Query 004977
Match_columns 721
No_of_seqs 470 out of 2620
Neff 9.6
Searched_HMMs 13730
Date Mon Mar 25 11:37:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004977.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/004977hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1pg4a_ e.23.1.1 (A:) Acetyl-C 100.0 9.7E-78 7.1E-82 685.9 44.0 522 84-715 74-618 (643)
2 d1ry2a_ e.23.1.1 (A:) Acetyl-C 100.0 9E-77 6.5E-81 681.4 37.6 538 82-719 59-619 (640)
3 d1v25a_ e.23.1.1 (A:) Long cha 100.0 1.3E-75 9.4E-80 658.2 36.3 507 79-714 8-529 (534)
4 d1lcia_ e.23.1.1 (A:) Lucifera 100.0 2.8E-74 2E-78 648.3 41.5 515 76-715 12-539 (541)
5 d1amua_ e.23.1.1 (A:) Phenylal 100.0 1E-71 7.6E-76 623.2 36.2 487 74-710 15-509 (514)
6 d1mdba_ e.23.1.1 (A:) Dihydrox 100.0 8.7E-70 6.4E-74 610.7 39.6 496 82-717 25-534 (536)
7 d3cw9a1 e.23.1.1 (A:1-503) 4-c 100.0 3.5E-66 2.6E-70 575.7 41.8 489 81-712 1-502 (503)
8 d1yb5a2 c.2.1.1 (A:121-294) Qu 56.5 34 0.0025 28.2 10.2 61 147-210 20-81 (174)
9 d1pg4a_ e.23.1.1 (A:) Acetyl-C 51.7 36 0.0027 35.1 11.6 103 130-234 271-384 (643)
10 d1e3ja2 c.2.1.1 (A:143-312) Ke 51.0 26 0.0019 28.8 8.5 60 147-210 19-78 (170)
11 d1kola2 c.2.1.1 (A:161-355) Fo 50.5 29 0.0021 29.5 8.8 60 147-209 18-77 (195)
12 d1pl8a2 c.2.1.1 (A:146-316) Ke 50.5 48 0.0035 27.1 10.2 63 145-211 17-80 (171)
13 d2ayia1 e.60.1.1 (A:3-408) Ami 49.4 19 0.0014 34.9 8.1 50 137-186 3-56 (406)
14 d1iz0a2 c.2.1.1 (A:99-269) Qui 48.2 21 0.0015 29.6 7.3 64 146-212 19-82 (171)
15 d1uufa2 c.2.1.1 (A:145-312) Hy 48.1 25 0.0018 28.9 7.9 64 145-212 21-84 (168)
16 d1cdoa2 c.2.1.1 (A:165-339) Al 48.1 25 0.0019 29.0 8.0 60 148-210 22-81 (175)
17 d1piwa2 c.2.1.1 (A:153-320) Ci 46.4 33 0.0024 28.2 8.3 64 145-212 18-81 (168)
18 d1llua2 c.2.1.1 (A:144-309) Al 45.8 35 0.0025 27.8 8.4 62 145-210 18-79 (166)
19 d2fzwa2 c.2.1.1 (A:163-338) Al 41.3 34 0.0025 28.1 7.7 60 149-211 23-82 (176)
20 d2jhfa2 c.2.1.1 (A:164-339) Al 40.3 39 0.0029 27.8 7.9 61 148-211 22-82 (176)
21 d1rjwa2 c.2.1.1 (A:138-305) Al 38.9 52 0.0038 26.6 8.5 62 146-211 19-80 (168)
22 d1qora2 c.2.1.1 (A:113-291) Qu 38.8 94 0.0069 25.2 11.0 60 146-209 19-80 (179)
23 d1ry2a_ e.23.1.1 (A:) Acetyl-C 37.8 66 0.0048 32.7 11.0 102 130-233 258-370 (640)
24 d2cvba1 c.47.1.10 (A:2-188) Pr 34.3 9.5 0.00069 32.6 2.6 44 560-605 112-155 (187)
25 d1ofux_ c.37.1.22 (X:) Hypothe 32.7 98 0.0072 23.6 8.8 64 144-207 47-115 (119)
26 d1udxa3 d.242.1.1 (A:341-416) 31.8 11 0.0008 26.8 2.1 31 131-161 36-66 (76)
27 d1e0ca2 c.46.1.2 (A:136-271) S 31.1 33 0.0024 27.2 5.4 46 141-186 74-119 (136)
28 d1gu7a2 c.2.1.1 (A:161-349) 2, 31.0 50 0.0037 27.6 7.1 60 150-210 24-86 (189)
29 d1v3va2 c.2.1.1 (A:113-294) Le 30.8 1.2E+02 0.0084 24.8 9.5 63 146-211 20-83 (182)
30 d2bhsa1 c.79.1.1 (A:2-293) O-a 30.4 92 0.0067 27.9 9.5 67 146-212 50-116 (292)
31 d1o69a_ c.67.1.4 (A:) Aminotra 29.8 32 0.0023 32.5 6.1 45 141-188 47-91 (374)
32 d1h2ba2 c.2.1.1 (A:155-326) Al 29.3 1.3E+02 0.0097 24.1 10.0 58 151-211 29-86 (172)
33 d2cfxa2 d.58.4.2 (A:64-140) Tr 29.0 79 0.0057 21.7 6.7 37 596-633 15-51 (77)
34 d1uara2 c.46.1.2 (A:145-285) S 27.9 37 0.0027 27.1 5.2 45 142-186 76-121 (141)
35 d1f8fa2 c.2.1.1 (A:163-336) Be 27.5 1.2E+02 0.0087 24.5 8.9 61 145-209 19-80 (174)
36 d1vj0a2 c.2.1.1 (A:156-337) Hy 27.1 1.1E+02 0.0077 25.0 8.6 63 145-211 18-82 (182)
37 d1jvba2 c.2.1.1 (A:144-313) Al 27.1 1.4E+02 0.01 23.7 11.1 61 146-210 19-81 (170)
38 d1zjca1 e.60.1.1 (A:3-415) Ami 26.6 69 0.005 30.7 7.9 51 136-186 2-56 (413)
39 d1c4oa2 c.37.1.19 (A:410-583) 26.1 1.2E+02 0.0088 24.9 8.4 78 153-235 29-109 (174)
40 d1s2ma2 c.37.1.19 (A:252-422) 25.3 1.6E+02 0.012 23.6 9.7 90 138-235 18-110 (171)
41 d1mdoa_ c.67.1.4 (A:) Aminotra 25.2 82 0.006 29.2 8.3 64 142-209 58-126 (376)
42 d1jqba2 c.2.1.1 (A:1140-1313) 24.8 1.1E+02 0.0084 24.8 8.2 59 147-209 20-79 (174)
43 d1amua_ e.23.1.1 (A:) Phenylal 24.5 56 0.0041 32.0 7.1 97 273-386 36-134 (514)
44 d1p0fa2 c.2.1.1 (A:1164-1337) 23.8 1.2E+02 0.0088 24.6 8.1 59 147-209 20-79 (174)
45 d1zl0a2 c.23.16.7 (A:3-169) LD 23.5 86 0.0063 25.6 6.8 14 152-165 9-23 (167)
46 d1d1ta2 c.2.1.1 (A:163-338) Al 23.2 1.1E+02 0.008 24.9 7.7 60 147-210 22-82 (176)
47 d1urha2 c.46.1.2 (A:149-268) 3 23.0 49 0.0036 25.0 5.0 44 142-185 69-112 (120)
48 d1rhsa2 c.46.1.2 (A:150-293) R 21.6 52 0.0038 26.2 4.9 45 143-187 79-123 (144)
49 d1b9ha_ c.67.1.4 (A:) 3-amino- 21.3 45 0.0033 31.6 5.3 63 142-208 61-128 (384)
No 1
>d1pg4a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Salmonella enterica [TaxId: 28901]}
Probab=100.00 E-value=9.7e-78 Score=685.90 Aligned_cols=522 Identities=18% Similarity=0.227 Sum_probs=417.3
Q ss_pred HHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcc
Q 004977 84 MAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAE 163 (721)
Q Consensus 84 l~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~ 163 (721)
-..+++++++++||++|+++.. +. .+..+++||+||.++++++|++|+++|+++||+|+|+++
T Consensus 74 ~~n~ldrh~~~~~d~~Ali~~~----------~~-------~~~~~~~TY~eL~~~v~~~A~~L~~~Gv~~Gd~V~i~~~ 136 (643)
T d1pg4a_ 74 AANCLDRHLQENGDRTAIIWEG----------DD-------TSQSKHISYRELHRDVCRFANTLLDLGIKKGDVVAIYMP 136 (643)
T ss_dssp HHHHTGGGHHHHTTSEEEEEEC----------SS-------TTCEEEEEHHHHHHHHHHHHHHHHHHTCCTTCEEEEECC
T ss_pred HHHHHHHHHHhCCCCEEEEEEe----------cC-------CCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecc
Confidence 3567778899999999999742 11 234468999999999999999999999999999999999
Q ss_pred CcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccch---------hHHHhhh--hcCCCccEEEEe
Q 004977 164 TCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQL---------KKLSAVS--SSLKTIKNVIYF 232 (721)
Q Consensus 164 n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~---------~~~~~~~--~~~~~~~~ii~~ 232 (721)
|++++++++|||+++|++++|+++.++++++.++|++++++++|+++... ..+.... ...+.+.+++.+
T Consensus 137 n~~e~iv~~lA~~~~Gav~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~ 216 (643)
T d1pg4a_ 137 MVPEAAVAMLACARIGAVHSVIFGGFSPEAVAGCIIDSSSRLVITADEGVRAGRSIPLKKNVDDALKNPNVTSVEHVIVL 216 (643)
T ss_dssp SSHHHHHHHHHHHHHTCEEEECCTTSCHHHHHHHHHHHTCSEEEEESEEEETTEEEESHHHHHHHHTSTTCCSCCEEEEE
T ss_pred cchHHHHHHHHHHHhCeEEEecCCCCCHHHHHHHHHhcCCCEEEEcchhhhhccccchhhhHHHHHhccccccceEEEEe
Confidence 99999999999999999999999999999999999999999999976432 2222222 245677888887
Q ss_pred cCCCCCccCCccCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHHHHH-HHhhC
Q 004977 233 ENDGSEKDSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAA-IKTLI 311 (721)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~-~~~~~ 311 (721)
....... .. .......+.+..... .....+...+++|+++|+|||||||.||||++||++++..... +...+
T Consensus 217 ~~~~~~~-----~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~dd~a~IlyTSGTTG~PKgV~~sh~~~l~~~~~~~~~~~ 289 (643)
T d1pg4a_ 217 KRTGSDI-----DW-QEGRDLWWRDLIEKA-SPEHQPEAMNAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAATTFKYVF 289 (643)
T ss_dssp CSSCCCC-----CC-CBTTEEEHHHHHTTS-CSCCCCCCEETTSEEEEEEECCSSSSCEEEEEESHHHHHHHHHHHHHHT
T ss_pred ccCCccc-----cc-ccccchhhhhhhccc-CcccCCCCCCCCCeEEEEeCCCcccCCCEEEEccHHHHHHHHHHHHHhh
Confidence 6553321 00 011233444444332 2233345568899999999999999999999999997655444 45556
Q ss_pred CCCCCCcEEEeccChHHHHHHHH-HHHHHHhcceEeeCccccccccchhhccCccCcceeecceEEeechHHHHHHHHHH
Q 004977 312 PNPGRSDVYLAYLPLAHVLELAA-ESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGV 390 (721)
Q Consensus 312 ~~~~~~d~~l~~~pl~h~~g~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~ 390 (721)
.+.++|++++++|++|++++.. ++.+|+.|+++++.+....... +..++..++++++|+++++|++++.|++..
T Consensus 290 -~~~~~d~~~~~~p~~~~~g~~~~l~~~L~~G~t~vl~~~~~~~~~----~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~ 364 (643)
T d1pg4a_ 290 -DYHPGDIYWCTADVGWVTGHSYLLYGPLACGATTLMFEGVPNWPT----PARMCQVVDKHQVNILYTAPTAIRALMAEG 364 (643)
T ss_dssp -TCCTTCEEEECSCTTSHHHHHHTTHHHHHTTCEEEEECSCTTSSS----TTHHHHHHHHHTCSEEEECHHHHHHHHTTG
T ss_pred -CCCCCCEEEEeCChHHHHHHHHHHHHHHHhCCEEEEecCCCCCCC----HHHHHHHHHHHCCcEEEehHHHHHHHHhCc
Confidence 8999999999999999999876 6678999999998432211111 122334499999999999999999987531
Q ss_pred HHHHHhhcchhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHHHHHHHhhC
Q 004977 391 VKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMG 470 (721)
Q Consensus 391 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~~~~~~g 470 (721)
... .+..+.++||.+++||+++++++.+++.+.+|
T Consensus 365 ~~~---------------------------------------------~~~~dl~sLr~i~~~G~pl~~~~~~~~~~~~g 399 (643)
T d1pg4a_ 365 DKA---------------------------------------------IEGTDRSSLRILGSVGEPINPEAWEWYWKKIG 399 (643)
T ss_dssp GGG---------------------------------------------TTTCCCTTCCEEEEESSCCCHHHHHHHHHHTT
T ss_pred chh---------------------------------------------ccccCCCceEEEEEEeCCCCHHHHHHHHHHhC
Confidence 110 11123368999999999999999999988874
Q ss_pred ---CccccccccccccccccccCCC--CCCCCccCCCcCcceEEEEecCCCCcccCCCCCCcceEEEcc--ccccccccC
Q 004977 471 ---APIGQAYGLTETCAGSTFSEWD--DPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGG--FNVTAGYFN 543 (721)
Q Consensus 471 ---~~l~~~YG~TE~~~~~~~~~~~--~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g--~~v~~gY~~ 543 (721)
+++++.||+||+++.++...+. ..+.+++|+|+||++++|+| ++|..+ ++|+.|||+|+| |+++.|||+
T Consensus 400 ~~~~~i~~~yG~TE~g~~~~~~~~~~~~~~~gs~G~p~~g~~v~ivd-~~g~~~---~~g~~Gel~v~~~~p~~~~~~~~ 475 (643)
T d1pg4a_ 400 KEKCPVVDTWWQTETGGFMITPLPGAIELKAGSATRPFFGVQPALVD-NEGHPQ---EGATEGNLVITDSWPGQARTLFG 475 (643)
T ss_dssp TTCSCEEEEBCCGGGSSCSBCCCTTTCCBCTTCCBSBCTTCCEEEEC-TTCCBC---CSSEEEEEEECSCCTTCCCEETT
T ss_pred CCCceEEEeechhhccceEEecCCCccCCCCCccccccCCCEEEEEC-CCCCCC---CCCceEEEEEecCCCcccccccC
Confidence 6799999999999877655443 33568999999999999999 667654 478999999999 578999999
Q ss_pred CCcccccccccCCCCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcccceEEEEecCCC---
Q 004977 544 NPGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYVDNIMIHADPFH--- 620 (721)
Q Consensus 544 ~~~~t~~~f~~~~~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~--- 620 (721)
+++.+.+.+....+ |||+|||+|++|+||+|+|+||+||+||+ +|++|+|.|||++|.+||.|.+|+|+|.+++
T Consensus 476 ~~~~~~~~~~~~~~--g~~~TGDl~~~d~dG~l~i~GR~dd~ik~-~G~ri~p~eIE~~l~~~p~V~eaaVvg~~d~~~g 552 (643)
T d1pg4a_ 476 DHERFEQTYFSTFK--NMYFSGDGARRDEDGYYWITGRVDDVLNV-SGHRLGTAEIESALVAHPKIAEAAVVGIPHAIKG 552 (643)
T ss_dssp CHHHHHHHHHSSST--TSEEEEEEEEECTTSCEEEEEESSSEEEE-TTEEEEHHHHHHHHHHSTTEEEEEEEEEEETTTE
T ss_pred ChhhchhhhcccCC--CeEEcCCEEEECCCceEEEecccccEEEE-CCEEECHHHHHHHHHhCCCcceEEEEEEECCCCC
Confidence 99988887753234 89999999999999999999999999997 5999999999999999999999999998765
Q ss_pred ceEEEEEEcChHHHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCCCCCCCCccCcc
Q 004977 621 NYCVALVVPSHKALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEPWTPEAGLVTAA 700 (721)
Q Consensus 621 ~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~~~p~~~~~t~~ 700 (721)
+.++|||+++++. ..+ .++.++|+++++ ++|++|++|+.|++++++ | +|++
T Consensus 553 e~~~a~Vv~~~~~----------~~~------------~~~~~~i~~~~~-~~L~~~~vP~~i~~v~~l--P----~T~s 603 (643)
T d1pg4a_ 553 QAIYAYVTLNHGE----------EPS------------PELYAEVRNWVR-KEIGPLATPDVLHWTDSL--P----KTRS 603 (643)
T ss_dssp EEEEEEEEECTTC----------CCC------------HHHHHHHHHHHH-HHTCGGGCCSEEEECSCC--C----BCTT
T ss_pred eEEEEEEEECCCC----------CCC------------HHHHHHHHHHHH-hhCCcccCccEEEEECCC--C----CCCC
Confidence 3699999988642 111 234467888998 899999999999999998 6 9999
Q ss_pred cccChHHHHHHHHHH
Q 004977 701 LKIKREQLKAKFKDD 715 (721)
Q Consensus 701 gKi~R~~l~~~~~~~ 715 (721)
|||+|++|++++..+
T Consensus 604 GKi~R~~Lr~~~~~~ 618 (643)
T d1pg4a_ 604 GKIMRRILRKIAAGD 618 (643)
T ss_dssp SCBCHHHHHHHHHTC
T ss_pred cCccHHHHHHHhcCC
Confidence 999999999998754
No 2
>d1ry2a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=9e-77 Score=681.37 Aligned_cols=538 Identities=17% Similarity=0.187 Sum_probs=413.3
Q ss_pred CCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHH-hCCCCCCCEEEE
Q 004977 82 STMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLV-NFGHNVDTRAAI 160 (721)
Q Consensus 82 ~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~-~~Gv~~gd~V~i 160 (721)
+..+.+|+++|+++||++|+++.. +. .+..+++||+||.++++++|++|+ ++|+++||+|+|
T Consensus 59 N~~~n~ldr~a~~~pd~~Ali~~~----------~~-------~g~~~~~Ty~eL~~~v~~~A~~L~~~~Gv~~Gd~V~i 121 (640)
T d1ry2a_ 59 NACYNCVDRHALKTPNKKAIIFEG----------DE-------PGQGYSITYKELLEEVCQVAQVLTYSMGVRKGDTVAV 121 (640)
T ss_dssp CHHHHHTHHHHTTCTTSEEEEEEC----------SS-------TTCCEEEEHHHHHHHHHHHHHHHHHTSCCCTTCEEEE
T ss_pred hHHHHHHHHHHhhCCCCEEEEEEe----------cC-------CCCeeEEeHHHHHHHHHHHHHHHHHhcCCCCCCEEEE
Confidence 345888999999999999999742 11 244568999999999999999997 679999999999
Q ss_pred EccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccc---------hhHHHhhhhcCCCccEEEE
Q 004977 161 LAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQ---------LKKLSAVSSSLKTIKNVIY 231 (721)
Q Consensus 161 ~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~---------~~~~~~~~~~~~~~~~ii~ 231 (721)
+++|++++++++|||+++|++++|+++.++++++.++++++++++++++... ...+.......+.+.....
T Consensus 122 ~~~n~~e~~~~~lA~~~~Gav~vpi~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (640)
T d1ry2a_ 122 YMPMVPEAIITLLAISRIGAIHSVVFAGFSSNSLRDRINDGDSKVVITTDESNRGGKVIETKRIVDDALRETPGVRHVLV 201 (640)
T ss_dssp CCCSSHHHHHHHHHHHHTTCEEEECCTTSCHHHHHHHHHHHTCSEEEEESBCCBTTBCCBHHHHHHHHTTSCTTCCEEEE
T ss_pred EeCCCHHHHHHHHHhccCceEeecCCCCCCHHHHHHHHHhhhccccccchhhhhccchhhhHHHHHhhhhhhcccceeee
Confidence 9999999999999999999999999999999999999999999999998643 2334444455566666655
Q ss_pred ecCCCCCccCCccCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHHHHHHHh-h
Q 004977 232 FENDGSEKDSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKT-L 310 (721)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~-~ 310 (721)
........ ... .......+..... .........+..++|+++|+|||||||.||||+++|++++........ .
T Consensus 202 ~~~~~~~~----~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~~h~~~~~~~~~~~~~~ 275 (640)
T d1ry2a_ 202 YRKTNNPS----VAF-HAPRDLDWATEKK-KYKTYYPCTPVDSEDPLFLLYTSGSTGAPKGVQHSTAGYLLGALLTMRYT 275 (640)
T ss_dssp ECSSCCSS----CCC-CSSSEEEHHHHHT-TSCSCCCCCCEETTSCCEEEEECCSSSSCEEEEECSHHHHHHHHHHHHHH
T ss_pred eccccccc----ccc-ccccccccccccc-ccccccccCCcccccCCEEEECCCCCCCCcceeeccccHHHHHHHHHHhh
Confidence 54432211 000 0111222222222 222233345567899999999999999999999999998877655554 4
Q ss_pred CCCCCCCcEEEeccChHHHHHHHH-HHHHHHhcceEeeCccccccccchhhccCccCcceeecceEEeechHHHHHHHHH
Q 004977 311 IPNPGRSDVYLAYLPLAHVLELAA-ESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREG 389 (721)
Q Consensus 311 ~~~~~~~d~~l~~~pl~h~~g~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~ 389 (721)
+ .+.++|++++++|++|+++... ++.+|..|+++++.+....... ...++..++++++|++.++|++++.|.+.
T Consensus 276 ~-~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~----~~~~~~~i~~~~vt~~~~~P~~~~~l~~~ 350 (640)
T d1ry2a_ 276 F-DTHQEDVFFTAGDIGWITGHTYVVYGPLLYGCATLVFEGTPAYPN----YSRYWDIIDEHKVTQFYVAPTALRLLKRA 350 (640)
T ss_dssp S-CCCSSCEEEECSCTTSHHHHHHTTHHHHHHTSEEEEECSCTTSSC----TTHHHHHHHHTTCSEEEECHHHHHHHTTS
T ss_pred c-CCCcccceeeccchhhhhhHHHHHHHHHHhCCEEEEecCCCCCCC----HHHHHHHHHHhCccEEEcChHHHHHHHhc
Confidence 5 8899999999999999999765 6678999998887432221111 12233349999999999999999987542
Q ss_pred HHHHHHhhcchhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHHHHHHHhh
Q 004977 390 VVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICM 469 (721)
Q Consensus 390 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~~~~~~ 469 (721)
... ......+++||.+++||+++++++.+++.+.+
T Consensus 351 ~~~---------------------------------------------~~~~~~l~sLr~v~~gG~~l~~~~~~~~~~~~ 385 (640)
T d1ry2a_ 351 GDS---------------------------------------------YIENHSLKSLRCLGSVGEPIAAEVWEWYSEKI 385 (640)
T ss_dssp CTT---------------------------------------------SSSSCCCTTCCEEEECSSCCCHHHHHHHHHTT
T ss_pred ccc---------------------------------------------ccccCCCCceEEEEEecccCcHHHHHHHHHhc
Confidence 110 00111236899999999999999999999988
Q ss_pred C---CccccccccccccccccccCCC---CCCCCccCCCcCcceEEEEecCCCCcccCCCCCCcceEEEcc--ccccccc
Q 004977 470 G---APIGQAYGLTETCAGSTFSEWD---DPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGG--FNVTAGY 541 (721)
Q Consensus 470 g---~~l~~~YG~TE~~~~~~~~~~~---~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g--~~v~~gY 541 (721)
| ..++++||+||++......... ..+.+++|+|+||++++|+|++++.... +.+..|||+++| |+++.||
T Consensus 386 g~~~~~i~~~yg~te~~~~~~~~~~~~~~~~~~gs~G~p~~g~~~~i~d~~~~~~~~--~~~~~Gel~i~~~~p~~~~gy 463 (640)
T d1ry2a_ 386 GKNEIPIVDTYWQTESGSHLVTPLAGGVTPMKPGSASFPFFGIDAVVLDPNTGEELN--TSHAEGVLAVKAAWPSFARTI 463 (640)
T ss_dssp SCSSSCEEECBCCTTTCSCSEECCTTTCCCCCTTCCCEECTTCCEEEECSSSTTCEE--CSSCEEEEEESSCCTTSCCEE
T ss_pred CCCcceEEeeecccccccccccccCCCcCCCCCcccccccCCceEEEEeCCCCcccC--CCCceEEEEEEecCCCccccc
Confidence 6 4689999999998776554433 2356899999999999999955444332 345679999998 6899999
Q ss_pred cCCCcccccccccCCCCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcccceEEEEecCCC-
Q 004977 542 FNNPGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYVDNIMIHADPFH- 620 (721)
Q Consensus 542 ~~~~~~t~~~f~~~~~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~- 620 (721)
|+|++.|.+.|..+.+ |||+|||+|++|+||+|+|+||+||+||+ +|++|+|.|||++|.+||+|.+|+|+|.+++
T Consensus 464 ~~~~e~t~~~~~~~~~--gw~~TGDlg~~d~dG~l~i~GR~dd~Ik~-~G~~I~p~eIE~~l~~~p~V~~a~Vvg~~d~~ 540 (640)
T d1ry2a_ 464 WKNHDRYLDTYLNPYP--GYYFTGDGAAKDKDGYIWILGRVDDVVNV-SGHRLSTAEIEAAIIEDPIVAECAVVGFNDDL 540 (640)
T ss_dssp TTCHHHHHHHHTSSST--TSEEEEEEEEECTTCCEEECSCTTSCBCS-SSCCBCHHHHHHHHHSSTTEEEEEEECCCCCT
T ss_pred ccCHHHHHhhhccCCC--CeEEcCCceeECCCCCEEEEEcCCCEEEE-CCEEECHHHHHHHHHhCCCccEEEEEEEECCC
Confidence 9999999999863334 99999999999999999999999999996 6999999999999999999999999998875
Q ss_pred --ceEEEEEEcChHHHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCCCCCCCCccC
Q 004977 621 --NYCVALVVPSHKALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEPWTPEAGLVT 698 (721)
Q Consensus 621 --~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~~~p~~~~~t 698 (721)
+.++|+|++.++.....+ ..+..+++.++|+++++ ++|++|++|+.|++++++ | +|
T Consensus 541 ~ge~~~a~Vv~~~~~~~~~~---------------~~~~~~~l~~~l~~~~~-~~L~~~~~P~~i~~v~~l--P----~T 598 (640)
T d1ry2a_ 541 TGQAVAAFVVLKNKSSWSTA---------------TDDELQDIKKHLVFTVR-KDIGPFAAPKLIILVDDL--P----KT 598 (640)
T ss_dssp TSCCCEEEEEEC---------------------------CCSHHHHHHHHHH-HHTCTTTSCSEEEECSCC--C----BC
T ss_pred CCeEEEEEEEEcCCCCcccc---------------chHHHHHHHHHHHHHHH-hhCCCCCCceEEEEeCCC--C----CC
Confidence 359999999876421100 01112335578888888 899999999999999998 6 99
Q ss_pred cccccChHHHHHHHHHHHHhh
Q 004977 699 AALKIKREQLKAKFKDDLQML 719 (721)
Q Consensus 699 ~~gKi~R~~l~~~~~~~i~~~ 719 (721)
++|||+|++||+++..+.+++
T Consensus 599 ~sGKi~R~~Lr~~~~~~~~~~ 619 (640)
T d1ry2a_ 599 RSGKIMRRILRKILAGESDQL 619 (640)
T ss_dssp TTSCBCHHHHHHSCC------
T ss_pred CCcCccHHHHHHHHhCCcccc
Confidence 999999999999988766554
No 3
>d1v25a_ e.23.1.1 (A:) Long chain fatty acid-CoA ligase TT0168 {Thermus thermophilus [TaxId: 274]}
Probab=100.00 E-value=1.3e-75 Score=658.19 Aligned_cols=507 Identities=23% Similarity=0.320 Sum_probs=385.9
Q ss_pred CCCCCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCCCEE
Q 004977 79 KGASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRA 158 (721)
Q Consensus 79 ~~~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V 158 (721)
+...||+++|+++|+++||++|+++.+ + ++++++||+||.++++++|++|.++|+++||+|
T Consensus 8 ~~~~~l~~~l~~~a~~~pd~~av~~~~----------~---------g~~~~~Ty~el~~~~~~~A~~L~~~Gv~~gd~V 68 (534)
T d1v25a_ 8 DEELNLWDFLERAAALFGRKEVVSRLH----------T---------GEVHRTTYAEVYQRARRLMGGLRALGVGVGDRV 68 (534)
T ss_dssp CCCCCTHHHHHHHHHHSTTCEEEEECT----------T---------SCEEEEEHHHHHHHHHHHHHHHHHTTCCTTCEE
T ss_pred CCCCCHHHHHHHHHHHcCCCeEEEEec----------C---------CceEEEcHHHHHHHHHHHHHHHHHCCcCCCCEE
Confidence 445689999999999999999998752 3 334679999999999999999999999999999
Q ss_pred EEEccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccchhHHHhhhhcCCCccEEEEecCCCCC
Q 004977 159 AILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSE 238 (721)
Q Consensus 159 ~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~ 238 (721)
+|+++|+++|++++|||+++|++++|++|.++.+++.++|+++++++++++.........+...++.++.++........
T Consensus 69 ~i~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (534)
T d1v25a_ 69 ATLGFNHFRHLEAYFAVPGMGAVLHTANPRLSPKEIAYILNHAEDKVLLFDPNLLPLVEAIRGELKTVQHFVVMDEKAPE 148 (534)
T ss_dssp EEECCSSHHHHHHHHHHHHTTCEEEECCTTSCHHHHHHHHHHHTCSEEEECGGGHHHHHHHGGGCSSCCEEEESSSCCCT
T ss_pred EEEeCCCHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHHhhccccccccchhhhhHHHHhhcccccceeEEeeccccc
Confidence 99999999999999999999999999999999999999999999999999999999988888888888888875544321
Q ss_pred ccCCccCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHHHHHHHhhC-CCCCCC
Q 004977 239 KDSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLI-PNPGRS 317 (721)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~-~~~~~~ 317 (721)
. ....... ...........++++++|+|||||||.||||+++|++++.......... ......
T Consensus 149 ~------------~~~~~~~----~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~ 212 (534)
T d1v25a_ 149 G------------YLAYEEA----LGEEADPVRVPERAACGMAYTTGTTGLPKGVVYSHRALVLHSLAASLVDGTALSEK 212 (534)
T ss_dssp T------------CEEHHHH----CCSCCCCCCCCTTSEEEEEEECSSSSSCEEEEEEHHHHHHHHHHTTSTTTTCCCTT
T ss_pred c------------ccccccc----ccccccccccccCCcEEEEEecCCCCCccccccccchhhhhhhhhhhhcccccccc
Confidence 1 1111111 1112223456788999999999999999999999999987665543332 266789
Q ss_pred cEEEeccChHHHHHHHHHHHHHHhcceEeeCccccccccchhhccCccCcceeecceEEeechHHHHHHHHHHHHHHHhh
Q 004977 318 DVYLAYLPLAHVLELAAESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEK 397 (721)
Q Consensus 318 d~~l~~~pl~h~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~ 397 (721)
|++++.+|++|.+++...+..+..|+++++..+..... .+...+.++++|++.++|+++..+.......
T Consensus 213 d~~~~~~p~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~-------~~~~~~~~~~vt~~~~~p~~~~~~~~~~~~~---- 281 (534)
T d1v25a_ 213 DVVLPVVPMFHVNAWCLPYAATLVGAKQVLPGPRLDPA-------SLVELFDGEGVTFTAGVPTVWLALADYLEST---- 281 (534)
T ss_dssp CEEEECSCTTSHHHHTHHHHHHHHTCEEEECTTCCSHH-------HHHHHHHHTTCCEEEECHHHHHHHHHHHHHH----
T ss_pred cccccccchhhhccccccceeeeecceeeecccccccc-------ccchhhhhccccccccCchhhhhhhhhhccc----
Confidence 99999999999999988888888888877743321111 1222388999999999999999887643211
Q ss_pred cchhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHHHHHHHhhCCcccccc
Q 004977 398 GGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMGAPIGQAY 477 (721)
Q Consensus 398 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~~~~~~g~~l~~~Y 477 (721)
....++||.+++||++++++..+++++ +|.+++++|
T Consensus 282 -------------------------------------------~~~~~~lr~~~~gG~~~~~~~~~~~~~-~~~~i~~~y 317 (534)
T d1v25a_ 282 -------------------------------------------GHRLKTLRRLVVGGSAAPRSLIARFER-MGVEVRQGY 317 (534)
T ss_dssp -------------------------------------------TCCCSSCCEEEECSSCCCHHHHHHHHH-TTCEEEEEE
T ss_pred -------------------------------------------cccccceeEEEEecCCCCHHHHHHHHH-hCCeeeeec
Confidence 112368999999999999999999885 589999999
Q ss_pred ccccccccccccCCCCC-----------CCCccCCCcCcceEEEEecCCCCcccCCCCCCcceEEEccccccccccCCCc
Q 004977 478 GLTETCAGSTFSEWDDP-----------SVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPG 546 (721)
Q Consensus 478 G~TE~~~~~~~~~~~~~-----------~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~ 546 (721)
|+||++..++....... ..+++|+|+||++++|+| ++++.++ .+.++.|||+|+|++++.|||++++
T Consensus 318 G~te~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~g~~~~i~d-~~~~~~~-~~~~~~Gel~v~g~~v~~gY~~~~~ 395 (534)
T d1v25a_ 318 GLTETSPVVVQNFVKSHLESLSEEEKLTLKAKTGLPIPLVRLRVAD-EEGRPVP-KDGKALGEVQLKGPWITGGYYGNEE 395 (534)
T ss_dssp ECGGGSSEEEECCCCGGGTTSCHHHHHHHHTSCBEECTTCEEEEEC-TTSCBCC-SSSCCCEEEEEESTTSBSSCBTCHH
T ss_pred cccccccceeecccCccccccCccccccccccceeccCCcEEEEEC-CCCCCCC-CCCCeeEEEEEcCCcccceecCChh
Confidence 99999988765433211 236899999999999999 6677665 4457899999999999999999999
Q ss_pred ccccccccCCCCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcccceEEEEecCCCc---eE
Q 004977 547 KTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYVDNIMIHADPFHN---YC 623 (721)
Q Consensus 547 ~t~~~f~~~~~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~~---~~ 623 (721)
.|.+.|. .| |||+|||+|++|+||+|+++||+||+||+ +|++|+|.|||++|.+||+|.+|+|++.+++. .+
T Consensus 396 ~t~~~~~--~d--g~~~TGDlg~~~~~G~l~~~GR~~~~i~~-~G~~v~~~eIE~~l~~~~~V~~a~v~~~~~~~~~~~l 470 (534)
T d1v25a_ 396 ATRSALT--PD--GFFRTGDIAVWDEEGYVEIKDRLKDLIKS-GGEWISSVDLENALMGHPKVKEAAVVAIPHPKWQERP 470 (534)
T ss_dssp HHHTTBC--TT--SCEEEEEEEEECTTCCEEEEEESSCEEEE-TTEEEEHHHHHCC----------CEEEEECSSSSEEE
T ss_pred hhhhhcc--cC--CCCccCceeEECCCccEEEecccccEEEE-CCEEECHHHHHHHHHhCCCcceEEEEEEECCCCCeEE
Confidence 9999986 66 89999999999999999999999999997 69999999999999999999999999987653 58
Q ss_pred EEEEEcChHHHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCCCCCCCCccCccccc
Q 004977 624 VALVVPSHKALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEPWTPEAGLVTAALKI 703 (721)
Q Consensus 624 ~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~~~p~~~~~t~~gKi 703 (721)
+|+|+++.+... ..+.++.+++ .+||+|++|+.|++++++ | +|++|||
T Consensus 471 ~a~vv~~~~~~~-------------------------~~~~~~~~~~-~~l~~~~~P~~i~~~~~l--P----~t~~GKi 518 (534)
T d1v25a_ 471 LAVVVPRGEKPT-------------------------PEELNEHLLK-AGFAKWQLPDAYVFAEEI--P----RTSAGKF 518 (534)
T ss_dssp EECC---------------------------------------------CCCTTTSCSBC--------------------
T ss_pred EEEEEeCCCCCC-------------------------HHHHHHHHHH-hcCCcCCCccEEEEECCC--C----CCCCccc
Confidence 899888654311 0122334466 899999999999999987 6 9999999
Q ss_pred ChHHHHHHHHH
Q 004977 704 KREQLKAKFKD 714 (721)
Q Consensus 704 ~R~~l~~~~~~ 714 (721)
+|++||++|++
T Consensus 519 ~R~~lr~~~~~ 529 (534)
T d1v25a_ 519 LKRALREQYKN 529 (534)
T ss_dssp CCTTHHHHSTT
T ss_pred cHHHHHHHHHh
Confidence 99999988854
No 4
>d1lcia_ e.23.1.1 (A:) Luciferase {Firefly (Photinus pyralis) [TaxId: 7054]}
Probab=100.00 E-value=2.8e-74 Score=648.29 Aligned_cols=515 Identities=22% Similarity=0.284 Sum_probs=403.9
Q ss_pred ccCCCCCCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCC
Q 004977 76 VPWKGASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVD 155 (721)
Q Consensus 76 ~~~~~~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~g 155 (721)
.|++ ..|+.++|.+++++|+++|+.+.-. |+. ..+++||+||.+++.++|++|+++|+++|
T Consensus 12 ~p~~-~~t~~~~l~~~~~~~~~~P~~~a~~----------d~~--------~~~~lTy~el~~~~~~lA~~L~~~Gi~~G 72 (541)
T d1lcia_ 12 YPLE-DGTAGEQLHKAMKRYALVPGTIAFT----------DAH--------IEVNITYAEYFEMSVRLAEAMKRYGLNTN 72 (541)
T ss_dssp SCCC-SSCHHHHHHHHHHHHHTSTTCEEEE----------ETT--------TCCEEEHHHHHHHHHHHHHHHHHHTCCTT
T ss_pred CCCC-CCCHHHHHHHHHHhhCCCCCeEEEE----------eCC--------CCeEeeHHHHHHHHHHHHHHHHHcCcCCC
Confidence 4444 3699999999999995555433211 211 11369999999999999999999999999
Q ss_pred CEEEEEccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccchhHHHhhhhcCCCccEEEEecCC
Q 004977 156 TRAAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFEND 235 (721)
Q Consensus 156 d~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~ii~~~~~ 235 (721)
|+|+|+++|+++|++++|||+++|++++|+++.++.+++.++|++++++++|++++..+.+.++...++.++.++.++..
T Consensus 73 d~Vai~~~ns~e~~v~~lA~~~~G~i~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (541)
T d1lcia_ 73 HRIVVCSENSLQFFMPVLGALFIGVAVAPANDIYNERELLNSMNISQPTVVFVSKKGLQKILNVQKKLPIIQKIIIMDSK 152 (541)
T ss_dssp CEEEEECSSCSSTHHHHHHHHHHTCEEEECCTTCCHHHHHHHHHHHCCSEEEECGGGHHHHHHHHHHCTTCCEEEETTCS
T ss_pred CEEEEEeCCCHHHHHHHHHHHHhCeEEEecCCCCCHHHHHHHHHhccceEEeeeccccccchhccccccccceeeeecCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999987754
Q ss_pred CCCccCCccCCCCCceEeeHHHHHhcCC------CCCCCCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHHHHHHHh
Q 004977 236 GSEKDSGVSGGISNWTVSSFSEVEKLGK------RSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKT 309 (721)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~ 309 (721)
.... ...++.+...... ....+.....++++|+|+|||||||.||||++||++++........
T Consensus 153 ~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~ 221 (541)
T d1lcia_ 153 TDYQ-----------GFQSMYTFVTSHLPPGFNEYDFVPESFDRDKTIALIMNSSGSTGLPKGVALPHRTACVRFSHARD 221 (541)
T ss_dssp SCBT-----------TBEEHHHHHHHHSCTTCCTTTCCCCCCCTTTSEEEEEEC-----CCCEEEEEHHHHHHHHHHHTC
T ss_pred cccc-----------ccchhhhhhhhhccccccccccCccccCCCCceEEEEeeccccccccccccccchhhhhhhhhhh
Confidence 3221 1223333322111 1112234456789999999999999999999999999988777655
Q ss_pred hC--CCCCCCcEEEeccChHHHHHHHHHHHHHHhcceEeeCccccccccchhhccCccCcceeecceEEeechHHHHHHH
Q 004977 310 LI--PNPGRSDVYLAYLPLAHVLELAAESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVR 387 (721)
Q Consensus 310 ~~--~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~ 387 (721)
.. ..+.+++++++.+|++|.+++...+..+..|+.++.......... ...+..+++|.++++|.++..+.
T Consensus 222 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~t~~~~~p~~~~~~~ 293 (541)
T d1lcia_ 222 PIFGNQIIPDTAILSVVPFHHGFGMFTTLGYLICGFRVVLMYRFEEELF--------LRSLQDYKIQSALLVPTLFSFFA 293 (541)
T ss_dssp TTTSCCCCTTCEEEECSCTTSHHHHHHHHHHHHHTCEEEECSSCCHHHH--------HHHHHHTTCSEEECCHHHHHHHH
T ss_pred hcccccccccccccccccccccccccccccccccccccccccccccchh--------HHHHhhhhccccccCcccccccc
Confidence 43 256789999999999999999888888888888776332222111 11278899999999999999886
Q ss_pred HHHHHHHHhhcchhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHHHHHHH
Q 004977 388 EGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINI 467 (721)
Q Consensus 388 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~~~~ 467 (721)
..... .....+++|.+++||++++++..+++.+
T Consensus 294 ~~~~~-----------------------------------------------~~~~~~~l~~v~~gG~~~~~~~~~~~~~ 326 (541)
T d1lcia_ 294 KSTLI-----------------------------------------------DKYDLSNLHEIASGGAPLSKEVGEAVAK 326 (541)
T ss_dssp HCSCG-----------------------------------------------GGSCCTTCCEEECTTCCCCHHHHHHHHH
T ss_pred ccccc-----------------------------------------------cccccccceEEEeccccccccccccccc
Confidence 52110 1112358999999999999999998888
Q ss_pred hhCC-ccccccccccccccccccCCCCCCCCccCCCcCcceEEEEecCCCCcccCCCCCCcceEEEccccccccccCCCc
Q 004977 468 CMGA-PIGQAYGLTETCAGSTFSEWDDPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPG 546 (721)
Q Consensus 468 ~~g~-~l~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~ 546 (721)
.++. .++++||+||++..++.........+++|+|+||++++|+|+|++..+ ++|+.|||+|+|++++.||+++++
T Consensus 327 ~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~svG~p~~~~~~~i~d~d~~~~~---~~g~~Gel~v~g~~~~~gY~~~~~ 403 (541)
T d1lcia_ 327 RFHLPGIRQGYGLTETTSAILITPEGDDKPGAVGKVVPFFEAKVVDLDTGKTL---GVNQRGELCVRGPMIMSGYVNNPE 403 (541)
T ss_dssp HTTCSCCBCEECCGGGSSCSEECCCC---CCCCBEECTTCEEEEECTTTCCBC---CTTCCEEEEEESTTSCSEETTBHH
T ss_pred ccCCceeeecCCccccCceEEecCcccCCCCccccccCCCEEEEEECCCCcCC---CCCCeEEEEEccCccCCeeCCChh
Confidence 8864 689999999999988887777777899999999999999997777654 488999999999999999999999
Q ss_pred ccccccccCCCCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcccceEEEEecCCC---ceE
Q 004977 547 KTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYVDNIMIHADPFH---NYC 623 (721)
Q Consensus 547 ~t~~~f~~~~~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~ 623 (721)
.+...+. .+ |||+|||+|++|+||+++++||.||+||+ +|++|+|.+||++|.+||+|.+|+|++.+++ +.+
T Consensus 404 ~~~~~~~--~~--~~~~TGDl~~~~~~G~~~~~GR~~d~i~~-~G~~v~~~~IE~~l~~~p~V~~~~v~~~~~~~~g~~~ 478 (541)
T d1lcia_ 404 ATNALID--KD--GWLHSGDIAYWDEDEHFFIVDRLKSLIKY-KGYQVAPAELESILLQHPNIFDAGVAGLPDDDAGELP 478 (541)
T ss_dssp HHHHHBC--TT--SCEEEEEEEEECTTCCEEEC-----CEEE-TTEEECHHHHHHHHHTSTTEEEEEEEEEEETTTEEEE
T ss_pred hhhhccc--CC--ccccCCCeeEEcCCeEEEEeeeecCEEEE-CCEEECHHHHHHHHHhCCCccEEEEEEEECCCCCEEE
Confidence 8888875 56 89999999999999999999999999998 5999999999999999999999999997654 358
Q ss_pred EEEEEcChHHHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCc-ccccEEEeeCCCCCCCCCccCcccc
Q 004977 624 VALVVPSHKALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKF-EIPAKIKLMPEPWTPEAGLVTAALK 702 (721)
Q Consensus 624 ~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~-~~P~~i~~~~~~~~p~~~~~t~~gK 702 (721)
+|+|++.++. +.+ .++|+++++ ++|+++ ++|+.|++++++ | +|++||
T Consensus 479 ~a~v~~~~~~----------~~~---------------~~~l~~~~~-~~l~~~~~~p~~i~~v~~l--P----~t~~GK 526 (541)
T d1lcia_ 479 AAVVVLEHGK----------TMT---------------EKEIVDYVA-SQVTTAKKLRGGVVFVDEV--P----KGLTGK 526 (541)
T ss_dssp EEEEEECTTC----------CCC---------------HHHHHHHHH-HHSCGGGSCTTEEEEESSC--C----C-----
T ss_pred EEEEEECCCC----------CCC---------------HHHHHHHHH-HhCCccccCCcEEEEeCCC--C----cCCCcC
Confidence 8999987542 111 256778887 677766 579999999987 6 999999
Q ss_pred cChHHHHHHHHHH
Q 004977 703 IKREQLKAKFKDD 715 (721)
Q Consensus 703 i~R~~l~~~~~~~ 715 (721)
|+|++|++++.++
T Consensus 527 i~r~~l~~~~~~~ 539 (541)
T d1lcia_ 527 LDARKIREILIKA 539 (541)
T ss_dssp CCHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHh
Confidence 9999999998764
No 5
>d1amua_ e.23.1.1 (A:) Phenylalanine activating domain of gramicidin synthetase 1 {Bacillus brevis [TaxId: 1393]}
Probab=100.00 E-value=1e-71 Score=623.23 Aligned_cols=487 Identities=21% Similarity=0.275 Sum_probs=398.6
Q ss_pred ccccCCCCCCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhCCCC
Q 004977 74 VEVPWKGASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHN 153 (721)
Q Consensus 74 ~~~~~~~~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~ 153 (721)
...++|...||.++|+++|+++||++|+++ +++ .+||+||.++++++|++|+++|++
T Consensus 15 ~~~~~~~~~tl~~l~~~~a~~~Pd~~Al~~------------~~~-----------~~Ty~eL~~~v~~lA~~L~~~Gv~ 71 (514)
T d1amua_ 15 TKAEYPRDKTIHQLFEEQVSKRPNNVAIVC------------ENE-----------QLTYHELNVKANQLARIFIEKGIG 71 (514)
T ss_dssp CCCCCCTTCCHHHHHHHHHHHCTTSEEEEE------------TTE-----------EEEHHHHHHHHHHHHHHHHHTTCC
T ss_pred CCCCCCCCCcHHHHHHHHHHhCCCCeEEEE------------CCe-----------eEcHHHHHHHHHHHHHHHHHcCcC
Confidence 467788889999999999999999999986 444 799999999999999999999999
Q ss_pred CCCEEEEEccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccchhHHHhhhhcCCCccEEEEec
Q 004977 154 VDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFE 233 (721)
Q Consensus 154 ~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~ii~~~ 233 (721)
+||+|+|+++|+++|++++|||+++|++++|+++.++.+++.+++++++++++|++....+.+..... ... .....
T Consensus 72 ~gd~Vai~~~n~~~~v~~~la~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~---~~~-~~~~~ 147 (514)
T d1amua_ 72 KDTLVGIMMEKSIDLFIGILAVLKAGGAYVPIDIEYPKERIQYILDDSQARMLLTQKHLVHLIHNIQF---NGQ-VEIFE 147 (514)
T ss_dssp TTCEEEEECCSSHHHHHHHHHHHHTTCEEEECCTTSCHHHHHHHHHHHTCSEEEECGGGHHHHTTSCC---CSE-EEECC
T ss_pred CcCEEEEEeCCCHHHHHHHHHHHHhCcEEEEeCCCCCHHHHHHHHhccCCcEEEEehhhhhhhhhhcc---ccc-ccccc
Confidence 99999999999999999999999999999999999999999999999999999999887665543221 111 11111
Q ss_pred CCCCCccCCccCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHHHHHHHhhCCC
Q 004977 234 NDGSEKDSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPN 313 (721)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~ 313 (721)
.. ............+..++|+|+|+|||||||.||+|++||+++..........+ .
T Consensus 148 ~~-----------------------~~~~~~~~~~~~p~~~~d~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~-~ 203 (514)
T d1amua_ 148 ED-----------------------TIKIREGTNLHVPSKSTDLAYVIYTSGTTGNPKGTMLEHKGISNLKVFFENSL-N 203 (514)
T ss_dssp CS-----------------------TTTTSCCSCCCCCCCTTSEEEEEEEC-----CEEEEEESHHHHHHHHHHHHTS-C
T ss_pred cc-----------------------cccccccccCCCCCCcccceEEEEccCCCCCcccccccccccccccccccccc-c
Confidence 00 00111122223455789999999999999999999999999999999999888 9
Q ss_pred CCCCcEEEeccChHHHHHHHHHHHHHHhcceEeeCccccccccchhhccCccCcceeecceEEeechHHHHHHHHHHHHH
Q 004977 314 PGRSDVYLAYLPLAHVLELAAESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKK 393 (721)
Q Consensus 314 ~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~ 393 (721)
...+|++++.+|++|.+++...+.++..|+++++..+....+.... ...+....++.+..+|.......
T Consensus 204 ~~~~d~~l~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~------ 272 (514)
T d1amua_ 204 VTEKDRIGQFASISFDASVWEMFMALLTGASLYIILKDTINDFVKF-----EQYINQKEITVITLPPTYVVHLD------ 272 (514)
T ss_dssp CCTTCEEEECSCTTSTHHHHHHHHHHTTTCEEEECCHHHHTCHHHH-----HHHHHHTTCCEEEECHHHHTTSC------
T ss_pred ccccccccceeccccccccccccccccccccccccccccccchhhh-----hhhhhhhhcccccceeeeccccc------
Confidence 9999999999999999999988889999999988554443332111 12266778888888886544221
Q ss_pred HHhhcchhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHHHHHHHhhCCcc
Q 004977 394 VEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMGAPI 473 (721)
Q Consensus 394 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~~~~~~g~~l 473 (721)
...+.+++.+++||+++++++.+++.. ++.+
T Consensus 273 -----------------------------------------------~~~~~~l~~~~~~G~~~~~~~~~~~~~--~~~~ 303 (514)
T d1amua_ 273 -----------------------------------------------PERILSIQTLITAGSATSPSLVNKWKE--KVTY 303 (514)
T ss_dssp -----------------------------------------------TTTCCSCSEEEEESSCCCHHHHHHHTT--TSEE
T ss_pred -----------------------------------------------ccccccccEEEEecccCCHHHhhhhcc--ceeE
Confidence 112358999999999999999877655 6889
Q ss_pred ccccccccccccccccCCCCC---CCCccCCCcCcceEEEEecCCCCcccCCCCCCcceEEEccccccccccCCCccccc
Q 004977 474 GQAYGLTETCAGSTFSEWDDP---SVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSE 550 (721)
Q Consensus 474 ~~~YG~TE~~~~~~~~~~~~~---~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~ 550 (721)
++.||+||++.+++....... ..++.|.+.++..+.+.| +++..+ ++|+.|||+|+||+++.|||++++.+.+
T Consensus 304 ~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d-~~~~~~---~~g~~GEl~v~~~~~~~gY~~~~~~~~~ 379 (514)
T d1amua_ 304 INAYGPTETTICATTWVATKETIGHSVPIGAPIQNTQIYIVD-ENLQLK---SVGEAGELCIGGEGLARGYWKRPELTSQ 379 (514)
T ss_dssp EEEECCGGGSSCSEEEECCSSCCCSSCCCBEECTTEEEEEEC-TTSCBC---CTTCEEEEEEEETTCCCEETTCHHHHHH
T ss_pred EEeeccccCceeeeeccccccccCcccccccceeeeeEeeec-ccceec---CCCCeeEEEEccCcccccccccccccce
Confidence 999999999988766554433 336788999999999999 666654 4889999999999999999999999988
Q ss_pred ccccC--CCCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcccceEEEEecCCCc---eEEE
Q 004977 551 VYKVD--ERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYVDNIMIHADPFHN---YCVA 625 (721)
Q Consensus 551 ~f~~~--~~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~~---~~~a 625 (721)
.|..+ .+++|||+|||+|++|+||+|+|+||+||+||+ +|++|+|.+||++|.+||+|.+|+|++.++.. .++|
T Consensus 380 ~~~~~~~~~~~~~~~TGD~g~~d~~G~l~i~GR~~d~i~~-~G~~i~p~~IE~~l~~~~~V~~~~V~~~~~~~~g~~~~a 458 (514)
T d1amua_ 380 KFVDNPFVPGEKLYKTGDQARWLSDGNIEYLGRIDNQVKI-RGHRVELEEVESILLKHMYISETAVSVHKDHQEQPYLCA 458 (514)
T ss_dssp HEEECSSSTTSEEEEEEEEEEECTTSCEEEEEEGGGEEEE-TTEEEEHHHHHHHHTTSTTEEEEEEEEEECTTSCEEEEE
T ss_pred eeEeccccCCCceEEECCEEEECCCCcEEEEecccCEEEE-CCEEECHHHHHHHHHhCCCccEEEEEEEECCCCCEEEEE
Confidence 87532 234599999999999999999999999999997 69999999999999999999999999987653 6899
Q ss_pred EEEcChHHHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCCCCCCCCccCcccccCh
Q 004977 626 LVVPSHKALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEPWTPEAGLVTAALKIKR 705 (721)
Q Consensus 626 ~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~~~p~~~~~t~~gKi~R 705 (721)
+|+++++. + .++|+++++ ++|++|++|+.|++++++ | +|++|||+|
T Consensus 459 ~v~~~~~~----------~-----------------~~~l~~~~~-~~l~~~~~p~~i~~v~~l--P----~t~~GKi~R 504 (514)
T d1amua_ 459 YFVSEKHI----------P-----------------LEQLRQFSS-EELPTYMIPSYFIQLDKM--P----LTSNGKIDR 504 (514)
T ss_dssp EEEESSCC----------C-----------------HHHHHHHHH-HHSCGGGSCSEEEECSSC--C----BCTTSSBCG
T ss_pred EEEcCCCC----------C-----------------HHHHHHHHH-hhCCcccCceEEEEeCCC--C----CCCCcChhH
Confidence 99987642 1 267788888 889999999999999997 6 999999999
Q ss_pred HHHHH
Q 004977 706 EQLKA 710 (721)
Q Consensus 706 ~~l~~ 710 (721)
++|++
T Consensus 505 ~~L~~ 509 (514)
T d1amua_ 505 KQLPE 509 (514)
T ss_dssp GGSCC
T ss_pred HhcCC
Confidence 99986
No 6
>d1mdba_ e.23.1.1 (A:) Dihydroxybenzoate-AMP ligase DhbE {Bacillus subtilis [TaxId: 1423]}
Probab=100.00 E-value=8.7e-70 Score=610.72 Aligned_cols=496 Identities=21% Similarity=0.272 Sum_probs=402.2
Q ss_pred CCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEE
Q 004977 82 STMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAIL 161 (721)
Q Consensus 82 ~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~ 161 (721)
.||+++|+++|+++||++|+++ ++ +++||+||+++++++|++|+++|+++||+|+|+
T Consensus 25 ~tl~~~l~~~a~~~pd~~Al~~------------~~-----------~~~Ty~el~~~v~~~A~~L~~~Gv~~gd~V~i~ 81 (536)
T d1mdba_ 25 ETFGDLLRDRAAKYGDRIAITC------------GN-----------THWSYRELDTRADRLAAGFQKLGIQQKDRVVVQ 81 (536)
T ss_dssp CCHHHHHHHHHHHHTTSEEEEE------------TT-----------EEEEHHHHHHHHHHHHHHHHHHTCCTTCEEEEC
T ss_pred CCHHHHHHHHHHHCCCCeEEEE------------CC-----------EeEcHHHHHHHHHHHHHHHHHcCcCCcCEEEEE
Confidence 6999999999999999999985 22 369999999999999999999999999999999
Q ss_pred ccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccchh-----HHHhhhhcCCCccEEEEecCCC
Q 004977 162 AETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLK-----KLSAVSSSLKTIKNVIYFENDG 236 (721)
Q Consensus 162 ~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~-----~~~~~~~~~~~~~~ii~~~~~~ 236 (721)
++|+++|++++|||+++|+++||++|+++.+++.++|++++++++++++.... .........+.+...+......
T Consensus 82 ~~n~~~~~v~~lA~~~~G~i~vpl~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (536)
T d1mdba_ 82 LPNIKEFFEVIFALFRLGALPVFALPSHRSSEITYFCEFAEAAAYIIPDAYSGFDYRSLARQVQSKLPTLKNIIVAGEAE 161 (536)
T ss_dssp CCSSHHHHHHHHHHHHHTCEEEECCTTCCHHHHHHHHHHTTCSEEEEESEETTEEHHHHHHHHHHHCTTCCCEEEESCCT
T ss_pred eCCCHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHHhhccceEeccchhhhhhhhhhhhhhhhccccccceeeeeccc
Confidence 99999999999999999999999999999999999999999999999864432 2222233444444444322211
Q ss_pred CCccCCccCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHHHHHHHhhCCCCCC
Q 004977 237 SEKDSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNPGR 316 (721)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~ 316 (721)
. ...++++ ...+.......++|+++|+|||||||.||||++||+++...+......+ .+.+
T Consensus 162 ~--------------~~~~~~~----~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~-~~~~ 222 (536)
T d1mdba_ 162 E--------------FLPLEDL----HTEPVKLPEVKSSDVAFLQLSGGSTGLSKLIPRTHDDYIYSLKRSVEVC-WLDH 222 (536)
T ss_dssp T--------------SEEGGGC----CCCCCCCCCCCTTSEEEEEECCCSSSSCCEEEEEHHHHHHHHHHHHHHH-TCCT
T ss_pred c--------------ccchhhc----ccCCcCCCccCccchHHhhhcccccccceeccccccccccccccccccc-cccc
Confidence 1 1122221 1222233456789999999999999999999999999999999998888 8999
Q ss_pred CcEEEeccChHHHHHHHH-HHHH-HHhcceEeeC---ccccccccchhhccCccCcceeecceEEeechHHHHHHHHHHH
Q 004977 317 SDVYLAYLPLAHVLELAA-ESIM-LCAGCAIGYG---STLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVV 391 (721)
Q Consensus 317 ~d~~l~~~pl~h~~g~~~-~~~~-l~~G~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~ 391 (721)
+|++++.+|++|.+++.. .+.. +..|++++.. ++..+... +++++++.+..+|..+..+.....
T Consensus 223 ~d~~l~~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~ 291 (536)
T d1mdba_ 223 STVYLAALPMAHNYPLSSPGVLGVLYAGGRVVLSPSPSPDDAFPL-----------IEREKVTITALVPPLAMVWMDAAS 291 (536)
T ss_dssp TCEEEECSCTTSHHHHHSSHHHHHHHTTCEEEECSSSSHHHHHHH-----------HHHHTCSEEEECHHHHHHHHHHHH
T ss_pred ccccccccccccccceeeccccccccccccccccCCCCHHHHHHH-----------Hhhhccccccccchhhhhhhhhcc
Confidence 999999999999999865 3333 4445555552 33333333 889999999999999988765322
Q ss_pred HHHHhhcchhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHHHHHHHhhCC
Q 004977 392 KKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMGA 471 (721)
Q Consensus 392 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~~~~~~g~ 471 (721)
.. ....++++.+++||+++++...+++.+.+|.
T Consensus 292 ~~-----------------------------------------------~~~~~~~~~~~~gG~~~~~~~~~~~~~~~~~ 324 (536)
T d1mdba_ 292 SR-----------------------------------------------RDDLSSLQVLQVGGAKFSAEAARRVKAVFGC 324 (536)
T ss_dssp HC-----------------------------------------------CCCCTTCCEEEEESSCCCHHHHTTHHHHTCS
T ss_pred cc-----------------------------------------------ccccCcceeEEEeccccccccccchhhccCc
Confidence 11 1122589999999999999999999999999
Q ss_pred ccccccccccccccccccCCC-CCCCCccCCCcCcceEEEEecCCCCcccCCCCCCcceEEEccccccccccCCCccccc
Q 004977 472 PIGQAYGLTETCAGSTFSEWD-DPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSE 550 (721)
Q Consensus 472 ~l~~~YG~TE~~~~~~~~~~~-~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~ 550 (721)
.....||.+|.+......... ....+++|.|+++....+++.++++.+ ++++.|||+++|+.++.||+++++.+..
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~v~~~~g~~~---~~~~~Gel~v~g~~~~~gY~~~~~~~~~ 401 (536)
T d1mdba_ 325 TLQQVFGMAEGLVNYTRLDDPEEIIVNTQGKPMSPYDESRVWDDHDRDV---KPGETGHLLTRGPYTIRGYYKAEEHNAA 401 (536)
T ss_dssp EEEEEEECTTSCEEECCTTSCHHHHHHCCCEESSTTCEEEEECTTSCBC---CTTCCEEEEEECTTSCSSCTTCHHHHHH
T ss_pred eeeeccccccccccccccccccccccCCcccCCCCcceEEEEcCCCCee---cccccceeecCCCccccccccccccccc
Confidence 999999999987655543322 223478999987766666665777654 4889999999999999999999999988
Q ss_pred ccccCCCCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcccceEEEEecCCC---ceEEEEE
Q 004977 551 VYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYVDNIMIHADPFH---NYCVALV 627 (721)
Q Consensus 551 ~f~~~~~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~~a~v 627 (721)
.+. .+ |||+|||++++|+||+|+|+||+||+||+ +|++|+|.+||++|.+||+|++|+|++.+++ +.++|+|
T Consensus 402 ~~~--~~--~~~~tGD~~~~~~dG~l~~~GR~~d~i~~-~G~~i~p~~IE~~l~~~p~V~~a~vvg~~~~~~g~~~~a~v 476 (536)
T d1mdba_ 402 SFT--ED--GFYRTGDIVRLTRDGYIVVEGRAKDQINR-GGEKVAAEEVENHLLAHPAVHDAAMVSMPDQFLGERSCVFI 476 (536)
T ss_dssp HBC--TT--SCEEEEEEEEECTTSCEEEEEEGGGCEEC-SSCEECHHHHHHHHTTSTTEEEEEEEEEEETTTEEEEEEEE
T ss_pred ccc--cc--CccccCccccccCCCceecCCCcceEEEE-CCEEECHHHHHHHHHhCCCccEEEEEEEEcCCCCeEEEEEE
Confidence 886 66 89999999999999999999999999997 6999999999999999999999999997654 3589999
Q ss_pred EcChHHHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCCCCCCCCccCcccccChHH
Q 004977 628 VPSHKALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEPWTPEAGLVTAALKIKREQ 707 (721)
Q Consensus 628 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~~~p~~~~~t~~gKi~R~~ 707 (721)
++.++.. . .++|+++++++.||+|++|+.|++++++ | +|++|||+|++
T Consensus 477 ~~~~~~~----------~----------------~~~l~~~l~~~~l~~~~~P~~i~~v~~l--P----~t~~GKi~r~~ 524 (536)
T d1mdba_ 477 IPRDEAP----------K----------------AAELKAFLRERGLAAYKIPDRVEFVESF--P----QTGVGKVSKKA 524 (536)
T ss_dssp EESSSCC----------C----------------HHHHHHHHHHTTCCGGGSCSEEEECSSC--C----BCTTSCBCHHH
T ss_pred EECCCCC----------C----------------HHHHHHHHHhcCCCcCcCccEEEEECCC--C----cCCCcCccHHH
Confidence 9875321 0 2567788874569999999999999987 6 99999999999
Q ss_pred HHHHHHHHHH
Q 004977 708 LKAKFKDDLQ 717 (721)
Q Consensus 708 l~~~~~~~i~ 717 (721)
|+++|+++|.
T Consensus 525 L~~~~~~~l~ 534 (536)
T d1mdba_ 525 LREAISEKLL 534 (536)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999998875
No 7
>d3cw9a1 e.23.1.1 (A:1-503) 4-chlorobenzoyl CoA ligase {Alcaligenes sp. [TaxId: 512]}
Probab=100.00 E-value=3.5e-66 Score=575.71 Aligned_cols=489 Identities=20% Similarity=0.260 Sum_probs=390.7
Q ss_pred CCCHHHHHHHHHHhCCCCCceeeeeeccccccccCCCccceeccCCCcEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEE
Q 004977 81 ASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAI 160 (721)
Q Consensus 81 ~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i 160 (721)
++||+++|+++|+++||++|+++.+ ++ +++||+||.++++++|++|+++|+++||+|+|
T Consensus 1 ~~ti~~~l~~~a~~~pd~~al~~~~----------~~-----------~~~Ty~el~~~~~~~a~~L~~~Gv~~gd~V~i 59 (503)
T d3cw9a1 1 MQTVNEMLRRAATRAPDHCALAVPA----------RG-----------LRLTHAELRARVEAVAARLHADGLRPQQRVAV 59 (503)
T ss_dssp CCCHHHHHHHHHHHSTTSEEEEEGG----------GT-----------EEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEE
T ss_pred CCCHHHHHHHHHHhCCCCeEEEECC----------CC-----------cEEeHHHHHHHHHHHHHHHHHcCcCCCCEEEE
Confidence 4799999999999999999998742 33 37999999999999999999999999999999
Q ss_pred EccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccchhHHHhhhhcCCCccEEEEecCCCCCcc
Q 004977 161 LAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEKD 240 (721)
Q Consensus 161 ~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~ 240 (721)
+++|+++|++++|||+++|++++|+++.++++++.+++++++++++|++..... .......... ..++.+
T Consensus 60 ~~~n~~~~~~~~lA~~~~G~v~vpi~~~~~~~~i~~~l~~~~~~~~i~~~~~~~-~~~~~~~~~~-~~~i~~-------- 129 (503)
T d3cw9a1 60 VAPNSADVVIAILALHRLGAVPALLNPRLKSAELAELIKRGEMTAAVIAVGRQV-ADAIFQSGSG-ARIIFL-------- 129 (503)
T ss_dssp ECCSCHHHHHHHHHHHHHTCEEEEECTTSCHHHHHHHHHHTTCSEEEESSCHHH-HHHHHHTTCC-CEEEEH--------
T ss_pred EeCCCHHHHHHHHHHHHhCcEEEEeCCCCCHHHHHHHHHhcCCcEEEeecchHH-HHHHhhhccc-cccccc--------
Confidence 999999999999999999999999999999999999999999999999876432 2222222222 223322
Q ss_pred CCccCCCCCceEeeHHHHHhcC----CCCCCCCCCCCCCCeEEEEeccCCCCCcchheeccHHHHHHHHHHHhhC-CCCC
Q 004977 241 SGVSGGISNWTVSSFSEVEKLG----KRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLI-PNPG 315 (721)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~-~~~~ 315 (721)
+++.... ...+......+++++++|+|||||||.||+|+++|+++...+......+ ....
T Consensus 130 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~ 194 (503)
T d3cw9a1 130 ---------------GDLVRDGEPYSYGPPIEDPQREPAQPAFIFYTSGTTGLPKAAIIPQRAAESRVLFMSTQVGLRHG 194 (503)
T ss_dssp ---------------HHHEETTEECCCSCCCCCCCCCTTSEEEEEEECCSSSSCEEEEEEGGGHHHHHHHHHHTSCCCSS
T ss_pred ---------------hhhhhhhcccccCCccccccchhhhhhhhcccccccccccccccccchhhhhhhhcccccccccc
Confidence 2222111 1122233456789999999999999999999999999999998887765 2445
Q ss_pred CCcEEEeccChHHHHHHHH-HHHHHHhcceEeeCc---cccccccchhhccCccCcceeecceEEeechHHHHHHHHHHH
Q 004977 316 RSDVYLAYLPLAHVLELAA-ESIMLCAGCAIGYGS---TLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVV 391 (721)
Q Consensus 316 ~~d~~l~~~pl~h~~g~~~-~~~~l~~G~~~~~~~---~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~ 391 (721)
..++++..+|++|.++... .+.+...++++++.. +...... +..++++++..+|+.+..+.....
T Consensus 195 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------i~~~~~~~~~~~~~~~~~~~~~~~ 263 (503)
T d3cw9a1 195 RHNVVLGLMPLYHVVGFFAVLVAALALDGTYVVVEEFRPVDALQL-----------VQQEQVTSLFATPTHLDALAAAAA 263 (503)
T ss_dssp TTCEEEECSCTTSHHHHHTTHHHHHHTTCEEEECSSCCHHHHHHH-----------HHHHTCCEEEECHHHHHHHHHHHH
T ss_pred ccccccccCccccccccccccccccccccccccccccChHHhhhh-----------hhhceeeccccccccccccccccc
Confidence 6789999999998888765 555667777777633 3333333 888999999999999888765322
Q ss_pred HHHHhhcchhhHHHHHHHHHHHHhhhccccccCCchhhhHHHHHHHHHHHHhCCcEEEEEecCCCCCHHHHHHHHHhhCC
Q 004977 392 KKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMGA 471 (721)
Q Consensus 392 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~l~~~~~~~~~~~~g~ 471 (721)
... +....++||.+++||++++++....+...++.
T Consensus 264 ~~~---------------------------------------------~~~~~~~Lr~i~~gG~~~~~~~~~~~~~~~~~ 298 (503)
T d3cw9a1 264 HAG---------------------------------------------SSLKLDSLRHVTFAGATMPDAVLETVHQHLPG 298 (503)
T ss_dssp HTC---------------------------------------------TTCCCTTCCEEEECSSCCCHHHHHHHHHHCCS
T ss_pred ccc---------------------------------------------ccccccceEEEEeccccccccccccccccccc
Confidence 111 11223589999999999999999999999999
Q ss_pred ccccccccccccccccccCCCCCCCCccCCCcCcceEEEEecCCCCcccCCCCCCcceEEEcc-ccccccccCCCccccc
Q 004977 472 PIGQAYGLTETCAGSTFSEWDDPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGG-FNVTAGYFNNPGKTSE 550 (721)
Q Consensus 472 ~l~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g-~~v~~gY~~~~~~t~~ 550 (721)
.+.+.||+||++..+...........+.+.+.+...+.+.+ ..+.. ++.|+.|++++.+ +....+|+++++.|.+
T Consensus 299 ~~~~~yg~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~g~~g~~~~~~~~~~~~~~~~~~~~t~~ 374 (503)
T d3cw9a1 299 EKVNIYGTTEAMNSLYMRQPKTGTEMAPGFFSEVRIVRIGG-GVDEI---VANGEEGELIVAASDSAFVGYLNQPQATAE 374 (503)
T ss_dssp EEEEEEEETTTEEEEEEESCSSSSEEBCCTTCCEEEECTTS-CTTCB---CCTTCCEEEEEECCTTSCCCBTTCHHHHHH
T ss_pred cccccccccccceeeeeccccccccccccccccceeeeeec-ccCcc---cCCCccccccccccccccccccCChhhhHH
Confidence 99999999999988776665555555555555555554444 44443 4578889887765 4667789999999999
Q ss_pred ccccCCCCcceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhcCcccceEEEEecCCC---ceEEEEE
Q 004977 551 VYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALISSDYVDNIMIHADPFH---NYCVALV 627 (721)
Q Consensus 551 ~f~~~~~g~gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~~a~v 627 (721)
.| .| |||+|||+|++|+||+|+++||+||+||+ +|++|+|.+||++|.+||+|.+|+|++.+++ +.++|+|
T Consensus 375 ~~---~~--g~~~TgD~g~~~~dG~l~~~GR~~d~ik~-~G~~v~~~~IE~~l~~~p~V~~~~v~~~~~~~~g~~~~a~v 448 (503)
T d3cw9a1 375 KL---QD--GWYRTSDVAVWTPEGTVRILGRVDDMIIS-GGENIHPSEIERVLGTAPGVTEVVVIGLADQRWGQSVTACV 448 (503)
T ss_dssp HE---ET--TEEEEEEEEEECTTSCEEEEEESSCCEEE-TTEEECHHHHHHHHTTSTTEEEEEEEEEEETTTEEEEEEEE
T ss_pred Hh---cC--CceecccccccccCCeEEeCCCcCCeEEE-CCEEECHHHHHHHHHhCCCccEEEEEEEECCCCCeEEEEEE
Confidence 88 67 89999999999999999999999999998 5999999999999999999999999998765 3699999
Q ss_pred EcChHHHHHHHHHhCCCcccHHHHhccHHHHHHHHHHHHHHHHHCCCCCcccccEEEeeCCCCCCCCCccCcccccChHH
Q 004977 628 VPSHKALEKWAHEASIKYEDLSELCNKAEAVNEVQQALSKVAKAAKLDKFEIPAKIKLMPEPWTPEAGLVTAALKIKREQ 707 (721)
Q Consensus 628 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~~~~~~~p~~~~~t~~gKi~R~~ 707 (721)
+++.+. ..+ .++|++++++.+||+|++|+.|++++++ | +|++|||+|++
T Consensus 449 ~~~~~~----------~~~---------------~~~l~~~~~~~~l~~~~~P~~i~~v~~~--P----~t~~GKi~R~~ 497 (503)
T d3cw9a1 449 VPRLGE----------TLS---------------ADALDTFCRSSELADFKRPKRYFILDQL--P----KNALNKVLRRQ 497 (503)
T ss_dssp EECTTC----------CCC---------------HHHHHHHHHHSSSCGGGSCSEEEECSCC--C----BCTTSCBCHHH
T ss_pred EeCCCC----------CCC---------------HHHHHHHHHhcCCCCCCCccEEEEECCC--C----cCCCcCccHHH
Confidence 987542 111 2677788865899999999999999987 6 99999999999
Q ss_pred HHHHH
Q 004977 708 LKAKF 712 (721)
Q Consensus 708 l~~~~ 712 (721)
|++++
T Consensus 498 L~~~~ 502 (503)
T d3cw9a1 498 LVQQV 502 (503)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 99875
No 8
>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}
Probab=56.47 E-value=34 Score=28.23 Aligned_cols=61 Identities=7% Similarity=-0.011 Sum_probs=40.7
Q ss_pred HHhC-CCCCCCEEEEEccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECc
Q 004977 147 LVNF-GHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDS 210 (721)
Q Consensus 147 L~~~-Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~ 210 (721)
|.+. ++++|++|.|..-.+.-=..++..+-..|+.++-+.. +++.+ ..+++.+++.+|-..
T Consensus 20 l~~~~~~~~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~--~~~~~-~~~~~~Ga~~vi~~~ 81 (174)
T d1yb5a2 20 LIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAG--TEEGQ-KIVLQNGAHEVFNHR 81 (174)
T ss_dssp HHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEES--SHHHH-HHHHHTTCSEEEETT
T ss_pred HHHHhCCCCCCEEEEEeccccccccccccccccCcccccccc--ccccc-ccccccCcccccccc
Confidence 3444 7999999999997554444444445777887776653 34544 556678888887543
No 9
>d1pg4a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Salmonella enterica [TaxId: 28901]}
Probab=51.68 E-value=36 Score=35.06 Aligned_cols=103 Identities=12% Similarity=0.028 Sum_probs=69.5
Q ss_pred EeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEccCcHhH--HHHHHHHHhcCCEEEEecC--C-CCHHHHHHHHHhcCce
Q 004977 130 WQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVEW--FIAFQGCFRQSITVVTIYS--S-LGEDALIHSLNETQVT 204 (721)
Q Consensus 130 ~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~--~~~~lA~~~~G~~~vpl~~--~-~~~~~l~~~l~~~~~~ 204 (721)
.+|.+.+......... ...++.++|++...++-+..+ ...+++.+..|+..+..+. . ..++++..++++.+++
T Consensus 271 ~~sh~~~l~~~~~~~~--~~~~~~~~d~~~~~~p~~~~~g~~~~l~~~L~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt 348 (643)
T d1pg4a_ 271 LHTTGGYLVYAATTFK--YVFDYHPGDIYWCTADVGWVTGHSYLLYGPLACGATTLMFEGVPNWPTPARMCQVVDKHQVN 348 (643)
T ss_dssp EEESHHHHHHHHHHHH--HHTTCCTTCEEEECSCTTSHHHHHHTTHHHHHTTCEEEEECSCTTSSSTTHHHHHHHHHTCS
T ss_pred EEccHHHHHHHHHHHH--HhhCCCCCCEEEEeCChHHHHHHHHHHHHHHHhCCEEEEecCCCCCCCHHHHHHHHHHHCCc
Confidence 4676665433322222 234789999998888776432 3356788999998887642 2 3568899999999999
Q ss_pred EEEECccchhHHHhhhh------cCCCccEEEEecC
Q 004977 205 TLICDSKQLKKLSAVSS------SLKTIKNVIYFEN 234 (721)
Q Consensus 205 ~vi~~~~~~~~~~~~~~------~~~~~~~ii~~~~ 234 (721)
++.+.+.....+..... .+++++.++..+.
T Consensus 349 ~~~~~P~~l~~l~~~~~~~~~~~dl~sLr~i~~~G~ 384 (643)
T d1pg4a_ 349 ILYTAPTAIRALMAEGDKAIEGTDRSSLRILGSVGE 384 (643)
T ss_dssp EEEECHHHHHHHHTTGGGGTTTCCCTTCCEEEEESS
T ss_pred EEEehHHHHHHHHhCcchhccccCCCceEEEEEEeC
Confidence 99999887766644321 2456777776543
No 10
>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}
Probab=51.04 E-value=26 Score=28.77 Aligned_cols=60 Identities=8% Similarity=0.020 Sum_probs=40.2
Q ss_pred HHhCCCCCCCEEEEEccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECc
Q 004977 147 LVNFGHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDS 210 (721)
Q Consensus 147 L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~ 210 (721)
++..++++||+|.|+..-..-.+++++| -..|+.++.++. .++++ ..+++.++...+...
T Consensus 19 ~~~~~~~~g~~vlV~G~G~vG~~~~~~a-k~~Ga~vi~v~~--~~~r~-~~a~~~ga~~~~~~~ 78 (170)
T d1e3ja2 19 CRRAGVQLGTTVLVIGAGPIGLVSVLAA-KAYGAFVVCTAR--SPRRL-EVAKNCGADVTLVVD 78 (170)
T ss_dssp HHHHTCCTTCEEEEECCSHHHHHHHHHH-HHTTCEEEEEES--CHHHH-HHHHHTTCSEEEECC
T ss_pred HHHhCCCCCCEEEEEcccccchhhHhhH-hhhcccccccch--HHHHH-HHHHHcCCcEEEecc
Confidence 4566999999999997555555555554 567887777754 34444 455666777766544
No 11
>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}
Probab=50.48 E-value=29 Score=29.52 Aligned_cols=60 Identities=10% Similarity=-0.057 Sum_probs=40.6
Q ss_pred HHhCCCCCCCEEEEEccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEC
Q 004977 147 LVNFGHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICD 209 (721)
Q Consensus 147 L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~ 209 (721)
+...++++||.|+|+.--..-.+++.+|...-+..++.++++ ++++ ...++.++..++..
T Consensus 18 ~~~a~v~~G~tVlV~GaG~vGl~a~~~ak~~ga~~Vi~~d~~--~~rl-~~a~~~Ga~~~~~~ 77 (195)
T d1kola2 18 AVTAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLN--PARL-AHAKAQGFEIADLS 77 (195)
T ss_dssp HHHTTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESC--HHHH-HHHHHTTCEEEETT
T ss_pred HHHhCCCCCCEEEEECcCHHHHHHHHHHHhhcccceeeeccc--chhh-HhhhhccccEEEeC
Confidence 556799999999999765567666666665444466666553 4444 45566778877643
No 12
>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=50.47 E-value=48 Score=27.10 Aligned_cols=63 Identities=13% Similarity=0.011 Sum_probs=43.4
Q ss_pred HHHHhCCCCCCCEEEEEccCcHhHHHHHHHHHhcCC-EEEEecCCCCHHHHHHHHHhcCceEEEECcc
Q 004977 145 SGLVNFGHNVDTRAAILAETCVEWFIAFQGCFRQSI-TVVTIYSSLGEDALIHSLNETQVTTLICDSK 211 (721)
Q Consensus 145 ~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~-~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~ 211 (721)
+++++.++++||.|+|+..-..-..+++++.. .|+ .++.++.+ ++++. +.++.+++.++...+
T Consensus 17 ~a~~~~~~~~gd~VlI~G~G~iG~~~~~~a~~-~G~~~Vi~~d~~--~~rl~-~a~~~Ga~~~~~~~~ 80 (171)
T d1pl8a2 17 HACRRGGVTLGHKVLVCGAGPIGMVTLLVAKA-MGAAQVVVTDLS--ATRLS-KAKEIGADLVLQISK 80 (171)
T ss_dssp HHHHHHTCCTTCEEEEECCSHHHHHHHHHHHH-TTCSEEEEEESC--HHHHH-HHHHTTCSEEEECSS
T ss_pred HHHHHhCCCCCCEEEEECCCccHHHHHHHHHH-cCCceEEeccCC--HHHHH-HHHHhCCcccccccc
Confidence 44566699999999999886666666666654 677 45555543 44544 557788888777654
No 13
>d2ayia1 e.60.1.1 (A:3-408) Aminopeptidase T {Thermus thermophilus [TaxId: 274]}
Probab=49.37 E-value=19 Score=34.91 Aligned_cols=50 Identities=10% Similarity=0.090 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHhC--CCCCCCEEEEEccCc-HhHHH-HHHHHHhcCCEEEEec
Q 004977 137 FDRACSFASGLVNF--GHNVDTRAAILAETC-VEWFI-AFQGCFRQSITVVTIY 186 (721)
Q Consensus 137 ~~~v~~lA~~L~~~--Gv~~gd~V~i~~~n~-~e~~~-~~lA~~~~G~~~vpl~ 186 (721)
.++.+++|..|.+. ++++|+.|.|.++.. .+++. ..-++.++||.+|.+.
T Consensus 3 ~~~L~k~A~llV~~~l~vqkGe~VlI~a~~~~~~Lvral~e~A~~~GA~pv~v~ 56 (406)
T d2ayia1 3 KRNLEKLAELAIRVGLNLEKGQEVIATAPIEAVDFVRLLAEKAYREGASLFTVI 56 (406)
T ss_dssp HHHHHHHHHHHHHTTTCCCTTCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHHHHHHcccCCCCCEEEEEcccchHHHHHHHHHHHHHcCCCeEEEe
Confidence 46788899999876 789999999998774 44433 4446788999776553
No 14
>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}
Probab=48.20 E-value=21 Score=29.62 Aligned_cols=64 Identities=11% Similarity=-0.060 Sum_probs=42.7
Q ss_pred HHHhCCCCCCCEEEEEccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccc
Q 004977 146 GLVNFGHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQ 212 (721)
Q Consensus 146 ~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~ 212 (721)
.|.+.++++||+|.|....+.-=..+...+-..|+.++.+..+ ++++ ..+++.+++.++...+.
T Consensus 19 al~~~~~~~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~--~~~~-~~~~~lGa~~~i~~~~~ 82 (171)
T d1iz0a2 19 ALKRAQARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASR--PEKL-ALPLALGAEEAATYAEV 82 (171)
T ss_dssp HHHHTTCCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESS--GGGS-HHHHHTTCSEEEEGGGH
T ss_pred HHHHhCCCCCCEEEEEeccccchhhhhhhhccccccccccccc--cccc-ccccccccceeeehhhh
Confidence 3566789999999999976665444455556678877766543 3333 34567788888765443
No 15
>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}
Probab=48.14 E-value=25 Score=28.89 Aligned_cols=64 Identities=8% Similarity=0.023 Sum_probs=45.4
Q ss_pred HHHHhCCCCCCCEEEEEccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccc
Q 004977 145 SGLVNFGHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQ 212 (721)
Q Consensus 145 ~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~ 212 (721)
+.|+..++++||+|.|+..-..-.+++.+|- ..|+-.+-++.+.. ++ ..+++.+++.++...+.
T Consensus 21 ~al~~~~~~~G~~VlI~GaG~vG~~a~qlak-~~Ga~~i~~~~~~~--~~-~~a~~lGad~~i~~~~~ 84 (168)
T d1uufa2 21 SPLRHWQAGPGKKVGVVGIGGLGHMGIKLAH-AMGAHVVAFTTSEA--KR-EAAKALGADEVVNSRNA 84 (168)
T ss_dssp HHHHHTTCCTTCEEEEECCSHHHHHHHHHHH-HTTCEEEEEESSGG--GH-HHHHHHTCSEEEETTCH
T ss_pred HHHHHhCCCCCCEEEEeccchHHHHHHHHhh-cccccchhhccchh--HH-HHHhccCCcEEEECchh
Confidence 4567779999999999987667777777766 46887776655433 32 45677888888765543
No 16
>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}
Probab=48.07 E-value=25 Score=29.03 Aligned_cols=60 Identities=7% Similarity=-0.002 Sum_probs=44.3
Q ss_pred HhCCCCCCCEEEEEccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECc
Q 004977 148 VNFGHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDS 210 (721)
Q Consensus 148 ~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~ 210 (721)
...++++||.|.|+..-..-..++.++....+..++.++.+- ++ ....++.+++.+|-..
T Consensus 22 ~~a~~k~g~~VlI~G~Gg~g~~~~~~~~~~g~~~Vi~~~~~~--~r-l~~a~~~GAd~~in~~ 81 (175)
T d1cdoa2 22 NTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNP--DK-FEKAKVFGATDFVNPN 81 (175)
T ss_dssp TTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCG--GG-HHHHHHTTCCEEECGG
T ss_pred HhhCCCCCCEEEEEecCCccchHHHHHHHHhhchheeecchH--HH-HHHHHHcCCcEEEcCC
Confidence 345899999999999888888888888877777777776542 23 3456678888888543
No 17
>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=46.44 E-value=33 Score=28.17 Aligned_cols=64 Identities=13% Similarity=0.015 Sum_probs=43.8
Q ss_pred HHHHhCCCCCCCEEEEEccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccc
Q 004977 145 SGLVNFGHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQ 212 (721)
Q Consensus 145 ~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~ 212 (721)
+.|+..++++||+|.|+..-..-.+++.+|- ..|+-++.++.+- +++. ..++.+++.++...+.
T Consensus 18 ~al~~~~~~~g~~vlI~GaG~vG~~a~q~ak-~~G~~vi~~~~~~--~k~~-~a~~lGa~~~i~~~~~ 81 (168)
T d1piwa2 18 SPLVRNGCGPGKKVGIVGLGGIGSMGTLISK-AMGAETYVISRSS--RKRE-DAMKMGADHYIATLEE 81 (168)
T ss_dssp HHHHHTTCSTTCEEEEECCSHHHHHHHHHHH-HHTCEEEEEESSS--TTHH-HHHHHTCSEEEEGGGT
T ss_pred HHHHHhCcCCCCEEEEECCCCcchhHHHHhh-hccccccccccch--hHHH-HhhccCCcEEeeccch
Confidence 4566779999999999987556666665555 5688877776543 3333 4566788877765443
No 18
>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=45.77 E-value=35 Score=27.82 Aligned_cols=62 Identities=11% Similarity=0.018 Sum_probs=42.2
Q ss_pred HHHHhCCCCCCCEEEEEccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECc
Q 004977 145 SGLVNFGHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDS 210 (721)
Q Consensus 145 ~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~ 210 (721)
++|++.++++||+|.|+..-..-..++.+| -..|+.++.++. .++++ ...++.+++.++...
T Consensus 18 ~al~~~~~~~g~~VlV~GaG~vG~~~~~~a-k~~G~~Vi~~~~--~~~~~-~~a~~~Ga~~~i~~~ 79 (166)
T d1llua2 18 KGLKQTNARPGQWVAISGIGGLGHVAVQYA-RAMGLHVAAIDI--DDAKL-ELARKLGASLTVNAR 79 (166)
T ss_dssp HHHHHHTCCTTCEEEEECCSHHHHHHHHHH-HHTTCEEEEEES--CHHHH-HHHHHTTCSEEEETT
T ss_pred HHHHHhCCCCCCEEEEeeccccHHHHHHHH-HHcCCccceecc--hhhHH-HhhhccCcccccccc
Confidence 445667899999999998755665555544 566887777754 35554 455677888777543
No 19
>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}
Probab=41.27 E-value=34 Score=28.14 Aligned_cols=60 Identities=10% Similarity=0.030 Sum_probs=40.5
Q ss_pred hCCCCCCCEEEEEccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECcc
Q 004977 149 NFGHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSK 211 (721)
Q Consensus 149 ~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~ 211 (721)
..++++||.|.|+.-...-...+.+|...-...++..+.+ +++ ..+.++.+++.+|-..+
T Consensus 23 ~~~~~~G~tVlI~GaGGvG~~aiq~ak~~G~~~vi~~~~~--~~k-~~~ak~lGa~~~i~~~~ 82 (176)
T d2fzwa2 23 TAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDIN--KDK-FARAKEFGATECINPQD 82 (176)
T ss_dssp TTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSC--GGG-HHHHHHHTCSEEECGGG
T ss_pred hhCCCCCCEEEEecchhHHHHHHHHHHHHhcCceEEEccc--HHH-HHHHHHhCCcEEEeCCc
Confidence 3479999999999987776666666666544556555443 222 34566788888876544
No 20
>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}
Probab=40.27 E-value=39 Score=27.81 Aligned_cols=61 Identities=7% Similarity=-0.051 Sum_probs=44.6
Q ss_pred HhCCCCCCCEEEEEccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECcc
Q 004977 148 VNFGHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSK 211 (721)
Q Consensus 148 ~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~ 211 (721)
...++++||.|.|+.--..-..+++++...-+..++.++.+-... ....+.++..++...+
T Consensus 22 ~~~~vk~GdtVlV~GaGG~G~~~~~~~~~~g~~~Vi~~~~~~~k~---~~a~~~Ga~~~i~~~~ 82 (176)
T d2jhfa2 22 KVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKF---AKAKEVGATECVNPQD 82 (176)
T ss_dssp TTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGH---HHHHHTTCSEEECGGG
T ss_pred HhhCCCCCCEEEEECCCCcHHHHHHHHHHcCCceEEeecCcHHHH---HHHHHhCCeeEEecCC
Confidence 345799999999999988888888888877667888776654433 3456667777765543
No 21
>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=38.89 E-value=52 Score=26.60 Aligned_cols=62 Identities=18% Similarity=0.136 Sum_probs=42.5
Q ss_pred HHHhCCCCCCCEEEEEccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECcc
Q 004977 146 GLVNFGHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSK 211 (721)
Q Consensus 146 ~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~ 211 (721)
.|+..++++||+|.|...-+.-.++ ...+...|+.++-+. .+++++. .+++.+++.++...+
T Consensus 19 al~~~~~~~g~~vlv~G~G~iG~~a-~~~a~~~g~~v~~~~--~~~~r~~-~~k~~Ga~~~~~~~~ 80 (168)
T d1rjwa2 19 ALKVTGAKPGEWVAIYGIGGLGHVA-VQYAKAMGLNVVAVD--IGDEKLE-LAKELGADLVVNPLK 80 (168)
T ss_dssp HHHHHTCCTTCEEEEECCSTTHHHH-HHHHHHTTCEEEEEC--SCHHHHH-HHHHTTCSEEECTTT
T ss_pred HHHHhCCCCCCEEEEeecccchhhh-hHHHhcCCCeEeccC--CCHHHhh-hhhhcCcceeccccc
Confidence 4556689999999999876666554 444456777655543 3555554 567788988877554
No 22
>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}
Probab=38.81 E-value=94 Score=25.19 Aligned_cols=60 Identities=10% Similarity=-0.064 Sum_probs=40.4
Q ss_pred HHHhC-CCCCCCEEEEEccCc-HhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEC
Q 004977 146 GLVNF-GHNVDTRAAILAETC-VEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICD 209 (721)
Q Consensus 146 ~L~~~-Gv~~gd~V~i~~~n~-~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~ 209 (721)
.|.+. .+++||.|.|....+ .-.++..+| -..|+.++-+..+ ++.. ..+++.+++.+|-.
T Consensus 19 al~~~~~l~~g~~Vlv~ga~g~vG~~~iqla-k~~Ga~Vi~~~~s--~~k~-~~~~~lGa~~vi~~ 80 (179)
T d1qora2 19 LLRKTYEIKPDEQFLFHAAAGGVGLIACQWA-KALGAKLIGTVGT--AQKA-QSALKAGAWQVINY 80 (179)
T ss_dssp HHHTTSCCCTTCEEEESSTTBHHHHHHHHHH-HHHTCEEEEEESS--HHHH-HHHHHHTCSEEEET
T ss_pred HHHHHhCCCCCCEEEEEccccccchHHHHHH-HHhCCeEeecccc--hHHH-HHHHhcCCeEEEEC
Confidence 34454 689999999998888 555555555 5688876666433 4444 44566788888753
No 23
>d1ry2a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=37.78 E-value=66 Score=32.73 Aligned_cols=102 Identities=11% Similarity=0.037 Sum_probs=68.7
Q ss_pred EeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEccCcHh--HHHHHHHHHhcCCEEEEecCC---CCHHHHHHHHHhcCce
Q 004977 130 WQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVE--WFIAFQGCFRQSITVVTIYSS---LGEDALIHSLNETQVT 204 (721)
Q Consensus 130 ~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e--~~~~~lA~~~~G~~~vpl~~~---~~~~~l~~~l~~~~~~ 204 (721)
.+|.+-+......... ...++.++|++...+|-+.. ....+++++..|+..+..+.. ..++.+..++++.++.
T Consensus 258 ~~~h~~~~~~~~~~~~--~~~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt 335 (640)
T d1ry2a_ 258 QHSTAGYLLGALLTMR--YTFDTHQEDVFFTAGDIGWITGHTYVVYGPLLYGCATLVFEGTPAYPNYSRYWDIIDEHKVT 335 (640)
T ss_dssp EECSHHHHHHHHHHHH--HHSCCCSSCEEEECSCTTSHHHHHHTTHHHHHHTSEEEEECSCTTSSCTTHHHHHHHHTTCS
T ss_pred eeccccHHHHHHHHHH--hhcCCCcccceeeccchhhhhhHHHHHHHHHHhCCEEEEecCCCCCCCHHHHHHHHHHhCcc
Confidence 3566555443332222 23578899999998887643 345678899999887776543 2567899999999999
Q ss_pred EEEECccchhHHHhhhh------cCCCccEEEEec
Q 004977 205 TLICDSKQLKKLSAVSS------SLKTIKNVIYFE 233 (721)
Q Consensus 205 ~vi~~~~~~~~~~~~~~------~~~~~~~ii~~~ 233 (721)
.+.+.+.....+..... .+++++.++..+
T Consensus 336 ~~~~~P~~~~~l~~~~~~~~~~~~l~sLr~v~~gG 370 (640)
T d1ry2a_ 336 QFYVAPTALRLLKRAGDSYIENHSLKSLRCLGSVG 370 (640)
T ss_dssp EEEECHHHHHHHTTSCTTSSSSCCCTTCCEEEECS
T ss_pred EEEcChHHHHHHHhccccccccCCCCceEEEEEec
Confidence 99999887766654321 245667666543
No 24
>d2cvba1 c.47.1.10 (A:2-188) Probable thiol-disulfide isomerase/thioredoxin TTHA0593 {Thermus thermophilus [TaxId: 274]}
Probab=34.32 E-value=9.5 Score=32.61 Aligned_cols=44 Identities=18% Similarity=0.045 Sum_probs=32.9
Q ss_pred ceEeeCcEEEEccCCeEEEEecCCCeEEcCCeeeeechHHHHHHhc
Q 004977 560 CWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALIS 605 (721)
Q Consensus 560 gw~~TGDlg~~d~dG~l~i~GR~~d~ik~~~G~~v~p~eIE~~l~~ 605 (721)
+-..|-....+|++|.|.+.||.||.-. +...+.-.+++++|.+
T Consensus 112 ~v~~~P~~~liD~~G~i~y~G~idd~~~--~~~~~~~~~L~~Ai~~ 155 (187)
T d2cvba1 112 RALRTPEVFLFDERRLLRYHGRVNDNPK--DPSKVQSHDLEAAIEA 155 (187)
T ss_dssp TCCEESEEEEECTTCBEEEEECSSSCTT--CGGGCCCCHHHHHHHH
T ss_pred cccceeeEEEEcCCCeEEEEeeecCCCC--CCCCCCHHHHHHHHHH
Confidence 4456777888999999999999999743 3455666677776654
No 25
>d1ofux_ c.37.1.22 (X:) Hypothetical protein PA3008 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=32.71 E-value=98 Score=23.61 Aligned_cols=64 Identities=14% Similarity=0.017 Sum_probs=44.8
Q ss_pred HHHHHhCCCCCCCEEEEEccCcHhHHHHHHHHHhcCCEEEEe--cCCCCHHHHHHH---HHhcCceEEE
Q 004977 144 ASGLVNFGHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTI--YSSLGEDALIHS---LNETQVTTLI 207 (721)
Q Consensus 144 A~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl--~~~~~~~~l~~~---l~~~~~~~vi 207 (721)
+.+|.+.|+.+...+.|...+..+.+.++--+++.|...+.+ .+.++...++.+ .+..+...++
T Consensus 47 a~~L~~~Gi~~~rll~v~~~~~~d~lwa~EqaL~sg~~~aVl~w~~~l~~~~~RRLqlAA~~g~t~~~l 115 (119)
T d1ofux_ 47 HEWLRRAGLNRERILLLQAKDNAAALALSCEALRLGRSHTVVSWLEPLSRAARKQLSRAAQLGQAQSLN 115 (119)
T ss_dssp HHHHHHTTCCTTSEEEECCSSHHHHHHHHHHHHHHTCEEEEEECCSSCCHHHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHcCCCCCeEEEEeCCChHHHHHHHHHHHhcCCccEEEEcCCCCChHHHHHHHHHHHhcCCEEEE
Confidence 778999999998888887778889999999999998644443 455665544333 4444444443
No 26
>d1udxa3 d.242.1.1 (A:341-416) Obg GTP-binding protein C-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=31.83 E-value=11 Score=26.81 Aligned_cols=31 Identities=16% Similarity=0.021 Sum_probs=22.5
Q ss_pred eeHHHHHHHHHHHHHHHHhCCCCCCCEEEEE
Q 004977 131 QTYGEVFDRACSFASGLVNFGHNVDTRAAIL 161 (721)
Q Consensus 131 ~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~ 161 (721)
+.|-+=.-+...+-..|+++|++.||.|-|.
T Consensus 36 ~~~f~~~l~~~Gv~~~L~~~Gak~GD~V~Ig 66 (76)
T d1udxa3 36 AGYLQEVFRRQGVEAALRAKGVRAGDLVRIG 66 (76)
T ss_dssp HHHHHHHHHHTTHHHHHHTTTCCTTCEEEET
T ss_pred HHHHHHHHHHCChHHHHHHcCCCCCCEEEEC
Confidence 4444444445567889999999999999773
No 27
>d1e0ca2 c.46.1.2 (A:136-271) Sulfurtransferase {Azotobacter vinelandii [TaxId: 354]}
Probab=31.08 E-value=33 Score=27.15 Aligned_cols=46 Identities=15% Similarity=0.062 Sum_probs=37.7
Q ss_pred HHHHHHHHhCCCCCCCEEEEEccCcHhHHHHHHHHHhcCCEEEEec
Q 004977 141 CSFASGLVNFGHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIY 186 (721)
Q Consensus 141 ~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~ 186 (721)
..+...|.+.|+.+++.|.++|..+.....+++++..+|..-|-++
T Consensus 74 ~~l~~~~~~~gi~~~~~vV~yC~~G~~a~~~~~~l~~~G~~~v~~y 119 (136)
T d1e0ca2 74 TDIAGRLEELGITPDKEIVTHCQTHHRSGLTYLIAKALGYPRVKGY 119 (136)
T ss_dssp TTHHHHHHHTTCCTTSEEEEECSSSSHHHHHHHHHHHTTCSCEEEC
T ss_pred HHHhhhhhhcccCCCCceEEeCCChHHHHHHHHHHHHcCCCCcEEe
Confidence 3466778889999999999999998888888888889998655554
No 28
>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}
Probab=31.02 E-value=50 Score=27.55 Aligned_cols=60 Identities=18% Similarity=0.173 Sum_probs=43.7
Q ss_pred CCCCCCCEEEEE-ccCc-HhHHHHHHHHHhcCCEEEE-ecCCCCHHHHHHHHHhcCceEEEECc
Q 004977 150 FGHNVDTRAAIL-AETC-VEWFIAFQGCFRQSITVVT-IYSSLGEDALIHSLNETQVTTLICDS 210 (721)
Q Consensus 150 ~Gv~~gd~V~i~-~~n~-~e~~~~~lA~~~~G~~~vp-l~~~~~~~~l~~~l~~~~~~~vi~~~ 210 (721)
.++++|+.|.|+ ...+ .-..+..+|=. .|+.++- +...-..++....+++.+++.+|..+
T Consensus 24 ~~~~~g~~vli~~ga~g~vG~~aiqlAk~-~Ga~vI~~v~~~~~~~~~~~~~~~lGad~vi~~~ 86 (189)
T d1gu7a2 24 VKLTPGKDWFIQNGGTSAVGKYASQIGKL-LNFNSISVIRDRPNLDEVVASLKELGATQVITED 86 (189)
T ss_dssp SCCCTTTCEEEESCTTSHHHHHHHHHHHH-HTCEEEEEECCCTTHHHHHHHHHHHTCSEEEEHH
T ss_pred hCCCCCCEEEEEeCCCchHHHHHHHHHhh-cCCeEEEEEecccccchHHhhhhhccccEEEecc
Confidence 379999998887 3444 55666666655 5776654 45556678888889999999998764
No 29
>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}
Probab=30.80 E-value=1.2e+02 Score=24.81 Aligned_cols=63 Identities=14% Similarity=0.049 Sum_probs=43.8
Q ss_pred HHHhC-CCCCCCEEEEEccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECcc
Q 004977 146 GLVNF-GHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSK 211 (721)
Q Consensus 146 ~L~~~-Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~ 211 (721)
.|.+. .+++||+|.|....+---.++..-+-..|+.++-+.. +++ -...+++.+++.+|...+
T Consensus 20 al~~~~~v~~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~--~~~-~~~~~~~~Ga~~vi~~~~ 83 (182)
T d1v3va2 20 GLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAG--SDE-KIAYLKQIGFDAAFNYKT 83 (182)
T ss_dssp HHHTTTCCCSSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES--SHH-HHHHHHHTTCSEEEETTS
T ss_pred HHHHHhCCCCCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCC--CHH-HHHHHHhhhhhhhccccc
Confidence 44444 7899999999999885555555555677887776643 334 356677788888876543
No 30
>d2bhsa1 c.79.1.1 (A:2-293) O-acetylserine sulfhydrylase (Cysteine synthase) {Escherichia coli, isoform B (CysM) [TaxId: 562]}
Probab=30.41 E-value=92 Score=27.85 Aligned_cols=67 Identities=6% Similarity=-0.103 Sum_probs=49.0
Q ss_pred HHHhCCCCCCCEEEEEccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECccc
Q 004977 146 GLVNFGHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQ 212 (721)
Q Consensus 146 ~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~ 212 (721)
.+.+.|........+....+-.-+.+-++|.++|..++.+-|...+......++..+++++++....
T Consensus 50 ~a~~~g~~~~~~~vv~aSsGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~v~~~~ 116 (292)
T d2bhsa1 50 EAEKRGEIKPGDVLIEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERRAAMRAYGAELILVTKEQ 116 (292)
T ss_dssp HHHHTTSCCTTSEEEEECCSHHHHHHHHHHHHHTCEEEEEEESCCCHHHHHHHHHTTCEEEEECTTT
T ss_pred HHHHhCCcCCCceeeeecccchhHHHHHHHHhcCcceEeeeccCchhhhhHHHHHhCCCcceeeccc
Confidence 3445564444456666677777788888999999888777666666666688999999999987543
No 31
>d1o69a_ c.67.1.4 (A:) Aminotransferase homolog WlaK (PglE, Cj1121c) {Campylobacter jejuni [TaxId: 197]}
Probab=29.81 E-value=32 Score=32.49 Aligned_cols=45 Identities=11% Similarity=-0.023 Sum_probs=34.8
Q ss_pred HHHHHHHHhCCCCCCCEEEEEccCcHhHHHHHHHHHhcCCEEEEecCC
Q 004977 141 CSFASGLVNFGHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSS 188 (721)
Q Consensus 141 ~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~ 188 (721)
..+-.+|+.+|+++||.|.+=.- -+..+.-++..+|+.++.+|..
T Consensus 47 ~Al~lal~~l~~~~gdeVi~p~~---t~~a~~~~~~~~g~~pv~~Di~ 91 (374)
T d1o69a_ 47 AALHLALRVAGVKQDDIVLASSF---TFIASVAPICYLKAKPVFIDCD 91 (374)
T ss_dssp HHHHHHHHHTTCCTTCEEEEESS---SCGGGTHHHHHTTCEEEEECBC
T ss_pred HHHHHHHHHcCCCCcCEEEeCCc---chHhhHHHHhhccceeEecccc
Confidence 34556677889999999877443 4456678889999999999765
No 32
>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}
Probab=29.30 E-value=1.3e+02 Score=24.08 Aligned_cols=58 Identities=10% Similarity=0.015 Sum_probs=39.6
Q ss_pred CCCCCCEEEEEccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEECcc
Q 004977 151 GHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSK 211 (721)
Q Consensus 151 Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~ 211 (721)
.+++|+.|.|...-..-..++.++..+-+..++..+.+ ++++ ..+++.+++.++...+
T Consensus 29 ~~~~g~~vli~GaG~vG~~~~~~a~~~g~~~vv~~~~~--~~k~-~~~~~~ga~~~i~~~~ 86 (172)
T d1h2ba2 29 TLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVK--EEKL-KLAERLGADHVVDARR 86 (172)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESS--HHHH-HHHHHTTCSEEEETTS
T ss_pred ccCCCCEEEEeCCChHHHHHHHHHHhhcCcccccccch--hHHH-HHHhhcccceeecCcc
Confidence 47999999999987777777777766555566655443 3444 4566677877776543
No 33
>d2cfxa2 d.58.4.2 (A:64-140) Transcriptional regulator LrpC {Bacillus subtilis [TaxId: 1423]}
Probab=28.97 E-value=79 Score=21.73 Aligned_cols=37 Identities=11% Similarity=0.090 Sum_probs=28.5
Q ss_pred chHHHHHHhcCcccceEEEEecCCCceEEEEEEcChHH
Q 004977 596 LGKVEAALISSDYVDNIMIHADPFHNYCVALVVPSHKA 633 (721)
Q Consensus 596 p~eIE~~l~~~p~V~~~~V~g~~~~~~~~a~vv~~~~~ 633 (721)
..++++.+.++|.|.+|.-+.-+ ..+++-+.+++.+.
T Consensus 15 ~~~~~~~i~~~peV~e~~~vtG~-~D~il~v~~~d~~~ 51 (77)
T d2cfxa2 15 YERFKSYIQTLPNIEFCYRIAGA-ACYMLKINAESLEA 51 (77)
T ss_dssp HHHHHHHHHTCTTEEEEEEEESS-SSEEEEEEESSHHH
T ss_pred HHHHHHHHhcCchheEEEEEcCC-CCEEEEEEECCHHH
Confidence 57899999999999999887643 55666666776543
No 34
>d1uara2 c.46.1.2 (A:145-285) Sulfurtransferase {Thermus thermophilus [TaxId: 274]}
Probab=27.93 E-value=37 Score=27.08 Aligned_cols=45 Identities=9% Similarity=-0.031 Sum_probs=34.7
Q ss_pred HHHHHHHhCCCCCCCEEEEEccCcHhHHHHHHHHHh-cCCEEEEec
Q 004977 142 SFASGLVNFGHNVDTRAAILAETCVEWFIAFQGCFR-QSITVVTIY 186 (721)
Q Consensus 142 ~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~-~G~~~vpl~ 186 (721)
.+...+...|+.+++.|.++|..+...-.+++++.. +|..-|-++
T Consensus 76 ~~~~~~~~~gi~~d~~vV~yC~~G~~As~~~~~l~~~~G~~~v~~y 121 (141)
T d1uara2 76 ELRALYEPLGITKDKDIVVYCRIAERSSHSWFVLKYLLGYPHVKNY 121 (141)
T ss_dssp HHHHHHGGGTCCTTSEEEEECSSHHHHHHHHHHHHTTSCCSCEEEE
T ss_pred HHHHHHHHhCCCCCCeEEEEecCcchHHHHHHHHHHHcCCCCeeEe
Confidence 445556678999999999999998888788888765 787645443
No 35
>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}
Probab=27.55 E-value=1.2e+02 Score=24.52 Aligned_cols=61 Identities=8% Similarity=0.021 Sum_probs=37.8
Q ss_pred HHHHhCCCCCCCEEEEEccCcHhHHHHHHHHHhcCCE-EEEecCCCCHHHHHHHHHhcCceEEEEC
Q 004977 145 SGLVNFGHNVDTRAAILAETCVEWFIAFQGCFRQSIT-VVTIYSSLGEDALIHSLNETQVTTLICD 209 (721)
Q Consensus 145 ~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~-~vpl~~~~~~~~l~~~l~~~~~~~vi~~ 209 (721)
..++...+++|+.|+|+..-..-..++.+|-. .|+. ++..+. .++++ ...++.++..+|-.
T Consensus 19 a~~~~~~~~~g~~VlI~G~G~iG~~~~~~ak~-~g~~~v~~~~~--~~~k~-~~a~~~Ga~~~i~~ 80 (174)
T d1f8fa2 19 ACINALKVTPASSFVTWGAGAVGLSALLAAKV-CGASIIIAVDI--VESRL-ELAKQLGATHVINS 80 (174)
T ss_dssp HHHTTTCCCTTCEEEEESCSHHHHHHHHHHHH-HTCSEEEEEES--CHHHH-HHHHHHTCSEEEET
T ss_pred HHHHhhCCCCCCEEEEeCCCHHHhhhhhcccc-cccceeeeecc--HHHHH-HHHHHcCCeEEEeC
Confidence 33555689999999999885566666666544 4554 344443 33444 44566777666643
No 36
>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}
Probab=27.14 E-value=1.1e+02 Score=25.03 Aligned_cols=63 Identities=10% Similarity=0.064 Sum_probs=42.5
Q ss_pred HHHHhC-CCCCCCEEEEEccCcHhHHHHHHHHHhcCC-EEEEecCCCCHHHHHHHHHhcCceEEEECcc
Q 004977 145 SGLVNF-GHNVDTRAAILAETCVEWFIAFQGCFRQSI-TVVTIYSSLGEDALIHSLNETQVTTLICDSK 211 (721)
Q Consensus 145 ~~L~~~-Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~-~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~ 211 (721)
+.|.+. .+++||+|.|+..-..-.+++.+|- ..|+ .++.++. .++++ .++++.+++.+|...+
T Consensus 18 ~al~~~~~~~~G~~VlV~GaG~iG~~~~~~ak-~~Ga~~Vi~~~~--~~~~~-~~a~~lGa~~vi~~~~ 82 (182)
T d1vj0a2 18 HAFDEYPESFAGKTVVIQGAGPLGLFGVVIAR-SLGAENVIVIAG--SPNRL-KLAEEIGADLTLNRRE 82 (182)
T ss_dssp HHHHTCSSCCBTCEEEEECCSHHHHHHHHHHH-HTTBSEEEEEES--CHHHH-HHHHHTTCSEEEETTT
T ss_pred HHHHHHhCCCCCCEEEEECCCccchhheeccc-cccccccccccc--ccccc-cccccccceEEEeccc
Confidence 344555 5899999999987666777777765 5687 4555544 44554 4557788888775543
No 37
>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=27.09 E-value=1.4e+02 Score=23.72 Aligned_cols=61 Identities=10% Similarity=0.010 Sum_probs=39.6
Q ss_pred HHHhCCCCCCCEEEEEccCcHh-HHHHHHHHHhcCC-EEEEecCCCCHHHHHHHHHhcCceEEEECc
Q 004977 146 GLVNFGHNVDTRAAILAETCVE-WFIAFQGCFRQSI-TVVTIYSSLGEDALIHSLNETQVTTLICDS 210 (721)
Q Consensus 146 ~L~~~Gv~~gd~V~i~~~n~~e-~~~~~lA~~~~G~-~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~ 210 (721)
.|++.++++||.|.|+...+.- .++++++. ..|. .++.++.+ +++ ..++++.+++.++...
T Consensus 19 al~~~~~~~g~~vlV~G~~G~vG~~~~~~~~-~~g~~~V~~~~~~--~~~-~~~~~~~Ga~~~i~~~ 81 (170)
T d1jvba2 19 AVRKASLDPTKTLLVVGAGGGLGTMAVQIAK-AVSGATIIGVDVR--EEA-VEAAKRAGADYVINAS 81 (170)
T ss_dssp HHHHTTCCTTCEEEEETTTSHHHHHHHHHHH-HHTCCEEEEEESS--HHH-HHHHHHHTCSEEEETT
T ss_pred HHHHhCCCCCCEEEEEeccccceeeeeeccc-ccccccccccccc--hhh-HHHHHHcCCceeeccC
Confidence 4566789999999999976654 44444555 4564 55555443 333 4556677888777544
No 38
>d1zjca1 e.60.1.1 (A:3-415) Aminopeptidase S, AMPS {Staphylococcus aureus [TaxId: 1280]}
Probab=26.56 E-value=69 Score=30.71 Aligned_cols=51 Identities=12% Similarity=0.076 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHHhC--CCCCCCEEEEEccCc-HhHHHH-HHHHHhcCCEEEEec
Q 004977 136 VFDRACSFASGLVNF--GHNVDTRAAILAETC-VEWFIA-FQGCFRQSITVVTIY 186 (721)
Q Consensus 136 l~~~v~~lA~~L~~~--Gv~~gd~V~i~~~n~-~e~~~~-~lA~~~~G~~~vpl~ 186 (721)
+.++.+++|..|.+. .+++|+.|.|.++.. .+++-+ .-++.++|+.+|.+.
T Consensus 2 f~~~L~k~A~llV~~~l~vqkGe~VlI~a~~~~~~lvral~~~a~~aGA~pV~v~ 56 (413)
T d1zjca1 2 YKEKLQQYAELLVKVGMNVQPKQPVFIRSSVETLELTHLIVEEAYHCGASDVRVV 56 (413)
T ss_dssp HHHHHHHHHHHHHHTTTCCCTTCCEEEEEETTCHHHHHHHHHHHHHTTCCSEEEE
T ss_pred HHHHHHHHHHHHHHHhccCCCCCEEEEEecCchHHHHHHHHHHHHHcCCceEEEe
Confidence 567888899999865 789999999988764 444433 346788999776553
No 39
>d1c4oa2 c.37.1.19 (A:410-583) Nucleotide excision repair enzyme UvrB {Thermus thermophilus [TaxId: 274]}
Probab=26.14 E-value=1.2e+02 Score=24.87 Aligned_cols=78 Identities=9% Similarity=-0.078 Sum_probs=56.8
Q ss_pred CCCCEEEEEccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHH---HhcCceEEEECccchhHHHhhhhcCCCccEE
Q 004977 153 NVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSL---NETQVTTLICDSKQLKKLSAVSSSLKTIKNV 229 (721)
Q Consensus 153 ~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l---~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~i 229 (721)
.+|.++.|++.+-...-...-..-..|..+..++..++..+-..++ ..-+.+++++..-...- -.+|.+..+
T Consensus 29 ~~g~r~lvfc~t~~~~~~l~~~L~~~Gi~a~~~Hg~~~~~eR~~~l~~F~~G~~~vLVaT~v~~~G-----iDip~V~~V 103 (174)
T d1c4oa2 29 ARGERTLVTVLTVRMAEELTSFLVEHGIRARYLHHELDAFKRQALIRDLRLGHYDCLVGINLLREG-----LDIPEVSLV 103 (174)
T ss_dssp HTTCEEEEECSSHHHHHHHHHHHHHTTCCEEEECTTCCHHHHHHHHHHHHTTSCSEEEESCCCCTT-----CCCTTEEEE
T ss_pred hcCCcEEEEEcchhHHHHHHHHHHhcCCceEEEecccchHHHHHHHHHHHCCCeEEEEeeeeeeee-----ccCCCCcEE
Confidence 4688999999987555555555557899999999999987666555 45578888887654332 246888888
Q ss_pred EEecCC
Q 004977 230 IYFEND 235 (721)
Q Consensus 230 i~~~~~ 235 (721)
+.++..
T Consensus 104 i~~~~~ 109 (174)
T d1c4oa2 104 AILDAD 109 (174)
T ss_dssp EETTTT
T ss_pred EEeccc
Confidence 887654
No 40
>d1s2ma2 c.37.1.19 (A:252-422) Putative ATP-dependent RNA helicase DHH1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=25.29 E-value=1.6e+02 Score=23.64 Aligned_cols=90 Identities=10% Similarity=0.129 Sum_probs=59.4
Q ss_pred HHHHHHHHHHHhCCCCCCCEEEEEccCcHhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHH---HhcCceEEEECccchh
Q 004977 138 DRACSFASGLVNFGHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSL---NETQVTTLICDSKQLK 214 (721)
Q Consensus 138 ~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l---~~~~~~~vi~~~~~~~ 214 (721)
++...+...|.+. ++.++.|++......-.....+...|..+..++...+..+-..++ .....+++++++....
T Consensus 18 ~K~~~L~~ll~~~---~~~k~iVF~~~~~~~~~l~~~L~~~g~~~~~~h~~~~~~~r~~~~~~f~~~~~~ilv~Td~~~~ 94 (171)
T d1s2ma2 18 QKLHCLNTLFSKL---QINQAIIFCNSTNRVELLAKKITDLGYSCYYSHARMKQQERNKVFHEFRQGKVRTLVCSDLLTR 94 (171)
T ss_dssp GHHHHHHHHHHHS---CCSEEEEECSSHHHHHHHHHHHHHHTCCEEEECTTSCHHHHHHHHHHHHTTSSSEEEESSCSSS
T ss_pred HHHHHHHHHHHhC---CCCceEEEEeeeehhhHhHHhhhcccccccccccccchhhhhhhhhhcccCccccccchhHhhh
Confidence 4666677777765 566899998775433333333445588888899888876555544 5667889999875432
Q ss_pred HHHhhhhcCCCccEEEEecCC
Q 004977 215 KLSAVSSSLKTIKNVIYFEND 235 (721)
Q Consensus 215 ~~~~~~~~~~~~~~ii~~~~~ 235 (721)
- -.+|.+..+|.++..
T Consensus 95 G-----id~~~v~~VI~~d~p 110 (171)
T d1s2ma2 95 G-----IDIQAVNVVINFDFP 110 (171)
T ss_dssp S-----CCCTTEEEEEESSCC
T ss_pred c-----cccceeEEEEecCCc
Confidence 2 245778888876644
No 41
>d1mdoa_ c.67.1.4 (A:) Aminotransferase ArnB {Salmonella typhimurium [TaxId: 90371]}
Probab=25.21 E-value=82 Score=29.20 Aligned_cols=64 Identities=11% Similarity=0.078 Sum_probs=46.3
Q ss_pred HHHHHHHhCCCCCCCEEEEEccCcHhHHHHHHHHHhcCCEEEEecCC-----CCHHHHHHHHHhcCceEEEEC
Q 004977 142 SFASGLVNFGHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSS-----LGEDALIHSLNETQVTTLICD 209 (721)
Q Consensus 142 ~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~-----~~~~~l~~~l~~~~~~~vi~~ 209 (721)
.+...|..+++++||.|.+-...++ ....|+..+|+.++.++.. ...+.+...++. +.++|+..
T Consensus 58 Al~~al~al~~~~gdeVi~~~~~~~---~~~~ai~~~g~~pv~~d~~~~~~~~d~~~l~~~i~~-~tkaIi~~ 126 (376)
T d1mdoa_ 58 GMHIALMALGIGEGDEVITPSMTWV---STLNMIVLLGANPVMVDVDRDTLMVTPEHIEAAITP-QTKAIIPV 126 (376)
T ss_dssp HHHHHHHHTTCCTTCEEEEESSSCH---HHHHHHHHTTCEEEEECBCTTTCCBCHHHHHHHCCT-TEEEECCB
T ss_pred HHHHHHHHhCCCCCCEEEEeccccc---ccccchhccccceeeecccccccCCCHHHHHHhcCC-CCeEEEEe
Confidence 4556677889999999988776554 4556678899998887543 467888888765 45666553
No 42
>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}
Probab=24.79 E-value=1.1e+02 Score=24.75 Aligned_cols=59 Identities=7% Similarity=0.044 Sum_probs=37.6
Q ss_pred HHhCCCCCCCEEEEEccCcHhHHHHHHHHHhcCC-EEEEecCCCCHHHHHHHHHhcCceEEEEC
Q 004977 147 LVNFGHNVDTRAAILAETCVEWFIAFQGCFRQSI-TVVTIYSSLGEDALIHSLNETQVTTLICD 209 (721)
Q Consensus 147 L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~-~~vpl~~~~~~~~l~~~l~~~~~~~vi~~ 209 (721)
++..++++||.|+|+..-..-.. +.+.+-..|+ .++.++.+ +++ ....++.++..+|-.
T Consensus 20 ~~~a~~~~g~~VlI~GaG~vGl~-~~q~ak~~Ga~~Vi~~d~~--~~r-~~~a~~lGa~~~i~~ 79 (174)
T d1jqba2 20 AELADIEMGSSVVVIGIGAVGLM-GIAGAKLRGAGRIIGVGSR--PIC-VEAAKFYGATDILNY 79 (174)
T ss_dssp HHHTTCCTTCCEEEECCSHHHHH-HHHHHHTTTCSCEEEECCC--HHH-HHHHHHHTCSEEECG
T ss_pred HHHhCCCCCCEEEEEcCCcchhh-hhhhhhcccccccccccch--hhh-HHHHHhhCccccccc
Confidence 45668999999999876444544 4444456887 45556543 444 344566777776643
No 43
>d1amua_ e.23.1.1 (A:) Phenylalanine activating domain of gramicidin synthetase 1 {Bacillus brevis [TaxId: 1393]}
Probab=24.48 E-value=56 Score=31.97 Aligned_cols=97 Identities=11% Similarity=0.050 Sum_probs=64.5
Q ss_pred CCCCeEEEEeccCCCCCcchheeccHHHHHHHHHHHhhC--CCCCCCcEEEeccChHHHHHHHHHHHHHHhcceEeeCcc
Q 004977 273 SQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLI--PNPGRSDVYLAYLPLAHVLELAAESIMLCAGCAIGYGST 350 (721)
Q Consensus 273 ~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~--~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~~~~~~ 350 (721)
.||.+|++.- +-.+|.+.+...+..+...+ .++.++|++...+|-...+ +...+.++..|+..+..++
T Consensus 36 ~Pd~~Al~~~---------~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~~~-v~~~la~~~~G~v~v~l~~ 105 (514)
T d1amua_ 36 RPNNVAIVCE---------NEQLTYHELNVKANQLARIFIEKGIGKDTLVGIMMEKSIDL-FIGILAVLKAGGAYVPIDI 105 (514)
T ss_dssp CTTSEEEEET---------TEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHH-HHHHHHHHHTTCEEEECCT
T ss_pred CCCCeEEEEC---------CeeEcHHHHHHHHHHHHHHHHHcCcCCcCEEEEEeCCCHHH-HHHHHHHHHhCcEEEEeCC
Confidence 5788887741 23689999888777665443 3889999998888876533 3345777889998887554
Q ss_pred ccccccchhhccCccCcceeecceEEeechHHHHHH
Q 004977 351 LTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRV 386 (721)
Q Consensus 351 ~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l 386 (721)
..-.+. +...+...+++.++..+.....+
T Consensus 106 ~~~~~~-------l~~~l~~~~~~~li~~~~~~~~~ 134 (514)
T d1amua_ 106 EYPKER-------IQYILDDSQARMLLTQKHLVHLI 134 (514)
T ss_dssp TSCHHH-------HHHHHHHHTCSEEEECGGGHHHH
T ss_pred CCCHHH-------HHHHHhccCCcEEEEehhhhhhh
Confidence 432222 11226777888888877665544
No 44
>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}
Probab=23.82 E-value=1.2e+02 Score=24.57 Aligned_cols=59 Identities=14% Similarity=0.099 Sum_probs=37.9
Q ss_pred HHhCCCCCCCEEEEEccCcHhHHHHHHHHHhcCC-EEEEecCCCCHHHHHHHHHhcCceEEEEC
Q 004977 147 LVNFGHNVDTRAAILAETCVEWFIAFQGCFRQSI-TVVTIYSSLGEDALIHSLNETQVTTLICD 209 (721)
Q Consensus 147 L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~-~~vpl~~~~~~~~l~~~l~~~~~~~vi~~ 209 (721)
++..++++||.|+|+.. +.-=+.+.+.+-..|+ .++.++.+- +++ .+.++.+++.+|-.
T Consensus 20 ~~~a~~~~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~--~kl-~~a~~lGa~~~i~~ 79 (174)
T d1p0fa2 20 VNTAKVTPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHK--DKF-PKAIELGATECLNP 79 (174)
T ss_dssp HTTTCCCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCG--GGH-HHHHHTTCSEEECG
T ss_pred HHhhCCCCCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChH--HHH-HHHHHcCCcEEEcC
Confidence 34458999999999986 5444445555555664 566666542 333 34466788888753
No 45
>d1zl0a2 c.23.16.7 (A:3-169) LD-carboxypeptidase A, N-terminal domain {Pseudomonas aeruginosa [TaxId: 287]}
Probab=23.54 E-value=86 Score=25.65 Aligned_cols=14 Identities=29% Similarity=0.408 Sum_probs=12.1
Q ss_pred CCC-CCEEEEEccCc
Q 004977 152 HNV-DTRAAILAETC 165 (721)
Q Consensus 152 v~~-gd~V~i~~~n~ 165 (721)
++| ||+|+|++|.+
T Consensus 9 ~~P~Gd~I~iiAPS~ 23 (167)
T d1zl0a2 9 WQPIDGRVALIAPAS 23 (167)
T ss_dssp CCCCCSEEEEECCSB
T ss_pred CCCCCCEEEEEeCCC
Confidence 567 99999999986
No 46
>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}
Probab=23.18 E-value=1.1e+02 Score=24.93 Aligned_cols=60 Identities=8% Similarity=0.015 Sum_probs=40.1
Q ss_pred HHhCCCCCCCEEEEEccCcHhHHHHHHHHHhcC-CEEEEecCCCCHHHHHHHHHhcCceEEEECc
Q 004977 147 LVNFGHNVDTRAAILAETCVEWFIAFQGCFRQS-ITVVTIYSSLGEDALIHSLNETQVTTLICDS 210 (721)
Q Consensus 147 L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G-~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~ 210 (721)
++..++++||.|+|+.- +.--+.+...+...| ..++.++.+-. + ..+.++.+++.+|-..
T Consensus 22 ~~~~~~~~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~--k-l~~Ak~~GA~~~in~~ 82 (176)
T d1d1ta2 22 VKTGKVKPGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKD--K-FEKAMAVGATECISPK 82 (176)
T ss_dssp HTTSCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGG--G-HHHHHHHTCSEEECGG
T ss_pred HHhhCCCCCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHH--H-HHHHHhcCCcEEECcc
Confidence 34557999999999986 555555555556777 56777776533 3 3356677788777543
No 47
>d1urha2 c.46.1.2 (A:149-268) 3-mercaptopyruvate sulfurtransferase {Escherichia coli [TaxId: 562]}
Probab=22.98 E-value=49 Score=25.03 Aligned_cols=44 Identities=9% Similarity=0.066 Sum_probs=36.5
Q ss_pred HHHHHHHhCCCCCCCEEEEEccCcHhHHHHHHHHHhcCCEEEEe
Q 004977 142 SFASGLVNFGHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTI 185 (721)
Q Consensus 142 ~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl 185 (721)
.+...+...|+.+++.|.++|..+...-.+.+++-.+|..-|-+
T Consensus 69 ~~~~~~~~~g~~~~~~ii~yC~sG~~A~~~~~~L~~lG~~~v~~ 112 (120)
T d1urha2 69 ELDAIFFGRGVSYDKPIIVSCGSGVTAAVVLLALATLDVPNVKL 112 (120)
T ss_dssp HHHHHHHTTTCCSSSCEEEECCSSSTHHHHHHHHHHTTCSSCEE
T ss_pred HhhhhhhhcccCccCceEEEccchhHHHHHHHHHHHcCCCCceE
Confidence 45667778899999999999999999999999999999753433
No 48
>d1rhsa2 c.46.1.2 (A:150-293) Rhodanese {Cow (Bos taurus) [TaxId: 9913]}
Probab=21.62 E-value=52 Score=26.21 Aligned_cols=45 Identities=9% Similarity=-0.029 Sum_probs=36.3
Q ss_pred HHHHHHhCCCCCCCEEEEEccCcHhHHHHHHHHHhcCCEEEEecC
Q 004977 143 FASGLVNFGHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYS 187 (721)
Q Consensus 143 lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~ 187 (721)
+...+.+.|+.+++.|.++|..+.....+++++-.+|..-|-++.
T Consensus 79 l~~~~~~~gi~~~~~iI~yC~sG~~A~~~~~~l~~lG~~~v~~Yd 123 (144)
T d1rhsa2 79 LRAMFEAKKVDLTKPLIATCRKGVTACHIALAAYLCGKPDVAIYD 123 (144)
T ss_dssp HHHHHHHTTCCTTSCEEEECSSSSTHHHHHHHHHHTTCCCCEEES
T ss_pred HHHHHHHcCCCCCCCEEEEecccchHHHHHHHHHHcCCCCCEEeC
Confidence 445567789999999999999998888888889999986555543
No 49
>d1b9ha_ c.67.1.4 (A:) 3-amino-5-hydroxybenzoic acid synthase (AHBA synthase) {Amycolatopsis mediterranei [TaxId: 33910]}
Probab=21.34 E-value=45 Score=31.63 Aligned_cols=63 Identities=16% Similarity=0.161 Sum_probs=42.2
Q ss_pred HHHHHHHhCCCCCCCEEEEEccCcHhHHHHHHHHHhcCCEEEEecCC-----CCHHHHHHHHHhcCceEEEE
Q 004977 142 SFASGLVNFGHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSS-----LGEDALIHSLNETQVTTLIC 208 (721)
Q Consensus 142 ~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~-----~~~~~l~~~l~~~~~~~vi~ 208 (721)
.+-..|..+|+++||.|.+-.-+. ..+..|+..+|+.++.++.. ..++.+...+.. +.++|+.
T Consensus 61 Al~lal~~l~~~~gdeVi~p~~t~---~a~~~ai~~~g~~p~~~d~~~~~~~~d~~~~~~~i~~-~tk~i~~ 128 (384)
T d1b9ha_ 61 ALELALQVMGVGPGTEVIVPAFTF---ISSSQAAQRLGAVTVPVDVDAATYNLDPEAVAAAVTP-RTKVIMP 128 (384)
T ss_dssp HHHHHHHHTTCCTTCEEEEESSSC---THHHHHHHHTTCEEEEECBCTTTCCBCHHHHHHHCCT-TEEEECC
T ss_pred HHHHHHHHcCCCCCCEEEEecccc---ccccccccccccccccccccccccccchhhhcccccc-ccccccc
Confidence 355566778999999987755444 45677899999988887633 456777665533 3444443
Done!