhHHHHHhhhhhcccc
Confidence 001111111 1111111 1111134456778999999999999999999999999999999888
Q ss_pred CCCCCCCcEEEeccCh-HHHHHHHHHHHHHHhcceEeeCccccccccchhhccCccCcceeecceEEeechHHHHHHHHH
Q 004977 311 IPNPGRSDVYLAYLPL-AHVLELAAESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREG 389 (721)
Q Consensus 311 ~~~~~~~d~~l~~~pl-~h~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~ 389 (721)
+ .++.++++-..... +++.-.......|+.|..+..+.+..- +. +..+...+++++++..+.+|++.++++..
T Consensus 232 f-~~t~s~~~~~~~~~~~~d~i~~~~~~~L~~~~~l~~p~~~~~-~~----~~~l~~~le~y~i~~~~~~~a~~~~l~~~ 305 (1032)
T KOG1178|consen 232 F-PPTGSDRFTFKTSVYFDDTIQKFIGALLFNGNNLLVPTATIK-DT----PGQLASTLERYGITVSHLLPAMCQLLLAI 305 (1032)
T ss_pred C-CcCccchhhhhheeecccchHHHHhhHhhcCceeecccccCc-cc----hhhHHHHHHhhhheeeeechhhhhhhhhh
Confidence 8 77777765222222 222222223455666666655322211 10 11223338999999999999999888753
Q ss_pred HHHHHHhhcchhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHh--CCcEEEEEecCCCCCHHHHH-HHH
Q 004977 390 VVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVL--GGRIRFMICGGAPLSADSQR-FIN 466 (721)
Q Consensus 390 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~lr~v~~gG~~l~~~~~~-~~~ 466 (721)
....... + .+ ...+ .+.. -+.|+...++|++....+.. .+.
T Consensus 306 ~~~~~~~-------l-----~~-~~~~-----------------------~dl~~~~~~Lkl~~~~~ep~~v~l~~s~~~ 349 (1032)
T KOG1178|consen 306 LTTSLPL-------L-----EH-AFSL-----------------------SDLLTKRSCLKLVVLGGEPLLVSLYTSTFD 349 (1032)
T ss_pred cCcchhh-------h-----hh-hhhc-----------------------ccccccchhheeeeecCCccchhhhhhhhh
Confidence 2211000 0 00 0000 0000 04789999999999999866 443
Q ss_pred HhhCCccccccccccccccccccCCCCCCC----C----------ccCCCcCcceEEEEecCCCCcccCCCCCCc----c
Q 004977 467 ICMGAPIGQAYGLTETCAGSTFSEWDDPSV----G----------RVGPPVPCCYIKLVSWDEGGYKTSDKPMPR----G 528 (721)
Q Consensus 467 ~~~g~~l~~~YG~TE~~~~~~~~~~~~~~~----~----------~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~----G 528 (721)
.+.-.-...-|+.++.....+......... . .+|.+. -+.+.. ..++.. +.++. |
T Consensus 350 ~~~~~~~~~~y~s~~~~~~~s~~~~~~s~~ll~~~~v~~~p~~~~~~~~~~---~~~~~~-~~~~~~---~~~v~~~~l~ 422 (1032)
T KOG1178|consen 350 LLAEIFFGLPYLSTDPTGLVSYDDFSPSKVLLTNENVYSVPKFDSIIGSLT---VLESLY-RAGGEG---EGGVGKGCLG 422 (1032)
T ss_pred cccceeeeecccCCCCccceeHHhhCcccceecceeEEeccchhhccCCCc---ceeeee-ccCccc---CCcccceeec
Confidence 333222333488888877666544322211 1 112111 112221 111111 11111 1
Q ss_pred eEEEccccccccccCCCccccccccc-CCCCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCc
Q 004977 529 EIVVGGFNVTAGYFNNPGKTSEVYKV-DERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSD 607 (721)
Q Consensus 529 El~v~g~~v~~gY~~~~~~t~~~f~~-~~~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p 607 (721)
+.+..+..+..| ++.++.....+.. +..-++.|+|||+|+.-++|.+.|.||.|++||++ |.|+.++||+.++..||
T Consensus 423 ~~~~~~~~~~~g-~~~~~~~~~~~~~~d~~~~r~y~tgD~gr~l~ng~l~~~GR~d~qIK~r-G~Ri~L~ei~t~v~~~p 500 (1032)
T KOG1178|consen 423 AEQNLSSWVVDG-YSTPENFLPNFLTVDGVKARIYRTGDNGRSLKNGGLEISGRADRQIKDR-GVRIELGELNTVVEVHP 500 (1032)
T ss_pred ccccccceeecc-ccchhhcCCcccccccchhhcccccccceeecCCCEEEEEeccceEEEc-cEEEehhhhchhhccCc
Confidence 122223334444 2334433332221 11123799999999999999999999999999986 99999999999999999
Q ss_pred ccceEEEEecCCCc---eEEEEEEcChHHHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEE
Q 004977 608 YVDNIMIHADPFHN---YCVALVVPSHKALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIK 684 (721)
Q Consensus 608 ~V~~~~V~g~~~~~---~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~ 684 (721)
.|.++.+....+.. .++|||++.... + . .....|+.+++ +.|+.||+|..++
T Consensus 501 ~v~~~itl~~~~~~~~~~l~aFvv~~~~~----------~-~-------------~~~~~i~~~l~-~~La~y~vPs~~V 555 (1032)
T KOG1178|consen 501 DVKEAITLARENSTVGQTLLAFVVERGGS----------K-S-------------VLIRDIRNYLK-KELASYMLPSLVV 555 (1032)
T ss_pred chhhhheeeeeccccCceEEEEEeccCCC----------C-c-------------hhHHHHHHhhc-ccccceecceEEE
Confidence 99999998876553 599999987532 1 1 01478999999 9999999999999
Q ss_pred eeCCCCCCCCCccCcccccChHHHHHH
Q 004977 685 LMPEPWTPEAGLVTAALKIKREQLKAK 711 (721)
Q Consensus 685 ~~~~~~~p~~~~~t~~gKi~R~~l~~~ 711 (721)
.++.. | +|++||||+++|.+.
T Consensus 556 ~l~~v--P----l~~~GKvDkkaL~~~ 576 (1032)
T KOG1178|consen 556 PLAKV--P----LNPNGKVDKKALLEY 576 (1032)
T ss_pred EhhhC--C----cCCCCCcChhhhhhh
Confidence 99998 6 999999999999983
No 125
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=99.97 E-value=9.2e-28 Score=261.90 Aligned_cols=526 Identities=14% Similarity=0.146 Sum_probs=342.7
Q ss_pred CCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhC-CCCCCCEEEE
Q 004977 82 STMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNF-GHNVDTRAAI 160 (721)
Q Consensus 82 ~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~-Gv~~gd~V~i 160 (721)
.|+.++++..++++||.+|+..- +++ ......+||++|..+|.+++.+|.+. -+++||.|++
T Consensus 770 ~~ile~Lq~R~a~tp~~~a~~~~-----------n~~------~~~~~~~Tw~~f~krva~i~~~l~~k~~lk~Gd~V~L 832 (1363)
T KOG3628|consen 770 LTILEILQWRAAKTPDHIAFTTL-----------NAR------GATKKTLTWAQFHKRVARIAEYLQDKGHLKAGDHVVL 832 (1363)
T ss_pred HHHHHHHHHHhhcCCCceEEEEe-----------ccC------CcccceeEHHHHHHHHHHHHHHHHhcccCCCCCeEEE
Confidence 68999999999999999999875 333 23445899999999999999999977 6899999999
Q ss_pred EccCcHhHHHHHHHHHhcCCEEEEecCCCCH------HHHHHHHHhcCceEEEECccchhHHHhhh--hc--CCCccEEE
Q 004977 161 LAETCVEWFIAFQGCFRQSITVVTIYSSLGE------DALIHSLNETQVTTLICDSKQLKKLSAVS--SS--LKTIKNVI 230 (721)
Q Consensus 161 ~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~------~~l~~~l~~~~~~~vi~~~~~~~~~~~~~--~~--~~~~~~ii 230 (721)
+.+++.|++++++||+.+|.+++|+.|.... ..+..+++..++..|+++.+....+..-. .. ......++
T Consensus 833 my~~sie~vaa~~~Cly~GliPIpv~p~~~s~l~~~l~~~~~ii~~~kv~ailv~~~v~~lLrsr~~s~~~~~s~~p~i~ 912 (1363)
T KOG3628|consen 833 MYPPSIEFVAAIYACLYLGLIPIPVPPPHASNLIEDLPTFRMIIKVYKVAAILVDQKVLKLLRSREASAHVDQSAIPLIL 912 (1363)
T ss_pred EcCChHHHHHHHHHHHhcCeeeeccCCccHHhhhhhhHHHHHHHHHhhhheEEecHHHHHHHhhhhHHHHhhhhcchhhh
Confidence 9999999999999999999999999876433 47889999999999999987655443211 00 01111222
Q ss_pred EecCCCCCccCCccCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHHHHHHHhh
Q 004977 231 YFENDGSEKDSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTL 310 (721)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~ 310 (721)
.+++....- ........+ .....++...+++.+|++-|.--++|.--|+.+||.++++.++...+.
T Consensus 913 ~~~~~~~t~------------~k~~~~~~k--~~~~~~~g~~~k~~~a~v~~~~~~dg~l~~~~msHsslla~Ck~iKe~ 978 (1363)
T KOG3628|consen 913 VLPKLPETI------------RKRKKNIKK--LNTPTPPGLNNKETPALVWFNVSTDGMLIGVKMSHSSLLAFCKIIKET 978 (1363)
T ss_pred cccccchhh------------hhhhhhhhc--cCCCCCccccCCCceEEEEEEecCCcceeeeeccHHHHHHHHHHHHHH
Confidence 211111000 000111111 112223445577889999999999999999999999999999999998
Q ss_pred CCCCCCCcEEEeccChHHHHHHHH-HHHHHHhcceEeeCccccccccchhhccCccCcceeecceEEeechHHHHHHHHH
Q 004977 311 IPNPGRSDVYLAYLPLAHVLELAA-ESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREG 389 (721)
Q Consensus 311 ~~~~~~~d~~l~~~pl~h~~g~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~ 389 (721)
. .+.++--++.+.+.+-..|+.. .+...+.|.+.++.+|..+... +..++..++++++.-++.+-..++.+.+.
T Consensus 979 ~-~l~~~rpl~~~~~~~sGlgf~~wcLlgVysGh~T~Li~p~~l~nn----psLll~~i~~~kvkDt~~~~~tln~c~~~ 1053 (1363)
T KOG3628|consen 979 C-QLYKSRPLLGCSSPYSGLGFNHWCLLGVYSGHPTLLISPMDLENN----PSLLLQIISQYKVKDTYPTYSTLNLCQKG 1053 (1363)
T ss_pred H-ccccCCceEEEecCccchhHHHHHHHHHHcCCceeecCHHHhhcC----HHHHHHHHhcccccccchhHHHHHHHHhc
Confidence 8 7777777777777777777654 6677899999999888888777 55566669999998888888888777664
Q ss_pred HHHHHHhhcchhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHHHHHHHhh
Q 004977 390 VVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICM 469 (721)
Q Consensus 390 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~~~~~~ 469 (721)
...+.+. ++..-.+. ++ ..++..-+.....+.+-+.+.+
T Consensus 1054 l~t~~en---l~~~gnn~-------------------------------------s~-s~vv~~~~RPr~ali~sf~klf 1092 (1363)
T KOG3628|consen 1054 LETSVEN---LSKRGNNT-------------------------------------SS-SIVVPAEERPRIALIASFKKLF 1092 (1363)
T ss_pred cccccch---hhhhhccc-------------------------------------cc-ceeeecCCccHHHHHHHHHHHH
Confidence 4332221 11000000 01 1111111121222222111111
Q ss_pred ---CC---cc-------------cccccccccccccc--------------ccCCCCCCCCccCCCcCcceEEEEecCCC
Q 004977 470 ---GA---PI-------------GQAYGLTETCAGST--------------FSEWDDPSVGRVGPPVPCCYIKLVSWDEG 516 (721)
Q Consensus 470 ---g~---~l-------------~~~YG~TE~~~~~~--------------~~~~~~~~~~~vG~p~p~~~v~i~d~~~~ 516 (721)
|. .+ .++|-.-|-+..-. ...+........|...+++++.|++|++-
T Consensus 1093 a~igLsp~avStsys~r~Np~Ic~r~~sg~~Pt~~y~D~raLR~grV~~ve~~ap~~l~L~dSG~~~~~~~i~IvnPEtk 1172 (1363)
T KOG3628|consen 1093 AAIGLSPRAVSTSYSSRVNPFICLRSYSGPEPTTVYLDARALREGRVRLVEVGAPHSLLLYDSGKLPVYTDIAIVNPETK 1172 (1363)
T ss_pred HHcCCChhhhcccccccCChHhhhccccCCCCcceeechhhhhccceeeeecCCCCccccccCCcccccceeEEeCCccc
Confidence 10 01 11221111110000 00000111123588889999999998876
Q ss_pred CcccCCCCCCcceEEEccccccccccCCCcc-ccccccc-----CCCCcceEeeCcEEEEc------cCC----eEEEEe
Q 004977 517 GYKTSDKPMPRGEIVVGGFNVTAGYFNNPGK-TSEVYKV-----DERGMCWFYTGDIGQVY------PDG----CLEIID 580 (721)
Q Consensus 517 ~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~-t~~~f~~-----~~~g~gw~~TGDlg~~d------~dG----~l~i~G 580 (721)
++ |..|+.||||+.+.+-+.+|++--+. ....|.. +-++.+|-||||+|++. .+| -||++|
T Consensus 1173 ~p---c~dge~GEIW~~S~hnA~~~~~~~d~~~~~~fn~rl~~g~~~~~sy~RTG~LGFl~~t~~t~~~~e~~~~LyVlG 1249 (1363)
T KOG3628|consen 1173 GP---CRDGELGEIWVNSAHNASCSFTIGDELRSNHFNARLSSGDLLGKSYARTGDLGFLRRTSLTDANVERHDLLYVLG 1249 (1363)
T ss_pred cc---cccCCcceEEeccccccccccccCchhhhhhhhhhccccccccccceeeeeeeeeeeeecccccceeeeeEEEee
Confidence 65 56899999999999999988865211 1111211 12256899999999983 222 499999
Q ss_pred cCCCeEEcCCeeeeechHHHHHHhc-CcccceEEEEecCCCceEEEEEEcChHHHHHHHHHhCCCcccHHHHhccHHHHH
Q 004977 581 RKKDIVKLQHGEYISLGKVEAALIS-SDYVDNIMIHADPFHNYCVALVVPSHKALEKWAHEASIKYEDLSELCNKAEAVN 659 (721)
Q Consensus 581 R~~d~ik~~~G~~v~p~eIE~~l~~-~p~V~~~~V~g~~~~~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 659 (721)
-.++.+.++ |.+.+|.+||..+.. ||.|.+|+|+... ..+|.++....+. ++.+
T Consensus 1250 ~i~EtlEl~-GL~h~p~DIE~TV~~vH~~I~~cavF~~~--glvVvviE~~gq~----------------------~~~~ 1304 (1363)
T KOG3628|consen 1250 AIDETLELN-GLRHFPSDIETTVERVHPSIGGCAVFQAT--GLVVVVIECHGQQ----------------------ELAD 1304 (1363)
T ss_pred cccceeeec-CcccCcchHHHHHHHhcccccceeeEeeC--CeEEEEEEecCch----------------------hHhh
Confidence 999999995 999999999998865 9999999999864 3455555544321 0111
Q ss_pred HHHHHHHHHHHHCCCCCcccccEEEeeCCCCCCCCCccCcccccChHHHHHHH-HHHHHhhh
Q 004977 660 EVQQALSKVAKAAKLDKFEIPAKIKLMPEPWTPEAGLVTAALKIKREQLKAKF-KDDLQMLY 720 (721)
Q Consensus 660 ~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~~~p~~~~~t~~gKi~R~~l~~~~-~~~i~~~Y 720 (721)
.+---+...+. .++-+..-+.|++. ...|+++.|--+|..+++.+ .++|+-+|
T Consensus 1305 LvPlIv~~vL~----eH~iI~dvV~fV~~----G~~p~~~~gEK~R~~I~~~w~~~kL~~~~ 1358 (1363)
T KOG3628|consen 1305 LVPLIVNVVLE----EHYIILDVVAFVDK----GVFPRNSRGEKQRAHILDSWLAGKLDPIY 1358 (1363)
T ss_pred hhHHHHHHHHh----hcceEEEEEEEecC----CccccCCchhhHHHHHHHHHHhcccceee
Confidence 11111122222 23345556667774 23339999999999888764 45555443
No 126
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=99.94 E-value=7.9e-26 Score=247.16 Aligned_cols=255 Identities=16% Similarity=0.127 Sum_probs=181.4
Q ss_pred CCCCeEEEEeccCCCCCcchheeccHHHHHHHHHHHhhC--CCCCCCcEEEeccChHHHHHHHH-HHHHHHhcceEeeCc
Q 004977 273 SQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLI--PNPGRSDVYLAYLPLAHVLELAA-ESIMLCAGCAIGYGS 349 (721)
Q Consensus 273 ~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~--~~~~~~d~~l~~~pl~h~~g~~~-~~~~l~~G~~~~~~~ 349 (721)
..++++.+.|||||||.||+|.+||.++..........+ .++.++|+++...|+.+..+... .+.++..|++++...
T Consensus 84 ~~~~i~~i~~TSGTTG~Pk~v~~T~~dl~~~~~~~~r~~~~~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~~ 163 (445)
T TIGR03335 84 DWKDIYTIHETSGTSGTPKSFFLTWDDWKRYAEKYARSFVSQGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPEG 163 (445)
T ss_pred CHHHeEEEEeCCCCCCCcceeeecHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcCC
Confidence 457889999999999999999999999887665443321 27889999999998887666544 345577888765432
Q ss_pred c-ccccccchhhccCccCcceeecceEEeechHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHhhhccccccCCchh
Q 004977 350 T-LTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLER 428 (721)
Q Consensus 350 ~-~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 428 (721)
. .... ..++++++|.+.++|+.+..+.+........
T Consensus 164 ~~~~~~-----------~~i~~~~~t~l~~~ps~ll~La~~~~~~g~~-------------------------------- 200 (445)
T TIGR03335 164 KCTFPI-----------RIIESYRPTGIVASVFKLLRLARRMKAEGID-------------------------------- 200 (445)
T ss_pred chhHHH-----------HHHHHhCCCEEEECHHHHHHHHHHHHHcCCC--------------------------------
Confidence 2 1122 2388999999999999888776542211000
Q ss_pred hhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHHHHHHHhhCCccccccccccccccccccCCCCCCCCccCCCc--Ccc
Q 004977 429 MLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMGAPIGQAYGLTETCAGSTFSEWDDPSVGRVGPPV--PCC 506 (721)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~--p~~ 506 (721)
....++|.+++||+++++++.+.+.+.+|+++++.||+||++... .+. ...|..+ +.+
T Consensus 201 -------------~~~~~lr~ii~gGE~l~~~~r~~ie~~~g~~v~~~YG~TE~~~~~-~c~------~~~g~h~~~d~~ 260 (445)
T TIGR03335 201 -------------PAESSIRRLVVGGESFADESRNYVEELWGCEVYNTYGSTEGTMCG-ECQ------AVAGLHVPEDLV 260 (445)
T ss_pred -------------cccCcceEEEEcCCCCCHHHHHHHHHHhCCcEEecCChhhhhheE-Eec------CCCCccccCCce
Confidence 001379999999999999999999988999999999999986322 111 1224444 457
Q ss_pred eEEEEecCCCCcccCCCCCCcceEEEccccccccccCCCcccccccccCCCCcceEeeCcEEEEcc-C----C----eEE
Q 004977 507 YIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVDERGMCWFYTGDIGQVYP-D----G----CLE 577 (721)
Q Consensus 507 ~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~~~g~gw~~TGDlg~~d~-d----G----~l~ 577 (721)
.+.|+|++++.. +++|+.|||++.+-.-. .+.+.+ += --|+|||++++.. + | .+.
T Consensus 261 ~vEIvDp~~~~~---vp~Ge~GELvvT~L~~~--------~~r~~~---Pl--iRYrtgD~~~~~~~~~C~CGr~~~r~~ 324 (445)
T TIGR03335 261 HLDVYDPRHQRF---LPDGECGRIVLTTLLKP--------GERCGS---LL--INYDTEDTTVVISRDRCPCGRTHMRIL 324 (445)
T ss_pred EEEEEcCCCCCC---CcCCCceEEEEEecCCC--------CccCCc---eE--EEeecCceEEEecCCCCCCCCCcceeC
Confidence 899999655443 35899999999764210 011111 11 3589999999732 2 2 255
Q ss_pred EEecCCCeEEcCCeeeeechHHHHHHhcCc
Q 004977 578 IIDRKKDIVKLQHGEYISLGKVEAALISSD 607 (721)
Q Consensus 578 i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p 607 (721)
..||.||+++++ |.+|+|.+||++|.+++
T Consensus 325 ~~gR~dd~~~~~-g~~~~p~~ie~~l~~~~ 353 (445)
T TIGR03335 325 NPEREAETIWIS-GVPFNRVDVERAVFQRE 353 (445)
T ss_pred CCcccCceEEEC-CEEeCHHHHHHHHhccC
Confidence 679999999996 99999999999999953
No 127
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=99.93 E-value=1.6e-24 Score=213.64 Aligned_cols=221 Identities=13% Similarity=0.082 Sum_probs=157.6
Q ss_pred HHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHh-CCCCCCCEEEEEccCcH
Q 004977 88 FEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVN-FGHNVDTRAAILAETCV 166 (721)
Q Consensus 88 ~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~-~Gv~~gd~V~i~~~n~~ 166 (721)
+...++++|+++|+++.+ |+. ++.+.+||+|+.++++++|+.|++ .|+++||+|+|+++|++
T Consensus 2 ~~~~~~~~p~~~al~~~~----------~~~-------~~~~~~Ty~~l~~~~~~~a~~L~~~~Gv~~GdrV~i~~~n~~ 64 (227)
T TIGR03089 2 LSPLLAADPASPRLTFYD----------DAT-------GERVELSAATLANWVAKTANLLQDELDAEPGSRVALDLPAHW 64 (227)
T ss_pred hhhhhhhCCCCcEEEEEc----------CCC-------CeeEEEEHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCH
Confidence 466788999999998631 110 112469999999999999999998 79999999999999999
Q ss_pred hHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccchhHHHhhhhcCCCccEEEEecCCCCCccCCccCC
Q 004977 167 EWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEKDSGVSGG 246 (721)
Q Consensus 167 e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~ 246 (721)
+++++++||+++|++++|+| ++++++++++++..+.+. .+ +.++.+.......... ...
T Consensus 65 ~~~~~~~a~~~~G~v~vp~n-------------~s~a~~~v~~~~~~~~~~-----~~--~~~~~~~~~~~~~~~~-~~~ 123 (227)
T TIGR03089 65 QTAVWLLAAWSTGVEVVLAG-------------DPDADVVVTGPDRLAAAA-----GS--GEVVALSLDPLGRRVA-GEL 123 (227)
T ss_pred HHHHHHHHHHHcCCEEEeCC-------------CCCCCEEEeCcchhhhcc-----cC--CceEEEeccccccCCC-CCC
Confidence 99999999999999999995 789999999988776643 11 2233321100000000 000
Q ss_pred CCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHHHHHHHhhCCCCCCCcEEEeccCh
Q 004977 247 ISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNPGRSDVYLAYLPL 326 (721)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~d~~l~~~pl 326 (721)
.. ...++.+..........+.....++|+++|+||||+ +|++++... ... +++++|+++ .+|+
T Consensus 124 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~D~a~l~yTsg~---------~~~~~~~~~----~~~-~l~~~D~~l-~~Pl 186 (227)
T TIGR03089 124 PP--GVIDFAPEVRVHGDQFAPYEPPDATAPALVAGGGEW---------TGAELVAAA----RAA-GLPPGDRVL-VLAW 186 (227)
T ss_pred CC--cccchhhhhhccCCCCCCCCCCCCCcceeeeccccc---------cHHHHHHHH----hhc-CCCCCCeEE-ecCC
Confidence 11 123555544422222111114467999999999985 677766654 334 789999999 9999
Q ss_pred HHHHHHHH-HHHHHHhcceEee---CccccccccchhhccCccCcceeecce
Q 004977 327 AHVLELAA-ESIMLCAGCAIGY---GSTLTMTDTSSKIKKGTKGDVSVLKPT 374 (721)
Q Consensus 327 ~h~~g~~~-~~~~l~~G~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~t 374 (721)
+|++|+.. ++.+|..|+++++ +++..+++. |+++|||
T Consensus 187 ~H~~gl~~~~~~~l~~G~t~v~~~rFd~~~~l~~-----------i~~~~vT 227 (227)
T TIGR03089 187 TDLEDFLATLLAPLAAGGSLVLVTHPDPARLDQI-----------AETERVT 227 (227)
T ss_pred CchHHHHHHHHHHhccCceEEEecCCCHHHHHHH-----------HHhhcCC
Confidence 99999865 7788999999998 555555555 8888876
No 128
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=99.88 E-value=8.9e-21 Score=196.40 Aligned_cols=282 Identities=20% Similarity=0.180 Sum_probs=200.7
Q ss_pred CCCCCCeEEEEeccCCCCCcchheeccHHHHHHHHHHHhhC--CCCCCCcEEEeccChH-HHHHHHHHHHHHHhcceEee
Q 004977 271 LPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLI--PNPGRSDVYLAYLPLA-HVLELAAESIMLCAGCAIGY 347 (721)
Q Consensus 271 ~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~--~~~~~~d~~l~~~pl~-h~~g~~~~~~~l~~G~~~~~ 347 (721)
....++...|--||||||.|+-+.+++..+......+.+.+ .+...+|++..+.-.. +..|+..-..+--.|++++-
T Consensus 86 ~~~~~~i~~ihaSSGTTGkPt~~~~t~~D~~~wa~~~aR~~~~~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vip 165 (438)
T COG1541 86 AVPKEEIVRIHASSGTTGKPTVFGYTAKDIERWAELLARSLYSAGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVIP 165 (438)
T ss_pred cccccceEEEEccCCCCCCceeeecCHHHHHHHHHHHHHHHHHccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEEc
Confidence 34456677788999999999999999999887777666654 3677888876554411 11222222333345666554
Q ss_pred CccccccccchhhccCccCcceeecceEEeechHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHhhhccccccCCch
Q 004977 348 GSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLE 427 (721)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 427 (721)
.++... ......+..+++|++.++|+.+..|.+.+...... .
T Consensus 166 ~~~g~~--------~~~~~l~~df~~tvI~~tps~~l~lae~~~~~G~~--~---------------------------- 207 (438)
T COG1541 166 ISGGNT--------ERQLELMKDFKPTVIAATPSYLLYLAEEAEEEGID--P---------------------------- 207 (438)
T ss_pred cCCccH--------HHHHHHHHhcCCcEEEEChHHHHHHHHHHHHcCCC--h----------------------------
Confidence 333211 11223389999999999999999998865543100 0
Q ss_pred hhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHHHHHHHhhCCccccccccccccccccccCCCCCCCCccCCCc--Cc
Q 004977 428 RMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMGAPIGQAYGLTETCAGSTFSEWDDPSVGRVGPPV--PC 505 (721)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~--p~ 505 (721)
.-.+++.+++|+|+++++..+.+.+.+|+..++.||+||..+.. ...... .. |..+ ..
T Consensus 208 ---------------~~~~lk~~i~gaE~~see~R~~ie~~~g~~~~diYGltE~~g~g-~~eC~~---~~-glhi~eD~ 267 (438)
T COG1541 208 ---------------DKLSLKKGIFGAEPWSEEMRKVIENRFGCKAFDIYGLTEGFGPG-AGECTE---RN-GLHIWEDH 267 (438)
T ss_pred ---------------hhcceeEEEEecccCCHHHHHHHHHHhCCceeeccccccccCCc-cccccc---cc-CCCcchhh
Confidence 01389999999999999999999999999999999999997663 111111 11 3333 56
Q ss_pred ceEEEEecCCCCcccCCCCCCcceEEEccccccccccCCCcccccccccCCCCcceEeeCcEEEEccC----C-----eE
Q 004977 506 CYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVDERGMCWFYTGDIGQVYPD----G-----CL 576 (721)
Q Consensus 506 ~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~~~g~gw~~TGDlg~~d~d----G-----~l 576 (721)
..+.|+||+++.+++ .|+.|||++..-. ++.+ +- --|+|||++.+.++ | -.
T Consensus 268 ~~~Ei~dP~t~e~l~---dge~GelV~T~L~------------~~~~---Pl--IRYrtgDit~i~~~~C~cGr~~~ri~ 327 (438)
T COG1541 268 FIFEIVDPETGEQLP---DGERGELVITTLT------------KEGM---PL--IRYRTGDITVILSDPCGCGRTHRRIE 327 (438)
T ss_pred ceeeeecCCcCccCC---CCCeeEEEEEecc------------ccCc---ce--EEEEcCCeeEecccCCCCCCcccccc
Confidence 788999988888765 7899999986432 2222 22 46999999999763 3 26
Q ss_pred EEEecCCCeEEcCCeeeeechHHHHHHhcCcccc---eEEEEecCCCceEEEEEEcCh
Q 004977 577 EIIDRKKDIVKLQHGEYISLGKVEAALISSDYVD---NIMIHADPFHNYCVALVVPSH 631 (721)
Q Consensus 577 ~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~---~~~V~g~~~~~~~~a~vv~~~ 631 (721)
.|.||.||+++++ |.+|+|..||++|.+.+.+. ++.+........+..-|...+
T Consensus 328 ~I~GR~dD~l~~~-G~~vfp~~ie~~l~~~~~~~~~yqi~~~~~~~~d~L~V~vE~~~ 384 (438)
T COG1541 328 RIEGRSDDMLIVR-GVNVFPSQIERVLLQIPEVTPHYQIILTRNGGLDELTVRVELEN 384 (438)
T ss_pred ccCcccccEEEEC-CEEeCHHHHHHHHhcccCCCceEEEEEecCCCCceEEEEEEecC
Confidence 7999999999997 99999999999999999999 666666333345666666654
No 129
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.82 E-value=3e-20 Score=193.55 Aligned_cols=114 Identities=18% Similarity=0.193 Sum_probs=100.1
Q ss_pred ceEeeCcEEEE-ccCCeEEEEecCCCeEEcCCe---eeeechHHHHHHhcCcccceEEEEecCCCc---eEEEEEEcChH
Q 004977 560 CWFYTGDIGQV-YPDGCLEIIDRKKDIVKLQHG---EYISLGKVEAALISSDYVDNIMIHADPFHN---YCVALVVPSHK 632 (721)
Q Consensus 560 gw~~TGDlg~~-d~dG~l~i~GR~~d~ik~~~G---~~v~p~eIE~~l~~~p~V~~~~V~g~~~~~---~~~a~vv~~~~ 632 (721)
|||+|||+|++ |+||+|+|+||.| +| +||+|. ||++|.+||+|.+|+|+|.+++. .++|+|++...
T Consensus 209 gW~~TGDlg~~~d~dG~l~~~gR~~------~G~~i~nV~p~-IE~~L~~hp~V~eaaVvgvpd~~~ge~v~A~Vv~~~~ 281 (365)
T PRK09188 209 IWLATGKKVYNFITRGLFSWSDGEG------TGDRIDNEAPA-IQAALKSDPAVSDVAIALFSLPAKGVGLYAFVEAELP 281 (365)
T ss_pred cEEeCCCEEEEEcCCCeEEEEecCc------CCcCceeeCHH-HHHHHHhCCCccEEEEEEEEcCCCCeEEEEEEEECCC
Confidence 99999999998 7999999999998 58 899999 99999999999999999998764 59999987531
Q ss_pred HHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCCCCCCCCccCcccccChHHHHHHH
Q 004977 633 ALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEPWTPEAGLVTAALKIKREQLKAKF 712 (721)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~~~p~~~~~t~~gKi~R~~l~~~~ 712 (721)
. + .++|+++++ ++|++ ++|+.|.+++++ | +|++|||+|++|++..
T Consensus 282 ~----------~-----------------~~el~~~l~-~~L~~-kvP~~v~~v~~l--P----~t~~GKi~R~~Lr~~~ 326 (365)
T PRK09188 282 A----------D-----------------EKSLRARLA-GAKPP-KPPEHIQPVAAL--P----RDADGTVRDDILRLIA 326 (365)
T ss_pred C----------C-----------------HHHHHHHHH-hhchh-cCCcEEEEECCC--C----CCCCCCccHHHHHHHh
Confidence 1 0 267899998 89999 999999999998 6 9999999999999876
Q ss_pred HHH
Q 004977 713 KDD 715 (721)
Q Consensus 713 ~~~ 715 (721)
.+.
T Consensus 327 ~~~ 329 (365)
T PRK09188 327 MNQ 329 (365)
T ss_pred hcc
Confidence 433
No 130
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=99.74 E-value=3.3e-16 Score=172.41 Aligned_cols=517 Identities=16% Similarity=0.148 Sum_probs=318.2
Q ss_pred CCCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHH-HHHhCCCCCCCEEE
Q 004977 81 ASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFAS-GLVNFGHNVDTRAA 159 (721)
Q Consensus 81 ~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~-~L~~~Gv~~gd~V~ 159 (721)
...+..+++..-.+++...|.++- |.+ |....+||..+..++.++|+ .|.+.|+.++|+|.
T Consensus 93 ~~d~~avl~~~~nhs~~~ta~i~i-----------d~k-------gk~~~~twdkl~~rA~k~a~~~l~ksgl~~~~~vv 154 (1363)
T KOG3628|consen 93 LTDIIAVLRYRRNHSATSTAHICI-----------DKK-------GKATSITWDKLLNRAEKVAHVELNKSGLKPGDRVV 154 (1363)
T ss_pred hcchHHHHHhhccCCCCCceEEEE-----------cCC-------CceeeeeHHHHHHHHHhhccHHhhccCCCCCcEEE
Confidence 456777777777888889998875 333 33568999999999999999 77778999999999
Q ss_pred EEccCc--HhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccchhHHHhhhhcCCCccEEEEecCCCC
Q 004977 160 ILAETC--VEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGS 237 (721)
Q Consensus 160 i~~~n~--~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~ 237 (721)
++...+ .|+++..++|..+|.+++|+.+..+.+++..+++....+++++................-.+.+-+....
T Consensus 155 L~Y~~~e~ie~~isl~gc~l~g~~~vp~~e~~s~~el~~i~~~~~~~~~l~t~a~~r~~~~~~~~~s~~k~v~~w~t~-- 232 (1363)
T KOG3628|consen 155 LYYRKCEAIEFLISLFGCFLLGIVAVPLSELSSSEELKDIVNPTPERVALTTEAGERAFINDNSPVSLAKAVAWWKTN-- 232 (1363)
T ss_pred EEEEhhhhhHHhhhhccccccceeeccchhhhhhhhhhcccCCCccceEeehhhhHHHhhhccCcccHHHHHHhhhcc--
Confidence 999887 8999999999999999999999999999999999999999999877665544322110000000000000
Q ss_pred CccCCccCCCCCce-EeeHHHHHhcCCCCCCCCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHHHHHHHhhC-----
Q 004977 238 EKDSGVSGGISNWT-VSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLI----- 311 (721)
Q Consensus 238 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~----- 311 (721)
..+ .+.++.. ..+..... ..+|-||++++|.--|++++|+ ++.+.+.+....
T Consensus 233 -----------~~k~~~~~~k~---------~~P~~~~~-~~~i~~t~s~l~~~~g~V~~~~-~~~q~r~~~~~~nt~Pa 290 (1363)
T KOG3628|consen 233 -----------DFKGNYTKDKI---------KKPRMQLP-YGYIEFTRSPLGNLIGVVYKHK-FLPQMRVLTSIPNTNPA 290 (1363)
T ss_pred -----------cccceeehhhc---------cCCceeee-eEEEEEeccchhceeeeEeecc-cccchhhhhhccCcChH
Confidence 000 1111110 01111222 7999999999999999999998 554433221111
Q ss_pred --------------CCCCCCcEEEeccChHHHHHHHH-HHHHHHhcceEeeCccccccccchhhccCccCcceeecceEE
Q 004977 312 --------------PNPGRSDVYLAYLPLAHVLELAA-ESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLM 376 (721)
Q Consensus 312 --------------~~~~~~d~~l~~~pl~h~~g~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l 376 (721)
......++++..+......|++. ++.++++|.|....+...+... -.+...+.+++.+++
T Consensus 291 ~~~~~~~~~~~~~v~~~~~~~~~l~~~~~s~~lGlilGV~~alfsg~c~i~~p~~~l~~p-----G~~~~l~~k~R~~~~ 365 (1363)
T KOG3628|consen 291 RFAAAFYGCLHAHVFPVPSEDVLLTNLDPSQQLGLILGVLVALFSGYCTIGCPKEVLKPP-----GLIANLITKYRATWS 365 (1363)
T ss_pred HHHHhhhcchhhhccccCcccceeeccCcccccchhhhhhhhhhcCceeecCchhhcCCC-----cchhhhhccceeEEE
Confidence 13456677777777777777765 7788999998876433222211 223333778888887
Q ss_pred eechHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCC
Q 004977 377 AAVPAIFDRVREGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAP 456 (721)
Q Consensus 377 ~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~ 456 (721)
..--..+.+.....+. .--..+.|.+-+..+.+++|.+.+.-..
T Consensus 366 ltd~~~Lkq~~~ny~~------------------------------------~p~a~~s~~k~~t~d~sslk~C~Vtc~~ 409 (1363)
T KOG3628|consen 366 LTDYAGLKQPVYNYQE------------------------------------DPKATLSFKKYKTPDLSSLKGCMVTCTA 409 (1363)
T ss_pred eecccccCcccccccC------------------------------------CcccccchhhccCCCccceeeeEEeeee
Confidence 7654444333221111 0001122344445566899999999999
Q ss_pred CCHHHHHHHHHhh----CCc-ccc-----------------ccccccccccccccCCCCC--------------------
Q 004977 457 LSADSQRFINICM----GAP-IGQ-----------------AYGLTETCAGSTFSEWDDP-------------------- 494 (721)
Q Consensus 457 l~~~~~~~~~~~~----g~~-l~~-----------------~YG~TE~~~~~~~~~~~~~-------------------- 494 (721)
+..+..+....++ |.. +.. .=+++|.+......+....
T Consensus 410 vd~~~~~ivs~~wlk~lg~~~~~~~~~p~l~ll~hGgi~is~k~~~~~~~~~~r~p~~~~~~~~~e~ll~~~~L~~~~V~ 489 (1363)
T KOG3628|consen 410 VDTEFQEIVSDRWLKPLGETNVKVVDFPILCLLWHGGIPISFKDWMEIGTVSIRRPEQMADTLPGEGLLSKEALKLNEVE 489 (1363)
T ss_pred cchHHHHHHHHhhcccccCcCcceeechhhhhhhcCceEEEeccchhhhcccccCcccccccCccceeeeccccccceEE
Confidence 9988655444332 211 111 1222444433322221000
Q ss_pred ----------CCCccCCCcCc-ceEEEEecCCCCcccCCCCCCcceEEEccccccccccCCCcccccccccC--------
Q 004977 495 ----------SVGRVGPPVPC-CYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVD-------- 555 (721)
Q Consensus 495 ----------~~~~vG~p~p~-~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~-------- 555 (721)
....+|...|+ +.+.++++++... |.++++|||||.++++..+||.-+..|...|...
T Consensus 490 v~~e~~is~~s~kd~~~i~~g~~t~~vv~~~t~~L---C~~~eVGEIwVsS~~~~~~~~al~~~t~~~F~~~~~~s~~~~ 566 (1363)
T KOG3628|consen 490 VDTEDDISSLSVKDVLCIMPGDATLAVVNPDTNQL---CKTDEVGEIWVSSNSLGKLFYALDKQTENTFKATPVESSGKP 566 (1363)
T ss_pred EcchhhhhhcCccccceecccceEEEEeCCCcccc---cccCcceeEEEecCCcccceeeccccccceEEeeeccccCCC
Confidence 01235655555 5667777555443 6789999999999999999999888887777531
Q ss_pred CCCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechH----------HHHHHhcCcccceEEEEecCCCceEEE
Q 004977 556 ERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGK----------VEAALISSDYVDNIMIHADPFHNYCVA 625 (721)
Q Consensus 556 ~~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~e----------IE~~l~~~p~V~~~~V~g~~~~~~~~a 625 (721)
+....+.|||=+|++.+ |.++|+|-++|++.--.|.+++..+ |+.+++..+.|-++.|+- +++.+.
T Consensus 567 ~~n~~FmRtGLlGFv~~-gki~vl~~k~d~llq~~~~~h~~d~iv~thya~~~iktV~R~v~~VF~~saf~---~E~~~V 642 (1363)
T KOG3628|consen 567 PSNVPFMRTGLLGFVHN-GKIYVLGLKEDGLLQVSGWRHNADDIVATHYAVELIKTVMRGVIAVFDVSAFE---DEHIVV 642 (1363)
T ss_pred CccchhhhhcceeeeeC-CeEEEEEechhhhhhhhhhhhhhhhhHhhHHHHHHHHHHHhccceEEEEeeee---cceEEE
Confidence 11236899999999984 5566666555554322377666544 444555667788888877 344444
Q ss_pred EEEcChHHHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCCCCCCCCccCcccccCh
Q 004977 626 LVVPSHKALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEPWTPEAGLVTAALKIKR 705 (721)
Q Consensus 626 ~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~~~p~~~~~t~~gKi~R 705 (721)
+++-++...++ +.-+....+.+.+...- ++- +=.+.+++.--.| ||+-|-|.-
T Consensus 643 v~~esP~a~e~----------------~~~q~~~~v~q~l~~iH---qv~----vyCilivP~~tLP----rt~~~Gi~~ 695 (1363)
T KOG3628|consen 643 VVLESPDATEE----------------NSFQWMSRVFQALDSIH---QVG----VYCILIVPANTLP----RTPLGGIHN 695 (1363)
T ss_pred EEEeCcchhhh----------------hhhhHHHHHHHHHHHHh---ccc----ceEEEEeccccCC----Ccccccccc
Confidence 44444433210 00111222333333332 232 2344455542224 888888888
Q ss_pred HHHHHHHHH
Q 004977 706 EQLKAKFKD 714 (721)
Q Consensus 706 ~~l~~~~~~ 714 (721)
...++.|.+
T Consensus 696 ~~~k~~F~~ 704 (1363)
T KOG3628|consen 696 NECKQAFLE 704 (1363)
T ss_pred HHHHHHHHc
Confidence 888888753
No 131
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme. Members of this family form a distinct clade within a larger family of proteins that also includes coenzyme F390 synthetase, an enzyme known in Methanobacterium thermoautotrophicum and a few other methanogenic archaea. That enzyme adenylates coenzyme F420 to F390, a reversible process, during oxygen stress. Other informative homologies include domains of the non-ribosomal peptide synthetases involved in activation by adenylation. The family defined by this model is likely to be of an adenylate-forming enzyme related to but distinct from coenzyme F390 synthetase.
Probab=99.58 E-value=1.9e-13 Score=146.23 Aligned_cols=260 Identities=11% Similarity=0.085 Sum_probs=154.2
Q ss_pred EEEEeccCCCCCcchheeccHHHHHHHHHHHhh-C-CCCCCCcEEEeccCh-HHHHHHHHHHHHHHhc-ceEeeCccccc
Q 004977 278 AVIMYTSGSTGLPKGVMITHGNIVATAAAIKTL-I-PNPGRSDVYLAYLPL-AHVLELAAESIMLCAG-CAIGYGSTLTM 353 (721)
Q Consensus 278 a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~-~-~~~~~~d~~l~~~pl-~h~~g~~~~~~~l~~G-~~~~~~~~~~~ 353 (721)
..+..||||||.|-.+..+.............. . .++..++++...+.- .+.+. .+... ..+.+++..
T Consensus 102 ~~v~~TSGSSG~p~~f~~~~~~~~~~~a~~~~~~~~~g~~~g~r~a~~~~~~~~ly~------~~~~~~~~~~~~~l~-- 173 (430)
T TIGR02304 102 ISVGLSSGTSGRRGLFVVSPEEQQMWAGGILAKVLPDGLFAKHRIAFFLRADNNLYQ------SVNNRWISLDFFDLL-- 173 (430)
T ss_pred EEEEECCCCCCCceEEEECHHHHHHHHHHHHhhhCccccccCCcEEEEEccChhHHH------HHHhccceeeecCCC--
Confidence 457779999999999999988765443333222 2 244455555544210 11111 11111 111222211
Q ss_pred cccchhhccCccCcceeecceEEeechHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHhhhccccccCCchhhhHHH
Q 004977 354 TDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDA 433 (721)
Q Consensus 354 ~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (721)
+. .......|.+++||++.+.|+.+..|++...+...
T Consensus 174 -~~----~~~~l~~L~~~~P~~L~g~pS~l~~LA~~~~~~~l-------------------------------------- 210 (430)
T TIGR02304 174 -AP----FQAHIKRLNQRKPSIIVAPPSVLRALALEVMEGEL-------------------------------------- 210 (430)
T ss_pred -cC----HHHHHHHHHHhCCCEEEEcHHHHHHHHHHHHhcCC--------------------------------------
Confidence 11 12233348999999999999999999875432100
Q ss_pred HHHHHHHHHhCCcEEEEEecCCCCCHHHHHHHHHhhCCccccccccccccccccccCCCCCCCCccCCCcCcceEEEEec
Q 004977 434 IVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMGAPIGQAYGLTETCAGSTFSEWDDPSVGRVGPPVPCCYIKLVSW 513 (721)
Q Consensus 434 ~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~ 513 (721)
..+++.++++||+++++..+.+++.||+++++.||+|| +.+++.+.... -.+=...--+|..++|
T Consensus 211 ----------~~~~k~ii~~~E~l~~~~r~~Ie~~fg~~V~~~YG~tE-g~la~eC~~g~---lHl~ed~~~vE~~ivD- 275 (430)
T TIGR02304 211 ----------TIKPKKVISVAEVLEPQDRELIRNVFKNTVHQIYQATE-GFLASTCRCGT---LHLNEDLVHIEKQYLD- 275 (430)
T ss_pred ----------CCCceEEEEccCCCCHHHHHHHHHHhCCCeeEccCCch-hheEEecCCCC---EEEccccEEEEeeEEC-
Confidence 02689999999999999999999999999999999999 54433221111 0111111112333666
Q ss_pred CCCCcccCCCCCCcceEEEccccccccccCCCcccccccccCCCCcceEeeCcEEEEccC----C----eE-EEEecCCC
Q 004977 514 DEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVDERGMCWFYTGDIGQVYPD----G----CL-EIIDRKKD 584 (721)
Q Consensus 514 ~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~~~g~gw~~TGDlg~~d~d----G----~l-~i~GR~~d 584 (721)
+++. ++. |..++.| .++ += --|+|||++.+.++ | .| .|.||.+|
T Consensus 276 ~~~~----------~~~------ViT~L~n------~~~---Pl--IRYrtGD~~~~~~~~C~CGr~~~~i~~I~GR~dD 328 (430)
T TIGR02304 276 EHKR----------FVP------IITDFTR------TTQ---PI--VRYRLNDILVESEQPCSCGSATMAIERIEGRQDD 328 (430)
T ss_pred CCCc----------eEE------EEecCCC------ccc---eE--EeeeCCCEEEeCCCCCCCCCcccccCCccCccCC
Confidence 2221 232 3333322 111 11 35999999998544 3 24 48999999
Q ss_pred eEEc--CCeee--eechHHHHHH-hcCcccceEEEEecCCCceEEEEEEcCh
Q 004977 585 IVKL--QHGEY--ISLGKVEAAL-ISSDYVDNIMIHADPFHNYCVALVVPSH 631 (721)
Q Consensus 585 ~ik~--~~G~~--v~p~eIE~~l-~~~p~V~~~~V~g~~~~~~~~a~vv~~~ 631 (721)
++++ .+|.. |+|..++.++ ...++|.+.-++... ...+...+++.+
T Consensus 329 ~l~~~~~~G~~v~v~p~~~~~~i~~~~~~i~~yQi~Q~~-~~~l~v~~~~~~ 379 (430)
T TIGR02304 329 IFQLITRSGDEQTVFPDFIRRVILFTLPLIVEYRVLQTG-SAQLELIADCEL 379 (430)
T ss_pred EEEEecCCCCeEEeCHHHHHHHHHhcCCCCceEEEEEcc-CCeEEEEEEeCh
Confidence 9985 34555 4899999885 457899988777644 334444445443
No 132
>PF13193 AMP-binding_C: AMP-binding enzyme C-terminal domain; PDB: 3L8C_B 2VSQ_A 3R44_A 3RG2_B 3A9U_A 3A9V_A 3NI2_A 1V26_B 1ULT_B 1V25_B ....
Probab=98.99 E-value=5.5e-10 Score=88.80 Aligned_cols=67 Identities=22% Similarity=0.286 Sum_probs=54.4
Q ss_pred HHHHHHhcCcccceEEEEecCCC---ceEEEEEEcChHHHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCC
Q 004977 598 KVEAALISSDYVDNIMIHADPFH---NYCVALVVPSHKALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKL 674 (721)
Q Consensus 598 eIE~~l~~~p~V~~~~V~g~~~~---~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L 674 (721)
|||++|.+||+|.+|+|++.+++ +.++|+|++ . .++|+++++ .+|
T Consensus 1 EIE~~l~~~~~V~~~~V~~~~d~~~g~~l~a~vv~--~-----------------------------~~~i~~~~~-~~l 48 (73)
T PF13193_consen 1 EIESVLRQHPGVAEAAVVGVPDEDWGERLVAFVVL--D-----------------------------EEEIRDHLR-DKL 48 (73)
T ss_dssp HHHHHHHTSTTEEEEEEEEEEETTTEEEEEEEEEE--H-----------------------------HHHHHHHHH-HHS
T ss_pred CHHHHHhcCCCccEEEEEEEEcccccccceeEEEe--e-----------------------------ecccccchh-hhC
Confidence 79999999999999999999866 469999998 2 168888898 789
Q ss_pred CCcccc--cEEEeeCC-CCCCCCCccCcccc
Q 004977 675 DKFEIP--AKIKLMPE-PWTPEAGLVTAALK 702 (721)
Q Consensus 675 ~~~~~P--~~i~~~~~-~~~p~~~~~t~~gK 702 (721)
|+|++| ..++.+++ + | +|++||
T Consensus 49 ~~~~~P~~~~~v~~~~~l--P----~t~~GK 73 (73)
T PF13193_consen 49 PPYMVPRRIRFVRLDEEL--P----RTPSGK 73 (73)
T ss_dssp -GGGS-SEEEEEEESSSE--E----BETTSS
T ss_pred CCcceeeEEEEccccCcC--C----CCCCCC
Confidence 999999 45555566 5 6 999998
No 133
>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria. LuxE catalyses the formation of an acyl-protein thiolester from a fatty acid and a protein. This is the second step in the bioluminescent fatty acid reduction system, which converts tetradecanoic acid to the aldehyde substrate of the luciferase-catalysed bioluminescence reaction []. A conserved cysteine found at position 364 in Photobacterium phosphoreum LuxE (Q52100 from SWISSPROT) is thought to be acylated during the transfer of the acyl group from the synthetase subunit to the reductase. The C-terminal of the synthetase is though to act as a flexible arm to transfer acyl groups between the sites of activation and reduction []. A LuxE domain is also found in the Vibrio cholerae RBFN protein (Q06961 from SWISSPROT), which is involved in the biosynthesis of the O-antigen component 3-deoxy-L-glycero-tetronic acid. This entry represents the LuxE domain, which is found in archaeal and bacterial proteins.; GO: 0047474 long-chain fatty acid luciferin component ligase activity, 0008218 bioluminescence
Probab=98.66 E-value=7.4e-07 Score=93.55 Aligned_cols=238 Identities=16% Similarity=0.144 Sum_probs=128.1
Q ss_pred CCCCeEEEEeccCCCCCcchheeccHHHHHHHHHHHhhC---CCCCC-CcEEEeccChHHH---HHH--HHHHHHHHhcc
Q 004977 273 SQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLI---PNPGR-SDVYLAYLPLAHV---LEL--AAESIMLCAGC 343 (721)
Q Consensus 273 ~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~---~~~~~-~d~~l~~~pl~h~---~g~--~~~~~~l~~G~ 343 (721)
.++++..++-||||||.|--+.+.+..+......+...+ ..... .-.++...|-... ++. ......+..+.
T Consensus 87 ~~e~~~~~~tSSGTtG~~S~i~~D~~t~~~~~~~~~~~~~~~~~~~~~~~~il~l~p~~~~~~~~~~~~~~~~~~~~~~~ 166 (365)
T PF04443_consen 87 PEEEVEKVFTSSGTTGQPSRIFRDRETAERQQKSLNKIFQHFLGPSRLPMLILDLSPSPENRNSFSARYAGILGELFFGS 166 (365)
T ss_pred ChhhheeEEECCCCCCCCcEEEECHHHHHHHHHHHHHHHHhhcccccCCeEEEEecCCcccccchHHHHHHHHhhcccCc
Confidence 345677888899999998555566555555554443332 12221 1233333343211 111 11112233333
Q ss_pred eEeeCccccccccchhhccCccCcceeecceEEeechHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHhhhcccccc
Q 004977 344 AIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGA 423 (721)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 423 (721)
...+ +... ++... ....+.....+.++..+++.|.++-.++..+.+.....
T Consensus 167 ~~~l-~~~~-ld~~~-~~~~L~~~~~~~~pv~l~Gftf~~~~~~~~l~~~~~~~-------------------------- 217 (365)
T PF04443_consen 167 RFAL-DNDE-LDLEG-LIEALFRAEHSGEPVLLFGFTFFIWFLLDELEERGIRF-------------------------- 217 (365)
T ss_pred eeee-cCCc-cCHHH-HHHHHHHHHhCCCCEEEECchHHHHHHHHHHHhcCCcc--------------------------
Confidence 3222 1111 11100 01111111345678899999987776665432211100
Q ss_pred CCchhhhHHHHHHHHHHHHhCCcEEEEEecC------CCCCH-HHHHHHHHhhCC----ccccccccccccccccccCCC
Q 004977 424 WGLERMLWDAIVFKSVRAVLGGRIRFMICGG------APLSA-DSQRFINICMGA----PIGQAYGLTETCAGSTFSEWD 492 (721)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG------~~l~~-~~~~~~~~~~g~----~l~~~YG~TE~~~~~~~~~~~ 492 (721)
.+.+..+.+-.|| +.++. +..+.+++.+|+ .+++.||+||.....+-....
T Consensus 218 ------------------~L~~~s~vi~~GGwK~~~~e~v~r~ef~~~l~~~~Gv~~~~~i~~~ygmtEl~s~~~~~~~~ 279 (365)
T PF04443_consen 218 ------------------RLPKGSIVIHGGGWKGRRKEAVSREEFYARLQEVFGVIPIENIYDMYGMTELNSQAYECGHG 279 (365)
T ss_pred ------------------cCCCCCEEEeCCCCCccccCccCHHHHHHHHHHHHCCCCHHHeeeeeeccccchhheeCCCC
Confidence 0012345555555 45765 457788888897 689999999976543322111
Q ss_pred CCCCCccCCCcCcceEEEEecCCCCcccCCCCCCcceEEEccccccccccCCCcccccccccCCCCcceEeeCcEEEEcc
Q 004977 493 DPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVDERGMCWFYTGDIGQVYP 572 (721)
Q Consensus 493 ~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~~~g~gw~~TGDlg~~d~ 572 (721)
. .++|.- |.|.|+++..+ ++.|++|-|.+-.+... . .. +..-|.|+|.+..
T Consensus 280 -----~--~~~p~w-V~iRDp~tl~~---~~~Ge~Gli~vidl~~~-s---------------~p--~~IlTeDlGvl~~ 330 (365)
T PF04443_consen 280 -----H--FHVPPW-VIIRDPETLEP---LPPGETGLIQVIDLANT-S---------------YP--GFILTEDLGVLHG 330 (365)
T ss_pred -----c--ccCCCe-EEEECCCCCcC---CCCCCeeEEEEEccccc-C---------------CC--cEEEEcceeeecC
Confidence 1 123333 77888766544 55889999988665322 1 12 4578999998865
Q ss_pred C--------CeEEEEecCCCeE
Q 004977 573 D--------GCLEIIDRKKDIV 586 (721)
Q Consensus 573 d--------G~l~i~GR~~d~i 586 (721)
+ .++.++||.+.-=
T Consensus 331 ~~~c~cr~g~~f~vlGR~~~ae 352 (365)
T PF04443_consen 331 DDDCGCRKGKYFEVLGRADGAE 352 (365)
T ss_pred CCCCCCccCCEEEEEeCCCCCc
Confidence 4 2799999988544
No 134
>PF03321 GH3: GH3 auxin-responsive promoter; InterPro: IPR004993 Transcription of the gene family, GH3, has been shown to be specifically induced by the plant hormone auxin. The auxin-responsive GH3 gene promoter is composed of multiple auxin response elements (AuxREs), and each AuxRE contributes incrementally to the strong auxin inducibility to the promoter.; PDB: 4EPL_A 4EQ4_B 4EWV_B 4EQL_B 4EPM_A.
Probab=98.23 E-value=1.7e-05 Score=88.27 Aligned_cols=163 Identities=18% Similarity=0.223 Sum_probs=86.7
Q ss_pred hCCcEEEEEecCCCCCHHHHHHHHHhhC-C-ccccccccccccccccccCCCCCCCCccCCCcCcc-eEEEEecCCCC--
Q 004977 443 LGGRIRFMICGGAPLSADSQRFINICMG-A-PIGQAYGLTETCAGSTFSEWDDPSVGRVGPPVPCC-YIKLVSWDEGG-- 517 (721)
Q Consensus 443 ~~~~lr~v~~gG~~l~~~~~~~~~~~~g-~-~l~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~p~~-~v~i~d~~~~~-- 517 (721)
+.++|+.+.+-+..-...-.+.++..+| + .+..+|++||+-..+... + .. ..+.+.|+. -...++.++..
T Consensus 265 lWP~L~~v~~~~~g~~~~y~~~l~~~~g~~~~~~~~y~ASEg~i~i~~~-~--~~--~~~~l~~~~~ffEFip~~~~~~~ 339 (528)
T PF03321_consen 265 LWPNLKLVSCWGGGSMAPYAPKLREYFGGVPIQSKGYGASEGFIGIPLD-P--ED--PGYVLAPDSGFFEFIPVDEDEQN 339 (528)
T ss_dssp HSTT--EEEEE-SGGGGGGHHHHHHHHTTS-EEE-EEEETTEEEEEES--C--CC----EEE-TTSSEEEEEE-STT---
T ss_pred hCCCCcEEEEEcCCChHHHHHHHHHHcCCCceeeccccccceEEEEecC-C--CC--CceEeecCCeEEEEEeccCCccc
Confidence 4578995554333333344555555554 3 345789999974433222 1 11 112223332 33445533321
Q ss_pred ------cc--cCCCCCCcceEEEccccccccccCCCcccccccccCCCCcceEeeCcEEEEcc--CC--eEEEEecCCCe
Q 004977 518 ------YK--TSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVDERGMCWFYTGDIGQVYP--DG--CLEIIDRKKDI 585 (721)
Q Consensus 518 ------~~--~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~~~g~gw~~TGDlg~~d~--dG--~l~i~GR~~d~ 585 (721)
.+ ..+..|+.-||+|... .|.| -|+.||+.++.. ++ .+.|+||.+.+
T Consensus 340 ~~~~~~~l~~~ele~G~~YelviTt~---~GLy------------------RY~iGDvVrv~gf~~~~P~i~F~~R~~~~ 398 (528)
T PF03321_consen 340 PSEQPKTLLLHELEVGEEYELVITTN---SGLY------------------RYRIGDVVRVTGFYNQTPRIEFVGRRGQV 398 (528)
T ss_dssp ----SSSEEGGG--TT-EEEEEEEST---TS-S------------------SEEECEEEEEEEEETTEEEEEEEEETTEE
T ss_pred ccCCCceecHHHhcCCCeEEEEEecc---ccee------------------eeecCCEEEEeeccCCCcEEEEeccCCce
Confidence 11 1245566677777543 2322 389999999852 45 79999999999
Q ss_pred EEcCCeeeeechHHHHHHhcC-----cccceEEEEecC---CCceEEEEEEcChH
Q 004977 586 VKLQHGEYISLGKVEAALISS-----DYVDNIMIHADP---FHNYCVALVVPSHK 632 (721)
Q Consensus 586 ik~~~G~~v~p~eIE~~l~~~-----p~V~~~~V~g~~---~~~~~~a~vv~~~~ 632 (721)
+.+. ||+++-.+|++++.+. -.+.+-++..+. .+.+.+-++.+...
T Consensus 399 l~l~-gEkl~e~~v~~av~~~~~~~~~~~~~f~~~~~~~~~~~~~Y~~~~e~~~~ 452 (528)
T PF03321_consen 399 LSLF-GEKLSEEQVQEAVARALQETGLELRDFTVAPDPSSGNPPHYVLFWELEGE 452 (528)
T ss_dssp E-SS-S--EEHHHHHHHHHHHHHCTT-EEEEEEEEEE--SSSSBEEEEEEEECS-
T ss_pred eecc-eeecCHHHHHHHHHHHHHhcCCceeeEEEEeecccCCCCceEEEEEeCCC
Confidence 9995 9999999999999764 335676676662 34555666665543
No 135
>PLN02249 indole-3-acetic acid-amido synthetase
Probab=97.86 E-value=0.0012 Score=73.86 Aligned_cols=137 Identities=15% Similarity=0.242 Sum_probs=80.2
Q ss_pred HhCCc---EEEEEecCCCCCHHHHHHHHHhh-CC-ccccccccccccccccccCCCCCCCCccCCC-cC-cceEEEEecC
Q 004977 442 VLGGR---IRFMICGGAPLSADSQRFINICM-GA-PIGQAYGLTETCAGSTFSEWDDPSVGRVGPP-VP-CCYIKLVSWD 514 (721)
Q Consensus 442 ~~~~~---lr~v~~gG~~l~~~~~~~~~~~~-g~-~l~~~YG~TE~~~~~~~~~~~~~~~~~vG~p-~p-~~~v~i~d~~ 514 (721)
.+.++ +..+..||.. .-...++..+ +. .+..+|++||+...+-..+. ..+..++.. ++ +.-...++.+
T Consensus 299 ~lWPnl~~i~~~~~G~~~---~Y~~~l~~~~g~~~~~~~~Y~ASEg~~gi~~~~~--~~p~~~~~~l~~~~~ffEFiP~~ 373 (597)
T PLN02249 299 KIWPNTKYLDVIVTGAMA---QYIPMLEYYSGGLPMASTIYASSESYFGINLNPM--CKPSEVSYTIMPNMAYFEFLPHN 373 (597)
T ss_pred HhCCCCCeEEEEecCChH---HHHHHHHHHcCCCccccccccccceEEEeecCCC--CCCCCcceEecCCcEEEEeeecc
Confidence 35577 7777777765 3345555444 33 46689999997543322111 111112221 12 3344444322
Q ss_pred CC-C-------c--ccCCCCCCcceEEEccccccccccCCCcccccccccCCCCcceEeeCcEEEEccC----CeEEEEe
Q 004977 515 EG-G-------Y--KTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVDERGMCWFYTGDIGQVYPD----GCLEIID 580 (721)
Q Consensus 515 ~~-~-------~--~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~~~g~gw~~TGDlg~~d~d----G~l~i~G 580 (721)
+. . . +..+..|+.-||+|... .|-| -|+.||+.++..- =.|.|+|
T Consensus 374 ~~~~~~~~~~~~v~l~eVe~G~~Y~lVvTT~---~GLy------------------RY~iGDvVrvtgf~~~~P~i~F~g 432 (597)
T PLN02249 374 HDGDGALDETSLVELADVEVGKEYELVITTY---AGLY------------------RYRVGDILRVTGFHNSAPQFKFIR 432 (597)
T ss_pred cCCcccCCCCcEecHHHcCCCCeEEEEEEcc---ccee------------------EeecCCEEEEeeccCCCcEEEEEc
Confidence 11 1 0 01134555566666432 1221 3889999998532 3699999
Q ss_pred cCCCeEEcCCeeeeechHHHHHHhc
Q 004977 581 RKKDIVKLQHGEYISLGKVEAALIS 605 (721)
Q Consensus 581 R~~d~ik~~~G~~v~p~eIE~~l~~ 605 (721)
|.+.++.+ .||++.-.+++.++.+
T Consensus 433 R~~~~ls~-~GEKl~e~~v~~Av~~ 456 (597)
T PLN02249 433 RKNVLLSI-ESDKTDEADLQKAVEN 456 (597)
T ss_pred cCCcceec-ccccCCHHHHHHHHHH
Confidence 99999998 5999999999998876
No 136
>PLN02247 indole-3-acetic acid-amido synthetase
Probab=97.65 E-value=0.0032 Score=69.91 Aligned_cols=142 Identities=18% Similarity=0.189 Sum_probs=82.5
Q ss_pred HHhCCcEEEEEecCCCCCHHHHHHHHHhh-CCccc-cccccccccccccccCCCCCCCCccCCCcCcce-EEEEecCCCC
Q 004977 441 AVLGGRIRFMICGGAPLSADSQRFINICM-GAPIG-QAYGLTETCAGSTFSEWDDPSVGRVGPPVPCCY-IKLVSWDEGG 517 (721)
Q Consensus 441 ~~~~~~lr~v~~gG~~l~~~~~~~~~~~~-g~~l~-~~YG~TE~~~~~~~~~~~~~~~~~vG~p~p~~~-v~i~d~~~~~ 517 (721)
..+.+++++|.+--..-...-...++... |++++ -+||+||+...+-..+..++. ......+|+.. ...++.+++.
T Consensus 289 ~rLWP~lk~I~~~~tGsm~~Y~~~L~~y~gglpl~s~~Y~sSE~~~ginl~p~~~p~-~~sy~L~p~~~yFEFip~~~~~ 367 (606)
T PLN02247 289 KRLWPRTKYIEVIVTGSMAQYIPTLEFYSGGLPLVSTMYASSECYFGINLKPLSDPS-DVSYTLLPNMAYFEFLPVDKNN 367 (606)
T ss_pred HHhCCCCcEEEEECCCCHHHHHHHHHHHcCCCceecccccccceEEEeccCcCCCcc-CCceeecCCcEEEEEeecCCCc
Confidence 45678888877643333444445555444 56655 589999976554433221111 12223334432 3344433321
Q ss_pred cc--------------------------cCCCCCCcceEEEccccccccccCCCcccccccccCCCCcceEeeCcEEEEc
Q 004977 518 YK--------------------------TSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVDERGMCWFYTGDIGQVY 571 (721)
Q Consensus 518 ~~--------------------------~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~~~g~gw~~TGDlg~~d 571 (721)
.. ..+..|+.-||+|... .|. =-|+.||+.+..
T Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~v~l~evk~G~~YelVvTt~---~GL------------------YRYrlGDvv~V~ 426 (606)
T PLN02247 368 GEVIHFVQCNGTDDDDDALKEDLEIVDLVDVKVGHYYELVVTTF---TGL------------------YRYRVGDILMVT 426 (606)
T ss_pred ccccccccccccccccccccccCceecHHHccCCCeEEEEEEec---Cce------------------EEEecCCEEEEe
Confidence 10 0133445555555321 111 138899998873
Q ss_pred ----cCCeEEEEecCCCeEEcCCeeeeechHHHHHHhc
Q 004977 572 ----PDGCLEIIDRKKDIVKLQHGEYISLGKVEAALIS 605 (721)
Q Consensus 572 ----~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~ 605 (721)
..=.|.|++|.+.+..+ .|++.+-.++-.++.+
T Consensus 427 GF~n~~P~~~Fv~R~~~vlsi-~gEK~tE~~l~~Av~~ 463 (606)
T PLN02247 427 GFYNNAPQFRFVQRRNVVLSI-DTDKTNEEDLLKAVTQ 463 (606)
T ss_pred eecCCCceEEEEecCCceeec-ccccCCHHHHHHHHHH
Confidence 33479999999999998 5999999999888865
No 137
>PLN02620 indole-3-acetic acid-amido synthetase
Probab=97.50 E-value=0.0097 Score=66.06 Aligned_cols=141 Identities=16% Similarity=0.170 Sum_probs=80.9
Q ss_pred HHhCCcEEEEEecCCCCCHHHHHHHHHhh-CCccc-cccccccccccccccCCCCCCCCcc-CCCcCcce-EEEEecCCC
Q 004977 441 AVLGGRIRFMICGGAPLSADSQRFINICM-GAPIG-QAYGLTETCAGSTFSEWDDPSVGRV-GPPVPCCY-IKLVSWDEG 516 (721)
Q Consensus 441 ~~~~~~lr~v~~gG~~l~~~~~~~~~~~~-g~~l~-~~YG~TE~~~~~~~~~~~~~~~~~v-G~p~p~~~-v~i~d~~~~ 516 (721)
..+.+++++|.+-...-...-...++... |++++ -+|++||+...+-..+. ..+..+ ...+|+.. ...++.+++
T Consensus 300 ~rLWP~lk~I~~~~tGsm~~Y~p~L~~y~gglpl~~~~Y~ASE~~~ginl~P~--~~p~~~sy~L~p~~~yFEFip~~~~ 377 (612)
T PLN02620 300 TRLWPNTKYVDVIVTGTMSQYIPTLDYYSNGLPLVCTMYASSECYFGVNLNPL--CKPSEVSYTLIPTMAYFEFLPVHRN 377 (612)
T ss_pred HHhCCCCcEEEEECCCCHHHHHHHHHHHcCCCccccccccccceEEEeccCCC--CCcccceeeecCCcEEEEEeeccCc
Confidence 45678888776644333344444554433 56654 68999997655433332 112222 23334432 233432211
Q ss_pred -C------------------c--ccCCCCCCcceEEEccccccccccCCCcccccccccCCCCcceEeeCcEEEEc----
Q 004977 517 -G------------------Y--KTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVDERGMCWFYTGDIGQVY---- 571 (721)
Q Consensus 517 -~------------------~--~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~~~g~gw~~TGDlg~~d---- 571 (721)
+ . ...+..|+.-||+|... .|. =-|+.||+.+..
T Consensus 378 ~~~~~~~~~~~~~~~~~~~~~v~l~ev~~G~~YelvvTt~---~GL------------------yRYrlGDvv~V~Gf~n 436 (612)
T PLN02620 378 NGVTNSISLPKSLNEKEQQELVDLVDVKLGQEYELVVTTY---AGL------------------YRYRVGDVLRVAGFKN 436 (612)
T ss_pred ccccccccccccccccccCccccHHHccCCCeEEEEEEec---Cce------------------EEEecCCEEEEeeecC
Confidence 0 0 00134455556665321 111 138899998884
Q ss_pred cCCeEEEEecCCCeEEcCCeeeeechHHHHHHhc
Q 004977 572 PDGCLEIIDRKKDIVKLQHGEYISLGKVEAALIS 605 (721)
Q Consensus 572 ~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~ 605 (721)
..=.|.|++|.+.+..+ .|++.+-.++-.++.+
T Consensus 437 ~~P~~~Fv~R~~~~lsi-~gEK~tE~~l~~Av~~ 469 (612)
T PLN02620 437 KAPQFSFICRKNVVLSI-DSDKTDEVELQNAVKN 469 (612)
T ss_pred CCceEEEEeecCceeec-ccccCCHHHHHHHHHH
Confidence 33479999999999998 5999999998887755
No 138
>PF14535 AMP-binding_C_2: AMP-binding enzyme C-terminal domain; PDB: 2Y27_A 2Y4N_A 3QOV_B 3S89_D 3LAX_A 2Y4O_B.
Probab=95.84 E-value=0.026 Score=47.24 Aligned_cols=88 Identities=13% Similarity=0.075 Sum_probs=47.7
Q ss_pred eeeeechHHHHHHhcCcccc-eE--EEEecCCCceEEEEEEcChHHHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHH
Q 004977 591 GEYISLGKVEAALISSDYVD-NI--MIHADPFHNYCVALVVPSHKALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSK 667 (721)
Q Consensus 591 G~~v~p~eIE~~l~~~p~V~-~~--~V~g~~~~~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 667 (721)
|.||+|..||++|.++|++. +. .|.-..+...+...|...++.. .+.....++.+.+.+.|++
T Consensus 1 GvnvfP~~Ie~vl~~~~~~~~~y~i~v~~~~~~D~l~v~vE~~~~~~--------------~~~~~~~~l~~~i~~~lk~ 66 (96)
T PF14535_consen 1 GVNVFPSQIEEVLREFPEVSPEYQIVVTREGGLDELTVRVELRPGFS--------------DDAEDLEALAERIAERLKE 66 (96)
T ss_dssp TEEE-HHHHHHHHCTSTTEEEEEEEEEEEETTEEEEEEEEEESTTCC--------------TTHHHHHHHHHHHHHHHHH
T ss_pred CcEECHHHHHHHHHhCcCCCCcEEEEEEcCCCCcEEEEEEEECCccC--------------cchHHHHHHHHHHHHHHHh
Confidence 78999999999999999998 32 2332333345666666665320 0011133455556666665
Q ss_pred HHHHCCCCCcccccEEEeeCCCCCCCCCccCcccccCh
Q 004977 668 VAKAAKLDKFEIPAKIKLMPEPWTPEAGLVTAALKIKR 705 (721)
Q Consensus 668 ~~~~~~L~~~~~P~~i~~~~~~~~p~~~~~t~~gKi~R 705 (721)
.+. +-..|.+++. ...++| .||.+|
T Consensus 67 ~lg--------v~~~V~lv~~----gtLpr~-~~K~~R 91 (96)
T PF14535_consen 67 RLG--------VRPEVELVPP----GTLPRS-EGKAKR 91 (96)
T ss_dssp HHS--------S-EEEEEE-T----T-S----SSSS-S
T ss_pred hcC--------ceEEEEEECC----CCccCC-CCcceE
Confidence 553 2236777764 222276 678776
No 139
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=94.55 E-value=0.22 Score=53.17 Aligned_cols=91 Identities=14% Similarity=0.024 Sum_probs=76.0
Q ss_pred EEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEccCcH--hHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEE
Q 004977 129 EWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCV--EWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTL 206 (721)
Q Consensus 129 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~--e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~v 206 (721)
-.+|+.+....+..+|+.|...|..+||+|.++..-+. .-+-..+|+.++|+.++|+.+ -.-++...++++.++.++
T Consensus 108 ~~~t~~D~~~wa~~~aR~~~~~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vip~~~-g~~~~~~~l~~df~~tvI 186 (438)
T COG1541 108 FGYTAKDIERWAELLARSLYSAGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVIPISG-GNTERQLELMKDFKPTVI 186 (438)
T ss_pred eecCHHHHHHHHHHHHHHHHHccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEEccCC-ccHHHHHHHHHhcCCcEE
Confidence 46899999999999999999999999999988877221 116788999999999999988 345677789999999999
Q ss_pred EECccchhHHHhhh
Q 004977 207 ICDSKQLKKLSAVS 220 (721)
Q Consensus 207 i~~~~~~~~~~~~~ 220 (721)
.+.+...-.+.+..
T Consensus 187 ~~tps~~l~lae~~ 200 (438)
T COG1541 187 AATPSYLLYLAEEA 200 (438)
T ss_pred EEChHHHHHHHHHH
Confidence 99998876665544
No 140
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=87.09 E-value=6.6 Score=43.22 Aligned_cols=85 Identities=14% Similarity=0.102 Sum_probs=65.7
Q ss_pred EEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEccCcHh--HHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEE
Q 004977 129 EWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVE--WFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTL 206 (721)
Q Consensus 129 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e--~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~v 206 (721)
..+|..++...+..++..+...|+.+||++.++.+.+.. .....+++.+.|+.++|... .+....++++.++.++
T Consensus 104 v~~T~~dl~~~~~~~~r~~~~~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~~~---~~~~~~~i~~~~~t~l 180 (445)
T TIGR03335 104 FFLTWDDWKRYAEKYARSFVSQGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPEGK---CTFPIRIIESYRPTGI 180 (445)
T ss_pred eeecHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcCCc---hhHHHHHHHHhCCCEE
Confidence 457999999888888988888999999999998876542 23456788999998887643 2345678899999999
Q ss_pred EECccchhHH
Q 004977 207 ICDSKQLKKL 216 (721)
Q Consensus 207 i~~~~~~~~~ 216 (721)
++.......+
T Consensus 181 ~~~ps~ll~L 190 (445)
T TIGR03335 181 VASVFKLLRL 190 (445)
T ss_pred EECHHHHHHH
Confidence 8877654333
No 141
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=87.04 E-value=6.2 Score=43.00 Aligned_cols=88 Identities=11% Similarity=0.033 Sum_probs=67.9
Q ss_pred EeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEccCcH--hHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEE
Q 004977 130 WQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCV--EWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLI 207 (721)
Q Consensus 130 ~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~--e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi 207 (721)
.+|..++......++..+...|+++||++........ ......+++...|+.++++.... .+.+...|++.++++++
T Consensus 94 ~~t~~~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~i~~~~~t~l~ 172 (422)
T TIGR02155 94 GYTQNDIDTWSSVVARSIRAAGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPISGGQ-TEKQVQLIQDFKPDIIM 172 (422)
T ss_pred ccCHHHHHHHHHHHHHHHHHcCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEecCCCC-HHHHHHHHHHHCCCEEE
Confidence 4688888777777788888889999999887665432 22234677889999999987654 57788999999999999
Q ss_pred ECccchhHHHh
Q 004977 208 CDSKQLKKLSA 218 (721)
Q Consensus 208 ~~~~~~~~~~~ 218 (721)
+.+.....+.+
T Consensus 173 ~~Ps~l~~L~~ 183 (422)
T TIGR02155 173 VTPSYMLNLLE 183 (422)
T ss_pred EcHHHHHHHHH
Confidence 99887655543
No 142
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=73.74 E-value=41 Score=37.45 Aligned_cols=99 Identities=11% Similarity=0.151 Sum_probs=72.1
Q ss_pred EEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEccCcH--hHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEE
Q 004977 129 EWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCV--EWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTL 206 (721)
Q Consensus 129 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~--e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~v 206 (721)
..+|+..+...+..+... .+++++|++...++-.. .+...+++++..|+.+++. +...++.+...+++.++.++
T Consensus 184 v~~s~~~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~-~~~~~~~~~~~i~~~~~t~~ 259 (513)
T PRK07656 184 AMLTHRQLLSNAADWAEY---LGLTEGDRYLAANPFFHVFGYKAGVNAPLMRGATILPL-PVFDPDEVFRLIETERITVL 259 (513)
T ss_pred EEEecHHHHHHHHHHHHh---hCCCCCCeEEEccchHHHHHHHHHHHHHHHcCceEEec-CcCCHHHHHHHHHHhCCeEE
Confidence 468999887666554433 47899999988877543 3455688999999988875 56788999999999999999
Q ss_pred EECccchhHHHhhhh----cCCCccEEEE
Q 004977 207 ICDSKQLKKLSAVSS----SLKTIKNVIY 231 (721)
Q Consensus 207 i~~~~~~~~~~~~~~----~~~~~~~ii~ 231 (721)
+..+.....+..... .++.++.++.
T Consensus 260 ~~~p~~~~~l~~~~~~~~~~~~~l~~v~~ 288 (513)
T PRK07656 260 PGPPTMYNSLLQHPDRSAEDLSSLRLAVT 288 (513)
T ss_pred echHHHHHHHHcCCCcCCCCccceeeEEe
Confidence 998887766554321 2345555554
No 143
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=68.73 E-value=53 Score=35.62 Aligned_cols=97 Identities=11% Similarity=0.119 Sum_probs=70.3
Q ss_pred EEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEccCcHh-HHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEE
Q 004977 129 EWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVE-WFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLI 207 (721)
Q Consensus 129 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e-~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi 207 (721)
..+|++.+...+..++.. .+++++|++...++-..- .+..+++++..|+..+..++. +.+...+++.++.++.
T Consensus 129 v~~s~~~~~~~~~~~~~~---~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~---~~~~~~l~~~~~t~~~ 202 (436)
T TIGR01923 129 VPHTFRNHYASAVGSKEN---LGFTEDDNWLLSLPLYHISGLSILFRWLIEGATLRIVDKF---NQLLEMIANERVTHIS 202 (436)
T ss_pred EEEehHHHHHHHHHHHhh---cCCCCCceEEEccCcHhHHHHHHHHHHHhcCceEEecchH---HHHHHHHHHhCCeEEE
Confidence 468999988877766654 478999999888775422 233567888999988877543 4888899999999999
Q ss_pred ECccchhHHHhhhhcCCCccEEEE
Q 004977 208 CDSKQLKKLSAVSSSLKTIKNVIY 231 (721)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~ii~ 231 (721)
..+.....+.......+.++.++.
T Consensus 203 ~~P~~l~~l~~~~~~~~~l~~~~~ 226 (436)
T TIGR01923 203 LVPTQLNRLLDEGGHNENLRKILL 226 (436)
T ss_pred eHHHHHHHHHhCcCCCCceEEEEE
Confidence 988877655544333355666655
No 144
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=68.44 E-value=65 Score=34.65 Aligned_cols=122 Identities=17% Similarity=0.124 Sum_probs=83.7
Q ss_pred CCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHh-CCCCCCCEEEEEccCc--HhHHHH
Q 004977 95 HPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVN-FGHNVDTRAAILAETC--VEWFIA 171 (721)
Q Consensus 95 ~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~-~Gv~~gd~V~i~~~n~--~e~~~~ 171 (721)
.|+.+|++... .|.+ .......+|++.+...+..+. +.. .+++ |++..++|-+ ..++..
T Consensus 153 ~~~~~~~i~~T----------SGTT----G~pK~v~~t~~~~~~~~~~~~--~~~~~~~~--d~~l~~~p~~~~~g~~~~ 214 (417)
T PF00501_consen 153 SPDDPAFILFT----------SGTT----GKPKGVVLTHRNLLAQARALA--LPEYFGLG--DRILSFLPLSHIFGLISA 214 (417)
T ss_dssp TTTSEEEEEEE----------SSSS----SSEEEEEEEHHHHHHHHHHHH--HHHTTTTT--TEEEESS-TTSHHHHHHH
T ss_pred CccceeEeecc----------cccc----ccccccccccccccccccccc--cccccccC--ceEEeecccccccccccc
Confidence 57888887642 3330 001235789999999988877 433 2333 6666666654 344478
Q ss_pred HHHHHhcCCEEEEecCCCC--HHHHHHHHHhcCceEEEECccchhHHHhhh--------hcCCCccEEEEecC
Q 004977 172 FQGCFRQSITVVTIYSSLG--EDALIHSLNETQVTTLICDSKQLKKLSAVS--------SSLKTIKNVIYFEN 234 (721)
Q Consensus 172 ~lA~~~~G~~~vpl~~~~~--~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~--------~~~~~~~~ii~~~~ 234 (721)
+++++..|+..+..+.... ++.+...+++.+++.+++.+..+..+.+.. ..++.++.++..+.
T Consensus 215 ~~~~l~~G~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~~~~~l~~lr~v~~~G~ 287 (417)
T PF00501_consen 215 LLAALFSGATLVLPSPFDLFDPESLLELISRYKPTILFAVPSMLEALLQSPEEKTKISKKDLSSLRTVISGGE 287 (417)
T ss_dssp HHHHHHCTSEEEEESSHHHHHHHHHHHHHHHHTESEEEEEHHHHHHHHHHHHTTHHGTTTTGTT-SEEEEESS
T ss_pred ccccccccccccccccccccccccchhcccccccccccccccccccccccccccccccccccccccccccccc
Confidence 8999999999998876644 577889999999999999998887776522 14667888777443
No 145
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=66.86 E-value=51 Score=36.67 Aligned_cols=100 Identities=10% Similarity=0.032 Sum_probs=72.0
Q ss_pred EEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEccCcHhH-HHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEE
Q 004977 129 EWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVEW-FIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLI 207 (721)
Q Consensus 129 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~-~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi 207 (721)
..+|++.+...+..... ..+++++|++...++....+ +...++++..|+..+..+.. +++.+...+++.++..++
T Consensus 185 v~~t~~~l~~~~~~~~~---~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~~-~~~~~~~~l~~~~~t~l~ 260 (521)
T PRK06187 185 VVLSHRNLFLHSLAVCA---WLKLSRDDVYLVIVPMFHVHAWGLPYLALMAGAKQVIPRRF-DPENLLDLIETERVTFFF 260 (521)
T ss_pred EEeehHHHHHHHHHHHH---hhCCCCCCEEEEeCCchHHhhHHHHHHHHHhCCEEEecCCC-CHHHHHHHHHHhCCeEEE
Confidence 46899988876666555 45889999999888765332 33445588899988877664 889999999999999999
Q ss_pred ECccchhHHHhhhh----cCCCccEEEEe
Q 004977 208 CDSKQLKKLSAVSS----SLKTIKNVIYF 232 (721)
Q Consensus 208 ~~~~~~~~~~~~~~----~~~~~~~ii~~ 232 (721)
+.+.....+..... ..+.++.++..
T Consensus 261 ~~p~~~~~l~~~~~~~~~~~~~l~~v~~~ 289 (521)
T PRK06187 261 AVPTIWQMLLKAPRAYFVDFSSLRLVIYG 289 (521)
T ss_pred chHHHHHHHHcCcCCCccCcchhhEEEEc
Confidence 99887765544322 23456665553
No 146
>PRK12583 acyl-CoA synthetase; Provisional
Probab=63.84 E-value=87 Score=35.32 Aligned_cols=84 Identities=14% Similarity=0.202 Sum_probs=63.7
Q ss_pred EEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEccC--cHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEE
Q 004977 129 EWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAET--CVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTL 206 (721)
Q Consensus 129 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n--~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~v 206 (721)
..+|++.+...+..+... .+++++|++....+- ...++..+++++..|+.++.......+..+...+++.++.++
T Consensus 219 v~~s~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~v~~~~~~~~~~~~~~~i~~~~~t~l 295 (558)
T PRK12583 219 ATLSHHNILNNGYFVAES---LGLTEHDRLCVPVPLYHCFGMVLANLGCMTVGACLVYPNEAFDPLATLQAVEEERCTAL 295 (558)
T ss_pred EEeeHHHHHHHHHHHHHH---hCCCCCCeEEEecCchhhhhHHHHHHHHHhcCceEEeecCCCCHHHHHHHHHHcCCeEE
Confidence 468998886655554443 478899999877764 355667778889999988855556788888999999999999
Q ss_pred EECccchhH
Q 004977 207 ICDSKQLKK 215 (721)
Q Consensus 207 i~~~~~~~~ 215 (721)
+..+.....
T Consensus 296 ~~~P~~~~~ 304 (558)
T PRK12583 296 YGVPTMFIA 304 (558)
T ss_pred eccHHHHHH
Confidence 888876543
No 147
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=62.78 E-value=1.5e+02 Score=31.71 Aligned_cols=102 Identities=20% Similarity=0.139 Sum_probs=75.5
Q ss_pred EEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEccCcHh-HHHHHHHHHhcCCEEEEecCCCC--HHHHHHHHHhcCceE
Q 004977 129 EWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVE-WFIAFQGCFRQSITVVTIYSSLG--EDALIHSLNETQVTT 205 (721)
Q Consensus 129 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e-~~~~~lA~~~~G~~~vpl~~~~~--~~~l~~~l~~~~~~~ 205 (721)
..+|++.+...+..+.. ..+++++|++....+.... .+..+++.+..|+..+..+.... +..+..+++..+++.
T Consensus 138 v~~s~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~ 214 (408)
T TIGR01733 138 VVVTHRSLVNLLAWLAR---RYGLDPDDRVLQFASLSFDASVEEIFGTLLAGATLVVPPEDEERDAALLAALIAEHPVTV 214 (408)
T ss_pred EEeccHHHHHHHHHHHH---hcCCCCCceEEEecCCccchhHHHHHHHHhCCCEEEEcChhhccCHHHHHHHHHHcCceE
Confidence 46788888877666655 4477889999888776543 45567888888988887766554 788999999999999
Q ss_pred EEECccchhHHHhhh-hcCCCccEEEEec
Q 004977 206 LICDSKQLKKLSAVS-SSLKTIKNVIYFE 233 (721)
Q Consensus 206 vi~~~~~~~~~~~~~-~~~~~~~~ii~~~ 233 (721)
+++.+.....+.+.. ...+.++.++..+
T Consensus 215 l~~~p~~~~~l~~~~~~~~~~l~~v~~~g 243 (408)
T TIGR01733 215 LNLTPSLLALLAAALPPALASLRLVILGG 243 (408)
T ss_pred EEeCHHHHHHHHHhhhhcccCceEEEEeC
Confidence 999998877665543 3455677766644
No 148
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=62.50 E-value=1.5e+02 Score=33.45 Aligned_cols=100 Identities=14% Similarity=0.091 Sum_probs=70.1
Q ss_pred EEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEccCc--HhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEE
Q 004977 129 EWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETC--VEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTL 206 (721)
Q Consensus 129 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~--~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~v 206 (721)
..+|++.+...+.... ...++.++|++..++|-. ..+...++..+..|+..+.......++.+...|++.++.++
T Consensus 201 V~~th~~l~~~~~~~~---~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~~t~~ 277 (539)
T PRK06334 201 VPLTHANLLANQRACL---KFFSPKEDDVMMSFLPPFHAYGFNSCTLFPLLSGVPVVFAYNPLYPKKIVEMIDEAKVTFL 277 (539)
T ss_pred EEEcHHHHHHHHHHHH---HhcCCCCCceEEEecchHhhhhhHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHHhCCcEE
Confidence 4689988876544433 345788999988887743 23333457778888887776556788999999999999999
Q ss_pred EECccchhHHHhhh----hcCCCccEEEE
Q 004977 207 ICDSKQLKKLSAVS----SSLKTIKNVIY 231 (721)
Q Consensus 207 i~~~~~~~~~~~~~----~~~~~~~~ii~ 231 (721)
...+.....+.... ..++.++.++.
T Consensus 278 ~~~P~~~~~l~~~~~~~~~~~~~lr~i~~ 306 (539)
T PRK06334 278 GSTPVFFDYILKTAKKQESCLPSLRFVVI 306 (539)
T ss_pred EecHHHHHHHHHhhhhcccccccccEEEE
Confidence 99988776554322 23456666665
No 149
>PRK08315 AMP-binding domain protein; Validated
Probab=60.22 E-value=76 Score=35.82 Aligned_cols=85 Identities=13% Similarity=0.135 Sum_probs=64.4
Q ss_pred EEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEccC--cHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEE
Q 004977 129 EWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAET--CVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTL 206 (721)
Q Consensus 129 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n--~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~v 206 (721)
..+|++.+...+..+... .+++++|++....+- ...++..+++++..|+..+.......+..+...+++.+++++
T Consensus 217 v~~s~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~l~~~~~t~~ 293 (559)
T PRK08315 217 ATLTHRNILNNGYFIGEA---MKLTEEDRLCIPVPLYHCFGMVLGNLACVTHGATMVYPGEGFDPLATLAAVEEERCTAL 293 (559)
T ss_pred EEeeHHHHHHHHHHHHHh---cCCCCCceEEEecCcHHHHHHHHHHHHHHhccceEEEecCCCCHHHHHHHHHHcCCeEE
Confidence 467888886655544433 488999999887775 345566778899999988866667788899999999999999
Q ss_pred EECccchhHH
Q 004977 207 ICDSKQLKKL 216 (721)
Q Consensus 207 i~~~~~~~~~ 216 (721)
+..+.....+
T Consensus 294 ~~~P~~~~~~ 303 (559)
T PRK08315 294 YGVPTMFIAE 303 (559)
T ss_pred ecchHHHHHH
Confidence 9887765433
No 150
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=58.61 E-value=1.4e+02 Score=33.82 Aligned_cols=101 Identities=10% Similarity=0.050 Sum_probs=69.9
Q ss_pred EEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEccCcHh--HHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEE
Q 004977 129 EWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVE--WFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTL 206 (721)
Q Consensus 129 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e--~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~v 206 (721)
..+|++.+...+.. .....+++++|++....+.... ....+++.+..|+..+.......++.+...+++.+++++
T Consensus 223 V~~s~~~l~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~ 299 (570)
T PRK04319 223 VLHVHNAMLQHYQT---GKYVLDLHEDDVYWCTADPGWVTGTSYGIFAPWLNGATNVIDGGRFSPERWYRILEDYKVTVW 299 (570)
T ss_pred EEEecHHHHHHHHH---HHHhcCCCCCceEEecCChHHhhCchHHHHHHHhcCceEEEECCCCCHHHHHHHHHHcCCeEE
Confidence 35788877654433 3344578899987665554432 244577888999988887777889999999999999999
Q ss_pred EECccchhHHHhhh------hcCCCccEEEEe
Q 004977 207 ICDSKQLKKLSAVS------SSLKTIKNVIYF 232 (721)
Q Consensus 207 i~~~~~~~~~~~~~------~~~~~~~~ii~~ 232 (721)
+..+.....+.... ..++.++.++..
T Consensus 300 ~~~P~~~~~l~~~~~~~~~~~~~~~lr~~~~g 331 (570)
T PRK04319 300 YTAPTAIRMLMGAGDDLVKKYDLSSLRHILSV 331 (570)
T ss_pred EeCHHHHHHHHhcCCcccccCCcccceEEEEc
Confidence 99988776665422 123456655553
No 151
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=57.49 E-value=1e+02 Score=34.17 Aligned_cols=86 Identities=17% Similarity=0.127 Sum_probs=66.6
Q ss_pred EEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEccCcHh-HHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEE
Q 004977 129 EWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVE-WFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLI 207 (721)
Q Consensus 129 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e-~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi 207 (721)
..+|+..+...+..+... .++.++|++...++-+.. .+..+++++..|+..+.. +...++.+...+++.++.++.
T Consensus 179 v~~t~~~l~~~~~~~~~~---~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~-~~~~~~~~~~~i~~~~~t~~~ 254 (515)
T TIGR03098 179 VVLSHRNLVAGAQSVATY---LENRPDDRLLAVLPLSFDYGFNQLTTAFYVGATVVLH-DYLLPRDVLKALEKHGITGLA 254 (515)
T ss_pred EEEecHHHHHHHHHHHHH---hCCCcccEEEEECchhhHhHHHHHHHHHHcCCEEEEc-CCCCHHHHHHHHHHcCCceEe
Confidence 467999887776665544 367899999988886543 245677889999988865 557789999999999999999
Q ss_pred ECccchhHHHh
Q 004977 208 CDSKQLKKLSA 218 (721)
Q Consensus 208 ~~~~~~~~~~~ 218 (721)
..+.....+..
T Consensus 255 ~~P~~~~~l~~ 265 (515)
T TIGR03098 255 AVPPLWAQLAQ 265 (515)
T ss_pred cChHHHHHHHh
Confidence 99987766654
No 152
>PLN03051 acyl-activating enzyme; Provisional
Probab=55.38 E-value=1.1e+02 Score=34.15 Aligned_cols=87 Identities=9% Similarity=-0.154 Sum_probs=61.3
Q ss_pred EEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEccCcHh-HHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEE
Q 004977 129 EWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVE-WFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLI 207 (721)
Q Consensus 129 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e-~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi 207 (721)
..+|++.+...+... ....++.++|++...++-... .+..+++++..|+..+.......++.+...+++.++.++.
T Consensus 137 V~~sh~~~~~~~~~~---~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~t~v~~~~~~~~~~~~~~i~~~~vt~~~ 213 (499)
T PLN03051 137 IPWTHLSPLRCASDG---WAHMDIQPGDVVCWPTNLGWMMGPWLLYSAFLNGATLALYGGAPLGRGFGKFVQDAGVTVLG 213 (499)
T ss_pred EEEccchHHHHHHHH---HHhcCCCCCCEEEEccCcceeeehHHHHHHHHcCCEEEecCCCCCcHHHHHHHHHhCCcEEE
Confidence 356777765443322 234578899988776664321 1235678889999988776555678899999999999999
Q ss_pred ECccchhHHHh
Q 004977 208 CDSKQLKKLSA 218 (721)
Q Consensus 208 ~~~~~~~~~~~ 218 (721)
..+.....+..
T Consensus 214 ~vP~~~~~l~~ 224 (499)
T PLN03051 214 LVPSIVKAWRH 224 (499)
T ss_pred eCHHHHHHHHh
Confidence 98887765543
No 153
>PRK08308 acyl-CoA synthetase; Validated
Probab=54.84 E-value=2.5e+02 Score=30.18 Aligned_cols=99 Identities=10% Similarity=0.076 Sum_probs=69.5
Q ss_pred EEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEccCcH--hHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEE
Q 004977 129 EWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCV--EWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTL 206 (721)
Q Consensus 129 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~--e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~v 206 (721)
..+|++.+...+..+.. ..++..+|++...++-.. .++..++.++..|+..+... ...++.+...+++.++.++
T Consensus 119 v~~s~~~l~~~~~~~~~---~~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~l~~~~~t~~ 194 (414)
T PRK08308 119 IRRSWTEIDREIEAYNE---ALNCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVIIT-NKNPKFALNILRNTPQHIL 194 (414)
T ss_pred EEEehHhHHHHHHHHHH---hhCCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecC-CCCHHHHHHHHHHhCCeEE
Confidence 46799988766655544 346778898887776653 44566888999999887764 4567888899999999999
Q ss_pred EECccchhHHHhhhhcCCCccEEEE
Q 004977 207 ICDSKQLKKLSAVSSSLKTIKNVIY 231 (721)
Q Consensus 207 i~~~~~~~~~~~~~~~~~~~~~ii~ 231 (721)
+..+.....+.........++.++.
T Consensus 195 ~~~P~~~~~l~~~~~~~~~l~~~~~ 219 (414)
T PRK08308 195 YAVPLMLHILGRLLPGTFQFHAVMT 219 (414)
T ss_pred EcCHHHHHHHHhcCCccccccEEEE
Confidence 9888777666544322234454443
No 154
>PRK07638 acyl-CoA synthetase; Validated
Probab=52.54 E-value=2e+02 Score=31.73 Aligned_cols=87 Identities=8% Similarity=0.047 Sum_probs=64.0
Q ss_pred EEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEccCcHh-HHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEE
Q 004977 129 EWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVE-WFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLI 207 (721)
Q Consensus 129 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e-~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi 207 (721)
..+|.+.+...+...+ ...+++++|++....+-... ++...+..+..|+..+.. +...++++...+++.+++++.
T Consensus 161 v~~s~~~~~~~~~~~~---~~~~~~~~d~~~~~~~l~~~~~l~~~~~~l~~g~~~~~~-~~~~~~~~~~~i~~~~~t~~~ 236 (487)
T PRK07638 161 FLRAQQSWLHSFDCNV---HDFHMKREDSVLIAGTLVHSLFLYGAISTLYVGQTVHLM-RKFIPNQVLDKLETENISVMY 236 (487)
T ss_pred EEEecHHHHHHHHHHH---HhcCcCCCCEEEEeecchHHHHHHHHHHHHccCcEEEEc-CCCCHHHHHHHHHHcCCeEEE
Confidence 3577877765554433 34578899998877665433 345566778889888755 567889999999999999999
Q ss_pred ECccchhHHHhh
Q 004977 208 CDSKQLKKLSAV 219 (721)
Q Consensus 208 ~~~~~~~~~~~~ 219 (721)
..+.....+...
T Consensus 237 ~~P~~~~~l~~~ 248 (487)
T PRK07638 237 TVPTMLESLYKE 248 (487)
T ss_pred eCcHHHHHHHhC
Confidence 999887766654
No 155
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=50.78 E-value=2.2e+02 Score=32.26 Aligned_cols=99 Identities=10% Similarity=0.121 Sum_probs=68.0
Q ss_pred EEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEccCcHh-HHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEE
Q 004977 129 EWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVE-WFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLI 207 (721)
Q Consensus 129 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e-~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi 207 (721)
..+|++.+...+.... ...++.++|++..++|-... -+...++.+..|+..+.. +.+.+..+...+++.++.++.
T Consensus 190 V~~s~~~~~~~~~~~~---~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~v~~-~~~~~~~~~~~i~~~~vt~~~ 265 (563)
T PLN02860 190 VTISHSALIVQSLAKI---AIVGYGEDDVYLHTAPLCHIGGLSSALAMLMVGACHVLL-PKFDAKAALQAIKQHNVTSMI 265 (563)
T ss_pred EEeehHHHHHHHHHHH---hhcCCCCCCEEEEecCchhhccHHHHHHHHHcCceEEec-CCCCHHHHHHHHHHhCCeeEE
Confidence 3678887765544433 34578999998888775432 223467778888877765 567889999999999999999
Q ss_pred ECccchhHHHhhh------hcCCCccEEEE
Q 004977 208 CDSKQLKKLSAVS------SSLKTIKNVIY 231 (721)
Q Consensus 208 ~~~~~~~~~~~~~------~~~~~~~~ii~ 231 (721)
..+.....+.... ...+.++.++.
T Consensus 266 ~~P~~~~~l~~~~~~~~~~~~~~~lr~~~~ 295 (563)
T PLN02860 266 TVPAMMADLISLTRKSMTWKVFPSVRKILN 295 (563)
T ss_pred eChHHHHHHHHhhhhhhccccccceeEEEe
Confidence 9988766554322 22345665554
No 156
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=49.86 E-value=1.8e+02 Score=33.68 Aligned_cols=85 Identities=12% Similarity=-0.005 Sum_probs=59.3
Q ss_pred hCCCCCCCEEEEEccCcHhHHHHHHHHHhcCCEEEEecC---CCCHHHHHHHHHhcCceEEEECccchhHHHhhh-----
Q 004977 149 NFGHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYS---SLGEDALIHSLNETQVTTLICDSKQLKKLSAVS----- 220 (721)
Q Consensus 149 ~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~---~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~----- 220 (721)
..+++++|++..+.+.+......+++++..|+..+..+. ...++.+..++++.+++++.+.+.....+....
T Consensus 299 ~~~~~~~d~~~~~~~~~~~~~~~~~~~L~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~ 378 (655)
T PRK03584 299 HCDLGPGDRFFWYTTCGWMMWNWLVSGLLVGATLVLYDGSPFYPDPNVLWDLAAEEGVTVFGTSAKYLDACEKAGLVPGE 378 (655)
T ss_pred hcCCCCCCEEEEcCCchHHhHHHHHHHHHcCCEEEEeCCCCCCCCHHHHHHHHHHHCCEEEEcCHHHHHHHHhcCCCccc
Confidence 347889999877766654443456788999999887753 245788999999999999988887766554321
Q ss_pred -hcCCCccEEEEec
Q 004977 221 -SSLKTIKNVIYFE 233 (721)
Q Consensus 221 -~~~~~~~~ii~~~ 233 (721)
..++.++.++..+
T Consensus 379 ~~~l~sLr~i~~~G 392 (655)
T PRK03584 379 THDLSALRTIGSTG 392 (655)
T ss_pred cCChhheEEEEEec
Confidence 1234566665543
No 157
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=49.36 E-value=1.6e+02 Score=33.11 Aligned_cols=101 Identities=10% Similarity=-0.014 Sum_probs=65.9
Q ss_pred EEeeHHHHHHHHHHHHHHH-HhCCCCCCCEEEEEccCcHhH-HHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEE
Q 004977 129 EWQTYGEVFDRACSFASGL-VNFGHNVDTRAAILAETCVEW-FIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTL 206 (721)
Q Consensus 129 ~~~Ty~el~~~v~~lA~~L-~~~Gv~~gd~V~i~~~n~~e~-~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~v 206 (721)
..+|...+...+ .+..+ ...++.++|++..+++-.-.+ ....++++..|+..+...+...++.+..++++.++..+
T Consensus 194 v~~s~~~~~~~~--~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~vt~~ 271 (539)
T PRK07008 194 ALYSHRSTVLHA--YGAALPDAMGLSARDAVLPVVPMFHVNAWGLPYSAPLTGAKLVLPGPDLDGKSLYELIEAERVTFS 271 (539)
T ss_pred EEEecHHHHHHH--HHhhcccccCCCCCceEEecCchHHhhhHHHHHHHHhcCceEEEecCCcCHHHHHHHHHHcCCEEE
Confidence 356766654322 22223 235788999988777654322 23346778899988877777888999999999999999
Q ss_pred EECccchhHHHhhh----hcCCCccEEEE
Q 004977 207 ICDSKQLKKLSAVS----SSLKTIKNVIY 231 (721)
Q Consensus 207 i~~~~~~~~~~~~~----~~~~~~~~ii~ 231 (721)
...+.....+.+.. ...+.++.++.
T Consensus 272 ~~~P~~~~~l~~~~~~~~~~~~~l~~~~~ 300 (539)
T PRK07008 272 AGVPTVWLGLLNHMREAGLRFSTLRRTVI 300 (539)
T ss_pred EechHHHHHHHhcccccCCCcccceEEEE
Confidence 88887765554322 12345555544
No 158
>PRK07788 acyl-CoA synthetase; Validated
Probab=47.10 E-value=1.2e+02 Score=34.13 Aligned_cols=100 Identities=10% Similarity=0.066 Sum_probs=67.4
Q ss_pred EeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEccCcHhH-HHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEE
Q 004977 130 WQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVEW-FIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLIC 208 (721)
Q Consensus 130 ~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~-~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~ 208 (721)
.+|+..+...+. ......++.++|++...+|-...+ +..+++++..|+.++.. ....++++...+++.++.+++.
T Consensus 226 ~~s~~~~~~~~~---~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~l~~G~~~v~~-~~~~~~~~~~~i~~~~vt~~~~ 301 (549)
T PRK07788 226 PRPEPSPLAPLA---GLLSRVPFRAGETTLLPAPMFHATGWAHLTLAMALGSTVVLR-RRFDPEATLEDIAKHKATALVV 301 (549)
T ss_pred eccCccHHHHHH---HHHhhCCCCcCCeEEEccchHHHHHHHHHHHHHHhCCEEEEC-CCCCHHHHHHHHHHhCCcEEEE
Confidence 466666654433 334456788999988777654332 23356677888887765 5678889999999999999999
Q ss_pred CccchhHHHhhhh------cCCCccEEEEec
Q 004977 209 DSKQLKKLSAVSS------SLKTIKNVIYFE 233 (721)
Q Consensus 209 ~~~~~~~~~~~~~------~~~~~~~ii~~~ 233 (721)
.+.....+..... .++.++.++..+
T Consensus 302 ~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG 332 (549)
T PRK07788 302 VPVMLSRILDLGPEVLAKYDTSSLKIIFVSG 332 (549)
T ss_pred HHHHHHHHHhCcccccCCCCCCceeEEEEeC
Confidence 9887766554322 245666666543
No 159
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=46.82 E-value=74 Score=31.20 Aligned_cols=54 Identities=9% Similarity=0.052 Sum_probs=44.9
Q ss_pred HhCCCCCCCEEEEEccCcH--hHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCc
Q 004977 148 VNFGHNVDTRAAILAETCV--EWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQV 203 (721)
Q Consensus 148 ~~~Gv~~gd~V~i~~~n~~--e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~ 203 (721)
...|+.++|++. .+|-.. -+...+++++..|+..|.+ +++.++++-..+++.++
T Consensus 171 ~~~~l~~~D~~l-~~Pl~H~~gl~~~~~~~l~~G~t~v~~-~rFd~~~~l~~i~~~~v 226 (227)
T TIGR03089 171 RAAGLPPGDRVL-VLAWTDLEDFLATLLAPLAAGGSLVLV-THPDPARLDQIAETERV 226 (227)
T ss_pred hhcCCCCCCeEE-ecCCCchHHHHHHHHHHhccCceEEEe-cCCCHHHHHHHHHhhcC
Confidence 567899999999 888753 4456789999999999888 68999999988888765
No 160
>COG4009 Uncharacterized protein conserved in archaea [Function unknown]
Probab=44.63 E-value=86 Score=24.60 Aligned_cols=65 Identities=22% Similarity=0.194 Sum_probs=52.8
Q ss_pred EeeHHHHHHHHHHHHH---HHHhCCCCCCCEEEEEccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceE
Q 004977 130 WQTYGEVFDRACSFAS---GLVNFGHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTT 205 (721)
Q Consensus 130 ~~Ty~el~~~v~~lA~---~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~ 205 (721)
..||+||.+.-..++. +|.+..++..|.|+|+.-++.. ..-++.++...+.+++..-+++.++++
T Consensus 9 i~t~keL~eE~~~Fv~~kA~l~k~~L~dDde~aIfnI~gT~-----------Sy~V~Fl~~~~s~eev~~ele~mga~i 76 (88)
T COG4009 9 IATYKELDEELKDFVRLKAHLAKVDLNDDDELAIFNIEGTS-----------SYYVVFLEEVESEEEVERELEDMGAEI 76 (88)
T ss_pred heeHHhhhHHHHHHHHHHHHhcccccCCCCcEEEEEecCce-----------eEEEEEEeccCCHHHHHHHHHHhCchh
Confidence 3799999998877654 5666788999999999877643 235678889999999999999998875
No 161
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=42.95 E-value=3.7e+02 Score=30.13 Aligned_cols=99 Identities=9% Similarity=0.101 Sum_probs=68.6
Q ss_pred EEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEccCcH--hHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEE
Q 004977 129 EWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCV--EWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTL 206 (721)
Q Consensus 129 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~--e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~v 206 (721)
..+|+..+...+... ....++++++++...++-+. .++..+++++..|+.++.. +...++.+...+++.++..+
T Consensus 215 v~~s~~~l~~~~~~~---~~~~~~~~~~~~l~~~p~~h~~g~~~~~~~~l~~G~~~~~~-~~~~~~~~~~~l~~~~vt~~ 290 (547)
T PRK13295 215 VMHTANTLMANIVPY---AERLGLGADDVILMASPMAHQTGFMYGLMMPVMLGATAVLQ-DIWDPARAAELIRTEGVTFT 290 (547)
T ss_pred EEeccHHHHHHHHHH---HHHhCCCCCCeEEEecCchhhhhHHHHHHHHHHcCCeEEeC-CCCCHHHHHHHHHHcCCcEE
Confidence 367888776555443 34457889999988887653 3456678888999987765 46778999999999999998
Q ss_pred EECccchhHHHhhh----hcCCCccEEEE
Q 004977 207 ICDSKQLKKLSAVS----SSLKTIKNVIY 231 (721)
Q Consensus 207 i~~~~~~~~~~~~~----~~~~~~~~ii~ 231 (721)
+........+.... ..++.++.++.
T Consensus 291 ~~~p~~~~~l~~~~~~~~~~~~~l~~~~~ 319 (547)
T PRK13295 291 MASTPFLTDLTRAVKESGRPVSSLRTFLC 319 (547)
T ss_pred EecHHHHHHHHhcccccCCCcccceEEEE
Confidence 88777655444322 22345555554
No 162
>PRK06188 acyl-CoA synthetase; Validated
Probab=42.40 E-value=3.2e+02 Score=30.46 Aligned_cols=99 Identities=14% Similarity=0.132 Sum_probs=70.7
Q ss_pred EEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEE
Q 004977 129 EWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLIC 208 (721)
Q Consensus 129 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~ 208 (721)
..+|+..+...+.. .....++..+|++...++-+..+...+++.+..|+..+..+ ...++.+...++..++.+++.
T Consensus 186 v~~s~~~l~~~~~~---~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~ 261 (524)
T PRK06188 186 VMGTHRSIATMAQI---QLAEWEWPADPRFLMCTPLSHAGGAFFLPTLLRGGTVIVLA-KFDPAEVLRAIEEQRITATFL 261 (524)
T ss_pred eeeehHHHHHHHHH---HHhhcCCCcCcEEEEecCchhhhhHHHHHHHHcCCEEEEcC-CCCHHHHHHHHHHhCCEEEEe
Confidence 46788887765543 33445788999999888887666666778888898888775 466889999999999999999
Q ss_pred CccchhHHHhhh----hcCCCccEEEE
Q 004977 209 DSKQLKKLSAVS----SSLKTIKNVIY 231 (721)
Q Consensus 209 ~~~~~~~~~~~~----~~~~~~~~ii~ 231 (721)
.+.....+.... ..++.++.++.
T Consensus 262 ~P~~l~~l~~~~~~~~~~l~~lr~~~~ 288 (524)
T PRK06188 262 VPTMIYALLDHPDLRTRDLSSLETVYY 288 (524)
T ss_pred hHHHHHHHHhCcCccCCCCcceeEEEE
Confidence 887765544322 12345555544
No 163
>PLN03052 acetate--CoA ligase; Provisional
Probab=41.89 E-value=2e+02 Score=33.96 Aligned_cols=99 Identities=10% Similarity=-0.083 Sum_probs=63.5
Q ss_pred EeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEccCcHh-HHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEE
Q 004977 130 WQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVE-WFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLIC 208 (721)
Q Consensus 130 ~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e-~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~ 208 (721)
.+|.+.+...+ .......+++++|++....+-+.. +...+++.+..|+..+..+.......+..++++.+++++.+
T Consensus 375 v~sh~~~l~~~---~~~~~~~~l~~~d~~~~~~~l~w~~g~~~v~~~L~~Gat~vl~~g~p~~~~~~~~i~~~~vT~l~~ 451 (728)
T PLN03052 375 PWTQLTPLRAA---ADAWAHLDIRKGDIVCWPTNLGWMMGPWLVYASLLNGATLALYNGSPLGRGFAKFVQDAKVTMLGT 451 (728)
T ss_pred EECchHHHHHH---HHHHHhcCCCCCcEEEECCCcHHHhHHHHHHHHHHhCCEEEEeCCCCCCChHHHHHHHHCCCEEEE
Confidence 45666543332 222233688999988766655432 23456688999999987764433456889999999999999
Q ss_pred CccchhHHHhhh----hcCCCccEEEE
Q 004977 209 DSKQLKKLSAVS----SSLKTIKNVIY 231 (721)
Q Consensus 209 ~~~~~~~~~~~~----~~~~~~~~ii~ 231 (721)
.+.....+.... ..++.++.++.
T Consensus 452 ~Pt~l~~l~~~~~~~~~dlssLr~i~s 478 (728)
T PLN03052 452 VPSIVKTWKNTNCMAGLDWSSIRCFGS 478 (728)
T ss_pred CHHHHHHHHhcCCcccCChhheeEEEe
Confidence 988776654431 12345555544
No 164
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=41.43 E-value=1.2e+02 Score=32.23 Aligned_cols=77 Identities=6% Similarity=0.113 Sum_probs=55.7
Q ss_pred HHHHHHHHhCCCCCCCEEEEEccCcHhHHHHHHHHHhcCCEEEEecCC-----CCHHHHHHHHHhcCceEEEECc-----
Q 004977 141 CSFASGLVNFGHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSS-----LGEDALIHSLNETQVTTLICDS----- 210 (721)
Q Consensus 141 ~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~-----~~~~~l~~~l~~~~~~~vi~~~----- 210 (721)
..+.-.|+.+|+++||-|.+ .+.-|+.+.=++...|+.+|.+|-+ ..++.++..|..- .+.||.-.
T Consensus 60 ~AL~laL~al~ig~GDeVI~---ps~TfvATan~i~~~Ga~PVFvDid~~T~nid~~~ie~aIt~~-tKAIipVhl~G~~ 135 (374)
T COG0399 60 AALHLALLALAIGPGDEVIV---PSFTFVATANAVLLVGAKPVFVDIDPDTLNIDPDLIEAAITPR-TKAIIPVHLAGQP 135 (374)
T ss_pred HHHHHHHHhcCCCCCCEEEe---cCCchHHHHHHHHHcCCeEEEEecCCcccCCCHHHHHHHcccC-CeEEEEehhccCC
Confidence 45666777788999996655 4567899999999999999999654 5788899888874 55555532
Q ss_pred cchhHHHhhhh
Q 004977 211 KQLKKLSAVSS 221 (721)
Q Consensus 211 ~~~~~~~~~~~ 221 (721)
...+.+.++.+
T Consensus 136 ~dm~~i~~la~ 146 (374)
T COG0399 136 CDMDAIMALAK 146 (374)
T ss_pred CCHHHHHHHHH
Confidence 23455555543
No 165
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=41.31 E-value=3.7e+02 Score=31.60 Aligned_cols=100 Identities=9% Similarity=0.014 Sum_probs=66.9
Q ss_pred EEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEccCc--HhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEE
Q 004977 129 EWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETC--VEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTL 206 (721)
Q Consensus 129 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~--~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~v 206 (721)
..+|++.+...+..+.. ..++.++|++...+|-. ..+...+++.+..|+..+..........+...+++.++.++
T Consensus 383 v~~sh~~l~~~~~~~~~---~~~~~~~d~~l~~~Pl~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~vt~~ 459 (718)
T PRK08043 383 VVHSHKSLLANVEQIKT---IADFTPNDRFMSALPLFHSFGLTVGLFTPLLTGAEVFLYPSPLHYRIVPELVYDRNCTVL 459 (718)
T ss_pred EEEcHHHHHHHHHHHHH---hhCCCccCeEEEcCcchhhhhhHHHHHHHHHcCCEEEEeCCcccHHHHHHHHHhcCCeEE
Confidence 46899888776655543 34789999998887753 34455678888999988866544455667778888999988
Q ss_pred EECccchhHHHhhh--hcCCCccEEEE
Q 004977 207 ICDSKQLKKLSAVS--SSLKTIKNVIY 231 (721)
Q Consensus 207 i~~~~~~~~~~~~~--~~~~~~~~ii~ 231 (721)
...+.....+.... ..++.++.++.
T Consensus 460 ~~~p~~~~~l~~~~~~~~~~~lr~i~~ 486 (718)
T PRK08043 460 FGTSTFLGNYARFANPYDFARLRYVVA 486 (718)
T ss_pred EchHHHHHHhhhhcCcccccceEEEEE
Confidence 87766554433221 12345555554
No 166
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=40.63 E-value=76 Score=33.72 Aligned_cols=65 Identities=9% Similarity=0.112 Sum_probs=45.4
Q ss_pred HHHHHHHHhCCCCCCCEEEEEccCcHhHHHHHHHHHhcCCEEEEecCC-----CCHHHHHHHHHhcCceEEEEC
Q 004977 141 CSFASGLVNFGHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSS-----LGEDALIHSLNETQVTTLICD 209 (721)
Q Consensus 141 ~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~-----~~~~~l~~~l~~~~~~~vi~~ 209 (721)
..+-..|..+|+++||.|.+-. .-|....-|+..+|+.+|.+|-+ ..++.+...+..-. ++|+..
T Consensus 51 ~Al~~al~~l~~~~gdeVi~p~---~t~~~~~~ai~~~G~~pv~~Di~~~~~~id~~~~~~~i~~~t-~ai~~~ 120 (363)
T PF01041_consen 51 SALHLALRALGLGPGDEVIVPA---YTFPATASAILWAGAEPVFVDIDPETLNIDPEALEKAITPKT-KAILVV 120 (363)
T ss_dssp HHHHHHHHHTTGGTTSEEEEES---SS-THHHHHHHHTT-EEEEE-BETTTSSB-HHHHHHHHHTTE-EEEEEE
T ss_pred HHHHHHHHhcCCCcCceEecCC---CcchHHHHHHHHhccEEEEEeccCCcCCcCHHHHHHHhccCc-cEEEEe
Confidence 3466667779999999998864 44566778899999999988654 56788888887543 555543
No 167
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=40.53 E-value=2.3e+02 Score=31.06 Aligned_cols=85 Identities=15% Similarity=0.191 Sum_probs=67.2
Q ss_pred EEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEccC--cHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEE
Q 004977 129 EWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAET--CVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTL 206 (721)
Q Consensus 129 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n--~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~v 206 (721)
.++|--++...+..++..+ |+...+++.+-.|- +.-.++..+|++..|+..|.-.|.+.+...-..+.+-++..+
T Consensus 252 atLsH~~~~Nna~~vg~r~---g~~e~~~i~~~~Pl~H~~G~~~~~ma~l~~gat~Vfp~~~f~~k~alqai~~ekcT~l 328 (596)
T KOG1177|consen 252 ATLSHYNFLNNARAVGARA---GYNEKHRICIPNPLYHCFGCVLGVMAALMHGATIVFPAPSFDPKDALQAISNEKCTTL 328 (596)
T ss_pred eeeehhhhhhhHHHHHHHh---CcCcceEEEecCchHHHHHHHHHHHHHHHhCcEEEeeCCCCChHHHHHHHHhhceEEE
Confidence 4789888988888777654 66665565554442 456688899999999999999999999988899999999999
Q ss_pred EECccchhHH
Q 004977 207 ICDSKQLKKL 216 (721)
Q Consensus 207 i~~~~~~~~~ 216 (721)
+..+...-.+
T Consensus 329 ~gtPtM~~Dl 338 (596)
T KOG1177|consen 329 YGTPTMFVDL 338 (596)
T ss_pred ecChHHHHHH
Confidence 9998765433
No 168
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=39.58 E-value=1.1e+02 Score=32.85 Aligned_cols=63 Identities=3% Similarity=0.056 Sum_probs=41.5
Q ss_pred HHHHHHhCCCCCCCEEEEEccCcHhHHHHHHHHHhcCCEEEEecCC-----CCHHHHHHHHHhcCceEEEEC
Q 004977 143 FASGLVNFGHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSS-----LGEDALIHSLNETQVTTLICD 209 (721)
Q Consensus 143 lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~-----~~~~~l~~~l~~~~~~~vi~~ 209 (721)
+...+...++++||.|.+-.+ .+.....++...|+.+++++.+ ...+.+...+.. +.++|+..
T Consensus 59 L~~~l~al~~~pGd~Viv~~~---t~~~~~~~~~~~G~~~v~vd~d~~~~~~d~~~le~~i~~-~tk~Iip~ 126 (376)
T TIGR02379 59 LEMAALLLDIQPGDEVIMPSY---TFVSTANAFVLRGAKIVFVDIRPDTMNIDETLIESAITH-RTKAIVPV 126 (376)
T ss_pred HHHHHHHcCCCCcCEEEECCC---CcHHHHHHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCc-CceEEEEe
Confidence 333445568899999887554 4555566777889888877543 356677777654 56666543
No 169
>PRK05852 acyl-CoA synthetase; Validated
Probab=39.42 E-value=3.2e+02 Score=30.53 Aligned_cols=87 Identities=7% Similarity=-0.017 Sum_probs=63.9
Q ss_pred EEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEccCc--HhHHHHHHHHHhcCCEEEE-ecCCCCHHHHHHHHHhcCceE
Q 004977 129 EWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETC--VEWFIAFQGCFRQSITVVT-IYSSLGEDALIHSLNETQVTT 205 (721)
Q Consensus 129 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~--~e~~~~~lA~~~~G~~~vp-l~~~~~~~~l~~~l~~~~~~~ 205 (721)
..+|+..+...+..+...+ +++++|++..+++.. ..++..+++++..|...+. -.....+..+...+++.++..
T Consensus 194 v~~~~~~~~~~~~~~~~~~---~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~i~~~~~t~ 270 (534)
T PRK05852 194 VPWTHANIASSVRAIITGY---RLSPRDATVAVMPLYHGHGLIAALLATLASGGAVLLPARGRFSAHTFWDDIKAVGATW 270 (534)
T ss_pred EEecHHHHHHHHHHHHHHh---CCCCcceEEEecCcchhHHHHHHHHHHHhcCCeEEeCCCcCcCHHHHHHHHHHcCCcE
Confidence 4578888877666665444 688999888887754 3456677888888876553 234567788889999999999
Q ss_pred EEECccchhHHHh
Q 004977 206 LICDSKQLKKLSA 218 (721)
Q Consensus 206 vi~~~~~~~~~~~ 218 (721)
++..+.....+..
T Consensus 271 ~~~~P~~~~~l~~ 283 (534)
T PRK05852 271 YTAVPTIHQILLE 283 (534)
T ss_pred EEcChHHHHHHHh
Confidence 9999887766654
No 170
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=38.99 E-value=2.9e+02 Score=31.82 Aligned_cols=84 Identities=8% Similarity=0.028 Sum_probs=59.4
Q ss_pred CCCCCCCEEEEEccCcHh--HHHHHHHHHhcCCEEEEecC---CCCHHHHHHHHHhcCceEEEECccchhHHHhhh----
Q 004977 150 FGHNVDTRAAILAETCVE--WFIAFQGCFRQSITVVTIYS---SLGEDALIHSLNETQVTTLICDSKQLKKLSAVS---- 220 (721)
Q Consensus 150 ~Gv~~gd~V~i~~~n~~e--~~~~~lA~~~~G~~~vpl~~---~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~---- 220 (721)
.+++++|++...++-+.. ....+++.+..|+..+..+. ...+..+..++++.++.++.+.+.....+....
T Consensus 269 ~~~~~~d~~~~~~~~~~~~g~~~~~~~~L~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~ 348 (628)
T TIGR02316 269 FGIRAGQVMFSASDVGWVVGHSYIVYAPLLAGAATVLYEGLPTNPDPGVWWSIVERYGVRTMFSAPTAIRVLKKQDAAWL 348 (628)
T ss_pred cCCCCCcEEEEcCCCCeeehhhHHHHHHHhccceEEEeCCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcCCccc
Confidence 488999988777765432 23457888999998887652 235788899999999999999988776665432
Q ss_pred --hcCCCccEEEEec
Q 004977 221 --SSLKTIKNVIYFE 233 (721)
Q Consensus 221 --~~~~~~~~ii~~~ 233 (721)
..++.++.++..+
T Consensus 349 ~~~~l~~lr~~~~gG 363 (628)
T TIGR02316 349 RKHDLSSLHWLFLAG 363 (628)
T ss_pred ccCCccceeEEEEec
Confidence 1245666666543
No 171
>PF03744 BioW: 6-carboxyhexanoate--CoA ligase; InterPro: IPR005499 This family contains the enzyme 6-carboxyhexanoate--CoA ligase 6.2.1.14 from EC. This enzyme is involved in the first step of biotin synthesis, where it converts pimelate into pimeloyl-CoA []. The enzyme requires magnesium as a cofactor and forms a homodimer [].; GO: 0009102 biotin biosynthetic process
Probab=38.39 E-value=45 Score=32.69 Aligned_cols=41 Identities=17% Similarity=0.212 Sum_probs=24.6
Q ss_pred CCCCcceEEEccccccccccCCCcccccccccCCCCcceEeeCcEEEE---------c-cCCeEEEEecC
Q 004977 523 KPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVDERGMCWFYTGDIGQV---------Y-PDGCLEIIDRK 582 (721)
Q Consensus 523 ~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~~~g~gw~~TGDlg~~---------d-~dG~l~i~GR~ 582 (721)
.||..+|||++- ||+-| .||+.|.++||. + ..|++||+.+.
T Consensus 171 ~PgiiaELC~SD---------DP~Yt----------TGYVA~~~~GY~RI~~mK~~G~~~GGRvffv~~~ 221 (239)
T PF03744_consen 171 APGIIAELCWSD---------DPDYT----------TGYVASKKFGYHRITNMKEAGSPKGGRVFFVDGS 221 (239)
T ss_pred CCcceEEEEecC---------CCCCc----------eEEEEeCCcceEECccccccCCCCCCEEEEEeCC
Confidence 367899999863 22211 156666666555 1 25788887654
No 172
>PLN02654 acetate-CoA ligase
Probab=38.09 E-value=3.9e+02 Score=31.09 Aligned_cols=84 Identities=12% Similarity=0.014 Sum_probs=59.3
Q ss_pred CCCCCCCEEEEEccCcHh--HHHHHHHHHhcCCEEEEecC--C-CCHHHHHHHHHhcCceEEEECccchhHHHhhhh---
Q 004977 150 FGHNVDTRAAILAETCVE--WFIAFQGCFRQSITVVTIYS--S-LGEDALIHSLNETQVTTLICDSKQLKKLSAVSS--- 221 (721)
Q Consensus 150 ~Gv~~gd~V~i~~~n~~e--~~~~~lA~~~~G~~~vpl~~--~-~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~--- 221 (721)
.+++++|++...++-+.- ....+++.+..|+.++.... . ..++++..++++.++.++.+.+.....+.+...
T Consensus 312 ~~~~~~d~~~~~~~~~~~~g~~~~~~~~L~~G~tvvl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~ 391 (666)
T PLN02654 312 FDYKPTDVYWCTADCGWITGHSYVTYGPMLNGATVLVFEGAPNYPDSGRCWDIVDKYKVTIFYTAPTLVRSLMRDGDEYV 391 (666)
T ss_pred cCCCCCcEEEEcCCchhhhhhHHHHHHHHHcCceEEEECCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhhCcccc
Confidence 488999987776665432 23456788999999988754 2 357889999999999999999888766654321
Q ss_pred ---cCCCccEEEEec
Q 004977 222 ---SLKTIKNVIYFE 233 (721)
Q Consensus 222 ---~~~~~~~ii~~~ 233 (721)
.+..++.++..+
T Consensus 392 ~~~~l~~Lr~i~~~G 406 (666)
T PLN02654 392 TRHSRKSLRVLGSVG 406 (666)
T ss_pred ccCChhheeEEEEec
Confidence 234566555543
No 173
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=36.53 E-value=3.4e+02 Score=31.47 Aligned_cols=69 Identities=12% Similarity=0.006 Sum_probs=49.1
Q ss_pred hCCCCCCCEEEEEccCcHhHHHHHHHHHhcCCEEEEec--CCC-CHHHHHHHHHhcCceEEEECccchhHHH
Q 004977 149 NFGHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIY--SSL-GEDALIHSLNETQVTTLICDSKQLKKLS 217 (721)
Q Consensus 149 ~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~--~~~-~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 217 (721)
..+++++|++..+.+-+..+...+++.+..|+..+..+ +.+ .++.+..++++.+++++.+.......+.
T Consensus 300 ~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~G~t~vl~~g~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~ 371 (652)
T TIGR01217 300 HCDLGPGDRLFYYTTTGWMMWNWLVSGLATGATLVLYDGSPGFPATNVLWDIAERTGATLFGTSAKYVMACR 371 (652)
T ss_pred ccCCCCCcEEEEeCCcchhhhHHHHHHHhcCcEEEEECCCCCCCCchHHHHHHHHhCCeEEecCHHHHHHHH
Confidence 35889999988777766443333567889999888775 232 4678889999999998766655544443
No 174
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=36.41 E-value=1.3e+02 Score=31.98 Aligned_cols=60 Identities=7% Similarity=0.054 Sum_probs=40.6
Q ss_pred HHHhCCCCCCCEEEEEccCcHhHHHHHHHHHhcCCEEEEecCC-----CCHHHHHHHHHhcCceEEEEC
Q 004977 146 GLVNFGHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSS-----LGEDALIHSLNETQVTTLICD 209 (721)
Q Consensus 146 ~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~-----~~~~~l~~~l~~~~~~~vi~~ 209 (721)
.+...++++||.|.+-.+..+ ....++...|+.++.++.+ ...+++...+.. +.++|+..
T Consensus 62 ~l~~~~~~~Gd~Viv~~~t~~---~~~~~~~~~G~~~v~~d~d~~~~~~d~~~le~~i~~-~tk~i~~~ 126 (375)
T PRK11706 62 AALLLDIQPGDEVIMPSYTFV---STANAFVLRGAKIVFVDIRPDTMNIDETLIEAAITP-KTRAIVPV 126 (375)
T ss_pred HHHHhCCCCCCEEEECCCCcH---HHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhcCC-CCeEEEEe
Confidence 334457889999988665544 4455677889888877532 457888887765 56666543
No 175
>PLN02246 4-coumarate--CoA ligase
Probab=36.09 E-value=4.7e+02 Score=29.19 Aligned_cols=88 Identities=10% Similarity=0.010 Sum_probs=62.6
Q ss_pred EEeeHHHHHHHHHHHHHHH-HhCCCCCCCEEEEEccCcHh--HHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceE
Q 004977 129 EWQTYGEVFDRACSFASGL-VNFGHNVDTRAAILAETCVE--WFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTT 205 (721)
Q Consensus 129 ~~~Ty~el~~~v~~lA~~L-~~~Gv~~gd~V~i~~~n~~e--~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~ 205 (721)
..+|++.+...+....... ...++.++|++...++-... +...+++.+..|+.++... ....+++...++..++.+
T Consensus 197 v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~ 275 (537)
T PLN02246 197 VMLTHKGLVTSVAQQVDGENPNLYFHSDDVILCVLPMFHIYSLNSVLLCGLRVGAAILIMP-KFEIGALLELIQRHKVTI 275 (537)
T ss_pred EEEeHHHHHHHHHHHhhccccccCCCCCcEEEEeechHHHHHHHHHHHHHHhcCCEEEEeC-CCCHHHHHHHHHHhCceE
Confidence 3578888876554433322 23478899999887775432 2345678889999998885 467888999999999999
Q ss_pred EEECccchhHHH
Q 004977 206 LICDSKQLKKLS 217 (721)
Q Consensus 206 vi~~~~~~~~~~ 217 (721)
+...+.....+.
T Consensus 276 ~~~~p~~~~~l~ 287 (537)
T PLN02246 276 APFVPPIVLAIA 287 (537)
T ss_pred EEcchHHHHHHh
Confidence 988877655443
No 176
>PRK06164 acyl-CoA synthetase; Validated
Probab=35.80 E-value=4.7e+02 Score=29.18 Aligned_cols=86 Identities=13% Similarity=0.154 Sum_probs=64.9
Q ss_pred EEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEccCcH-hHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEE
Q 004977 129 EWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCV-EWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLI 207 (721)
Q Consensus 129 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~-e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi 207 (721)
..+|.+.+...+..++..+ ++.+++++..++|-+- -.+..+++++..|+..+.. +...+..+...|++.++.+++
T Consensus 199 v~~s~~~l~~~~~~~~~~~---~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~-~~~~~~~~~~~l~~~~~t~~~ 274 (540)
T PRK06164 199 VLHRQATLLRHARAIARAY---GYDPGAVLLAALPFCGVFGFSTLLGALAGGAPLVCE-PVFDAARTARALRRHRVTHTF 274 (540)
T ss_pred EEEehHHHHHHHHHHHHhc---CCCCCCEEEEcCCchhHHHHHHHHHHHhcCceEEec-CCCCHHHHHHHHHHhCCeeec
Confidence 4678888877666555554 6889999988887642 2234677888888887765 567788899999999999999
Q ss_pred ECccchhHHHh
Q 004977 208 CDSKQLKKLSA 218 (721)
Q Consensus 208 ~~~~~~~~~~~ 218 (721)
..+..+..+..
T Consensus 275 ~~p~~l~~l~~ 285 (540)
T PRK06164 275 GNDEMLRRILD 285 (540)
T ss_pred CCHHHHHHHHH
Confidence 98887765544
No 177
>PF09580 Spore_YhcN_YlaJ: Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ); InterPro: IPR019076 This entry contains YhcN and YlaJ, which are predicted lipoproteins that have been detected as spore proteins but not vegetative proteins in Bacillus subtilis. Both appear to be expressed under control of the RNA polymerase sigma-G factor. The YlaJ-like members of this family have a low-complexity, strongly acidic, 40-residue C-terminal domain.
Probab=35.44 E-value=1e+02 Score=28.75 Aligned_cols=33 Identities=12% Similarity=0.129 Sum_probs=25.6
Q ss_pred chHHHHHHhcCcccceEEEEecCCCceEEEEEEc
Q 004977 596 LGKVEAALISSDYVDNIMIHADPFHNYCVALVVP 629 (721)
Q Consensus 596 p~eIE~~l~~~p~V~~~~V~g~~~~~~~~a~vv~ 629 (721)
...|++.+.+.|+|.+|.|+-.. ...+||+-+.
T Consensus 77 a~~i~~~v~~~~~V~~A~vvv~~-~~a~Vav~~~ 109 (177)
T PF09580_consen 77 ADRIANRVKKVPGVEDATVVVTD-DNAYVAVDLD 109 (177)
T ss_pred HHHHHHHHhcCCCceEEEEEEEC-CEEEEEEEec
Confidence 46788999999999999998865 4456666555
No 178
>PLN02565 cysteine synthase
Probab=34.56 E-value=3e+02 Score=28.62 Aligned_cols=72 Identities=7% Similarity=-0.116 Sum_probs=53.1
Q ss_pred HHHHHHHHHhCCC-CCCCEEEEEccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECcc
Q 004977 140 ACSFASGLVNFGH-NVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSK 211 (721)
Q Consensus 140 v~~lA~~L~~~Gv-~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~ 211 (721)
+..+-..+.+.|. .+|....+....+---+..-++|..+|..++.+-|...+......++..+++++++++.
T Consensus 50 A~~~l~~~~~~g~~~~g~~~vv~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~~ 122 (322)
T PLN02565 50 GYSMITDAEEKGLIKPGESVLIEPTSGNTGIGLAFMAAAKGYKLIITMPASMSLERRIILLAFGAELVLTDPA 122 (322)
T ss_pred HHHHHHHHHHcCCCCCCCcEEEEECCChHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHHHHHcCCEEEEeCCC
Confidence 3334444455664 78866556566666666677788889998888878778888889999999999999864
No 179
>PRK08316 acyl-CoA synthetase; Validated
Probab=34.05 E-value=2.5e+02 Score=31.16 Aligned_cols=85 Identities=9% Similarity=0.038 Sum_probs=63.1
Q ss_pred EEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEccCcH--hHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEE
Q 004977 129 EWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCV--EWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTL 206 (721)
Q Consensus 129 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~--e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~v 206 (721)
..+|++.+...+ +......+++++|++...++-.. .+...+++++..|+..++.. ...++.+...+++.++.++
T Consensus 189 v~~s~~~l~~~~---~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~~~~~~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~ 264 (523)
T PRK08316 189 AMLTHRALIAEY---VSCIVAGDMSADDIPLHALPLYHCAQLDVFLGPYLYVGATNVILD-APDPELILRTIEAERITSF 264 (523)
T ss_pred EEEecHHHHHHH---HHHHHHhCCCCCceEEEccCCchhhhHHHHHHHHHhcCceEEEec-CCCHHHHHHHHHHhCCeEE
Confidence 468888876553 33445568999999988877543 33445677888999998874 4578899999999999999
Q ss_pred EECccchhHHH
Q 004977 207 ICDSKQLKKLS 217 (721)
Q Consensus 207 i~~~~~~~~~~ 217 (721)
++.+.....+.
T Consensus 265 ~~~P~~~~~l~ 275 (523)
T PRK08316 265 FAPPTVWISLL 275 (523)
T ss_pred EeCHHHHHHHH
Confidence 99887765443
No 180
>PRK07470 acyl-CoA synthetase; Validated
Probab=33.98 E-value=6.2e+02 Score=28.12 Aligned_cols=102 Identities=16% Similarity=0.112 Sum_probs=64.0
Q ss_pred EEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEccCcHhHHHHHHHHHhcCCEEEEe-cCCCCHHHHHHHHHhcCceEEE
Q 004977 129 EWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTI-YSSLGEDALIHSLNETQVTTLI 207 (721)
Q Consensus 129 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl-~~~~~~~~l~~~l~~~~~~~vi 207 (721)
..+|++.+...+......+. .+..++|++..+++-+..+-...+..+..|+..+.+ ....+++.+...+++.++.+++
T Consensus 181 v~~s~~~l~~~~~~~~~~~~-~~~~~~d~~l~~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~t~~~ 259 (528)
T PRK07470 181 AVLTHGQMAFVITNHLADLM-PGTTEQDASLVVAPLSHGAGIHQLCQVARGAATVLLPSERFDPAEVWALVERHRVTNLF 259 (528)
T ss_pred EEEehhhHHHHHHHHHHHhc-cCCCcccEEEEeccchhHHHHHHHHHHhcCceEEEecccCcCHHHHHHHHHhcCCeEEe
Confidence 46788887544332222111 267888999888887654433333344555555444 3467889999999999999999
Q ss_pred ECccchhHHHhhhh----cCCCccEEEE
Q 004977 208 CDSKQLKKLSAVSS----SLKTIKNVIY 231 (721)
Q Consensus 208 ~~~~~~~~~~~~~~----~~~~~~~ii~ 231 (721)
..+.....+..... ..+.++.++.
T Consensus 260 ~~P~~~~~l~~~~~~~~~~~~~lr~~~~ 287 (528)
T PRK07470 260 TVPTILKMLVEHPAVDRYDHSSLRYVIY 287 (528)
T ss_pred chHHHHHHHHhCcCcCCCCCcceEEEEE
Confidence 99888766543221 2345555544
No 181
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=33.13 E-value=3.2e+02 Score=30.24 Aligned_cols=85 Identities=16% Similarity=-0.002 Sum_probs=63.0
Q ss_pred EEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEccCcHh--HHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEE
Q 004977 129 EWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVE--WFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTL 206 (721)
Q Consensus 129 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e--~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~v 206 (721)
..+|++.+...+.... ....+++++|++...++-... +...+++.+..|+..+..+....++.+...|++.++.++
T Consensus 179 v~~s~~~~~~~~~~~~--~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~~ 256 (508)
T TIGR02262 179 VVHTHSNPYWTAELYA--RNTLGIREDDVVFSAAKLFFAYGLGNALTFPMSVGATTVLMGERPTPDAVFDRLRRHQPTIF 256 (508)
T ss_pred EEEechhHHHHHHHHh--HHhcCCCCCCEEEEcCchHHHHHHHHHHHHHHHcCceEEEeCCCCCHHHHHHHHHHHCCcEE
Confidence 4678888876554322 234489999998887776543 344567778899988887777788999999999999999
Q ss_pred EECccchhH
Q 004977 207 ICDSKQLKK 215 (721)
Q Consensus 207 i~~~~~~~~ 215 (721)
+..+.....
T Consensus 257 ~~~P~~~~~ 265 (508)
T TIGR02262 257 YGVPTLYAA 265 (508)
T ss_pred ecchHHHHH
Confidence 998875543
No 182
>cd01445 TST_Repeats Thiosulfate sulfurtransferases (TST) contain 2 copies of the Rhodanese Homology Domain. Only the second repeat contains the catalytically active Cys residue. The role of the 1st repeat is uncertain, but believed to be involved in protein interaction. This CD aligns the 1st and 2nd repeats.
Probab=32.93 E-value=1.2e+02 Score=27.02 Aligned_cols=45 Identities=13% Similarity=-0.026 Sum_probs=34.9
Q ss_pred HHHHHHHHhCCCCCCCEEEEEccC---cHhHHHHHHHHHhcCCEEEEe
Q 004977 141 CSFASGLVNFGHNVDTRAAILAET---CVEWFIAFQGCFRQSITVVTI 185 (721)
Q Consensus 141 ~~lA~~L~~~Gv~~gd~V~i~~~n---~~e~~~~~lA~~~~G~~~vpl 185 (721)
..++..|.+.|+.+++.|.+++.. +.....+++.+-.+|..-|-|
T Consensus 81 ~~~~~~~~~~GI~~~~~vVvY~~~~~~g~~A~r~~~~l~~~G~~~v~i 128 (138)
T cd01445 81 AEFAAMFEAKGIDLDKHLIATDGDDLGGFTACHIALAARLCGHPDVAI 128 (138)
T ss_pred HHHHHHHHHcCCCCCCeEEEECCCCCcchHHHHHHHHHHHcCCCCeEE
Confidence 467788889999999999999975 566666777788888664433
No 183
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=32.40 E-value=3.1e+02 Score=28.44 Aligned_cols=77 Identities=9% Similarity=0.033 Sum_probs=58.1
Q ss_pred HHHhCCCCCCCEEEEEccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccchhHHHhhhhcCCC
Q 004977 146 GLVNFGHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKT 225 (721)
Q Consensus 146 ~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~ 225 (721)
.|.+.|++||.+|+|..--+.-.+...+|.+. |.-++.++.... .-+..++..++...+...+..+....+.+.+..
T Consensus 173 pLk~~g~~pG~~vgI~GlGGLGh~aVq~AKAM-G~rV~vis~~~~--kkeea~~~LGAd~fv~~~~d~d~~~~~~~~~dg 249 (360)
T KOG0023|consen 173 PLKRSGLGPGKWVGIVGLGGLGHMAVQYAKAM-GMRVTVISTSSK--KKEEAIKSLGADVFVDSTEDPDIMKAIMKTTDG 249 (360)
T ss_pred hhHHcCCCCCcEEEEecCcccchHHHHHHHHh-CcEEEEEeCCch--hHHHHHHhcCcceeEEecCCHHHHHHHHHhhcC
Confidence 56778999999999999999999988888765 666777766542 334568888999988877666666666555443
No 184
>PF00818 Ice_nucleation: Ice nucleation protein repeat; InterPro: IPR000258 Certain Gram-negative bacteria express proteins that enable them to promote nucleation of ice at relatively high temperatures (above -5C) [, ]. These proteins are localised at the outer membrane surface and can cause frost damage to many plants. The primary structure of the proteins contains a highly repetitive domain that dominates the sequence. The domain comprises a number of 48-residue repeats, which themselves contain 3 blocks of 16 residues, the first 8 of which are identical. It is thought that the repetitive domain may be responsible for aligning water molecules in the seed crystal. [.........48.residues.repeated.domain..........] / / | | \ \ AGYGSTxTagxxssli AGYGSTxTagxxsxlt AGYGSTxTaqxxsxlt [16.residues...] [16.residues...] [16.residues...] ; GO: 0009279 cell outer membrane
Probab=32.10 E-value=20 Score=18.75 Aligned_cols=10 Identities=40% Similarity=0.657 Sum_probs=7.4
Q ss_pred cccccccccc
Q 004977 476 AYGLTETCAG 485 (721)
Q Consensus 476 ~YG~TE~~~~ 485 (721)
+||+|++...
T Consensus 1 GYGSTqTA~~ 10 (16)
T PF00818_consen 1 GYGSTQTAGE 10 (16)
T ss_pred CCCcccccCC
Confidence 5899987643
No 185
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=31.75 E-value=6.8e+02 Score=27.82 Aligned_cols=99 Identities=11% Similarity=-0.011 Sum_probs=67.3
Q ss_pred EEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEccCcHhHHH---HHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceE
Q 004977 129 EWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVEWFI---AFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTT 205 (721)
Q Consensus 129 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~---~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~ 205 (721)
..+|...+...+.... ...++.++|++...+|....+-. ..++++..|+..+.. +...+..+...+++.++.+
T Consensus 201 v~~s~~~~~~~~~~~~---~~~~~~~~d~~l~~~P~~h~~~~~~~~~~~~l~~G~~~v~~-~~~~~~~~~~~i~~~~~t~ 276 (527)
T TIGR02275 201 IPRTHNDYYYSVRRSV---EICWLTQQTRYLCALPAAHNYPLSSPGALGVFYAGGCVVLA-PDPSPTDCFPLIERHKVTV 276 (527)
T ss_pred eeeehHHHHHHHHHHH---hhcCCCcCCEEEECCChHhhhhhhHHHHHHHHhcCCeEEEC-CCCCHHHHHHHHHHhCCeE
Confidence 4678888776555433 34578899999888876543322 367888889887664 4456788888999999999
Q ss_pred EEECccchhHHHhhh----hcCCCccEEEE
Q 004977 206 LICDSKQLKKLSAVS----SSLKTIKNVIY 231 (721)
Q Consensus 206 vi~~~~~~~~~~~~~----~~~~~~~~ii~ 231 (721)
+...+.....+.... ..++.++.++.
T Consensus 277 ~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~ 306 (527)
T TIGR02275 277 TALVPPAVALWMQAASKSRYDLSSLKLLQV 306 (527)
T ss_pred EEecHHHHHHHHhCccccCCCccceEEEEE
Confidence 999988765544322 22345555544
No 186
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=31.71 E-value=3.9e+02 Score=29.27 Aligned_cols=85 Identities=20% Similarity=0.143 Sum_probs=62.4
Q ss_pred EEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEccCcHh-HHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEE
Q 004977 129 EWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVE-WFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLI 207 (721)
Q Consensus 129 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e-~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi 207 (721)
..+|++.+...+.... ...+++++|++...+|-... .+..+++.+..|+..+..+ ...+.++...+++.++.++.
T Consensus 159 v~~s~~~~~~~~~~~~---~~~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~ 234 (483)
T PRK03640 159 VIQTYGNHWWSAVGSA---LNLGLTEDDCWLAAVPIFHISGLSILMRSVIYGMRVVLVE-KFDAEKINKLLQTGGVTIIS 234 (483)
T ss_pred EEEecHHHHHHHHHHH---HhcCCCcCcEEEEecCHHHHHHHHHHHHHHhcCCEEEecC-CCCHHHHHHHHHHhCCcEEE
Confidence 4678887765443332 23588999999998875322 2334577778898877664 57889999999999999999
Q ss_pred ECccchhHHH
Q 004977 208 CDSKQLKKLS 217 (721)
Q Consensus 208 ~~~~~~~~~~ 217 (721)
..+.....+.
T Consensus 235 ~~P~~~~~l~ 244 (483)
T PRK03640 235 VVSTMLQRLL 244 (483)
T ss_pred eHHHHHHHHH
Confidence 9988776554
No 187
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=31.31 E-value=2.4e+02 Score=28.60 Aligned_cols=90 Identities=17% Similarity=0.153 Sum_probs=56.9
Q ss_pred HHHHHHHHHHHhCCCCCCCEEEEEccCcHhHHHHHHHHHhcCCEEEEecCCC----CHHHHHHHHHhcCceEEEECccch
Q 004977 138 DRACSFASGLVNFGHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSSL----GEDALIHSLNETQVTTLICDSKQL 213 (721)
Q Consensus 138 ~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~----~~~~l~~~l~~~~~~~vi~~~~~~ 213 (721)
.|+..+|..|++.| ..|..++.+....... .+...|..+..++... ..+++..+|++.+++++|+|.-..
T Consensus 18 ~Rcl~LA~~l~~~g----~~v~f~~~~~~~~~~~--~i~~~g~~v~~~~~~~~~~~d~~~~~~~l~~~~~d~vV~D~y~~ 91 (279)
T TIGR03590 18 MRCLTLARALHAQG----AEVAFACKPLPGDLID--LLLSAGFPVYELPDESSRYDDALELINLLEEEKFDILIVDHYGL 91 (279)
T ss_pred HHHHHHHHHHHHCC----CEEEEEeCCCCHHHHH--HHHHcCCeEEEecCCCchhhhHHHHHHHHHhcCCCEEEEcCCCC
Confidence 57888999998765 4677776665554433 3467888777775433 245788999999999999997432
Q ss_pred -hHHHhhhhcCCCccEEEEecCC
Q 004977 214 -KKLSAVSSSLKTIKNVIYFEND 235 (721)
Q Consensus 214 -~~~~~~~~~~~~~~~ii~~~~~ 235 (721)
.......+. ....++++++.
T Consensus 92 ~~~~~~~~k~--~~~~l~~iDD~ 112 (279)
T TIGR03590 92 DADWEKLIKE--FGRKILVIDDL 112 (279)
T ss_pred CHHHHHHHHH--hCCeEEEEecC
Confidence 222222221 23355666654
No 188
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=30.93 E-value=6.9e+02 Score=26.74 Aligned_cols=126 Identities=7% Similarity=0.054 Sum_probs=74.7
Q ss_pred CCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCC--CCEEE
Q 004977 82 STMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNV--DTRAA 159 (721)
Q Consensus 82 ~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~--gd~V~ 159 (721)
+++.+.++-..+.+-+..+++... .|.+ .......+|++.+...+..++..+ |+.. .|++.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~i~~T----------SGTT----G~PKgV~~sh~~l~~~~~~~~~~~---~~~~~~~dr~l 142 (386)
T TIGR02372 80 RRIGEWVDLIAHHSTPTARFTFAT----------SGST----GTPKPVTHSWAALLSEAQAIAKIL---GERPPPVRRVI 142 (386)
T ss_pred ccHHHHHHHHHhcCCCCceEEEEC----------CCCC----CCCceeEeeHHHHHHHHHHHHHHh---CcCCCCCCeEE
Confidence 567777776666665556665531 3330 012234679999988888777765 4433 35677
Q ss_pred EEccCcH--hHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccchhHHHhhhhcCCCcc
Q 004977 160 ILAETCV--EWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIK 227 (721)
Q Consensus 160 i~~~n~~--e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~ 227 (721)
.++|-.. -++..++..+..|+.++... ..++..+...++.. ++++..+.....+.+....+++++
T Consensus 143 ~~~Pl~h~~g~~~~~l~~l~~G~~vv~~~-~~~~~~~l~~i~~~--t~~~~~P~~l~~l~~~~~~l~slr 209 (386)
T TIGR02372 143 SCVPAHHLYGFLFSCLLPSRRGLEAKQLA-AAPASGIMRHARPG--DLIVGTPFIWEQLADLDYRLPGVV 209 (386)
T ss_pred EeCCcHHHHHHHHHHHHHHHCCCeEEecC-CCChHHHHHhhccC--CEEEECcHHHHHHHhhCcCCCcce
Confidence 7776552 33455667778898887764 45555555444432 577777777766654333344444
No 189
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=30.84 E-value=7.2e+02 Score=27.73 Aligned_cols=99 Identities=11% Similarity=0.084 Sum_probs=66.8
Q ss_pred EEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEccCcH--hHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEE
Q 004977 129 EWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCV--EWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTL 206 (721)
Q Consensus 129 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~--e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~v 206 (721)
..+|++.+...+.... ...+++.+|++...++-.. .++..++..+..|+..+. .+.+.++.+...+++.++.++
T Consensus 213 v~~s~~~~~~~~~~~~---~~~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~g~~~~~-~~~~~~~~~~~~l~~~~vt~~ 288 (538)
T TIGR03208 213 VMHTANTLFSNIHPYA---ERLELGGGDVILMASPMAHQTGFMYGLMMPLILNATAVL-QDIWNPARAAELIRETGVTFT 288 (538)
T ss_pred EEeehHHHHHHHHHHH---hhcCCCCCCeEEEeCCchhHHHHHHHHHHHHHcCCEEEe-cCccCHHHHHHHHHHhCCeEE
Confidence 3578877765544433 3347888999988887653 345556777778886664 456788999999999999999
Q ss_pred EECccchhHHHhhh----hcCCCccEEEE
Q 004977 207 ICDSKQLKKLSAVS----SSLKTIKNVIY 231 (721)
Q Consensus 207 i~~~~~~~~~~~~~----~~~~~~~~ii~ 231 (721)
...+.....+.... ..++.++.++.
T Consensus 289 ~~~p~~~~~l~~~~~~~~~~~~~l~~~~~ 317 (538)
T TIGR03208 289 MASTPFLTDLCRAVKESGAPVPSLFTFLC 317 (538)
T ss_pred ecCHHHHHHHHhchhccCCCCCcceEEEE
Confidence 88877665443221 23455665554
No 190
>PF01037 AsnC_trans_reg: AsnC family; InterPro: IPR019887 The many bacterial transcription regulation proteins which bind DNA through a 'helix-turn-helix' motif can be classified into subfamilies on the basis of sequence similarities. One such family is the AsnC/Lrp subfamily []. The Lrp family of transcriptional regulators appears to be widely distributed among bacteria and archaea, as an important regulatory system of the amino acid metabolism and related processes []. Members of the Lrp family are small DNA-binding proteins with molecular masses of around 15 kDa. Target promoters often contain a number of binding sites that typically lack obvious inverted repeat elements, and to which binding is usually co-operative. LrpA from Pyrococcus furiosus is the first Lrp-like protein to date of which a three-dimensional structure has been solved. In the crystal structure LrpA forms an octamer consisting of four dimers. The structure revealed that the N-terminal part of the protein consists of a helix-turn-helix (HTH) domain, a fold generally involved in DNA binding. The C terminus of Lrp-like proteins has a beta-fold, where the two alpha-helices are located at one side of the four-stranded antiparallel beta-sheet. LrpA forms a homodimer mainly through interactions between the beta-strands of this C-terminal domain, and an octamer through further interactions between the second alpha-helix and fourth beta-strand of the motif. Hence, the C-terminal domain of Lrp-like proteins appears to be involved in ligand-response and activation [].; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0043565 sequence-specific DNA binding, 0006355 regulation of transcription, DNA-dependent, 0005622 intracellular; PDB: 2DJW_F 2GQQ_A 2ZNY_E 2ZNZ_G 1RI7_A 2CYY_A 2E1C_A 2CG4_B 2DBB_B 1I1G_A ....
Probab=30.76 E-value=1.9e+02 Score=21.89 Aligned_cols=46 Identities=13% Similarity=0.086 Sum_probs=31.5
Q ss_pred EEcCCeeeeechHHHHHHhcCcccceEEEEecCCCceEEEEEEcChHH
Q 004977 586 VKLQHGEYISLGKVEAALISSDYVDNIMIHADPFHNYCVALVVPSHKA 633 (721)
Q Consensus 586 ik~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~~~~~a~vv~~~~~ 633 (721)
|++..|. -...++.+.|.++|.|.+|..+.-. ..+++-+.+++.+.
T Consensus 3 V~~~~~~-~~~~~~~~~l~~~p~V~~~~~vtG~-~d~~~~v~~~d~~~ 48 (74)
T PF01037_consen 3 VKVEPGH-DAYDEFAEALAEIPEVVECYSVTGE-YDLILKVRARDMEE 48 (74)
T ss_dssp EEESTTG-THHHHHHHHHHTSTTEEEEEEESSS-SSEEEEEEESSHHH
T ss_pred EEEcCCC-chHHHHHHHHHcCCCEEEEEEEeCC-CCEEEEEEECCHHH
Confidence 3444444 4567899999999999998887643 45555566666543
No 191
>PRK07529 AMP-binding domain protein; Validated
Probab=30.67 E-value=7.6e+02 Score=28.39 Aligned_cols=100 Identities=10% Similarity=0.001 Sum_probs=67.5
Q ss_pred EEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEccCc--HhHHHHHHHHHhcCCEEEEecCC-CC----HHHHHHHHHhc
Q 004977 129 EWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETC--VEWFIAFQGCFRQSITVVTIYSS-LG----EDALIHSLNET 201 (721)
Q Consensus 129 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~--~e~~~~~lA~~~~G~~~vpl~~~-~~----~~~l~~~l~~~ 201 (721)
..+|++.+...+..++. ..++.++|++...+|-. ...+..+++.+..|+.++...+. +. .+.+..++++.
T Consensus 231 v~~sh~~l~~~~~~~~~---~~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~~~~~~i~~~ 307 (632)
T PRK07529 231 AQHTHGNEVANAWLGAL---LLGLGPGDTVFCGLPLFHVNALLVTGLAPLARGAHVVLATPQGYRGPGVIANFWKIVERY 307 (632)
T ss_pred EEEcHHHHHHHHHHHHH---hcCCCCCCEEEEecCchhhhHHHHHHHHHHHCCCEEEecCccccCcchHHHHHHHHHHHh
Confidence 46788888766554443 34678999988877753 23455678888999888776543 21 24677889999
Q ss_pred CceEEEECccchhHHHhhh---hcCCCccEEEE
Q 004977 202 QVTTLICDSKQLKKLSAVS---SSLKTIKNVIY 231 (721)
Q Consensus 202 ~~~~vi~~~~~~~~~~~~~---~~~~~~~~ii~ 231 (721)
++..++..+.....+.... ..+++++.+++
T Consensus 308 ~vt~~~~~P~~~~~l~~~~~~~~~~~slr~v~~ 340 (632)
T PRK07529 308 RINFLSGVPTVYAALLQVPVDGHDISSLRYALC 340 (632)
T ss_pred CCeEEEeHHHHHHHHHhCcccCCCccceEEEEE
Confidence 9999999887766554432 13456666555
No 192
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=29.31 E-value=6.5e+02 Score=31.39 Aligned_cols=100 Identities=9% Similarity=0.008 Sum_probs=69.7
Q ss_pred EEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEccCc--HhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEE
Q 004977 129 EWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETC--VEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTL 206 (721)
Q Consensus 129 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~--~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~v 206 (721)
..+|.+.+...+..+.. ..++.++|++...+|-. ..+....++.+..|+..+.......++.+...+++.+++++
T Consensus 800 v~~s~~~~~~~~~~~~~---~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~g~~~v~~~~~~~~~~~~~~i~~~~~t~~ 876 (1146)
T PRK08633 800 VMLSHHNILSNIEQISD---VFNLRNDDVILSSLPFFHSFGLTVTLWLPLLEGIKVVYHPDPTDALGIAKLVAKHRATIL 876 (1146)
T ss_pred EEechHHHHHHHHHHHH---hcCCCCCCEEEEcCcHHHHHhHHHHHHHHHHCCCEEEEeCCCCCHHHHHHHHHHcCCeEE
Confidence 46788888766655443 34678899887766643 33344467778889888877666788999999999999999
Q ss_pred EECccchhHHHhhh----hcCCCccEEEE
Q 004977 207 ICDSKQLKKLSAVS----SSLKTIKNVIY 231 (721)
Q Consensus 207 i~~~~~~~~~~~~~----~~~~~~~~ii~ 231 (721)
.+.+.....+.+.. ..++.++.++.
T Consensus 877 ~~~P~~~~~l~~~~~~~~~~~~~lr~~~~ 905 (1146)
T PRK08633 877 LGTPTFLRLYLRNKKLHPLMFASLRLVVA 905 (1146)
T ss_pred EecHHHHHHHHhccccCcccCCCeeeEEE
Confidence 99988776554321 23345555554
No 193
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=28.86 E-value=7e+02 Score=27.83 Aligned_cols=86 Identities=13% Similarity=0.001 Sum_probs=63.3
Q ss_pred EEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEccCcHhHH---HHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceE
Q 004977 129 EWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVEWF---IAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTT 205 (721)
Q Consensus 129 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~---~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~ 205 (721)
..+|.+.+...+..... ..++.++|++...+|-...+- ...++++..|+..+.. +...+......+++.++.+
T Consensus 200 V~~s~~~l~~~~~~~~~---~~~~~~~~~~l~~~p~~h~~~~~~~~~~~~l~~g~~~~~~-~~~~~~~~~~~l~~~~~t~ 275 (536)
T PRK10946 200 IPRTHNDYYYSVRRSVE---ICGFTPQTRYLCALPAAHNYPMSSPGALGVFLAGGTVVLA-PDPSATLCFPLIEKHQVNV 275 (536)
T ss_pred EEEehHHHHHHHHHHHH---hcCCCCCceEEEecCccccccchhhhHHHHhhcCcEEEEC-CCCCHHHHHHHHHHhCCcE
Confidence 46899988887665443 347889999988877654332 2468888999988765 4456777888999999999
Q ss_pred EEECccchhHHHh
Q 004977 206 LICDSKQLKKLSA 218 (721)
Q Consensus 206 vi~~~~~~~~~~~ 218 (721)
+...+.....+..
T Consensus 276 ~~~~p~~~~~l~~ 288 (536)
T PRK10946 276 TALVPPAVSLWLQ 288 (536)
T ss_pred EEeChHHHHHHHh
Confidence 9998877655543
No 194
>COG2236 Predicted phosphoribosyltransferases [General function prediction only]
Probab=28.44 E-value=1e+02 Score=29.29 Aligned_cols=33 Identities=18% Similarity=0.228 Sum_probs=29.4
Q ss_pred EEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEE
Q 004977 129 EWQTYGEVFDRACSFASGLVNFGHNVDTRAAIL 161 (721)
Q Consensus 129 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~ 161 (721)
..+||.++.+.+.++|..+.+.|.+|.-.|+|.
T Consensus 5 ~~vSw~~I~~~~~~lA~kI~~s~~~PDvIiaia 37 (192)
T COG2236 5 LYVSWEEIHRLCRALAEKIRASGFKPDVIVAIA 37 (192)
T ss_pred EEecHHHHHHHHHHHHHHHHHcCCCCCEEEEEc
Confidence 479999999999999999999999998666664
No 195
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=28.24 E-value=5.3e+02 Score=28.79 Aligned_cols=84 Identities=11% Similarity=-0.010 Sum_probs=62.1
Q ss_pred EEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEccCcH--hHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEE
Q 004977 129 EWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCV--EWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTL 206 (721)
Q Consensus 129 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~--e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~v 206 (721)
..+|++.+...+..... ..++.++|++...++-.. .++..+++++..|+.++..+ ...++.+...+++.++.++
T Consensus 208 v~~s~~~l~~~~~~~~~---~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~i~~~~-~~~~~~~~~~i~~~~~t~~ 283 (546)
T PRK08314 208 CMHTHRTVMANAVGSVL---WSNSTPESVVLAVLPLFHVTGMVHSMNAPIYAGATVVLMP-RWDREAAARLIERYRVTHW 283 (546)
T ss_pred EEEecHHHHHHHHHHHH---hhCCCCCceEEEEcCchHHHHHHHHHHHHHHcCCeEEecC-CCCHHHHHHHHHHhcCcee
Confidence 46889888776554433 346788999887776532 34556778899999888774 5678889999999999999
Q ss_pred EECccchhHH
Q 004977 207 ICDSKQLKKL 216 (721)
Q Consensus 207 i~~~~~~~~~ 216 (721)
...+.....+
T Consensus 284 ~~~p~~~~~l 293 (546)
T PRK08314 284 TNIPTMVVDF 293 (546)
T ss_pred cccHHHHHHH
Confidence 8888765443
No 196
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=28.14 E-value=2.7e+02 Score=29.63 Aligned_cols=65 Identities=14% Similarity=0.109 Sum_probs=43.5
Q ss_pred HHHHHHHHhCCCCCCCEEEEEccCcHhHHHHHHHHHhcCCEEEEecC-----CCCHHHHHHHHHh---cCceEEEE
Q 004977 141 CSFASGLVNFGHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYS-----SLGEDALIHSLNE---TQVTTLIC 208 (721)
Q Consensus 141 ~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~-----~~~~~~l~~~l~~---~~~~~vi~ 208 (721)
..+...+..+++++||.|.+-.+. +....-++...|+.++.++. ....+.+...+++ -+.++|+.
T Consensus 55 ~al~~~l~al~~~~Gd~Viv~~~~---~~~~~~~~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~t~~v~~ 127 (380)
T TIGR03588 55 SALHIACLALGVGPGDRVWTTPIT---FVATANCALYCGAKVDFVDIDPDTGNIDEDALEKKLAAAKGKLPKAIVP 127 (380)
T ss_pred HHHHHHHHHcCCCCCCEEEeCCcc---hHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHhhcccCCCceEEEE
Confidence 445555666688999998877654 34445667788988776644 2467888888873 35566653
No 197
>PRK13383 acyl-CoA synthetase; Provisional
Probab=27.95 E-value=4.6e+02 Score=29.09 Aligned_cols=86 Identities=10% Similarity=0.048 Sum_probs=59.4
Q ss_pred HHHHhCCCCCCCEEEEEccCcHh-HHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccchhHHHhhhh--
Q 004977 145 SGLVNFGHNVDTRAAILAETCVE-WFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSS-- 221 (721)
Q Consensus 145 ~~L~~~Gv~~gd~V~i~~~n~~e-~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~-- 221 (721)
..+...++.++|++...+|-... .....++.+..|+.++.. +....+.+...++..++..+.+.+.....+.....
T Consensus 207 ~~~~~~~~~~~d~~~~~~pl~h~~g~~~~~~~l~~G~~~~~~-~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~ 285 (516)
T PRK13383 207 TILDRTRLRTGSRISVAMPMFHGLGLGMLMLTIALGGTVLTH-RHFDAEAALAQASLHRADAFTAVPVVLARILELPPRV 285 (516)
T ss_pred hHHhhhccCCCCeEEEecCCcchhhHHHHHHHHhcCCEEEEC-CCCCHHHHHHHHHHhCCcEEEecHHHHHHHHhccccc
Confidence 34455688999999887764322 234456677889888765 45778888899999999999999887766544321
Q ss_pred ----cCCCccEEEE
Q 004977 222 ----SLKTIKNVIY 231 (721)
Q Consensus 222 ----~~~~~~~ii~ 231 (721)
..+.++.++.
T Consensus 286 ~~~~~~~~lr~i~~ 299 (516)
T PRK13383 286 RARNPLPQLRVVMS 299 (516)
T ss_pred cccCCCCceEEEEE
Confidence 2345665555
No 198
>PLN02556 cysteine synthase/L-3-cyanoalanine synthase
Probab=27.89 E-value=5.5e+02 Score=27.35 Aligned_cols=62 Identities=5% Similarity=-0.121 Sum_probs=47.0
Q ss_pred hCC-CCCCCEEEEEccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECc
Q 004977 149 NFG-HNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDS 210 (721)
Q Consensus 149 ~~G-v~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~ 210 (721)
+.| +++|....|....+---+...++|...|.-+..+-|...+.+-...++..++++++++.
T Consensus 103 ~~G~i~pG~~~vV~aSsGN~G~alA~~a~~~G~~~~ivvp~~~~~~k~~~lr~~GA~Vi~~~~ 165 (368)
T PLN02556 103 KKNLITPGKTTLIEPTSGNMGISLAFMAAMKGYKMILTMPSYTSLERRVTMRAFGAELVLTDP 165 (368)
T ss_pred HcCCcCCCCCEEEEeCCchHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECC
Confidence 444 67785545556666667777778899998887777766667778999999999999974
No 199
>TIGR01139 cysK cysteine synthase A. This model distinguishes cysteine synthase A (CysK) from cysteine synthase B (CysM). CysM differs in having a broader specificity that also allows the use of thiosulfate to produce cysteine thiosulfonate.
Probab=27.72 E-value=4.3e+02 Score=27.00 Aligned_cols=66 Identities=3% Similarity=-0.113 Sum_probs=46.4
Q ss_pred HHHhCC-CCCCCEEEEEccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccc
Q 004977 146 GLVNFG-HNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQ 212 (721)
Q Consensus 146 ~L~~~G-v~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~ 212 (721)
...+.| +.+|++| +....+-.-...-++|.+.|..+..+-|...+......++..++++++++...
T Consensus 47 ~a~~~g~~~~g~~v-v~aSsGN~g~alA~~a~~~Gl~~~i~vp~~~~~~k~~~~~~~GA~v~~~~~~~ 113 (298)
T TIGR01139 47 DAEKRGLLKPGKTI-VEPTSGNTGIALAMVAAARGYKLILTMPETMSIERRKLLKAYGAELVLTPGAE 113 (298)
T ss_pred HHHHcCCCCCCCEE-EEeCCChhHHHHHHHHHHcCCeEEEEeCCccCHHHHHHHHHcCCEEEEECCCC
Confidence 344556 4777777 45555555566666777899887777666555556788999999999998753
No 200
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=27.65 E-value=5.7e+02 Score=32.86 Aligned_cols=103 Identities=9% Similarity=-0.001 Sum_probs=70.8
Q ss_pred EEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEccCcHh-HHHHHHHHHhcCCEEEEecCC--CCHHHHHHHHHhcCceE
Q 004977 129 EWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVE-WFIAFQGCFRQSITVVTIYSS--LGEDALIHSLNETQVTT 205 (721)
Q Consensus 129 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e-~~~~~lA~~~~G~~~vpl~~~--~~~~~l~~~l~~~~~~~ 205 (721)
..+|.+.+...+..++. ..++.++|++..+++-+.+ .+..++.++..|+.++..... ..+..+...+++.++++
T Consensus 433 V~~sh~~l~~~~~~~~~---~~~~~~~d~~~~~~~~~~d~~~~~i~~~L~~G~~l~~~~~~~~~~~~~l~~~i~~~~vt~ 509 (1389)
T TIGR03443 433 VLGRHFSLAYYFPWMAK---RFGLSENDKFTMLSGIAHDPIQRDMFTPLFLGAQLLVPTADDIGTPGRLAEWMAKYGATV 509 (1389)
T ss_pred EEeccHHHHHHHHHHHH---hcCCCCCCEEEEecCceecchHHHHHHHHhCCCEEEEcChhhccCHHHHHHHHHHhCCeE
Confidence 36788877666544433 3478899998877765432 234567888899887765433 35678999999999999
Q ss_pred EEECccchhHHHhh-hhcCCCccEEEEecC
Q 004977 206 LICDSKQLKKLSAV-SSSLKTIKNVIYFEN 234 (721)
Q Consensus 206 vi~~~~~~~~~~~~-~~~~~~~~~ii~~~~ 234 (721)
+...+.....+... ...++.++.++..++
T Consensus 510 ~~~~Ps~~~~l~~~~~~~~~~lr~~~~gGe 539 (1389)
T TIGR03443 510 THLTPAMGQLLSAQATTPIPSLHHAFFVGD 539 (1389)
T ss_pred EEeCHHHHHHHHhcccccCCCccEEEEecc
Confidence 99988776655432 234667777776554
No 201
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=27.60 E-value=2.4e+02 Score=30.10 Aligned_cols=62 Identities=13% Similarity=0.186 Sum_probs=41.6
Q ss_pred HHHHHHHhCCCCCCCEEEEEccCcHhHHHHHHHHHhcCCEEEEecCC-----CCHHHHHHHHHhcCceEEE
Q 004977 142 SFASGLVNFGHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSS-----LGEDALIHSLNETQVTTLI 207 (721)
Q Consensus 142 ~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~-----~~~~~l~~~l~~~~~~~vi 207 (721)
.+...|..+++++||.|.+-.+. |.....++...|+.++.++.. ...+.+...+.. +.++|+
T Consensus 60 al~lal~al~~~~Gd~Viv~~~~---~~~~~~~~~~~G~~~v~vd~~~~~~~~d~~~l~~~i~~-~tkav~ 126 (379)
T PRK11658 60 GMHITLMALGIGPGDEVITPSLT---WVSTLNMIVLLGATPVMVDVDRDTLMVTPEAIEAAITP-RTKAII 126 (379)
T ss_pred HHHHHHHHcCCCCCCEEEECCCc---HHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhccc-CCeEEE
Confidence 44555666788999998775543 444455667889888877532 457788877754 566665
No 202
>PF09269 DUF1967: Domain of unknown function (DUF1967); InterPro: IPR015349 The Obg family comprises a group of ancient P-loop small G proteins (GTPases) belonging to the TRAFAC (for translation factors) class and can be subdivided into several distinct protein subfamilies []. OBG GTPases have been found in both prokaryotes and eukaryotes []. The structure of the OBG GTPase from Thermus thermophilus has been determined []. This entry represents a C-terminal domain found in certain OBG GTPases. This domain contains a four-stranded beta sheet and three alpha helices flanked by an additional beta strand. It is predominantly found in the bacterial GTP-binding protein Obg, and is functionally uncharacterised. ; GO: 0000166 nucleotide binding; PDB: 1UDX_A.
Probab=27.15 E-value=39 Score=26.08 Aligned_cols=30 Identities=10% Similarity=-0.056 Sum_probs=18.0
Q ss_pred eeHHHHHHHHHHHHHHHHhCCCCCCCEEEE
Q 004977 131 QTYGEVFDRACSFASGLVNFGHNVDTRAAI 160 (721)
Q Consensus 131 ~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i 160 (721)
+.|-+-.-+...+-..|++.|++.||.|-|
T Consensus 33 ~~rf~~~L~~~Gv~~~L~~~G~~~GD~V~I 62 (69)
T PF09269_consen 33 LRRFQRKLKKMGVEKALRKAGAKEGDTVRI 62 (69)
T ss_dssp HHHHHHHHHHTTHHHHHHTTT--TT-EEEE
T ss_pred HHHHHHHHHHCCHHHHHHHcCCCCCCEEEE
Confidence 334444444455667888899999999977
No 203
>PRK11761 cysM cysteine synthase B; Provisional
Probab=26.90 E-value=4.4e+02 Score=27.04 Aligned_cols=76 Identities=7% Similarity=-0.100 Sum_probs=51.9
Q ss_pred eHHHHHHHHHHHHHHHHhCC-CCCCCEEEEEccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECc
Q 004977 132 TYGEVFDRACSFASGLVNFG-HNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDS 210 (721)
Q Consensus 132 Ty~el~~~v~~lA~~L~~~G-v~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~ 210 (721)
||+. +-+..+...+.+.| +.+|+.|.. ...+---...-++|...|..+..+-|...+......++..++++++++.
T Consensus 41 S~K~--R~a~~~~~~a~~~g~~~~g~~vv~-aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~~~~ 117 (296)
T PRK11761 41 SVKD--RPALSMIVQAEKRGEIKPGDTLIE-ATSGNTGIALAMIAAIKGYRMKLIMPENMSQERRAAMRAYGAELILVPK 117 (296)
T ss_pred Cchh--HHHHHHHHHHHHcCCCCCCCEEEE-eCCChHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEeCC
Confidence 4444 22333444445556 467776654 4555556666778888998887776766666778889999999999986
No 204
>cd01519 RHOD_HSP67B2 Member of the Rhodanese Homology Domain superfamily. This CD includes the heat shock protein 67B2 of Drosophila melanogaster and other similar proteins, many of which are uncharacterized.
Probab=26.67 E-value=2.2e+02 Score=23.53 Aligned_cols=53 Identities=9% Similarity=-0.143 Sum_probs=39.5
Q ss_pred EEeeHHHHHHHH----HHHHHHHHhCCCCCCCEEEEEccCcHhHHHHHHHHHhcCCE
Q 004977 129 EWQTYGEVFDRA----CSFASGLVNFGHNVDTRAAILAETCVEWFIAFQGCFRQSIT 181 (721)
Q Consensus 129 ~~~Ty~el~~~v----~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~ 181 (721)
..+.+.++.+.. ..+...+...++.+++.|.+++.++.....+...+...|.-
T Consensus 36 ~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivv~c~~g~~s~~~~~~l~~~G~~ 92 (106)
T cd01519 36 INIPLSSLPDALALSEEEFEKKYGFPKPSKDKELIFYCKAGVRSKAAAELARSLGYE 92 (106)
T ss_pred EEechHHhhhhhCCCHHHHHHHhcccCCCCCCeEEEECCCcHHHHHHHHHHHHcCCc
Confidence 456777765432 35666777778888999999999988777777778888864
No 205
>KOG0953 consensus Mitochondrial RNA helicase SUV3, DEAD-box superfamily [RNA processing and modification]
Probab=26.47 E-value=1.3e+02 Score=33.24 Aligned_cols=146 Identities=14% Similarity=0.147 Sum_probs=91.6
Q ss_pred ccCCCCCCCCCCccccccCC-CCccccccCCCCCCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCc
Q 004977 50 QRGVPVEVGGEPGYAIRNAQ-IPELVEVPWKGASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDY 128 (721)
Q Consensus 50 ~~~~~~~~~~~~r~~~~~~~-~~~~~~~~~~~~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~ 128 (721)
+..+.+..++.|..+....- .-...+..+.+..++.++++..++..+|..-+.
T Consensus 281 iDEIQmm~Dp~RGwAWTrALLGl~AdEiHLCGepsvldlV~~i~k~TGd~vev~-------------------------- 334 (700)
T KOG0953|consen 281 IDEIQMMRDPSRGWAWTRALLGLAADEIHLCGEPSVLDLVRKILKMTGDDVEVR-------------------------- 334 (700)
T ss_pred ehhHHhhcCcccchHHHHHHHhhhhhhhhccCCchHHHHHHHHHhhcCCeeEEE--------------------------
Confidence 66677777777765544322 011134556677899999999999999877553
Q ss_pred EEeeHHHHHHHHHHHHHHHHhC-CCCCCCEEEEEccCcHhHHHHHHHHHhcCCE-EEEecCCCCHH---HHHHHHHh--c
Q 004977 129 EWQTYGEVFDRACSFASGLVNF-GHNVDTRAAILAETCVEWFIAFQGCFRQSIT-VVTIYSSLGED---ALIHSLNE--T 201 (721)
Q Consensus 129 ~~~Ty~el~~~v~~lA~~L~~~-Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~-~vpl~~~~~~~---~l~~~l~~--~ 201 (721)
.|..|...+-.= ..+-++ ++++||+|.-++.+.+ +..-..+-+.|.- +..|+-++||+ +-+...++ .
T Consensus 335 ---~YeRl~pL~v~~-~~~~sl~nlk~GDCvV~FSkk~I--~~~k~kIE~~g~~k~aVIYGsLPPeTr~aQA~~FNd~~~ 408 (700)
T KOG0953|consen 335 ---EYERLSPLVVEE-TALGSLSNLKPGDCVVAFSKKDI--FTVKKKIEKAGNHKCAVIYGSLPPETRLAQAALFNDPSN 408 (700)
T ss_pred ---eecccCcceehh-hhhhhhccCCCCCeEEEeehhhH--HHHHHHHHHhcCcceEEEecCCCCchhHHHHHHhCCCCC
Confidence 333332222111 233333 7999999998887764 4455677788876 88888888886 34455566 6
Q ss_pred CceEEEECccchhHHHhhhhcCCCccEEEEec
Q 004977 202 QVTTLICDSKQLKKLSAVSSSLKTIKNVIYFE 233 (721)
Q Consensus 202 ~~~~vi~~~~~~~~~~~~~~~~~~~~~ii~~~ 233 (721)
++++++.++..---+ --++++||...
T Consensus 409 e~dvlVAsDAIGMGL------NL~IrRiiF~s 434 (700)
T KOG0953|consen 409 ECDVLVASDAIGMGL------NLNIRRIIFYS 434 (700)
T ss_pred ccceEEeeccccccc------ccceeEEEEee
Confidence 788888877542211 12566666644
No 206
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=26.31 E-value=6.5e+02 Score=28.43 Aligned_cols=87 Identities=7% Similarity=-0.077 Sum_probs=61.0
Q ss_pred EEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEccCcHhH-HHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEE
Q 004977 129 EWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVEW-FIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLI 207 (721)
Q Consensus 129 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~-~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi 207 (721)
..+|++.+...+..+. .....++.+++++...+|-...+ +...++.+..|+..+...+...++.+...+++.++.+++
T Consensus 199 v~~s~~~l~~~~~~~~-~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~ 277 (576)
T PRK05620 199 VVYSHRSLYLQSLSLR-TTDSLAVTHGESFLCCVPIYHVLSWGVPLAAFMSGTPLVFPGPDLSAPTLAKIIATAMPRVAH 277 (576)
T ss_pred EEEEcHHHHHHHHHhh-hhhhcCCCCCCeEEEeCChHHhhhhHHHHHHHhcCceEEecCCCCCHHHHHHHHHHhcCceee
Confidence 3578887754443322 12235788999998887765432 234467777888877666677889999999999999999
Q ss_pred ECccchhHH
Q 004977 208 CDSKQLKKL 216 (721)
Q Consensus 208 ~~~~~~~~~ 216 (721)
..+.....+
T Consensus 278 ~~P~~~~~l 286 (576)
T PRK05620 278 GVPTLWIQL 286 (576)
T ss_pred ecCHHHHHH
Confidence 887766544
No 207
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=26.29 E-value=8.2e+02 Score=26.95 Aligned_cols=82 Identities=12% Similarity=0.109 Sum_probs=54.5
Q ss_pred hCCCCCCCEEEEEccCcHh-HHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccchhHHHhhhh------
Q 004977 149 NFGHNVDTRAAILAETCVE-WFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSS------ 221 (721)
Q Consensus 149 ~~Gv~~gd~V~i~~~n~~e-~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~------ 221 (721)
..++.+++++...++-... .....+..+..|+..+.. +...++.+...+++.++.+++..+.....+.....
T Consensus 190 ~~~~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~ 268 (509)
T PRK12406 190 IYGLKPGIRALLTGPLYHSAPNAYGLRAGRLGGVLVLQ-PRFDPEELLQLIERHRITHMHMVPTMFIRLLKLPEEVRAKY 268 (509)
T ss_pred hcCCCCCceEEEEeCCcccchHHHHHHHHhhheEEEEc-cCCCHHHHHHHHHHcCCeEEEccHHHHHHHHhCchhhcccC
Confidence 4578999988877764321 122333446677776654 56788999999999999999998887655543211
Q ss_pred cCCCccEEEE
Q 004977 222 SLKTIKNVIY 231 (721)
Q Consensus 222 ~~~~~~~ii~ 231 (721)
.++.++.++.
T Consensus 269 ~~~~l~~v~~ 278 (509)
T PRK12406 269 DVSSLRHVIH 278 (509)
T ss_pred CCCceeEEEE
Confidence 2345666554
No 208
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=25.79 E-value=7.3e+02 Score=31.50 Aligned_cols=103 Identities=14% Similarity=0.019 Sum_probs=72.0
Q ss_pred EEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEccCcHhHH-HHHHHHHhcCCEEEEecC--CCCHHHHHHHHHhcCceE
Q 004977 129 EWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVEWF-IAFQGCFRQSITVVTIYS--SLGEDALIHSLNETQVTT 205 (721)
Q Consensus 129 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~-~~~lA~~~~G~~~vpl~~--~~~~~~l~~~l~~~~~~~ 205 (721)
..+|.+.+...+.... ...++.++|++...++-+.+.- .-+++.+..|+..+..++ ...++.+...+++.++.+
T Consensus 616 V~~~h~~l~~~~~~~~---~~~~~~~~d~~l~~~~~~fd~~~~~~~~~l~~G~~l~~~~~~~~~~~~~~~~~i~~~~vt~ 692 (1296)
T PRK10252 616 VMVGQTAIVNRLLWMQ---NHYPLTADDVVLQKTPCSFDVSVWEFFWPFIAGAKLVMAEPEAHRDPLAMQQFFAEYGVTT 692 (1296)
T ss_pred EEeccHHHHHHHHHHH---HhcCCCCCCEEEEeCCcchhhhHHHHHHHHhCCCEEEECChhccCCHHHHHHHHHHcCCeE
Confidence 4678887765544333 3458999999999888775543 346777888998887654 457889999999999999
Q ss_pred EEECccchhHHHhhh------hcCCCccEEEEecC
Q 004977 206 LICDSKQLKKLSAVS------SSLKTIKNVIYFEN 234 (721)
Q Consensus 206 vi~~~~~~~~~~~~~------~~~~~~~~ii~~~~ 234 (721)
+...+..+..+.... ..++.++.++.-++
T Consensus 693 ~~~~Ps~l~~l~~~~~~~~~~~~~~~lr~i~~gGe 727 (1296)
T PRK10252 693 THFVPSMLAAFVASLTPEGARQSCASLRQVFCSGE 727 (1296)
T ss_pred EEeCHHHHHHHHhhhccccccccCCCccEEEEecC
Confidence 998887765544321 12356777666544
No 209
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=25.68 E-value=2.3e+02 Score=31.00 Aligned_cols=57 Identities=5% Similarity=0.060 Sum_probs=38.4
Q ss_pred hCCCCCCCEEEEEccCcHhHHHHHHHHHhcCCEEEEecCC-----CCHHHHHHHHHhcCceEEEEC
Q 004977 149 NFGHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSS-----LGEDALIHSLNETQVTTLICD 209 (721)
Q Consensus 149 ~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~-----~~~~~l~~~l~~~~~~~vi~~ 209 (721)
+.++++||.|.+-.+.. .....++...|+.+++++.. ...+.+...+.. +.++|++.
T Consensus 105 ~~~~~pGd~VIv~~~t~---~a~~~~v~~~G~~pv~vdvd~~~~~id~~~le~~i~~-~tkaVi~~ 166 (438)
T PRK15407 105 DRALKPGDEVITVAAGF---PTTVNPIIQNGLVPVFVDVELPTYNIDASLLEAAVSP-KTKAIMIA 166 (438)
T ss_pred ccCCCCCCEEEECCCCc---HHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHcCc-CCeEEEEe
Confidence 34889999988766544 44556667789988877543 356777777754 56666654
No 210
>PRK07787 acyl-CoA synthetase; Validated
Probab=25.64 E-value=5.8e+02 Score=27.87 Aligned_cols=98 Identities=10% Similarity=0.021 Sum_probs=67.6
Q ss_pred EEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEccC--cHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEE
Q 004977 129 EWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAET--CVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTL 206 (721)
Q Consensus 129 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n--~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~v 206 (721)
..+|++.+...+..++.. .++.++|++...++- ...++..+++++..|+.++... ...++.+...++ .++.++
T Consensus 146 v~~t~~~l~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~-~~~t~~ 220 (471)
T PRK07787 146 VVLSRRAIAADLDALAEA---WQWTADDVLVHGLPLFHVHGLVLGVLGPLRIGNRFVHTG-RPTPEAYAQALS-EGGTLY 220 (471)
T ss_pred EEEeHHHHHHHHHHHHHh---cCCCccceeEeccCCeeechhHHHHHHHHhcCCEEEecC-CCCHHHHHHHHh-hCceEE
Confidence 467998887766555543 467889988766654 2345667888999999988764 467888999999 899998
Q ss_pred EECccchhHHHhhh---hcCCCccEEEE
Q 004977 207 ICDSKQLKKLSAVS---SSLKTIKNVIY 231 (721)
Q Consensus 207 i~~~~~~~~~~~~~---~~~~~~~~ii~ 231 (721)
.+.+.....+.... ..++.++.++.
T Consensus 221 ~~~P~~~~~l~~~~~~~~~l~~l~~~~~ 248 (471)
T PRK07787 221 FGVPTVWSRIAADPEAARALRGARLLVS 248 (471)
T ss_pred EcchHHHHHHHhCccccccccceeEEEE
Confidence 88887665544321 23345555544
No 211
>PF00290 Trp_syntA: Tryptophan synthase alpha chain; InterPro: IPR002028 Tryptophan synthase (4.2.1.20 from EC) catalyzes the last step in the biosynthesis of tryptophan [, ]: L-serine + 1-(indol-3-yl)glycerol 3-phosphate = L-tryptophan + glyceraldehyde 3-phosphate + H2O It has two functional domains, each found in bacteria and plants on a separate subunit. In Escherichia coli, the 2 subunits, A and B, are encoded by the trpA and trpB genes respectively. The alpha chain is for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate and the beta chain IPR006653 from INTERPRO is for the synthesis of tryptophan from indole and serine. In fungi the two domains are fused together in a single multifunctional protein, in the order: (NH2-A-B-COOH) [, ]. The two domains of the Neurospora crassa polypeptide are linked by a connector of 54-amino acid residues that has less than 25% identity to the 45-residue connector of the Saccharomyces cerevisiae (Baker's yeast) polypeptide. Two acidic residues are believed to serve as proton donors/acceptors in the enzyme's catalytic mechanism.; GO: 0004834 tryptophan synthase activity, 0006568 tryptophan metabolic process; PDB: 1TJR_B 1RD5_B 1K8X_A 1QOQ_A 1KFE_A 1KFB_A 2CLO_A 1TTP_A 2RH9_A 1K7F_A ....
Probab=25.26 E-value=5.9e+02 Score=25.57 Aligned_cols=67 Identities=9% Similarity=0.047 Sum_probs=42.1
Q ss_pred eeHHHHHH--HHHHHHHHHHhCCCCCCCEEEEEccCc--HhHHHHHHHHHhcCCEEEEe-cCCCCHHHHHHHHHhcC
Q 004977 131 QTYGEVFD--RACSFASGLVNFGHNVDTRAAILAETC--VEWFIAFQGCFRQSITVVTI-YSSLGEDALIHSLNETQ 202 (721)
Q Consensus 131 ~Ty~el~~--~v~~lA~~L~~~Gv~~gd~V~i~~~n~--~e~~~~~lA~~~~G~~~vpl-~~~~~~~~l~~~l~~~~ 202 (721)
+||....- -..++...+.+.|+ =+++.|.- .|.-...-+|.+.|...+++ .|+.+.+++..+.+.+.
T Consensus 93 m~Y~N~i~~~G~e~F~~~~~~aGv-----dGlIipDLP~ee~~~~~~~~~~~gl~~I~lv~p~t~~~Ri~~i~~~a~ 164 (259)
T PF00290_consen 93 MTYYNPIFQYGIERFFKEAKEAGV-----DGLIIPDLPPEESEELREAAKKHGLDLIPLVAPTTPEERIKKIAKQAS 164 (259)
T ss_dssp EE-HHHHHHH-HHHHHHHHHHHTE-----EEEEETTSBGGGHHHHHHHHHHTT-EEEEEEETTS-HHHHHHHHHH-S
T ss_pred EeeccHHhccchHHHHHHHHHcCC-----CEEEEcCCChHHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHhCC
Confidence 78877533 37789999988875 35555553 23333444677788877766 77788888888877764
No 212
>TIGR03595 Obg_CgtA_exten Obg family GTPase CgtA, C-terminal extension. CgtA (see model TIGR02729) is a broadly conserved member of the obg family of GTPases associated with ribosome maturation. This model represents a unique C-terminal domain found in some but not all sequences of CgtA. This region is preceded, and may be followed, by a region of low-complexity sequence.
Probab=25.03 E-value=57 Score=25.19 Aligned_cols=22 Identities=14% Similarity=0.045 Sum_probs=17.0
Q ss_pred HHHHHHHHHhCCCCCCCEEEEE
Q 004977 140 ACSFASGLVNFGHNVDTRAAIL 161 (721)
Q Consensus 140 v~~lA~~L~~~Gv~~gd~V~i~ 161 (721)
...+-..|++.|++.||.|-|.
T Consensus 42 ~~Gv~~~L~~~G~~~GD~V~Ig 63 (69)
T TIGR03595 42 KLGVEDALRKAGAKDGDTVRIG 63 (69)
T ss_pred HCCHHHHHHHcCCCCCCEEEEc
Confidence 3345667788899999999875
No 213
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=24.91 E-value=1.1e+03 Score=29.50 Aligned_cols=100 Identities=9% Similarity=0.038 Sum_probs=68.0
Q ss_pred EEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEccCc--HhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEE
Q 004977 129 EWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETC--VEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTL 206 (721)
Q Consensus 129 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~--~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~v 206 (721)
..+|.+.+...+...+. ..++.++|++...+|-. ..+...++..+..|+..+..+.....+.+...+++.+++++
T Consensus 811 v~~sh~~~~~~~~~~~~---~~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~~ 887 (1140)
T PRK06814 811 VVLSHRNLLANRAQVAA---RIDFSPEDKVFNALPVFHSFGLTGGLVLPLLSGVKVFLYPSPLHYRIIPELIYDTNATIL 887 (1140)
T ss_pred EEecHHHHHHHHHHHHH---hhCCCCcCEEEEecchHHHHHHHHHHHHHHHcCCEEEEecCcccHHHHHHHHHhcCCEEE
Confidence 46788888766665554 34788999998887753 23345567778889888776655556777888999999999
Q ss_pred EECccchhHHHhhh--hcCCCccEEEE
Q 004977 207 ICDSKQLKKLSAVS--SSLKTIKNVIY 231 (721)
Q Consensus 207 i~~~~~~~~~~~~~--~~~~~~~~ii~ 231 (721)
...+.....+.... ..++.++.++.
T Consensus 888 ~~~p~~l~~l~~~~~~~~~~~lr~v~~ 914 (1140)
T PRK06814 888 FGTDTFLNGYARYAHPYDFRSLRYVFA 914 (1140)
T ss_pred EecHHHHHHHHhhcccccccceeEEEE
Confidence 98887665544322 12345555544
No 214
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=24.85 E-value=6.2e+02 Score=27.81 Aligned_cols=100 Identities=7% Similarity=0.045 Sum_probs=68.5
Q ss_pred EEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEccCcHh-HHHHHHHHHhcCCEEEEecCC--CCHHHHHHHHHhcCceE
Q 004977 129 EWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVE-WFIAFQGCFRQSITVVTIYSS--LGEDALIHSLNETQVTT 205 (721)
Q Consensus 129 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e-~~~~~lA~~~~G~~~vpl~~~--~~~~~l~~~l~~~~~~~ 205 (721)
..+|++.+...+..+.. ..++..++++....+.... .+..+++++..|+..+...+. ..+..+...+...++..
T Consensus 159 v~~s~~~~~~~~~~~~~---~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 235 (502)
T TIGR01734 159 VQISHDNLVSFTNWMLA---DFPLSEGKQFLNQAPFSFDLSVMDLYPCLASGGTLHCLDKDITNNFKLLFEELPKTGLNV 235 (502)
T ss_pred EEEecHHHHHHHHHHHH---hCCCCCCceEEeecCceechhHHHHHHHHHCCCEEEEcCHHHhcCHHHHHHHHHHcCCeE
Confidence 46888888766554433 3578888888877765432 345677899999999888654 45678888999999999
Q ss_pred EEECccchhHHHhh----hhcCCCccEEEE
Q 004977 206 LICDSKQLKKLSAV----SSSLKTIKNVIY 231 (721)
Q Consensus 206 vi~~~~~~~~~~~~----~~~~~~~~~ii~ 231 (721)
+...+.....+... ....+.++.++.
T Consensus 236 ~~~~p~~~~~~l~~~~~~~~~~~~l~~~~~ 265 (502)
T TIGR01734 236 WVSTPSFVDMCLLDPNFNQENYPHLTHFLF 265 (502)
T ss_pred EEEChhHHHHHHhccccccccCCcccEEEE
Confidence 99988766544321 123345555555
No 215
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=24.34 E-value=1e+03 Score=26.61 Aligned_cols=90 Identities=13% Similarity=0.065 Sum_probs=68.8
Q ss_pred EEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEccCc--HhHHHHHHHHHhcCCEEEEecC-CCCHHHHHHHHHhcCceE
Q 004977 129 EWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETC--VEWFIAFQGCFRQSITVVTIYS-SLGEDALIHSLNETQVTT 205 (721)
Q Consensus 129 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~--~e~~~~~lA~~~~G~~~vpl~~-~~~~~~l~~~l~~~~~~~ 205 (721)
..+|++.+...+..+...+... +++.|++...+|-. .-+...+++.+..|+..+...+ .+.++.+...+...++..
T Consensus 189 v~~th~~~~~~~~~~~~~~~~~-~~~~d~~l~~lPl~H~~Gl~~~~~~~~~~G~~~v~~~~~~f~~~~~~~~i~~~~~t~ 267 (534)
T COG0318 189 VVLTHRNLLANAAGIAAALGGG-LTPDDVVLSWLPLFHIFGLIVGLLAPLLGGGTLVLLSPEPFDPEEVLWLIEKYKVTV 267 (534)
T ss_pred eEEecHhHHHHHHHHHHHhccc-CCCCceEEEecChHHHHHHHHHHHHHHHcCCEEEeCCCCCcCHHHHHHHHHHhcceE
Confidence 4679999988877776665432 77888877777754 5667778888999998888875 688989999999888888
Q ss_pred EEECccchhHHHhh
Q 004977 206 LICDSKQLKKLSAV 219 (721)
Q Consensus 206 vi~~~~~~~~~~~~ 219 (721)
+...+.....+...
T Consensus 268 ~~~vPt~~~~ll~~ 281 (534)
T COG0318 268 LSGVPTFLRELLDN 281 (534)
T ss_pred EecchHHHHHHHhC
Confidence 88888776655443
No 216
>PF05452 Clavanin: Clavanin; InterPro: IPR008453 This family consists of clavanin proteins from the haemocytes of the invertebrate Styela clava (Sea squirt), a solitary tunicate. The family is made up of four alpha-helical antimicrobial peptides, clavanins A, B, C and D. The tunicate peptides resemble magainins in size, primary sequence and antibacterial activity. Synthetic clavanin A displays comparable antimicrobial activity to magainins and cecropins. The presence of alpha-helical antimicrobial peptides in the haemocytes of a urochordate suggests that such peptides are primeval effectors of innate immunity in the vertebrate lineage [].; GO: 0005576 extracellular region
Probab=24.13 E-value=33 Score=25.70 Aligned_cols=11 Identities=45% Similarity=1.126 Sum_probs=8.4
Q ss_pred CCCcceEeeCc
Q 004977 556 ERGMCWFYTGD 566 (721)
Q Consensus 556 ~~g~gw~~TGD 566 (721)
.+|.-||.|||
T Consensus 69 dngkhwydtgd 79 (80)
T PF05452_consen 69 DNGKHWYDTGD 79 (80)
T ss_pred cCCcccccCCC
Confidence 34557999998
No 217
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=24.07 E-value=3.3e+02 Score=28.50 Aligned_cols=61 Identities=11% Similarity=0.015 Sum_probs=46.4
Q ss_pred HHHhCCCCCCCEEEEEccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECc
Q 004977 146 GLVNFGHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDS 210 (721)
Q Consensus 146 ~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~ 210 (721)
.|+..+++||++|+|..--+.-.++..+|-..- +-++.++-+.. -....++.+++.++...
T Consensus 158 alk~~~~~pG~~V~I~G~GGlGh~avQ~Aka~g-a~Via~~~~~~---K~e~a~~lGAd~~i~~~ 218 (339)
T COG1064 158 ALKKANVKPGKWVAVVGAGGLGHMAVQYAKAMG-AEVIAITRSEE---KLELAKKLGADHVINSS 218 (339)
T ss_pred ehhhcCCCCCCEEEEECCcHHHHHHHHHHHHcC-CeEEEEeCChH---HHHHHHHhCCcEEEEcC
Confidence 456678999999999999988888888887544 87877765533 33456677888888865
No 218
>TIGR01136 cysKM cysteine synthases. This model discriminates cysteine synthases (EC 2.5.1.47) (both CysK and CysM) from cystathionine beta-synthase, a protein found primarily in eukaryotes and carrying a C-terminal CBS domain lacking from this protein. Bacterial proteins lacking the CBS domain but otherwise showing resemblamnce to cystathionine beta-synthases and considerable phylogenetic distance from known cysteine synthases were excluded from the seed and score below the trusted cutoff.
Probab=24.03 E-value=5.4e+02 Score=26.34 Aligned_cols=66 Identities=6% Similarity=-0.093 Sum_probs=47.0
Q ss_pred HHHHhCCC-CCCCEEEEEccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECcc
Q 004977 145 SGLVNFGH-NVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSK 211 (721)
Q Consensus 145 ~~L~~~Gv-~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~ 211 (721)
..+.+.|. .+|+.| +....+-.-...-++|.+.|..++.+-|...+......++..++++++++..
T Consensus 47 ~~a~~~g~~~~g~~v-v~aSsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~GA~v~~~~~~ 113 (299)
T TIGR01136 47 EDAEKRGLLKPGDTI-IEATSGNTGIALAMVAAAKGYKLILTMPETMSLERRKLLRAYGAELILTPAE 113 (299)
T ss_pred HHHHHcCCCCCCCEE-EEeCCChHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEeCCC
Confidence 33445554 677766 4555555666666777889988877777665566678899999999999865
No 219
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=23.60 E-value=3.4e+02 Score=29.64 Aligned_cols=33 Identities=15% Similarity=0.211 Sum_probs=17.4
Q ss_pred HHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEE
Q 004977 175 CFRQSITVVTIYSSLGEDALIHSLNETQVTTLIC 208 (721)
Q Consensus 175 ~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~ 208 (721)
+.+.|+.+..++....+++++..++. +.++|++
T Consensus 121 l~~~Gi~v~~vd~~~d~~~l~~~I~~-~Tk~I~~ 153 (432)
T PRK06702 121 LRKLGIDVTFFNPNLTADEIVALAND-KTKLVYA 153 (432)
T ss_pred HHHCCCEEEEECCCCCHHHHHHhCCc-CCeEEEE
Confidence 34556666566555555555555543 3444444
No 220
>PF06543 Lac_bphage_repr: Lactococcus bacteriophage repressor; InterPro: IPR009498 This entry represents the C terminus of various Lactococcus bacteriophage repressor proteins.
Probab=23.55 E-value=59 Score=22.71 Aligned_cols=26 Identities=15% Similarity=0.516 Sum_probs=21.0
Q ss_pred EEEEecCCCCCHHHHHHHHHhhCCcc
Q 004977 448 RFMICGGAPLSADSQRFINICMGAPI 473 (721)
Q Consensus 448 r~v~~gG~~l~~~~~~~~~~~~g~~l 473 (721)
+.+.++|.||+.++...++..+|-++
T Consensus 22 ~wvSf~GrPltdevK~a~k~i~~~~l 47 (49)
T PF06543_consen 22 KWVSFDGRPLTDEVKEAMKLIFGKRL 47 (49)
T ss_pred HheeeCCeeCCHHHHHHHHHHHhhhc
Confidence 45778999999999998888776543
No 221
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=23.41 E-value=8.9e+02 Score=27.66 Aligned_cols=69 Identities=12% Similarity=0.045 Sum_probs=51.3
Q ss_pred CCCCCCCEEEEEccCcHh--HHHHHHHHHhcCCEEEEecC--C-CCHHHHHHHHHhcCceEEEECccchhHHHh
Q 004977 150 FGHNVDTRAAILAETCVE--WFIAFQGCFRQSITVVTIYS--S-LGEDALIHSLNETQVTTLICDSKQLKKLSA 218 (721)
Q Consensus 150 ~Gv~~gd~V~i~~~n~~e--~~~~~lA~~~~G~~~vpl~~--~-~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 218 (721)
.+++++|++....+-+.- ....+++.+..|+..+..+. . ..++++..++++.+++++.+.+.....+.+
T Consensus 273 ~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~ 346 (625)
T TIGR02188 273 FDIKDGDIFWCTADVGWITGHSYIVYGPLANGATTVMFEGTPTYPDPGRFWEIIEKHKVTIFYTAPTAIRALMR 346 (625)
T ss_pred cCCCCCcEEEECCCchhhhccHHHHHHHHHcCCeEEEECCCCCCCChhHHHHHHHHhCCeEEEeCHHHHHHHHh
Confidence 378899988766554422 22457888999998887643 2 357889999999999999999887766654
No 222
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=23.19 E-value=6.9e+02 Score=27.02 Aligned_cols=81 Identities=10% Similarity=-0.015 Sum_probs=58.7
Q ss_pred EeeHHHHHHHH-HHHHHHHHhCCCCCCCEEEEEccCcHhHHHHHHHHHhcCCEEEEe--cCCCCHHHHHHHHHhcCceEE
Q 004977 130 WQTYGEVFDRA-CSFASGLVNFGHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTI--YSSLGEDALIHSLNETQVTTL 206 (721)
Q Consensus 130 ~~Ty~el~~~v-~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl--~~~~~~~~l~~~l~~~~~~~v 206 (721)
.+.|.+-.--+ .++...+.+..--+|-+|+.+++-.++..+.+..+..+|+-+... ||....++....|.+.+..+.
T Consensus 6 ~i~w~~~~mp~l~~~~~~~~~~~pl~G~~i~~~~hl~~~Ta~l~~~L~~~GA~v~~~~~np~stqd~vaaaL~~~gi~v~ 85 (406)
T TIGR00936 6 KIEWAEREMPVLMRIRERFSEEKPLKGARIAACLHVTVETAVLIETLVAGGAEVAWTSCNPLSTQDDVAAALAKAGIPVF 85 (406)
T ss_pred HHHHHHHHCHHHHHHHHHHhccCCCCCCEEEEEEechHHHHHHHHHHHHcCCEEEEEccCCccccHHHHHHHHhCCceEE
Confidence 34554433322 223334444445578999999999999999999999999976655 888888999999999898876
Q ss_pred EECc
Q 004977 207 ICDS 210 (721)
Q Consensus 207 i~~~ 210 (721)
-...
T Consensus 86 a~~~ 89 (406)
T TIGR00936 86 AWRG 89 (406)
T ss_pred EecC
Confidence 5443
No 223
>PLN02736 long-chain acyl-CoA synthetase
Probab=23.00 E-value=7.2e+02 Score=28.72 Aligned_cols=84 Identities=8% Similarity=-0.028 Sum_probs=61.4
Q ss_pred EEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEccCcH--hHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEE
Q 004977 129 EWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCV--EWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTL 206 (721)
Q Consensus 129 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~--e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~v 206 (721)
..+|++.+...+..+.. ..++.++|++..++|-.- .++ .+++++..|+.++.... .+..+...+++.++.++
T Consensus 239 V~lsh~~l~~~~~~~~~---~~~~~~~d~~l~~lPl~h~~~~~-~~~~~l~~G~~i~~~~~--~~~~~~~~i~~~~~t~~ 312 (651)
T PLN02736 239 VVLTHGNLIANVAGSSL---STKFYPSDVHISYLPLAHIYERV-NQIVMLHYGVAVGFYQG--DNLKLMDDLAALRPTIF 312 (651)
T ss_pred EEEecHHHHHHHHHHHh---ccCCCCCCEEEEeCCHHHHHHHH-HHHHHHHcCCEEEEeCC--CHHHHHHHHHHhCCcEE
Confidence 46899988777766654 347889999888887643 333 45667788888766542 56788889999999999
Q ss_pred EECccchhHHHh
Q 004977 207 ICDSKQLKKLSA 218 (721)
Q Consensus 207 i~~~~~~~~~~~ 218 (721)
+..+..+..+..
T Consensus 313 ~~vP~~~~~l~~ 324 (651)
T PLN02736 313 CSVPRLYNRIYD 324 (651)
T ss_pred ecchHHHHHHHH
Confidence 998877665543
No 224
>PLN03013 cysteine synthase
Probab=22.72 E-value=5.8e+02 Score=27.78 Aligned_cols=66 Identities=5% Similarity=-0.140 Sum_probs=49.4
Q ss_pred HHHhCC-CCCCCEEEEEccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECcc
Q 004977 146 GLVNFG-HNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSK 211 (721)
Q Consensus 146 ~L~~~G-v~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~ 211 (721)
.+.+.| +++|....|....+---+..-++|...|..++.+-|...+.+....++..++++++++..
T Consensus 164 ~a~~~G~l~pG~~~VVeaSSGN~G~ALA~~a~~~G~~~~VvvP~~~s~~K~~~ira~GAeVi~v~~~ 230 (429)
T PLN03013 164 DAEQKGFISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVLTDPA 230 (429)
T ss_pred HHHHcCCcCCCCcEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHcCCEEEEECCC
Confidence 344555 478865556666666667777788889988777767667777788999999999999764
No 225
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme. Members of this family form a distinct clade within a larger family of proteins that also includes coenzyme F390 synthetase, an enzyme known in Methanobacterium thermoautotrophicum and a few other methanogenic archaea. That enzyme adenylates coenzyme F420 to F390, a reversible process, during oxygen stress. Other informative homologies include domains of the non-ribosomal peptide synthetases involved in activation by adenylation. The family defined by this model is likely to be of an adenylate-forming enzyme related to but distinct from coenzyme F390 synthetase.
Probab=22.59 E-value=9.9e+02 Score=26.07 Aligned_cols=81 Identities=17% Similarity=0.109 Sum_probs=50.5
Q ss_pred CCCCCCCEEEEEccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccchhHHHhhhh--cC-CCc
Q 004977 150 FGHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSS--SL-KTI 226 (721)
Q Consensus 150 ~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~--~~-~~~ 226 (721)
.|...|++++.+..-+....-. +.....-+...+...+.++....|++.+|.++++.+.....+..... .+ ..+
T Consensus 138 ~g~~~g~r~a~~~~~~~~ly~~---~~~~~~~~~~~~l~~~~~~~l~~L~~~~P~~L~g~pS~l~~LA~~~~~~~l~~~~ 214 (430)
T TIGR02304 138 DGLFAKHRIAFFLRADNNLYQS---VNNRWISLDFFDLLAPFQAHIKRLNQRKPSIIVAPPSVLRALALEVMEGELTIKP 214 (430)
T ss_pred cccccCCcEEEEEccChhHHHH---HHhccceeeecCCCcCHHHHHHHHHHhCCCEEEEcHHHHHHHHHHHHhcCCCCCc
Confidence 3889999999995333322211 22222213344444668889999999999999999987765555332 11 345
Q ss_pred cEEEEec
Q 004977 227 KNVIYFE 233 (721)
Q Consensus 227 ~~ii~~~ 233 (721)
+.++..+
T Consensus 215 k~ii~~~ 221 (430)
T TIGR02304 215 KKVISVA 221 (430)
T ss_pred eEEEEcc
Confidence 5666544
No 226
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=22.39 E-value=1e+03 Score=26.02 Aligned_cols=102 Identities=7% Similarity=0.032 Sum_probs=69.5
Q ss_pred EEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEccCcHhH-HHHHHHHHhcCCEEEEecCC--CCHHHHHHHHHhcCceE
Q 004977 129 EWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVEW-FIAFQGCFRQSITVVTIYSS--LGEDALIHSLNETQVTT 205 (721)
Q Consensus 129 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~-~~~~lA~~~~G~~~vpl~~~--~~~~~l~~~l~~~~~~~ 205 (721)
..+|++.+...+...+.. .++..++++....+-+... +..+++++..|+..+..... ..+..+...++..++..
T Consensus 161 v~~t~~~~~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~v~~~~~~~~~~~~~~~~~~~~~~t~ 237 (503)
T PRK04813 161 VQISHDNLVSFTNWMLED---FALPEGPQFLNQAPYSFDLSVMDLYPTLASGGTLVALPKDMTANFKQLFETLPQLPINV 237 (503)
T ss_pred EEeehHHHHHHHHHHHHH---cCCCcCceeeecCCcchhHhHHHHHHHHhcCCEEEEcChhhhcCHHHHHHHHHHcCCeE
Confidence 468999888766655544 5678888887777665332 34556778889888777653 35678888899999999
Q ss_pred EEECccchhHHHhh----hhcCCCccEEEEec
Q 004977 206 LICDSKQLKKLSAV----SSSLKTIKNVIYFE 233 (721)
Q Consensus 206 vi~~~~~~~~~~~~----~~~~~~~~~ii~~~ 233 (721)
+...+.....+... ...++.++.++..+
T Consensus 238 ~~~~p~~~~~~~~~~~~~~~~~~~l~~i~~~G 269 (503)
T PRK04813 238 WVSTPSFADMCLLDPSFNEEHLPNLTHFLFCG 269 (503)
T ss_pred EEeChHHHHHHHHhhccCcccCCCceEEEEec
Confidence 98887766443221 13445677776644
No 227
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=22.34 E-value=8.5e+02 Score=27.62 Aligned_cols=84 Identities=7% Similarity=-0.013 Sum_probs=60.5
Q ss_pred EEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEccCcHh--HHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEE
Q 004977 129 EWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVE--WFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTL 206 (721)
Q Consensus 129 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e--~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~v 206 (721)
..+|.+.+...+..+... .++.++|++...+|-... ++..+++.+..|+..+. .+...+..+...++..++.++
T Consensus 217 V~~sh~~l~~~~~~~~~~---~~l~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~v~-~~~~~~~~~~~~i~~~~~t~~ 292 (600)
T PRK08279 217 AVMSHMRWLKAMGGFGGL---LRLTPDDVLYCCLPLYHNTGGTVAWSSVLAAGATLAL-RRKFSASRFWDDVRRYRATAF 292 (600)
T ss_pred EEEeHHHHHHHHHHHHHh---cCCCCCcEEEEecCchhhhhHHHHHHHHHhcCcEEEE-cCCCCHHHHHHHHHHhcceEE
Confidence 468998888776665544 578899999888876543 33455566777776665 456778888889999999998
Q ss_pred EECccchhHH
Q 004977 207 ICDSKQLKKL 216 (721)
Q Consensus 207 i~~~~~~~~~ 216 (721)
...+.....+
T Consensus 293 ~~~p~l~~~l 302 (600)
T PRK08279 293 QYIGELCRYL 302 (600)
T ss_pred eehHHHHHHH
Confidence 8776655443
No 228
>PF06277 EutA: Ethanolamine utilisation protein EutA; InterPro: IPR009377 Proteins in this entry are EutA ethanolamine utilization proteins, reactivating factors for ethanolamine ammonia lyase, encoded by the ethanolamine utilization eut operon. The holoenzyme of adenosylcobalamin-dependent ethanolamine ammonia-lyase (EutBC, IPR0092462 from INTERPRO, IPR010628 from INTERPRO), which is part of the ethanolamine utilization pathway [, , ], undergoes suicidal inactivation during catalysis as well as inactivation in the absence of substrate. The inactivation involves the irreversible cleavage of the Co-C bond of the coenzyme. The inactivated holoenzyme undergoes rapid and continuous reactivation in the presence of ATP, Mg2+, and free adenosylcobalamin in permeabilised cells (in situ), homogenate, and cell extracts of Escherichia coli. The EutA protein is essential for reactivation. It was demonstrated with purified recombinant EutA that both the suicidally inactivated and O2-inactivated holoethanolamine ammonia lyase underwent rapid reactivation in vitro by EutA in the presence of adenosylcobalamin, ATP, and Mg2+ []. The inactive enzyme-cyanocobalamin complex was also activated in situ and in vitro by EutA under the same conditions. Thus EutA is believed to be the only component of the reactivating factor for ethanolamine ammonia lyase. Reactivation and activation occur through the exchange of modified coenzyme for free intact adenosylcobalamin []. Bacteria that harbor the ethanolamine utilization pathway can use ethanolamine as a source of carbon and nitrogen. For more information on the ethanolamine utilization pathway, please see IPR009194 from INTERPRO, IPR012408 from INTERPRO.
Probab=22.07 E-value=5.2e+02 Score=28.39 Aligned_cols=66 Identities=17% Similarity=0.227 Sum_probs=46.8
Q ss_pred CCHHHHHHHHHHhCC-----CCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCCC
Q 004977 82 STMAALFEQSCKSHP-----QDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDT 156 (721)
Q Consensus 82 ~tl~~~~~~~a~~~p-----d~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd 156 (721)
..+.+.+++....+- +..|+.. .|. ...+|+++.+.+..++.++.+. +.++.
T Consensus 353 ~~l~~~i~~~l~~~~~~~~~~~~Alal------------~g~----------~~~~f~~iq~lA~~i~~~~~~~-~~~~~ 409 (473)
T PF06277_consen 353 EELAEAIREALEWFDLEGEDQPVALAL------------PGK----------PNPSFAEIQELAEAIAEGMAEL-INPDQ 409 (473)
T ss_pred HHHHHHHHHHHHhhcccCCCCcEEEEe------------CCC----------CCCCHHHHHHHHHHHHHHHHhh-ccCCC
Confidence 467777777766632 3445543 333 3589999999999999999876 67777
Q ss_pred EEEEEccCcHhHHH
Q 004977 157 RAAILAETCVEWFI 170 (721)
Q Consensus 157 ~V~i~~~n~~e~~~ 170 (721)
...|++++..--+.
T Consensus 410 Plivv~e~D~aKvL 423 (473)
T PF06277_consen 410 PLIVVVEQDMAKVL 423 (473)
T ss_pred CEEEEECchHHHHH
Confidence 88888887655443
No 229
>PRK13388 acyl-CoA synthetase; Provisional
Probab=21.76 E-value=1e+03 Score=26.54 Aligned_cols=82 Identities=10% Similarity=0.075 Sum_probs=56.3
Q ss_pred EEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEccCcHh--HHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEE
Q 004977 129 EWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVE--WFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTL 206 (721)
Q Consensus 129 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e--~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~v 206 (721)
..+|+..+...+..+.. ..+++++|++..+++-... ++..+++.+..|+..+. .+...+..+...+++.++.++
T Consensus 168 v~~s~~~~~~~~~~~~~---~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~v~-~~~~~~~~~~~~i~~~~vt~~ 243 (540)
T PRK13388 168 VRCSHGRLAFAGRALTE---RFGLTRDDVCYVSMPLFHSNAVMAGWAPAVASGAAVAL-PAKFSASGFLDDVRRYGATYF 243 (540)
T ss_pred EEecHHHHHHHHHHHHH---HhCCCCCCEEEEeeCchhhcchHHHHHHHHHcCcEEEE-CCCCCHHHHHHHHHHhCCeEE
Confidence 35788887665554433 3478999998887765432 23344556777877654 456778889999999999998
Q ss_pred EECccchh
Q 004977 207 ICDSKQLK 214 (721)
Q Consensus 207 i~~~~~~~ 214 (721)
........
T Consensus 244 ~~~p~~l~ 251 (540)
T PRK13388 244 NYVGKPLA 251 (540)
T ss_pred EehHHHHH
Confidence 76655443
No 230
>PRK06381 threonine synthase; Validated
Probab=21.59 E-value=3.3e+02 Score=28.17 Aligned_cols=64 Identities=6% Similarity=-0.058 Sum_probs=45.7
Q ss_pred HHHhCCCCCCCEEEEEccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccch
Q 004977 146 GLVNFGHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQL 213 (721)
Q Consensus 146 ~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~ 213 (721)
.+.+.|. +.| +....+-.-+.+-++|...|..+..+-|...+......++..+++++++.....
T Consensus 57 ~a~~~g~---~~l-v~aSsGN~g~alA~~aa~~G~~~~ivvp~~~~~~~~~~l~~~GA~V~~~~~~~~ 120 (319)
T PRK06381 57 RAMRLGY---SGI-TVGTCGNYGASIAYFARLYGLKAVIFIPRSYSNSRVKEMEKYGAEIIYVDGKYE 120 (319)
T ss_pred HHHHcCC---CEE-EEeCCcHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEcCCCHH
Confidence 3445553 344 445567777777888899998887766665556666789999999999987543
No 231
>PRK09274 peptide synthase; Provisional
Probab=21.50 E-value=9.1e+02 Score=26.98 Aligned_cols=94 Identities=17% Similarity=0.140 Sum_probs=61.4
Q ss_pred EEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEccCcHhHHHHHHHHHhcCCEEEEecC------CCCHHHHHHHHHhcC
Q 004977 129 EWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYS------SLGEDALIHSLNETQ 202 (721)
Q Consensus 129 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~------~~~~~~l~~~l~~~~ 202 (721)
..+|++.+...+..+... .++.++|++...+|-. .+++. ..|+..+.... ...++++...+++.+
T Consensus 192 v~~s~~~l~~~~~~~~~~---~~~~~~~~~~~~~pl~-----~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 262 (552)
T PRK09274 192 VVYTHGMFEAQIEALRED---YGIEPGEIDLPTFPLF-----ALFGP-ALGMTSVIPDMDPTRPATVDPAKLFAAIERYG 262 (552)
T ss_pred EEecHHHHHHHHHHHHHH---hCCCCCceeeeccCHH-----Hhhhh-hhCCeEEecCcccccccccCHHHHHHHHHHcC
Confidence 468999887766655443 4788899876665521 22332 34655544321 346789999999999
Q ss_pred ceEEEECccchhHHHhhhh----cCCCccEEEE
Q 004977 203 VTTLICDSKQLKKLSAVSS----SLKTIKNVIY 231 (721)
Q Consensus 203 ~~~vi~~~~~~~~~~~~~~----~~~~~~~ii~ 231 (721)
+.++++.+.....+.+... .++.++.++.
T Consensus 263 vt~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~ 295 (552)
T PRK09274 263 VTNLFGSPALLERLGRYGEANGIKLPSLRRVIS 295 (552)
T ss_pred CeEEeccHHHHHHHHHHhhhcCCCCchhhEEEe
Confidence 9999999888766654322 4456666655
No 232
>PLN02614 long-chain acyl-CoA synthetase
Probab=21.47 E-value=7.6e+02 Score=28.68 Aligned_cols=86 Identities=10% Similarity=0.004 Sum_probs=62.1
Q ss_pred EEeeHHHHHHHHHHHHHHHHh--CCCCCCCEEEEEccCc--HhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCce
Q 004977 129 EWQTYGEVFDRACSFASGLVN--FGHNVDTRAAILAETC--VEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVT 204 (721)
Q Consensus 129 ~~~Ty~el~~~v~~lA~~L~~--~Gv~~gd~V~i~~~n~--~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~ 204 (721)
..+|++.+...+..+...+.. .++.++|++..++|-+ .+..+ .+.++..|+.++... ..++.+...++..++.
T Consensus 241 V~lth~nl~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~~~~~~-~~~~l~~G~~v~~~~--~~~~~~~~~i~~~~~T 317 (666)
T PLN02614 241 VMISNESIVTLIAGVIRLLKSANAALTVKDVYLSYLPLAHIFDRVI-EECFIQHGAAIGFWR--GDVKLLIEDLGELKPT 317 (666)
T ss_pred EEEecHHHHHHHHHHHhhccccccCCCCCcEEEEeccHHHHHHHHH-HHHHHHhCCEEEEeC--CCHHHHHHHHHHhCCe
Confidence 468998887776655544321 3678899998888865 44433 455677888776543 3678899999999999
Q ss_pred EEEECccchhHHH
Q 004977 205 TLICDSKQLKKLS 217 (721)
Q Consensus 205 ~vi~~~~~~~~~~ 217 (721)
+++.-+..+..+.
T Consensus 318 ~~~~vP~~~~~l~ 330 (666)
T PLN02614 318 IFCAVPRVLDRVY 330 (666)
T ss_pred EEEecHHHHHHHH
Confidence 9999988776554
No 233
>cd00640 Trp-synth-beta_II Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-dependent enzymes catalyzes beta-replacement and beta-elimination reactions. This CD corresponds to aminocyclopropane-1-carboxylate deaminase (ACCD), tryptophan synthase beta chain (Trp-synth_B), cystathionine beta-synthase (CBS), O-acetylserine sulfhydrylase (CS), serine dehydratase (Ser-dehyd), threonine dehydratase (Thr-dehyd), diaminopropionate ammonia lyase (DAL), and threonine synthase (Thr-synth). ACCD catalyzes the conversion of 1-aminocyclopropane-1-carboxylate to alpha-ketobutyrate and ammonia. Tryptophan synthase folds into a tetramer, where the beta chain is the catalytic PLP-binding subunit and catalyzes the formation of L-tryptophan from indole and L-serine. CBS is a tetrameric hemeprotein that catalyzes condensation of serine and homocysteine to cystathionine. CS is a homodimer that catalyzes the formation of L-cysteine from O-acetyl-L-serine. Ser-dehy
Probab=21.37 E-value=7.8e+02 Score=24.09 Aligned_cols=66 Identities=3% Similarity=-0.114 Sum_probs=46.7
Q ss_pred HHHhCCCCCCCEEEEEccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccc
Q 004977 146 GLVNFGHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQ 212 (721)
Q Consensus 146 ~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~ 212 (721)
.+.+.|..++..|... ..+-.-....++|...|..++.+-|...+......++..+++++.++...
T Consensus 41 ~a~~~g~~~~~~vv~~-ssGN~g~alA~~a~~~g~~~~v~~p~~~~~~~~~~~~~~Ga~v~~~~~~~ 106 (244)
T cd00640 41 LAEEEGKLPKGVIIES-TGGNTGIALAAAAARLGLKCTIVMPEGASPEKVAQMRALGAEVVLVPGDF 106 (244)
T ss_pred HHHHcCCCCCCEEEEe-CCcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCCH
Confidence 3444443345555444 44555666677788899888888777777788888999999999998764
No 234
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=21.10 E-value=1e+03 Score=27.29 Aligned_cols=84 Identities=6% Similarity=0.075 Sum_probs=57.4
Q ss_pred CCCCCCCEEEEEccCcHh--HHHHHHHHHhcCCEEEEecC---CCCHHHHHHHHHhcCceEEEECccchhHHHhhhh---
Q 004977 150 FGHNVDTRAAILAETCVE--WFIAFQGCFRQSITVVTIYS---SLGEDALIHSLNETQVTTLICDSKQLKKLSAVSS--- 221 (721)
Q Consensus 150 ~Gv~~gd~V~i~~~n~~e--~~~~~lA~~~~G~~~vpl~~---~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~--- 221 (721)
.+++++|++....+-+.. ....+++.+..|+..+.... ...+..+..++++.++.++.+.+.....+.....
T Consensus 270 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~g~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~ 349 (629)
T PRK10524 270 FGGKAGETFFCASDIGWVVGHSYIVYAPLLAGMATIMYEGLPTRPDAGIWWRIVEKYKVNRMFSAPTAIRVLKKQDPALL 349 (629)
T ss_pred cCCCCCCEEEEcCCCCeeccchHHHHHHHhCCCEEEEECCCCCCCChHHHHHHHHHcCceEEEeCHHHHHHHHhcCcccc
Confidence 478899988776654432 23457888899998886642 2347788899999999999999887766544221
Q ss_pred ---cCCCccEEEEec
Q 004977 222 ---SLKTIKNVIYFE 233 (721)
Q Consensus 222 ---~~~~~~~ii~~~ 233 (721)
.++.++.++..+
T Consensus 350 ~~~~l~~lr~i~~~G 364 (629)
T PRK10524 350 RKHDLSSLRALFLAG 364 (629)
T ss_pred cccChhheeEEEEeC
Confidence 234566665533
No 235
>PRK06060 acyl-CoA synthetase; Validated
Probab=21.05 E-value=7.8e+02 Score=28.76 Aligned_cols=104 Identities=6% Similarity=-0.058 Sum_probs=68.8
Q ss_pred EEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEccCcH--hHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEE
Q 004977 129 EWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCV--EWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTL 206 (721)
Q Consensus 129 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~--e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~v 206 (721)
..+|++.+...+..+.. ...++.++|++....+-.. .+...++..+..|+..+..+....++.+..+++..++.++
T Consensus 163 V~~sh~~~~~~~~~~~~--~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~ 240 (705)
T PRK06060 163 AIHRHADPLTFVDAMCR--KALRLTPEDTGLCSARMYFAYGLGNSVWFPLATGGSAVINSAPVTPEAAAILSARFGPSVL 240 (705)
T ss_pred EEEccccHHHHHHHHHH--HhhCCCCcceeEEeccchhhcchhHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHhcCCeEE
Confidence 35777777665544432 2346788888776665432 2234456778888888877666778888889999999999
Q ss_pred EECccchhHHHhhh--hcCCCccEEEEecC
Q 004977 207 ICDSKQLKKLSAVS--SSLKTIKNVIYFEN 234 (721)
Q Consensus 207 i~~~~~~~~~~~~~--~~~~~~~~ii~~~~ 234 (721)
.+.+.....+.... ..++.++.++..++
T Consensus 241 ~~~P~~l~~l~~~~~~~~~~slr~i~~gGe 270 (705)
T PRK06060 241 YGVPNFFARVIDSCSPDSFRSLRCVVSAGE 270 (705)
T ss_pred eeHHHHHHHHHHhcccccccceeEEEEecC
Confidence 98887766554322 23456776666443
No 236
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=20.82 E-value=9.9e+02 Score=27.41 Aligned_cols=83 Identities=10% Similarity=0.056 Sum_probs=56.7
Q ss_pred CCCCCCCEEEEEccCcHh--HHHHHHHHHhcCCEEEEecC--C-CCHHHHHHHHHhcCceEEEECccchhHHHhhhh---
Q 004977 150 FGHNVDTRAAILAETCVE--WFIAFQGCFRQSITVVTIYS--S-LGEDALIHSLNETQVTTLICDSKQLKKLSAVSS--- 221 (721)
Q Consensus 150 ~Gv~~gd~V~i~~~n~~e--~~~~~lA~~~~G~~~vpl~~--~-~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~--- 221 (721)
.+++++|++...++-+.. ....+++.+..|+..+.... . ..++.+..++++.++.++.+.+.....+.....
T Consensus 282 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~ 361 (637)
T PRK00174 282 FDYKDGDVYWCTADVGWVTGHSYIVYGPLANGATTLMFEGVPNYPDPGRFWEVIDKHKVTIFYTAPTAIRALMKEGDEHP 361 (637)
T ss_pred cCCCCCcEEEEcCCchHhhhhHHHHHHHHHcCCEEEEECCCCCCCChHHHHHHHHhcCCeEEeecHHHHHHHHhcCCccc
Confidence 478889987766654322 12457888899998887642 2 357889999999999999999887765544321
Q ss_pred ---cCCCccEEEEe
Q 004977 222 ---SLKTIKNVIYF 232 (721)
Q Consensus 222 ---~~~~~~~ii~~ 232 (721)
.++.++.++..
T Consensus 362 ~~~~~~~lr~i~~~ 375 (637)
T PRK00174 362 KKYDLSSLRLLGSV 375 (637)
T ss_pred ccCCccceeEEEEe
Confidence 23455655543
No 237
>TIGR02898 spore_YhcN_YlaJ sporulation lipoprotein, YhcN/YlaJ family. YhcN and YlaJ are predicted lipoproteins that have been detected as spore proteins but not vegetative proteins in Bacillus subtilis. Both appear to be expressed under control of the RNA polymerase sigma-G factor. The YlaJ-like members of this family have a low-complexity, strongly acidic 40-residue C-terminal domain that is not included in the seed alignment for this model. A portion of the low-complexity region between the lipoprotein signal sequence and the main conserved region of the protein family was also excised from the seed alignment.
Probab=20.79 E-value=4.1e+02 Score=24.40 Aligned_cols=31 Identities=6% Similarity=0.048 Sum_probs=22.7
Q ss_pred hHHHHHHhcCcccceEEEEecCCCceEEEEEE
Q 004977 597 GKVEAALISSDYVDNIMIHADPFHNYCVALVV 628 (721)
Q Consensus 597 ~eIE~~l~~~p~V~~~~V~g~~~~~~~~a~vv 628 (721)
..|.+.+.+.|+|.+|.|+-.. ...+||+-.
T Consensus 57 ~~Ia~~v~~v~~V~dA~vvVtg-~~A~Vgv~~ 87 (158)
T TIGR02898 57 DEIASEAAKVKGVKDATVVITG-NYAYVGVDL 87 (158)
T ss_pred HHHHHHHhcCCCCceEEEEEEC-CEEEEEEEc
Confidence 5678888899999998888765 344555543
No 238
>PHA02885 putative interleukin binding protein; Provisional
Probab=20.35 E-value=3.6e+02 Score=22.35 Aligned_cols=39 Identities=26% Similarity=0.348 Sum_probs=29.0
Q ss_pred ceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHh
Q 004977 560 CWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALI 604 (721)
Q Consensus 560 gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~ 604 (721)
+...||=+- .+||+++.+|-.. .+-|++|+++.+|.+..
T Consensus 49 rllcs~~ln--sedgyiywi~pnn----tspgeyif~enl~g~~e 87 (135)
T PHA02885 49 RLLCSGCLN--SEDGYIYWIGPNN----TSPGEYIFIENLEGANE 87 (135)
T ss_pred hheeeeeec--CCCceEEEEeCCC----CCCcceeeeeccccccc
Confidence 677777543 3789999999765 34599999988876554
No 239
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=20.25 E-value=2.9e+02 Score=28.15 Aligned_cols=64 Identities=11% Similarity=-0.007 Sum_probs=54.0
Q ss_pred CCCCCCEEEEEccCcHhHHHHHHHHHhcCCEEEE-ecCCCCHHHHHHHHHhcCceEEEECccchh
Q 004977 151 GHNVDTRAAILAETCVEWFIAFQGCFRQSITVVT-IYSSLGEDALIHSLNETQVTTLICDSKQLK 214 (721)
Q Consensus 151 Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vp-l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~ 214 (721)
.+++||.|.=-..||.--.+.+.=|-..|.-.+- +..+-..+++...|++.+++.||++++...
T Consensus 157 ~L~~GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~~ 221 (354)
T KOG0025|consen 157 QLNKGDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEELRD 221 (354)
T ss_pred hcCCCCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHhcc
Confidence 5789999999999998777777778888876664 466778899999999999999999988753
Done!