BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004979
(721 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 95/332 (28%), Positives = 164/332 (49%), Gaps = 47/332 (14%)
Query: 415 KLKR---SELEAACEDFSN--IIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSK 469
+LKR EL+ A ++FSN I+G G G VYKG L+ G +AV + + + +
Sbjct: 24 QLKRFSLRELQVASDNFSNKNILGR---GGFGKVYKGRLADGTLVAVK----RLKEERXQ 76
Query: 470 NLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEH- 528
E QF+ +++ +S H+N + L G+C P R++V+ Y NGS+ L +
Sbjct: 77 GGELQFQTEVEMISMAVHRNLLRLRGFCMT--PTERLLVYPYMANGSVASCLRERPESQP 134
Query: 529 -LDWAMRLRIAMGMAYCLEHMH-QLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWN---- 582
LDW R RIA+G A L ++H P I HR++++++I L E++ A + DF
Sbjct: 135 PLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 194
Query: 583 ------NTTAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSI------ENG 630
G A E L T +++V+ +G +L E+ITG+ ++ + ++
Sbjct: 195 KDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDV 254
Query: 631 SLENWASEYLKGEQPLKDIVDPTLK-SFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 689
L +W LK E+ L+ +VD L+ ++++ +E+L+ V C P +RP M +
Sbjct: 255 MLLDWVKGLLK-EKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEV--- 310
Query: 690 LKEITAMEPDGATPKLSPLW--WAELEILSSE 719
+ +E DG L+ W W + E+ +
Sbjct: 311 ---VRMLEGDG----LAERWEEWQKEEMFRQD 335
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 153/302 (50%), Gaps = 35/302 (11%)
Query: 415 KLKR---SELEAACEDF--SNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSK 469
+LKR EL+ A ++F NI+G G G VYKG L+ G +AV + + + ++
Sbjct: 16 QLKRFSLRELQVASDNFXNKNILGR---GGFGKVYKGRLADGXLVAVK----RLKEERTQ 68
Query: 470 NLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEH- 528
E QF+ +++ +S H+N + L G+C P R++V+ Y NGS+ L +
Sbjct: 69 GGELQFQTEVEMISMAVHRNLLRLRGFCMT--PTERLLVYPYMANGSVASCLRERPESQP 126
Query: 529 -LDWAMRLRIAMGMAYCLEHMH-QLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWN---- 582
LDW R RIA+G A L ++H P I HR++++++I L E++ A + DF
Sbjct: 127 PLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 186
Query: 583 ------NTTAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSI------ENG 630
G A E L T +++V+ +G +L E+ITG+ ++ + ++
Sbjct: 187 KDXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDV 246
Query: 631 SLENWASEYLKGEQPLKDIVDPTLK-SFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 689
L +W LK E+ L+ +VD L+ ++++ +E+L+ V C P +RP M +
Sbjct: 247 MLLDWVKGLLK-EKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRM 305
Query: 690 LK 691
L+
Sbjct: 306 LE 307
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 135/278 (48%), Gaps = 27/278 (9%)
Query: 435 FSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADW----SKNLESQFRKKIDTLSKVNHKNF 490
+G G VYKG +++ T+ +VK A ++ L+ QF ++I ++K H+N
Sbjct: 33 MGEGGFGVVYKGYVNN------TTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENL 86
Query: 491 VNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEH-LDWAMRLRIAMGMAYCLEHMH 549
V L+G+ + + +V+ Y PNGSL + L + L W MR +IA G A + +H
Sbjct: 87 VELLGFSSDGDDLC--LVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLH 144
Query: 550 QLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSAAMELLETSA-------- 601
+ HR+++S++I L E + AKISDF + ++ T+A
Sbjct: 145 E--NHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEALR 202
Query: 602 --VDLESNVYSFGTILFEMITG--RISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSF 657
+ +S++YSFG +L E+ITG + E L + E E+ ++D +D +
Sbjct: 203 GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDA 262
Query: 658 QENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITA 695
+E + V C+H +RP ++ + L+E+TA
Sbjct: 263 DSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 300
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 135/278 (48%), Gaps = 27/278 (9%)
Query: 435 FSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADW----SKNLESQFRKKIDTLSKVNHKNF 490
+G G VYKG +++ T+ +VK A ++ L+ QF ++I ++K H+N
Sbjct: 39 MGEGGFGVVYKGYVNN------TTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENL 92
Query: 491 VNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEH-LDWAMRLRIAMGMAYCLEHMH 549
V L+G+ + + +V+ Y PNGSL + L + L W MR +IA G A + +H
Sbjct: 93 VELLGFSSDGDDLC--LVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLH 150
Query: 550 QLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSAAMELLETSA-------- 601
+ HR+++S++I L E + AKISDF + ++ T+A
Sbjct: 151 E--NHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEALR 208
Query: 602 --VDLESNVYSFGTILFEMITG--RISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSF 657
+ +S++YSFG +L E+ITG + E L + E E+ ++D +D +
Sbjct: 209 GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDA 268
Query: 658 QENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITA 695
+E + V C+H +RP ++ + L+E+TA
Sbjct: 269 DSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 135/278 (48%), Gaps = 27/278 (9%)
Query: 435 FSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADW----SKNLESQFRKKIDTLSKVNHKNF 490
+G G VYKG +++ T+ +VK A ++ L+ QF ++I ++K H+N
Sbjct: 39 MGEGGFGVVYKGYVNN------TTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENL 92
Query: 491 VNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEH-LDWAMRLRIAMGMAYCLEHMH 549
V L+G+ + + +V+ Y PNGSL + L + L W MR +IA G A + +H
Sbjct: 93 VELLGFSSDGDDLC--LVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLH 150
Query: 550 QLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSAAMELLETSA-------- 601
+ HR+++S++I L E + AKISDF + ++ T+A
Sbjct: 151 E--NHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEALR 208
Query: 602 --VDLESNVYSFGTILFEMITG--RISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSF 657
+ +S++YSFG +L E+ITG + E L + E E+ ++D +D +
Sbjct: 209 GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDA 268
Query: 658 QENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITA 695
+E + V C+H +RP ++ + L+E+TA
Sbjct: 269 DSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/292 (31%), Positives = 139/292 (47%), Gaps = 33/292 (11%)
Query: 420 ELEAACEDFSN--IIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRK 477
+LE A +F + +IG G G VYKG L G ++A+ K R S +F
Sbjct: 33 DLEEATNNFDHKFLIGH---GVFGKVYKGVLRDGAKVAL-----KRRTPESSQGIEEFET 84
Query: 478 KIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQE--AEHLDWAMRL 535
+I+TLS H + V+LIG+C DE +++++Y NG+L HL+ + + W RL
Sbjct: 85 EIETLSFCRHPHLVSLIGFC--DERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRL 142
Query: 536 RIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT---------- 585
I +G A L ++H T I HR+++S +I L E++ KI+DF T
Sbjct: 143 EICIGAARGLHYLH--TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXV 200
Query: 586 -AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGR--ISYSI--ENGSLENWASEYL 640
G E + +S+VYSFG +LFE++ R I S+ E +L WA E
Sbjct: 201 VKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESH 260
Query: 641 KGEQPLKDIVDPTL-KSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLK 691
Q L+ IVDP L + L + C+ + RPSM + KL+
Sbjct: 261 NNGQ-LEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/292 (31%), Positives = 139/292 (47%), Gaps = 33/292 (11%)
Query: 420 ELEAACEDFSN--IIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRK 477
+LE A +F + +IG G G VYKG L G ++A+ K R S +F
Sbjct: 33 DLEEATNNFDHKFLIGH---GVFGKVYKGVLRDGAKVAL-----KRRTPESSQGIEEFET 84
Query: 478 KIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQE--AEHLDWAMRL 535
+I+TLS H + V+LIG+C DE +++++Y NG+L HL+ + + W RL
Sbjct: 85 EIETLSFCRHPHLVSLIGFC--DERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRL 142
Query: 536 RIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT---------- 585
I +G A L ++H T I HR+++S +I L E++ KI+DF T
Sbjct: 143 EICIGAARGLHYLH--TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXV 200
Query: 586 -AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGR--ISYSI--ENGSLENWASEYL 640
G E + +S+VYSFG +LFE++ R I S+ E +L WA E
Sbjct: 201 VKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESH 260
Query: 641 KGEQPLKDIVDPTL-KSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLK 691
Q L+ IVDP L + L + C+ + RPSM + KL+
Sbjct: 261 NNGQ-LEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 130/276 (47%), Gaps = 27/276 (9%)
Query: 437 DGTVGTVYKGTLSSGVEIAVTSTSVKSRADW----SKNLESQFRKKIDTLSKVNHKNFVN 492
+G G VYKG +++ T+ +VK A ++ L+ QF ++I +K H+N V
Sbjct: 32 EGGFGVVYKGYVNN------TTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVE 85
Query: 493 LIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEH-LDWAMRLRIAMGMAYCLEHMHQL 551
L+G+ + + +V+ Y PNGSL + L + L W R +IA G A + +H+
Sbjct: 86 LLGFSSDGDDLC--LVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLHE- 142
Query: 552 TPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSAAMELLETSA---------- 601
HR+++S++I L E + AKISDF + ++ T+A
Sbjct: 143 -NHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEALRGE 201
Query: 602 VDLESNVYSFGTILFEMITG--RISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQE 659
+ +S++YSFG +L E+ITG + E L + E E+ ++D +D
Sbjct: 202 ITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKXNDADS 261
Query: 660 NVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITA 695
+E V C+H +RP ++ + L+E TA
Sbjct: 262 TSVEAXYSVASQCLHEKKNKRPDIKKVQQLLQEXTA 297
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 131/276 (47%), Gaps = 35/276 (12%)
Query: 420 ELEAACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKI 479
E+EA+ S IGS G+ GTVYKG V + + D + FR ++
Sbjct: 32 EIEASEVMLSTRIGS---GSFGTVYKGKWHGDVAVKILKV-----VDPTPEQFQAFRNEV 83
Query: 480 DTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAM 539
L K H N + +GY +D +V ++ SL++HLH+QE + + + + IA
Sbjct: 84 AVLRKTRHVNILLFMGYMTKD---NLAIVTQWCEGSSLYKHLHVQETKFQMFQL-IDIAR 139
Query: 540 GMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF------SFWNNTTAAK--TGS 591
A ++++H I HR+++S++I+L E KI DF S W+ + + TGS
Sbjct: 140 QTAQGMDYLH--AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGS 197
Query: 592 A------AMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQP 645
+ + + + +S+VYS+G +L+E++TG + YS N + ++ G
Sbjct: 198 VLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQ---IIFMVG--- 251
Query: 646 LKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRP 681
+ P L +N + + ++ +CV ++RP
Sbjct: 252 -RGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERP 286
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 141/298 (47%), Gaps = 40/298 (13%)
Query: 413 VPKLKRSELEAACEDFSNIIGSFSDGTVGTVYKGTLSSGVEI-AVTSTSVKSRADWSKNL 471
+P L +E+E + IG G G V+KG L + A+ S + ++ +
Sbjct: 13 LPTLADNEIE-----YEKQIGK---GGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMI 64
Query: 472 E--SQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHL 529
E +F++++ +S +NH N V L G MV E+ P G L+ L + +A +
Sbjct: 65 EKFQEFQREVFIMSNLNHPNIVKLYGLMHN----PPRMVMEFVPCGDLYHRL-LDKAHPI 119
Query: 530 DWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTE-----DYAAKISDFSFWNNT 584
W+++LR+ + +A +E+M PPI HR+L+S +I+L AK++DFS +
Sbjct: 120 KWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQS 179
Query: 585 TAAKTGS------AAMELL--ETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWA 636
+ +G A E + E + +++ YSF IL+ ++TG G + ++
Sbjct: 180 VHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGE-------GPFDEYS 232
Query: 637 SEYLKGEQPLKDI-VDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 693
+K +++ + PT+ E+ L VI+ C DPK+RP I +L E+
Sbjct: 233 YGKIKFINMIREEGLRPTIP---EDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 102/201 (50%), Gaps = 16/201 (7%)
Query: 430 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKN 489
NI G+ GTV++ G ++AV + D+ ++F +++ + ++ H N
Sbjct: 40 NIKEKIGAGSFGTVHRAEWH-GSDVAV---KILMEQDFHAERVNEFLREVAIMKRLRHPN 95
Query: 490 FVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEA-EHLDWAMRLRIAMGMAYCLEHM 548
V +G + P +V EY GSL+ LH A E LD RL +A +A + ++
Sbjct: 96 IVLFMGAVTQ--PPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYL 153
Query: 549 HQLTPPIAHRNLQSSSIYLTEDYAAKISDF--------SFWNNTTAAKTGS-AAMELLET 599
H PPI HRNL+S ++ + + Y K+ DF +F ++ +AA T A E+L
Sbjct: 154 HNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRD 213
Query: 600 SAVDLESNVYSFGTILFEMIT 620
+ +S+VYSFG IL+E+ T
Sbjct: 214 EPSNEKSDVYSFGVILWELAT 234
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 140/298 (46%), Gaps = 40/298 (13%)
Query: 413 VPKLKRSELEAACEDFSNIIGSFSDGTVGTVYKGTLSSGVEI-AVTSTSVKSRADWSKNL 471
+P L +E+E + IG G G V+KG L + A+ S + ++ +
Sbjct: 13 LPTLADNEIE-----YEKQIGK---GGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMI 64
Query: 472 E--SQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHL 529
E +F++++ +S +NH N V L G MV E+ P G L+ L + +A +
Sbjct: 65 EKFQEFQREVFIMSNLNHPNIVKLYGLMHN----PPRMVMEFVPCGDLYHRL-LDKAHPI 119
Query: 530 DWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTE-----DYAAKISDFSFWNNT 584
W+++LR+ + +A +E+M PPI HR+L+S +I+L AK++DF +
Sbjct: 120 KWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQS 179
Query: 585 TAAKTGS------AAMELL--ETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWA 636
+ +G A E + E + +++ YSF IL+ ++TG G + ++
Sbjct: 180 VHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGE-------GPFDEYS 232
Query: 637 SEYLKGEQPLKDI-VDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 693
+K +++ + PT+ E+ L VI+ C DPK+RP I +L E+
Sbjct: 233 YGKIKFINMIREEGLRPTIP---EDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 140/298 (46%), Gaps = 40/298 (13%)
Query: 413 VPKLKRSELEAACEDFSNIIGSFSDGTVGTVYKGTLSSGVEI-AVTSTSVKSRADWSKNL 471
+P L +E+E + IG G G V+KG L + A+ S + ++ +
Sbjct: 13 LPTLADNEIE-----YEKQIGK---GGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMI 64
Query: 472 E--SQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHL 529
E +F++++ +S +NH N V L G MV E+ P G L+ L + +A +
Sbjct: 65 EKFQEFQREVFIMSNLNHPNIVKLYGLMHN----PPRMVMEFVPCGDLYHRL-LDKAHPI 119
Query: 530 DWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTE-----DYAAKISDFSFWNNT 584
W+++LR+ + +A +E+M PPI HR+L+S +I+L AK++DF +
Sbjct: 120 KWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQS 179
Query: 585 TAAKTGS------AAMELL--ETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWA 636
+ +G A E + E + +++ YSF IL+ ++TG G + ++
Sbjct: 180 VHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGE-------GPFDEYS 232
Query: 637 SEYLKGEQPLKDI-VDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 693
+K +++ + PT+ E+ L VI+ C DPK+RP I +L E+
Sbjct: 233 YGKIKFINMIREEGLRPTIP---EDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 133/277 (48%), Gaps = 35/277 (12%)
Query: 432 IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFV 491
IGS G+ GTVYKG V + + + + + + L++ F+ ++ L K H N +
Sbjct: 20 IGS---GSFGTVYKGKWHGDVAVKMLNVTAPT----PQQLQA-FKNEVGVLRKTRHVNIL 71
Query: 492 NLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQL 551
+GY + + +V ++ SL+ HLH E + + + IA A ++++H
Sbjct: 72 LFMGYSTKPQ---LAIVTQWCEGSSLYHHLHASETK-FEMKKLIDIARQTARGMDYLH-- 125
Query: 552 TPPIAHRNLQSSSIYLTEDYAAKISDF------SFWNNTTAAKTGSAAM--------ELL 597
I HR+L+S++I+L ED KI DF S W+ + + S ++ +
Sbjct: 126 AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 185
Query: 598 ETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSF 657
+++ +S+VY+FG +L+E++TG++ YS N + E + + P L
Sbjct: 186 DSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQII-------EMVGRGSLSPDLSKV 238
Query: 658 QENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEIT 694
+ N + + ++ C+ +RPS I A+++E+
Sbjct: 239 RSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELA 275
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 133/277 (48%), Gaps = 35/277 (12%)
Query: 432 IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFV 491
IGS G+ GTVYKG V + + + + A + L++ F+ ++ L K H N +
Sbjct: 32 IGS---GSFGTVYKGKWHGDVAVKMLNVT----APTPQQLQA-FKNEVGVLRKTRHVNIL 83
Query: 492 NLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQL 551
+GY + + +V ++ SL+ HLH E + + + IA A ++++H
Sbjct: 84 LFMGYSTKPQ---LAIVTQWCEGSSLYHHLHASETK-FEMKKLIDIARQTARGMDYLH-- 137
Query: 552 TPPIAHRNLQSSSIYLTEDYAAKISDF------SFWNNTTAAKTGSAAM--------ELL 597
I HR+L+S++I+L ED KI DF S W+ + + S ++ +
Sbjct: 138 AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQ 197
Query: 598 ETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSF 657
+++ +S+VY+FG +L+E++TG++ YS N + E + + P L
Sbjct: 198 DSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQII-------EMVGRGSLSPDLSKV 250
Query: 658 QENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEIT 694
+ N + + ++ C+ +RPS I A+++E+
Sbjct: 251 RSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELA 287
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 132/277 (47%), Gaps = 35/277 (12%)
Query: 432 IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFV 491
IGS G+ GTVYKG V + + + + + + L++ F+ ++ L K H N +
Sbjct: 32 IGS---GSFGTVYKGKWHGDVAVKMLNVTAPT----PQQLQA-FKNEVGVLRKTRHVNIL 83
Query: 492 NLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQL 551
+GY + +V ++ SL+ HLH E + + + IA A ++++H
Sbjct: 84 LFMGYSTAPQ---LAIVTQWCEGSSLYHHLHASETK-FEMKKLIDIARQTARGMDYLH-- 137
Query: 552 TPPIAHRNLQSSSIYLTEDYAAKISDF------SFWNNTTAAKTGSAAM--------ELL 597
I HR+L+S++I+L ED KI DF S W+ + + S ++ +
Sbjct: 138 AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQ 197
Query: 598 ETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSF 657
+++ +S+VY+FG +L+E++TG++ YS N + E + + P L
Sbjct: 198 DSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQII-------EMVGRGSLSPDLSKV 250
Query: 658 QENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEIT 694
+ N + + ++ C+ +RPS I A+++E+
Sbjct: 251 RSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELA 287
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 99/201 (49%), Gaps = 16/201 (7%)
Query: 430 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKN 489
NI G+ GTV++ G ++AV + D+ ++F +++ + ++ H N
Sbjct: 40 NIKEKIGAGSFGTVHRAEWH-GSDVAV---KILMEQDFHAERVNEFLREVAIMKRLRHPN 95
Query: 490 FVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEA-EHLDWAMRLRIAMGMAYCLEHM 548
V +G + P +V EY GSL+ LH A E LD RL +A +A + ++
Sbjct: 96 IVLFMGAVTQ--PPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYL 153
Query: 549 HQLTPPIAHRNLQSSSIYLTEDYAAKISDFS--------FWNNTTAAKTGS-AAMELLET 599
H PPI HR+L+S ++ + + Y K+ DF F + AA T A E+L
Sbjct: 154 HNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGTPEWMAPEVLRD 213
Query: 600 SAVDLESNVYSFGTILFEMIT 620
+ +S+VYSFG IL+E+ T
Sbjct: 214 EPSNEKSDVYSFGVILWELAT 234
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 133/281 (47%), Gaps = 35/281 (12%)
Query: 432 IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFV 491
IGS G+ GTVYKG V + + + + A + L++ F+ ++ L K H N +
Sbjct: 21 IGS---GSFGTVYKGKWHGDVAVKMLNVT----APTPQQLQA-FKNEVGVLRKTRHVNIL 72
Query: 492 NLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQL 551
+GY + + +V ++ SL+ HLHI E + + + IA A ++++H
Sbjct: 73 LFMGYSTKPQ---LAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLH-- 126
Query: 552 TPPIAHRNLQSSSIYLTEDYAAKISDF------SFWNNTTAAKTGSAAM--------ELL 597
I HR+L+S++I+L ED KI DF S W+ + + S ++ +
Sbjct: 127 AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 186
Query: 598 ETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSF 657
+ + +S+VY+FG +L+E++TG++ YS N + ++ G + + P L
Sbjct: 187 DKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ---IIFMVG----RGYLSPDLSKV 239
Query: 658 QENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEP 698
+ N + + ++ C+ +RP I A ++ + P
Sbjct: 240 RSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSLP 280
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 133/281 (47%), Gaps = 35/281 (12%)
Query: 432 IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFV 491
IGS G+ GTVYKG V + + + + + + L++ F+ ++ L K H N +
Sbjct: 21 IGS---GSFGTVYKGKWHGDVAVKMLNVTAPT----PQQLQA-FKNEVGVLRKTRHVNIL 72
Query: 492 NLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQL 551
+GY + + +V ++ SL+ HLHI E + + + IA A ++++H
Sbjct: 73 LFMGYSTKPQ---LAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLH-- 126
Query: 552 TPPIAHRNLQSSSIYLTEDYAAKISDF------SFWNNTTAAKTGSAAM--------ELL 597
I HR+L+S++I+L ED KI DF S W+ + + S ++ +
Sbjct: 127 AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 186
Query: 598 ETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSF 657
+ + +S+VY+FG +L+E++TG++ YS N + ++ G + + P L
Sbjct: 187 DKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ---IIFMVG----RGYLSPDLSKV 239
Query: 658 QENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEP 698
+ N + + ++ C+ +RP I A ++ + P
Sbjct: 240 RSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSLP 280
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 133/281 (47%), Gaps = 35/281 (12%)
Query: 432 IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFV 491
IGS G+ GTVYKG V + + + + A + L++ F+ ++ L K H N +
Sbjct: 18 IGS---GSFGTVYKGKWHGDVAVKMLNVT----APTPQQLQA-FKNEVGVLRKTRHVNIL 69
Query: 492 NLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQL 551
+GY + + +V ++ SL+ HLHI E + + + IA A ++++H
Sbjct: 70 LFMGYSTKPQ---LAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLH-- 123
Query: 552 TPPIAHRNLQSSSIYLTEDYAAKISDF------SFWNNTTAAKTGSAAM--------ELL 597
I HR+L+S++I+L ED KI DF S W+ + + S ++ +
Sbjct: 124 AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 183
Query: 598 ETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSF 657
+ + +S+VY+FG +L+E++TG++ YS N + ++ G + + P L
Sbjct: 184 DKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ---IIFMVG----RGYLSPDLSKV 236
Query: 658 QENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEP 698
+ N + + ++ C+ +RP I A ++ + P
Sbjct: 237 RSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSLP 277
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 131/274 (47%), Gaps = 35/274 (12%)
Query: 432 IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFV 491
IGS G+ GTVYKG V + + + + + + L++ F+ ++ L K H N +
Sbjct: 16 IGS---GSFGTVYKGKWHGDVAVKMLNVTAPT----PQQLQA-FKNEVGVLRKTRHVNIL 67
Query: 492 NLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQL 551
+GY + + +V ++ SL+ HLHI E + + + IA A ++++H
Sbjct: 68 LFMGYSTKPQ---LAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLH-- 121
Query: 552 TPPIAHRNLQSSSIYLTEDYAAKISDF------SFWNNTTAAKTGSAAM--------ELL 597
I HR+L+S++I+L ED KI DF S W+ + + S ++ +
Sbjct: 122 AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 181
Query: 598 ETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSF 657
+ + +S+VY+FG +L+E++TG++ YS N + ++ G + + P L
Sbjct: 182 DKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ---IIFMVG----RGYLSPDLSKV 234
Query: 658 QENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLK 691
+ N + + ++ C+ +RP I A ++
Sbjct: 235 RSNCPKAMKRLMAECLKKKRDERPLFPQILASIE 268
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 133/281 (47%), Gaps = 35/281 (12%)
Query: 432 IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFV 491
IGS G+ GTVYKG V + + + + A + L++ F+ ++ L K H N +
Sbjct: 36 IGS---GSFGTVYKGKWHGDVAVKMLNVT----APTPQQLQA-FKNEVGVLRKTRHVNIL 87
Query: 492 NLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQL 551
+GY + + +V ++ SL+ HLHI E + + + IA A ++++H
Sbjct: 88 LFMGYSTKPQ---LAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLH-- 141
Query: 552 TPPIAHRNLQSSSIYLTEDYAAKISDF------SFWNNTTAAKTGSAAM--------ELL 597
I HR+L+S++I+L ED KI DF S W+ + + S ++ +
Sbjct: 142 AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQ 201
Query: 598 ETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSF 657
+ + +S+VY+FG +L+E++TG++ YS N + ++ G + + P L
Sbjct: 202 DKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ---IIFMVG----RGYLSPDLSKV 254
Query: 658 QENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEP 698
+ N + + ++ C+ +RP I A ++ + P
Sbjct: 255 RSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSLP 295
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 133/281 (47%), Gaps = 35/281 (12%)
Query: 432 IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFV 491
IGS G+ GTVYKG V + + + + A + L++ F+ ++ L K H N +
Sbjct: 43 IGS---GSFGTVYKGKWHGDVAVKMLNVT----APTPQQLQA-FKNEVGVLRKTRHVNIL 94
Query: 492 NLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQL 551
+GY + + +V ++ SL+ HLHI E + + + IA A ++++H
Sbjct: 95 LFMGYSTKPQ---LAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLH-- 148
Query: 552 TPPIAHRNLQSSSIYLTEDYAAKISDF------SFWNNTTAAKTGSAAM--------ELL 597
I HR+L+S++I+L ED KI DF S W+ + + S ++ +
Sbjct: 149 AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 208
Query: 598 ETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSF 657
+ + +S+VY+FG +L+E++TG++ YS N + ++ G + + P L
Sbjct: 209 DKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ---IIFMVG----RGYLSPDLSKV 261
Query: 658 QENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEP 698
+ N + + ++ C+ +RP I A ++ + P
Sbjct: 262 RSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSLP 302
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 133/281 (47%), Gaps = 35/281 (12%)
Query: 432 IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFV 491
IGS G+ GTVYKG V + + + + A + L++ F+ ++ L K H N +
Sbjct: 44 IGS---GSFGTVYKGKWHGDVAVKMLNVT----APTPQQLQA-FKNEVGVLRKTRHVNIL 95
Query: 492 NLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQL 551
+GY + + +V ++ SL+ HLHI E + + + IA A ++++H
Sbjct: 96 LFMGYSTKPQ---LAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLH-- 149
Query: 552 TPPIAHRNLQSSSIYLTEDYAAKISDF------SFWNNTTAAKTGSAAM--------ELL 597
I HR+L+S++I+L ED KI DF S W+ + + S ++ +
Sbjct: 150 AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQ 209
Query: 598 ETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSF 657
+ + +S+VY+FG +L+E++TG++ YS N + ++ G + + P L
Sbjct: 210 DKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ---IIFMVG----RGYLSPDLSKV 262
Query: 658 QENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEP 698
+ N + + ++ C+ +RP I A ++ + P
Sbjct: 263 RSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSLP 303
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 133/281 (47%), Gaps = 35/281 (12%)
Query: 432 IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFV 491
IGS G+ GTVYKG V + + + + A + L++ F+ ++ L K H N +
Sbjct: 44 IGS---GSFGTVYKGKWHGDVAVKMLNVT----APTPQQLQA-FKNEVGVLRKTRHVNIL 95
Query: 492 NLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQL 551
+GY + + +V ++ SL+ HLHI E + + + IA A ++++H
Sbjct: 96 LFMGYSTKPQ---LAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLH-- 149
Query: 552 TPPIAHRNLQSSSIYLTEDYAAKISDF------SFWNNTTAAKTGSAAM--------ELL 597
I HR+L+S++I+L ED KI DF S W+ + + S ++ +
Sbjct: 150 AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 209
Query: 598 ETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSF 657
+ + +S+VY+FG +L+E++TG++ YS N + ++ G + + P L
Sbjct: 210 DKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ---IIFMVG----RGYLSPDLSKV 262
Query: 658 QENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEP 698
+ N + + ++ C+ +RP I A ++ + P
Sbjct: 263 RSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSLP 303
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 131/274 (47%), Gaps = 35/274 (12%)
Query: 432 IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFV 491
IGS G+ GTVYKG V + + + + + + L++ F+ ++ L K H N +
Sbjct: 16 IGS---GSFGTVYKGKWHGDVAVKMLNVTAPT----PQQLQA-FKNEVGVLRKTRHVNIL 67
Query: 492 NLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQL 551
+GY + + +V ++ SL+ HLHI E + + + IA A ++++H
Sbjct: 68 LFMGYSTKPQ---LAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLH-- 121
Query: 552 TPPIAHRNLQSSSIYLTEDYAAKISDF------SFWNNTTAAKTGSAAM--------ELL 597
I HR+L+S++I+L ED KI DF S W+ + + S ++ +
Sbjct: 122 AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQ 181
Query: 598 ETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSF 657
+ + +S+VY+FG +L+E++TG++ YS N + ++ G + + P L
Sbjct: 182 DKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ---IIFMVG----RGYLSPDLSKV 234
Query: 658 QENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLK 691
+ N + + ++ C+ +RP I A ++
Sbjct: 235 RSNCPKAMKRLMAECLKKKRDERPLFPQILASIE 268
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 132/281 (46%), Gaps = 35/281 (12%)
Query: 432 IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFV 491
IGS G+ GTVYKG V + + + + + + L++ F+ ++ L K H N +
Sbjct: 16 IGS---GSFGTVYKGKWHGDVAVKMLNVTAPT----PQQLQA-FKNEVGVLRKTRHVNIL 67
Query: 492 NLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQL 551
+GY + +V ++ SL+ HLHI E + + + IA A ++++H
Sbjct: 68 LFMGYSTAPQ---LAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLH-- 121
Query: 552 TPPIAHRNLQSSSIYLTEDYAAKISDF------SFWNNTTAAKTGSAAM--------ELL 597
I HR+L+S++I+L ED KI DF S W+ + + S ++ +
Sbjct: 122 AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 181
Query: 598 ETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSF 657
+ + +S+VY+FG +L+E++TG++ YS N + ++ G + + P L
Sbjct: 182 DKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ---IIFMVG----RGYLSPDLSKV 234
Query: 658 QENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEP 698
+ N + + ++ C+ +RP I A ++ + P
Sbjct: 235 RSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSLP 275
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 120/271 (44%), Gaps = 22/271 (8%)
Query: 430 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKN 489
N + ++ G ++KG G +I V V+ DWS F ++ L +H N
Sbjct: 13 NFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVR---DWSTRKSRDFNEECPRLRIFSHPN 68
Query: 490 FVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMH 549
+ ++G C+ ++ + P GSL+ LH +D + ++ A+ MA + +H
Sbjct: 69 VLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLH 128
Query: 550 QLTPPIAHRNLQSSSIYLTEDYAAKIS----DFSFWNNTTAAKTGSAAMELLETSAVDL- 604
L P I L S S+ + ED A+IS FSF + A E L+ D
Sbjct: 129 TLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSPGRMYAPAWVAPEALQKKPEDTN 188
Query: 605 --ESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVL 662
++++SF +L+E++T + ++ + ++E L+G +P + +
Sbjct: 189 RRSADMWSFAVLLWELVTREVPFA-DLSNMEIGMKVALEGLRP----------TIPPGIS 237
Query: 663 EELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 693
+ ++K C++ DP +RP I L+++
Sbjct: 238 PHVSKLMKICMNEDPAKRPKFDMIVPILEKM 268
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 122/276 (44%), Gaps = 43/276 (15%)
Query: 433 GSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVN 492
G F D +G Y+G ++AV + A F + ++++ H N V
Sbjct: 23 GEFGDVMLGD-YRGN-----KVAVKCIKNDATA-------QAFLAEASVMTQLRHSNLVQ 69
Query: 493 LIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLT 552
L+G E E +V EY GSL ++L + L L+ ++ + +E++
Sbjct: 70 LLGVIVE-EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN 128
Query: 553 PPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAK-TGS-----AAMELLETSAVDLES 606
HR+L + ++ ++ED AK+SDF ++ + TG A E L +A +S
Sbjct: 129 --FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREAAFSTKS 186
Query: 607 NVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLE-- 663
+V+SFG +L+E+ + GR+ Y PLKD+V K ++ + +
Sbjct: 187 DVWSFGILLWEIYSFGRVPYP----------------RIPLKDVVPRVEKGYKMDAPDGC 230
Query: 664 --ELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAME 697
+ V+KNC H D RPS + +L+ I E
Sbjct: 231 PPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTHE 266
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 126/292 (43%), Gaps = 41/292 (14%)
Query: 420 ELEAACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKI 479
E++ A IIG G G VY+ G E+AV + D S+ +E+ R++
Sbjct: 3 EIDFAELTLEEIIGI---GGFGKVYRA-FWIGDEVAVKAARHDPDEDISQTIEN-VRQEA 57
Query: 480 DTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHL---HIQEAEHLDWAMRLR 536
+ + H N + L G C + EP +V E++ G L L I ++WA ++
Sbjct: 58 KLFAMLKHPNIIALRGVCLK-EP-NLCLVMEFARGGPLNRVLSGKRIPPDILVNWA--VQ 113
Query: 537 IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTE--------DYAAKISDFSF---WNNTT 585
IA GM Y + + PI HR+L+SS+I + + + KI+DF W+ TT
Sbjct: 114 IARGMNYLHD---EAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTT 170
Query: 586 AAKTGSA----AMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLK 641
A A E++ S S+V+S+G +L+E++TG + + +G + K
Sbjct: 171 KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNK 230
Query: 642 GEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 693
P+ E +C +PDP RPS I +L I
Sbjct: 231 LALPIPSTCPEPFAKLME-----------DCWNPDPHSRPSFTNILDQLTTI 271
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 120/276 (43%), Gaps = 43/276 (15%)
Query: 433 GSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVN 492
G F D +G Y+G ++AV + A F + ++++ H N V
Sbjct: 32 GEFGDVMLGD-YRGN-----KVAVKCIKNDATA-------QAFLAEASVMTQLRHSNLVQ 78
Query: 493 LIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLT 552
L+G E E +V EY GSL ++L + L L+ ++ + +E++
Sbjct: 79 LLGVIVE-EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE--G 135
Query: 553 PPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAK-TGS-----AAMELLETSAVDLES 606
HR+L + ++ ++ED AK+SDF ++ + TG A E L +S
Sbjct: 136 NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKS 195
Query: 607 NVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLE-- 663
+V+SFG +L+E+ + GR+ Y PLKD+V K ++ + +
Sbjct: 196 DVWSFGILLWEIYSFGRVPYP----------------RIPLKDVVPRVEKGYKMDAPDGC 239
Query: 664 --ELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAME 697
+ V+KNC H D RPS + +L+ I E
Sbjct: 240 PPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTHE 275
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 120/276 (43%), Gaps = 43/276 (15%)
Query: 433 GSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVN 492
G F D +G Y+G ++AV + A F + ++++ H N V
Sbjct: 17 GEFGDVMLGD-YRGN-----KVAVKCIKNDATA-------QAFLAEASVMTQLRHSNLVQ 63
Query: 493 LIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLT 552
L+G E E +V EY GSL ++L + L L+ ++ + +E++
Sbjct: 64 LLGVIVE-EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE--G 120
Query: 553 PPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAK-TGS-----AAMELLETSAVDLES 606
HR+L + ++ ++ED AK+SDF ++ + TG A E L +S
Sbjct: 121 NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKS 180
Query: 607 NVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLE-- 663
+V+SFG +L+E+ + GR+ Y PLKD+V K ++ + +
Sbjct: 181 DVWSFGILLWEIYSFGRVPYP----------------RIPLKDVVPRVEKGYKMDAPDGC 224
Query: 664 --ELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAME 697
+ V+KNC H D RPS + +L+ I E
Sbjct: 225 PPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTHE 260
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 119/274 (43%), Gaps = 54/274 (19%)
Query: 456 VTSTSVKS-RADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPFTRMMVFEYSP 513
VT +VK ++D ++ S +++ + + HKN +NL+G C +D P ++ EY+
Sbjct: 60 VTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPL--YVIVEYAS 117
Query: 514 NGSLFEHLHIQEAEHLDWAMR------------------LRIAMGMAYCLEHMHQLTPPI 555
G+L E+L +E L+++ ++A GM Y +
Sbjct: 118 KGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA------SKKC 171
Query: 556 AHRNLQSSSIYLTEDYAAKISDF---------SFWNNTTAAKTGSAAM--ELLETSAVDL 604
HR+L + ++ +TED KI+DF ++ TT + M E L
Sbjct: 172 IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTH 231
Query: 605 ESNVYSFGTILFEMIT--GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVL 662
+S+V+SFG +L+E+ T G + L E + ++P N
Sbjct: 232 QSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKP-------------SNCT 278
Query: 663 EELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAM 696
EL +++++C H P QRP+ + + L I A+
Sbjct: 279 NELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL 312
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 115/274 (41%), Gaps = 46/274 (16%)
Query: 460 SVKSRADWS------KNLESQFRKK-----IDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 508
V +A W K +ES+ +K + LS+VNH N V L G C +V
Sbjct: 23 GVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACLN----PVCLV 78
Query: 509 FEYSPNGSLFEHLHIQE-------AEHLDWAMRLRIAMGMAYCLEHMHQLTP-PIAHRNL 560
EY+ GSL+ LH E A + W L+ + G+AY +H + P + HR+L
Sbjct: 79 MEYAEGGSLYNVLHGAEPLPYYTAAHAMSWC--LQCSQGVAY----LHSMQPKALIHRDL 132
Query: 561 QSSSIYLTEDYAA-KISDFSFWNNTTAAKT---GSAAM---ELLETSAVDLESNVYSFGT 613
+ ++ L KI DF + T GSAA E+ E S + +V+S+G
Sbjct: 133 KPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGI 192
Query: 614 ILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCV 673
IL+E+IT R + G G +P P +K N+ + + ++ C
Sbjct: 193 ILWEVITRRKPFDEIGGPAFRIMWAVHNGTRP------PLIK----NLPKPIESLMTRCW 242
Query: 674 HPDPKQRPSMRGIAAKLKEITAMEPDGATPKLSP 707
DP QRPSM I + + P P P
Sbjct: 243 SKDPSQRPSMEEIVKIMTHLMRYFPGADEPLQYP 276
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 115/274 (41%), Gaps = 46/274 (16%)
Query: 460 SVKSRADWS------KNLESQFRKK-----IDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 508
V +A W K +ES+ +K + LS+VNH N V L G C +V
Sbjct: 22 GVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACLN----PVCLV 77
Query: 509 FEYSPNGSLFEHLHIQE-------AEHLDWAMRLRIAMGMAYCLEHMHQLTP-PIAHRNL 560
EY+ GSL+ LH E A + W L+ + G+AY +H + P + HR+L
Sbjct: 78 MEYAEGGSLYNVLHGAEPLPYYTAAHAMSWC--LQCSQGVAY----LHSMQPKALIHRDL 131
Query: 561 QSSSIYLTEDYAA-KISDFSFWNNTTAAKT---GSAAM---ELLETSAVDLESNVYSFGT 613
+ ++ L KI DF + T GSAA E+ E S + +V+S+G
Sbjct: 132 KPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGI 191
Query: 614 ILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCV 673
IL+E+IT R + G G +P P +K N+ + + ++ C
Sbjct: 192 ILWEVITRRKPFDEIGGPAFRIMWAVHNGTRP------PLIK----NLPKPIESLMTRCW 241
Query: 674 HPDPKQRPSMRGIAAKLKEITAMEPDGATPKLSP 707
DP QRPSM I + + P P P
Sbjct: 242 SKDPSQRPSMEEIVKIMTHLMRYFPGADEPLQYP 275
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 113/270 (41%), Gaps = 22/270 (8%)
Query: 430 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKN 489
N + ++ G ++KG G +I V V+ DWS F ++ L +H N
Sbjct: 13 NFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVR---DWSTRKSRDFNEECPRLRIFSHPN 68
Query: 490 FVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMH 549
+ ++G C+ ++ + P GSL+ LH +D + ++ A+ A +H
Sbjct: 69 VLPVLGACQSPPAPHPTLITHWXPYGSLYNVLHEGTNFVVDQSQAVKFALDXARGXAFLH 128
Query: 550 QLTPPIAHRNLQSSSIYLTEDYAAKIS----DFSFWNNTTAAKTGSAAMELLETSAVDL- 604
L P I L S S+ + ED A+IS FSF + A E L+ D
Sbjct: 129 TLEPLIPRHALNSRSVXIDEDXTARISXADVKFSFQSPGRXYAPAWVAPEALQKKPEDTN 188
Query: 605 --ESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVL 662
++ +SF +L+E++T + ++ + + E L+G +P + +
Sbjct: 189 RRSADXWSFAVLLWELVTREVPFA-DLSNXEIGXKVALEGLRP----------TIPPGIS 237
Query: 663 EELLVVIKNCVHPDPKQRPSMRGIAAKLKE 692
+ + K C + DP +RP I L++
Sbjct: 238 PHVSKLXKICXNEDPAKRPKFDXIVPILEK 267
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 106/234 (45%), Gaps = 30/234 (12%)
Query: 475 FRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMR 534
F + ++++ H N V L+G E E +V EY GSL ++L + L
Sbjct: 233 FLAEASVMTQLRHSNLVQLLGVIVE-EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL 291
Query: 535 LRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAK-TGS-- 591
L+ ++ + +E++ HR+L + ++ ++ED AK+SDF ++ + TG
Sbjct: 292 LKFSLDVCEAMEYLEGNN--FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLP 349
Query: 592 ---AAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLK 647
A E L +S+V+SFG +L+E+ + GR+ Y PLK
Sbjct: 350 VKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYP----------------RIPLK 393
Query: 648 DIVDPTLKSFQENVLE----ELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAME 697
D+V K ++ + + + V+KNC H D RP+ + +L+ I E
Sbjct: 394 DVVPRVEKGYKMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTHE 447
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 118/274 (43%), Gaps = 54/274 (19%)
Query: 456 VTSTSVKS-RADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPFTRMMVFEYSP 513
VT +VK ++D ++ S +++ + + HKN +NL+G C +D P ++ EY+
Sbjct: 52 VTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPL--YVIVEYAS 109
Query: 514 NGSLFEHLHIQEAEHLDWAMR------------------LRIAMGMAYCLEHMHQLTPPI 555
G+L E+L + L+++ ++A GM Y +
Sbjct: 110 KGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA------SKKC 163
Query: 556 AHRNLQSSSIYLTEDYAAKISDF---------SFWNNTTAAKTGSAAM--ELLETSAVDL 604
HR+L + ++ +TED KI+DF ++ TT + M E L
Sbjct: 164 IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTH 223
Query: 605 ESNVYSFGTILFEMIT--GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVL 662
+S+V+SFG +L+E+ T G + L E + ++P N
Sbjct: 224 QSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKP-------------SNCT 270
Query: 663 EELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAM 696
EL +++++C H P QRP+ + + L I A+
Sbjct: 271 NELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL 304
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 118/274 (43%), Gaps = 54/274 (19%)
Query: 456 VTSTSVKS-RADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPFTRMMVFEYSP 513
VT +VK ++D ++ S +++ + + HKN +NL+G C +D P ++ EY+
Sbjct: 60 VTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPL--YVIVEYAS 117
Query: 514 NGSLFEHLHIQEAEHLDWAMR------------------LRIAMGMAYCLEHMHQLTPPI 555
G+L E+L + L+++ ++A GM Y +
Sbjct: 118 KGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA------SKKC 171
Query: 556 AHRNLQSSSIYLTEDYAAKISDF---------SFWNNTTAAKTGSAAM--ELLETSAVDL 604
HR+L + ++ +TED KI+DF ++ TT + M E L
Sbjct: 172 IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTH 231
Query: 605 ESNVYSFGTILFEMIT--GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVL 662
+S+V+SFG +L+E+ T G + L E + ++P N
Sbjct: 232 QSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKP-------------SNCT 278
Query: 663 EELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAM 696
EL +++++C H P QRP+ + + L I A+
Sbjct: 279 NELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL 312
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 118/274 (43%), Gaps = 54/274 (19%)
Query: 456 VTSTSVKS-RADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPFTRMMVFEYSP 513
VT +VK ++D ++ S +++ + + HKN +NL+G C +D P ++ EY+
Sbjct: 53 VTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPL--YVIVEYAS 110
Query: 514 NGSLFEHLHIQEAEHLDWAMR------------------LRIAMGMAYCLEHMHQLTPPI 555
G+L E+L + L+++ ++A GM Y +
Sbjct: 111 KGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA------SKKC 164
Query: 556 AHRNLQSSSIYLTEDYAAKISDF---------SFWNNTTAAKTGSAAM--ELLETSAVDL 604
HR+L + ++ +TED KI+DF ++ TT + M E L
Sbjct: 165 IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTH 224
Query: 605 ESNVYSFGTILFEMIT--GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVL 662
+S+V+SFG +L+E+ T G + L E + ++P N
Sbjct: 225 QSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKP-------------SNCT 271
Query: 663 EELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAM 696
EL +++++C H P QRP+ + + L I A+
Sbjct: 272 NELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL 305
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 118/274 (43%), Gaps = 54/274 (19%)
Query: 456 VTSTSVKS-RADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPFTRMMVFEYSP 513
VT +VK ++D ++ S +++ + + HKN +NL+G C +D P ++ EY+
Sbjct: 49 VTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPL--YVIVEYAS 106
Query: 514 NGSLFEHLHIQEAEHLDWAMR------------------LRIAMGMAYCLEHMHQLTPPI 555
G+L E+L + L+++ ++A GM Y +
Sbjct: 107 KGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA------SKKC 160
Query: 556 AHRNLQSSSIYLTEDYAAKISDF---------SFWNNTTAAKTGSAAM--ELLETSAVDL 604
HR+L + ++ +TED KI+DF ++ TT + M E L
Sbjct: 161 IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTH 220
Query: 605 ESNVYSFGTILFEMIT--GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVL 662
+S+V+SFG +L+E+ T G + L E + ++P N
Sbjct: 221 QSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKP-------------SNCT 267
Query: 663 EELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAM 696
EL +++++C H P QRP+ + + L I A+
Sbjct: 268 NELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL 301
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 118/274 (43%), Gaps = 54/274 (19%)
Query: 456 VTSTSVKS-RADWSKNLESQFRKKIDTLSKVN-HKNFVNLIGYCEEDEPFTRMMVFEYSP 513
VT +VK ++D ++ S +++ + + HKN +NL+G C +D P ++ EY+
Sbjct: 101 VTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPL--YVIVEYAS 158
Query: 514 NGSLFEHLHIQEAEHLDWAMR------------------LRIAMGMAYCLEHMHQLTPPI 555
G+L E+L + L+++ ++A GM Y +
Sbjct: 159 KGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA------SKKC 212
Query: 556 AHRNLQSSSIYLTEDYAAKISDFS---------FWNNTTAAKTGSAAM--ELLETSAVDL 604
HR+L + ++ +TED KI+DF ++ TT + M E L
Sbjct: 213 IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTH 272
Query: 605 ESNVYSFGTILFEMIT--GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVL 662
+S+V+SFG +L+E+ T G + L E + ++P N
Sbjct: 273 QSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKP-------------SNCT 319
Query: 663 EELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAM 696
EL +++++C H P QRP+ + + L I A+
Sbjct: 320 NELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL 353
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 117/274 (42%), Gaps = 54/274 (19%)
Query: 456 VTSTSVKS-RADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPFTRMMVFEYSP 513
VT +VK ++D ++ S +++ + + HKN +NL+G C +D P ++ EY+
Sbjct: 45 VTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPL--YVIVEYAS 102
Query: 514 NGSLFEHLHIQEAEHLDWAMR------------------LRIAMGMAYCLEHMHQLTPPI 555
G+L E+L + L++ ++A GM Y +
Sbjct: 103 KGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA------SKKC 156
Query: 556 AHRNLQSSSIYLTEDYAAKISDF---------SFWNNTTAAKTGSAAM--ELLETSAVDL 604
HR+L + ++ +TED KI+DF ++ TT + M E L
Sbjct: 157 IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTH 216
Query: 605 ESNVYSFGTILFEMIT--GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVL 662
+S+V+SFG +L+E+ T G + L E + ++P N
Sbjct: 217 QSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKP-------------SNCT 263
Query: 663 EELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAM 696
EL +++++C H P QRP+ + + L I A+
Sbjct: 264 NELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL 297
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 117/274 (42%), Gaps = 54/274 (19%)
Query: 456 VTSTSVKS-RADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPFTRMMVFEYSP 513
VT +VK ++D ++ S +++ + + HKN +NL+G C +D P ++ EY+
Sbjct: 60 VTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPL--YVIVEYAS 117
Query: 514 NGSLFEHLHIQEAEHLDWAMR------------------LRIAMGMAYCLEHMHQLTPPI 555
G+L E+L + L++ ++A GM Y +
Sbjct: 118 KGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA------SKKC 171
Query: 556 AHRNLQSSSIYLTEDYAAKISDF---------SFWNNTTAAKTGSAAM--ELLETSAVDL 604
HR+L + ++ +TED KI+DF ++ TT + M E L
Sbjct: 172 IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTH 231
Query: 605 ESNVYSFGTILFEMIT--GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVL 662
+S+V+SFG +L+E+ T G + L E + ++P N
Sbjct: 232 QSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKP-------------SNCT 278
Query: 663 EELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAM 696
EL +++++C H P QRP+ + + L I A+
Sbjct: 279 NELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL 312
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 124/292 (42%), Gaps = 48/292 (16%)
Query: 428 FSNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV- 485
F ++IG +G G V K + G+ + +K A SK+ F +++ L K+
Sbjct: 26 FQDVIG---EGNFGQVLKARIKKDGLRMDAAIKRMKEYA--SKDDHRDFAGELEVLCKLG 80
Query: 486 NHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMR----------- 534
+H N +NL+G CE + EY+P+G+L + L D A
Sbjct: 81 HHPNIINLLGACEHRGYL--YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSS 138
Query: 535 ---LRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF--SFWNNTTAAKT 589
L A +A ++++ Q HRNL + +I + E+Y AKI+DF S KT
Sbjct: 139 QQLLHFAADVARGMDYLSQ--KQFIHRNLAARNILVGENYVAKIADFGLSRGQEVYVKKT 196
Query: 590 GS------AAMELLETSAVDLESNVYSFGTILFEMIT-GRISY-SIENGSLENWASEYLK 641
A+E L S S+V+S+G +L+E+++ G Y + L + +
Sbjct: 197 MGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYR 256
Query: 642 GEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 693
E+PL N +E+ +++ C P +RPS I L +
Sbjct: 257 LEKPL-------------NCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM 295
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 117/274 (42%), Gaps = 54/274 (19%)
Query: 456 VTSTSVKS-RADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPFTRMMVFEYSP 513
VT +VK ++D ++ S +++ + + HKN +NL+G C +D P ++ EY+
Sbjct: 60 VTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPL--YVIVEYAS 117
Query: 514 NGSLFEHLHIQEAEHLDWAMR------------------LRIAMGMAYCLEHMHQLTPPI 555
G+L E+L + L+++ ++A GM Y +
Sbjct: 118 KGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYLA------SKKC 171
Query: 556 AHRNLQSSSIYLTEDYAAKISDFSFWNNT----TAAKTGSA-------AMELLETSAVDL 604
HR+L + ++ +TED KI+DF + KT + A E L
Sbjct: 172 IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTH 231
Query: 605 ESNVYSFGTILFEMIT--GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVL 662
+S+V+SFG +L+E+ T G + L E + ++P N
Sbjct: 232 QSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKP-------------SNCT 278
Query: 663 EELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAM 696
EL +++++C H P QRP+ + + L I A+
Sbjct: 279 NELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL 312
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 128/285 (44%), Gaps = 43/285 (15%)
Query: 430 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKN 489
+I +G G V+ GT + ++A+ + + + S F ++ + K+ H
Sbjct: 12 QLIKRLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPES------FLEEAQIMKKLKHDK 65
Query: 490 FVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWA----MRLRIAMGMAYCL 545
V L E+ + +V EY GSL + L E L M ++A GMAY +
Sbjct: 66 LVQLYAVVSEEPIY---IVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAY-I 121
Query: 546 EHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW----NNTTAAKTGS------AAME 595
E M+ + HR+L+S++I + KI+DF +N A+ G+ A E
Sbjct: 122 ERMNYI-----HRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPE 176
Query: 596 LLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTL 654
++S+V+SFG +L E++T GR+ Y N E L EQ + P
Sbjct: 177 AALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNN------REVL--EQVERGYRMPCP 228
Query: 655 KSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKE-ITAMEP 698
+ + L EL++ +C DP++RP+ + + L++ TA EP
Sbjct: 229 QDCPIS-LHELMI---HCWKKDPEERPTFEYLQSFLEDYFTATEP 269
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 124/292 (42%), Gaps = 48/292 (16%)
Query: 428 FSNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV- 485
F ++IG +G G V K + G+ + +K A SK+ F +++ L K+
Sbjct: 19 FQDVIG---EGNFGQVLKARIKKDGLRMDAAIKRMKEYA--SKDDHRDFAGELEVLCKLG 73
Query: 486 NHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMR----------- 534
+H N +NL+G CE + EY+P+G+L + L D A
Sbjct: 74 HHPNIINLLGACEHRGYL--YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSS 131
Query: 535 ---LRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF--SFWNNTTAAKT 589
L A +A ++++ Q HR+L + +I + E+Y AKI+DF S KT
Sbjct: 132 QQLLHFAADVARGMDYLSQ--KQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKT 189
Query: 590 GS------AAMELLETSAVDLESNVYSFGTILFEMIT-GRISY-SIENGSLENWASEYLK 641
A+E L S S+V+S+G +L+E+++ G Y + L + +
Sbjct: 190 MGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYR 249
Query: 642 GEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 693
E+PL N +E+ +++ C P +RPS I L +
Sbjct: 250 LEKPL-------------NCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM 288
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 124/292 (42%), Gaps = 48/292 (16%)
Query: 428 FSNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV- 485
F ++IG +G G V K + G+ + +K A SK+ F +++ L K+
Sbjct: 29 FQDVIG---EGNFGQVLKARIKKDGLRMDAAIKRMKEYA--SKDDHRDFAGELEVLCKLG 83
Query: 486 NHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMR----------- 534
+H N +NL+G CE + EY+P+G+L + L D A
Sbjct: 84 HHPNIINLLGACEHRGYL--YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSS 141
Query: 535 ---LRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF--SFWNNTTAAKT 589
L A +A ++++ Q HR+L + +I + E+Y AKI+DF S KT
Sbjct: 142 QQLLHFAADVARGMDYLSQ--KQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKT 199
Query: 590 GS------AAMELLETSAVDLESNVYSFGTILFEMIT-GRISY-SIENGSLENWASEYLK 641
A+E L S S+V+S+G +L+E+++ G Y + L + +
Sbjct: 200 MGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYR 259
Query: 642 GEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 693
E+PL N +E+ +++ C P +RPS I L +
Sbjct: 260 LEKPL-------------NCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM 298
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 125/282 (44%), Gaps = 45/282 (15%)
Query: 428 FSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNH 487
F IGS G G V+ G + ++A+ + S + E F ++ + + K++H
Sbjct: 31 FVQEIGS---GQFGLVHLGYWLNKDKVAIKTIKEGSMS------EDDFIEEAEVMMKLSH 81
Query: 488 KNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQE----AEHLDWAMRLRIAMGMAY 543
V L G C E P +VFE+ +G L ++L Q AE L M L + GMAY
Sbjct: 82 PKLVQLYGVCLEQAPIC--LVFEFMEHGCLSDYLRTQRGLFAAETL-LGMCLDVCEGMAY 138
Query: 544 CLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF----WNNTTAAKTGS------AA 593
E + HR+L + + + E+ K+SDF ++ + TG+ A+
Sbjct: 139 LEE------ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWAS 192
Query: 594 MELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDP 652
E+ S +S+V+SFG +++E+ + G+I Y EN S + G + K P
Sbjct: 193 PEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY--ENRSNSEVVEDISTGFRLYK----P 246
Query: 653 TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEIT 694
L S + ++ +C P+ RP+ + +L EI
Sbjct: 247 RLAS------THVYQIMNHCWKERPEDRPAFSRLLRQLAEIA 282
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 127/271 (46%), Gaps = 37/271 (13%)
Query: 450 SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 509
+G E+AV K++ + S +L+ FR+ + + +NH N V L E ++ T +V
Sbjct: 38 TGKEVAVKIID-KTQLN-SSSLQKLFRE-VRIMKVLNHPNIVKLFEVIETEK--TLYLVM 92
Query: 510 EYSPNGSLFEHL--HIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYL 567
EY+ G +F++L H + E A +I + YC HQ I HR+L++ ++ L
Sbjct: 93 EYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYC----HQ--KFIVHRDLKAENLLL 146
Query: 568 TEDYAAKISDFSFWNNTTAAKT-----GS---AAMELLETSAVD-LESNVYSFGTILFEM 618
D KI+DF F N T GS AA EL + D E +V+S G IL+ +
Sbjct: 147 DADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTL 206
Query: 619 ITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ-ENVLEELLVVIKNCVHPDP 677
++G + + +N L+ L+G+ + P S EN+L++ L++ +P
Sbjct: 207 VSGSLPFDGQN--LKELRERVLRGKYRI-----PFYMSTDCENLLKKFLIL-------NP 252
Query: 678 KQRPSMRGIAAKLKEITAMEPDGATPKLSPL 708
+R ++ I E D P ++PL
Sbjct: 253 SKRGTLEQIMKDRWMNVGHEDDELKPYVAPL 283
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 126/285 (44%), Gaps = 51/285 (17%)
Query: 434 SFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNL 493
G G V+ GT + +A+ + + + F ++ + K+ H+ V L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP------EAFLQEAQVMKKLRHEKLVQL 78
Query: 494 IGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWA----MRLRIAMGMAYCLEHMH 549
E+ + +V EY GSL + L + ++L M +IA GMAY +E M+
Sbjct: 79 YAVVSEEPIY---IVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY-VERMN 134
Query: 550 QLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW----NNTTAAKTGS------AAMELLET 599
+ HR+L++++I + E+ K++DF +N A+ G+ A E
Sbjct: 135 YV-----HRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALY 189
Query: 600 SAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 658
++S+V+SFG +L E+ T GR+ Y + N ++++D + ++
Sbjct: 190 GRFTIKSDVWSFGILLTELTTKGRVPYP----GMVN------------REVLDQVERGYR 233
Query: 659 ----ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKE-ITAMEP 698
E L ++ C DP++RP+ + A L++ T+ EP
Sbjct: 234 MPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEP 278
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 127/271 (46%), Gaps = 37/271 (13%)
Query: 450 SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 509
+G E+AV K++ + S +L+ FR+ + + +NH N V L E ++ T +V
Sbjct: 38 TGKEVAVKIID-KTQLN-SSSLQKLFRE-VRIMKVLNHPNIVKLFEVIETEK--TLYLVM 92
Query: 510 EYSPNGSLFEHL--HIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYL 567
EY+ G +F++L H + E A +I + YC HQ I HR+L++ ++ L
Sbjct: 93 EYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYC----HQKF--IVHRDLKAENLLL 146
Query: 568 TEDYAAKISDFSFWN-----NTTAAKTGS---AAMELLETSAVD-LESNVYSFGTILFEM 618
D KI+DF F N N A G+ AA EL + D E +V+S G IL+ +
Sbjct: 147 DADMNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTL 206
Query: 619 ITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ-ENVLEELLVVIKNCVHPDP 677
++G + + +N L+ L+G+ + P S EN+L++ L++ +P
Sbjct: 207 VSGSLPFDGQN--LKELRERVLRGKYRI-----PFYMSTDCENLLKKFLIL-------NP 252
Query: 678 KQRPSMRGIAAKLKEITAMEPDGATPKLSPL 708
+R ++ I E D P + PL
Sbjct: 253 SKRGTLEQIMKDRWMNVGHEDDELKPYVEPL 283
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 125/271 (46%), Gaps = 37/271 (13%)
Query: 450 SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 509
+G E+AV K++ + S +L+ FR+ + +NH N V L E ++ T +V
Sbjct: 38 TGKEVAVKIID-KTQLN-SSSLQKLFRE-VRIXKVLNHPNIVKLFEVIETEK--TLYLVX 92
Query: 510 EYSPNGSLFEHL--HIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYL 567
EY+ G +F++L H + E A +I + YC + I HR+L++ ++ L
Sbjct: 93 EYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQKF------IVHRDLKAENLLL 146
Query: 568 TEDYAAKISDFSFWN-----NTTAAKTGS---AAMELLETSAVD-LESNVYSFGTILFEM 618
D KI+DF F N N A G+ AA EL + D E +V+S G IL+ +
Sbjct: 147 DADXNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTL 206
Query: 619 ITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ-ENVLEELLVVIKNCVHPDP 677
++G + + +N L+ L+G+ + P S EN+L++ L++ +P
Sbjct: 207 VSGSLPFDGQN--LKELRERVLRGKYRI-----PFYXSTDCENLLKKFLIL-------NP 252
Query: 678 KQRPSMRGIAAKLKEITAMEPDGATPKLSPL 708
+R ++ I E D P + PL
Sbjct: 253 SKRGTLEQIXKDRWXNVGHEDDELKPYVEPL 283
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 126/285 (44%), Gaps = 51/285 (17%)
Query: 434 SFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNL 493
G G V+ GT + +A+ + + + F ++ + K+ H+ V L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP------EAFLQEAQVMKKLRHEKLVQL 78
Query: 494 IGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWA----MRLRIAMGMAYCLEHMH 549
E+ + +V EY GSL + L + ++L M +IA GMAY +E M+
Sbjct: 79 YAVVSEEPIY---IVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY-VERMN 134
Query: 550 QLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW----NNTTAAKTGS------AAMELLET 599
+ HR+L++++I + E+ K++DF +N A+ G+ A E
Sbjct: 135 YV-----HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 189
Query: 600 SAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 658
++S+V+SFG +L E+ T GR+ Y + N ++++D + ++
Sbjct: 190 GRFTIKSDVWSFGILLTELTTKGRVPYP----GMVN------------REVLDQVERGYR 233
Query: 659 ----ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKE-ITAMEP 698
E L ++ C DP++RP+ + A L++ T+ EP
Sbjct: 234 MPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEP 278
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 102/241 (42%), Gaps = 52/241 (21%)
Query: 487 HKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRL----------- 535
HKN +NL+G C +D P ++ EY+ G+L E+L + ++++ +
Sbjct: 100 HKNIINLLGACTQDGPL--YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 536 -------RIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF---------S 579
++A GM Y HR+L + ++ +TE+ KI+DF
Sbjct: 158 DLVSCTYQLARGMEYLASQ------KCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 580 FWNNTTAAKTGSAAM--ELLETSAVDLESNVYSFGTILFEMIT--GRISYSIENGSLENW 635
++ NTT + M E L +S+V+SFG +++E+ T G I L
Sbjct: 212 YYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 271
Query: 636 ASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITA 695
E + ++P N EL +++++C H P QRP+ + + L I
Sbjct: 272 LKEGHRMDKP-------------ANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318
Query: 696 M 696
+
Sbjct: 319 L 319
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 126/271 (46%), Gaps = 37/271 (13%)
Query: 450 SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 509
+G E+AV K++ + S +L+ FR+ + + +NH N V L E ++ T +V
Sbjct: 38 TGKEVAVKIID-KTQLN-SSSLQKLFRE-VRIMKVLNHPNIVKLFEVIETEK--TLYLVM 92
Query: 510 EYSPNGSLFEHL--HIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYL 567
EY+ G +F++L H + E A +I + YC HQ I HR+L++ ++ L
Sbjct: 93 EYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYC----HQ--KFIVHRDLKAENLLL 146
Query: 568 TEDYAAKISDFSFWNNTTAAKT-----GS---AAMELLETSAVD-LESNVYSFGTILFEM 618
D KI+DF F N T GS AA EL + D E +V+S G IL+ +
Sbjct: 147 DADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTL 206
Query: 619 ITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ-ENVLEELLVVIKNCVHPDP 677
++G + + +N L+ L+G+ + P S EN+L++ L++ +P
Sbjct: 207 VSGSLPFDGQN--LKELRERVLRGKYRI-----PFYMSTDCENLLKKFLIL-------NP 252
Query: 678 KQRPSMRGIAAKLKEITAMEPDGATPKLSPL 708
+R ++ I E D P + PL
Sbjct: 253 SKRGTLEQIMKDRWMNVGHEDDELKPYVEPL 283
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 126/285 (44%), Gaps = 51/285 (17%)
Query: 434 SFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNL 493
G G V+ GT + +A+ + + + F ++ + K+ H+ V L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP------EAFLQEAQVMKKIRHEKLVQL 78
Query: 494 IGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWA----MRLRIAMGMAYCLEHMH 549
E+ + +V EY GSL + L + ++L M +IA GMAY +E M+
Sbjct: 79 YAVVSEEPIY---IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY-VERMN 134
Query: 550 QLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW----NNTTAAKTGS------AAMELLET 599
+ HR+L++++I + E+ K++DF +N A+ G+ A E
Sbjct: 135 YV-----HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 189
Query: 600 SAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 658
++S+V+SFG +L E+ T GR+ Y + N ++++D + ++
Sbjct: 190 GRFTIKSDVWSFGILLTELTTKGRVPYP----GMVN------------REVLDQVERGYR 233
Query: 659 ----ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKE-ITAMEP 698
E L ++ C DP++RP+ + A L++ T+ EP
Sbjct: 234 MPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEP 278
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 125/271 (46%), Gaps = 37/271 (13%)
Query: 450 SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 509
+G E+AV K++ + S +L+ FR+ + + +NH N V L E ++ T +V
Sbjct: 38 TGKEVAVRIID-KTQLN-SSSLQKLFRE-VRIMKVLNHPNIVKLFEVIETEK--TLYLVM 92
Query: 510 EYSPNGSLFEHL--HIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYL 567
EY+ G +F++L H + E A +I + YC HQ I HR+L++ ++ L
Sbjct: 93 EYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYC----HQ--KFIVHRDLKAENLLL 146
Query: 568 TEDYAAKISDFSFWN--------NTTAAKTGSAAMELLETSAVD-LESNVYSFGTILFEM 618
D KI+DF F N +T AA EL + D E +V+S G IL+ +
Sbjct: 147 DADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTL 206
Query: 619 ITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ-ENVLEELLVVIKNCVHPDP 677
++G + + +N L+ L+G+ + P S EN+L++ L++ +P
Sbjct: 207 VSGSLPFDGQN--LKELRERVLRGKYRI-----PFYMSTDCENLLKKFLIL-------NP 252
Query: 678 KQRPSMRGIAAKLKEITAMEPDGATPKLSPL 708
+R ++ I E D P + PL
Sbjct: 253 SKRGTLEQIMKDRWMNVGHEDDELKPYVEPL 283
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 126/271 (46%), Gaps = 37/271 (13%)
Query: 450 SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 509
+G E+AV K++ + S +L+ FR+ + + +NH N V L E ++ T +V
Sbjct: 38 TGKEVAVRIID-KTQLN-SSSLQKLFRE-VRIMKVLNHPNIVKLFEVIETEK--TLYLVM 92
Query: 510 EYSPNGSLFEHL--HIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYL 567
EY+ G +F++L H + E A +I + YC HQ I HR+L++ ++ L
Sbjct: 93 EYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYC----HQKF--IVHRDLKAENLLL 146
Query: 568 TEDYAAKISDFSFWNNTTAAKT-----GS---AAMELLETSAVD-LESNVYSFGTILFEM 618
D KI+DF F N T GS AA EL + D E +V+S G IL+ +
Sbjct: 147 DADMNIKIADFGFSNEFTFGNKLDEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTL 206
Query: 619 ITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ-ENVLEELLVVIKNCVHPDP 677
++G + + +N L+ L+G+ + P S EN+L++ L++ +P
Sbjct: 207 VSGSLPFDGQN--LKELRERVLRGKYRI-----PFYMSTDCENLLKKFLIL-------NP 252
Query: 678 KQRPSMRGIAAKLKEITAMEPDGATPKLSPL 708
+R ++ I E D P + PL
Sbjct: 253 SKRGTLEQIMKDRWMNVGHEDDELKPYVEPL 283
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 126/282 (44%), Gaps = 45/282 (15%)
Query: 428 FSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNH 487
F IGS G G V+ G + ++A+ + + + E F ++ + + K++H
Sbjct: 14 FVQEIGS---GQFGLVHLGYWLNKDKVAIKTIREGAMS------EEDFIEEAEVMMKLSH 64
Query: 488 KNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQE----AEHLDWAMRLRIAMGMAY 543
V L G C E P +VFE+ +G L ++L Q AE L M L + GMAY
Sbjct: 65 PKLVQLYGVCLEQAPIC--LVFEFMEHGCLSDYLRTQRGLFAAETL-LGMCLDVCEGMAY 121
Query: 544 CLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF----WNNTTAAKTGS------AA 593
E + HR+L + + + E+ K+SDF ++ + TG+ A+
Sbjct: 122 LEE------ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWAS 175
Query: 594 MELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDP 652
E+ S +S+V+SFG +++E+ + G+I Y EN S SE ++ + P
Sbjct: 176 PEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY--ENRS----NSEVVEDISTGFRLYKP 229
Query: 653 TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEIT 694
L S + ++ +C P+ RP+ + +L EI
Sbjct: 230 RLAS------THVYQIMNHCWRERPEDRPAFSRLLRQLAEIA 265
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 126/285 (44%), Gaps = 51/285 (17%)
Query: 434 SFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNL 493
G G V+ GT + +A+ + + + F ++ + K+ H+ V L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP------EAFLQEAQVMKKLRHEKLVQL 78
Query: 494 IGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWA----MRLRIAMGMAYCLEHMH 549
E+ + +V EY GSL + L + ++L M +IA GMAY +E M+
Sbjct: 79 YAVVSEEPIY---IVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY-VERMN 134
Query: 550 QLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW----NNTTAAKTGS------AAMELLET 599
+ HR+L++++I + E+ K++DF +N A+ G+ A E
Sbjct: 135 YV-----HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 189
Query: 600 SAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 658
++S+V+SFG +L E+ T GR+ Y + N ++++D + ++
Sbjct: 190 GRFTIKSDVWSFGILLTELTTKGRVPYP----GMVN------------REVLDQVERGYR 233
Query: 659 ----ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKE-ITAMEP 698
E L ++ C DP++RP+ + A L++ T+ EP
Sbjct: 234 MPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEP 278
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 126/285 (44%), Gaps = 51/285 (17%)
Query: 434 SFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNL 493
G G V+ GT + +A+ + + + F ++ + K+ H+ V L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP------EAFLQEAQVMKKLRHEKLVQL 78
Query: 494 IGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWA----MRLRIAMGMAYCLEHMH 549
E+ + +V EY GSL + L + ++L M +IA GMAY +E M+
Sbjct: 79 YAVVSEEPIY---IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY-VERMN 134
Query: 550 QLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW----NNTTAAKTGS------AAMELLET 599
+ HR+L++++I + E+ K++DF +N A+ G+ A E
Sbjct: 135 YV-----HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 189
Query: 600 SAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 658
++S+V+SFG +L E+ T GR+ Y + N ++++D + ++
Sbjct: 190 GRFTIKSDVWSFGILLTELTTKGRVPYP----GMVN------------REVLDQVERGYR 233
Query: 659 ----ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKE-ITAMEP 698
E L ++ C DP++RP+ + A L++ T+ EP
Sbjct: 234 MPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEP 278
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 116/270 (42%), Gaps = 51/270 (18%)
Query: 459 TSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSL- 517
+VK+ + S++ F+++ + L+ + H++ V G C E P +MVFEY +G L
Sbjct: 74 VAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPL--LMVFEYMRHGDLN 131
Query: 518 -FEHLHIQEAEHLD---------------WAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQ 561
F H +A+ L A+ ++A GM Y L +H HR+L
Sbjct: 132 RFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVY-LAGLH-----FVHRDLA 185
Query: 562 SSSIYLTEDYAAKISDFSFWNN---TTAAKTGSAAM--------ELLETSAVDLESNVYS 610
+ + + + KI DF + T + G M E + ES+V+S
Sbjct: 186 TRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWS 245
Query: 611 FGTILFEMIT-GRIS-YSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVV 668
FG +L+E+ T G+ Y + N + ++ + E+P E+ +
Sbjct: 246 FGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERP-------------RACPPEVYAI 292
Query: 669 IKNCVHPDPKQRPSMRGIAAKLKEITAMEP 698
++ C +P+QR S++ + A+L+ + P
Sbjct: 293 MRGCWQREPQQRHSIKDVHARLQALAQAPP 322
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 126/285 (44%), Gaps = 51/285 (17%)
Query: 434 SFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNL 493
G G V+ GT + +A+ + + + F ++ + K+ H+ V L
Sbjct: 14 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP------EAFLQEAQVMKKLRHEKLVQL 67
Query: 494 IGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWA----MRLRIAMGMAYCLEHMH 549
E+ + +V EY GSL + L + ++L M +IA GMAY +E M+
Sbjct: 68 YAVVSEEPIY---IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY-VERMN 123
Query: 550 QLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW----NNTTAAKTGS------AAMELLET 599
+ HR+L++++I + E+ K++DF +N A+ G+ A E
Sbjct: 124 YV-----HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 178
Query: 600 SAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 658
++S+V+SFG +L E+ T GR+ Y + N ++++D + ++
Sbjct: 179 GRFTIKSDVWSFGILLTELTTKGRVPYP----GMVN------------REVLDQVERGYR 222
Query: 659 ----ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKE-ITAMEP 698
E L ++ C DP++RP+ + A L++ T+ EP
Sbjct: 223 MPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEP 267
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 126/285 (44%), Gaps = 51/285 (17%)
Query: 434 SFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNL 493
G G V+ GT + +A+ + + + F ++ + K+ H+ V L
Sbjct: 16 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP------EAFLQEAQVMKKLRHEKLVQL 69
Query: 494 IGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWA----MRLRIAMGMAYCLEHMH 549
E+ + +V EY GSL + L + ++L M +IA GMAY +E M+
Sbjct: 70 YAVVSEEPIY---IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY-VERMN 125
Query: 550 QLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW----NNTTAAKTGS------AAMELLET 599
+ HR+L++++I + E+ K++DF +N A+ G+ A E
Sbjct: 126 YV-----HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 180
Query: 600 SAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 658
++S+V+SFG +L E+ T GR+ Y + N ++++D + ++
Sbjct: 181 GRFTIKSDVWSFGILLTELTTKGRVPYP----GMVN------------REVLDQVERGYR 224
Query: 659 ----ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKE-ITAMEP 698
E L ++ C DP++RP+ + A L++ T+ EP
Sbjct: 225 MPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEP 269
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 125/282 (44%), Gaps = 45/282 (15%)
Query: 428 FSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNH 487
F IGS G G V+ G + ++A+ + + + E F ++ + + K++H
Sbjct: 9 FVQEIGS---GQFGLVHLGYWLNKDKVAIKTIREGAMS------EEDFIEEAEVMMKLSH 59
Query: 488 KNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQE----AEHLDWAMRLRIAMGMAY 543
V L G C E P +VFE+ +G L ++L Q AE L M L + GMAY
Sbjct: 60 PKLVQLYGVCLEQAPIC--LVFEFMEHGCLSDYLRTQRGLFAAETL-LGMCLDVCEGMAY 116
Query: 544 CLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF----WNNTTAAKTGS------AA 593
E + HR+L + + + E+ K+SDF ++ + TG+ A+
Sbjct: 117 LEE------ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWAS 170
Query: 594 MELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDP 652
E+ S +S+V+SFG +++E+ + G+I Y EN S + G + K P
Sbjct: 171 PEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY--ENRSNSEVVEDISTGFRLYK----P 224
Query: 653 TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEIT 694
L S + ++ +C P+ RP+ + +L EI
Sbjct: 225 RLAS------THVYQIMNHCWKERPEDRPAFSRLLRQLAEIA 260
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 125/282 (44%), Gaps = 45/282 (15%)
Query: 428 FSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNH 487
F IGS G G V+ G + ++A+ + + + E F ++ + + K++H
Sbjct: 11 FVQEIGS---GQFGLVHLGYWLNKDKVAIKTIREGAMS------EEDFIEEAEVMMKLSH 61
Query: 488 KNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQE----AEHLDWAMRLRIAMGMAY 543
V L G C E P +VFE+ +G L ++L Q AE L M L + GMAY
Sbjct: 62 PKLVQLYGVCLEQAPIC--LVFEFMEHGCLSDYLRTQRGLFAAETL-LGMCLDVCEGMAY 118
Query: 544 CLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF----WNNTTAAKTGS------AA 593
E + HR+L + + + E+ K+SDF ++ + TG+ A+
Sbjct: 119 LEE------ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWAS 172
Query: 594 MELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDP 652
E+ S +S+V+SFG +++E+ + G+I Y EN S + G + K P
Sbjct: 173 PEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY--ENRSNSEVVEDISTGFRLYK----P 226
Query: 653 TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEIT 694
L S + ++ +C P+ RP+ + +L EI
Sbjct: 227 RLAS------THVYQIMNHCWKERPEDRPAFSRLLRQLAEIA 262
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 116/270 (42%), Gaps = 51/270 (18%)
Query: 459 TSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSL- 517
+VK+ + S++ F+++ + L+ + H++ V G C E P +MVFEY +G L
Sbjct: 51 VAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPL--LMVFEYMRHGDLN 108
Query: 518 -FEHLHIQEAEHLD---------------WAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQ 561
F H +A+ L A+ ++A GM Y L +H HR+L
Sbjct: 109 RFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVY-LAGLH-----FVHRDLA 162
Query: 562 SSSIYLTEDYAAKISDFSFWNN---TTAAKTGSAAM--------ELLETSAVDLESNVYS 610
+ + + + KI DF + T + G M E + ES+V+S
Sbjct: 163 TRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWS 222
Query: 611 FGTILFEMIT-GRIS-YSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVV 668
FG +L+E+ T G+ Y + N + ++ + E+P E+ +
Sbjct: 223 FGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERP-------------RACPPEVYAI 269
Query: 669 IKNCVHPDPKQRPSMRGIAAKLKEITAMEP 698
++ C +P+QR S++ + A+L+ + P
Sbjct: 270 MRGCWQREPQQRHSIKDVHARLQALAQAPP 299
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 116/270 (42%), Gaps = 51/270 (18%)
Query: 459 TSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSL- 517
+VK+ + S++ F+++ + L+ + H++ V G C E P +MVFEY +G L
Sbjct: 45 VAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPL--LMVFEYMRHGDLN 102
Query: 518 -FEHLHIQEAEHLD---------------WAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQ 561
F H +A+ L A+ ++A GM Y L +H HR+L
Sbjct: 103 RFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVY-LAGLH-----FVHRDLA 156
Query: 562 SSSIYLTEDYAAKISDFSFWNN---TTAAKTGSAAM--------ELLETSAVDLESNVYS 610
+ + + + KI DF + T + G M E + ES+V+S
Sbjct: 157 TRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWS 216
Query: 611 FGTILFEMIT-GRIS-YSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVV 668
FG +L+E+ T G+ Y + N + ++ + E+P E+ +
Sbjct: 217 FGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERP-------------RACPPEVYAI 263
Query: 669 IKNCVHPDPKQRPSMRGIAAKLKEITAMEP 698
++ C +P+QR S++ + A+L+ + P
Sbjct: 264 MRGCWQREPQQRHSIKDVHARLQALAQAPP 293
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 125/285 (43%), Gaps = 51/285 (17%)
Query: 434 SFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNL 493
G G V+ GT + +A+ + + + F ++ + K+ H+ V L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP------EAFLQEAQVMKKLRHEKLVQL 78
Query: 494 IGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWA----MRLRIAMGMAYCLEHMH 549
E+ + +V EY G L + L + ++L M +IA GMAY +E M+
Sbjct: 79 YAVVSEEPIY---IVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY-VERMN 134
Query: 550 QLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW----NNTTAAKTGS------AAMELLET 599
+ HR+L++++I + E+ K++DF +N A+ G+ A E
Sbjct: 135 YV-----HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 189
Query: 600 SAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 658
++S+V+SFG +L E+ T GR+ Y + N ++++D + ++
Sbjct: 190 GRFTIKSDVWSFGILLTELTTKGRVPYP----GMVN------------REVLDQVERGYR 233
Query: 659 ----ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKE-ITAMEP 698
E L ++ C DP++RP+ + A L++ T+ EP
Sbjct: 234 MPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEP 278
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 126/284 (44%), Gaps = 51/284 (17%)
Query: 435 FSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLI 494
G G V+ GT + +A+ + + + F ++ + K+ H+ V L
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSP------EAFLQEAQVMKKLRHEKLVQLY 246
Query: 495 GYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWA----MRLRIAMGMAYCLEHMHQ 550
E EP +V EY GSL + L + ++L M +IA GMAY +E M+
Sbjct: 247 AVVSE-EPI--YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY-VERMNY 302
Query: 551 LTPPIAHRNLQSSSIYLTEDYAAKISDFSFW----NNTTAAKTGS------AAMELLETS 600
+ HR+L++++I + E+ K++DF +N A+ G+ A E
Sbjct: 303 V-----HRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYG 357
Query: 601 AVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ- 658
++S+V+SFG +L E+ T GR+ Y + N ++++D + ++
Sbjct: 358 RFTIKSDVWSFGILLTELTTKGRVPYP----GMVN------------REVLDQVERGYRM 401
Query: 659 ---ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKE-ITAMEP 698
E L ++ C DP++RP+ + A L++ T+ EP
Sbjct: 402 PCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEP 445
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 124/271 (45%), Gaps = 37/271 (13%)
Query: 450 SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 509
+G E+AV K++ + S +L+ FR+ + + +NH N V L E ++ T +V
Sbjct: 31 TGKEVAVKIID-KTQLN-SSSLQKLFRE-VRIMKVLNHPNIVKLFEVIETEK--TLYLVM 85
Query: 510 EYSPNGSLFEHL--HIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYL 567
EY+ G +F++L H E A +I + YC HQ I HR+L++ ++ L
Sbjct: 86 EYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYC----HQ--KFIVHRDLKAENLLL 139
Query: 568 TEDYAAKISDFSFWN--------NTTAAKTGSAAMELLETSAVD-LESNVYSFGTILFEM 618
D KI+DF F N +T AA EL + D E +V+S G IL+ +
Sbjct: 140 DADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTL 199
Query: 619 ITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ-ENVLEELLVVIKNCVHPDP 677
++G + + +N L+ L+G+ + P S EN+L++ L++ +P
Sbjct: 200 VSGSLPFDGQN--LKELRERVLRGKYRI-----PFYMSTDCENLLKKFLIL-------NP 245
Query: 678 KQRPSMRGIAAKLKEITAMEPDGATPKLSPL 708
+R ++ I E D P + PL
Sbjct: 246 SKRGTLEQIMKDRWMNVGHEDDELKPYVEPL 276
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 125/283 (44%), Gaps = 45/283 (15%)
Query: 428 FSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNH 487
F IGS G G V+ G + ++A+ + + + E F ++ + + K++H
Sbjct: 11 FVQEIGS---GQFGLVHLGYWLNKDKVAIKTIREGAMS------EEDFIEEAEVMMKLSH 61
Query: 488 KNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQE----AEHLDWAMRLRIAMGMAY 543
V L G C E P +VFE+ +G L ++L Q AE L M L + GMAY
Sbjct: 62 PKLVQLYGVCLEQAPIC--LVFEFMEHGCLSDYLRTQRGLFAAETL-LGMCLDVCEGMAY 118
Query: 544 CLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF----WNNTTAAKTGS------AA 593
E + HR+L + + + E+ K+SDF ++ + TG+ A+
Sbjct: 119 LEE------ASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWAS 172
Query: 594 MELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDP 652
E+ S +S+V+SFG +++E+ + G+I Y EN S + G + K P
Sbjct: 173 PEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY--ENRSNSEVVEDISTGFRLYK----P 226
Query: 653 TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITA 695
L S + ++ +C P+ RP+ + +L I A
Sbjct: 227 RLAS------THVYQIMNHCWKERPEDRPAFSRLLRQLAAIAA 263
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 122/294 (41%), Gaps = 61/294 (20%)
Query: 428 FSNIIGSFSDGTVGTVYKGTL--SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV 485
F+ +IG G G VY GTL + G +I S+ D + SQF + +
Sbjct: 26 FNEVIGR---GHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE--VSQFLTEGIIMKDF 80
Query: 486 NHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHL----HIQEAEHLDWAMRLRIAMGM 541
+H N ++L+G C E + ++V Y +G L + H + L L++A GM
Sbjct: 81 SHPNVLSLLGICLRSEG-SPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGM 138
Query: 542 AYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN-------TTAAKTGSA-- 592
Y + HR+L + + L E + K++DF + + KTG+
Sbjct: 139 KYLA------SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP 192
Query: 593 ----AMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKD 648
A+E L+T +S+V+SFG +L+E++T +G P D
Sbjct: 193 VKWMALESLQTQKFTTKSDVWSFGVLLWELMT--------------------RGAPPYPD 232
Query: 649 I--VDPTLKSFQ-------ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 693
+ D T+ Q E + L V+ C HP + RPS + +++ I
Sbjct: 233 VNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 286
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 126/285 (44%), Gaps = 51/285 (17%)
Query: 434 SFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNL 493
G G V+ GT + +A+ + + + F ++ + K+ H+ V L
Sbjct: 15 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP------EAFLQEAQVMKKLRHEKLVQL 68
Query: 494 IGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWA----MRLRIAMGMAYCLEHMH 549
E EP +V EY GSL + L + ++L M +IA GMAY +E M+
Sbjct: 69 YAVVSE-EPIX--IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAY-VERMN 124
Query: 550 QLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW----NNTTAAKTGS------AAMELLET 599
+ HR+L++++I + E+ K++DF +N A+ G+ A E
Sbjct: 125 YV-----HRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALY 179
Query: 600 SAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 658
++S+V+SFG +L E+ T GR+ Y + N ++++D + ++
Sbjct: 180 GRFTIKSDVWSFGILLTELTTKGRVPYP----GMVN------------REVLDQVERGYR 223
Query: 659 ----ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKE-ITAMEP 698
E L ++ C +P++RP+ + A L++ T+ EP
Sbjct: 224 MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEP 268
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 122/294 (41%), Gaps = 61/294 (20%)
Query: 428 FSNIIGSFSDGTVGTVYKGTL--SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV 485
F+ +IG G G VY GTL + G +I S+ D + SQF + +
Sbjct: 53 FNEVIGR---GHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE--VSQFLTEGIIMKDF 107
Query: 486 NHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHL----HIQEAEHLDWAMRLRIAMGM 541
+H N ++L+G C E + ++V Y +G L + H + L L++A GM
Sbjct: 108 SHPNVLSLLGICLRSEG-SPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGM 165
Query: 542 AYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN-------TTAAKTGSA-- 592
Y + HR+L + + L E + K++DF + + KTG+
Sbjct: 166 KYLA------SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP 219
Query: 593 ----AMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKD 648
A+E L+T +S+V+SFG +L+E++T +G P D
Sbjct: 220 VKWMALESLQTQKFTTKSDVWSFGVLLWELMT--------------------RGAPPYPD 259
Query: 649 I--VDPTLKSFQ-------ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 693
+ D T+ Q E + L V+ C HP + RPS + +++ I
Sbjct: 260 VNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 313
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 101/242 (41%), Gaps = 52/242 (21%)
Query: 486 NHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRL---------- 535
HKN +NL+G C +D P ++ EY+ G+L E+L + ++++ +
Sbjct: 145 KHKNIINLLGACTQDGPL--YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 202
Query: 536 --------RIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF--------- 578
++A GM Y HR+L + ++ +TE+ KI+DF
Sbjct: 203 KDLVSCTYQLARGMEYLASQK------CIHRDLAARNVLVTENNVMKIADFGLARDINNI 256
Query: 579 SFWNNTTAAKTGSAAM--ELLETSAVDLESNVYSFGTILFEMIT--GRISYSIENGSLEN 634
++ TT + M E L +S+V+SFG +++E+ T G I L
Sbjct: 257 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK 316
Query: 635 WASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEIT 694
E + ++P N EL +++++C H P QRP+ + + L I
Sbjct: 317 LLKEGHRMDKP-------------ANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 363
Query: 695 AM 696
+
Sbjct: 364 TL 365
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 122/294 (41%), Gaps = 61/294 (20%)
Query: 428 FSNIIGSFSDGTVGTVYKGTL--SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV 485
F+ +IG G G VY GTL + G +I S+ D + SQF + +
Sbjct: 33 FNEVIGR---GHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE--VSQFLTEGIIMKDF 87
Query: 486 NHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHL----HIQEAEHLDWAMRLRIAMGM 541
+H N ++L+G C E + ++V Y +G L + H + L L++A GM
Sbjct: 88 SHPNVLSLLGICLRSEG-SPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGM 145
Query: 542 AYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN-------TTAAKTGSA-- 592
Y + HR+L + + L E + K++DF + + KTG+
Sbjct: 146 KYLA------SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLP 199
Query: 593 ----AMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKD 648
A+E L+T +S+V+SFG +L+E++T +G P D
Sbjct: 200 VKWMALESLQTQKFTTKSDVWSFGVLLWELMT--------------------RGAPPYPD 239
Query: 649 I--VDPTLKSFQ-------ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 693
+ D T+ Q E + L V+ C HP + RPS + +++ I
Sbjct: 240 VNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 293
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 122/294 (41%), Gaps = 61/294 (20%)
Query: 428 FSNIIGSFSDGTVGTVYKGTL--SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV 485
F+ +IG G G VY GTL + G +I S+ D + SQF + +
Sbjct: 31 FNEVIGR---GHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE--VSQFLTEGIIMKDF 85
Query: 486 NHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHL----HIQEAEHLDWAMRLRIAMGM 541
+H N ++L+G C E + ++V Y +G L + H + L L++A GM
Sbjct: 86 SHPNVLSLLGICLRSEG-SPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGM 143
Query: 542 AYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN-------TTAAKTGSA-- 592
Y + HR+L + + L E + K++DF + + KTG+
Sbjct: 144 KYLA------SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP 197
Query: 593 ----AMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKD 648
A+E L+T +S+V+SFG +L+E++T +G P D
Sbjct: 198 VKWMALESLQTQKFTTKSDVWSFGVLLWELMT--------------------RGAPPYPD 237
Query: 649 I--VDPTLKSFQ-------ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 693
+ D T+ Q E + L V+ C HP + RPS + +++ I
Sbjct: 238 VNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 291
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 122/294 (41%), Gaps = 61/294 (20%)
Query: 428 FSNIIGSFSDGTVGTVYKGTL--SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV 485
F+ +IG G G VY GTL + G +I S+ D + SQF + +
Sbjct: 52 FNEVIGR---GHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE--VSQFLTEGIIMKDF 106
Query: 486 NHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHL----HIQEAEHLDWAMRLRIAMGM 541
+H N ++L+G C E + ++V Y +G L + H + L L++A GM
Sbjct: 107 SHPNVLSLLGICLRSEG-SPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGM 164
Query: 542 AYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN-------TTAAKTGSA-- 592
Y + HR+L + + L E + K++DF + + KTG+
Sbjct: 165 KYLA------SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP 218
Query: 593 ----AMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKD 648
A+E L+T +S+V+SFG +L+E++T +G P D
Sbjct: 219 VKWMALESLQTQKFTTKSDVWSFGVLLWELMT--------------------RGAPPYPD 258
Query: 649 I--VDPTLKSFQ-------ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 693
+ D T+ Q E + L V+ C HP + RPS + +++ I
Sbjct: 259 VNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 312
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 125/285 (43%), Gaps = 51/285 (17%)
Query: 434 SFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNL 493
G G V+ GT + +A+ + + + F ++ + K+ H+ V L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP------EAFLQEAQVMKKLRHEKLVQL 78
Query: 494 IGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWA----MRLRIAMGMAYCLEHMH 549
E+ + +V EY GSL + L + ++L M +IA GMAY +E M+
Sbjct: 79 YAVVSEEPIY---IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY-VERMN 134
Query: 550 QLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW----NNTTAAKTGS------AAMELLET 599
+ HR+L +++I + E+ K++DF +N A+ G+ A E
Sbjct: 135 YV-----HRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 189
Query: 600 SAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 658
++S+V+SFG +L E+ T GR+ Y + N ++++D + ++
Sbjct: 190 GRFTIKSDVWSFGILLTELTTKGRVPYP----GMVN------------REVLDQVERGYR 233
Query: 659 ----ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKE-ITAMEP 698
E L ++ C DP++RP+ + A L++ T+ EP
Sbjct: 234 MPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEP 278
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 122/294 (41%), Gaps = 61/294 (20%)
Query: 428 FSNIIGSFSDGTVGTVYKGTL--SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV 485
F+ +IG G G VY GTL + G +I S+ D + SQF + +
Sbjct: 32 FNEVIGR---GHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE--VSQFLTEGIIMKDF 86
Query: 486 NHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHL----HIQEAEHLDWAMRLRIAMGM 541
+H N ++L+G C E + ++V Y +G L + H + L L++A GM
Sbjct: 87 SHPNVLSLLGICLRSEG-SPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGM 144
Query: 542 AYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN-------TTAAKTGSA-- 592
Y + HR+L + + L E + K++DF + + KTG+
Sbjct: 145 KYLA------SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP 198
Query: 593 ----AMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKD 648
A+E L+T +S+V+SFG +L+E++T +G P D
Sbjct: 199 VKWMALESLQTQKFTTKSDVWSFGVLLWELMT--------------------RGAPPYPD 238
Query: 649 I--VDPTLKSFQ-------ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 693
+ D T+ Q E + L V+ C HP + RPS + +++ I
Sbjct: 239 VNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 292
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 122/294 (41%), Gaps = 61/294 (20%)
Query: 428 FSNIIGSFSDGTVGTVYKGTL--SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV 485
F+ +IG G G VY GTL + G +I S+ D + SQF + +
Sbjct: 29 FNEVIGR---GHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE--VSQFLTEGIIMKDF 83
Query: 486 NHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHL----HIQEAEHLDWAMRLRIAMGM 541
+H N ++L+G C E + ++V Y +G L + H + L L++A GM
Sbjct: 84 SHPNVLSLLGICLRSEG-SPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGM 141
Query: 542 AYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN-------TTAAKTGSA-- 592
Y + HR+L + + L E + K++DF + + KTG+
Sbjct: 142 KYLA------SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP 195
Query: 593 ----AMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKD 648
A+E L+T +S+V+SFG +L+E++T +G P D
Sbjct: 196 VKWMALESLQTQKFTTKSDVWSFGVLLWELMT--------------------RGAPPYPD 235
Query: 649 I--VDPTLKSFQ-------ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 693
+ D T+ Q E + L V+ C HP + RPS + +++ I
Sbjct: 236 VNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 289
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 122/294 (41%), Gaps = 61/294 (20%)
Query: 428 FSNIIGSFSDGTVGTVYKGTL--SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV 485
F+ +IG G G VY GTL + G +I S+ D + SQF + +
Sbjct: 33 FNEVIGR---GHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE--VSQFLTEGIIMKDF 87
Query: 486 NHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHL----HIQEAEHLDWAMRLRIAMGM 541
+H N ++L+G C E + ++V Y +G L + H + L L++A GM
Sbjct: 88 SHPNVLSLLGICLRSEG-SPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGM 145
Query: 542 AYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN-------TTAAKTGSA-- 592
Y + HR+L + + L E + K++DF + + KTG+
Sbjct: 146 KYLA------SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP 199
Query: 593 ----AMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKD 648
A+E L+T +S+V+SFG +L+E++T +G P D
Sbjct: 200 VKWMALESLQTQKFTTKSDVWSFGVLLWELMT--------------------RGAPPYPD 239
Query: 649 I--VDPTLKSFQ-------ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 693
+ D T+ Q E + L V+ C HP + RPS + +++ I
Sbjct: 240 VNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 293
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 122/294 (41%), Gaps = 61/294 (20%)
Query: 428 FSNIIGSFSDGTVGTVYKGTL--SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV 485
F+ +IG G G VY GTL + G +I S+ D + SQF + +
Sbjct: 34 FNEVIGR---GHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE--VSQFLTEGIIMKDF 88
Query: 486 NHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHL----HIQEAEHLDWAMRLRIAMGM 541
+H N ++L+G C E + ++V Y +G L + H + L L++A GM
Sbjct: 89 SHPNVLSLLGICLRSEG-SPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGM 146
Query: 542 AYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN-------TTAAKTGSA-- 592
Y + HR+L + + L E + K++DF + + KTG+
Sbjct: 147 KYLA------SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP 200
Query: 593 ----AMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKD 648
A+E L+T +S+V+SFG +L+E++T +G P D
Sbjct: 201 VKWMALESLQTQKFTTKSDVWSFGVLLWELMT--------------------RGAPPYPD 240
Query: 649 I--VDPTLKSFQ-------ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 693
+ D T+ Q E + L V+ C HP + RPS + +++ I
Sbjct: 241 VNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 117/252 (46%), Gaps = 45/252 (17%)
Query: 453 EIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYS 512
EI ++ S K R + R+++ L+ + H N V EE+ +V +Y
Sbjct: 56 EINISRMSSKEREES--------RREVAVLANMKHPNIVQYRESFEENGSL--YIVMDYC 105
Query: 513 PNGSLFEHLH------IQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIY 566
G LF+ ++ QE + LDW +++ +A L+H+H I HR+++S +I+
Sbjct: 106 EGGDLFKRINAQKGVLFQEDQILDWFVQICLA------LKHVHDRK--ILHRDIKSQNIF 157
Query: 567 LTEDYAAKISDFSFWN--NTTA----AKTGSA---AMELLETSAVDLESNVYSFGTILFE 617
LT+D ++ DF N+T A G+ + E+ E + +S++++ G +L+E
Sbjct: 158 LTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYE 217
Query: 618 MITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDP 677
+ T + ++ E GS++N + + G P P + + L ++ +P
Sbjct: 218 LCT--LKHAFEAGSMKNLVLKIISGSFP------PVSLHYSYD----LRSLVSQLFKRNP 265
Query: 678 KQRPSMRGIAAK 689
+ RPS+ I K
Sbjct: 266 RDRPSVNSILEK 277
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 122/294 (41%), Gaps = 61/294 (20%)
Query: 428 FSNIIGSFSDGTVGTVYKGTL--SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV 485
F+ +IG G G VY GTL + G +I S+ D + SQF + +
Sbjct: 34 FNEVIGR---GHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE--VSQFLTEGIIMKDF 88
Query: 486 NHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHL----HIQEAEHLDWAMRLRIAMGM 541
+H N ++L+G C E + ++V Y +G L + H + L L++A GM
Sbjct: 89 SHPNVLSLLGICLRSEG-SPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGM 146
Query: 542 AYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN-------TTAAKTGSA-- 592
Y + HR+L + + L E + K++DF + + KTG+
Sbjct: 147 KYLA------SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP 200
Query: 593 ----AMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKD 648
A+E L+T +S+V+SFG +L+E++T +G P D
Sbjct: 201 VKWMALESLQTQKFTTKSDVWSFGVLLWELMT--------------------RGAPPYPD 240
Query: 649 I--VDPTLKSFQ-------ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 693
+ D T+ Q E + L V+ C HP + RPS + +++ I
Sbjct: 241 VNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 101/241 (41%), Gaps = 52/241 (21%)
Query: 487 HKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRL----------- 535
HKN +NL+G C +D P ++ EY+ G+L E+L + ++++ +
Sbjct: 87 HKNIINLLGACTQDGPL--YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 144
Query: 536 -------RIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF---------S 579
++A GM Y HR+L + ++ +TE+ KI+DF
Sbjct: 145 DLVSCTYQLARGMEYLASQ------KCIHRDLTARNVLVTENNVMKIADFGLARDINNID 198
Query: 580 FWNNTTAAKTGSAAM--ELLETSAVDLESNVYSFGTILFEMIT--GRISYSIENGSLENW 635
++ TT + M E L +S+V+SFG +++E+ T G I L
Sbjct: 199 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 258
Query: 636 ASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITA 695
E + ++P N EL +++++C H P QRP+ + + L I
Sbjct: 259 LKEGHRMDKP-------------ANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 305
Query: 696 M 696
+
Sbjct: 306 L 306
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 101/241 (41%), Gaps = 52/241 (21%)
Query: 487 HKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRL----------- 535
HKN +NL+G C +D P ++ EY+ G+L E+L + ++++ +
Sbjct: 89 HKNIINLLGACTQDGPL--YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 146
Query: 536 -------RIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF---------S 579
++A GM Y HR+L + ++ +TE+ KI+DF
Sbjct: 147 DLVSCTYQLARGMEYLASQ------KCIHRDLAARNVLVTENNVMKIADFGLARDINNID 200
Query: 580 FWNNTTAAKTGSAAM--ELLETSAVDLESNVYSFGTILFEMIT--GRISYSIENGSLENW 635
++ TT + M E L +S+V+SFG +++E+ T G I L
Sbjct: 201 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 260
Query: 636 ASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITA 695
E + ++P N EL +++++C H P QRP+ + + L I
Sbjct: 261 LKEGHRMDKP-------------ANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 307
Query: 696 M 696
+
Sbjct: 308 L 308
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 101/241 (41%), Gaps = 52/241 (21%)
Query: 487 HKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRL----------- 535
HKN +NL+G C +D P ++ EY+ G+L E+L + ++++ +
Sbjct: 92 HKNIINLLGACTQDGPL--YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 149
Query: 536 -------RIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF---------S 579
++A GM Y HR+L + ++ +TE+ KI+DF
Sbjct: 150 DLVSCTYQLARGMEYLASQ------KCIHRDLAARNVLVTENNVMKIADFGLARDINNID 203
Query: 580 FWNNTTAAKTGSAAM--ELLETSAVDLESNVYSFGTILFEMIT--GRISYSIENGSLENW 635
++ TT + M E L +S+V+SFG +++E+ T G I L
Sbjct: 204 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 263
Query: 636 ASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITA 695
E + ++P N EL +++++C H P QRP+ + + L I
Sbjct: 264 LKEGHRMDKP-------------ANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 310
Query: 696 M 696
+
Sbjct: 311 L 311
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 126/285 (44%), Gaps = 51/285 (17%)
Query: 434 SFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNL 493
G G V+ GT + +A+ + + + F ++ + K+ H+ V L
Sbjct: 18 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP------EAFLQEAQVMKKLRHEKLVQL 71
Query: 494 IGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWA----MRLRIAMGMAYCLEHMH 549
E+ + +V EY GSL + L + ++L M +IA GMAY +E M+
Sbjct: 72 YAVVSEEPIY---IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAY-VERMN 127
Query: 550 QLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW----NNTTAAKTGS------AAMELLET 599
+ HR+L++++I + E+ K++DF +N A+ G+ A E
Sbjct: 128 YV-----HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 182
Query: 600 SAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 658
++S+V+SFG +L E+ T GR+ Y + N ++++D + ++
Sbjct: 183 GRFTIKSDVWSFGILLTELTTKGRVPYP----GMVN------------REVLDQVERGYR 226
Query: 659 ----ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKE-ITAMEP 698
E L ++ C +P++RP+ + A L++ T+ EP
Sbjct: 227 MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEP 271
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 125/285 (43%), Gaps = 51/285 (17%)
Query: 434 SFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNL 493
G G V+ GT + +A+ + + + F ++ + K+ H+ V L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP------EAFLQEAQVMKKLRHEKLVQL 78
Query: 494 IGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWA----MRLRIAMGMAYCLEHMH 549
E+ + +V EY G L + L + ++L M +IA GMAY +E M+
Sbjct: 79 YAVVSEEPIY---IVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY-VERMN 134
Query: 550 QLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW----NNTTAAKTGS------AAMELLET 599
+ HR+L++++I + E+ K++DF +N A+ G+ A E
Sbjct: 135 YV-----HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 189
Query: 600 SAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 658
++S+V+SFG +L E+ T GR+ Y + N ++++D + ++
Sbjct: 190 GRFTIKSDVWSFGILLTELTTKGRVPYP----GMVN------------REVLDQVERGYR 233
Query: 659 ----ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKE-ITAMEP 698
E L ++ C DP++RP+ + A L++ T+ EP
Sbjct: 234 MPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEP 278
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 101/241 (41%), Gaps = 52/241 (21%)
Query: 487 HKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRL----------- 535
HKN +NL+G C +D P ++ EY+ G+L E+L + ++++ +
Sbjct: 100 HKNIINLLGACTQDGPL--YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 536 -------RIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF---------S 579
++A GM Y HR+L + ++ +TE+ KI+DF
Sbjct: 158 DLVSCTYQLARGMEYLASQ------KCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 580 FWNNTTAAKTGSAAM--ELLETSAVDLESNVYSFGTILFEMIT--GRISYSIENGSLENW 635
++ TT + M E L +S+V+SFG +++E+ T G I L
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 271
Query: 636 ASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITA 695
E + ++P N EL +++++C H P QRP+ + + L I
Sbjct: 272 LKEGHRMDKP-------------ANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318
Query: 696 M 696
+
Sbjct: 319 L 319
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 126/284 (44%), Gaps = 51/284 (17%)
Query: 435 FSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLI 494
G G V+ GT + +A+ + + + F ++ + K+ H+ V L
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP------EAFLQEAQVMKKLRHEKLVQLY 328
Query: 495 GYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWA----MRLRIAMGMAYCLEHMHQ 550
E EP +V EY GSL + L + ++L M +IA GMAY +E M+
Sbjct: 329 AVVSE-EPI--YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAY-VERMNY 384
Query: 551 LTPPIAHRNLQSSSIYLTEDYAAKISDFSFW----NNTTAAKTGS------AAMELLETS 600
+ HR+L++++I + E+ K++DF +N A+ G+ A E
Sbjct: 385 V-----HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG 439
Query: 601 AVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ- 658
++S+V+SFG +L E+ T GR+ Y + N ++++D + ++
Sbjct: 440 RFTIKSDVWSFGILLTELTTKGRVPYP----GMVN------------REVLDQVERGYRM 483
Query: 659 ---ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKE-ITAMEP 698
E L ++ C +P++RP+ + A L++ T+ EP
Sbjct: 484 PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEP 527
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 126/285 (44%), Gaps = 51/285 (17%)
Query: 434 SFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNL 493
G G V+ GT + +A+ + + + F ++ + K+ H+ V L
Sbjct: 22 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP------EAFLQEAQVMKKLRHEKLVQL 75
Query: 494 IGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWA----MRLRIAMGMAYCLEHMH 549
E+ + +V EY GSL + L + ++L M +IA GMAY +E M+
Sbjct: 76 YAVVSEEPIY---IVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAY-VERMN 131
Query: 550 QLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW----NNTTAAKTGS------AAMELLET 599
+ HR+L++++I + E+ K++DF +N A+ G+ A E
Sbjct: 132 YV-----HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 186
Query: 600 SAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 658
++S+V+SFG +L E+ T GR+ Y + N ++++D + ++
Sbjct: 187 GRFTIKSDVWSFGILLTELTTKGRVPYP----GMVN------------REVLDQVERGYR 230
Query: 659 ----ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKE-ITAMEP 698
E L ++ C +P++RP+ + A L++ T+ EP
Sbjct: 231 MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEP 275
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 96/197 (48%), Gaps = 19/197 (9%)
Query: 438 GTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYC 497
G G VY G + +VK+ + + +E +F K+ + ++ H N V L+G C
Sbjct: 43 GQYGEVYVGVWKK----YSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVC 97
Query: 498 EEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAH 557
+ PF +V EY P G+L ++L E + + L +A ++ +E++ + H
Sbjct: 98 TLEPPF--YIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKKN--FIH 153
Query: 558 RNLQSSSIYLTEDYAAKISDFSF----WNNTTAAKTGS------AAMELLETSAVDLESN 607
R+L + + + E++ K++DF +T A G+ A E L + ++S+
Sbjct: 154 RDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSD 213
Query: 608 VYSFGTILFEMITGRIS 624
V++FG +L+E+ T +S
Sbjct: 214 VWAFGVLLWEIATYGMS 230
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 126/285 (44%), Gaps = 51/285 (17%)
Query: 434 SFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNL 493
G G V+ GT + +A+ + + + F ++ + K+ H+ V L
Sbjct: 22 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP------EAFLQEAQVMKKLRHEKLVQL 75
Query: 494 IGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWA----MRLRIAMGMAYCLEHMH 549
E+ + +V EY GSL + L + ++L M +IA GMAY +E M+
Sbjct: 76 YAVVSEEPIY---IVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAY-VERMN 131
Query: 550 QLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW----NNTTAAKTGS------AAMELLET 599
+ HR+L++++I + E+ K++DF +N A+ G+ A E
Sbjct: 132 YV-----HRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALY 186
Query: 600 SAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 658
++S+V+SFG +L E+ T GR+ Y + N ++++D + ++
Sbjct: 187 GRFTIKSDVWSFGILLTELTTKGRVPYP----GMVN------------REVLDQVERGYR 230
Query: 659 ----ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKE-ITAMEP 698
E L ++ C +P++RP+ + A L++ T+ EP
Sbjct: 231 MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEP 275
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 126/284 (44%), Gaps = 51/284 (17%)
Query: 435 FSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLI 494
G G V+ GT + +A+ + + + F ++ + K+ H+ V L
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP------EAFLQEAQVMKKLRHEKLVQLY 245
Query: 495 GYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWA----MRLRIAMGMAYCLEHMHQ 550
E EP +V EY GSL + L + ++L M +IA GMAY +E M+
Sbjct: 246 AVVSE-EPI--YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAY-VERMNY 301
Query: 551 LTPPIAHRNLQSSSIYLTEDYAAKISDFSFW----NNTTAAKTGS------AAMELLETS 600
+ HR+L++++I + E+ K++DF +N A+ G+ A E
Sbjct: 302 V-----HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG 356
Query: 601 AVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ- 658
++S+V+SFG +L E+ T GR+ Y + N ++++D + ++
Sbjct: 357 RFTIKSDVWSFGILLTELTTKGRVPYP----GMVN------------REVLDQVERGYRM 400
Query: 659 ---ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKE-ITAMEP 698
E L ++ C +P++RP+ + A L++ T+ EP
Sbjct: 401 PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEP 444
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 100/241 (41%), Gaps = 52/241 (21%)
Query: 487 HKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRL----------- 535
HKN +NL+G C +D P ++ EY+ G+L E+L + ++++ +
Sbjct: 100 HKNIINLLGACTQDGPL--YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 536 -------RIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF---WNNTT 585
++A GM Y HR+L + ++ +TE+ KI+DF NN
Sbjct: 158 DLVSCTYQLARGMEYLASQ------KCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 586 AAKTGS--------AAMELLETSAVDLESNVYSFGTILFEMIT--GRISYSIENGSLENW 635
K + A E L +S+V+SFG +++E+ T G I L
Sbjct: 212 XXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 271
Query: 636 ASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITA 695
E + ++P N EL +++++C H P QRP+ + + L I
Sbjct: 272 LKEGHRMDKP-------------ANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318
Query: 696 M 696
+
Sbjct: 319 L 319
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 126/284 (44%), Gaps = 51/284 (17%)
Query: 435 FSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLI 494
G G V+ GT + +A+ + + + F ++ + K+ H+ V L
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP------EAFLQEAQVMKKLRHEKLVQLY 245
Query: 495 GYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWA----MRLRIAMGMAYCLEHMHQ 550
E EP +V EY GSL + L + ++L M +IA GMAY +E M+
Sbjct: 246 AVVSE-EPI--YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAY-VERMNY 301
Query: 551 LTPPIAHRNLQSSSIYLTEDYAAKISDFSFW----NNTTAAKTGS------AAMELLETS 600
+ HR+L++++I + E+ K++DF +N A+ G+ A E
Sbjct: 302 V-----HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG 356
Query: 601 AVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ- 658
++S+V+SFG +L E+ T GR+ Y + N ++++D + ++
Sbjct: 357 RFTIKSDVWSFGILLTELTTKGRVPYP----GMVN------------REVLDQVERGYRM 400
Query: 659 ---ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKE-ITAMEP 698
E L ++ C +P++RP+ + A L++ T+ EP
Sbjct: 401 PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEP 444
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 123/277 (44%), Gaps = 42/277 (15%)
Query: 431 IIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNF 490
++ G G V+ G + ++AV S S + F + + + ++ H+
Sbjct: 13 LVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP------DAFLAEANLMKQLQHQRL 66
Query: 491 VNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLD----WAMRLRIAMGMAYCLE 546
V L ++ + ++ EY NGSL + L L M +IA GMA+ E
Sbjct: 67 VRLYAVVTQEPIY---IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 123
Query: 547 HMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW----NNTTAAKTGS------AAMEL 596
+ HRNL++++I +++ + KI+DF +N A+ G+ A E
Sbjct: 124 RNY------IHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEA 177
Query: 597 LETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLK 655
+ ++S+V+SFG +L E++T GRI Y + N E ++ + +V P
Sbjct: 178 INYGTFTIKSDVWSFGILLTEIVTHGRIPYP----GMTN--PEVIQNLERGYRMVRP--- 228
Query: 656 SFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKE 692
+N EEL +++ C P+ RP+ + + L++
Sbjct: 229 ---DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLED 262
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 126/284 (44%), Gaps = 51/284 (17%)
Query: 435 FSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLI 494
G G V+ GT + +A+ + + + F ++ + K+ H+ V L
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP------EAFLQEAQVMKKLRHEKLVQLY 245
Query: 495 GYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWA----MRLRIAMGMAYCLEHMHQ 550
E EP +V EY GSL + L + ++L M +IA GMAY +E M+
Sbjct: 246 AVVSE-EPI--YIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAY-VERMNY 301
Query: 551 LTPPIAHRNLQSSSIYLTEDYAAKISDFSFW----NNTTAAKTGS------AAMELLETS 600
+ HR+L++++I + E+ K++DF +N A+ G+ A E
Sbjct: 302 V-----HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG 356
Query: 601 AVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ- 658
++S+V+SFG +L E+ T GR+ Y + N ++++D + ++
Sbjct: 357 RFTIKSDVWSFGILLTELTTKGRVPYP----GMVN------------REVLDQVERGYRM 400
Query: 659 ---ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKE-ITAMEP 698
E L ++ C +P++RP+ + A L++ T+ EP
Sbjct: 401 PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEP 444
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 122/294 (41%), Gaps = 61/294 (20%)
Query: 428 FSNIIGSFSDGTVGTVYKGTL--SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV 485
F+ +IG G G VY GTL + G +I S+ D + SQF + +
Sbjct: 39 FNEVIGR---GHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE--VSQFLTEGIIMKDF 93
Query: 486 NHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHL----HIQEAEHLDWAMRLRIAMGM 541
+H N ++L+G C E + ++V Y +G L + H + L L++A GM
Sbjct: 94 SHPNVLSLLGICLRSEG-SPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGM 151
Query: 542 AYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN-------TTAAKTGSA-- 592
+ + HR+L + + L E + K++DF + + KTG+
Sbjct: 152 KFLA------SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLP 205
Query: 593 ----AMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKD 648
A+E L+T +S+V+SFG +L+E++T +G P D
Sbjct: 206 VKWMALESLQTQKFTTKSDVWSFGVLLWELMT--------------------RGAPPYPD 245
Query: 649 I--VDPTLKSFQ-------ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 693
+ D T+ Q E + L V+ C HP + RPS + +++ I
Sbjct: 246 VNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 299
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 131/293 (44%), Gaps = 38/293 (12%)
Query: 407 KAFVTGV-PKLKRSELEAACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRA 465
K V GV P + E+E + +G G G VY+G + +VK+
Sbjct: 241 KPTVYGVSPNYDKWEMERTDITMKHKLGG---GQYGEVYEGVWKK----YSLTVAVKTLK 293
Query: 466 DWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQE 525
+ + +E +F K+ + ++ H N V L+G C + PF ++ E+ G+L ++L
Sbjct: 294 EDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPF--YIITEFMTYGNLLDYLRECN 350
Query: 526 AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF----W 581
+ ++ + L +A ++ +E++ + HRNL + + + E++ K++DF
Sbjct: 351 RQEVNAVVLLYMATQISSAMEYLEKKN--FIHRNLAARNCLVGENHLVKVADFGLSRLMT 408
Query: 582 NNTTAAKTGS------AAMELLETSAVDLESNVYSFGTILFEMIT-GRISY-SIENGSLE 633
+T A G+ A E L + ++S+V++FG +L+E+ T G Y I+ +
Sbjct: 409 GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY 468
Query: 634 NWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGI 686
+ + E+P E E++ +++ C +P RPS I
Sbjct: 469 ELLEKDYRMERP-------------EGCPEKVYELMRACWQWNPSDRPSFAEI 508
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 122/294 (41%), Gaps = 61/294 (20%)
Query: 428 FSNIIGSFSDGTVGTVYKGTL--SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV 485
F+ +IG G G VY GTL + G +I S+ D + SQF + +
Sbjct: 35 FNEVIGR---GHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE--VSQFLTEGIIMKDF 89
Query: 486 NHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHL----HIQEAEHLDWAMRLRIAMGM 541
+H N ++L+G C E + ++V Y +G L + H + L L++A GM
Sbjct: 90 SHPNVLSLLGICLRSEG-SPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGM 147
Query: 542 AYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN-------TTAAKTGSA-- 592
+ + HR+L + + L E + K++DF + + KTG+
Sbjct: 148 KFLA------SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLP 201
Query: 593 ----AMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKD 648
A+E L+T +S+V+SFG +L+E++T +G P D
Sbjct: 202 VKWMALESLQTQKFTTKSDVWSFGVLLWELMT--------------------RGAPPYPD 241
Query: 649 I--VDPTLKSFQ-------ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 693
+ D T+ Q E + L V+ C HP + RPS + +++ I
Sbjct: 242 VNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 295
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 122/294 (41%), Gaps = 61/294 (20%)
Query: 428 FSNIIGSFSDGTVGTVYKGTL--SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV 485
F+ +IG G G VY GTL + G +I S+ D + SQF + +
Sbjct: 35 FNEVIGR---GHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE--VSQFLTEGIIMKDF 89
Query: 486 NHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHL----HIQEAEHLDWAMRLRIAMGM 541
+H N ++L+G C E + ++V Y +G L + H + L L++A GM
Sbjct: 90 SHPNVLSLLGICLRSEG-SPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGM 147
Query: 542 AYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN-------TTAAKTGSA-- 592
+ + HR+L + + L E + K++DF + + KTG+
Sbjct: 148 KFLA------SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLP 201
Query: 593 ----AMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKD 648
A+E L+T +S+V+SFG +L+E++T +G P D
Sbjct: 202 VKWMALESLQTQKFTTKSDVWSFGVLLWELMT--------------------RGAPPYPD 241
Query: 649 I--VDPTLKSFQ-------ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 693
+ D T+ Q E + L V+ C HP + RPS + +++ I
Sbjct: 242 VNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 295
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 122/294 (41%), Gaps = 61/294 (20%)
Query: 428 FSNIIGSFSDGTVGTVYKGTL--SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV 485
F+ +IG G G VY GTL + G +I S+ D + SQF + +
Sbjct: 34 FNEVIGR---GHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE--VSQFLTEGIIMKDF 88
Query: 486 NHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHL----HIQEAEHLDWAMRLRIAMGM 541
+H N ++L+G C E + ++V Y +G L + H + L L++A GM
Sbjct: 89 SHPNVLSLLGICLRSEG-SPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGM 146
Query: 542 AYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN-------TTAAKTGSA-- 592
+ + HR+L + + L E + K++DF + + KTG+
Sbjct: 147 KFLA------SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLP 200
Query: 593 ----AMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKD 648
A+E L+T +S+V+SFG +L+E++T +G P D
Sbjct: 201 VKWMALESLQTQKFTTKSDVWSFGVLLWELMT--------------------RGAPPYPD 240
Query: 649 I--VDPTLKSFQ-------ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 693
+ D T+ Q E + L V+ C HP + RPS + +++ I
Sbjct: 241 VNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 101/241 (41%), Gaps = 52/241 (21%)
Query: 487 HKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRL----------- 535
HKN +NL+G C +D P ++ EY+ G+L E+L + ++++ +
Sbjct: 100 HKNIINLLGACTQDGPL--YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 536 -------RIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF---------S 579
++A GM Y HR+L + ++ +TE+ +I+DF
Sbjct: 158 DLVSCTYQLARGMEYLASQ------KCIHRDLAARNVLVTENNVMRIADFGLARDINNID 211
Query: 580 FWNNTTAAKTGSAAM--ELLETSAVDLESNVYSFGTILFEMIT--GRISYSIENGSLENW 635
++ TT + M E L +S+V+SFG +++E+ T G I L
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 271
Query: 636 ASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITA 695
E + ++P N EL +++++C H P QRP+ + + L I
Sbjct: 272 LKEGHRMDKP-------------ANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318
Query: 696 M 696
+
Sbjct: 319 L 319
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 122/294 (41%), Gaps = 61/294 (20%)
Query: 428 FSNIIGSFSDGTVGTVYKGTL--SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV 485
F+ +IG G G VY GTL + G +I S+ D + SQF + +
Sbjct: 34 FNEVIGR---GHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE--VSQFLTEGIIMKDF 88
Query: 486 NHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHL----HIQEAEHLDWAMRLRIAMGM 541
+H N ++L+G C E + ++V Y +G L + H + L L++A GM
Sbjct: 89 SHPNVLSLLGICLRSEG-SPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGM 146
Query: 542 AYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN-------TTAAKTGSA-- 592
+ + HR+L + + L E + K++DF + + KTG+
Sbjct: 147 KFLA------SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLP 200
Query: 593 ----AMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKD 648
A+E L+T +S+V+SFG +L+E++T +G P D
Sbjct: 201 VKWMALESLQTQKFTTKSDVWSFGVLLWELMT--------------------RGAPPYPD 240
Query: 649 I--VDPTLKSFQ-------ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 693
+ D T+ Q E + L V+ C HP + RPS + +++ I
Sbjct: 241 VNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 126/284 (44%), Gaps = 43/284 (15%)
Query: 430 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKN 489
++ G G V+ G + ++AV S S + F + + + ++ H+
Sbjct: 25 KLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP------DAFLAEANLMKQLQHQR 78
Query: 490 FVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLD----WAMRLRIAMGMAYCL 545
V L + EP ++ EY NGSL + L L M +IA GMA+
Sbjct: 79 LVRLYAVVTQ-EPI--YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 135
Query: 546 EHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW----NNTTAAKTGS------AAME 595
E + HR+L++++I +++ + KI+DF +N A+ G+ A E
Sbjct: 136 ERNY------IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE 189
Query: 596 LLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTL 654
+ ++S+V+SFG +L E++T GRI Y + N E ++ + +V P
Sbjct: 190 AINYGTFTIKSDVWSFGILLTEIVTHGRIPYP----GMTN--PEVIQNLERGYRMVRP-- 241
Query: 655 KSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKE-ITAME 697
+N EEL +++ C P+ RP+ + + L++ TA E
Sbjct: 242 ----DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATE 281
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 131/293 (44%), Gaps = 38/293 (12%)
Query: 407 KAFVTGV-PKLKRSELEAACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRA 465
K V GV P + E+E + +G G G VY+G + +VK+
Sbjct: 199 KPTVYGVSPNYDKWEMERTDITMKHKLGG---GQYGEVYEGVWKK----YSLTVAVKTLK 251
Query: 466 DWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQE 525
+ + +E +F K+ + ++ H N V L+G C + PF ++ E+ G+L ++L
Sbjct: 252 EDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPF--YIITEFMTYGNLLDYLRECN 308
Query: 526 AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF----W 581
+ ++ + L +A ++ +E++ + HRNL + + + E++ K++DF
Sbjct: 309 RQEVNAVVLLYMATQISSAMEYLEKKN--FIHRNLAARNCLVGENHLVKVADFGLSRLMT 366
Query: 582 NNTTAAKTGS------AAMELLETSAVDLESNVYSFGTILFEMIT-GRISY-SIENGSLE 633
+T A G+ A E L + ++S+V++FG +L+E+ T G Y I+ +
Sbjct: 367 GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY 426
Query: 634 NWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGI 686
+ + E+P E E++ +++ C +P RPS I
Sbjct: 427 ELLEKDYRMERP-------------EGCPEKVYELMRACWQWNPSDRPSFAEI 466
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 125/283 (44%), Gaps = 50/283 (17%)
Query: 438 GTVGTVYKGT-LSSGVEIAVTSTSV------KSRADWSKNLESQFRKKIDTLSKVNHKNF 490
G VY+ L GV +A+ + K+RAD K +ID L ++NH N
Sbjct: 43 GQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIK--------EIDLLKQLNHPNV 94
Query: 491 VNLIGYCEEDEPFTRMMVFEYSPNGSL---FEHLHIQE---AEHLDWAMRLRIAMGMAYC 544
+ ED +V E + G L +H Q+ E W +++
Sbjct: 95 IKYYASFIEDNELN--IVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSA---- 148
Query: 545 LEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFS----FWNNTTAAKT--GSA---AME 595
LEHMH + HR+++ +++++T K+ D F + TTAA + G+ + E
Sbjct: 149 LEHMHSRR--VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPE 206
Query: 596 LLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLK 655
+ + + +S+++S G +L+EM + + G N S K EQ P L
Sbjct: 207 RIHENGYNFKSDIWSLGCLLYEMAALQSPFY---GDKMNLYSLCKKIEQ----CDYPPLP 259
Query: 656 SFQENVLEELLVVIKNCVHPDPKQRPS---MRGIAAKLKEITA 695
S ++ EEL ++ C++PDP++RP + +A ++ TA
Sbjct: 260 S--DHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTA 300
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 122/294 (41%), Gaps = 61/294 (20%)
Query: 428 FSNIIGSFSDGTVGTVYKGTL--SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV 485
F+ +IG G G VY GTL + G +I S+ D + SQF + +
Sbjct: 93 FNEVIGR---GHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE--VSQFLTEGIIMKDF 147
Query: 486 NHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHL----HIQEAEHLDWAMRLRIAMGM 541
+H N ++L+G C E + ++V Y +G L + H + L L++A GM
Sbjct: 148 SHPNVLSLLGICLRSEG-SPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGM 205
Query: 542 AYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN-------TTAAKTGSA-- 592
+ + HR+L + + L E + K++DF + + KTG+
Sbjct: 206 KFLA------SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLP 259
Query: 593 ----AMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKD 648
A+E L+T +S+V+SFG +L+E++T +G P D
Sbjct: 260 VKWMALESLQTQKFTTKSDVWSFGVLLWELMT--------------------RGAPPYPD 299
Query: 649 I--VDPTLKSFQ-------ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 693
+ D T+ Q E + L V+ C HP + RPS + +++ I
Sbjct: 300 VNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 353
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 122/294 (41%), Gaps = 61/294 (20%)
Query: 428 FSNIIGSFSDGTVGTVYKGTL--SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV 485
F+ +IG G G VY GTL + G +I S+ D + SQF + +
Sbjct: 32 FNEVIGR---GHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE--VSQFLTEGIIMKDF 86
Query: 486 NHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHL----HIQEAEHLDWAMRLRIAMGM 541
+H N ++L+G C E + ++V Y +G L + H + L L++A GM
Sbjct: 87 SHPNVLSLLGICLRSEG-SPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGM 144
Query: 542 AYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN-------TTAAKTGSA-- 592
+ + HR+L + + L E + K++DF + + KTG+
Sbjct: 145 KFLA------SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLP 198
Query: 593 ----AMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKD 648
A+E L+T +S+V+SFG +L+E++T +G P D
Sbjct: 199 VKWMALESLQTQKFTTKSDVWSFGVLLWELMT--------------------RGAPPYPD 238
Query: 649 I--VDPTLKSFQ-------ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 693
+ D T+ Q E + L V+ C HP + RPS + +++ I
Sbjct: 239 VNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 292
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 126/284 (44%), Gaps = 43/284 (15%)
Query: 430 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKN 489
++ G G V+ G + ++AV S S + F + + + ++ H+
Sbjct: 24 KLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP------DAFLAEANLMKQLQHQR 77
Query: 490 FVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLD----WAMRLRIAMGMAYCL 545
V L + EP ++ EY NGSL + L L M +IA GMA+
Sbjct: 78 LVRLYAVVTQ-EPI--YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 134
Query: 546 EHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW----NNTTAAKTGS------AAME 595
E + HR+L++++I +++ + KI+DF +N A+ G+ A E
Sbjct: 135 ERNY------IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE 188
Query: 596 LLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTL 654
+ ++S+V+SFG +L E++T GRI Y + N E ++ + +V P
Sbjct: 189 AINYGTFTIKSDVWSFGILLTEIVTHGRIPYP----GMTN--PEVIQNLERGYRMVRP-- 240
Query: 655 KSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKE-ITAME 697
+N EEL +++ C P+ RP+ + + L++ TA E
Sbjct: 241 ----DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATE 280
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 127/267 (47%), Gaps = 41/267 (15%)
Query: 423 AACEDFSNIIGSFSDGTVGTVYKGTLS---------SGVEIAVTSTSVKSRADWSKNLES 473
A+C D IG++ + T+ KG + +G E+A+ K++ + + +L+
Sbjct: 5 ASCADEQPHIGNYR--LLKTIGKGNFAKVKLARHILTGREVAIKIID-KTQLNPT-SLQK 60
Query: 474 QFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHL--HIQEAEHLDW 531
FR+ + + +NH N V L E ++ T ++ EY+ G +F++L H + E
Sbjct: 61 LFRE-VRIMKILNHPNIVKLFEVIETEK--TLYLIMEYASGGEVFDYLVAHGRMKEKEAR 117
Query: 532 AMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA----- 586
+ +I + YC HQ I HR+L++ ++ L D KI+DF F N T
Sbjct: 118 SKFRQIVSAVQYC----HQ--KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLD 171
Query: 587 AKTGS---AAMELLETSAVD-LESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKG 642
A G+ AA EL + D E +V+S G IL+ +++G + + +N L+ L+G
Sbjct: 172 AFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN--LKELRERVLRG 229
Query: 643 EQPLKDIVDPTLKSFQ-ENVLEELLVV 668
+ + P S EN+L+ LV+
Sbjct: 230 KYRI-----PFYMSTDCENLLKRFLVL 251
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 126/284 (44%), Gaps = 43/284 (15%)
Query: 430 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKN 489
++ G G V+ G + ++AV S S + F + + + ++ H+
Sbjct: 22 KLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP------DAFLAEANLMKQLQHQR 75
Query: 490 FVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLD----WAMRLRIAMGMAYCL 545
V L + EP ++ EY NGSL + L L M +IA GMA+
Sbjct: 76 LVRLYAVVTQ-EPI--YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 132
Query: 546 EHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW----NNTTAAKTGS------AAME 595
E + HR+L++++I +++ + KI+DF +N A+ G+ A E
Sbjct: 133 ERNY------IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE 186
Query: 596 LLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTL 654
+ ++S+V+SFG +L E++T GRI Y + N E ++ + +V P
Sbjct: 187 AINYGTFTIKSDVWSFGILLTEIVTHGRIPYP----GMTN--PEVIQNLERGYRMVRP-- 238
Query: 655 KSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKE-ITAME 697
+N EEL +++ C P+ RP+ + + L++ TA E
Sbjct: 239 ----DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATE 278
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 123/278 (44%), Gaps = 42/278 (15%)
Query: 430 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKN 489
++ G G V+ G + ++AV S S + F + + + ++ H+
Sbjct: 18 KLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP------DAFLAEANLMKQLQHQR 71
Query: 490 FVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLD----WAMRLRIAMGMAYCL 545
V L + EP ++ EY NGSL + L L M +IA GMA+
Sbjct: 72 LVRLYAVVTQ-EPI--YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 128
Query: 546 EHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW----NNTTAAKTGS------AAME 595
E + HR+L++++I +++ + KI+DF +N A+ G+ A E
Sbjct: 129 ERNY------IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE 182
Query: 596 LLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTL 654
+ ++S+V+SFG +L E++T GRI Y + N E ++ + +V P
Sbjct: 183 AINYGTFTIKSDVWSFGILLTEIVTHGRIPYP----GMTN--PEVIQNLERGYRMVRP-- 234
Query: 655 KSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKE 692
+N EEL +++ C P+ RP+ + + L++
Sbjct: 235 ----DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLED 268
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 126/284 (44%), Gaps = 43/284 (15%)
Query: 430 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKN 489
++ G G V+ G + ++AV S S + F + + + ++ H+
Sbjct: 16 KLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP------DAFLAEANLMKQLQHQR 69
Query: 490 FVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLD----WAMRLRIAMGMAYCL 545
V L + EP ++ EY NGSL + L L M +IA GMA+
Sbjct: 70 LVRLYAVVTQ-EPI--YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 126
Query: 546 EHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW----NNTTAAKTGS------AAME 595
E + HR+L++++I +++ + KI+DF +N A+ G+ A E
Sbjct: 127 ERNY------IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE 180
Query: 596 LLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTL 654
+ ++S+V+SFG +L E++T GRI Y + N E ++ + +V P
Sbjct: 181 AINYGTFTIKSDVWSFGILLTEIVTHGRIPYP----GMTN--PEVIQNLERGYRMVRP-- 232
Query: 655 KSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKE-ITAME 697
+N EEL +++ C P+ RP+ + + L++ TA E
Sbjct: 233 ----DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATE 272
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 129/290 (44%), Gaps = 37/290 (12%)
Query: 409 FVTGVPKLKRSELEAACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWS 468
+ G P + E+E + +G G G VY+G + +VK+ + +
Sbjct: 11 YFQGSPNYDKWEMERTDITMKHKLGG---GQYGEVYEGVWKK----YSLTVAVKTLKEDT 63
Query: 469 KNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEH 528
+E +F K+ + ++ H N V L+G C + PF ++ E+ G+L ++L +
Sbjct: 64 MEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPF--YIITEFMTYGNLLDYLRECNRQE 120
Query: 529 LDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF----WNNT 584
++ + L +A ++ +E++ + HR+L + + + E++ K++DF +T
Sbjct: 121 VNAVVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 178
Query: 585 TAAKTGS------AAMELLETSAVDLESNVYSFGTILFEMIT-GRISY-SIENGSLENWA 636
A G+ A E L + ++S+V++FG +L+E+ T G Y I+ +
Sbjct: 179 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 238
Query: 637 SEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGI 686
+ + E+P E E++ +++ C +P RPS I
Sbjct: 239 EKDYRMERP-------------EGCPEKVYELMRACWQWNPSDRPSFAEI 275
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 116/291 (39%), Gaps = 50/291 (17%)
Query: 435 FSDGTVGTVY----KGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNF 490
G+ G VY KG + E V +V A + +E F + + + N +
Sbjct: 18 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE--FLNEASVMKEFNCHHV 75
Query: 491 VNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLD------------WAMRLRIA 538
V L+G + +P +++ E G L +L E + M IA
Sbjct: 76 VRLLGVVSQGQP--TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 133
Query: 539 MGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN---TTAAKTGSAAM- 594
GMAY + HR+L + + + ED+ KI DF + T + G +
Sbjct: 134 DGMAYLNAN------KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLL 187
Query: 595 -------ELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLK 647
E L+ S+V+SFG +L+E+ T L + L EQ L+
Sbjct: 188 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT-----------LAEQPYQGLSNEQVLR 236
Query: 648 DIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEP 698
+++ L +N + LL +++ C +PK RPS I + +KE MEP
Sbjct: 237 FVMEGGLLDKPDNCPDMLLELMRMCWQYNPKMRPSFLEIISSIKE--EMEP 285
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 123/278 (44%), Gaps = 42/278 (15%)
Query: 430 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKN 489
++ G G V+ G + ++AV S S + F + + + ++ H+
Sbjct: 17 KLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP------DAFLAEANLMKQLQHQR 70
Query: 490 FVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLD----WAMRLRIAMGMAYCL 545
V L + EP ++ EY NGSL + L L M +IA GMA+
Sbjct: 71 LVRLYAVVTQ-EPI--YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 127
Query: 546 EHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW----NNTTAAKTGS------AAME 595
E + HR+L++++I +++ + KI+DF +N A+ G+ A E
Sbjct: 128 ERNY------IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE 181
Query: 596 LLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTL 654
+ ++S+V+SFG +L E++T GRI Y + N E ++ + +V P
Sbjct: 182 AINYGTFTIKSDVWSFGILLTEIVTHGRIPYP----GMTN--PEVIQNLERGYRMVRP-- 233
Query: 655 KSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKE 692
+N EEL +++ C P+ RP+ + + L++
Sbjct: 234 ----DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLED 267
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 126/284 (44%), Gaps = 43/284 (15%)
Query: 430 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKN 489
++ G G V+ G + ++AV S S + F + + + ++ H+
Sbjct: 26 KLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP------DAFLAEANLMKQLQHQR 79
Query: 490 FVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLD----WAMRLRIAMGMAYCL 545
V L + EP ++ EY NGSL + L L M +IA GMA+
Sbjct: 80 LVRLYAVVTQ-EPI--YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 136
Query: 546 EHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW----NNTTAAKTGS------AAME 595
E + HR+L++++I +++ + KI+DF +N A+ G+ A E
Sbjct: 137 ERNY------IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPE 190
Query: 596 LLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTL 654
+ ++S+V+SFG +L E++T GRI Y + N E ++ + +V P
Sbjct: 191 AINYGTFTIKSDVWSFGILLTEIVTHGRIPYP----GMTN--PEVIQNLERGYRMVRP-- 242
Query: 655 KSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKE-ITAME 697
+N EEL +++ C P+ RP+ + + L++ TA E
Sbjct: 243 ----DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATE 282
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 123/278 (44%), Gaps = 42/278 (15%)
Query: 430 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKN 489
++ G G V+ G + ++AV S S + F + + + ++ H+
Sbjct: 16 KLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP------DAFLAEANLMKQLQHQR 69
Query: 490 FVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLD----WAMRLRIAMGMAYCL 545
V L + EP ++ EY NGSL + L L M +IA GMA+
Sbjct: 70 LVRLYAVVTQ-EPI--YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 126
Query: 546 EHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW----NNTTAAKTGS------AAME 595
E + HR+L++++I +++ + KI+DF +N A+ G+ A E
Sbjct: 127 ERNY------IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE 180
Query: 596 LLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTL 654
+ ++S+V+SFG +L E++T GRI Y + N E ++ + +V P
Sbjct: 181 AINYGTFTIKSDVWSFGILLTEIVTHGRIPYP----GMTN--PEVIQNLERGYRMVRP-- 232
Query: 655 KSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKE 692
+N EEL +++ C P+ RP+ + + L++
Sbjct: 233 ----DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLED 266
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 126/284 (44%), Gaps = 43/284 (15%)
Query: 430 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKN 489
++ G G V+ G + ++AV S S + F + + + ++ H+
Sbjct: 21 KLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP------DAFLAEANLMKQLQHQR 74
Query: 490 FVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLD----WAMRLRIAMGMAYCL 545
V L + EP ++ EY NGSL + L L M +IA GMA+
Sbjct: 75 LVRLYAVVTQ-EPI--YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 131
Query: 546 EHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW----NNTTAAKTGS------AAME 595
E + HR+L++++I +++ + KI+DF +N A+ G+ A E
Sbjct: 132 ERNY------IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPE 185
Query: 596 LLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTL 654
+ ++S+V+SFG +L E++T GRI Y + N E ++ + +V P
Sbjct: 186 AINYGTFTIKSDVWSFGILLTEIVTHGRIPYP----GMTN--PEVIQNLERGYRMVRP-- 237
Query: 655 KSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKE-ITAME 697
+N EEL +++ C P+ RP+ + + L++ TA E
Sbjct: 238 ----DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATE 277
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 125/282 (44%), Gaps = 45/282 (15%)
Query: 428 FSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNH 487
F IGS G G V+ G + ++A+ + + + E F ++ + + K++H
Sbjct: 12 FVQEIGS---GQFGLVHLGYWLNKDKVAIKTIREGAMS------EEDFIEEAEVMMKLSH 62
Query: 488 KNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQE----AEHLDWAMRLRIAMGMAY 543
V L G C E P +V E+ +G L ++L Q AE L M L + GMAY
Sbjct: 63 PKLVQLYGVCLEQAPIC--LVTEFMEHGCLSDYLRTQRGLFAAETL-LGMCLDVCEGMAY 119
Query: 544 CLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF----WNNTTAAKTGS------AA 593
E + HR+L + + + E+ K+SDF ++ + TG+ A+
Sbjct: 120 LEE------ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWAS 173
Query: 594 MELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDP 652
E+ S +S+V+SFG +++E+ + G+I Y EN S SE ++ + P
Sbjct: 174 PEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY--ENRS----NSEVVEDISTGFRLYKP 227
Query: 653 TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEIT 694
L S + ++ +C P+ RP+ + +L EI
Sbjct: 228 RLAS------THVYQIMNHCWRERPEDRPAFSRLLRQLAEIA 263
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 123/278 (44%), Gaps = 42/278 (15%)
Query: 430 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKN 489
++ G G V+ G + ++AV S S + F + + + ++ H+
Sbjct: 22 KLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP------DAFLAEANLMKQLQHQR 75
Query: 490 FVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLD----WAMRLRIAMGMAYCL 545
V L + EP ++ EY NGSL + L L M +IA GMA+
Sbjct: 76 LVRLYAVVTQ-EPI--YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 132
Query: 546 EHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW----NNTTAAKTGS------AAME 595
E + HR+L++++I +++ + KI+DF +N A+ G+ A E
Sbjct: 133 ERNY------IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPE 186
Query: 596 LLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTL 654
+ ++S+V+SFG +L E++T GRI Y + N E ++ + +V P
Sbjct: 187 AINYGTFTIKSDVWSFGILLTEIVTHGRIPYP----GMTN--PEVIQNLERGYRMVRP-- 238
Query: 655 KSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKE 692
+N EEL +++ C P+ RP+ + + L++
Sbjct: 239 ----DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLED 272
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 101/242 (41%), Gaps = 52/242 (21%)
Query: 486 NHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRL---------- 535
HKN ++L+G C +D P ++ EY+ G+L E+L + ++++ +
Sbjct: 99 KHKNIIHLLGACTQDGPL--YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 536 --------RIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF--------- 578
++A GM Y HR+L + ++ +TE+ KI+DF
Sbjct: 157 KDLVSCTYQLARGMEYLASQ------KCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 579 SFWNNTTAAKTGSAAM--ELLETSAVDLESNVYSFGTILFEMIT--GRISYSIENGSLEN 634
++ TT + M E L +S+V+SFG +++E+ T G I L
Sbjct: 211 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK 270
Query: 635 WASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEIT 694
E + ++P N EL +++++C H P QRP+ + + L I
Sbjct: 271 LLKEGHRMDKP-------------ANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 317
Query: 695 AM 696
+
Sbjct: 318 TL 319
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 123/278 (44%), Gaps = 42/278 (15%)
Query: 430 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKN 489
++ G G V+ G + ++AV S S + F + + + ++ H+
Sbjct: 16 KLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP------DAFLAEANLMKQLQHQR 69
Query: 490 FVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLD----WAMRLRIAMGMAYCL 545
V L + EP ++ EY NGSL + L L M +IA GMA+
Sbjct: 70 LVRLYAVVTQ-EPI--YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 126
Query: 546 EHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW----NNTTAAKTGS------AAME 595
E + HR+L++++I +++ + KI+DF +N A+ G+ A E
Sbjct: 127 ERNY------IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPE 180
Query: 596 LLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTL 654
+ ++S+V+SFG +L E++T GRI Y + N E ++ + +V P
Sbjct: 181 AINYGTFTIKSDVWSFGILLTEIVTHGRIPYP----GMTN--PEVIQNLERGYRMVRP-- 232
Query: 655 KSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKE 692
+N EEL +++ C P+ RP+ + + L++
Sbjct: 233 ----DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLED 266
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 127/287 (44%), Gaps = 37/287 (12%)
Query: 412 GVPKLKRSELEAACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNL 471
G P + E+E + +G G G VY+G + +VK+ + + +
Sbjct: 1 GSPNYDKWEMERTDITMKHKLGG---GQYGEVYEGVWKK----YSLTVAVKTLKEDTMEV 53
Query: 472 ESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDW 531
E +F K+ + ++ H N V L+G C + PF ++ E+ G+L ++L + +
Sbjct: 54 E-EFLKEAAVMKEIKHPNLVQLLGVCTREPPF--YIIIEFMTYGNLLDYLRECNRQEVSA 110
Query: 532 AMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF----WNNTTAA 587
+ L +A ++ +E++ + HR+L + + + E++ K++DF +T A
Sbjct: 111 VVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 168
Query: 588 KTGS------AAMELLETSAVDLESNVYSFGTILFEMIT-GRISY-SIENGSLENWASEY 639
G+ A E L + ++S+V++FG +L+E+ T G Y I+ + +
Sbjct: 169 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKD 228
Query: 640 LKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGI 686
+ E+P E E++ +++ C +P RPS I
Sbjct: 229 YRMERP-------------EGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 127/287 (44%), Gaps = 37/287 (12%)
Query: 412 GVPKLKRSELEAACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNL 471
G P + E+E + +G G G VY+G + +VK+ + + +
Sbjct: 1 GSPNYDKWEMERTDITMKHKLGG---GQYGEVYEGVWKK----YSLTVAVKTLKEDTMEV 53
Query: 472 ESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDW 531
E +F K+ + ++ H N V L+G C + PF ++ E+ G+L ++L + +
Sbjct: 54 E-EFLKEAAVMKEIKHPNLVQLLGVCTREPPF--YIIIEFMTYGNLLDYLRECNRQEVSA 110
Query: 532 AMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF----WNNTTAA 587
+ L +A ++ +E++ + HR+L + + + E++ K++DF +T A
Sbjct: 111 VVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 168
Query: 588 KTGS------AAMELLETSAVDLESNVYSFGTILFEMIT-GRISY-SIENGSLENWASEY 639
G+ A E L + ++S+V++FG +L+E+ T G Y I+ + +
Sbjct: 169 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKD 228
Query: 640 LKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGI 686
+ E+P E E++ +++ C +P RPS I
Sbjct: 229 YRMERP-------------EGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 100/242 (41%), Gaps = 52/242 (21%)
Query: 486 NHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRL---------- 535
HKN + L+G C +D P ++ EY+ G+L E+L + ++++ +
Sbjct: 99 KHKNIITLLGACTQDGPL--YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 536 --------RIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF--------- 578
++A GM Y HR+L + ++ +TE+ KI+DF
Sbjct: 157 KDLVSCTYQLARGMEYLASQ------KCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 579 SFWNNTTAAKTGSAAM--ELLETSAVDLESNVYSFGTILFEMIT--GRISYSIENGSLEN 634
++ TT + M E L +S+V+SFG +++E+ T G I L
Sbjct: 211 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK 270
Query: 635 WASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEIT 694
E + ++P N EL +++++C H P QRP+ + + L I
Sbjct: 271 LLKEGHRMDKP-------------ANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 317
Query: 695 AM 696
+
Sbjct: 318 TL 319
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 130/293 (44%), Gaps = 38/293 (12%)
Query: 407 KAFVTGV-PKLKRSELEAACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRA 465
K + GV P + E+E + +G G G VY+G + +VK+
Sbjct: 202 KPTIYGVSPNYDKWEMERTDITMKHKLGG---GQYGEVYEGVWKK----YSLTVAVKTLK 254
Query: 466 DWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQE 525
+ + +E +F K+ + ++ H N V L+G C + PF ++ E+ G+L ++L
Sbjct: 255 EDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPF--YIITEFMTYGNLLDYLRECN 311
Query: 526 AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF----W 581
+ + + L +A ++ +E++ + HRNL + + + E++ K++DF
Sbjct: 312 RQEVSAVVLLYMATQISSAMEYLEKKN--FIHRNLAARNCLVGENHLVKVADFGLSRLMT 369
Query: 582 NNTTAAKTGS------AAMELLETSAVDLESNVYSFGTILFEMIT-GRISY-SIENGSLE 633
+T A G+ A E L + ++S+V++FG +L+E+ T G Y I+ +
Sbjct: 370 GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY 429
Query: 634 NWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGI 686
+ + E+P E E++ +++ C +P RPS I
Sbjct: 430 ELLEKDYRMERP-------------EGCPEKVYELMRACWQWNPSDRPSFAEI 469
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 100/241 (41%), Gaps = 52/241 (21%)
Query: 487 HKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRL----------- 535
HKN +NL+G C +D P ++ Y+ G+L E+L + ++++ +
Sbjct: 100 HKNIINLLGACTQDGPL--YVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 536 -------RIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF---------S 579
++A GM Y HR+L + ++ +TE+ KI+DF
Sbjct: 158 DLVSCTYQLARGMEYLASQ------KCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 580 FWNNTTAAKTGSAAM--ELLETSAVDLESNVYSFGTILFEMIT--GRISYSIENGSLENW 635
++ TT + M E L +S+V+SFG +++E+ T G I L
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 271
Query: 636 ASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITA 695
E + ++P N EL +++++C H P QRP+ + + L I
Sbjct: 272 LKEGHRMDKP-------------ANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318
Query: 696 M 696
+
Sbjct: 319 L 319
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 90/185 (48%), Gaps = 22/185 (11%)
Query: 470 NLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHL--HIQEAE 527
+L+ FR+ + + +NH N V L E ++ T +V EY+ G +F++L H + E
Sbjct: 57 SLQKLFRE-VRIMKILNHPNIVKLFEVIETEK--TLYLVMEYASGGEVFDYLVAHGRMKE 113
Query: 528 HLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAA 587
A +I + YC HQ I HR+L++ ++ L D KI+DF F N T
Sbjct: 114 KEARAKFRQIVSAVQYC----HQKY--IVHRDLKAENLLLDGDMNIKIADFGFSNEFTVG 167
Query: 588 KT-----GS---AAMELLETSAVD-LESNVYSFGTILFEMITGRISYSIENGSLENWASE 638
GS AA EL + D E +V+S G IL+ +++G + + +N L+
Sbjct: 168 NKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN--LKELRER 225
Query: 639 YLKGE 643
L+G+
Sbjct: 226 VLRGK 230
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 99/241 (41%), Gaps = 52/241 (21%)
Query: 487 HKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRL----------- 535
HKN +NL+G C +D P ++ EY+ G+L E+L + ++ + +
Sbjct: 100 HKNIINLLGACTQDGPL--YVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFK 157
Query: 536 -------RIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF---WNNTT 585
++A GM Y HR+L + ++ +TE+ KI+DF NN
Sbjct: 158 DLVSCTYQLARGMEYLASQ------KCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 586 AAKTGS--------AAMELLETSAVDLESNVYSFGTILFEMIT--GRISYSIENGSLENW 635
K + A E L +S+V+SFG +++E+ T G I L
Sbjct: 212 XXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 271
Query: 636 ASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITA 695
E + ++P N EL +++++C H P QRP+ + + L I
Sbjct: 272 LKEGHRMDKP-------------ANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318
Query: 696 M 696
+
Sbjct: 319 L 319
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 102/218 (46%), Gaps = 27/218 (12%)
Query: 419 SELEAACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKS-RADWSKNLESQFRK 477
+E+ +C +IG+ G G VYKG L + ++K+ +A +++ F
Sbjct: 39 TEIHPSCVTRQKVIGA---GEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLG 95
Query: 478 KIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEH--LDWAMRL 535
+ + + +H N + L G + +P M++ EY NG+L + L ++ E L L
Sbjct: 96 EAGIMGQFSHHNIIRLEGVISKYKPM--MIITEYMENGALDKFLREKDGEFSVLQLVGML 153
Query: 536 R-IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFS----FWNNTTAAKTG 590
R IA GM Y L +M+ + HR+L + +I + + K+SDF ++ A T
Sbjct: 154 RGIAAGMKY-LANMNYV-----HRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTT 207
Query: 591 SA--------AMELLETSAVDLESNVYSFGTILFEMIT 620
S A E + S+V+SFG +++E++T
Sbjct: 208 SGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMT 245
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 118/261 (45%), Gaps = 34/261 (13%)
Query: 438 GTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYC 497
G G VY+G + +VK+ + + +E +F K+ + ++ H N V L+G C
Sbjct: 22 GQYGEVYEGVWKK----YSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVC 76
Query: 498 EEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAH 557
+ PF ++ E+ G+L ++L + + + L +A ++ +E++ + H
Sbjct: 77 TREPPF--YIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN--FIH 132
Query: 558 RNLQSSSIYLTEDYAAKISDFSF----WNNTTAAKTGS------AAMELLETSAVDLESN 607
R+L + + + E++ K++DF +T A G+ A E L + ++S+
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSD 192
Query: 608 VYSFGTILFEMIT-GRISY-SIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEEL 665
V++FG +L+E+ T G Y I+ + + + E+P E E++
Sbjct: 193 VWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMERP-------------EGCPEKV 239
Query: 666 LVVIKNCVHPDPKQRPSMRGI 686
+++ C +P RPS I
Sbjct: 240 YELMRACWQWNPSDRPSFAEI 260
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 123/278 (44%), Gaps = 42/278 (15%)
Query: 430 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKN 489
++ G G V+ G + ++AV S S + F + + + ++ H+
Sbjct: 11 KLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP------DAFLAEANLMKQLQHQR 64
Query: 490 FVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLD----WAMRLRIAMGMAYCL 545
V L + EP ++ EY NGSL + L L M +IA GMA+
Sbjct: 65 LVRLYAVVTQ-EPI--YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 121
Query: 546 EHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW----NNTTAAKTGS------AAME 595
E + HR+L++++I +++ + KI+DF +N A+ G+ A E
Sbjct: 122 ERNY------IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPE 175
Query: 596 LLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTL 654
+ ++S+V+SFG +L E++T GRI Y + N E ++ + +V P
Sbjct: 176 AINYGTFTIKSDVWSFGILLTEIVTHGRIPYP----GMTN--PEVIQNLERGYRMVRP-- 227
Query: 655 KSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKE 692
+N EEL +++ C P+ RP+ + + L++
Sbjct: 228 ----DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLED 261
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 119/261 (45%), Gaps = 34/261 (13%)
Query: 438 GTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYC 497
G G VY+G + +VK+ + + +E +F K+ + ++ H N V L+G C
Sbjct: 25 GQYGEVYEGVWKK----YSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVC 79
Query: 498 EEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAH 557
+ PF ++ E+ G+L ++L + ++ + L +A ++ +E++ + H
Sbjct: 80 TREPPF--YIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN--FIH 135
Query: 558 RNLQSSSIYLTEDYAAKISDFSF----WNNTTAAKTGS------AAMELLETSAVDLESN 607
R+L + + + E++ K++DF +T A G+ A E L + ++S+
Sbjct: 136 RDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSD 195
Query: 608 VYSFGTILFEMIT-GRISY-SIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEEL 665
V++FG +L+E+ T G Y I+ + + + E+P E E++
Sbjct: 196 VWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERP-------------EGCPEKV 242
Query: 666 LVVIKNCVHPDPKQRPSMRGI 686
+++ C +P RPS I
Sbjct: 243 YELMRACWQWNPSDRPSFAEI 263
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 119/261 (45%), Gaps = 34/261 (13%)
Query: 438 GTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYC 497
G G VY+G + +VK+ + + +E +F K+ + ++ H N V L+G C
Sbjct: 29 GQYGEVYEGVWKK----YSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVC 83
Query: 498 EEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAH 557
+ PF ++ E+ G+L ++L + ++ + L +A ++ +E++ + H
Sbjct: 84 TREPPF--YIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN--FIH 139
Query: 558 RNLQSSSIYLTEDYAAKISDFSF----WNNTTAAKTGS------AAMELLETSAVDLESN 607
R+L + + + E++ K++DF +T A G+ A E L + ++S+
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 199
Query: 608 VYSFGTILFEMIT-GRISY-SIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEEL 665
V++FG +L+E+ T G Y I+ + + + E+P E E++
Sbjct: 200 VWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERP-------------EGCPEKV 246
Query: 666 LVVIKNCVHPDPKQRPSMRGI 686
+++ C +P RPS I
Sbjct: 247 YELMRACWQWNPSDRPSFAEI 267
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 100/241 (41%), Gaps = 52/241 (21%)
Query: 487 HKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRL----------- 535
HKN +NL+G C +D P ++ Y+ G+L E+L + ++++ +
Sbjct: 100 HKNIINLLGACTQDGPL--YVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 536 -------RIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF---------S 579
++A GM Y HR+L + ++ +TE+ KI+DF
Sbjct: 158 DLVSCTYQLARGMEYLASQ------KCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 580 FWNNTTAAKTGSAAM--ELLETSAVDLESNVYSFGTILFEMIT--GRISYSIENGSLENW 635
++ TT + M E L +S+V+SFG +++E+ T G I L
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 271
Query: 636 ASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITA 695
E + ++P N EL +++++C H P QRP+ + + L I
Sbjct: 272 LKEGHRMDKP-------------ANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318
Query: 696 M 696
+
Sbjct: 319 L 319
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 116/291 (39%), Gaps = 50/291 (17%)
Query: 435 FSDGTVGTVY----KGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNF 490
G+ G VY KG + E V +V A + +E F + + + N +
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE--FLNEASVMKEFNCHHV 77
Query: 491 VNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLD------------WAMRLRIA 538
V L+G + +P +++ E G L +L E + M IA
Sbjct: 78 VRLLGVVSQGQP--TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 135
Query: 539 MGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN---TTAAKTGSAAM- 594
GMAY + HR+L + + + ED+ KI DF + T + G +
Sbjct: 136 DGMAYLNAN------KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLL 189
Query: 595 -------ELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLK 647
E L+ S+V+SFG +L+E+ T L + L EQ L+
Sbjct: 190 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT-----------LAEQPYQGLSNEQVLR 238
Query: 648 DIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEP 698
+++ L +N + LL +++ C +PK RPS I + +KE MEP
Sbjct: 239 FVMEGGLLDKPDNCPDMLLELMRMCWQYNPKMRPSFLEIISSIKE--EMEP 287
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 127/287 (44%), Gaps = 37/287 (12%)
Query: 412 GVPKLKRSELEAACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNL 471
G P + E+E + +G G G VY+G + +VK+ + + +
Sbjct: 1 GSPNYDKWEMERTDITMKHKLGG---GQYGEVYEGVWKK----YSLTVAVKTLKEDTMEV 53
Query: 472 ESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDW 531
E +F K+ + ++ H N V L+G C + PF ++ E+ G+L ++L + +
Sbjct: 54 E-EFLKEAAVMKEIKHPNLVQLLGVCTREPPF--YIITEFMTYGNLLDYLRECNRQEVSA 110
Query: 532 AMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF----WNNTTAA 587
+ L +A ++ +E++ + HR+L + + + E++ K++DF +T A
Sbjct: 111 VVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 168
Query: 588 KTGS------AAMELLETSAVDLESNVYSFGTILFEMIT-GRISY-SIENGSLENWASEY 639
G+ A E L + ++S+V++FG +L+E+ T G Y I+ + +
Sbjct: 169 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKD 228
Query: 640 LKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGI 686
+ E+P E E++ +++ C +P RPS I
Sbjct: 229 YRMERP-------------EGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 127/287 (44%), Gaps = 37/287 (12%)
Query: 412 GVPKLKRSELEAACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNL 471
G P + E+E + +G G G VY+G + +VK+ + + +
Sbjct: 1 GSPNYDKWEMERTDITMKHKLGG---GQYGEVYEGVWKK----YSLTVAVKTLKEDTMEV 53
Query: 472 ESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDW 531
E +F K+ + ++ H N V L+G C + PF ++ E+ G+L ++L + +
Sbjct: 54 E-EFLKEAAVMKEIKHPNLVQLLGVCTREPPF--YIITEFMTYGNLLDYLRECNRQEVSA 110
Query: 532 AMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF----WNNTTAA 587
+ L +A ++ +E++ + HR+L + + + E++ K++DF +T A
Sbjct: 111 VVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 168
Query: 588 KTGS------AAMELLETSAVDLESNVYSFGTILFEMIT-GRISY-SIENGSLENWASEY 639
G+ A E L + ++S+V++FG +L+E+ T G Y I+ + +
Sbjct: 169 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKD 228
Query: 640 LKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGI 686
+ E+P E E++ +++ C +P RPS I
Sbjct: 229 YRMERP-------------EGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 119/261 (45%), Gaps = 34/261 (13%)
Query: 438 GTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYC 497
G G VY+G + +VK+ + + +E +F K+ + ++ H N V L+G C
Sbjct: 29 GQYGEVYEGVWKK----YSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVC 83
Query: 498 EEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAH 557
+ PF ++ E+ G+L ++L + ++ + L +A ++ +E++ + H
Sbjct: 84 TREPPF--YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN--FIH 139
Query: 558 RNLQSSSIYLTEDYAAKISDFSF----WNNTTAAKTGS------AAMELLETSAVDLESN 607
R+L + + + E++ K++DF +T A G+ A E L + ++S+
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSD 199
Query: 608 VYSFGTILFEMIT-GRISY-SIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEEL 665
V++FG +L+E+ T G Y I+ + + + E+P E E++
Sbjct: 200 VWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERP-------------EGCPEKV 246
Query: 666 LVVIKNCVHPDPKQRPSMRGI 686
+++ C +P RPS I
Sbjct: 247 YELMRACWQWNPSDRPSFAEI 267
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 115/291 (39%), Gaps = 50/291 (17%)
Query: 435 FSDGTVGTVY----KGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNF 490
G+ G VY KG + E V +V A + +E F + + + N +
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE--FLNEASVMKEFNCHHV 84
Query: 491 VNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLD------------WAMRLRIA 538
V L+G + +P +++ E G L +L E + M IA
Sbjct: 85 VRLLGVVSQGQP--TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 142
Query: 539 MGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN---TTAAKTGSAAM- 594
GMAY + HR+L + + + ED+ KI DF + T + G +
Sbjct: 143 DGMAYLNAN------KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLL 196
Query: 595 -------ELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLK 647
E L+ S+V+SFG +L+E+ T L + L EQ L+
Sbjct: 197 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT-----------LAEQPYQGLSNEQVLR 245
Query: 648 DIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEP 698
+++ L +N + L +++ C +PK RPS I + +KE MEP
Sbjct: 246 FVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE--EMEP 294
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 118/261 (45%), Gaps = 34/261 (13%)
Query: 438 GTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYC 497
G G VY+G + +VK+ + + +E +F K+ + ++ H N V L+G C
Sbjct: 22 GQFGEVYEGVWKK----YSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVC 76
Query: 498 EEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAH 557
+ PF ++ E+ G+L ++L + + + L +A ++ +E++ + H
Sbjct: 77 TREPPF--YIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN--FIH 132
Query: 558 RNLQSSSIYLTEDYAAKISDFSF----WNNTTAAKTGS------AAMELLETSAVDLESN 607
R+L + + + E++ K++DF +T A G+ A E L + ++S+
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSD 192
Query: 608 VYSFGTILFEMIT-GRISY-SIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEEL 665
V++FG +L+E+ T G Y I+ + + + E+P E E++
Sbjct: 193 VWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMERP-------------EGCPEKV 239
Query: 666 LVVIKNCVHPDPKQRPSMRGI 686
+++ C +P RPS I
Sbjct: 240 YELMRACWQWNPSDRPSFAEI 260
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 122/274 (44%), Gaps = 53/274 (19%)
Query: 430 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKN 489
++ G G V+ G ++ ++AV + + + F ++ + + + H
Sbjct: 15 KLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMS------VQAFLEEANLMKTLQHDK 68
Query: 490 FVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEA------EHLDWAMRLRIAMGMAY 543
V L ++EP ++ E+ GSL + L E + +D++ + IA GMAY
Sbjct: 69 LVRLYAVVTKEEPI--YIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQ--IAEGMAY 124
Query: 544 CLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW----NNTTAAKTGS------AA 593
+E + + HR+L+++++ ++E KI+DF +N A+ G+ A
Sbjct: 125 -IERKNYI-----HRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTA 178
Query: 594 MELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDP 652
E + ++SNV+SFG +L+E++T G+I Y + D++
Sbjct: 179 PEAINFGCFTIKSNVWSFGILLYEIVTYGKIPYPGRTNA----------------DVMSA 222
Query: 653 TLKSFQ----ENVLEELLVVIKNCVHPDPKQRPS 682
+ ++ EN +EL ++K C ++RP+
Sbjct: 223 LSQGYRMPRMENCPDELYDIMKMCWKEKAEERPT 256
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 90/185 (48%), Gaps = 22/185 (11%)
Query: 470 NLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHL--HIQEAE 527
+L+ FR+ + + +NH N V L E ++ T ++ EY+ G +F++L H + E
Sbjct: 54 SLQKLFRE-VRIMKILNHPNIVKLFEVIETEK--TLYLIMEYASGGEVFDYLVAHGRMKE 110
Query: 528 HLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAA 587
+ +I + YC HQ I HR+L++ ++ L D KI+DF F N T
Sbjct: 111 KEARSKFRQIVSAVQYC----HQ--KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVG 164
Query: 588 KT-----GS---AAMELLETSAVD-LESNVYSFGTILFEMITGRISYSIENGSLENWASE 638
GS AA EL + D E +V+S G IL+ +++G + + +N L+
Sbjct: 165 GKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN--LKELRER 222
Query: 639 YLKGE 643
L+G+
Sbjct: 223 VLRGK 227
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 119/261 (45%), Gaps = 34/261 (13%)
Query: 438 GTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYC 497
G G VY+G + +VK+ + + +E +F K+ + ++ H N V L+G C
Sbjct: 28 GQYGEVYEGVWKK----YSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVC 82
Query: 498 EEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAH 557
+ PF ++ E+ G+L ++L + ++ + L +A ++ +E++ + H
Sbjct: 83 TREPPF--YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN--FIH 138
Query: 558 RNLQSSSIYLTEDYAAKISDFSF----WNNTTAAKTGS------AAMELLETSAVDLESN 607
R+L + + + E++ K++DF +T A G+ A E L + ++S+
Sbjct: 139 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 198
Query: 608 VYSFGTILFEMIT-GRISY-SIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEEL 665
V++FG +L+E+ T G Y I+ + + + E+P E E++
Sbjct: 199 VWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERP-------------EGCPEKV 245
Query: 666 LVVIKNCVHPDPKQRPSMRGI 686
+++ C +P RPS I
Sbjct: 246 YELMRACWQWNPSDRPSFAEI 266
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 119/261 (45%), Gaps = 34/261 (13%)
Query: 438 GTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYC 497
G G VY+G + +VK+ + + +E +F K+ + ++ H N V L+G C
Sbjct: 24 GQYGEVYEGVWKK----YSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVC 78
Query: 498 EEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAH 557
+ PF ++ E+ G+L ++L + ++ + L +A ++ +E++ + H
Sbjct: 79 TREPPF--YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN--FIH 134
Query: 558 RNLQSSSIYLTEDYAAKISDFSF----WNNTTAAKTGS------AAMELLETSAVDLESN 607
R+L + + + E++ K++DF +T A G+ A E L + ++S+
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 194
Query: 608 VYSFGTILFEMIT-GRISY-SIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEEL 665
V++FG +L+E+ T G Y I+ + + + E+P E E++
Sbjct: 195 VWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERP-------------EGCPEKV 241
Query: 666 LVVIKNCVHPDPKQRPSMRGI 686
+++ C +P RPS I
Sbjct: 242 YELMRACWQWNPSDRPSFAEI 262
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 119/261 (45%), Gaps = 34/261 (13%)
Query: 438 GTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYC 497
G G VY+G + +VK+ + + +E +F K+ + ++ H N V L+G C
Sbjct: 29 GQYGEVYEGVWKK----YSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVC 83
Query: 498 EEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAH 557
+ PF ++ E+ G+L ++L + ++ + L +A ++ +E++ + H
Sbjct: 84 TREPPF--YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN--FIH 139
Query: 558 RNLQSSSIYLTEDYAAKISDFSF----WNNTTAAKTGS------AAMELLETSAVDLESN 607
R+L + + + E++ K++DF +T A G+ A E L + ++S+
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 199
Query: 608 VYSFGTILFEMIT-GRISY-SIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEEL 665
V++FG +L+E+ T G Y I+ + + + E+P E E++
Sbjct: 200 VWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERP-------------EGCPEKV 246
Query: 666 LVVIKNCVHPDPKQRPSMRGI 686
+++ C +P RPS I
Sbjct: 247 YELMRACWQWNPSDRPSFAEI 267
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 125/284 (44%), Gaps = 43/284 (15%)
Query: 430 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKN 489
++ G G V+ G + ++AV S S + F + + + ++ H+
Sbjct: 16 KLVERLGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSP------DAFLAEANLMKQLQHQR 69
Query: 490 FVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLD----WAMRLRIAMGMAYCL 545
V L + EP ++ EY NGSL + L L M +IA GMA+
Sbjct: 70 LVRLYAVVTQ-EPI--YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 126
Query: 546 EHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW----NNTTAAKTGS------AAME 595
E + HR+L++++I +++ + KI+DF + A+ G+ A E
Sbjct: 127 ERNY------IHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPE 180
Query: 596 LLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTL 654
+ ++S+V+SFG +L E++T GRI Y + N E ++ + +V P
Sbjct: 181 AINYGTFTIKSDVWSFGILLTEIVTHGRIPYP----GMTN--PEVIQNLERGYRMVRP-- 232
Query: 655 KSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKE-ITAME 697
+N EEL +++ C P+ RP+ + + L++ TA E
Sbjct: 233 ----DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATE 272
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 119/261 (45%), Gaps = 34/261 (13%)
Query: 438 GTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYC 497
G G VY+G + +VK+ + + +E +F K+ + ++ H N V L+G C
Sbjct: 25 GQYGEVYEGVWKK----YSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVC 79
Query: 498 EEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAH 557
+ PF ++ E+ G+L ++L + ++ + L +A ++ +E++ + H
Sbjct: 80 TREPPF--YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN--FIH 135
Query: 558 RNLQSSSIYLTEDYAAKISDFSF----WNNTTAAKTGS------AAMELLETSAVDLESN 607
R+L + + + E++ K++DF +T A G+ A E L + ++S+
Sbjct: 136 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSD 195
Query: 608 VYSFGTILFEMIT-GRISY-SIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEEL 665
V++FG +L+E+ T G Y I+ + + + E+P E E++
Sbjct: 196 VWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERP-------------EGCPEKV 242
Query: 666 LVVIKNCVHPDPKQRPSMRGI 686
+++ C +P RPS I
Sbjct: 243 YELMRACWQWNPSDRPSFAEI 263
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 128/290 (44%), Gaps = 54/290 (18%)
Query: 430 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKN 489
++ G G V+ G ++ ++AV + + + F ++ + + + H
Sbjct: 16 KLVKRLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMS------VQAFLEEANLMKTLQHDK 69
Query: 490 FVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEA------EHLDWAMRLRIAMGMAY 543
V L +EP ++ EY GSL + L E + +D++ + IA GMAY
Sbjct: 70 LVRLYAVVTREEPI--YIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQ--IAEGMAY 125
Query: 544 CLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW----NNTTAAKTGS------AA 593
+E + + HR+L+++++ ++E KI+DF +N A+ G+ A
Sbjct: 126 -IERKNYI-----HRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTA 179
Query: 594 MELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDP 652
E + ++S+V+SFG +L+E++T G+I Y + D++
Sbjct: 180 PEAINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNA----------------DVMTA 223
Query: 653 TLKSFQ----ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI-TAME 697
+ ++ EN +EL ++K C ++RP+ + + L + TA E
Sbjct: 224 LSQGYRMPRVENCPDELYDIMKMCWKEKAEERPTFDYLQSVLDDFYTATE 273
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 119/261 (45%), Gaps = 34/261 (13%)
Query: 438 GTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYC 497
G G VY+G + +VK+ + + +E +F K+ + ++ H N V L+G C
Sbjct: 29 GQYGEVYEGVWKK----YSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVC 83
Query: 498 EEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAH 557
+ PF ++ E+ G+L ++L + ++ + L +A ++ +E++ + H
Sbjct: 84 TREPPF--YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN--FIH 139
Query: 558 RNLQSSSIYLTEDYAAKISDFSF----WNNTTAAKTGS------AAMELLETSAVDLESN 607
R+L + + + E++ K++DF +T A G+ A E L + ++S+
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 199
Query: 608 VYSFGTILFEMIT-GRISY-SIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEEL 665
V++FG +L+E+ T G Y I+ + + + E+P E E++
Sbjct: 200 VWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERP-------------EGCPEKV 246
Query: 666 LVVIKNCVHPDPKQRPSMRGI 686
+++ C +P RPS I
Sbjct: 247 YELMRACWQWNPSDRPSFAEI 267
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 119/261 (45%), Gaps = 34/261 (13%)
Query: 438 GTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYC 497
G G VY+G + +VK+ + + +E +F K+ + ++ H N V L+G C
Sbjct: 24 GQYGEVYEGVWKK----YSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVC 78
Query: 498 EEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAH 557
+ PF ++ E+ G+L ++L + ++ + L +A ++ +E++ + H
Sbjct: 79 TREPPF--YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN--FIH 134
Query: 558 RNLQSSSIYLTEDYAAKISDFSF----WNNTTAAKTGS------AAMELLETSAVDLESN 607
R+L + + + E++ K++DF +T A G+ A E L + ++S+
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 194
Query: 608 VYSFGTILFEMIT-GRISY-SIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEEL 665
V++FG +L+E+ T G Y I+ + + + E+P E E++
Sbjct: 195 VWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERP-------------EGCPEKV 241
Query: 666 LVVIKNCVHPDPKQRPSMRGI 686
+++ C +P RPS I
Sbjct: 242 YELMRACWQWNPSDRPSFAEI 262
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 119/261 (45%), Gaps = 34/261 (13%)
Query: 438 GTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYC 497
G G VY+G + +VK+ + + +E +F K+ + ++ H N V L+G C
Sbjct: 26 GQYGEVYEGVWKK----YSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVC 80
Query: 498 EEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAH 557
+ PF ++ E+ G+L ++L + ++ + L +A ++ +E++ + H
Sbjct: 81 TREPPF--YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN--FIH 136
Query: 558 RNLQSSSIYLTEDYAAKISDFSF----WNNTTAAKTGS------AAMELLETSAVDLESN 607
R+L + + + E++ K++DF +T A G+ A E L + ++S+
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSD 196
Query: 608 VYSFGTILFEMIT-GRISY-SIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEEL 665
V++FG +L+E+ T G Y I+ + + + E+P E E++
Sbjct: 197 VWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERP-------------EGCPEKV 243
Query: 666 LVVIKNCVHPDPKQRPSMRGI 686
+++ C +P RPS I
Sbjct: 244 YELMRACWQWNPSDRPSFAEI 264
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 119/261 (45%), Gaps = 34/261 (13%)
Query: 438 GTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYC 497
G G VY+G + +VK+ + + +E +F K+ + ++ H N V L+G C
Sbjct: 26 GQYGEVYEGVWKK----YSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVC 80
Query: 498 EEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAH 557
+ PF ++ E+ G+L ++L + ++ + L +A ++ +E++ + H
Sbjct: 81 TREPPF--YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN--FIH 136
Query: 558 RNLQSSSIYLTEDYAAKISDFSF----WNNTTAAKTGS------AAMELLETSAVDLESN 607
R+L + + + E++ K++DF +T A G+ A E L + ++S+
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 196
Query: 608 VYSFGTILFEMIT-GRISY-SIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEEL 665
V++FG +L+E+ T G Y I+ + + + E+P E E++
Sbjct: 197 VWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERP-------------EGCPEKV 243
Query: 666 LVVIKNCVHPDPKQRPSMRGI 686
+++ C +P RPS I
Sbjct: 244 YELMRACWQWNPSDRPSFAEI 264
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 115/291 (39%), Gaps = 50/291 (17%)
Query: 435 FSDGTVGTVY----KGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNF 490
G+ G VY KG + E V +V A + +E F + + + N +
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE--FLNEASVMKEFNCHHV 77
Query: 491 VNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLD------------WAMRLRIA 538
V L+G + +P +++ E G L +L E + M IA
Sbjct: 78 VRLLGVVSQGQP--TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 135
Query: 539 MGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN---TTAAKTGSAAM- 594
GMAY + HR+L + + + ED+ KI DF + T + G +
Sbjct: 136 DGMAYLNAN------KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLL 189
Query: 595 -------ELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLK 647
E L+ S+V+SFG +L+E+ T L + L EQ L+
Sbjct: 190 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT-----------LAEQPYQGLSNEQVLR 238
Query: 648 DIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEP 698
+++ L +N + L +++ C +PK RPS I + +KE MEP
Sbjct: 239 FVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE--EMEP 287
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 115/291 (39%), Gaps = 50/291 (17%)
Query: 435 FSDGTVGTVY----KGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNF 490
G+ G VY KG + E V +V A + +E F + + + N +
Sbjct: 55 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE--FLNEASVMKEFNCHHV 112
Query: 491 VNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLD------------WAMRLRIA 538
V L+G + +P +++ E G L +L E + M IA
Sbjct: 113 VRLLGVVSQGQP--TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 170
Query: 539 MGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN---TTAAKTGSAAM- 594
GMAY + HR+L + + + ED+ KI DF + T + G +
Sbjct: 171 DGMAYLNAN------KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLL 224
Query: 595 -------ELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLK 647
E L+ S+V+SFG +L+E+ T L + L EQ L+
Sbjct: 225 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT-----------LAEQPYQGLSNEQVLR 273
Query: 648 DIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEP 698
+++ L +N + L +++ C +PK RPS I + +KE MEP
Sbjct: 274 FVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE--EMEP 322
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 119/261 (45%), Gaps = 34/261 (13%)
Query: 438 GTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYC 497
G G VY+G + +VK+ + + +E +F K+ + ++ H N V L+G C
Sbjct: 26 GQYGEVYEGVWKK----YSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVC 80
Query: 498 EEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAH 557
+ PF ++ E+ G+L ++L + ++ + L +A ++ +E++ + H
Sbjct: 81 TREPPF--YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN--FIH 136
Query: 558 RNLQSSSIYLTEDYAAKISDFSF----WNNTTAAKTGS------AAMELLETSAVDLESN 607
R+L + + + E++ K++DF +T A G+ A E L + ++S+
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 196
Query: 608 VYSFGTILFEMIT-GRISY-SIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEEL 665
V++FG +L+E+ T G Y I+ + + + E+P E E++
Sbjct: 197 VWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERP-------------EGCPEKV 243
Query: 666 LVVIKNCVHPDPKQRPSMRGI 686
+++ C +P RPS I
Sbjct: 244 YELMRACWQWNPSDRPSFAEI 264
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 115/291 (39%), Gaps = 50/291 (17%)
Query: 435 FSDGTVGTVY----KGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNF 490
G+ G VY KG + E V +V A + +E F + + + N +
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE--FLNEASVMKEFNCHHV 84
Query: 491 VNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLD------------WAMRLRIA 538
V L+G + +P +++ E G L +L E + M IA
Sbjct: 85 VRLLGVVSQGQP--TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 142
Query: 539 MGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN---TTAAKTGSAAM- 594
GMAY + HR+L + + + ED+ KI DF + T + G +
Sbjct: 143 DGMAYLNAN------KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLL 196
Query: 595 -------ELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLK 647
E L+ S+V+SFG +L+E+ T L + L EQ L+
Sbjct: 197 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT-----------LAEQPYQGLSNEQVLR 245
Query: 648 DIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEP 698
+++ L +N + L +++ C +PK RPS I + +KE MEP
Sbjct: 246 FVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE--EMEP 294
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 115/291 (39%), Gaps = 50/291 (17%)
Query: 435 FSDGTVGTVY----KGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNF 490
G+ G VY KG + E V +V A + +E F + + + N +
Sbjct: 24 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE--FLNEASVMKEFNCHHV 81
Query: 491 VNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLD------------WAMRLRIA 538
V L+G + +P +++ E G L +L E + M IA
Sbjct: 82 VRLLGVVSQGQP--TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 139
Query: 539 MGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN---TTAAKTGSAAM- 594
GMAY + HR+L + + + ED+ KI DF + T + G +
Sbjct: 140 DGMAYLNAN------KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLL 193
Query: 595 -------ELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLK 647
E L+ S+V+SFG +L+E+ T L + L EQ L+
Sbjct: 194 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT-----------LAEQPYQGLSNEQVLR 242
Query: 648 DIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEP 698
+++ L +N + L +++ C +PK RPS I + +KE MEP
Sbjct: 243 FVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE--EMEP 291
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 118/261 (45%), Gaps = 34/261 (13%)
Query: 438 GTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYC 497
G G VY+G + +VK+ + + +E +F K+ + ++ H N V L+G C
Sbjct: 22 GQYGEVYEGVWKK----YSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVC 76
Query: 498 EEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAH 557
+ PF ++ E+ G+L ++L + + + L +A ++ +E++ + H
Sbjct: 77 TREPPF--YIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN--FIH 132
Query: 558 RNLQSSSIYLTEDYAAKISDFSF----WNNTTAAKTGS------AAMELLETSAVDLESN 607
R+L + + + E++ K++DF +T A G+ A E L + ++S+
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYNKFSIKSD 192
Query: 608 VYSFGTILFEMIT-GRISY-SIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEEL 665
V++FG +L+E+ T G Y I+ + + + E+P E E++
Sbjct: 193 VWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMERP-------------EGCPEKV 239
Query: 666 LVVIKNCVHPDPKQRPSMRGI 686
+++ C +P RPS I
Sbjct: 240 YELMRACWQWNPSDRPSFAEI 260
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 84/178 (47%), Gaps = 24/178 (13%)
Query: 459 TSVKS-RADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSL 517
+VK+ +AD S ++++ID L + H++ + G CE+ + +V EY P GSL
Sbjct: 46 VAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSL 105
Query: 518 FEHL---HIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAK 574
++L I A+ L +A +I GMAY L H + HRNL + ++ L D K
Sbjct: 106 RDYLPRHSIGLAQLLLFAQ--QICEGMAY-LHSQHYI-----HRNLAARNVLLDNDRLVK 157
Query: 575 ISDFSFWNNTTAA-------KTGSA-----AMELLETSAVDLESNVYSFGTILFEMIT 620
I DF + G + A E L+ S+V+SFG L+E++T
Sbjct: 158 IGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 118/261 (45%), Gaps = 34/261 (13%)
Query: 438 GTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYC 497
G G VY+G + +VK+ + + +E +F K+ + ++ H N V L+G C
Sbjct: 29 GQYGEVYEGVWKK----YSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVC 83
Query: 498 EEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAH 557
+ PF ++ E+ G+L ++L + + + L +A ++ +E++ + H
Sbjct: 84 TREPPF--YIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN--FIH 139
Query: 558 RNLQSSSIYLTEDYAAKISDFSF----WNNTTAAKTGS------AAMELLETSAVDLESN 607
R+L + + + E++ K++DF +T A G+ A E L + ++S+
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 199
Query: 608 VYSFGTILFEMIT-GRISY-SIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEEL 665
V++FG +L+E+ T G Y I+ + + + E+P E E++
Sbjct: 200 VWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERP-------------EGCPEKV 246
Query: 666 LVVIKNCVHPDPKQRPSMRGI 686
+++ C +P RPS I
Sbjct: 247 YELMRACWQWNPSDRPSFAEI 267
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 84/178 (47%), Gaps = 24/178 (13%)
Query: 459 TSVKS-RADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSL 517
+VK+ +AD S ++++ID L + H++ + G CE+ + +V EY P GSL
Sbjct: 46 VAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSL 105
Query: 518 FEHL---HIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAK 574
++L I A+ L +A +I GMAY L H + HRNL + ++ L D K
Sbjct: 106 RDYLPRHSIGLAQLLLFAQ--QICEGMAY-LHAQHYI-----HRNLAARNVLLDNDRLVK 157
Query: 575 ISDFSFWNNTTAA-------KTGSA-----AMELLETSAVDLESNVYSFGTILFEMIT 620
I DF + G + A E L+ S+V+SFG L+E++T
Sbjct: 158 IGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 115/291 (39%), Gaps = 50/291 (17%)
Query: 435 FSDGTVGTVY----KGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNF 490
G+ G VY KG + E V +V A + +E F + + + N +
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE--FLNEASVMKEFNCHHV 83
Query: 491 VNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLD------------WAMRLRIA 538
V L+G + +P +++ E G L +L E + M IA
Sbjct: 84 VRLLGVVSQGQP--TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 141
Query: 539 MGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN---TTAAKTGSAAM- 594
GMAY + HR+L + + + ED+ KI DF + T + G +
Sbjct: 142 DGMAYLNAN------KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLL 195
Query: 595 -------ELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLK 647
E L+ S+V+SFG +L+E+ T L + L EQ L+
Sbjct: 196 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT-----------LAEQPYQGLSNEQVLR 244
Query: 648 DIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEP 698
+++ L +N + L +++ C +PK RPS I + +KE MEP
Sbjct: 245 FVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE--EMEP 293
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 115/291 (39%), Gaps = 50/291 (17%)
Query: 435 FSDGTVGTVY----KGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNF 490
G+ G VY KG + E V +V A + +E F + + + N +
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE--FLNEASVMKEFNCHHV 83
Query: 491 VNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLD------------WAMRLRIA 538
V L+G + +P +++ E G L +L E + M IA
Sbjct: 84 VRLLGVVSQGQP--TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 141
Query: 539 MGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN---TTAAKTGSAAM- 594
GMAY + HR+L + + + ED+ KI DF + T + G +
Sbjct: 142 DGMAYLNAN------KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLL 195
Query: 595 -------ELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLK 647
E L+ S+V+SFG +L+E+ T L + L EQ L+
Sbjct: 196 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT-----------LAEQPYQGLSNEQVLR 244
Query: 648 DIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEP 698
+++ L +N + L +++ C +PK RPS I + +KE MEP
Sbjct: 245 FVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE--EMEP 293
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 84/189 (44%), Gaps = 29/189 (15%)
Query: 449 SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 508
++G ++AV S +S + +L +K+I+ L + H+N V G C ED ++
Sbjct: 48 NTGEQVAVKSLKPESGGNHIADL----KKEIEILRNLYHENIVKYKGICTEDGGNGIKLI 103
Query: 509 FEYSPNGSLFEHL-----HIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSS 563
E+ P+GSL E+L I + L +A ++I GM Y + HR+L +
Sbjct: 104 MEFLPSGSLKEYLPKNKNKINLKQQLKYA--VQICKGMDYLGSRQY------VHRDLAAR 155
Query: 564 SIYLTEDYAAKISDFSFWNNTTAAKTGSA------------AMELLETSAVDLESNVYSF 611
++ + ++ KI DF K A E L S + S+V+SF
Sbjct: 156 NVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSF 215
Query: 612 GTILFEMIT 620
G L E++T
Sbjct: 216 GVTLHELLT 224
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 84/189 (44%), Gaps = 29/189 (15%)
Query: 449 SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 508
++G ++AV S +S + +L +K+I+ L + H+N V G C ED ++
Sbjct: 36 NTGEQVAVKSLKPESGGNHIADL----KKEIEILRNLYHENIVKYKGICTEDGGNGIKLI 91
Query: 509 FEYSPNGSLFEHL-----HIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSS 563
E+ P+GSL E+L I + L +A ++I GM Y + HR+L +
Sbjct: 92 MEFLPSGSLKEYLPKNKNKINLKQQLKYA--VQICKGMDYLGSRQY------VHRDLAAR 143
Query: 564 SIYLTEDYAAKISDFSFWNNTTAAKTGSA------------AMELLETSAVDLESNVYSF 611
++ + ++ KI DF K A E L S + S+V+SF
Sbjct: 144 NVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSF 203
Query: 612 GTILFEMIT 620
G L E++T
Sbjct: 204 GVTLHELLT 212
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 115/291 (39%), Gaps = 50/291 (17%)
Query: 435 FSDGTVGTVY----KGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNF 490
G+ G VY KG + E V +V A + +E F + + + N +
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE--FLNEASVMKEFNCHHV 90
Query: 491 VNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLD------------WAMRLRIA 538
V L+G + +P +++ E G L +L E + M IA
Sbjct: 91 VRLLGVVSQGQP--TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 148
Query: 539 MGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN---TTAAKTGSAAM- 594
GMAY + HR+L + + + ED+ KI DF + T + G +
Sbjct: 149 DGMAYLNAN------KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLL 202
Query: 595 -------ELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLK 647
E L+ S+V+SFG +L+E+ T L + L EQ L+
Sbjct: 203 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT-----------LAEQPYQGLSNEQVLR 251
Query: 648 DIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEP 698
+++ L +N + L +++ C +PK RPS I + +KE MEP
Sbjct: 252 FVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE--EMEP 300
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 117/291 (40%), Gaps = 50/291 (17%)
Query: 435 FSDGTVGTVY----KGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNF 490
G+ G VY KG + E V +V A + +E F + + + N +
Sbjct: 23 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE--FLNEASVMKEFNCHHV 80
Query: 491 VNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLH----------IQEAEHLDWAMRL--RIA 538
V L+G + +P +++ E G L +L + L +++ IA
Sbjct: 81 VRLLGVVSQGQP--TLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIA 138
Query: 539 MGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN---TTAAKTGSAAM- 594
GMAY + HR+L + + + ED+ KI DF + T + G +
Sbjct: 139 DGMAYLNAN------KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLL 192
Query: 595 -------ELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLK 647
E L+ S+V+SFG +L+E+ T L + L EQ L+
Sbjct: 193 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT-----------LAEQPYQGLSNEQVLR 241
Query: 648 DIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEP 698
+++ L +N + L +++ C +PK RPS I + +KE MEP
Sbjct: 242 FVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE--EMEP 290
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 114/269 (42%), Gaps = 34/269 (12%)
Query: 438 GTVGTVYKGTLSSGVEIAVTSTSVKS-RADWSKNLESQFRKKIDTLSKVNHKNFVNLIGY 496
G G V+ G L + T +VKS R +L+++F ++ L + +H N V LIG
Sbjct: 125 GNFGEVFSGRLRADN----TLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGV 180
Query: 497 CEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIA 556
C + +P +V E G L E L L++ A +E++ +
Sbjct: 181 CTQKQPI--YIVMELVQGGDFLTFLRT-EGARLRVKTLLQMVGDAAAGMEYLE--SKCCI 235
Query: 557 HRNLQSSSIYLTEDYAAKISDFSF----WNNTTAAKTGS-------AAMELLETSAVDLE 605
HR+L + + +TE KISDF + AA G A E L E
Sbjct: 236 HRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYSSE 295
Query: 606 SNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLK-SFQENVLEE 664
S+V+SFG +L+E ++S+ N ++ Q ++ V+ + E +
Sbjct: 296 SDVWSFGILLWE------TFSLGASPYPNLSN------QQTREFVEKGGRLPCPELCPDA 343
Query: 665 LLVVIKNCVHPDPKQRPSMRGIAAKLKEI 693
+ +++ C +P QRPS I +L+ I
Sbjct: 344 VFRLMEQCWAYEPGQRPSFSTIYQELQSI 372
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 117/291 (40%), Gaps = 50/291 (17%)
Query: 435 FSDGTVGTVY----KGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNF 490
G+ G VY KG + E V +V A + +E F + + + N +
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE--FLNEASVMKEFNCHHV 90
Query: 491 VNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLH----------IQEAEHLDWAMRL--RIA 538
V L+G + +P +++ E G L +L + L +++ IA
Sbjct: 91 VRLLGVVSQGQP--TLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIA 148
Query: 539 MGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN---TTAAKTGSAAM- 594
GMAY + HR+L + + + ED+ KI DF + T + G +
Sbjct: 149 DGMAYLNAN------KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLL 202
Query: 595 -------ELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLK 647
E L+ S+V+SFG +L+E+ T L + L EQ L+
Sbjct: 203 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT-----------LAEQPYQGLSNEQVLR 251
Query: 648 DIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEP 698
+++ L +N + L +++ C +PK RPS I + +KE MEP
Sbjct: 252 FVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE--EMEP 300
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 122/289 (42%), Gaps = 49/289 (16%)
Query: 429 SNIIGSFSDGTVGTVYKGTL----SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSK 484
+IG G G VY G + ++ A+ S S R + +E+ R+ + +
Sbjct: 26 DRVIGK---GHFGVVYHGEYIDQAQNRIQCAIKSLS---RITEMQQVEAFLREGL-LMRG 78
Query: 485 VNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLD---WAMRLRIAMGM 541
+NH N + LIG E +++ Y +G L + + + + L++A GM
Sbjct: 79 LNHPNVLALIGIMLPPEGLPHVLL-PYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGM 137
Query: 542 AYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSA--------- 592
Y E HR+L + + L E + K++DF + + S
Sbjct: 138 EYLAEQK------FVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLP 191
Query: 593 ----AMELLETSAVDLESNVYSFGTILFEMIT-GRISYS-IENGSLENWASEYLKGEQPL 646
A+E L+T +S+V+SFG +L+E++T G Y I+ L ++ ++ + QP
Sbjct: 192 VKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLPQP- 250
Query: 647 KDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITA 695
E + L V++ C DP RP+ R + ++++I +
Sbjct: 251 ------------EYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVS 287
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 84/178 (47%), Gaps = 24/178 (13%)
Query: 459 TSVKS-RADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSL 517
+VK+ +AD S ++++ID L + H++ + G CE+ + +V EY P GSL
Sbjct: 63 VAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSL 122
Query: 518 FEHL---HIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAK 574
++L I A+ L +A +I GMAY L H + HR+L + ++ L D K
Sbjct: 123 RDYLPRHSIGLAQLLLFAQ--QICEGMAY-LHAQHYI-----HRDLAARNVLLDNDRLVK 174
Query: 575 ISDFSFWNNTTAA-------KTGSA-----AMELLETSAVDLESNVYSFGTILFEMIT 620
I DF + G + A E L+ S+V+SFG L+E++T
Sbjct: 175 IGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 111/268 (41%), Gaps = 32/268 (11%)
Query: 438 GTVGTVYKGTLSSGVEIAVTSTSVKS-RADWSKNLESQFRKKIDTLSKVNHKNFVNLIGY 496
G G V+ G L + T +VKS R +L+++F ++ L + +H N V LIG
Sbjct: 125 GNFGEVFSGRLRADN----TLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGV 180
Query: 497 CEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIA 556
C + +P +V E G L E L L++ A +E++ +
Sbjct: 181 CTQKQPI--YIVMELVQGGDFLTFLRT-EGARLRVKTLLQMVGDAAAGMEYLE--SKCCI 235
Query: 557 HRNLQSSSIYLTEDYAAKISDFSF----WNNTTAAKTGS-------AAMELLETSAVDLE 605
HR+L + + +TE KISDF + AA G A E L E
Sbjct: 236 HRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSE 295
Query: 606 SNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEEL 665
S+V+SFG +L+E ++S+ N L +Q + + E + +
Sbjct: 296 SDVWSFGILLWE------TFSLGASPYPN-----LSNQQTREFVEKGGRLPCPELCPDAV 344
Query: 666 LVVIKNCVHPDPKQRPSMRGIAAKLKEI 693
+++ C +P QRPS I +L+ I
Sbjct: 345 FRLMEQCWAYEPGQRPSFSTIYQELQSI 372
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/298 (21%), Positives = 127/298 (42%), Gaps = 52/298 (17%)
Query: 412 GVPKLKRSELEAACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNL 471
G +LKR E+ ++ G G V G ++AV S +
Sbjct: 1 GHMELKREEI--------TLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMS------ 46
Query: 472 ESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLH-----IQEA 526
E +F ++ T+ K++H V G C ++ P +V EY NG L +L ++ +
Sbjct: 47 EDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPI--YIVTEYISNGCLLNYLRSHGKGLEPS 104
Query: 527 EHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF----WN 582
+ L+ M + GMA+ H HR+L + + + D K+SDF +
Sbjct: 105 QLLE--MCYDVCEGMAFLESHQ------FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLD 156
Query: 583 NTTAAKTGS------AAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENW 635
+ + G+ +A E+ +S+V++FG +++E+ + G++ Y + S
Sbjct: 157 DQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNS---- 212
Query: 636 ASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 693
LK Q + + P L S + + ++ +C H P++RP+ + + + ++ +
Sbjct: 213 -EVVLKVSQGHR-LYRPHLAS------DTIYQIMYSCWHELPEKRPTFQQLLSSIEPL 262
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 101/239 (42%), Gaps = 27/239 (11%)
Query: 475 FRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMR 534
F ++I+ L + H N V G C ++ EY P GSL ++L AE +D
Sbjct: 61 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAH-AERIDHIKL 119
Query: 535 LRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSA-- 592
L+ + +E++ T HR+L + +I + + KI DF K
Sbjct: 120 LQYTSQICKGMEYLG--TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK 177
Query: 593 ----------AMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKG 642
A E L S + S+V+SFG +L+E+ T Y ++ S +
Sbjct: 178 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT----YIEKSKSPPAEFMRMIGN 233
Query: 643 EQPLKDIVDPTLKSFQEN--------VLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 693
++ + IV ++ + N +E+ +++ C + + QRPS R +A ++ +I
Sbjct: 234 DKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 292
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 115/273 (42%), Gaps = 34/273 (12%)
Query: 424 ACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLS 483
A EDF I G G VY + I K++ + +E Q R++++ S
Sbjct: 6 ALEDF-EIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLE-KAGVEHQLRREVEIQS 63
Query: 484 KVNHKNFVNLIGYCEEDEPFTRM-MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMA 542
+ H N + L GY + TR+ ++ EY+P G+++ L Q+ D +A
Sbjct: 64 HLRHPNILRLYGYFHDS---TRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELA 118
Query: 543 YCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSAAM-------- 594
L + H + + HR+++ ++ L KI+DF + + A + AA+
Sbjct: 119 NALSYCH--SKKVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRAALCGTLDYLP 174
Query: 595 -ELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPT 653
E++E D + +++S G + +E + G+ + A+ Y Q +
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE---------ANTY----QDTYKRISRV 221
Query: 654 LKSFQENVLEELLVVIKNCVHPDPKQRPSMRGI 686
+F + V E +I + +P QRP +R +
Sbjct: 222 EFTFPDFVTEGARDLISRLLKHNPSQRPMLREV 254
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 103/239 (43%), Gaps = 27/239 (11%)
Query: 475 FRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMR 534
F ++I+ L + H N V G C ++ EY P GSL ++L + E +D
Sbjct: 59 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKL 117
Query: 535 LRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKT----- 589
L+ + +E++ T HRNL + +I + + KI DF K
Sbjct: 118 LQYTSQICKGMEYLG--TKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVK 175
Query: 590 --GSA-----AMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKG 642
G + A E L S + S+V+SFG +L+E+ T Y ++ S +
Sbjct: 176 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT----YIEKSKSPPAEFMRMIGN 231
Query: 643 EQPLKDIVDPTLKSFQEN--------VLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 693
++ + IV ++ + N +E+ +++ C + + QRPS R +A ++ +I
Sbjct: 232 DKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 290
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 99/240 (41%), Gaps = 50/240 (20%)
Query: 415 KLKRSELEAACEDFSNIIGSFSDGTVGTVYKGTL---SSGVEI-AVTSTSVKSRADWSKN 470
KLK L A + + G VYKG L + G + AV ++K +A+
Sbjct: 19 KLKEISLSAV-----RFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAE--GP 71
Query: 471 LESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLD 530
L +FR + +++ H N V L+G +D+P + M+F Y +G L E L + + H D
Sbjct: 72 LREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLS--MIFSYCSHGDLHEFL-VMRSPHSD 128
Query: 531 WA-------------------MRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDY 571
+ +IA GM Y H + H++L + ++ + +
Sbjct: 129 VGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH------VVHKDLATRNVLVYDKL 182
Query: 572 AAKISDFSFWNNTTAAKTGS-----------AAMELLETSAVDLESNVYSFGTILFEMIT 620
KISD + AA A E + ++S+++S+G +L+E+ +
Sbjct: 183 NVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 116/273 (42%), Gaps = 34/273 (12%)
Query: 424 ACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLS 483
A EDF I G G VY I K++ + +E Q R++++ S
Sbjct: 9 ALEDF-EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGVEHQLRREVEIQS 66
Query: 484 KVNHKNFVNLIGYCEEDEPFTRM-MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMA 542
+ H N + L GY + TR+ ++ EY+P G+++ L Q+ D +A
Sbjct: 67 HLRHPNILRLYGYFHDA---TRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELA 121
Query: 543 YCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSAAM-------- 594
L + H + + HR+++ ++ L KI+DF + + A + AA+
Sbjct: 122 NALSYCH--SKRVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRAALCGTLDYLP 177
Query: 595 -ELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPT 653
E++E D + +++S G + +E + G+ + A+ Y ++ K I
Sbjct: 178 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE---------ANTY---QETYKRISRVE 225
Query: 654 LKSFQENVLEELLVVIKNCVHPDPKQRPSMRGI 686
+F + V E +I + +P QRP +R +
Sbjct: 226 F-TFPDFVTEGARDLISRLLKHNPSQRPMLREV 257
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 116/273 (42%), Gaps = 34/273 (12%)
Query: 424 ACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLS 483
A EDF I G G VY I K++ + +E Q R++++ S
Sbjct: 6 ALEDF-EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGVEHQLRREVEIQS 63
Query: 484 KVNHKNFVNLIGYCEEDEPFTRM-MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMA 542
+ H N + L GY + TR+ ++ EY+P G+++ L Q+ D +A
Sbjct: 64 HLRHPNILRLYGYFHDA---TRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELA 118
Query: 543 YCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSAAM-------- 594
L + H + + HR+++ ++ L KI+DF + + A + AA+
Sbjct: 119 NALSYCH--SKRVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRAALCGTLDYLP 174
Query: 595 -ELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPT 653
E++E D + +++S G + +E + G+ + A+ Y ++ K I
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE---------ANTY---QETYKRISRVE 222
Query: 654 LKSFQENVLEELLVVIKNCVHPDPKQRPSMRGI 686
+F + V E +I + +P QRP +R +
Sbjct: 223 F-TFPDFVTEGARDLISRLLKHNPSQRPMLREV 254
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 101/239 (42%), Gaps = 27/239 (11%)
Query: 475 FRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMR 534
F ++I+ L + H N V G C ++ EY P GSL ++L + E +D
Sbjct: 65 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKL 123
Query: 535 LRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSA-- 592
L+ + +E++ T HR+L + +I + + KI DF K
Sbjct: 124 LQYTSQICKGMEYLG--TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK 181
Query: 593 ----------AMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKG 642
A E L S + S+V+SFG +L+E+ T Y ++ S +
Sbjct: 182 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT----YIEKSKSPPAEFMRMIGN 237
Query: 643 EQPLKDIVDPTLKSFQEN--------VLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 693
++ + IV ++ + N +E+ +++ C + + QRPS R +A ++ +I
Sbjct: 238 DKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 296
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 101/239 (42%), Gaps = 27/239 (11%)
Query: 475 FRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMR 534
F ++I+ L + H N V G C ++ EY P GSL ++L + E +D
Sbjct: 76 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKL 134
Query: 535 LRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSA-- 592
L+ + +E++ T HR+L + +I + + KI DF K
Sbjct: 135 LQYTSQICKGMEYLG--TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK 192
Query: 593 ----------AMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKG 642
A E L S + S+V+SFG +L+E+ T Y ++ S +
Sbjct: 193 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT----YIEKSKSPPAEFMRMIGN 248
Query: 643 EQPLKDIVDPTLKSFQEN--------VLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 693
++ + IV ++ + N +E+ +++ C + + QRPS R +A ++ +I
Sbjct: 249 DKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 307
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 99/240 (41%), Gaps = 50/240 (20%)
Query: 415 KLKRSELEAACEDFSNIIGSFSDGTVGTVYKGTL---SSGVEI-AVTSTSVKSRADWSKN 470
KLK L A + + G VYKG L + G + AV ++K +A+
Sbjct: 2 KLKEISLSAV-----RFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAE--GP 54
Query: 471 LESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLD 530
L +FR + +++ H N V L+G +D+P + M+F Y +G L E L + + H D
Sbjct: 55 LREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLS--MIFSYCSHGDLHEFL-VMRSPHSD 111
Query: 531 WA-------------------MRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDY 571
+ +IA GM Y H + H++L + ++ + +
Sbjct: 112 VGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH------VVHKDLATRNVLVYDKL 165
Query: 572 AAKISDFSFWNNTTAAKTGS-----------AAMELLETSAVDLESNVYSFGTILFEMIT 620
KISD + AA A E + ++S+++S+G +L+E+ +
Sbjct: 166 NVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 101/239 (42%), Gaps = 27/239 (11%)
Query: 475 FRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMR 534
F ++I+ L + H N V G C ++ EY P GSL ++L + E +D
Sbjct: 58 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKL 116
Query: 535 LRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSA-- 592
L+ + +E++ T HR+L + +I + + KI DF K
Sbjct: 117 LQYTSQICKGMEYLG--TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK 174
Query: 593 ----------AMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKG 642
A E L S + S+V+SFG +L+E+ T Y ++ S +
Sbjct: 175 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT----YIEKSKSPPAEFMRMIGN 230
Query: 643 EQPLKDIVDPTLKSFQEN--------VLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 693
++ + IV ++ + N +E+ +++ C + + QRPS R +A ++ +I
Sbjct: 231 DKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 289
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 117/269 (43%), Gaps = 39/269 (14%)
Query: 438 GTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYC 497
G G V+ T + ++AV K+ S ++E+ F + + + + H V L
Sbjct: 193 GQFGEVWMATYNKHTKVAV-----KTMKPGSMSVEA-FLAEANVMKTLQHDKLVKLHAVV 246
Query: 498 EEDEPFTRMMVFEYSPNGSLFEHLHIQEAEH------LDWAMRLRIAMGMAYCLEHMHQL 551
+ EP ++ E+ GSL + L E +D++ + IA GMA+ + +
Sbjct: 247 TK-EPI--YIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQ--IAEGMAFIEQRNY-- 299
Query: 552 TPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSAAMELLETSAVDLESNVYSF 611
HR+L++++I ++ KI+DF A E + + ++S+V+SF
Sbjct: 300 ----IHRDLRAANILVSASLVCKIADFGLARVGAKFPIKWTAPEAINFGSFTIKSDVWSF 355
Query: 612 GTILFEMIT-GRISY-SIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVI 669
G +L E++T GRI Y + N + + +P EN EEL ++
Sbjct: 356 GILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRP-------------ENCPEELYNIM 402
Query: 670 KNCVHPDPKQRPSMRGIAAKLKEI-TAME 697
C P++RP+ I + L + TA E
Sbjct: 403 MRCWKNRPEERPTFEYIQSVLDDFYTATE 431
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 101/239 (42%), Gaps = 27/239 (11%)
Query: 475 FRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMR 534
F ++I+ L + H N V G C ++ EY P GSL ++L + E +D
Sbjct: 76 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKL 134
Query: 535 LRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSA-- 592
L+ + +E++ T HR+L + +I + + KI DF K
Sbjct: 135 LQYTSQICKGMEYLG--TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK 192
Query: 593 ----------AMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKG 642
A E L S + S+V+SFG +L+E+ T Y ++ S +
Sbjct: 193 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT----YIEKSKSPPAEFMRMIGN 248
Query: 643 EQPLKDIVDPTLKSFQEN--------VLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 693
++ + IV ++ + N +E+ +++ C + + QRPS R +A ++ +I
Sbjct: 249 DKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 307
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 101/239 (42%), Gaps = 27/239 (11%)
Query: 475 FRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMR 534
F ++I+ L + H N V G C ++ EY P GSL ++L + E +D
Sbjct: 61 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKL 119
Query: 535 LRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSA-- 592
L+ + +E++ T HR+L + +I + + KI DF K
Sbjct: 120 LQYTSQICKGMEYLG--TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK 177
Query: 593 ----------AMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKG 642
A E L S + S+V+SFG +L+E+ T Y ++ S +
Sbjct: 178 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT----YIEKSKSPPAEFMRMIGN 233
Query: 643 EQPLKDIVDPTLKSFQEN--------VLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 693
++ + IV ++ + N +E+ +++ C + + QRPS R +A ++ +I
Sbjct: 234 DKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 292
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 101/239 (42%), Gaps = 27/239 (11%)
Query: 475 FRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMR 534
F ++I+ L + H N V G C ++ EY P GSL ++L + E +D
Sbjct: 63 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKL 121
Query: 535 LRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSA-- 592
L+ + +E++ T HR+L + +I + + KI DF K
Sbjct: 122 LQYTSQICKGMEYLG--TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK 179
Query: 593 ----------AMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKG 642
A E L S + S+V+SFG +L+E+ T Y ++ S +
Sbjct: 180 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT----YIEKSKSPPAEFMRMIGN 235
Query: 643 EQPLKDIVDPTLKSFQEN--------VLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 693
++ + IV ++ + N +E+ +++ C + + QRPS R +A ++ +I
Sbjct: 236 DKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 294
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 101/239 (42%), Gaps = 27/239 (11%)
Query: 475 FRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMR 534
F ++I+ L + H N V G C ++ EY P GSL ++L + E +D
Sbjct: 62 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKL 120
Query: 535 LRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSA-- 592
L+ + +E++ T HR+L + +I + + KI DF K
Sbjct: 121 LQYTSQICKGMEYLG--TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK 178
Query: 593 ----------AMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKG 642
A E L S + S+V+SFG +L+E+ T Y ++ S +
Sbjct: 179 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT----YIEKSKSPPAEFMRMIGN 234
Query: 643 EQPLKDIVDPTLKSFQEN--------VLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 693
++ + IV ++ + N +E+ +++ C + + QRPS R +A ++ +I
Sbjct: 235 DKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 293
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 101/239 (42%), Gaps = 27/239 (11%)
Query: 475 FRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMR 534
F ++I+ L + H N V G C ++ EY P GSL ++L + E +D
Sbjct: 56 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKL 114
Query: 535 LRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSA-- 592
L+ + +E++ T HR+L + +I + + KI DF K
Sbjct: 115 LQYTSQICKGMEYLG--TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK 172
Query: 593 ----------AMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKG 642
A E L S + S+V+SFG +L+E+ T Y ++ S +
Sbjct: 173 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT----YIEKSKSPPAEFMRMIGN 228
Query: 643 EQPLKDIVDPTLKSFQEN--------VLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 693
++ + IV ++ + N +E+ +++ C + + QRPS R +A ++ +I
Sbjct: 229 DKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 287
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 124/304 (40%), Gaps = 63/304 (20%)
Query: 416 LKRSELEAACEDFSNIIGSFSDGTVGTVYKG-------TLSSGVEIAVTSTSVKSRADWS 468
LK +EL+ ++GS G GTVYKG T+ V I + + + +A+
Sbjct: 35 LKETELKRV-----KVLGS---GAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKAN-- 84
Query: 469 KNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLH-----I 523
+F + ++ ++H + V L+G C T +V + P+G L E++H I
Sbjct: 85 ----VEFMDEALIMASMDHPHLVRLLGVCLSP---TIQLVTQLMPHGCLLEYVHEHKDNI 137
Query: 524 QEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWN- 582
L+W ++IA GM Y E + HR+L + ++ + KI+DF
Sbjct: 138 GSQLLLNWC--VQIAKGMMYLEERR------LVHRDLAARNVLVKSPNHVKITDFGLARL 189
Query: 583 --------NTTAAKTGSA--AMELLETSAVDLESNVYSFGTILFEMIT--GRISYSIENG 630
N K A+E + +S+V+S+G ++E++T G+ I
Sbjct: 190 LEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTR 249
Query: 631 SLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKL 690
+ + + + QP +D + +V+ C D RP + +AA+
Sbjct: 250 EIPDLLEKGERLPQPPICTID-------------VYMVMVKCWMIDADSRPKFKELAAEF 296
Query: 691 KEIT 694
+
Sbjct: 297 SRMA 300
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 101/239 (42%), Gaps = 27/239 (11%)
Query: 475 FRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMR 534
F ++I+ L + H N V G C ++ EY P GSL ++L + E +D
Sbjct: 58 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKL 116
Query: 535 LRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSA-- 592
L+ + +E++ T HR+L + +I + + KI DF K
Sbjct: 117 LQYTSQICKGMEYLG--TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK 174
Query: 593 ----------AMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKG 642
A E L S + S+V+SFG +L+E+ T Y ++ S +
Sbjct: 175 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT----YIEKSKSPPAEFMRMIGN 230
Query: 643 EQPLKDIVDPTLKSFQEN--------VLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 693
++ + IV ++ + N +E+ +++ C + + QRPS R +A ++ +I
Sbjct: 231 DKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 289
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 101/239 (42%), Gaps = 27/239 (11%)
Query: 475 FRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMR 534
F ++I+ L + H N V G C ++ EY P GSL ++L + E +D
Sbjct: 89 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKL 147
Query: 535 LRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSA-- 592
L+ + +E++ T HR+L + +I + + KI DF K
Sbjct: 148 LQYTSQICKGMEYLG--TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK 205
Query: 593 ----------AMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKG 642
A E L S + S+V+SFG +L+E+ T Y ++ S +
Sbjct: 206 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT----YIEKSKSPPAEFMRMIGN 261
Query: 643 EQPLKDIVDPTLKSFQEN--------VLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 693
++ + IV ++ + N +E+ +++ C + + QRPS R +A ++ +I
Sbjct: 262 DKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 320
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/295 (21%), Positives = 124/295 (42%), Gaps = 45/295 (15%)
Query: 431 IIGS-FSDGTVGTVYKGTLS--SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNH 487
I+G +G G+V +G L G + V ++K + +E +F + + +H
Sbjct: 37 ILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIE-EFLSEAACMKDFSH 95
Query: 488 KNFVNLIGYCEE------DEPFTRMMVFEYSPNGSLFEHLHIQEAE----HLDWAMRLRI 537
N + L+G C E +P M++ + G L +L E H+ L+
Sbjct: 96 PNVIRLLGVCIEMSSQGIPKP---MVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKF 152
Query: 538 AMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFS---------FWNNTTAAK 588
+ +A +E++ HR+L + + L +D ++DF ++ AK
Sbjct: 153 MVDIALGMEYLSNRN--FLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAK 210
Query: 589 TGSA--AMELLETSAVDLESNVYSFGTILFEMIT-GRISY-SIENGSLENWASEYLKGEQ 644
A+E L +S+V++FG ++E+ T G Y ++N + ++ + +Q
Sbjct: 211 MPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHRLKQ 270
Query: 645 PLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPD 699
P E+ L+EL ++ +C DP RP+ + +L+++ PD
Sbjct: 271 P-------------EDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESLPD 312
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 101/239 (42%), Gaps = 27/239 (11%)
Query: 475 FRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMR 534
F ++I+ L + H N V G C ++ EY P GSL ++L + E +D
Sbjct: 64 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKL 122
Query: 535 LRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSA-- 592
L+ + +E++ T HR+L + +I + + KI DF K
Sbjct: 123 LQYTSQICKGMEYLG--TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK 180
Query: 593 ----------AMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKG 642
A E L S + S+V+SFG +L+E+ T Y ++ S +
Sbjct: 181 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT----YIEKSKSPPAEFMRMIGN 236
Query: 643 EQPLKDIVDPTLKSFQEN--------VLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 693
++ + IV ++ + N +E+ +++ C + + QRPS R +A ++ +I
Sbjct: 237 DKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 295
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 120/273 (43%), Gaps = 48/273 (17%)
Query: 438 GTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYC 497
G G V+ T + ++AV K+ S ++E+ F + + + + H V L
Sbjct: 26 GQFGEVWMATYNKHTKVAV-----KTMKPGSMSVEA-FLAEANVMKTLQHDKLVKLHAVV 79
Query: 498 EEDEPFTRMMVFEYSPNGSLFEHLHIQEAEH------LDWAMRLRIAMGMAYCLEHMHQL 551
++ + ++ E+ GSL + L E +D++ + IA GMA+ + +
Sbjct: 80 TKEPIY---IITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQ--IAEGMAFIEQRNY-- 132
Query: 552 TPPIAHRNLQSSSIYLTEDYAAKISDFSFW----NNTTAAKTGS------AAMELLETSA 601
HR+L++++I ++ KI+DF +N A+ G+ A E + +
Sbjct: 133 ----IHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGS 188
Query: 602 VDLESNVYSFGTILFEMIT-GRISY-SIENGSLENWASEYLKGEQPLKDIVDPTLKSFQE 659
++S+V+SFG +L E++T GRI Y + N + + +P E
Sbjct: 189 FTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRP-------------E 235
Query: 660 NVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKE 692
N EEL ++ C P++RP+ I + L +
Sbjct: 236 NCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 268
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 123/279 (44%), Gaps = 49/279 (17%)
Query: 438 GTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYC 497
G G V+ T + ++AV K+ S ++E+ F + + + + H V L
Sbjct: 199 GQFGEVWMATYNKHTKVAV-----KTMKPGSMSVEA-FLAEANVMKTLQHDKLVKLHAVV 252
Query: 498 EEDEPFTRMMVFEYSPNGSLFEHLHIQEAEH------LDWAMRLRIAMGMAYCLEHMHQL 551
+ EP ++ E+ GSL + L E +D++ + IA GMA+ + +
Sbjct: 253 TK-EPI--YIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQ--IAEGMAFIEQRNY-- 305
Query: 552 TPPIAHRNLQSSSIYLTEDYAAKISDFSFW----NNTTAAKTGS------AAMELLETSA 601
HR+L++++I ++ KI+DF +N A+ G+ A E + +
Sbjct: 306 ----IHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGS 361
Query: 602 VDLESNVYSFGTILFEMIT-GRISY-SIENGSLENWASEYLKGEQPLKDIVDPTLKSFQE 659
++S+V+SFG +L E++T GRI Y + N + + +P E
Sbjct: 362 FTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRP-------------E 408
Query: 660 NVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI-TAME 697
N EEL ++ C P++RP+ I + L + TA E
Sbjct: 409 NCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTATE 447
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 103/239 (43%), Gaps = 27/239 (11%)
Query: 475 FRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMR 534
F ++I+ L + H N V G C ++ EY P GSL ++L + E +D
Sbjct: 58 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKL 116
Query: 535 LRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKT----- 589
L+ + +E++ T HR+L + +I + + KI DF K
Sbjct: 117 LQYTSQICKGMEYLG--TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVK 174
Query: 590 --GSA-----AMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKG 642
G + A E L S + S+V+SFG +L+E+ T Y ++ S +
Sbjct: 175 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT----YIEKSKSPPAEFMRMIGN 230
Query: 643 EQPLKDIVDPTLKSFQEN--------VLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 693
++ + IV ++ + N +E+ +++ C + + QRPS R +A ++ +I
Sbjct: 231 DKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 289
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 101/239 (42%), Gaps = 27/239 (11%)
Query: 475 FRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMR 534
F ++I+ L + H N V G C ++ EY P GSL ++L + E +D
Sbjct: 57 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKL 115
Query: 535 LRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSA-- 592
L+ + +E++ T HR+L + +I + + KI DF K
Sbjct: 116 LQYTSQICKGMEYLG--TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK 173
Query: 593 ----------AMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKG 642
A E L S + S+V+SFG +L+E+ T Y ++ S +
Sbjct: 174 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT----YIEKSKSPPAEFMRMIGN 229
Query: 643 EQPLKDIVDPTLKSFQEN--------VLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 693
++ + IV ++ + N +E+ +++ C + + QRPS R +A ++ +I
Sbjct: 230 DKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 288
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 115/271 (42%), Gaps = 30/271 (11%)
Query: 424 ACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLS 483
A EDF I G G VY I K++ + +E Q R++++ S
Sbjct: 11 ALEDF-EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGVEHQLRREVEIQS 68
Query: 484 KVNHKNFVNLIGYCEEDEPFTRM-MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMA 542
+ H N + L GY + TR+ ++ EY+P G +++ L Q+ D +A
Sbjct: 69 HLRHPNILRLYGYFHDA---TRVYLILEYAPRGEVYKEL--QKLSKFDEQRTATYITELA 123
Query: 543 YCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSAA-------ME 595
L + H + + HR+++ ++ L KI+DF + + +++ + E
Sbjct: 124 NALSYCH--SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPE 181
Query: 596 LLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLK 655
++E D + +++S G + +E + G+ + A+ Y ++ K I
Sbjct: 182 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE---------ANTY---QETYKRISRVEF- 228
Query: 656 SFQENVLEELLVVIKNCVHPDPKQRPSMRGI 686
+F + V E +I + +P QRP +R +
Sbjct: 229 TFPDFVTEGARDLISRLLKHNPSQRPMLREV 259
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 124/304 (40%), Gaps = 63/304 (20%)
Query: 416 LKRSELEAACEDFSNIIGSFSDGTVGTVYKG-------TLSSGVEIAVTSTSVKSRADWS 468
LK +EL+ ++GS G GTVYKG T+ V I + + + +A+
Sbjct: 12 LKETELKRV-----KVLGS---GAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKAN-- 61
Query: 469 KNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLH-----I 523
+F + ++ ++H + V L+G C T +V + P+G L E++H I
Sbjct: 62 ----VEFMDEALIMASMDHPHLVRLLGVCLSP---TIQLVTQLMPHGCLLEYVHEHKDNI 114
Query: 524 QEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWN- 582
L+W ++IA GM Y E + HR+L + ++ + KI+DF
Sbjct: 115 GSQLLLNWC--VQIAKGMMYLEERR------LVHRDLAARNVLVKSPNHVKITDFGLARL 166
Query: 583 --------NTTAAKTGSA--AMELLETSAVDLESNVYSFGTILFEMIT--GRISYSIENG 630
N K A+E + +S+V+S+G ++E++T G+ I
Sbjct: 167 LEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTR 226
Query: 631 SLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKL 690
+ + + + QP +D + +V+ C D RP + +AA+
Sbjct: 227 EIPDLLEKGERLPQPPICTID-------------VYMVMVKCWMIDADSRPKFKELAAEF 273
Query: 691 KEIT 694
+
Sbjct: 274 SRMA 277
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 101/239 (42%), Gaps = 27/239 (11%)
Query: 475 FRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMR 534
F ++I+ L + H N V G C ++ E+ P GSL E+L + E +D
Sbjct: 61 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQ-KHKERIDHIKL 119
Query: 535 LRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSA-- 592
L+ + +E++ T HR+L + +I + + KI DF K
Sbjct: 120 LQYTSQICKGMEYLG--TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK 177
Query: 593 ----------AMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKG 642
A E L S + S+V+SFG +L+E+ T Y ++ S +
Sbjct: 178 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT----YIEKSKSPPAEFMRMIGN 233
Query: 643 EQPLKDIVDPTLKSFQEN--------VLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 693
++ + IV ++ + N +E+ +++ C + + QRPS R +A ++ +I
Sbjct: 234 DKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 292
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 117/271 (43%), Gaps = 30/271 (11%)
Query: 424 ACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLS 483
A EDF I G G VY I K++ + +E Q R++++ S
Sbjct: 7 ALEDF-EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGVEHQLRREVEIQS 64
Query: 484 KVNHKNFVNLIGYCEEDEPFTRM-MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMA 542
+ H N + L GY + TR+ ++ EY+P G+++ L Q+ D +A
Sbjct: 65 HLRHPNILRLYGYFHDA---TRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELA 119
Query: 543 YCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAK--TGSAAM-----E 595
L + H + + HR+++ ++ L KI+DF + + +++ T S + E
Sbjct: 120 NALSYCH--SKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLSGTLDYLPPE 177
Query: 596 LLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLK 655
++E D + +++S G + +E + G+ + A+ Y ++ K I
Sbjct: 178 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE---------ANTY---QETYKRISRVEF- 224
Query: 656 SFQENVLEELLVVIKNCVHPDPKQRPSMRGI 686
+F + V E +I + +P QRP +R +
Sbjct: 225 TFPDFVTEGARDLISRLLKHNPSQRPMLREV 255
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 118/276 (42%), Gaps = 30/276 (10%)
Query: 419 SELEAACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKK 478
S+ + A EDF I G G VY I K++ + +E Q R++
Sbjct: 5 SKRQWALEDF-EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGVEHQLRRE 62
Query: 479 IDTLSKVNHKNFVNLIGYCEEDEPFTRM-MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRI 537
++ S + H N + L GY + TR+ ++ EY+P G+++ L Q+ D
Sbjct: 63 VEIQSHLRHPNILRLYGYFHDA---TRVYLILEYAPLGTVYREL--QKLSKFDEQRTATY 117
Query: 538 AMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSAA---- 593
+A L + H + + HR+++ ++ L KI+DF + + +++ +
Sbjct: 118 ITELANALSYCH--SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLD 175
Query: 594 ---MELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIV 650
E++E D + +++S G + +E + G+ + A+ Y ++ K I
Sbjct: 176 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE---------ANTY---QETYKRIS 223
Query: 651 DPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGI 686
+F + V E +I + +P QRP +R +
Sbjct: 224 RVEF-TFPDFVTEGARDLISRLLKHNPSQRPMLREV 258
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 112/271 (41%), Gaps = 30/271 (11%)
Query: 424 ACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLS 483
A EDF I G G VY I K++ + +E Q R++++ S
Sbjct: 7 ALEDF-EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGVEHQLRREVEIQS 64
Query: 484 KVNHKNFVNLIGYCEEDEPFTRM-MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMA 542
+ H N + L GY + TR+ ++ EY+P G+++ L Q+ D +A
Sbjct: 65 HLRHPNILRLYGYFHDA---TRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELA 119
Query: 543 YCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF-------SFWNNTTAAKTGSAAME 595
L + H + + HR+++ ++ L KI+DF S +T E
Sbjct: 120 NALSYCH--SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDTLCGTLDYLPPE 177
Query: 596 LLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLK 655
++E D + +++S G + +E + G+ + A+ Y ++ K I
Sbjct: 178 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE---------ANTY---QETYKRISRVEF- 224
Query: 656 SFQENVLEELLVVIKNCVHPDPKQRPSMRGI 686
+F + V E +I + +P QRP +R +
Sbjct: 225 TFPDFVTEGARDLISRLLKHNPSQRPMLREV 255
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 114/271 (42%), Gaps = 30/271 (11%)
Query: 424 ACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLS 483
A EDF I G G VY I K++ + +E Q R++++ S
Sbjct: 11 ALEDF-EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGVEHQLRREVEIQS 68
Query: 484 KVNHKNFVNLIGYCEEDEPFTRM-MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMA 542
+ H N + L GY + TR+ ++ EY+P G +++ L Q+ D +A
Sbjct: 69 HLRHPNILRLYGYFHDA---TRVYLILEYAPRGEVYKEL--QKLSKFDEQRTATYITELA 123
Query: 543 YCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSAA-------ME 595
L + H + + HR+++ ++ L KI+DF + + +++ E
Sbjct: 124 NALSYCH--SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLXGTLDYLPPE 181
Query: 596 LLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLK 655
++E D + +++S G + +E + G+ + A+ Y ++ K I
Sbjct: 182 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE---------ANTY---QETYKRISRVEF- 228
Query: 656 SFQENVLEELLVVIKNCVHPDPKQRPSMRGI 686
+F + V E +I + +P QRP +R +
Sbjct: 229 TFPDFVTEGARDLISRLLKHNPSQRPMLREV 259
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 115/271 (42%), Gaps = 30/271 (11%)
Query: 424 ACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLS 483
A EDF I G G VY I K++ + +E Q R++++ S
Sbjct: 6 ALEDF-EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGVEHQLRREVEIQS 63
Query: 484 KVNHKNFVNLIGYCEEDEPFTRM-MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMA 542
+ H N + L GY + TR+ ++ EY+P G+++ L Q+ D +A
Sbjct: 64 HLRHPNILRLYGYFHDA---TRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELA 118
Query: 543 YCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSAA-------ME 595
L + H + + HR+++ ++ L KI+DF + + +++ + E
Sbjct: 119 NALSYCH--SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPE 176
Query: 596 LLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLK 655
++E D + +++S G + +E + G+ + A+ Y ++ K I
Sbjct: 177 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE---------ANTY---QETYKRISRVEF- 223
Query: 656 SFQENVLEELLVVIKNCVHPDPKQRPSMRGI 686
+F + V E +I + +P QRP +R +
Sbjct: 224 TFPDFVTEGARDLISRLLKHNPSQRPMLREV 254
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 66/153 (43%), Gaps = 20/153 (13%)
Query: 438 GTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYC 497
G G VYKG+L +AV S +R ++ K I + + H N I
Sbjct: 24 GRYGAVYKGSLDER-PVAVKVFSFANRQNFINE------KNIYRVPLMEHDNIARFIVGD 76
Query: 498 EE---DEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMH----- 549
E D ++V EY PNGSL ++L + + DW R+A + L ++H
Sbjct: 77 ERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS---DWVSSCRLAHSVTRGLAYLHTELPR 133
Query: 550 --QLTPPIAHRNLQSSSIYLTEDYAAKISDFSF 580
P I+HR+L S ++ + D ISDF
Sbjct: 134 GDHYKPAISHRDLNSRNVLVKNDGTCVISDFGL 166
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 115/271 (42%), Gaps = 30/271 (11%)
Query: 424 ACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLS 483
A EDF I G G VY I K++ + +E Q R++++ S
Sbjct: 5 ALEDF-EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGVEHQLRREVEIQS 62
Query: 484 KVNHKNFVNLIGYCEEDEPFTRM-MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMA 542
+ H N + L GY + TR+ ++ EY+P G+++ L Q+ D +A
Sbjct: 63 HLRHPNILRLYGYFHDA---TRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELA 117
Query: 543 YCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSAA-------ME 595
L + H + + HR+++ ++ L KI+DF + + +++ + E
Sbjct: 118 NALSYCH--SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPE 175
Query: 596 LLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLK 655
++E D + +++S G + +E + G+ + A+ Y ++ K I
Sbjct: 176 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE---------ANTY---QETYKRISRVEF- 222
Query: 656 SFQENVLEELLVVIKNCVHPDPKQRPSMRGI 686
+F + V E +I + +P QRP +R +
Sbjct: 223 TFPDFVTEGARDLISRLLKHNPSQRPMLREV 253
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 117/305 (38%), Gaps = 70/305 (22%)
Query: 434 SFSDGTVGTVYKGTL------SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNH 487
+ +G G V K T + +AV + ++L S+F + L +VNH
Sbjct: 30 TLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEF----NVLKQVNH 85
Query: 488 KNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLH-----------------IQEAEHLD 530
+ + L G C +D P +++ EY+ GSL L +H D
Sbjct: 86 PHVIKLYGACSQDGPL--LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPD 143
Query: 531 ---------WAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF- 580
+ +I+ GM Y E + HR+L + +I + E KISDF
Sbjct: 144 ERALTMGDLISFAWQISQGMQYLAEM------KLVHRDLAARNILVAEGRKMKISDFGLS 197
Query: 581 ---WNNTTAAKTGSA-------AMELLETSAVDLESNVYSFGTILFEMIT--GRISYSIE 628
+ + K A+E L +S+V+SFG +L+E++T G I
Sbjct: 198 RDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIP 257
Query: 629 NGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 688
L N + E+P +N EE+ ++ C +P +RP I+
Sbjct: 258 PERLFNLLKTGHRMERP-------------DNCSEEMYRLMLQCWKQEPDKRPVFADISK 304
Query: 689 KLKEI 693
L+++
Sbjct: 305 DLEKM 309
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 114/271 (42%), Gaps = 30/271 (11%)
Query: 424 ACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLS 483
A EDF I G G VY I K++ + +E Q R++++ S
Sbjct: 9 ALEDF-EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGVEHQLRREVEIQS 66
Query: 484 KVNHKNFVNLIGYCEEDEPFTRM-MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMA 542
+ H N + L GY + TR+ ++ EY+P G+++ L Q+ D +A
Sbjct: 67 HLRHPNILRLYGYFHDA---TRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELA 121
Query: 543 YCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSAA-------ME 595
L + H + + HR+++ ++ L KI+DF + + +++ E
Sbjct: 122 NALSYCH--SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTLDYLPPE 179
Query: 596 LLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLK 655
++E D + +++S G + +E + G+ + A+ Y ++ K I
Sbjct: 180 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE---------ANTY---QETYKRISRVEF- 226
Query: 656 SFQENVLEELLVVIKNCVHPDPKQRPSMRGI 686
+F + V E +I + +P QRP +R +
Sbjct: 227 TFPDFVTEGARDLISRLLKHNPSQRPMLREV 257
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 115/271 (42%), Gaps = 30/271 (11%)
Query: 424 ACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLS 483
A EDF I G G VY I K++ + +E Q R++++ S
Sbjct: 9 ALEDF-EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGVEHQLRREVEIQS 66
Query: 484 KVNHKNFVNLIGYCEEDEPFTRM-MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMA 542
+ H N + L GY + TR+ ++ EY+P G+++ L Q+ D +A
Sbjct: 67 HLRHPNILRLYGYFHDA---TRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELA 121
Query: 543 YCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSAA-------ME 595
L + H + + HR+++ ++ L KI+DF + + +++ + E
Sbjct: 122 NALSYCH--SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPE 179
Query: 596 LLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLK 655
++E D + +++S G + +E + G+ + A+ Y ++ K I
Sbjct: 180 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE---------ANTY---QETYKRISRVEF- 226
Query: 656 SFQENVLEELLVVIKNCVHPDPKQRPSMRGI 686
+F + V E +I + +P QRP +R +
Sbjct: 227 TFPDFVTEGARDLISRLLKHNPSQRPMLREV 257
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 117/305 (38%), Gaps = 70/305 (22%)
Query: 434 SFSDGTVGTVYKGTL------SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNH 487
+ +G G V K T + +AV + ++L S+F + L +VNH
Sbjct: 30 TLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEF----NVLKQVNH 85
Query: 488 KNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLH-----------------IQEAEHLD 530
+ + L G C +D P +++ EY+ GSL L +H D
Sbjct: 86 PHVIKLYGACSQDGPL--LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPD 143
Query: 531 ---------WAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF- 580
+ +I+ GM Y E + HR+L + +I + E KISDF
Sbjct: 144 ERALTMGDLISFAWQISQGMQYLAEM------SLVHRDLAARNILVAEGRKMKISDFGLS 197
Query: 581 ---WNNTTAAKTGSA-------AMELLETSAVDLESNVYSFGTILFEMIT--GRISYSIE 628
+ + K A+E L +S+V+SFG +L+E++T G I
Sbjct: 198 RDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIP 257
Query: 629 NGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 688
L N + E+P +N EE+ ++ C +P +RP I+
Sbjct: 258 PERLFNLLKTGHRMERP-------------DNCSEEMYRLMLQCWKQEPDKRPVFADISK 304
Query: 689 KLKEI 693
L+++
Sbjct: 305 DLEKM 309
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 115/271 (42%), Gaps = 30/271 (11%)
Query: 424 ACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLS 483
A EDF I G G VY I K++ + +E Q R++++ S
Sbjct: 11 ALEDF-EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGVEHQLRREVEIQS 68
Query: 484 KVNHKNFVNLIGYCEEDEPFTRM-MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMA 542
+ H N + L GY + TR+ ++ EY+P G+++ L Q+ D +A
Sbjct: 69 HLRHPNILRLYGYFHDA---TRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELA 123
Query: 543 YCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSAA-------ME 595
L + H + + HR+++ ++ L KI+DF + + +++ + E
Sbjct: 124 NALSYCH--SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPE 181
Query: 596 LLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLK 655
++E D + +++S G + +E + G+ + A+ Y ++ K I
Sbjct: 182 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE---------ANTY---QETYKRISRVEF- 228
Query: 656 SFQENVLEELLVVIKNCVHPDPKQRPSMRGI 686
+F + V E +I + +P QRP +R +
Sbjct: 229 TFPDFVTEGARDLISRLLKHNPSQRPMLREV 259
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 115/271 (42%), Gaps = 30/271 (11%)
Query: 424 ACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLS 483
A EDF I G G VY I K++ + +E Q R++++ S
Sbjct: 9 ALEDF-EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGVEHQLRREVEIQS 66
Query: 484 KVNHKNFVNLIGYCEEDEPFTRM-MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMA 542
+ H N + L GY + TR+ ++ EY+P G+++ L Q+ D +A
Sbjct: 67 HLRHPNILRLYGYFHDA---TRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELA 121
Query: 543 YCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSAA-------ME 595
L + H + + HR+++ ++ L KI+DF + + +++ + E
Sbjct: 122 NALSYCH--SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPE 179
Query: 596 LLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLK 655
++E D + +++S G + +E + G+ + A+ Y ++ K I
Sbjct: 180 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE---------ANTY---QETYKRISRVEF- 226
Query: 656 SFQENVLEELLVVIKNCVHPDPKQRPSMRGI 686
+F + V E +I + +P QRP +R +
Sbjct: 227 TFPDFVTEGARDLISRLLKHNPSQRPMLREV 257
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 114/271 (42%), Gaps = 30/271 (11%)
Query: 424 ACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLS 483
A EDF I G G VY I K++ + +E Q R++++ S
Sbjct: 6 ALEDF-EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGVEHQLRREVEIQS 63
Query: 484 KVNHKNFVNLIGYCEEDEPFTRM-MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMA 542
+ H N + L GY + TR+ ++ EY+P G+++ L Q+ D +A
Sbjct: 64 HLRHPNILRLYGYFHDA---TRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELA 118
Query: 543 YCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSAA-------ME 595
L + H + + HR+++ ++ L KI+DF + + +++ E
Sbjct: 119 NALSYCH--SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPE 176
Query: 596 LLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLK 655
++E D + +++S G + +E + G+ + A+ Y ++ K I
Sbjct: 177 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE---------ANTY---QETYKRISRVEF- 223
Query: 656 SFQENVLEELLVVIKNCVHPDPKQRPSMRGI 686
+F + V E +I + +P QRP +R +
Sbjct: 224 TFPDFVTEGARDLISRLLKHNPSQRPMLREV 254
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 123/302 (40%), Gaps = 58/302 (19%)
Query: 432 IGSFSDGTVGTVYKGTLSSGVEI-AVTSTSVKS-RADWSKNLESQFRKKIDTLSKVNHKN 489
+ +G G V++ + T +VK + + S ++++ F+++ +++ ++ N
Sbjct: 52 VRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPN 111
Query: 490 FVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLH------IQEAEHLDWAMRLRI------ 537
V L+G C +P ++FEY G L E L + H D + R R+
Sbjct: 112 IVKLLGVCAVGKPMC--LLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPP 169
Query: 538 --------------AMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN 583
A GMAY E HR+L + + + E+ KI+DF N
Sbjct: 170 PLSCAEQLCIARQVAAGMAYLSERK------FVHRDLATRNCLVGENMVVKIADFGLSRN 223
Query: 584 TTAA----KTGSAAM-------ELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSL 632
+A G+ A+ E + + ES+V+++G +L+E+ SY ++
Sbjct: 224 IYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEI----FSYGLQ---- 275
Query: 633 ENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKE 692
+ E+ + + D + + EN EL +++ C P RPS I L+
Sbjct: 276 ---PYYGMAHEEVIYYVRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQR 332
Query: 693 IT 694
+
Sbjct: 333 MC 334
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 114/271 (42%), Gaps = 30/271 (11%)
Query: 424 ACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLS 483
A EDF I G G VY I K++ + +E Q R++++ S
Sbjct: 6 ALEDF-EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGVEHQLRREVEIQS 63
Query: 484 KVNHKNFVNLIGYCEEDEPFTRM-MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMA 542
+ H N + L GY + TR+ ++ EY+P G+++ L Q+ D +A
Sbjct: 64 HLRHPNILRLYGYFHDA---TRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELA 118
Query: 543 YCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSAA-------ME 595
L + H + + HR+++ ++ L KI+DF + + +++ E
Sbjct: 119 NALSYCH--SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPE 176
Query: 596 LLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLK 655
++E D + +++S G + +E + G+ + A+ Y ++ K I
Sbjct: 177 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE---------ANTY---QETYKRISRVEF- 223
Query: 656 SFQENVLEELLVVIKNCVHPDPKQRPSMRGI 686
+F + V E +I + +P QRP +R +
Sbjct: 224 TFPDFVTEGARDLISRLLKHNPSQRPMLREV 254
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 115/271 (42%), Gaps = 30/271 (11%)
Query: 424 ACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLS 483
A EDF I G G VY I K++ + +E Q R++++ S
Sbjct: 32 ALEDF-EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGVEHQLRREVEIQS 89
Query: 484 KVNHKNFVNLIGYCEEDEPFTRM-MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMA 542
+ H N + L GY + TR+ ++ EY+P G+++ L Q+ D +A
Sbjct: 90 HLRHPNILRLYGYFHDA---TRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELA 144
Query: 543 YCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSAA-------ME 595
L + H + + HR+++ ++ L KI+DF + + +++ + E
Sbjct: 145 NALSYCH--SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPE 202
Query: 596 LLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLK 655
++E D + +++S G + +E + G+ + A+ Y ++ K I
Sbjct: 203 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE---------ANTY---QETYKRISRVEF- 249
Query: 656 SFQENVLEELLVVIKNCVHPDPKQRPSMRGI 686
+F + V E +I + +P QRP +R +
Sbjct: 250 TFPDFVTEGARDLISRLLKHNPSQRPMLREV 280
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 115/271 (42%), Gaps = 30/271 (11%)
Query: 424 ACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLS 483
A EDF I G G VY I K++ + +E Q R++++ S
Sbjct: 3 ALEDF-EIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLE-KAGVEHQLRREVEIQS 60
Query: 484 KVNHKNFVNLIGYCEEDEPFTRM-MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMA 542
+ H N + L GY + TR+ ++ EY+P G+++ L Q+ D +A
Sbjct: 61 HLRHPNILRLYGYFHDA---TRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELA 115
Query: 543 YCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSAA-------ME 595
L + H + + HR+++ ++ L KI+DF + + +++ + E
Sbjct: 116 NALSYCH--SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPE 173
Query: 596 LLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLK 655
++E D + +++S G + +E + G+ + A+ Y ++ K I
Sbjct: 174 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE---------ANTY---QETYKRISRVEF- 220
Query: 656 SFQENVLEELLVVIKNCVHPDPKQRPSMRGI 686
+F + V E +I + +P QRP +R +
Sbjct: 221 TFPDFVTEGARDLISRLLKHNPSQRPMLREV 251
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 117/305 (38%), Gaps = 70/305 (22%)
Query: 434 SFSDGTVGTVYKGTL------SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNH 487
+ +G G V K T + +AV + ++L S+F + L +VNH
Sbjct: 30 TLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEF----NVLKQVNH 85
Query: 488 KNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLH-----------------IQEAEHLD 530
+ + L G C +D P +++ EY+ GSL L +H D
Sbjct: 86 PHVIKLYGACSQDGPL--LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPD 143
Query: 531 ---------WAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF- 580
+ +I+ GM Y E + HR+L + +I + E KISDF
Sbjct: 144 ERALTMGDLISFAWQISQGMQYLAEM------KLVHRDLAARNILVAEGRKMKISDFGLS 197
Query: 581 ---WNNTTAAKTGSA-------AMELLETSAVDLESNVYSFGTILFEMIT--GRISYSIE 628
+ + K A+E L +S+V+SFG +L+E++T G I
Sbjct: 198 RDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIP 257
Query: 629 NGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 688
L N + E+P +N EE+ ++ C +P +RP I+
Sbjct: 258 PERLFNLLKTGHRMERP-------------DNCSEEMYRLMLQCWKQEPDKRPVFADISK 304
Query: 689 KLKEI 693
L+++
Sbjct: 305 DLEKM 309
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 114/271 (42%), Gaps = 30/271 (11%)
Query: 424 ACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLS 483
A EDF I G G VY I K++ + +E Q R++++ S
Sbjct: 6 ALEDF-EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGVEHQLRREVEIQS 63
Query: 484 KVNHKNFVNLIGYCEEDEPFTRM-MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMA 542
+ H N + L GY + TR+ ++ EY+P G+++ L Q+ D +A
Sbjct: 64 HLRHPNILRLYGYFHDA---TRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELA 118
Query: 543 YCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSAA-------ME 595
L + H + + HR+++ ++ L KI+DF + + +++ E
Sbjct: 119 NALSYCH--SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTELCGTLDYLPPE 176
Query: 596 LLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLK 655
++E D + +++S G + +E + G+ + A+ Y ++ K I
Sbjct: 177 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE---------ANTY---QETYKRISRVEF- 223
Query: 656 SFQENVLEELLVVIKNCVHPDPKQRPSMRGI 686
+F + V E +I + +P QRP +R +
Sbjct: 224 TFPDFVTEGARDLISRLLKHNPSQRPMLREV 254
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 119/303 (39%), Gaps = 68/303 (22%)
Query: 438 GTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIG-- 495
G G V++G+ G +AV S + W + E + + H+N + I
Sbjct: 48 GRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFRETE------LYNTVMLRHENILGFIASD 100
Query: 496 YCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMH------ 549
++ Y GSL+++L + LD LRI + +A L H+H
Sbjct: 101 MTSRHSSTQLWLITHYHEMGSLYDYLQLTT---LDTVSCLRIVLSIASGLAHLHIEIFGT 157
Query: 550 QLTPPIAHRNLQSSSIYLTEDYAAKISDFSF-------------WNNTTAAKTGSAAMEL 596
Q P IAHR+L+S +I + ++ I+D NN A E+
Sbjct: 158 QGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEV 217
Query: 597 L-ETSAVDL-----ESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIV 650
L ET VD ++++FG +L+E+ +S NG +E++ + P D+V
Sbjct: 218 LDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVS----NGIVEDY-------KPPFYDVV 266
Query: 651 --DPTLKS------------------FQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKL 690
DP+ + F + L L ++K C + +P R + I L
Sbjct: 267 PNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTL 326
Query: 691 KEI 693
+I
Sbjct: 327 TKI 329
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 114/271 (42%), Gaps = 30/271 (11%)
Query: 424 ACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLS 483
A EDF I G G VY I K++ + +E Q R++++ S
Sbjct: 6 ALEDF-EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGVEHQLRREVEIQS 63
Query: 484 KVNHKNFVNLIGYCEEDEPFTRM-MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMA 542
+ H N + L GY + TR+ ++ EY+P G+++ L Q+ D +A
Sbjct: 64 HLRHPNILRLYGYFHDA---TRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELA 118
Query: 543 YCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSAA-------ME 595
L + H + + HR+++ ++ L KI+DF + + +++ E
Sbjct: 119 NALSYCH--SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTXLCGTLDYLPPE 176
Query: 596 LLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLK 655
++E D + +++S G + +E + G+ + A+ Y ++ K I
Sbjct: 177 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE---------ANTY---QETYKRISRVEF- 223
Query: 656 SFQENVLEELLVVIKNCVHPDPKQRPSMRGI 686
+F + V E +I + +P QRP +R +
Sbjct: 224 TFPDFVTEGARDLISRLLKHNPSQRPMLREV 254
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 114/271 (42%), Gaps = 30/271 (11%)
Query: 424 ACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLS 483
A EDF I G G VY I K++ + +E Q R++++ S
Sbjct: 32 ALEDFE-IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGVEHQLRREVEIQS 89
Query: 484 KVNHKNFVNLIGYCEEDEPFTRM-MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMA 542
+ H N + L GY + TR+ ++ EY+P G+++ L Q+ D +A
Sbjct: 90 HLRHPNILRLYGYFHDA---TRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELA 144
Query: 543 YCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSAA-------ME 595
L + H + + HR+++ ++ L KI+DF + + +++ E
Sbjct: 145 NALSYCH--SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTLDYLPPE 202
Query: 596 LLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLK 655
++E D + +++S G + +E + G+ + A+ Y ++ K I
Sbjct: 203 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE---------ANTY---QETYKRISRVEF- 249
Query: 656 SFQENVLEELLVVIKNCVHPDPKQRPSMRGI 686
+F + V E +I + +P QRP +R +
Sbjct: 250 TFPDFVTEGARDLISRLLKHNPSQRPMLREV 280
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 120/279 (43%), Gaps = 39/279 (13%)
Query: 438 GTVGTVYKGTLSS--GVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIG 495
G G+V + L G + V +K+ S ++E +F ++ + + +H + L+G
Sbjct: 34 GEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIE-EFLREAACMKEFDHPHVAKLVG 92
Query: 496 YCEEDEPFTR----MMVFEYSPNGSLFEHL---HIQEAE-HLDWAMRLRIAMGMAYCLEH 547
R M++ + +G L L I E +L +R + +A +E+
Sbjct: 93 VSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEY 152
Query: 548 MHQLTPPIAHRNLQSSSIYLTEDYAAKISDFS---------FWNNTTAAKTGSA--AMEL 596
+ HR+L + + L ED ++DF ++ A+K A+E
Sbjct: 153 LSSRN--FIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALES 210
Query: 597 LETSAVDLESNVYSFGTILFEMIT-GRISYS-IENGSLENWASEYLKGEQPLKDIVDPTL 654
L + + S+V++FG ++E++T G+ Y+ IEN + N YL G LK
Sbjct: 211 LADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYN----YLIGGNRLKQ------ 260
Query: 655 KSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 693
+EE+ ++ C DPKQRPS + +L+ I
Sbjct: 261 ---PPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENI 296
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 132/311 (42%), Gaps = 53/311 (17%)
Query: 411 TGVPKLKRSELEAACEDFSNIIGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVK-----SR 464
T +P ++ E F +G+ G G V + T G E AV +VK +
Sbjct: 25 TQLPYNEKWEFPRNNLQFGKTLGA---GAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAH 81
Query: 465 ADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQ 524
AD + L S+ K + L + H+N VNL+G C P +++ EY G L L +
Sbjct: 82 ADEKEALMSEL-KIMSHLGQ--HENIVNLLGACTHGGPV--LVITEYCCYGDLLNFLRRK 136
Query: 525 EAEHLD----WAMRLR--------IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYA 572
LD + LR +A GMA+ + HR++ + ++ LT +
Sbjct: 137 AEADLDKEDGRPLELRDLLHFSSQVAQGMAFLA------SKNCIHRDVAARNVLLTNGHV 190
Query: 573 AKISDFSF----WNNTTAAKTGSA-------AMELLETSAVDLESNVYSFGTILFEMITG 621
AKI DF N++ G+A A E + ++S+V+S+G +L+E+ +
Sbjct: 191 AKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS- 249
Query: 622 RISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRP 681
+ + G L N S++ K + + P + + +++ C +P RP
Sbjct: 250 -LGLNPYPGILVN--SKFYKLVKDGYQMAQPAFAP------KNIYSIMQACWALEPTHRP 300
Query: 682 SMRGIAAKLKE 692
+ + I + L+E
Sbjct: 301 TFQQICSFLQE 311
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 115/271 (42%), Gaps = 30/271 (11%)
Query: 424 ACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLS 483
A EDF I G G VY I K++ + +E Q R++++ S
Sbjct: 23 ALEDFE-IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGVEHQLRREVEIQS 80
Query: 484 KVNHKNFVNLIGYCEEDEPFTRM-MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMA 542
+ H N + L GY + TR+ ++ EY+P G+++ L Q+ D +A
Sbjct: 81 HLRHPNILRLYGYFHDA---TRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELA 135
Query: 543 YCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSAA-------ME 595
L + H + + HR+++ ++ L KI+DF + + +++ + E
Sbjct: 136 NALSYCH--SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPE 193
Query: 596 LLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLK 655
++E D + +++S G + +E + G+ + A+ Y ++ K I
Sbjct: 194 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE---------ANTY---QETYKRISRVEF- 240
Query: 656 SFQENVLEELLVVIKNCVHPDPKQRPSMRGI 686
+F + V E +I + +P QRP +R +
Sbjct: 241 TFPDFVTEGARDLISRLLKHNPSQRPMLREV 271
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 114/271 (42%), Gaps = 30/271 (11%)
Query: 424 ACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLS 483
A EDF I G G VY I K++ + +E Q R++++ S
Sbjct: 7 ALEDF-EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGVEHQLRREVEIQS 64
Query: 484 KVNHKNFVNLIGYCEEDEPFTRM-MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMA 542
+ H N + L GY + TR+ ++ EY+P G+++ L Q+ D +A
Sbjct: 65 HLRHPNILRLYGYFHDA---TRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELA 119
Query: 543 YCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSAA-------ME 595
L + H + + HR+++ ++ L KI+DF + + +++ E
Sbjct: 120 NALSYCH--SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPE 177
Query: 596 LLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLK 655
++E D + +++S G + +E + G+ + A+ Y ++ K I
Sbjct: 178 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE---------ANTY---QETYKRISRVEF- 224
Query: 656 SFQENVLEELLVVIKNCVHPDPKQRPSMRGI 686
+F + V E +I + +P QRP +R +
Sbjct: 225 TFPDFVTEGARDLISRLLKHNPSQRPMLREV 255
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 114/271 (42%), Gaps = 30/271 (11%)
Query: 424 ACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLS 483
A EDF I G G VY I K++ + +E Q R++++ S
Sbjct: 11 ALEDF-EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGVEHQLRREVEIQS 68
Query: 484 KVNHKNFVNLIGYCEEDEPFTRM-MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMA 542
+ H N + L GY + TR+ ++ EY+P G+++ L Q+ D +A
Sbjct: 69 HLRHPNILRLYGYFHDA---TRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELA 123
Query: 543 YCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSAA-------ME 595
L + H + + HR+++ ++ L KI+DF + + +++ + E
Sbjct: 124 NALSYCH--SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPE 181
Query: 596 LLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLK 655
+E D + +++S G + +E + G+ + A+ Y ++ K I
Sbjct: 182 XIEGRXHDEKVDLWSLGVLCYEFLVGKPPFE---------ANTY---QETYKRISRVEF- 228
Query: 656 SFQENVLEELLVVIKNCVHPDPKQRPSMRGI 686
+F + V E +I + +P QRP +R +
Sbjct: 229 TFPDFVTEGARDLISRLLKHNPSQRPXLREV 259
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 114/271 (42%), Gaps = 30/271 (11%)
Query: 424 ACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLS 483
A EDF I G G VY I K++ + +E Q R++++ S
Sbjct: 11 ALEDF-EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGVEHQLRREVEIQS 68
Query: 484 KVNHKNFVNLIGYCEEDEPFTRM-MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMA 542
+ H N + L GY + TR+ ++ EY+P G+++ L Q+ D +A
Sbjct: 69 HLRHPNILRLYGYFHDA---TRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELA 123
Query: 543 YCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSAA-------ME 595
L + H + + HR+++ ++ L KI+DF + + +++ E
Sbjct: 124 NALSYCH--SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPE 181
Query: 596 LLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLK 655
++E D + +++S G + +E + G+ + A+ Y ++ K I
Sbjct: 182 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE---------ANTY---QETYKRISRVEF- 228
Query: 656 SFQENVLEELLVVIKNCVHPDPKQRPSMRGI 686
+F + V E +I + +P QRP +R +
Sbjct: 229 TFPDFVTEGARDLISRLLKHNPSQRPMLREV 259
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 114/271 (42%), Gaps = 30/271 (11%)
Query: 424 ACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLS 483
A EDF I G G VY I K++ + +E Q R++++ S
Sbjct: 8 ALEDF-EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGVEHQLRREVEIQS 65
Query: 484 KVNHKNFVNLIGYCEEDEPFTRM-MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMA 542
+ H N + L GY + TR+ ++ EY+P G+++ L Q+ D +A
Sbjct: 66 HLRHPNILRLYGYFHDA---TRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELA 120
Query: 543 YCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSAA-------ME 595
L + H + + HR+++ ++ L KI+DF + + +++ E
Sbjct: 121 NALSYCH--SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPE 178
Query: 596 LLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLK 655
++E D + +++S G + +E + G+ + A+ Y ++ K I
Sbjct: 179 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE---------ANTY---QETYKRISRVEF- 225
Query: 656 SFQENVLEELLVVIKNCVHPDPKQRPSMRGI 686
+F + V E +I + +P QRP +R +
Sbjct: 226 TFPDFVTEGARDLISRLLKHNPSQRPMLREV 256
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 114/271 (42%), Gaps = 30/271 (11%)
Query: 424 ACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLS 483
A EDF I G G VY I K++ + +E Q R++++ S
Sbjct: 6 ALEDF-EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGVEHQLRREVEIQS 63
Query: 484 KVNHKNFVNLIGYCEEDEPFTRM-MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMA 542
+ H N + L GY + TR+ ++ EY+P G+++ L Q+ D +A
Sbjct: 64 HLRHPNILRLYGYFHDA---TRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELA 118
Query: 543 YCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSAA-------ME 595
L + H + + HR+++ ++ L KI+DF + + +++ E
Sbjct: 119 NALSYCH--SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPE 176
Query: 596 LLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLK 655
++E D + +++S G + +E + G+ + A+ Y ++ K I
Sbjct: 177 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE---------ANTY---QETYKRISRVEF- 223
Query: 656 SFQENVLEELLVVIKNCVHPDPKQRPSMRGI 686
+F + V E +I + +P QRP +R +
Sbjct: 224 TFPDFVTEGARDLISRLLKHNPSQRPMLREV 254
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 119/303 (39%), Gaps = 68/303 (22%)
Query: 438 GTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIG-- 495
G G V++G+ G +AV S + W + E + + H+N + I
Sbjct: 19 GRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFRETE------LYNTVMLRHENILGFIASD 71
Query: 496 YCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMH------ 549
++ Y GSL+++L + LD LRI + +A L H+H
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYLQLTT---LDTVSCLRIVLSIASGLAHLHIEIFGT 128
Query: 550 QLTPPIAHRNLQSSSIYLTEDYAAKISDFSF-------------WNNTTAAKTGSAAMEL 596
Q P IAHR+L+S +I + ++ I+D NN A E+
Sbjct: 129 QGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEV 188
Query: 597 L-ETSAVDL-----ESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIV 650
L ET VD ++++FG +L+E+ +S NG +E++ + P D+V
Sbjct: 189 LDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVS----NGIVEDY-------KPPFYDVV 237
Query: 651 --DPTLKS------------------FQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKL 690
DP+ + F + L L ++K C + +P R + I L
Sbjct: 238 PNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTL 297
Query: 691 KEI 693
+I
Sbjct: 298 TKI 300
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 114/271 (42%), Gaps = 30/271 (11%)
Query: 424 ACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLS 483
A EDF I G G VY I K++ + +E Q R++++ S
Sbjct: 9 ALEDF-EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGVEHQLRREVEIQS 66
Query: 484 KVNHKNFVNLIGYCEEDEPFTRM-MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMA 542
+ H N + L GY + TR+ ++ EY+P G+++ L Q+ D +A
Sbjct: 67 HLRHPNILRLYGYFHDA---TRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELA 121
Query: 543 YCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSAA-------ME 595
L + H + + HR+++ ++ L KI+DF + + +++ E
Sbjct: 122 NALSYCH--SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPE 179
Query: 596 LLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLK 655
++E D + +++S G + +E + G+ + A+ Y ++ K I
Sbjct: 180 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE---------ANTY---QETYKRISRVEF- 226
Query: 656 SFQENVLEELLVVIKNCVHPDPKQRPSMRGI 686
+F + V E +I + +P QRP +R +
Sbjct: 227 TFPDFVTEGARDLISRLLKHNPSQRPMLREV 257
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 119/303 (39%), Gaps = 68/303 (22%)
Query: 438 GTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIG-- 495
G G V++G+ G +AV S + W + E + + H+N + I
Sbjct: 19 GRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFRETE------LYNTVMLRHENILGFIASD 71
Query: 496 YCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMH------ 549
++ Y GSL+++L + LD LRI + +A L H+H
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYLQLTT---LDTVSCLRIVLSIASGLAHLHIEIFGT 128
Query: 550 QLTPPIAHRNLQSSSIYLTEDYAAKISDFSF-------------WNNTTAAKTGSAAMEL 596
Q P IAHR+L+S +I + ++ I+D NN A E+
Sbjct: 129 QGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEV 188
Query: 597 L-ETSAVDL-----ESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIV 650
L ET VD ++++FG +L+E+ +S NG +E++ + P D+V
Sbjct: 189 LDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVS----NGIVEDY-------KPPFYDVV 237
Query: 651 --DPTLKS------------------FQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKL 690
DP+ + F + L L ++K C + +P R + I L
Sbjct: 238 PNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTL 297
Query: 691 KEI 693
+I
Sbjct: 298 TKI 300
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 77/166 (46%), Gaps = 23/166 (13%)
Query: 470 NLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLH---IQEA 526
L S ++++I+ L + H++ V G CE+ + +V EY P GSL ++L + A
Sbjct: 53 QLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLA 112
Query: 527 EHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA 586
+ L +A +I GMAY L H + HR L + ++ L D KI DF
Sbjct: 113 QLLLFAQ--QICEGMAY-LHAQHYI-----HRALAARNVLLDNDRLVKIGDFGLAKAVPE 164
Query: 587 A-------KTGSA-----AMELLETSAVDLESNVYSFGTILFEMIT 620
+ G + A E L+ S+V+SFG L+E++T
Sbjct: 165 GHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 77/166 (46%), Gaps = 23/166 (13%)
Query: 470 NLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLH---IQEA 526
L S ++++I+ L + H++ V G CE+ + +V EY P GSL ++L + A
Sbjct: 52 QLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLA 111
Query: 527 EHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA 586
+ L +A +I GMAY L H + HR L + ++ L D KI DF
Sbjct: 112 QLLLFAQ--QICEGMAY-LHAQHYI-----HRALAARNVLLDNDRLVKIGDFGLAKAVPE 163
Query: 587 A-------KTGSA-----AMELLETSAVDLESNVYSFGTILFEMIT 620
+ G + A E L+ S+V+SFG L+E++T
Sbjct: 164 GHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 132/311 (42%), Gaps = 53/311 (17%)
Query: 411 TGVPKLKRSELEAACEDFSNIIGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVK-----SR 464
T +P ++ E F +G+ G G V + T G E AV +VK +
Sbjct: 33 TQLPYNEKWEFPRNNLQFGKTLGA---GAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAH 89
Query: 465 ADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQ 524
AD + L S+ K + L + H+N VNL+G C P +++ EY G L L +
Sbjct: 90 ADEKEALMSEL-KIMSHLGQ--HENIVNLLGACTHGGPV--LVITEYCCYGDLLNFLRRK 144
Query: 525 EAEHLD----WAMRLR--------IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYA 572
LD + LR +A GMA+ + HR++ + ++ LT +
Sbjct: 145 AEADLDKEDGRPLELRDLLHFSSQVAQGMAFLA------SKNCIHRDVAARNVLLTNGHV 198
Query: 573 AKISDFSF----WNNTTAAKTGSA-------AMELLETSAVDLESNVYSFGTILFEMITG 621
AKI DF N++ G+A A E + ++S+V+S+G +L+E+ +
Sbjct: 199 AKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS- 257
Query: 622 RISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRP 681
+ + G L N S++ K + + P + + +++ C +P RP
Sbjct: 258 -LGLNPYPGILVN--SKFYKLVKDGYQMAQPAFAP------KNIYSIMQACWALEPTHRP 308
Query: 682 SMRGIAAKLKE 692
+ + I + L+E
Sbjct: 309 TFQQICSFLQE 319
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 93/209 (44%), Gaps = 24/209 (11%)
Query: 432 IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFV 491
+G S G V Y T V + + + V +++D ++ + ++I L + H + +
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSD----MQGRIEREISYLRLLRHPHII 71
Query: 492 NLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRL--RIAMGMAYCLEHMH 549
L + + +MV EY+ N LF+++ ++ A R +I + YC H H
Sbjct: 72 KLYDVIKSKDEI--IMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQIISAVEYC--HRH 126
Query: 550 QLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWN--------NTTAAKTGSAAMELLETSA 601
+ I HR+L+ ++ L E KI+DF N T+ AA E++
Sbjct: 127 K----IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKL 182
Query: 602 -VDLESNVYSFGTILFEMITGRISYSIEN 629
E +V+S G IL+ M+ R+ + E+
Sbjct: 183 YAGPEVDVWSCGVILYVMLCRRLPFDDES 211
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 93/209 (44%), Gaps = 24/209 (11%)
Query: 432 IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFV 491
+G S G V Y T V + + + V +++D ++ + ++I L + H + +
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSD----MQGRIEREISYLRLLRHPHII 67
Query: 492 NLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRL--RIAMGMAYCLEHMH 549
L + + +MV EY+ N LF+++ ++ A R +I + YC H H
Sbjct: 68 KLYDVIKSKDEI--IMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQIISAVEYC--HRH 122
Query: 550 QLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWN--------NTTAAKTGSAAMELLETSA 601
+ I HR+L+ ++ L E KI+DF N T+ AA E++
Sbjct: 123 K----IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKL 178
Query: 602 -VDLESNVYSFGTILFEMITGRISYSIEN 629
E +V+S G IL+ M+ R+ + E+
Sbjct: 179 YAGPEVDVWSCGVILYVMLCRRLPFDDES 207
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 93/209 (44%), Gaps = 24/209 (11%)
Query: 432 IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFV 491
+G S G V Y T V + + + V +++D ++ + ++I L + H + +
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSD----MQGRIEREISYLRLLRHPHII 76
Query: 492 NLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRL--RIAMGMAYCLEHMH 549
L + + +MV EY+ N LF+++ ++ A R +I + YC H H
Sbjct: 77 KLYDVIKSKDEI--IMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQIISAVEYC--HRH 131
Query: 550 QLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWN--------NTTAAKTGSAAMELLETSA 601
+ I HR+L+ ++ L E KI+DF N T+ AA E++
Sbjct: 132 K----IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKL 187
Query: 602 -VDLESNVYSFGTILFEMITGRISYSIEN 629
E +V+S G IL+ M+ R+ + E+
Sbjct: 188 YAGPEVDVWSCGVILYVMLCRRLPFDDES 216
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 109/289 (37%), Gaps = 48/289 (16%)
Query: 431 IIGSFSDGTVGTVYKGT----LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN 486
++ G+ G VY+G + E V +V A + +E F + +
Sbjct: 18 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE--FLNEASVMKGFT 75
Query: 487 HKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLD------------WAMR 534
+ V L+G + +P ++V E +G L +L E + M
Sbjct: 76 CHHVVRLLGVVSKGQP--TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMA 133
Query: 535 LRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN---TTAAKTGS 591
IA GMAY HR+L + + + D+ KI DF + T + G
Sbjct: 134 AEIADGMAYLN------AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGG 187
Query: 592 AAM--------ELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGE 643
+ E L+ S+++SFG +L+E+ SL + L E
Sbjct: 188 KGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEIT-----------SLAEQPYQGLSNE 236
Query: 644 QPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKE 692
Q LK ++D +N E + +++ C +PK RP+ I LK+
Sbjct: 237 QVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKD 285
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 93/209 (44%), Gaps = 24/209 (11%)
Query: 432 IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFV 491
+G S G V Y T V + + + V +++D ++ + ++I L + H + +
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSD----MQGRIEREISYLRLLRHPHII 77
Query: 492 NLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRL--RIAMGMAYCLEHMH 549
L + + +MV EY+ N LF+++ ++ A R +I + YC H H
Sbjct: 78 KLYDVIKSKDEI--IMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQIISAVEYC--HRH 132
Query: 550 QLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWN--------NTTAAKTGSAAMELLETSA 601
+ I HR+L+ ++ L E KI+DF N T+ AA E++
Sbjct: 133 K----IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKL 188
Query: 602 -VDLESNVYSFGTILFEMITGRISYSIEN 629
E +V+S G IL+ M+ R+ + E+
Sbjct: 189 YAGPEVDVWSCGVILYVMLCRRLPFDDES 217
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 91/210 (43%), Gaps = 35/210 (16%)
Query: 430 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKID---TLSKVN 486
++GS G GTV+KG E +K D K+ F+ D + ++
Sbjct: 37 KVLGS---GVFGTVHKGVWIPEGESIKIPVCIKVIED--KSGRQSFQAVTDHMLAIGSLD 91
Query: 487 HKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEH-----LDWAMRLRIAMGM 541
H + V L+G C + +V +Y P GSL +H+ L+W ++IA GM
Sbjct: 92 HAHIVRLLGLCPGS---SLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWG--VQIAKGM 146
Query: 542 AYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT---------TAAKTGSA 592
Y EH + HRNL + ++ L +++DF + + AKT
Sbjct: 147 YYLEEHG------MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIK 200
Query: 593 --AMELLETSAVDLESNVYSFGTILFEMIT 620
A+E + +S+V+S+G ++E++T
Sbjct: 201 WMALESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 109/289 (37%), Gaps = 48/289 (16%)
Query: 431 IIGSFSDGTVGTVYKGT----LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN 486
++ G+ G VY+G + E V +V A + +E F + +
Sbjct: 21 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE--FLNEASVMKGFT 78
Query: 487 HKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLD------------WAMR 534
+ V L+G + +P ++V E +G L +L E + M
Sbjct: 79 CHHVVRLLGVVSKGQP--TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMA 136
Query: 535 LRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN---TTAAKTGS 591
IA GMAY HR+L + + + D+ KI DF + T + G
Sbjct: 137 AEIADGMAYLN------AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGG 190
Query: 592 AAM--------ELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGE 643
+ E L+ S+++SFG +L+E+ SL + L E
Sbjct: 191 KGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEIT-----------SLAEQPYQGLSNE 239
Query: 644 QPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKE 692
Q LK ++D +N E + +++ C +PK RP+ I LK+
Sbjct: 240 QVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKD 288
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 91/210 (43%), Gaps = 35/210 (16%)
Query: 430 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKID---TLSKVN 486
++GS G GTV+KG E +K D K+ F+ D + ++
Sbjct: 19 KVLGS---GVFGTVHKGVWIPEGESIKIPVCIKVIED--KSGRQSFQAVTDHMLAIGSLD 73
Query: 487 HKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEH-----LDWAMRLRIAMGM 541
H + V L+G C + +V +Y P GSL +H+ L+W ++IA GM
Sbjct: 74 HAHIVRLLGLCPGS---SLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWG--VQIAKGM 128
Query: 542 AYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT---------TAAKTGSA 592
Y EH + HRNL + ++ L +++DF + + AKT
Sbjct: 129 YYLEEH------GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIK 182
Query: 593 --AMELLETSAVDLESNVYSFGTILFEMIT 620
A+E + +S+V+S+G ++E++T
Sbjct: 183 WMALESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 99/220 (45%), Gaps = 32/220 (14%)
Query: 420 ELEAACEDFSNIIGSFSDGTVGTVYKG--TLSSGVEIAVTSTSVKSRADWSKNLESQFRK 477
E++ +C +IG+ G G V G L EI V ++KS +++ F
Sbjct: 29 EIDISCVKIEQVIGA---GEFGEVCSGHLKLPGKREIFVAIKTLKS--GYTEKQRRDFLS 83
Query: 478 KIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEH--LDWAMRL 535
+ + + +H N ++L G + P M++ E+ NGSL L + + + L
Sbjct: 84 EASIMGQFDHPNVIHLEGVVTKSTPV--MIITEFMENGSLDSFLRQNDGQFTVIQLVGML 141
Query: 536 R-IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFS---FWNNTTAAKTGS 591
R IA GM Y + + HR+L + +I + + K+SDF F + T+ T +
Sbjct: 142 RGIAAGMKYLADMNY------VHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYT 195
Query: 592 AAM-----------ELLETSAVDLESNVYSFGTILFEMIT 620
+A+ E ++ S+V+S+G +++E+++
Sbjct: 196 SALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 235
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 92/212 (43%), Gaps = 19/212 (8%)
Query: 419 SELEAACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKK 478
S+ + EDF +I G G VY I K++ + +E Q R++
Sbjct: 5 SKRQWTLEDF-DIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLE-KAGVEHQLRRE 62
Query: 479 IDTLSKVNHKNFVNLIGYCEEDEPFTRM-MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRI 537
++ S + H N + L GY + TR+ ++ EY+P G+++ L Q+ D
Sbjct: 63 VEIQSHLRHPNILRLYGYFHDA---TRVYLILEYAPLGTVYREL--QKLSRFDEQRTATY 117
Query: 538 AMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWN--------NTTAAKT 589
+A L + H + + HR+++ ++ L + KI+DF W+ +T
Sbjct: 118 ITELANALSYCH--SKRVIHRDIKPENLLLGSNGELKIADFG-WSVHAPSSRRDTLCGTL 174
Query: 590 GSAAMELLETSAVDLESNVYSFGTILFEMITG 621
E++E D + +++S G + +E + G
Sbjct: 175 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 115/271 (42%), Gaps = 30/271 (11%)
Query: 424 ACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLS 483
A EDF I G G VY I K++ + +E Q R++++ S
Sbjct: 9 ALEDF-EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGVEHQLRREVEIQS 66
Query: 484 KVNHKNFVNLIGYCEEDEPFTRM-MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMA 542
+ H N + L GY + TR+ ++ EY+P G+++ L Q+ D +A
Sbjct: 67 HLRHPNILRLYGYFHDA---TRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELA 121
Query: 543 YCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSAA-------ME 595
L + H + + HR+++ ++ L KI++F + + +++ + E
Sbjct: 122 NALSYCH--SKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTLDYLPPE 179
Query: 596 LLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLK 655
++E D + +++S G + +E + G+ + A+ Y ++ K I
Sbjct: 180 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE---------ANTY---QETYKRISRVEF- 226
Query: 656 SFQENVLEELLVVIKNCVHPDPKQRPSMRGI 686
+F + V E +I + +P QRP +R +
Sbjct: 227 TFPDFVTEGARDLISRLLKHNPSQRPMLREV 257
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 94/211 (44%), Gaps = 17/211 (8%)
Query: 419 SELEAACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKK 478
S+ + EDF +I G G VY I K++ + +E Q R++
Sbjct: 5 SKRQWTLEDF-DIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLE-KAGVEHQLRRE 62
Query: 479 IDTLSKVNHKNFVNLIGYCEEDEPFTRM-MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRI 537
++ S + H N + L GY + TR+ ++ EY+P G+++ L Q+ D
Sbjct: 63 VEIQSHLRHPNILRLYGYFHDA---TRVYLILEYAPLGTVYREL--QKLSRFDEQRTATY 117
Query: 538 AMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSAA---- 593
+A L + H + + HR+++ ++ L + KI+DF + + +++ +
Sbjct: 118 ITELANALSYCH--SKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRTTLCGTLD 175
Query: 594 ---MELLETSAVDLESNVYSFGTILFEMITG 621
E++E D + +++S G + +E + G
Sbjct: 176 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 123/312 (39%), Gaps = 70/312 (22%)
Query: 431 IIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNF 490
++ G G V++G L G +AV S + W + E I + H N
Sbjct: 12 LVECVGKGRYGEVWRG-LWHGESVAVKIFSSRDEQSWFRETE------IYNTVLLRHDNI 64
Query: 491 VNLIG--YCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAE-HLDWAMRLRIAMGMAYCLEH 547
+ I + ++ Y +GSL++ L Q E HL LR+A+ A L H
Sbjct: 65 LGFIASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHL----ALRLAVSAACGLAH 120
Query: 548 MH------QLTPPIAHRNLQSSSIYLTEDYAAKISDFSF-------------WNNTTAAK 588
+H Q P IAHR+ +S ++ + + I+D NN
Sbjct: 121 LHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGT 180
Query: 589 TGSAAMELL-ETSAVD-LES----NVYSFGTILFEMITGRISYSIENGSLENWASEYLKG 642
A E+L E D ES ++++FG +L+E+ +I NG +E++
Sbjct: 181 KRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEIA----RRTIVNGIVEDY------- 229
Query: 643 EQPLKDIV--DPTLKSFQ------------------ENVLEELLVVIKNCVHPDPKQRPS 682
P D+V DP+ + + + VL L +++ C +P+P R +
Sbjct: 230 RPPFYDVVPNDPSFEDMKKVVCVDQQTPTIPNRLAADPVLSGLAQMMRECWYPNPSARLT 289
Query: 683 MRGIAAKLKEIT 694
I L++I+
Sbjct: 290 ALRIKKTLQKIS 301
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 127/315 (40%), Gaps = 84/315 (26%)
Query: 427 DFSNIIGSFSDGTV--GTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSK 484
+F ++GS + G V T Y G +GV I V +K +AD S+ ++ +++
Sbjct: 48 EFGKVLGSGAFGKVMNATAY-GISKTGVSIQVAVKMLKEKADSSER--EALMSELKMMTQ 104
Query: 485 V-NHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHL------------------HIQE 525
+ +H+N VNL+G C P ++FEY G L +L ++E
Sbjct: 105 LGSHENIVNLLGACTLSGPI--YLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEE 162
Query: 526 AEHLD-------WAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF 578
E L+ ++A GM + LE HR+L + ++ +T KI DF
Sbjct: 163 EEDLNVLTFEDLLCFAYQVAKGMEF-LEF-----KSCVHRDLAARNVLVTHGKVVKICDF 216
Query: 579 SF----WNNTTAAKTGSA-------AMELLETSAVDLESNVYSFGTILFEM--------- 618
+++ G+A A E L ++S+V+S+G +L+E+
Sbjct: 217 GLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYP 276
Query: 619 ---ITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHP 675
+ I+NG K +QP EE+ +++++C
Sbjct: 277 GIPVDANFYKLIQNG---------FKMDQPFY-------------ATEEIYIIMQSCWAF 314
Query: 676 DPKQRPSMRGIAAKL 690
D ++RPS + + L
Sbjct: 315 DSRKRPSFPNLTSFL 329
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 115/271 (42%), Gaps = 30/271 (11%)
Query: 424 ACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLS 483
A EDF I G G VY I K++ + +E Q R++++ S
Sbjct: 8 ALEDF-EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGVEHQLRREVEIQS 65
Query: 484 KVNHKNFVNLIGYCEEDEPFTRM-MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMA 542
+ H N + L GY + TR+ ++ EY+P G+++ L Q+ D +A
Sbjct: 66 HLRHPNILRLYGYFHDA---TRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELA 120
Query: 543 YCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSAA-------ME 595
L + H + + HR+++ ++ L KI++F + + +++ + E
Sbjct: 121 NALSYCH--SKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTLDYLPPE 178
Query: 596 LLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLK 655
++E D + +++S G + +E + G+ + A+ Y ++ K I
Sbjct: 179 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE---------ANTY---QETYKRISRVEF- 225
Query: 656 SFQENVLEELLVVIKNCVHPDPKQRPSMRGI 686
+F + V E +I + +P QRP +R +
Sbjct: 226 TFPDFVTEGARDLISRLLKHNPSQRPMLREV 256
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 95/219 (43%), Gaps = 30/219 (13%)
Query: 419 SELEAACEDFSNIIGSFSDGTVGTVYKGTLS--SGVEIAVTSTSVKSRADWSKNLESQFR 476
EL+A+C +IG+ G G V G L ++AV ++K +++ F
Sbjct: 38 KELDASCIKIERVIGA---GEFGEVCSGRLKLPGKRDVAVAIKTLK--VGYTEKQRRDFL 92
Query: 477 KKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSL--FEHLHIQEAEHLDWAMR 534
+ + + +H N V+L G +P M+V E+ NG+L F H + +
Sbjct: 93 CEASIMGQFDHPNVVHLEGVVTRGKPV--MIVIEFMENGALDAFLRKHDGQFTVIQLVGM 150
Query: 535 LR-IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWN----------N 583
LR IA GM Y + + HR+L + +I + + K+SDF
Sbjct: 151 LRGIAAGMRYLADMGY------VHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYT 204
Query: 584 TTAAKTGS--AAMELLETSAVDLESNVYSFGTILFEMIT 620
TT K A E ++ S+V+S+G +++E+++
Sbjct: 205 TTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 243
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 109/289 (37%), Gaps = 48/289 (16%)
Query: 431 IIGSFSDGTVGTVYKGT----LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN 486
++ G+ G VY+G + E V +V A + +E F + +
Sbjct: 21 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE--FLNEASVMKGFT 78
Query: 487 HKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLD------------WAMR 534
+ V L+G + +P ++V E +G L +L E + M
Sbjct: 79 CHHVVRLLGVVSKGQP--TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMA 136
Query: 535 LRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN---TTAAKTGS 591
IA GMAY HR+L + + + D+ KI DF + T + G
Sbjct: 137 AEIADGMAYLN------AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGG 190
Query: 592 AAM--------ELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGE 643
+ E L+ S+++SFG +L+E+ SL + L E
Sbjct: 191 KGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEIT-----------SLAEQPYQGLSNE 239
Query: 644 QPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKE 692
Q LK ++D +N E + +++ C +PK RP+ I LK+
Sbjct: 240 QVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKD 288
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 109/289 (37%), Gaps = 48/289 (16%)
Query: 431 IIGSFSDGTVGTVYKGT----LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN 486
++ G+ G VY+G + E V +V A + +E F + +
Sbjct: 20 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE--FLNEASVMKGFT 77
Query: 487 HKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLD------------WAMR 534
+ V L+G + +P ++V E +G L +L E + M
Sbjct: 78 CHHVVRLLGVVSKGQP--TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMA 135
Query: 535 LRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN---TTAAKTGS 591
IA GMAY HR+L + + + D+ KI DF + T + G
Sbjct: 136 AEIADGMAYLN------AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGG 189
Query: 592 AAM--------ELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGE 643
+ E L+ S+++SFG +L+E+ SL + L E
Sbjct: 190 KGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEIT-----------SLAEQPYQGLSNE 238
Query: 644 QPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKE 692
Q LK ++D +N E + +++ C +PK RP+ I LK+
Sbjct: 239 QVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKD 287
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 91/207 (43%), Gaps = 26/207 (12%)
Query: 433 GSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVN 492
GSF + T YK V + S + ++D +E ++I L + H + +
Sbjct: 20 GSFGKVKLATHYKT--QQKVALKFISRQLLKKSDMHMRVE----REISYLKLLRHPHIIK 73
Query: 493 LIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRL--RIAMGMAYCLEHMHQ 550
L Y P +MV EY+ G LF+++ ++ D R +I + YC H H+
Sbjct: 74 L--YDVITTPTDIVMVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYC--HRHK 128
Query: 551 LTPPIAHRNLQSSSIYLTEDYAAKISDFSFWN--------NTTAAKTGSAAMELLETS-A 601
I HR+L+ ++ L ++ KI+DF N T+ AA E++
Sbjct: 129 ----IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLY 184
Query: 602 VDLESNVYSFGTILFEMITGRISYSIE 628
E +V+S G +L+ M+ GR+ + E
Sbjct: 185 AGPEVDVWSCGIVLYVMLVGRLPFDDE 211
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 105/233 (45%), Gaps = 29/233 (12%)
Query: 464 RADWSKN--LESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRM--MVFEYSPNGSLFE 519
RAD +++ +FR++ + +NH V + E + P + +V EY +L +
Sbjct: 46 RADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRD 105
Query: 520 HLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFS 579
+H + A+ + A H + I HR+++ ++I ++ A K+ DF
Sbjct: 106 IVHTEGPMTPKRAIEVIADACQALNFSHQNG----IIHRDVKPANIMISATNAVKVMDFG 161
Query: 580 FWN---------NTTAAKTGSA---AMELLETSAVDLESNVYSFGTILFEMITGRISYSI 627
TAA G+A + E +VD S+VYS G +L+E++TG ++
Sbjct: 162 IARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFT- 220
Query: 628 ENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQR 680
S ++ A ++++ +D + P+ + E + +L V+ + +P+ R
Sbjct: 221 -GDSPDSVAYQHVR-----EDPIPPSAR--HEGLSADLDAVVLKALAKNPENR 265
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 109/289 (37%), Gaps = 48/289 (16%)
Query: 431 IIGSFSDGTVGTVYKGT----LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN 486
++ G+ G VY+G + E V +V A + +E F + +
Sbjct: 21 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE--FLNEASVMKGFT 78
Query: 487 HKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLD------------WAMR 534
+ V L+G + +P ++V E +G L +L E + M
Sbjct: 79 CHHVVRLLGVVSKGQP--TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMA 136
Query: 535 LRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN---TTAAKTGS 591
IA GMAY HR+L + + + D+ KI DF + T + G
Sbjct: 137 AEIADGMAYLN------AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGG 190
Query: 592 AAM--------ELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGE 643
+ E L+ S+++SFG +L+E+ SL + L E
Sbjct: 191 KGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEIT-----------SLAEQPYQGLSNE 239
Query: 644 QPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKE 692
Q LK ++D +N E + +++ C +PK RP+ I LK+
Sbjct: 240 QVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKD 288
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 30/218 (13%)
Query: 420 ELEAACEDFSNIIGSFSDGTVGTVYKGTLS--SGVEIAVTSTSVKSRADWSKNLESQFRK 477
EL+A ++G+ G G V G L S EI+V ++K +++ F
Sbjct: 41 ELDATNISIDKVVGA---GEFGEVCSGRLKLPSKKEISVAIKTLK--VGYTEKQRRDFLG 95
Query: 478 KIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEH--LDWAMRL 535
+ + + +H N + L G + +P M+V EY NGSL L +A+ + L
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPV--MIVTEYMENGSLDSFLRKHDAQFTVIQLVGML 153
Query: 536 R-IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW----NNTTAAKT- 589
R IA GM Y + + HR+L + +I + + K+SDF ++ AA T
Sbjct: 154 RGIASGMKYLSDMGY------VHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTT 207
Query: 590 --GSAAMELLETSAVDLE-----SNVYSFGTILFEMIT 620
G + A+ S+V+S+G +L+E+++
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 100/236 (42%), Gaps = 29/236 (12%)
Query: 468 SKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEA 526
SK +E+ +K+I L H N V L + +V E G LFE I++
Sbjct: 45 SKRMEANTQKEITALKLCEGHPNIVKLHEVFHDQ--LHTFLVMELLNGGELFER--IKKK 100
Query: 527 EHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTED---YAAKISDFSFWN- 582
+H I + + HMH + + HR+L+ ++ T++ KI DF F
Sbjct: 101 KHFSETEASYIMRKLVSAVSHMHDVG--VVHRDLKPENLLFTDENDNLEIKIIDFGFARL 158
Query: 583 --------NTTAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLEN 634
T AA ELL + D +++S G IL+ M++G++ + + SL
Sbjct: 159 KPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTC 218
Query: 635 WASEYLKGEQPLKDIVDPTLKSFQ----ENVLEELLVVIKNCVHPDPKQRPSMRGI 686
++ + + D SF+ +NV +E +I+ + DP +R M G+
Sbjct: 219 TSAVEIMKKIKKGDF------SFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGL 268
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 30/218 (13%)
Query: 420 ELEAACEDFSNIIGSFSDGTVGTVYKGTLS--SGVEIAVTSTSVKSRADWSKNLESQFRK 477
EL+A ++G+ G G V G L S EI+V ++K +++ F
Sbjct: 41 ELDATNISIDKVVGA---GEFGEVCSGRLKLPSKKEISVAIKTLK--VGYTEKQRRDFLG 95
Query: 478 KIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEH--LDWAMRL 535
+ + + +H N + L G + +P M+V EY NGSL L +A+ + L
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPV--MIVTEYMENGSLDSFLRKHDAQFTVIQLVGML 153
Query: 536 R-IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW----NNTTAAKT- 589
R IA GM Y + + HR+L + +I + + K+SDF ++ AA T
Sbjct: 154 RGIASGMKYLSDMGY------VHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTT 207
Query: 590 --GSAAMELLETSAVDLE-----SNVYSFGTILFEMIT 620
G + A+ S+V+S+G +L+E+++
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 98/220 (44%), Gaps = 32/220 (14%)
Query: 420 ELEAACEDFSNIIGSFSDGTVGTVYKG--TLSSGVEIAVTSTSVKSRADWSKNLESQFRK 477
E++ +C +IG+ G G V G L EI V ++KS +++ F
Sbjct: 3 EIDISCVKIEQVIGA---GEFGEVCSGHLKLPGKREIFVAIKTLKS--GYTEKQRRDFLS 57
Query: 478 KIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEH--LDWAMRL 535
+ + + +H N ++L G + P M++ E+ NGSL L + + + L
Sbjct: 58 EASIMGQFDHPNVIHLEGVVTKSTPV--MIITEFMENGSLDSFLRQNDGQFTVIQLVGML 115
Query: 536 R-IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFS---FWNNTTAAKTGS 591
R IA GM Y + + HR L + +I + + K+SDF F + T+ T +
Sbjct: 116 RGIAAGMKYLADMNY------VHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYT 169
Query: 592 AAM-----------ELLETSAVDLESNVYSFGTILFEMIT 620
+A+ E ++ S+V+S+G +++E+++
Sbjct: 170 SALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 209
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 108/289 (37%), Gaps = 48/289 (16%)
Query: 431 IIGSFSDGTVGTVYKGT----LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN 486
++ G+ G VY+G + E V +V A + +E F + +
Sbjct: 22 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE--FLNEASVMKGFT 79
Query: 487 HKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLD------------WAMR 534
+ V L+G + +P ++V E +G L +L E + M
Sbjct: 80 CHHVVRLLGVVSKGQP--TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMA 137
Query: 535 LRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN---TTAAKTGS 591
IA GMAY HRNL + + + D+ KI DF + T + G
Sbjct: 138 AEIADGMAYLN------AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGG 191
Query: 592 AAM--------ELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGE 643
+ E L+ S+++SFG +L+E+ SL + L E
Sbjct: 192 KGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEIT-----------SLAEQPYQGLSNE 240
Query: 644 QPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKE 692
Q LK ++D +N E + +++ C +P RP+ I LK+
Sbjct: 241 QVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKD 289
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 108/289 (37%), Gaps = 48/289 (16%)
Query: 431 IIGSFSDGTVGTVYKGT----LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN 486
++ G+ G VY+G + E V +V A + +E F + +
Sbjct: 21 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE--FLNEASVMKGFT 78
Query: 487 HKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLD------------WAMR 534
+ V L+G + +P ++V E +G L +L E + M
Sbjct: 79 CHHVVRLLGVVSKGQP--TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMA 136
Query: 535 LRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN---TTAAKTGS 591
IA GMAY HRNL + + + D+ KI DF + T + G
Sbjct: 137 AEIADGMAYLN------AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGG 190
Query: 592 AAM--------ELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGE 643
+ E L+ S+++SFG +L+E+ SL + L E
Sbjct: 191 KGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEIT-----------SLAEQPYQGLSNE 239
Query: 644 QPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKE 692
Q LK ++D +N E + +++ C +P RP+ I LK+
Sbjct: 240 QVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKD 288
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 93/216 (43%), Gaps = 36/216 (16%)
Query: 426 EDF--SNIIGSFSDGTVGTVYKG-TLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTL 482
EDF N++G G+ VY+ ++ +G+E+A+ + +A + + + + ++
Sbjct: 11 EDFKVGNLLGK---GSFAGVYRAESIHTGLEVAIKM--IDKKAMYKAGMVQRVQNEVKIH 65
Query: 483 SKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQ-------EAEHLDWAMRL 535
++ H + + L Y E+ +V E NG + +L + EA H
Sbjct: 66 CQLKHPSILELYNYFEDSNYV--YLVLEMCHNGEMNRYLKNRVKPFSENEARHFMH---- 119
Query: 536 RIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN---------TTA 586
+I GM Y H I HR+L S++ LT + KI+DF T
Sbjct: 120 QIITGMLYLHSH------GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLC 173
Query: 587 AKTGSAAMELLETSAVDLESNVYSFGTILFEMITGR 622
+ E+ SA LES+V+S G + + ++ GR
Sbjct: 174 GTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGR 209
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 97/218 (44%), Gaps = 30/218 (13%)
Query: 420 ELEAACEDFSNIIGSFSDGTVGTVYKGTLS--SGVEIAVTSTSVKSRADWSKNLESQFRK 477
E+EA+C +IG+ G G V G L E+ V ++K +++ F
Sbjct: 18 EIEASCITIERVIGA---GEFGEVCSGRLKLPGKRELPVAIKTLK--VGYTEKQRRDFLG 72
Query: 478 KIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEH--LDWAMRL 535
+ + + +H N ++L G + +P M+V EY NGSL L + + + L
Sbjct: 73 EASIMGQFDHPNIIHLEGVVTKSKPV--MIVTEYMENGSLDTFLKKNDGQFTVIQLVGML 130
Query: 536 R-IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFS----FWNNTTAAKT- 589
R I+ GM Y + + HR+L + +I + + K+SDF ++ AA T
Sbjct: 131 RGISAGMKYLSDMGY------VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 184
Query: 590 --GSAAMELLETSAVDLE-----SNVYSFGTILFEMIT 620
G + A+ S+V+S+G +++E+++
Sbjct: 185 RGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVS 222
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 30/218 (13%)
Query: 420 ELEAACEDFSNIIGSFSDGTVGTVYKGTLS--SGVEIAVTSTSVKSRADWSKNLESQFRK 477
EL+A ++G+ G G V G L S EI+V ++K +++ F
Sbjct: 41 ELDATNISIDKVVGA---GEFGEVCSGRLKLPSKKEISVAIKTLK--VGYTEKQRRDFLG 95
Query: 478 KIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEH--LDWAMRL 535
+ + + +H N + L G + +P M+V EY NGSL L +A+ + L
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPV--MIVTEYMENGSLDSFLRKHDAQFTVIQLVGML 153
Query: 536 R-IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFS----FWNNTTAAKT- 589
R IA GM Y + + HR+L + +I + + K+SDF ++ AA T
Sbjct: 154 RGIASGMKYLSDMGY------VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 207
Query: 590 --GSAAMELLETSAVDLE-----SNVYSFGTILFEMIT 620
G + A+ S+V+S+G +L+E+++
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 88/199 (44%), Gaps = 25/199 (12%)
Query: 437 DGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGY 496
+GT G VYK S G +A+ + + + + S ++I L +++H N V+LI
Sbjct: 31 EGTYGVVYKAKDSQGRIVALKRIRLDAE---DEGIPSTAIREISLLKELHHPNIVSLIDV 87
Query: 497 CEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRL---RIAMGMAYCLEHMHQLTP 553
+ T +VFE+ L + L + D +++ ++ G+A+C +H
Sbjct: 88 IHSERCLT--LVFEFM-EKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHR----- 139
Query: 554 PIAHRNLQSSSIYLTEDYAAKISDFSF----------WNNTTAAKTGSAAMELLETSAVD 603
I HR+L+ ++ + D A K++DF + + A L+ +
Sbjct: 140 -ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYS 198
Query: 604 LESNVYSFGTILFEMITGR 622
+++S G I EMITG+
Sbjct: 199 TSVDIWSIGCIFAEMITGK 217
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 97/218 (44%), Gaps = 30/218 (13%)
Query: 420 ELEAACEDFSNIIGSFSDGTVGTVYKGTLS--SGVEIAVTSTSVKSRADWSKNLESQFRK 477
EL+A ++G+ G G V G L S EI+V ++K +++ F
Sbjct: 41 ELDATNISIDKVVGA---GEFGEVCSGRLKLPSKKEISVAIKTLK--VGYTEKQRRDFLG 95
Query: 478 KIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEH--LDWAMRL 535
+ + + +H N + L G + +P M+V EY NGSL L +A+ + L
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPV--MIVTEYMENGSLDSFLRKHDAQFTVIQLVGML 153
Query: 536 R-IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFS----FWNNTTAAKT- 589
R IA GM Y L M HR+L + +I + + K+SDF ++ AA T
Sbjct: 154 RGIASGMKY-LSDMG-----FVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 207
Query: 590 --GSAAMELLETSAVDLE-----SNVYSFGTILFEMIT 620
G + A+ S+V+S+G +L+E+++
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 30/218 (13%)
Query: 420 ELEAACEDFSNIIGSFSDGTVGTVYKGTLS--SGVEIAVTSTSVKSRADWSKNLESQFRK 477
EL+A ++G+ G G V G L S EI+V ++K +++ F
Sbjct: 39 ELDATNISIDKVVGA---GEFGEVCSGRLKLPSKKEISVAIKTLK--VGYTEKQRRDFLG 93
Query: 478 KIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEH--LDWAMRL 535
+ + + +H N + L G + +P M+V EY NGSL L +A+ + L
Sbjct: 94 EASIMGQFDHPNIIRLEGVVTKSKPV--MIVTEYMENGSLDSFLRKHDAQFTVIQLVGML 151
Query: 536 R-IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFS----FWNNTTAAKT- 589
R IA GM Y + + HR+L + +I + + K+SDF ++ AA T
Sbjct: 152 RGIASGMKYLSDMGY------VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 205
Query: 590 --GSAAMELLETSAVDLE-----SNVYSFGTILFEMIT 620
G + A+ S+V+S+G +L+E+++
Sbjct: 206 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 243
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 30/218 (13%)
Query: 420 ELEAACEDFSNIIGSFSDGTVGTVYKGTLS--SGVEIAVTSTSVKSRADWSKNLESQFRK 477
EL+A ++G+ G G V G L S EI+V ++K +++ F
Sbjct: 29 ELDATNISIDKVVGA---GEFGEVCSGRLKLPSKKEISVAIKTLK--VGYTEKQRRDFLG 83
Query: 478 KIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEH--LDWAMRL 535
+ + + +H N + L G + +P M+V EY NGSL L +A+ + L
Sbjct: 84 EASIMGQFDHPNIIRLEGVVTKSKPV--MIVTEYMENGSLDSFLRKHDAQFTVIQLVGML 141
Query: 536 R-IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFS----FWNNTTAAKT- 589
R IA GM Y + + HR+L + +I + + K+SDF ++ AA T
Sbjct: 142 RGIASGMKYLSDMGY------VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 195
Query: 590 --GSAAMELLETSAVDLE-----SNVYSFGTILFEMIT 620
G + A+ S+V+S+G +L+E+++
Sbjct: 196 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 233
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 30/218 (13%)
Query: 420 ELEAACEDFSNIIGSFSDGTVGTVYKGTLS--SGVEIAVTSTSVKSRADWSKNLESQFRK 477
EL+A ++G+ G G V G L S EI+V ++K +++ F
Sbjct: 41 ELDATNISIDKVVGA---GEFGEVCSGRLKLPSKKEISVAIKTLK--VGYTEKQRRDFLG 95
Query: 478 KIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEH--LDWAMRL 535
+ + + +H N + L G + +P M+V EY NGSL L +A+ + L
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPV--MIVTEYMENGSLDSFLRKHDAQFTVIQLVGML 153
Query: 536 R-IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFS----FWNNTTAAKT- 589
R IA GM Y + + HR+L + +I + + K+SDF ++ AA T
Sbjct: 154 RGIASGMKYLSDMGY------VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 207
Query: 590 --GSAAMELLETSAVDLE-----SNVYSFGTILFEMIT 620
G + A+ S+V+S+G +L+E+++
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 30/218 (13%)
Query: 420 ELEAACEDFSNIIGSFSDGTVGTVYKGTLS--SGVEIAVTSTSVKSRADWSKNLESQFRK 477
EL+A ++G+ G G V G L S EI+V ++K +++ F
Sbjct: 41 ELDATNISIDKVVGA---GEFGEVCSGRLKLPSKKEISVAIKTLK--VGYTEKQRRDFLG 95
Query: 478 KIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEH--LDWAMRL 535
+ + + +H N + L G + +P M+V EY NGSL L +A+ + L
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPV--MIVTEYMENGSLDSFLRKHDAQFTVIQLVGML 153
Query: 536 R-IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFS----FWNNTTAAKT- 589
R IA GM Y + + HR+L + +I + + K+SDF ++ AA T
Sbjct: 154 RGIASGMKYLSDMGY------VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 207
Query: 590 --GSAAMELLETSAVDLE-----SNVYSFGTILFEMIT 620
G + A+ S+V+S+G +L+E+++
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 30/218 (13%)
Query: 420 ELEAACEDFSNIIGSFSDGTVGTVYKGTLS--SGVEIAVTSTSVKSRADWSKNLESQFRK 477
EL+A ++G+ G G V G L S EI+V ++K +++ F
Sbjct: 41 ELDATNISIDKVVGA---GEFGEVCSGRLKLPSKKEISVAIKTLK--VGYTEKQRRDFLG 95
Query: 478 KIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEH--LDWAMRL 535
+ + + +H N + L G + +P M+V EY NGSL L +A+ + L
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPV--MIVTEYMENGSLDSFLRKHDAQFTVIQLVGML 153
Query: 536 R-IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFS----FWNNTTAAKT- 589
R IA GM Y + + HR+L + +I + + K+SDF ++ AA T
Sbjct: 154 RGIASGMKYLSDMGY------VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 207
Query: 590 --GSAAMELLETSAVDLE-----SNVYSFGTILFEMIT 620
G + A+ S+V+S+G +L+E+++
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 88/199 (44%), Gaps = 25/199 (12%)
Query: 437 DGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGY 496
+GT G VYK S G +A+ + + + + S ++I L +++H N V+LI
Sbjct: 31 EGTYGVVYKAKDSQGRIVALKRIRLDAE---DEGIPSTAIREISLLKELHHPNIVSLIDV 87
Query: 497 CEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRL---RIAMGMAYCLEHMHQLTP 553
+ T +VFE+ L + L + D +++ ++ G+A+C +H
Sbjct: 88 IHSERCLT--LVFEFM-EKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHR----- 139
Query: 554 PIAHRNLQSSSIYLTEDYAAKISDFSF----------WNNTTAAKTGSAAMELLETSAVD 603
I HR+L+ ++ + D A K++DF + + A L+ +
Sbjct: 140 -ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYS 198
Query: 604 LESNVYSFGTILFEMITGR 622
+++S G I EMITG+
Sbjct: 199 TSVDIWSIGCIFAEMITGK 217
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 104/233 (44%), Gaps = 29/233 (12%)
Query: 464 RADWSKN--LESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRM--MVFEYSPNGSLFE 519
RAD +++ +FR++ + +NH V + E + P + +V EY +L +
Sbjct: 46 RADLARDPSFYLRFRREAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRD 105
Query: 520 HLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFS 579
+H + A+ + A H + I HR+++ ++I ++ A K+ DF
Sbjct: 106 IVHTEGPMTPKRAIEVIADACQALNFSHQNG----IIHRDVKPANIMISATNAVKVMDFG 161
Query: 580 FWN---------NTTAAKTGSA---AMELLETSAVDLESNVYSFGTILFEMITGRISYSI 627
TAA G+A + E +VD S+VYS G +L+E++TG ++
Sbjct: 162 IARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFT- 220
Query: 628 ENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQR 680
S + A ++++ +D + P+ + E + +L V+ + +P+ R
Sbjct: 221 -GDSPVSVAYQHVR-----EDPIPPSAR--HEGLSADLDAVVLKALAKNPENR 265
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 30/218 (13%)
Query: 420 ELEAACEDFSNIIGSFSDGTVGTVYKGTLS--SGVEIAVTSTSVKSRADWSKNLESQFRK 477
EL+A ++G+ G G V G L S EI+V ++K +++ F
Sbjct: 12 ELDATNISIDKVVGA---GEFGEVCSGRLKLPSKKEISVAIKTLK--VGYTEKQRRDFLG 66
Query: 478 KIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEH--LDWAMRL 535
+ + + +H N + L G + +P M+V EY NGSL L +A+ + L
Sbjct: 67 EASIMGQFDHPNIIRLEGVVTKSKPV--MIVTEYMENGSLDSFLRKHDAQFTVIQLVGML 124
Query: 536 R-IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFS----FWNNTTAAKT- 589
R IA GM Y + + HR+L + +I + + K+SDF ++ AA T
Sbjct: 125 RGIASGMKYLSDMGY------VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 178
Query: 590 --GSAAMELLETSAVDLE-----SNVYSFGTILFEMIT 620
G + A+ S+V+S+G +L+E+++
Sbjct: 179 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 90/208 (43%), Gaps = 30/208 (14%)
Query: 438 GTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGY 496
GT G V G +G ++AV + + S ++ + +++I L H + + L Y
Sbjct: 22 GTFGKVKIGEHQLTGHKVAVKI--LNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKL--Y 77
Query: 497 CEEDEPFTRMMVFEYSPNGSLFE----HLHIQEAEHLDWAMRL--RIAMGMAYCLEHMHQ 550
P MV EY G LF+ H ++E E A RL +I + YC HM
Sbjct: 78 QVISTPTDFFMVMEYVSGGELFDYICKHGRVEEME----ARRLFQQILSAVDYCHRHM-- 131
Query: 551 LTPPIAHRNLQSSSIYLTEDYAAKISDFSFWN--------NTTAAKTGSAAMELLETS-A 601
+ HR+L+ ++ L AKI+DF N T+ AA E++
Sbjct: 132 ----VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLY 187
Query: 602 VDLESNVYSFGTILFEMITGRISYSIEN 629
E +++S G IL+ ++ G + + E+
Sbjct: 188 AGPEVDIWSCGVILYALLCGTLPFDDEH 215
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 132/317 (41%), Gaps = 59/317 (18%)
Query: 411 TGVPKLKRSELEAACEDFSNIIGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVK-----SR 464
T +P ++ E F +G+ G G V + T G E AV +VK +
Sbjct: 33 TQLPYNEKWEFPRNNLQFGKTLGA---GAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAH 89
Query: 465 ADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQ 524
AD + L S+ K + L + H+N VNL+G C P +++ EY G L L +
Sbjct: 90 ADEKEALMSEL-KIMSHLGQ--HENIVNLLGACTHGGPV--LVITEYCCYGDLLNFLRRK 144
Query: 525 EAEHLDWA------------------MRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIY 566
L+++ ++A GMA+ + HR++ + ++
Sbjct: 145 RPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLA------SKNCIHRDVAARNVL 198
Query: 567 LTEDYAAKISDFSF----WNNTTAAKTGSA-------AMELLETSAVDLESNVYSFGTIL 615
LT + AKI DF N++ G+A A E + ++S+V+S+G +L
Sbjct: 199 LTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILL 258
Query: 616 FEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHP 675
+E+ + + + G L N S++ K + + P + + +++ C
Sbjct: 259 WEIFS--LGLNPYPGILVN--SKFYKLVKDGYQMAQPAFAP------KNIYSIMQACWAL 308
Query: 676 DPKQRPSMRGIAAKLKE 692
+P RP+ + I + L+E
Sbjct: 309 EPTHRPTFQQICSFLQE 325
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/289 (21%), Positives = 108/289 (37%), Gaps = 48/289 (16%)
Query: 431 IIGSFSDGTVGTVYKGT----LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN 486
++ G+ G VY+G + E V +V A + +E F + +
Sbjct: 21 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE--FLNEASVMKGFT 78
Query: 487 HKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLD------------WAMR 534
+ V L+G + +P ++V E +G L +L E + M
Sbjct: 79 CHHVVRLLGVVSKGQP--TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMA 136
Query: 535 LRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN---TTAAKTGS 591
IA GMAY HR+L + + + D+ KI DF + T + G
Sbjct: 137 AEIADGMAYLN------AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGG 190
Query: 592 AAM--------ELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGE 643
+ E L+ S+++SFG +L+E+ SL + L E
Sbjct: 191 KGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEIT-----------SLAEQPYQGLSNE 239
Query: 644 QPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKE 692
Q LK ++D +N E + +++ C +P RP+ I LK+
Sbjct: 240 QVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKD 288
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 104/233 (44%), Gaps = 29/233 (12%)
Query: 464 RADWSKN--LESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRM--MVFEYSPNGSLFE 519
RAD +++ +FR++ + +NH V + E + P + +V EY +L +
Sbjct: 46 RADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRD 105
Query: 520 HLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFS 579
+H + A+ + A H + I HR+++ ++I ++ A K+ DF
Sbjct: 106 IVHTEGPMTPKRAIEVIADACQALNFSHQNG----IIHRDVKPANIMISATNAVKVMDFG 161
Query: 580 FWN---------NTTAAKTGSA---AMELLETSAVDLESNVYSFGTILFEMITGRISYSI 627
TAA G+A + E +VD S+VYS G +L+E++TG ++
Sbjct: 162 IARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFT- 220
Query: 628 ENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQR 680
S + A ++++ +D + P+ + E + +L V+ + +P+ R
Sbjct: 221 -GDSPVSVAYQHVR-----EDPIPPSAR--HEGLSADLDAVVLKALAKNPENR 265
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 94/218 (43%), Gaps = 30/218 (13%)
Query: 420 ELEAACEDFSNIIGSFSDGTVGTVYKGTLS--SGVEIAVTSTSVKSRADWSKNLESQFRK 477
E++A+C +IG G G V G L EI V ++K A ++ F
Sbjct: 25 EIDASCIKIEKVIGV---GEFGEVCSGRLKVPGKREICVAIKTLK--AGYTDKQRRDFLS 79
Query: 478 KIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEH--LDWAMRL 535
+ + + +H N ++L G + +P M++ EY NGSL L + + L
Sbjct: 80 EASIMGQFDHPNIIHLEGVVTKCKPV--MIITEYMENGSLDAFLRKNDGRFTVIQLVGML 137
Query: 536 R-IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFS----FWNNTTAAKTG 590
R I GM Y L M + HR+L + +I + + K+SDF ++ AA T
Sbjct: 138 RGIGSGMKY-LSDMSAV-----HRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTT 191
Query: 591 SA--------AMELLETSAVDLESNVYSFGTILFEMIT 620
A E + S+V+S+G +++E+++
Sbjct: 192 RGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 229
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 110/268 (41%), Gaps = 43/268 (16%)
Query: 438 GTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYC 497
G+ TVYKG L + + V ++ R +K+ +F+++ + L + H N V
Sbjct: 37 GSFKTVYKG-LDTETTVEVAWCELQDRK-LTKSERQRFKEEAEXLKGLQHPNIVRFYDSW 94
Query: 498 EEDEPFTRMMVF--EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYC------LEHMH 549
E + +V E +G+L +L +I + ++C L+ +H
Sbjct: 95 ESTVKGKKCIVLVTELXTSGTL--------KTYLKRFKVXKIKVLRSWCRQILKGLQFLH 146
Query: 550 QLTPPIAHRNLQSSSIYLTEDYAA-KISDFSFWNNTTAAKTGSAAMELLET--------- 599
TPPI HR+L+ +I++T + KI D K S A ++ T
Sbjct: 147 TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGL----ATLKRASFAKAVIGTPEFXAPEXY 202
Query: 600 -SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 658
D +VY+FG E T YS +N A Y + + V P SF
Sbjct: 203 EEKYDESVDVYAFGXCXLEXATSEYPYS----ECQNAAQIYRR----VTSGVKPA--SFD 252
Query: 659 ENVLEELLVVIKNCVHPDPKQRPSMRGI 686
+ + E+ +I+ C+ + +R S++ +
Sbjct: 253 KVAIPEVKEIIEGCIRQNKDERYSIKDL 280
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 96/204 (47%), Gaps = 23/204 (11%)
Query: 431 IIGSFSDGTVGTVYKGTLSS-GVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKN 489
I+ G + TVY + +++A+ + + R + +F +++ S+++H+N
Sbjct: 15 IVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPRE--KEETLKRFEREVHNSSQLSHQN 72
Query: 490 FVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRL--RIAMGMAYCLEH 547
V++I EED+ + +V EY +L E++ +D A+ +I G ++H
Sbjct: 73 IVSMIDVDEEDDCY--YLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDG----IKH 126
Query: 548 MHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF---WNNTTAAKTGSA-------AMELL 597
H + I HR+++ +I + + KI DF + T+ +T + E
Sbjct: 127 AHDMR--IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQA 184
Query: 598 ETSAVDLESNVYSFGTILFEMITG 621
+ A D +++YS G +L+EM+ G
Sbjct: 185 KGEATDECTDIYSIGIVLYEMLVG 208
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 104/233 (44%), Gaps = 29/233 (12%)
Query: 464 RADWSKN--LESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRM--MVFEYSPNGSLFE 519
RAD +++ +FR++ + +NH V + E + P + +V EY +L +
Sbjct: 46 RADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRD 105
Query: 520 HLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFS 579
+H + A+ + A H + I HR+++ ++I ++ A K+ DF
Sbjct: 106 IVHTEGPMTPKRAIEVIADACQALNFSHQNG----IIHRDVKPANIMISATNAVKVMDFG 161
Query: 580 FWN---------NTTAAKTGSA---AMELLETSAVDLESNVYSFGTILFEMITGRISYSI 627
TAA G+A + E +VD S+VYS G +L+E++TG ++
Sbjct: 162 IARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFT- 220
Query: 628 ENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQR 680
S + A ++++ +D + P+ + E + +L V+ + +P+ R
Sbjct: 221 -GDSPVSVAYQHVR-----EDPIPPSAR--HEGLSADLDAVVLKALAKNPENR 265
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 94/218 (43%), Gaps = 30/218 (13%)
Query: 420 ELEAACEDFSNIIGSFSDGTVGTVYKGTLS--SGVEIAVTSTSVKSRADWSKNLESQFRK 477
E++A+C +IG G G V G L EI V ++K A ++ F
Sbjct: 10 EIDASCIKIEKVIGV---GEFGEVCSGRLKVPGKREICVAIKTLK--AGYTDKQRRDFLS 64
Query: 478 KIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEH--LDWAMRL 535
+ + + +H N ++L G + +P M++ EY NGSL L + + L
Sbjct: 65 EASIMGQFDHPNIIHLEGVVTKCKPV--MIITEYMENGSLDAFLRKNDGRFTVIQLVGML 122
Query: 536 R-IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFS----FWNNTTAAKTG 590
R I GM Y L M + HR+L + +I + + K+SDF ++ AA T
Sbjct: 123 RGIGSGMKY-LSDMSYV-----HRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTT 176
Query: 591 SA--------AMELLETSAVDLESNVYSFGTILFEMIT 620
A E + S+V+S+G +++E+++
Sbjct: 177 RGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 214
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 104/233 (44%), Gaps = 29/233 (12%)
Query: 464 RADWSKN--LESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRM--MVFEYSPNGSLFE 519
RAD +++ +FR++ + +NH V + E + P + +V EY +L +
Sbjct: 46 RADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRD 105
Query: 520 HLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFS 579
+H + A+ + A H + I HR+++ ++I ++ A K+ DF
Sbjct: 106 IVHTEGPMTPKRAIEVIADACQALNFSHQNG----IIHRDVKPANILISATNAVKVVDFG 161
Query: 580 FWN---------NTTAAKTGSA---AMELLETSAVDLESNVYSFGTILFEMITGRISYSI 627
TAA G+A + E +VD S+VYS G +L+E++TG ++
Sbjct: 162 IARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFT- 220
Query: 628 ENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQR 680
S + A ++++ +D + P+ + E + +L V+ + +P+ R
Sbjct: 221 -GDSPVSVAYQHVR-----EDPIPPSAR--HEGLSADLDAVVLKALAKNPENR 265
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 94/218 (43%), Gaps = 30/218 (13%)
Query: 420 ELEAACEDFSNIIGSFSDGTVGTVYKGTLS--SGVEIAVTSTSVKSRADWSKNLESQFRK 477
E++A+C +IG G G V G L EI V ++K A ++ F
Sbjct: 4 EIDASCIKIEKVIGV---GEFGEVCSGRLKVPGKREICVAIKTLK--AGYTDKQRRDFLS 58
Query: 478 KIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEH--LDWAMRL 535
+ + + +H N ++L G + +P M++ EY NGSL L + + L
Sbjct: 59 EASIMGQFDHPNIIHLEGVVTKCKPV--MIITEYMENGSLDAFLRKNDGRFTVIQLVGML 116
Query: 536 R-IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFS----FWNNTTAAKTG 590
R I GM Y L M + HR+L + +I + + K+SDF ++ AA T
Sbjct: 117 RGIGSGMKY-LSDMSYV-----HRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTT 170
Query: 591 SA--------AMELLETSAVDLESNVYSFGTILFEMIT 620
A E + S+V+S+G +++E+++
Sbjct: 171 RGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 208
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 134/310 (43%), Gaps = 47/310 (15%)
Query: 411 TGVPKLKRSELEAACEDFSNIIGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVK-----SR 464
T +P ++ E F +G+ G G V + T G E AV +VK +
Sbjct: 33 TQLPYNEKWEFPRNNLQFGKTLGA---GAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAH 89
Query: 465 ADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQ 524
AD + L S+ K + L + H+N VNL+G C P +++ EY G L L +
Sbjct: 90 ADEKEALMSEL-KIMSHLGQ--HENIVNLLGACTHGGPV--LVITEYCCYGDLLNFLR-R 143
Query: 525 EAEHLDWAMRLRIAMGMAYCLEHMH---QLTPPIA--------HRNLQSSSIYLTEDYAA 573
++ L+ IA A + +H Q+ +A HR++ + ++ LT + A
Sbjct: 144 KSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVA 203
Query: 574 KISDFSF----WNNTTAAKTGSA-------AMELLETSAVDLESNVYSFGTILFEMITGR 622
KI DF N++ G+A A E + ++S+V+S+G +L+E+ +
Sbjct: 204 KIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS-- 261
Query: 623 ISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPS 682
+ + G L N S++ K + + P + + +++ C +P RP+
Sbjct: 262 LGLNPYPGILVN--SKFYKLVKDGYQMAQPAFAP------KNIYSIMQACWALEPTHRPT 313
Query: 683 MRGIAAKLKE 692
+ I + L+E
Sbjct: 314 FQQICSFLQE 323
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 104/233 (44%), Gaps = 29/233 (12%)
Query: 464 RADWSKN--LESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRM--MVFEYSPNGSLFE 519
RAD +++ +FR++ + +NH V + E + P + +V EY +L +
Sbjct: 63 RADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRD 122
Query: 520 HLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFS 579
+H + A+ + A H + I HR+++ ++I ++ A K+ DF
Sbjct: 123 IVHTEGPMTPKRAIEVIADACQALNFSHQNG----IIHRDVKPANIMISATNAVKVMDFG 178
Query: 580 FWN---------NTTAAKTGSA---AMELLETSAVDLESNVYSFGTILFEMITGRISYSI 627
TAA G+A + E +VD S+VYS G +L+E++TG ++
Sbjct: 179 IARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFT- 237
Query: 628 ENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQR 680
S + A ++++ +D + P+ + E + +L V+ + +P+ R
Sbjct: 238 -GDSPVSVAYQHVR-----EDPIPPSAR--HEGLSADLDAVVLKALAKNPENR 282
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/269 (20%), Positives = 103/269 (38%), Gaps = 44/269 (16%)
Query: 438 GTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYC 497
G G K T E+ V ++ + + + F K++ + + H N + IG
Sbjct: 21 GCFGQAIKVTHRETGEVMVMKELIR----FDEETQRTFLKEVKVMRCLEHPNVLKFIGVL 76
Query: 498 EEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAH 557
+D+ + EY G+L + ++++ W+ R+ A +A + ++H + I H
Sbjct: 77 YKDKRLN--FITEYIKGGTLRGIIKSMDSQY-PWSQRVSFAKDIASGMAYLHSMN--IIH 131
Query: 558 RNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSAAM----------------------- 594
R+L S + + E+ ++DF KT +
Sbjct: 132 RDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAP 191
Query: 595 ELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTL 654
E++ + D + +V+SFG +L E+I GR+ N +YL V L
Sbjct: 192 EMINGRSYDEKVDVFSFGIVLCEII-GRV----------NADPDYLPRTMDFGLNVRGFL 240
Query: 655 KSF-QENVLEELLVVIKNCVHPDPKQRPS 682
+ N + C DP++RPS
Sbjct: 241 DRYCPPNCPPSFFPITVRCCDLDPEKRPS 269
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 88/205 (42%), Gaps = 30/205 (14%)
Query: 438 GTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGY 496
GT G V G +G ++AV + + S ++ + R++I L H + + L Y
Sbjct: 27 GTFGKVKVGKHELTGHKVAVKI--LNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKL--Y 82
Query: 497 CEEDEPFTRMMVFEYSPNGSLFEHL----HIQEAEHLDWAMRL--RIAMGMAYCLEHMHQ 550
P MV EY G LF+++ + E E + RL +I G+ YC HM
Sbjct: 83 QVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKE----SRRLFQQILSGVDYCHRHM-- 136
Query: 551 LTPPIAHRNLQSSSIYLTEDYAAKISDFSFWN--------NTTAAKTGSAAMELLETS-A 601
+ HR+L+ ++ L AKI+DF N + AA E++
Sbjct: 137 ----VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSCGSPNYAAPEVISGRLY 192
Query: 602 VDLESNVYSFGTILFEMITGRISYS 626
E +++S G IL+ ++ G + +
Sbjct: 193 AGPEVDIWSSGVILYALLCGTLPFD 217
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 90/211 (42%), Gaps = 34/211 (16%)
Query: 435 FSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKK-----IDTLSKVNHK 488
G GTVY +++G E+A+ NL+ Q +K+ I + + +
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQM----------NLQQQPKKELIINEILVMRENKNP 78
Query: 489 NFVN-LIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEH 547
N VN L Y DE + +V EY GSL + + +D + LE
Sbjct: 79 NIVNYLDSYLVGDELW---VVMEYLAGGSLTD---VVTETCMDEGQIAAVCRECLQALEF 132
Query: 548 MHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSAAM---------ELLE 598
+H + + HRN++S +I L D + K++DF F T ++ + M E++
Sbjct: 133 LH--SNQVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVT 190
Query: 599 TSAVDLESNVYSFGTILFEMITGRISYSIEN 629
A + +++S G + EMI G Y EN
Sbjct: 191 RKAYGPKVDIWSLGIMAIEMIEGEPPYLNEN 221
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 134/324 (41%), Gaps = 66/324 (20%)
Query: 411 TGVPKLKRSELEAACEDFSNIIGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVK-----SR 464
T +P ++ E F +G+ G G V + T G E AV +VK +
Sbjct: 18 TQLPYNEKWEFPRNNLQFGKTLGA---GAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAH 74
Query: 465 ADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHI- 523
AD + L S+ K + L + H+N VNL+G C P +++ EY G L L
Sbjct: 75 ADEKEALMSEL-KIMSHLGQ--HENIVNLLGACTHGGPV--LVITEYCCYGDLLNFLRRK 129
Query: 524 ------------QEAEHLD----WAMRLR--------IAMGMAYCLEHMHQLTPPIAHRN 559
Q+ E LD + LR +A GMA+ + HR+
Sbjct: 130 AEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLA------SKNCIHRD 183
Query: 560 LQSSSIYLTEDYAAKISDFSF----WNNTTAAKTGSA-------AMELLETSAVDLESNV 608
+ + ++ LT + AKI DF N++ G+A A E + ++S+V
Sbjct: 184 VAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDV 243
Query: 609 YSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVV 668
+S+G +L+E+ + + + G L N S++ K + + P + + +
Sbjct: 244 WSYGILLWEIFS--LGLNPYPGILVN--SKFYKLVKDGYQMAQPAFAP------KNIYSI 293
Query: 669 IKNCVHPDPKQRPSMRGIAAKLKE 692
++ C +P RP+ + I + L+E
Sbjct: 294 MQACWALEPTHRPTFQQICSFLQE 317
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 110/254 (43%), Gaps = 31/254 (12%)
Query: 428 FSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNH 487
F I+G S TV V L++ E A+ ++ R +N ++ D +S+++H
Sbjct: 36 FGKILGEGSFSTV--VLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 488 KNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEH 547
FV L ++DE Y+ NG L ++ I++ D + LE+
Sbjct: 92 PFFVKLYFTFQDDEKL--YFGLSYAKNGCLLKY--IRKIGSFDETCTRFYTAEIVSALEY 147
Query: 548 MHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWN-----------NTTAAKTGSAAMEL 596
+H I HR+L+ +I L ED +I+DF N+ + EL
Sbjct: 148 LH--GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPEL 205
Query: 597 LETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKS 656
L + S++++ G I+++++ G + N EYL ++ +K D K
Sbjct: 206 LTEKSASKSSDLWALGCIIYQLVAGLPPFRAGN--------EYLIFQKIIKLEYDFPEKF 257
Query: 657 FQE--NVLEELLVV 668
F + +++E+LLV+
Sbjct: 258 FPKARDLVEKLLVL 271
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 90/208 (43%), Gaps = 30/208 (14%)
Query: 438 GTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGY 496
GT G V G +G ++AV + + S ++ + +++I L H + + L Y
Sbjct: 22 GTFGKVKIGEHQLTGHKVAVKI--LNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKL--Y 77
Query: 497 CEEDEPFTRMMVFEYSPNGSLFE----HLHIQEAEHLDWAMRL--RIAMGMAYCLEHMHQ 550
P MV EY G LF+ H ++E E A RL +I + YC HM
Sbjct: 78 QVISTPTDFFMVMEYVSGGELFDYICKHGRVEEME----ARRLFQQILSAVDYCHRHM-- 131
Query: 551 LTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAK-----TGSAAMELLETSAVDL- 604
+ HR+L+ ++ L AKI+DF N + + GS E + L
Sbjct: 132 ----VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSCGSPNYAAPEVISGRLY 187
Query: 605 ---ESNVYSFGTILFEMITGRISYSIEN 629
E +++S G IL+ ++ G + + E+
Sbjct: 188 AGPEVDIWSCGVILYALLCGTLPFDDEH 215
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 99/242 (40%), Gaps = 45/242 (18%)
Query: 404 QLQKAFVTGVPKLKRSELEAACEDFSNIIGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVK 462
+L+ G PK K + E G GTVY +++G E+A+
Sbjct: 8 KLRSIVSVGDPKKKYTRFE-----------KIGQGASGTVYTAMDVATGQEVAIRQM--- 53
Query: 463 SRADWSKNLESQFRKK-----IDTLSKVNHKNFVN-LIGYCEEDEPFTRMMVFEYSPNGS 516
NL+ Q +K+ I + + + N VN L Y DE + +V EY GS
Sbjct: 54 -------NLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELW---VVMEYLAGGS 103
Query: 517 LFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKIS 576
L + + +D + LE +H + + HR+++S +I L D + K++
Sbjct: 104 LTD---VVTETCMDEGQIAAVCRECLQALEFLH--SNQVIHRDIKSDNILLGMDGSVKLT 158
Query: 577 DFSFWNNTTAAKTGSAAM---------ELLETSAVDLESNVYSFGTILFEMITGRISYSI 627
DF F T ++ + M E++ A + +++S G + EMI G Y
Sbjct: 159 DFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLN 218
Query: 628 EN 629
EN
Sbjct: 219 EN 220
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 99/242 (40%), Gaps = 45/242 (18%)
Query: 404 QLQKAFVTGVPKLKRSELEAACEDFSNIIGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVK 462
+L+ G PK K + E G GTVY +++G E+A+
Sbjct: 8 KLRSIVSVGDPKKKYTRFE-----------KIGQGASGTVYTAMDVATGQEVAIRQM--- 53
Query: 463 SRADWSKNLESQFRKK-----IDTLSKVNHKNFVN-LIGYCEEDEPFTRMMVFEYSPNGS 516
NL+ Q +K+ I + + + N VN L Y DE + +V EY GS
Sbjct: 54 -------NLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELW---VVMEYLAGGS 103
Query: 517 LFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKIS 576
L + + +D + LE +H + + HR+++S +I L D + K++
Sbjct: 104 LTD---VVTETCMDEGQIAAVCRECLQALEFLH--SNQVIHRDIKSDNILLGMDGSVKLT 158
Query: 577 DFSFWNNTTAAKTGSAAM---------ELLETSAVDLESNVYSFGTILFEMITGRISYSI 627
DF F T ++ + M E++ A + +++S G + EMI G Y
Sbjct: 159 DFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLN 218
Query: 628 EN 629
EN
Sbjct: 219 EN 220
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 87/220 (39%), Gaps = 27/220 (12%)
Query: 430 NIIGSFSDGTVGTVYKGTLS--SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNH 487
++ DG+ G V +G SG ++V +K F ++++ + ++H
Sbjct: 11 RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDH 70
Query: 488 KNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMR---LRIAMGMAYC 544
+N + L G P MV E +P GSL + L + L + +++A GM Y
Sbjct: 71 RNLIRLYGVVLT-PPMK--MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGY- 126
Query: 545 LEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW------------NNTTAAKTGSA 592
LE + HR+L + ++ L KI DF
Sbjct: 127 LE-----SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWC 181
Query: 593 AMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGS 631
A E L+T S+ + FG L+EM T G+ + NGS
Sbjct: 182 APESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS 221
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 99/242 (40%), Gaps = 45/242 (18%)
Query: 404 QLQKAFVTGVPKLKRSELEAACEDFSNIIGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVK 462
+L+ G PK K + E G GTVY +++G E+A+
Sbjct: 8 KLRSIVSVGDPKKKYTRFE-----------KIGQGASGTVYTAMDVATGQEVAIRQM--- 53
Query: 463 SRADWSKNLESQFRKK-----IDTLSKVNHKNFVN-LIGYCEEDEPFTRMMVFEYSPNGS 516
NL+ Q +K+ I + + + N VN L Y DE + +V EY GS
Sbjct: 54 -------NLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELW---VVMEYLAGGS 103
Query: 517 LFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKIS 576
L + + +D + LE +H + + HR+++S +I L D + K++
Sbjct: 104 LTD---VVTETCMDEGQIAAVCRECLQALEFLH--SNQVIHRDIKSDNILLGMDGSVKLT 158
Query: 577 DFSFWNNTTAAKTGSAAM---------ELLETSAVDLESNVYSFGTILFEMITGRISYSI 627
DF F T ++ + M E++ A + +++S G + EMI G Y
Sbjct: 159 DFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLN 218
Query: 628 EN 629
EN
Sbjct: 219 EN 220
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 65/301 (21%), Positives = 116/301 (38%), Gaps = 61/301 (20%)
Query: 420 ELEAACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKI 479
E+EA+ IIGS G G V G L + V +A +++ F +
Sbjct: 45 EIEASRIHIEKIIGS---GDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEA 101
Query: 480 DTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEH--LDWAMRLR- 536
+ + +H N + L G M+V EY NGSL L + + + LR
Sbjct: 102 SIMGQFDHPNIIRLEGVVTRGR--LAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRG 159
Query: 537 IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFS----FWNNTTAAKTGSA 592
+ GM Y + + HR+L + ++ + + K+SDF ++ AA T +
Sbjct: 160 VGAGMRYLSDLGY------VHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTG 213
Query: 593 --------AMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQ 644
A E + S+V+SFG +++E++ GE+
Sbjct: 214 GKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA--------------------YGER 253
Query: 645 PL-----KDIVDPTLKSFQ-------ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKE 692
P +D++ + ++ + L +L++ +C H D QRP I + L
Sbjct: 254 PYWNMTNRDVISSVEEGYRLPAPMGCPHALHQLML---DCWHKDRAQRPRFSQIVSVLDA 310
Query: 693 I 693
+
Sbjct: 311 L 311
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 99/242 (40%), Gaps = 45/242 (18%)
Query: 404 QLQKAFVTGVPKLKRSELEAACEDFSNIIGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVK 462
+L+ G PK K + E G GTVY +++G E+A+
Sbjct: 9 KLRSIVSVGDPKKKYTRFE-----------KIGQGASGTVYTAMDVATGQEVAIRQM--- 54
Query: 463 SRADWSKNLESQFRKK-----IDTLSKVNHKNFVN-LIGYCEEDEPFTRMMVFEYSPNGS 516
NL+ Q +K+ I + + + N VN L Y DE + +V EY GS
Sbjct: 55 -------NLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELW---VVMEYLAGGS 104
Query: 517 LFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKIS 576
L + + +D + LE +H + + HR+++S +I L D + K++
Sbjct: 105 LTD---VVTETCMDEGQIAAVCRECLQALEFLH--SNQVIHRDIKSDNILLGMDGSVKLT 159
Query: 577 DFSFWNNTTAAKTGSAAM---------ELLETSAVDLESNVYSFGTILFEMITGRISYSI 627
DF F T ++ + M E++ A + +++S G + EMI G Y
Sbjct: 160 DFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLN 219
Query: 628 EN 629
EN
Sbjct: 220 EN 221
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 91/210 (43%), Gaps = 38/210 (18%)
Query: 435 FSDGTVGTVYKG-TLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNL 493
+GT TVYKG ++GV +A+ + S + S ++I + ++ H+N V L
Sbjct: 13 LGNGTYATVYKGLNKTTGVYVALKEVKLDS----EEGTPSTAIREISLMKELKHENIVRL 68
Query: 494 IGYCEEDEPFTRMMVFEYSPN-----------GSLFEHLHIQEAEHLDWAMRLRIAMGMA 542
+ T +VFE+ N G+ L + ++ W ++ G+A
Sbjct: 69 YDVIHTENKLT--LVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQW----QLLQGLA 122
Query: 543 YCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWN------NTTAAKTGS----A 592
+C E+ I HR+L+ ++ + + K+ DF NT +++ + A
Sbjct: 123 FCHEN------KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRA 176
Query: 593 AMELLETSAVDLESNVYSFGTILFEMITGR 622
L+ + +++S G IL EMITG+
Sbjct: 177 PDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 97/218 (44%), Gaps = 30/218 (13%)
Query: 420 ELEAACEDFSNIIGSFSDGTVGTVYKGTLS--SGVEIAVTSTSVKSRADWSKNLESQFRK 477
EL+A ++G+ G G V G L S EI+V ++K +++ F
Sbjct: 41 ELDATNISIDKVVGA---GEFGEVCSGRLKLPSKKEISVAIKTLK--VGYTEKQRRDFLG 95
Query: 478 KIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEH--LDWAMRL 535
+ + + +H N + L G + +P M+V E NGSL L +A+ + L
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPV--MIVTEXMENGSLDSFLRKHDAQFTVIQLVGML 153
Query: 536 R-IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFS----FWNNTTAAKT- 589
R IA GM Y L M + HR+L + +I + + K+SDF ++ AA T
Sbjct: 154 RGIASGMKY-LSDMGAV-----HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 207
Query: 590 --GSAAMELLETSAVDLE-----SNVYSFGTILFEMIT 620
G + A+ S+V+S+G +L+E+++
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 65/301 (21%), Positives = 116/301 (38%), Gaps = 61/301 (20%)
Query: 420 ELEAACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKI 479
E+EA+ IIGS G G V G L + V +A +++ F +
Sbjct: 45 EIEASRIHIEKIIGS---GDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEA 101
Query: 480 DTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEH--LDWAMRLR- 536
+ + +H N + L G M+V EY NGSL L + + + LR
Sbjct: 102 SIMGQFDHPNIIRLEGVVTRGR--LAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRG 159
Query: 537 IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFS----FWNNTTAAKTGSA 592
+ GM Y + + HR+L + ++ + + K+SDF ++ AA T +
Sbjct: 160 VGAGMRYLSDLGY------VHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTG 213
Query: 593 --------AMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQ 644
A E + S+V+SFG +++E++ GE+
Sbjct: 214 GKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA--------------------YGER 253
Query: 645 PL-----KDIVDPTLKSFQ-------ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKE 692
P +D++ + ++ + L +L++ +C H D QRP I + L
Sbjct: 254 PYWNMTNRDVISSVEEGYRLPAPMGCPHALHQLML---DCWHKDRAQRPRFSQIVSVLDA 310
Query: 693 I 693
+
Sbjct: 311 L 311
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 87/220 (39%), Gaps = 27/220 (12%)
Query: 430 NIIGSFSDGTVGTVYKGTLS--SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNH 487
++ DG+ G V +G SG ++V +K F ++++ + ++H
Sbjct: 11 RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDH 70
Query: 488 KNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMR---LRIAMGMAYC 544
+N + L G P MV E +P GSL + L + L + +++A GM Y
Sbjct: 71 RNLIRLYGVVLT-PPMK--MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGY- 126
Query: 545 LEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW------------NNTTAAKTGSA 592
LE + HR+L + ++ L KI DF
Sbjct: 127 LE-----SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWC 181
Query: 593 AMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGS 631
A E L+T S+ + FG L+EM T G+ + NGS
Sbjct: 182 APESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS 221
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 87/220 (39%), Gaps = 27/220 (12%)
Query: 430 NIIGSFSDGTVGTVYKGTLS--SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNH 487
++ DG+ G V +G SG ++V +K F ++++ + ++H
Sbjct: 11 RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDH 70
Query: 488 KNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMR---LRIAMGMAYC 544
+N + L G P MV E +P GSL + L + L + +++A GM Y
Sbjct: 71 RNLIRLYGVVLT-PPMK--MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGY- 126
Query: 545 LEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW------------NNTTAAKTGSA 592
LE + HR+L + ++ L KI DF
Sbjct: 127 LE-----SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWC 181
Query: 593 AMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGS 631
A E L+T S+ + FG L+EM T G+ + NGS
Sbjct: 182 APESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS 221
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 87/220 (39%), Gaps = 27/220 (12%)
Query: 430 NIIGSFSDGTVGTVYKGTLS--SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNH 487
++ DG+ G V +G SG ++V +K F ++++ + ++H
Sbjct: 21 RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDH 80
Query: 488 KNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMR---LRIAMGMAYC 544
+N + L G P MV E +P GSL + L + L + +++A GM Y
Sbjct: 81 RNLIRLYGVVLT-PPMK--MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGY- 136
Query: 545 LEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW------------NNTTAAKTGSA 592
LE + HR+L + ++ L KI DF
Sbjct: 137 LE-----SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWC 191
Query: 593 AMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGS 631
A E L+T S+ + FG L+EM T G+ + NGS
Sbjct: 192 APESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS 231
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 87/220 (39%), Gaps = 27/220 (12%)
Query: 430 NIIGSFSDGTVGTVYKGTLS--SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNH 487
++ DG+ G V +G SG ++V +K F ++++ + ++H
Sbjct: 21 RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDH 80
Query: 488 KNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMR---LRIAMGMAYC 544
+N + L G P MV E +P GSL + L + L + +++A GM Y
Sbjct: 81 RNLIRLYGVVLT-PPMK--MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGY- 136
Query: 545 LEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW------------NNTTAAKTGSA 592
LE + HR+L + ++ L KI DF
Sbjct: 137 LE-----SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWC 191
Query: 593 AMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGS 631
A E L+T S+ + FG L+EM T G+ + NGS
Sbjct: 192 APESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS 231
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 87/220 (39%), Gaps = 27/220 (12%)
Query: 430 NIIGSFSDGTVGTVYKGTLS--SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNH 487
++ DG+ G V +G SG ++V +K F ++++ + ++H
Sbjct: 15 RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDH 74
Query: 488 KNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMR---LRIAMGMAYC 544
+N + L G P MV E +P GSL + L + L + +++A GM Y
Sbjct: 75 RNLIRLYGVVLT-PPMK--MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGY- 130
Query: 545 LEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW------------NNTTAAKTGSA 592
LE + HR+L + ++ L KI DF
Sbjct: 131 LE-----SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWC 185
Query: 593 AMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGS 631
A E L+T S+ + FG L+EM T G+ + NGS
Sbjct: 186 APESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS 225
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 63/151 (41%), Gaps = 24/151 (15%)
Query: 545 LEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKT---------GSAAME 595
LEH+HQ I +R+L+ ++ L +D +ISD A +T G A E
Sbjct: 302 LEHLHQRN--IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPE 359
Query: 596 LLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLK--DIVDPT 653
LL D + ++ G L+EMI R + +EN + EQ + D P
Sbjct: 360 LLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPA 419
Query: 654 LKSFQENVLEELLVVIKNCVHPDPKQRPSMR 684
K F E +L++ DP++R R
Sbjct: 420 SKDFCEALLQK-----------DPEKRLGFR 439
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 110/254 (43%), Gaps = 31/254 (12%)
Query: 428 FSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNH 487
F I+G S TV V L++ E A+ ++ R +N ++ D +S+++H
Sbjct: 37 FGKILGEGSFSTV--VLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 488 KNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEH 547
FV L ++DE Y+ NG L ++ I++ D + LE+
Sbjct: 93 PFFVKLYFTFQDDEKL--YFGLSYAKNGELLKY--IRKIGSFDETCTRFYTAEIVSALEY 148
Query: 548 MHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWN-----------NTTAAKTGSAAMEL 596
+H I HR+L+ +I L ED +I+DF N+ + EL
Sbjct: 149 LH--GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPEL 206
Query: 597 LETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKS 656
L + S++++ G I+++++ G + N EYL ++ +K D K
Sbjct: 207 LTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN--------EYLIFQKIIKLEYDFPEKF 258
Query: 657 FQE--NVLEELLVV 668
F + +++E+LLV+
Sbjct: 259 FPKARDLVEKLLVL 272
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 96/218 (44%), Gaps = 30/218 (13%)
Query: 420 ELEAACEDFSNIIGSFSDGTVGTVYKGTLS--SGVEIAVTSTSVKSRADWSKNLESQFRK 477
EL+A ++G+ G G V G L S EI+V ++K +++ F
Sbjct: 41 ELDATNISIDKVVGA---GEFGEVCSGRLKLPSKKEISVAIKTLK--VGYTEKQRRDFLG 95
Query: 478 KIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEH--LDWAMRL 535
+ + + +H N + L G + +P M+V E NGSL L +A+ + L
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPV--MIVTEXMENGSLDSFLRKHDAQFTVIQLVGML 153
Query: 536 R-IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFS----FWNNTTAAKT- 589
R IA GM Y + + HR+L + +I + + K+SDF ++ AA T
Sbjct: 154 RGIASGMKYLSDMGY------VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 207
Query: 590 --GSAAMELLETSAVDLE-----SNVYSFGTILFEMIT 620
G + A+ S+V+S+G +L+E+++
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 63/151 (41%), Gaps = 24/151 (15%)
Query: 545 LEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKT---------GSAAME 595
LEH+HQ I +R+L+ ++ L +D +ISD A +T G A E
Sbjct: 302 LEHLHQRN--IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPE 359
Query: 596 LLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLK--DIVDPT 653
LL D + ++ G L+EMI R + +EN + EQ + D P
Sbjct: 360 LLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPA 419
Query: 654 LKSFQENVLEELLVVIKNCVHPDPKQRPSMR 684
K F E +L++ DP++R R
Sbjct: 420 SKDFCEALLQK-----------DPEKRLGFR 439
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 87/220 (39%), Gaps = 27/220 (12%)
Query: 430 NIIGSFSDGTVGTVYKGTLS--SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNH 487
++ DG+ G V +G SG ++V +K F ++++ + ++H
Sbjct: 15 RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDH 74
Query: 488 KNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMR---LRIAMGMAYC 544
+N + L G P MV E +P GSL + L + L + +++A GM Y
Sbjct: 75 RNLIRLYGVVLT-PPMK--MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGY- 130
Query: 545 LEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW------------NNTTAAKTGSA 592
LE + HR+L + ++ L KI DF
Sbjct: 131 LE-----SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWC 185
Query: 593 AMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGS 631
A E L+T S+ + FG L+EM T G+ + NGS
Sbjct: 186 APESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS 225
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 63/151 (41%), Gaps = 24/151 (15%)
Query: 545 LEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKT---------GSAAME 595
LEH+HQ I +R+L+ ++ L +D +ISD A +T G A E
Sbjct: 302 LEHLHQRN--IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPE 359
Query: 596 LLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLK--DIVDPT 653
LL D + ++ G L+EMI R + +EN + EQ + D P
Sbjct: 360 LLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPA 419
Query: 654 LKSFQENVLEELLVVIKNCVHPDPKQRPSMR 684
K F E +L++ DP++R R
Sbjct: 420 SKDFCEALLQK-----------DPEKRLGFR 439
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 109/254 (42%), Gaps = 31/254 (12%)
Query: 428 FSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNH 487
F I+G S TV V L++ E A+ ++ R +N ++ D +S+++H
Sbjct: 14 FGKILGEGSFSTV--VLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRLDH 69
Query: 488 KNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEH 547
FV L ++DE Y+ NG L ++ I++ D + LE+
Sbjct: 70 PFFVKLYFTFQDDEKL--YFGLSYAKNGELLKY--IRKIGSFDETCTRFYTAEIVSALEY 125
Query: 548 MHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWN-----------NTTAAKTGSAAMEL 596
+H I HR+L+ +I L ED +I+DF N + EL
Sbjct: 126 LHGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 183
Query: 597 LETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKS 656
L + S++++ G I+++++ G + N EYL ++ +K D K
Sbjct: 184 LTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN--------EYLIFQKIIKLEYDFPEKF 235
Query: 657 FQE--NVLEELLVV 668
F + +++E+LLV+
Sbjct: 236 FPKARDLVEKLLVL 249
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 63/151 (41%), Gaps = 24/151 (15%)
Query: 545 LEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKT---------GSAAME 595
LEH+HQ I +R+L+ ++ L +D +ISD A +T G A E
Sbjct: 302 LEHLHQRN--IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPE 359
Query: 596 LLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLK--DIVDPT 653
LL D + ++ G L+EMI R + +EN + EQ + D P
Sbjct: 360 LLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPA 419
Query: 654 LKSFQENVLEELLVVIKNCVHPDPKQRPSMR 684
K F E +L++ DP++R R
Sbjct: 420 SKDFCEALLQK-----------DPEKRLGFR 439
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 131/315 (41%), Gaps = 57/315 (18%)
Query: 411 TGVPKLKRSELEAACEDFSNIIGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVK-----SR 464
T +P ++ E F +G+ G G V + T G E AV +VK +
Sbjct: 33 TQLPYNEKWEFPRNNLQFGKTLGA---GAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAH 89
Query: 465 ADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQ 524
AD + L S+ K + L + H+N VNL+G C P +++ EY G L L +
Sbjct: 90 ADEKEALMSEL-KIMSHLGQ--HENIVNLLGACTHGGPV--LVITEYCCYGDLLNFLRRK 144
Query: 525 -EAEHLDWAMRL---------------RIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLT 568
D A + ++A GMA+ + HR++ + ++ LT
Sbjct: 145 SRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLA------SKNCIHRDVAARNVLLT 198
Query: 569 EDYAAKISDFSF----WNNTTAAKTGSA-------AMELLETSAVDLESNVYSFGTILFE 617
+ AKI DF N++ G+A A E + ++S+V+S+G +L+E
Sbjct: 199 NGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWE 258
Query: 618 MITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDP 677
+ + + + G L N S++ K + + P + + +++ C +P
Sbjct: 259 IFS--LGLNPYPGILVN--SKFYKLVKDGYQMAQPAFAP------KNIYSIMQACWALEP 308
Query: 678 KQRPSMRGIAAKLKE 692
RP+ + I + L+E
Sbjct: 309 THRPTFQQICSFLQE 323
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 96/218 (44%), Gaps = 30/218 (13%)
Query: 420 ELEAACEDFSNIIGSFSDGTVGTVYKGTLS--SGVEIAVTSTSVKSRADWSKNLESQFRK 477
EL+A ++G+ G G V G L S EI+V ++K +++ F
Sbjct: 12 ELDATNISIDKVVGA---GEFGEVCSGRLKLPSKKEISVAIKTLK--VGYTEKQRRDFLG 66
Query: 478 KIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEH--LDWAMRL 535
+ + + +H N + L G + +P M+V E NGSL L +A+ + L
Sbjct: 67 EASIMGQFDHPNIIRLEGVVTKSKPV--MIVTEXMENGSLDSFLRKHDAQFTVIQLVGML 124
Query: 536 R-IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFS----FWNNTTAAKT- 589
R IA GM Y + + HR+L + +I + + K+SDF ++ AA T
Sbjct: 125 RGIASGMKYLSDMGY------VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 178
Query: 590 --GSAAMELLETSAVDLE-----SNVYSFGTILFEMIT 620
G + A+ S+V+S+G +L+E+++
Sbjct: 179 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 109/254 (42%), Gaps = 31/254 (12%)
Query: 428 FSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNH 487
F I+G S TV V L++ E A+ ++ R +N ++ D +S+++H
Sbjct: 36 FGKILGEGSFSTV--VLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 488 KNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEH 547
FV L ++DE Y+ NG L ++ I++ D + LE+
Sbjct: 92 PFFVKLYFTFQDDEKL--YFGLSYAKNGELLKY--IRKIGSFDETCTRFYTAEIVSALEY 147
Query: 548 MHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWN-----------NTTAAKTGSAAMEL 596
+H I HR+L+ +I L ED +I+DF N + EL
Sbjct: 148 LH--GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 205
Query: 597 LETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKS 656
L + S++++ G I+++++ G + N EYL ++ +K D K
Sbjct: 206 LTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN--------EYLIFQKIIKLEYDFPEKF 257
Query: 657 FQE--NVLEELLVV 668
F + +++E+LLV+
Sbjct: 258 FPKARDLVEKLLVL 271
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 102/226 (45%), Gaps = 34/226 (15%)
Query: 474 QFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQE--AEHLDW 531
+ + +I+ L + H++ L E MV EY P G LF+++ Q+ +E
Sbjct: 54 RIKTEIEALKNLRHQHICQLYHVLETANKI--FMVLEYCPGGELFDYIISQDRLSEEETR 111
Query: 532 AMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF----------SFW 581
+ +I +AY +H + AHR+L+ ++ E + K+ DF +
Sbjct: 112 VVFRQIVSAVAY----VH--SQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYH 165
Query: 582 NNTTAAKTGSAAMELLE-TSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYL 640
T AA EL++ S + E++V+S G +L+ ++ G + + +N + + +
Sbjct: 166 LQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDN--VMALYKKIM 223
Query: 641 KGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGI 686
+G+ + + P+ +++++ + DPK+R SM+ +
Sbjct: 224 RGKYDVPKWLSPS-----------SILLLQQMLQVDPKKRISMKNL 258
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 109/254 (42%), Gaps = 31/254 (12%)
Query: 428 FSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNH 487
F I+G S TV V L++ E A+ ++ R +N ++ D +S+++H
Sbjct: 36 FGKILGEGSFSTV--VLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 488 KNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEH 547
FV L ++DE Y+ NG L ++ I++ D + LE+
Sbjct: 92 PFFVKLYFTFQDDEKL--YFGLSYAKNGELLKY--IRKIGSFDETCTRFYTAEIVSALEY 147
Query: 548 MHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWN-----------NTTAAKTGSAAMEL 596
+H I HR+L+ +I L ED +I+DF N + EL
Sbjct: 148 LH--GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 205
Query: 597 LETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKS 656
L + S++++ G I+++++ G + N EYL ++ +K D K
Sbjct: 206 LTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN--------EYLIFQKIIKLEYDFPEKF 257
Query: 657 FQE--NVLEELLVV 668
F + +++E+LLV+
Sbjct: 258 FPKARDLVEKLLVL 271
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 109/254 (42%), Gaps = 31/254 (12%)
Query: 428 FSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNH 487
F I+G S TV V L++ E A+ ++ R +N ++ D +S+++H
Sbjct: 37 FGKILGEGSFSTV--VLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 488 KNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEH 547
FV L ++DE Y+ NG L ++ I++ D + LE+
Sbjct: 93 PFFVKLYFTFQDDEKL--YFGLSYAKNGELLKY--IRKIGSFDETCTRFYTAEIVSALEY 148
Query: 548 MHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWN-----------NTTAAKTGSAAMEL 596
+H I HR+L+ +I L ED +I+DF N + EL
Sbjct: 149 LH--GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 206
Query: 597 LETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKS 656
L + S++++ G I+++++ G + N EYL ++ +K D K
Sbjct: 207 LTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN--------EYLIFQKIIKLEYDFPEKF 258
Query: 657 FQE--NVLEELLVV 668
F + +++E+LLV+
Sbjct: 259 FPKARDLVEKLLVL 272
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 89/211 (42%), Gaps = 22/211 (10%)
Query: 435 FSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLI 494
G GTV KG + + + L+ + + + + ++++ V +I
Sbjct: 377 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 436
Query: 495 GYCEEDEPFTRMMVFEYSP-NGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTP 553
G CE + M + E P N L ++ H+++ ++ + +++MGM Y E
Sbjct: 437 GICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIE--LVHQVSMGMKYLEESN----- 489
Query: 554 PIAHRNLQSSSIYLTEDYAAKISDFSFWN------NTTAAKTGSA------AMELLETSA 601
HR+L + ++ L + AKISDF N A+T A E +
Sbjct: 490 -FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 548
Query: 602 VDLESNVYSFGTILFEMIT-GRISYSIENGS 631
+S+V+SFG +++E + G+ Y GS
Sbjct: 549 FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS 579
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 109/254 (42%), Gaps = 31/254 (12%)
Query: 428 FSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNH 487
F I+G S TV V L++ E A+ ++ R +N ++ D +S+++H
Sbjct: 34 FGKILGEGSFSTV--VLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 488 KNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEH 547
FV L ++DE Y+ NG L ++ I++ D + LE+
Sbjct: 90 PFFVKLYFTFQDDEKL--YFGLSYAKNGELLKY--IRKIGSFDETCTRFYTAEIVSALEY 145
Query: 548 MHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWN-----------NTTAAKTGSAAMEL 596
+H I HR+L+ +I L ED +I+DF N + EL
Sbjct: 146 LH--GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPEL 203
Query: 597 LETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKS 656
L + S++++ G I+++++ G + N EYL ++ +K D K
Sbjct: 204 LTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN--------EYLIFQKIIKLEYDFPEKF 255
Query: 657 FQE--NVLEELLVV 668
F + +++E+LLV+
Sbjct: 256 FPKARDLVEKLLVL 269
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 109/254 (42%), Gaps = 31/254 (12%)
Query: 428 FSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNH 487
F I+G S TV V L++ E A+ ++ R +N ++ D +S+++H
Sbjct: 11 FGKILGEGSFSTV--VLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRLDH 66
Query: 488 KNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEH 547
FV L ++DE Y+ NG L ++ I++ D + LE+
Sbjct: 67 PFFVKLYFTFQDDEKL--YFGLSYAKNGELLKY--IRKIGSFDETCTRFYTAEIVSALEY 122
Query: 548 MHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWN-----------NTTAAKTGSAAMEL 596
+H I HR+L+ +I L ED +I+DF N + EL
Sbjct: 123 LH--GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 180
Query: 597 LETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKS 656
L + S++++ G I+++++ G + N EYL ++ +K D K
Sbjct: 181 LTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN--------EYLIFQKIIKLEYDFPEKF 232
Query: 657 FQE--NVLEELLVV 668
F + +++E+LLV+
Sbjct: 233 FPKARDLVEKLLVL 246
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 110/254 (43%), Gaps = 31/254 (12%)
Query: 428 FSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNH 487
F I+G S TV V L++ E A+ ++ R +N ++ D +S+++H
Sbjct: 33 FGKILGEGSFSTV--VLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 488 KNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEH 547
FV L ++DE Y+ NG L ++ I++ D + LE+
Sbjct: 89 PFFVKLYFTFQDDEKL--YFGLSYAKNGELLKY--IRKIGSFDETCTRFYTAEIVSALEY 144
Query: 548 MHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWN-----------NTTAAKTGSAAMEL 596
+H I HR+L+ +I L ED +I+DF N+ + EL
Sbjct: 145 LH--GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPEL 202
Query: 597 LETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKS 656
L + S++++ G I+++++ G + N EYL ++ +K D K
Sbjct: 203 LTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN--------EYLIFQKIIKLEYDFPEKF 254
Query: 657 FQE--NVLEELLVV 668
F + +++E+LLV+
Sbjct: 255 FPKARDLVEKLLVL 268
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 109/254 (42%), Gaps = 31/254 (12%)
Query: 428 FSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNH 487
F I+G S TV V L++ E A+ ++ R +N ++ D +S+++H
Sbjct: 12 FGKILGEGSFSTV--VLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRLDH 67
Query: 488 KNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEH 547
FV L ++DE Y+ NG L ++ I++ D + LE+
Sbjct: 68 PFFVKLYFTFQDDEKL--YFGLSYAKNGELLKY--IRKIGSFDETCTRFYTAEIVSALEY 123
Query: 548 MHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWN-----------NTTAAKTGSAAMEL 596
+H I HR+L+ +I L ED +I+DF N + EL
Sbjct: 124 LH--GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 181
Query: 597 LETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKS 656
L + S++++ G I+++++ G + N EYL ++ +K D K
Sbjct: 182 LTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN--------EYLIFQKIIKLEYDFPEKF 233
Query: 657 FQE--NVLEELLVV 668
F + +++E+LLV+
Sbjct: 234 FPKARDLVEKLLVL 247
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 109/254 (42%), Gaps = 31/254 (12%)
Query: 428 FSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNH 487
F I+G S TV V L++ E A+ ++ R +N ++ D +S+++H
Sbjct: 34 FGKILGEGSFSTV--VLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 488 KNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEH 547
FV L ++DE Y+ NG L ++ I++ D + LE+
Sbjct: 90 PFFVKLYFTFQDDEKL--YFGLSYAKNGELLKY--IRKIGSFDETCTRFYTAEIVSALEY 145
Query: 548 MHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWN-----------NTTAAKTGSAAMEL 596
+H I HR+L+ +I L ED +I+DF N + EL
Sbjct: 146 LH--GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 203
Query: 597 LETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKS 656
L + S++++ G I+++++ G + N EYL ++ +K D K
Sbjct: 204 LTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN--------EYLIFQKIIKLEYDFPEKF 255
Query: 657 FQE--NVLEELLVV 668
F + +++E+LLV+
Sbjct: 256 FPKARDLVEKLLVL 269
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 109/254 (42%), Gaps = 31/254 (12%)
Query: 428 FSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNH 487
F I+G S TV V L++ E A+ ++ R +N ++ D +S+++H
Sbjct: 36 FGKILGEGSFSTV--VLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 488 KNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEH 547
FV L ++DE Y+ NG L ++ I++ D + LE+
Sbjct: 92 PFFVKLYFTFQDDEKL--YFGLSYAKNGELLKY--IRKIGSFDETCTRFYTAEIVSALEY 147
Query: 548 MHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWN-----------NTTAAKTGSAAMEL 596
+H I HR+L+ +I L ED +I+DF N + EL
Sbjct: 148 LH--GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 205
Query: 597 LETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKS 656
L + S++++ G I+++++ G + N EYL ++ +K D K
Sbjct: 206 LTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN--------EYLIFQKIIKLEYDFPEKF 257
Query: 657 FQE--NVLEELLVV 668
F + +++E+LLV+
Sbjct: 258 FPKARDLVEKLLVL 271
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 109/254 (42%), Gaps = 31/254 (12%)
Query: 428 FSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNH 487
F I+G S TV V L++ E A+ ++ R +N ++ D +S+++H
Sbjct: 41 FGKILGEGSFSTV--VLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 488 KNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEH 547
FV L ++DE Y+ NG L ++ I++ D + LE+
Sbjct: 97 PFFVKLYFCFQDDEKL--YFGLSYAKNGELLKY--IRKIGSFDETCTRFYTAEIVSALEY 152
Query: 548 MHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWN-----------NTTAAKTGSAAMEL 596
+H I HR+L+ +I L ED +I+DF N + EL
Sbjct: 153 LH--GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 210
Query: 597 LETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKS 656
L + S++++ G I+++++ G + N EYL ++ +K D K
Sbjct: 211 LTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN--------EYLIFQKIIKLEYDFPEKF 262
Query: 657 FQE--NVLEELLVV 668
F + +++E+LLV+
Sbjct: 263 FPKARDLVEKLLVL 276
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 109/254 (42%), Gaps = 31/254 (12%)
Query: 428 FSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNH 487
F I+G S TV V L++ E A+ ++ R +N ++ D +S+++H
Sbjct: 34 FGKILGEGSFSTV--VLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 488 KNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEH 547
FV L ++DE Y+ NG L ++ I++ D + LE+
Sbjct: 90 PFFVKLYFTFQDDEKL--YFGLSYAKNGELLKY--IRKIGSFDETCTRFYTAEIVSALEY 145
Query: 548 MHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWN-----------NTTAAKTGSAAMEL 596
+H I HR+L+ +I L ED +I+DF N + EL
Sbjct: 146 LH--GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 203
Query: 597 LETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKS 656
L + S++++ G I+++++ G + N EYL ++ +K D K
Sbjct: 204 LTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN--------EYLIFQKIIKLEYDFPEKF 255
Query: 657 FQE--NVLEELLVV 668
F + +++E+LLV+
Sbjct: 256 FPKARDLVEKLLVL 269
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 109/254 (42%), Gaps = 31/254 (12%)
Query: 428 FSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNH 487
F I+G S TV V L++ E A+ ++ R +N ++ D +S+++H
Sbjct: 13 FGKILGEGSFSTV--VLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRLDH 68
Query: 488 KNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEH 547
FV L ++DE Y+ NG L ++ I++ D + LE+
Sbjct: 69 PFFVKLYFTFQDDEKL--YFGLSYAKNGELLKY--IRKIGSFDETCTRFYTAEIVSALEY 124
Query: 548 MHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWN-----------NTTAAKTGSAAMEL 596
+H I HR+L+ +I L ED +I+DF N + EL
Sbjct: 125 LH--GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 182
Query: 597 LETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKS 656
L + S++++ G I+++++ G + N EYL ++ +K D K
Sbjct: 183 LTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN--------EYLIFQKIIKLEYDFPEKF 234
Query: 657 FQE--NVLEELLVV 668
F + +++E+LLV+
Sbjct: 235 FPKARDLVEKLLVL 248
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 109/254 (42%), Gaps = 31/254 (12%)
Query: 428 FSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNH 487
F I+G S T TV L++ E A+ ++ R +N ++ D +S+++H
Sbjct: 34 FGKILGEGSFST--TVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 488 KNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEH 547
FV L ++DE Y+ NG L ++ I++ D + LE+
Sbjct: 90 PFFVKLYFTFQDDEKL--YFGLSYAKNGELLKY--IRKIGSFDETCTRFYTAEIVSALEY 145
Query: 548 MHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWN-----------NTTAAKTGSAAMEL 596
+H I HR+L+ +I L ED +I+DF N + EL
Sbjct: 146 LH--GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 203
Query: 597 LETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKS 656
L + S++++ G I+++++ G + N EYL ++ +K D K
Sbjct: 204 LTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN--------EYLIFQKIIKLEYDFPEKF 255
Query: 657 FQE--NVLEELLVV 668
F + +++E+LLV+
Sbjct: 256 FPKARDLVEKLLVL 269
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 87/206 (42%), Gaps = 30/206 (14%)
Query: 432 IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFV 491
IG +G+ G V+K +I ++S D ++ ++I L ++ H N V
Sbjct: 8 IGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDD--PVIKKIALREIRMLKQLKHPNLV 65
Query: 492 NLIGYCEEDEPFTRM----MVFEYSPNGSLFEHLHIQEA--EHLDWAMRLRIAMGMAYCL 545
NL+ E F R +VFEY + L E Q EHL ++ + + +C
Sbjct: 66 NLL------EVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCH 119
Query: 546 EHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF----------WNNTTAAKTGSAAME 595
+H HR+++ +I +T+ K+ DF F +++ A + +
Sbjct: 120 KHN------CIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPEL 173
Query: 596 LLETSAVDLESNVYSFGTILFEMITG 621
L+ + +V++ G + E+++G
Sbjct: 174 LVGDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 89/211 (42%), Gaps = 22/211 (10%)
Query: 435 FSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLI 494
G GTV KG + + + L+ + + + + ++++ V +I
Sbjct: 378 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 437
Query: 495 GYCEEDEPFTRMMVFEYSP-NGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTP 553
G CE + M + E P N L ++ H+++ ++ + +++MGM Y E
Sbjct: 438 GICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIE--LVHQVSMGMKYLEESN----- 490
Query: 554 PIAHRNLQSSSIYLTEDYAAKISDFSFWN------NTTAAKTGSA------AMELLETSA 601
HR+L + ++ L + AKISDF N A+T A E +
Sbjct: 491 -FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 549
Query: 602 VDLESNVYSFGTILFEMIT-GRISYSIENGS 631
+S+V+SFG +++E + G+ Y GS
Sbjct: 550 FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS 580
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 116/295 (39%), Gaps = 58/295 (19%)
Query: 435 FSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNL 493
+G+ G V T+ SSG +AV ++ + + E F + + + H+N V +
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ----QRRELLFNEVV-IMRDYQHENVVEM 86
Query: 494 I-GYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLT 552
Y DE + M E + H + E + IA A CL + L+
Sbjct: 87 YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQ---------IA---AVCLAVLQALS 134
Query: 553 ----PPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT------AAKTGSA---AMELLET 599
+ HR+++S SI LT D K+SDF F + G+ A EL+
Sbjct: 135 VLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISR 194
Query: 600 SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ- 658
E +++S G ++ EM+ G Y + LK + ++D + P LK+
Sbjct: 195 LPYGPEVDIWSLGIMVIEMVDGEPPY---------FNEPPLKAMKMIRDNLPPRLKNLHK 245
Query: 659 -----ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPDGATPKLSPL 708
+ L+ LLV + P+ R AA+L + + G + PL
Sbjct: 246 VSPSLKGFLDRLLV-----------RDPAQRATAAELLKHPFLAKAGPPASIVPL 289
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 90/216 (41%), Gaps = 21/216 (9%)
Query: 428 FSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNH 487
F I+G S TV V L++ E A+ ++ R +N ++ D +S+++H
Sbjct: 36 FGKILGEGSFSTV--VLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 488 KNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEH 547
FV L ++DE Y+ NG L ++ I++ D + LE+
Sbjct: 92 PFFVKLYFTFQDDEKL--YFGLSYAKNGELLKY--IRKIGSFDETCTRFYTAEIVSALEY 147
Query: 548 MHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWN-----------NTTAAKTGSAAMEL 596
+H I HR+L+ +I L ED +I+DF N + EL
Sbjct: 148 LH--GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 205
Query: 597 LETSAVDLESNVYSFGTILFEMITGRISYSIENGSL 632
L + S++++ G I+++++ G + N L
Sbjct: 206 LTEKSAXKSSDLWALGCIIYQLVAGLPPFRAGNEGL 241
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 116/295 (39%), Gaps = 58/295 (19%)
Query: 435 FSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNL 493
+G+ G V T+ SSG +AV ++ + + E F + + + H+N V +
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ----QRRELLFNEVV-IMRDYQHENVVEM 93
Query: 494 I-GYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLT 552
Y DE + M E + H + E + IA A CL + L+
Sbjct: 94 YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQ---------IA---AVCLAVLQALS 141
Query: 553 ----PPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT------AAKTGSA---AMELLET 599
+ HR+++S SI LT D K+SDF F + G+ A EL+
Sbjct: 142 VLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISR 201
Query: 600 SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ- 658
E +++S G ++ EM+ G Y + LK + ++D + P LK+
Sbjct: 202 LPYGPEVDIWSLGIMVIEMVDGEPPY---------FNEPPLKAMKMIRDNLPPRLKNLHK 252
Query: 659 -----ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPDGATPKLSPL 708
+ L+ LLV + P+ R AA+L + + G + PL
Sbjct: 253 VSPSLKGFLDRLLV-----------RDPAQRATAAELLKHPFLAKAGPPASIVPL 296
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 109/254 (42%), Gaps = 31/254 (12%)
Query: 428 FSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNH 487
F I+G S TV V L++ E A+ ++ R +N ++ D +S+++H
Sbjct: 18 FGKILGEGSFSTV--VLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRLDH 73
Query: 488 KNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEH 547
FV L ++DE Y+ NG L ++ I++ D + LE+
Sbjct: 74 PFFVKLYFTFQDDEKL--YFGLSYAKNGELLKY--IRKIGSFDETCTRFYTAEIVSALEY 129
Query: 548 MHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWN-----------NTTAAKTGSAAMEL 596
+H I HR+L+ +I L ED +I+DF N + EL
Sbjct: 130 LH--GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 187
Query: 597 LETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKS 656
L + S++++ G I+++++ G + N EYL ++ +K D K
Sbjct: 188 LTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN--------EYLIFQKIIKLEYDFPEKF 239
Query: 657 FQE--NVLEELLVV 668
F + +++E+LLV+
Sbjct: 240 FPKARDLVEKLLVL 253
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 116/295 (39%), Gaps = 58/295 (19%)
Query: 435 FSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNL 493
+G+ G V T+ SSG +AV ++ + + E F + + + H+N V +
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ----QRRELLFNEVV-IMRDYQHENVVEM 91
Query: 494 I-GYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLT 552
Y DE + M E + H + E + IA A CL + L+
Sbjct: 92 YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQ---------IA---AVCLAVLQALS 139
Query: 553 ----PPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT------AAKTGSA---AMELLET 599
+ HR+++S SI LT D K+SDF F + G+ A EL+
Sbjct: 140 VLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISR 199
Query: 600 SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ- 658
E +++S G ++ EM+ G Y + LK + ++D + P LK+
Sbjct: 200 LPYGPEVDIWSLGIMVIEMVDGEPPY---------FNEPPLKAMKMIRDNLPPRLKNLHK 250
Query: 659 -----ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPDGATPKLSPL 708
+ L+ LLV + P+ R AA+L + + G + PL
Sbjct: 251 VSPSLKGFLDRLLV-----------RDPAQRATAAELLKHPFLAKAGPPASIVPL 294
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 89/208 (42%), Gaps = 22/208 (10%)
Query: 438 GTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYC 497
G GTV KG + + + L+ + + + + ++++ V +IG C
Sbjct: 22 GNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC 81
Query: 498 EEDEPFTRMMVFEYSP-NGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIA 556
E + M + E P N L ++ H+++ ++ + +++MGM Y E
Sbjct: 82 EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIE--LVHQVSMGMKYLEE------SNFV 133
Query: 557 HRNLQSSSIYLTEDYAAKISDFSFWN------NTTAAKTGSA------AMELLETSAVDL 604
HR+L + ++ L + AKISDF N A+T A E +
Sbjct: 134 HRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYYKFSS 193
Query: 605 ESNVYSFGTILFEMIT-GRISYSIENGS 631
+S+V+SFG +++E + G+ Y GS
Sbjct: 194 KSDVWSFGVLMWEAFSYGQKPYRGMKGS 221
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 116/295 (39%), Gaps = 58/295 (19%)
Query: 435 FSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNL 493
+G+ G V T+ SSG +AV ++ + + E F + + + H+N V +
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ----QRRELLFNEVV-IMRDYQHENVVEM 82
Query: 494 I-GYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLT 552
Y DE + M E + H + E + IA A CL + L+
Sbjct: 83 YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQ---------IA---AVCLAVLQALS 130
Query: 553 ----PPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT------AAKTGSA---AMELLET 599
+ HR+++S SI LT D K+SDF F + G+ A EL+
Sbjct: 131 VLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISR 190
Query: 600 SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ- 658
E +++S G ++ EM+ G Y + LK + ++D + P LK+
Sbjct: 191 LPYGPEVDIWSLGIMVIEMVDGEPPY---------FNEPPLKAMKMIRDNLPPRLKNLHK 241
Query: 659 -----ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPDGATPKLSPL 708
+ L+ LLV + P+ R AA+L + + G + PL
Sbjct: 242 VSPSLKGFLDRLLV-----------RDPAQRATAAELLKHPFLAKAGPPASIVPL 285
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 109/254 (42%), Gaps = 31/254 (12%)
Query: 428 FSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNH 487
F I+G S TV V L++ E A+ ++ R +N ++ D +S+++H
Sbjct: 33 FGKILGEGSFSTV--VLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 488 KNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEH 547
FV L ++DE Y+ NG L ++ I++ D + LE+
Sbjct: 89 PFFVKLYFTFQDDEKL--YFGLSYAKNGELLKY--IRKIGSFDETCTRFYTAEIVSALEY 144
Query: 548 MHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWN-----------NTTAAKTGSAAMEL 596
+H I HR+L+ +I L ED +I+DF N + EL
Sbjct: 145 LH--GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 202
Query: 597 LETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKS 656
L + S++++ G I+++++ G + N EYL ++ +K D K
Sbjct: 203 LTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN--------EYLIFQKIIKLEYDFPEKF 254
Query: 657 FQE--NVLEELLVV 668
F + +++E+LLV+
Sbjct: 255 FPKARDLVEKLLVL 268
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 90/208 (43%), Gaps = 22/208 (10%)
Query: 438 GTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYC 497
G GTV KG + + + L+ + + + + ++++ V +IG C
Sbjct: 36 GNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC 95
Query: 498 EEDEPFTRMMVFEYSP-NGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIA 556
E + M + E P N L ++ H+++ ++ + +++MGM Y E
Sbjct: 96 EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIE--LVHQVSMGMKYLEE------SNFV 147
Query: 557 HRNLQSSSIYLTEDYAAKISDF----------SFWNNTTAAK--TGSAAMELLETSAVDL 604
HR+L + ++ L + AKISDF +++ T K A E +
Sbjct: 148 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSS 207
Query: 605 ESNVYSFGTILFEMIT-GRISYSIENGS 631
+S+V+SFG +++E + G+ Y GS
Sbjct: 208 KSDVWSFGVLMWEAFSYGQKPYRGMKGS 235
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 90/208 (43%), Gaps = 22/208 (10%)
Query: 438 GTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYC 497
G GTV KG + + + L+ + + + + ++++ V +IG C
Sbjct: 22 GNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC 81
Query: 498 EEDEPFTRMMVFEYSP-NGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIA 556
E + M + E P N L ++ H+++ ++ + +++MGM Y E
Sbjct: 82 EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIE--LVHQVSMGMKYLEE------SNFV 133
Query: 557 HRNLQSSSIYLTEDYAAKISDF----------SFWNNTTAAK--TGSAAMELLETSAVDL 604
HR+L + ++ L + AKISDF +++ T K A E +
Sbjct: 134 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSS 193
Query: 605 ESNVYSFGTILFEMIT-GRISYSIENGS 631
+S+V+SFG +++E + G+ Y GS
Sbjct: 194 KSDVWSFGVLMWEAFSYGQKPYRGMKGS 221
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 90/208 (43%), Gaps = 22/208 (10%)
Query: 438 GTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYC 497
G GTV KG + + + L+ + + + + ++++ V +IG C
Sbjct: 16 GNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC 75
Query: 498 EEDEPFTRMMVFEYSP-NGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIA 556
E + M + E P N L ++ H+++ ++ + +++MGM Y E
Sbjct: 76 EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIE--LVHQVSMGMKYLEE------SNFV 127
Query: 557 HRNLQSSSIYLTEDYAAKISDF----------SFWNNTTAAK--TGSAAMELLETSAVDL 604
HR+L + ++ L + AKISDF +++ T K A E +
Sbjct: 128 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSS 187
Query: 605 ESNVYSFGTILFEMIT-GRISYSIENGS 631
+S+V+SFG +++E + G+ Y GS
Sbjct: 188 KSDVWSFGVLMWEAFSYGQKPYRGMKGS 215
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 90/208 (43%), Gaps = 22/208 (10%)
Query: 438 GTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYC 497
G GTV KG + + + L+ + + + + ++++ V +IG C
Sbjct: 28 GNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC 87
Query: 498 EEDEPFTRMMVFEYSP-NGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIA 556
E + M + E P N L ++ H+++ ++ + +++MGM Y E
Sbjct: 88 EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIE--LVHQVSMGMKYLEE------SNFV 139
Query: 557 HRNLQSSSIYLTEDYAAKISDF----------SFWNNTTAAK--TGSAAMELLETSAVDL 604
HR+L + ++ L + AKISDF +++ T K A E +
Sbjct: 140 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSS 199
Query: 605 ESNVYSFGTILFEMIT-GRISYSIENGS 631
+S+V+SFG +++E + G+ Y GS
Sbjct: 200 KSDVWSFGVLMWEAFSYGQKPYRGMKGS 227
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 105/236 (44%), Gaps = 17/236 (7%)
Query: 400 GLSGQLQKAFVTGVPKLKRSELEAACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTST 459
G G +++ +T K + + + + ++G S G V V K + S ++
Sbjct: 1 GAMGSIKEIAITHHVKEGHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKV 60
Query: 460 SVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFE 519
K+ + ++ + D L +VNH F+ + Y + E ++ ++ G LF
Sbjct: 61 LKKATLKVRDRVRTKMER--DILVEVNHP-FIVKLHYAFQTEG-KLYLILDFLRGGDLFT 116
Query: 520 HLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFS 579
L +E + ++ +A +A L+H+H L I +R+L+ +I L E+ K++DF
Sbjct: 117 RLS-KEVMFTEEDVKFYLA-ELALALDHLHSLG--IIYRDLKPENILLDEEGHIKLTDFG 172
Query: 580 F----WNNTTAAKTGSAAMELLETSAVDLESNV-----YSFGTILFEMITGRISYS 626
++ A + +E + V+ + +SFG ++FEM+TG + +
Sbjct: 173 LSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQ 228
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 116/295 (39%), Gaps = 58/295 (19%)
Query: 435 FSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNL 493
+G+ G V T+ SSG +AV ++ + + E F + + + H+N V +
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ----QRRELLFNEVV-IMRDYQHENVVEM 136
Query: 494 I-GYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLT 552
Y DE + M E + H + E + IA A CL + L+
Sbjct: 137 YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQ---------IA---AVCLAVLQALS 184
Query: 553 ----PPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT------AAKTGSA---AMELLET 599
+ HR+++S SI LT D K+SDF F + G+ A EL+
Sbjct: 185 VLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISR 244
Query: 600 SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ- 658
E +++S G ++ EM+ G Y + LK + ++D + P LK+
Sbjct: 245 LPYGPEVDIWSLGIMVIEMVDGEPPY---------FNEPPLKAMKMIRDNLPPRLKNLHK 295
Query: 659 -----ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPDGATPKLSPL 708
+ L+ LLV + P+ R AA+L + + G + PL
Sbjct: 296 VSPSLKGFLDRLLV-----------RDPAQRATAAELLKHPFLAKAGPPASIVPL 339
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 90/208 (43%), Gaps = 22/208 (10%)
Query: 438 GTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYC 497
G GTV KG + + + L+ + + + + ++++ V +IG C
Sbjct: 18 GNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC 77
Query: 498 EEDEPFTRMMVFEYSP-NGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIA 556
E + M + E P N L ++ H+++ ++ + +++MGM Y E
Sbjct: 78 EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIE--LVHQVSMGMKYLEE------SNFV 129
Query: 557 HRNLQSSSIYLTEDYAAKISDF----------SFWNNTTAAK--TGSAAMELLETSAVDL 604
HR+L + ++ L + AKISDF +++ T K A E +
Sbjct: 130 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSS 189
Query: 605 ESNVYSFGTILFEMIT-GRISYSIENGS 631
+S+V+SFG +++E + G+ Y GS
Sbjct: 190 KSDVWSFGVLMWEAFSYGQKPYRGMKGS 217
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 90/208 (43%), Gaps = 22/208 (10%)
Query: 438 GTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYC 497
G GTV KG + + + L+ + + + + ++++ V +IG C
Sbjct: 38 GNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC 97
Query: 498 EEDEPFTRMMVFEYSP-NGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIA 556
E + M + E P N L ++ H+++ ++ + +++MGM Y E
Sbjct: 98 EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIE--LVHQVSMGMKYLEES------NFV 149
Query: 557 HRNLQSSSIYLTEDYAAKISDF----------SFWNNTTAAK--TGSAAMELLETSAVDL 604
HR+L + ++ L + AKISDF +++ T K A E +
Sbjct: 150 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSS 209
Query: 605 ESNVYSFGTILFEMIT-GRISYSIENGS 631
+S+V+SFG +++E + G+ Y GS
Sbjct: 210 KSDVWSFGVLMWEAFSYGQKPYRGMKGS 237
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 90/208 (43%), Gaps = 22/208 (10%)
Query: 438 GTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYC 497
G GTV KG + + + L+ + + + + ++++ V +IG C
Sbjct: 38 GNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC 97
Query: 498 EEDEPFTRMMVFEYSP-NGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIA 556
E + M + E P N L ++ H+++ ++ + +++MGM Y E
Sbjct: 98 EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIE--LVHQVSMGMKYLEES------NFV 149
Query: 557 HRNLQSSSIYLTEDYAAKISDF----------SFWNNTTAAK--TGSAAMELLETSAVDL 604
HR+L + ++ L + AKISDF +++ T K A E +
Sbjct: 150 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSS 209
Query: 605 ESNVYSFGTILFEMIT-GRISYSIENGS 631
+S+V+SFG +++E + G+ Y GS
Sbjct: 210 KSDVWSFGVLMWEAFSYGQKPYRGMKGS 237
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 120/265 (45%), Gaps = 56/265 (21%)
Query: 434 SFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNL 493
S G G V++G G E+AV S + W + E I + H+N +
Sbjct: 16 SIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAE------IYQTVMLRHENILGF 68
Query: 494 IGYCEEDE-PFTRM-MVFEYSPNGSLFEHL--HIQEAEHLDWAMRLRIAMGMAYCLEHMH 549
I +D +T++ +V +Y +GSLF++L + E + +++A+ A L H+H
Sbjct: 69 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLH 123
Query: 550 ------QLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAA----------KTGSA- 592
Q P IAHR+L+S +I + ++ I+D +A + G+
Sbjct: 124 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR 183
Query: 593 --AMELLETSAVDLE-------SNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGE 643
A E+L+ S ++++ +++Y+ G + +E I R S G E++ +
Sbjct: 184 YMAPEVLDDS-INMKHFESFKRADIYAMGLVFWE-IARRCSI---GGIHEDY-------Q 231
Query: 644 QPLKDIV--DPTLKSFQENVLEELL 666
P D+V DP+++ ++ V E+ L
Sbjct: 232 LPYYDLVPSDPSVEEMRKVVCEQKL 256
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 90/216 (41%), Gaps = 21/216 (9%)
Query: 428 FSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNH 487
F I+G S TV V L++ E A+ ++ R +N ++ D +S+++H
Sbjct: 36 FGKILGEGSFSTV--VLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 488 KNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEH 547
FV L ++DE Y+ NG L ++ I++ D + LE+
Sbjct: 92 PFFVKLYFTFQDDEKL--YFGLSYAKNGELLKY--IRKIGSFDETCTRFYTAEIVSALEY 147
Query: 548 MHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWN-----------NTTAAKTGSAAMEL 596
+H I HR+L+ +I L ED +I+DF N + EL
Sbjct: 148 LH--GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 205
Query: 597 LETSAVDLESNVYSFGTILFEMITGRISYSIENGSL 632
L + S++++ G I+++++ G + N L
Sbjct: 206 LTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGL 241
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 116/287 (40%), Gaps = 47/287 (16%)
Query: 435 FSDGTVGTVYKGTLSS--GVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVN 492
+G G VY+G ++ G +I V + K D + + + +F + + ++H + V
Sbjct: 16 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKK--DCTLDNKEKFMSEAVIMKNLDHPHIVK 73
Query: 493 LIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMR-LRIAMGMAYCLEHMHQL 551
LIG EE+ + M ++ Y G E + + L + L+I MAY LE ++
Sbjct: 74 LIGIIEEEPTWIIMELYPYGELGHYLER-NKNSLKVLTLVLYSLQICKAMAY-LESIN-- 129
Query: 552 TPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSAAMELLETSAVDLE------ 605
HR++ +I + K+ DF A++ L + E
Sbjct: 130 ---CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRR 186
Query: 606 ----SNVYSFGTILFEMIT--GRISYSIEN----GSLENWASEYLKGEQ-PLKDIVDPTL 654
S+V+ F ++E+++ + + +EN G LE KG++ P D+ P L
Sbjct: 187 FTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLE-------KGDRLPKPDLCPPVL 239
Query: 655 KSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPDGA 701
+ ++ C DP RP + L ++ ME D A
Sbjct: 240 YT-----------LMTRCWDYDPSDRPRFTELVCSLSDVYQMEKDIA 275
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 120/265 (45%), Gaps = 56/265 (21%)
Query: 434 SFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNL 493
S G G V++G G E+AV S + W + E I + H+N +
Sbjct: 11 SIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAE------IYQTVMLRHENILGF 63
Query: 494 IGYCEEDE-PFTRM-MVFEYSPNGSLFEHL--HIQEAEHLDWAMRLRIAMGMAYCLEHMH 549
I +D +T++ +V +Y +GSLF++L + E + +++A+ A L H+H
Sbjct: 64 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLH 118
Query: 550 ------QLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAA----------KTGSA- 592
Q P IAHR+L+S +I + ++ I+D +A + G+
Sbjct: 119 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR 178
Query: 593 --AMELLETSAVDLE-------SNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGE 643
A E+L+ S ++++ +++Y+ G + +E I R S G E++ +
Sbjct: 179 YMAPEVLDDS-INMKHFESFKRADIYAMGLVFWE-IARRCSI---GGIHEDY-------Q 226
Query: 644 QPLKDIV--DPTLKSFQENVLEELL 666
P D+V DP+++ ++ V E+ L
Sbjct: 227 LPYYDLVPSDPSVEEMRKVVCEQKL 251
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 87/205 (42%), Gaps = 21/205 (10%)
Query: 428 FSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNH 487
F I+G S TV V L++ E A+ ++ R +N ++ D +S+++H
Sbjct: 39 FGKILGEGSFSTV--VLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRLDH 94
Query: 488 KNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEH 547
FV L ++DE Y+ NG L ++ I++ D + LE+
Sbjct: 95 PFFVKLYFTFQDDEKL--YFGLSYAKNGELLKY--IRKIGSFDETCTRFYTAEIVSALEY 150
Query: 548 MHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWN-----------NTTAAKTGSAAMEL 596
+H I HR+L+ +I L ED +I+DF N + EL
Sbjct: 151 LH--GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 208
Query: 597 LETSAVDLESNVYSFGTILFEMITG 621
L + S++++ G I+++++ G
Sbjct: 209 LTEKSACKSSDLWALGCIIYQLVAG 233
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 73/157 (46%), Gaps = 22/157 (14%)
Query: 434 SFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNL 493
S G G V++G G E+AV S + W + E I + H+N +
Sbjct: 13 SIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAE------IYQTVMLRHENILGF 65
Query: 494 IGYCEEDE-PFTRM-MVFEYSPNGSLFEHL--HIQEAEHLDWAMRLRIAMGMAYCLEHMH 549
I +D +T++ +V +Y +GSLF++L + E + +++A+ A L H+H
Sbjct: 66 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLH 120
Query: 550 ------QLTPPIAHRNLQSSSIYLTEDYAAKISDFSF 580
Q P IAHR+L+S +I + ++ I+D
Sbjct: 121 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL 157
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 116/287 (40%), Gaps = 47/287 (16%)
Query: 435 FSDGTVGTVYKGTLSS--GVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVN 492
+G G VY+G ++ G +I V + K D + + + +F + + ++H + V
Sbjct: 32 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKK--DCTLDNKEKFMSEAVIMKNLDHPHIVK 89
Query: 493 LIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAM-RLRIAMGMAYCLEHMHQL 551
LIG EE+ + M ++ Y G E + + L + L+I MAY LE ++
Sbjct: 90 LIGIIEEEPTWIIMELYPYGELGHYLER-NKNSLKVLTLVLYSLQICKAMAY-LESIN-- 145
Query: 552 TPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSAAMELLETSAVDLE------ 605
HR++ +I + K+ DF A++ L + E
Sbjct: 146 ---CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRR 202
Query: 606 ----SNVYSFGTILFEMIT--GRISYSIEN----GSLENWASEYLKGEQ-PLKDIVDPTL 654
S+V+ F ++E+++ + + +EN G LE KG++ P D+ P L
Sbjct: 203 FTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLE-------KGDRLPKPDLCPPVL 255
Query: 655 KSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPDGA 701
+ ++ C DP RP + L ++ ME D A
Sbjct: 256 YT-----------LMTRCWDYDPSDRPRFTELVCSLSDVYQMEKDIA 291
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 120/265 (45%), Gaps = 56/265 (21%)
Query: 434 SFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNL 493
S G G V++G G E+AV S + W + E I + H+N +
Sbjct: 10 SIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAE------IYQTVMLRHENILGF 62
Query: 494 IGYCEEDE-PFTRM-MVFEYSPNGSLFEHL--HIQEAEHLDWAMRLRIAMGMAYCLEHMH 549
I +D +T++ +V +Y +GSLF++L + E + +++A+ A L H+H
Sbjct: 63 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLH 117
Query: 550 ------QLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAA----------KTGSA- 592
Q P IAHR+L+S +I + ++ I+D +A + G+
Sbjct: 118 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR 177
Query: 593 --AMELLETSAVDLE-------SNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGE 643
A E+L+ S ++++ +++Y+ G + +E I R S G E++ +
Sbjct: 178 YMAPEVLDDS-INMKHFESFKRADIYAMGLVFWE-IARRCSI---GGIHEDY-------Q 225
Query: 644 QPLKDIV--DPTLKSFQENVLEELL 666
P D+V DP+++ ++ V E+ L
Sbjct: 226 LPYYDLVPSDPSVEEMRKVVCEQKL 250
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 73/157 (46%), Gaps = 22/157 (14%)
Query: 434 SFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNL 493
S G G V++G G E+AV S + W + E I + H+N +
Sbjct: 36 SIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAE------IYQTVMLRHENILGF 88
Query: 494 IGYCEEDE-PFTRM-MVFEYSPNGSLFEHL--HIQEAEHLDWAMRLRIAMGMAYCLEHMH 549
I +D +T++ +V +Y +GSLF++L + E + +++A+ A L H+H
Sbjct: 89 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLH 143
Query: 550 ------QLTPPIAHRNLQSSSIYLTEDYAAKISDFSF 580
Q P IAHR+L+S +I + ++ I+D
Sbjct: 144 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL 180
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 105/235 (44%), Gaps = 17/235 (7%)
Query: 401 LSGQLQKAFVTGVPKLKRSELEAACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTS 460
+ G +++ +T K + + + + ++G S G V V K + S ++
Sbjct: 1 MEGSIKEIAITHHVKEGHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVL 60
Query: 461 VKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEH 520
K+ + ++ + D L +VNH F+ + Y + E ++ ++ G LF
Sbjct: 61 KKATLKVRDRVRTKMER--DILVEVNHP-FIVKLHYAFQTEG-KLYLILDFLRGGDLFTR 116
Query: 521 LHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF 580
L +E + ++ +A +A L+H+H L I +R+L+ +I L E+ K++DF
Sbjct: 117 LS-KEVMFTEEDVKFYLA-ELALALDHLHSLG--IIYRDLKPENILLDEEGHIKLTDFGL 172
Query: 581 ----WNNTTAAKTGSAAMELLETSAVDLESNV-----YSFGTILFEMITGRISYS 626
++ A + +E + V+ + +SFG ++FEM+TG + +
Sbjct: 173 SKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQ 227
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 116/287 (40%), Gaps = 47/287 (16%)
Query: 435 FSDGTVGTVYKGTLSS--GVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVN 492
+G G VY+G ++ G +I V + K D + + + +F + + ++H + V
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKK--DCTLDNKEKFMSEAVIMKNLDHPHIVK 77
Query: 493 LIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAM-RLRIAMGMAYCLEHMHQL 551
LIG EE+ + M ++ Y G E + + L + L+I MAY LE ++
Sbjct: 78 LIGIIEEEPTWIIMELYPYGELGHYLER-NKNSLKVLTLVLYSLQICKAMAY-LESIN-- 133
Query: 552 TPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSAAMELLETSAVDLE------ 605
HR++ +I + K+ DF A++ L + E
Sbjct: 134 ---CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRR 190
Query: 606 ----SNVYSFGTILFEMIT--GRISYSIEN----GSLENWASEYLKGEQ-PLKDIVDPTL 654
S+V+ F ++E+++ + + +EN G LE KG++ P D+ P L
Sbjct: 191 FTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLE-------KGDRLPKPDLCPPVL 243
Query: 655 KSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPDGA 701
+ ++ C DP RP + L ++ ME D A
Sbjct: 244 YT-----------LMTRCWDYDPSDRPRFTELVCSLSDVYQMEKDIA 279
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 73/157 (46%), Gaps = 22/157 (14%)
Query: 434 SFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNL 493
S G G V++G G E+AV S + W + E I + H+N +
Sbjct: 49 SIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAE------IYQTVMLRHENILGF 101
Query: 494 IGYCEEDE-PFTRM-MVFEYSPNGSLFEHL--HIQEAEHLDWAMRLRIAMGMAYCLEHMH 549
I +D +T++ +V +Y +GSLF++L + E + +++A+ A L H+H
Sbjct: 102 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLH 156
Query: 550 ------QLTPPIAHRNLQSSSIYLTEDYAAKISDFSF 580
Q P IAHR+L+S +I + ++ I+D
Sbjct: 157 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL 193
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 93/206 (45%), Gaps = 17/206 (8%)
Query: 430 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKN 489
++G S G V V K + S ++ K+ + ++ + D L +VNH
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMER--DILVEVNHP- 86
Query: 490 FVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMH 549
F+ + Y + E ++ ++ G LF L +E + ++ +A +A L+H+H
Sbjct: 87 FIVKLHYAFQTEG-KLYLILDFLRGGDLFTRLS-KEVMFTEEDVKFYLA-ELALALDHLH 143
Query: 550 QLTPPIAHRNLQSSSIYLTEDYAAKISDFSF----WNNTTAAKTGSAAMELLETSAVDLE 605
L I +R+L+ +I L E+ K++DF ++ A + +E + V+
Sbjct: 144 SLG--IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRR 201
Query: 606 SNV-----YSFGTILFEMITGRISYS 626
+ +SFG ++FEM+TG + +
Sbjct: 202 GHTQSADWWSFGVLMFEMLTGTLPFQ 227
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 116/295 (39%), Gaps = 58/295 (19%)
Query: 435 FSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNL 493
+G+ G V T+ SSG +AV ++ + + E F + + + H+N V +
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ----QRRELLFNEVV-IMRDYQHENVVEM 213
Query: 494 I-GYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLT 552
Y DE + M E + H + E + IA A CL + L+
Sbjct: 214 YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQ---------IA---AVCLAVLQALS 261
Query: 553 ----PPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAK------TGSA---AMELLET 599
+ HR+++S SI LT D K+SDF F + G+ A EL+
Sbjct: 262 VLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISR 321
Query: 600 SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ- 658
E +++S G ++ EM+ G Y + LK + ++D + P LK+
Sbjct: 322 LPYGPEVDIWSLGIMVIEMVDGEPPY---------FNEPPLKAMKMIRDNLPPRLKNLHK 372
Query: 659 -----ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPDGATPKLSPL 708
+ L+ LLV + P+ R AA+L + + G + PL
Sbjct: 373 VSPSLKGFLDRLLV-----------RDPAQRATAAELLKHPFLAKAGPPASIVPL 416
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 64/313 (20%), Positives = 128/313 (40%), Gaps = 49/313 (15%)
Query: 426 EDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV 485
E + N+ G +G+ G V K I ++S D K ++ ++I L ++
Sbjct: 25 EKYENL-GLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDD--KMVKKIAMREIKLLKQL 81
Query: 486 NHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAM----RLRIAMGM 541
H+N VNL+ C++ + + +VFE+ + ++ + L + LD+ + +I G+
Sbjct: 82 RHENLVNLLEVCKKKKRWY--LVFEFV-DHTILDDLELF-PNGLDYQVVQKYLFQIINGI 137
Query: 542 AYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF----------WNNTTAAKTGS 591
+C H H I HR+++ +I +++ K+ DF F +++ A +
Sbjct: 138 GFC--HSHN----IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYR 191
Query: 592 AAMELLETSAVDLESNVYSFGTILFEMITGRISYSIEN------------GSLENWASEY 639
A L+ +V++ G ++ EM G + ++ G+L E
Sbjct: 192 APELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQEL 251
Query: 640 LKGEQPLKDIVDPTLKSFQ------ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 693
+ P +K + + E ++ + K C+H DP +RP A+L
Sbjct: 252 FNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRP----FCAELLHH 307
Query: 694 TAMEPDGATPKLS 706
+ DG + S
Sbjct: 308 DFFQMDGFAERFS 320
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 85/206 (41%), Gaps = 28/206 (13%)
Query: 487 HKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLE 546
H++ V G+ E+++ F +V E SL E LH + + R + + C +
Sbjct: 80 HQHVVGFHGFFEDND-FV-FVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGC-Q 135
Query: 547 HMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF---------WNNTTAAKTGSAAMELL 597
++H+ + HR+L+ +++L ED KI DF T A E+L
Sbjct: 136 YLHRNR--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVL 193
Query: 598 ETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSF 657
E +V+S G I++ ++ G+ + E L+ K E + ++P S
Sbjct: 194 SKKGHSFEVDVWSIGCIMYTLLVGKPPF--ETSCLKETYLRIKKNEYSIPKHINPVAASL 251
Query: 658 QENVLEELLVVIKNCVHPDPKQRPSM 683
+ +L+ DP RP++
Sbjct: 252 IQKMLQT-----------DPTARPTI 266
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 90/213 (42%), Gaps = 35/213 (16%)
Query: 426 EDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV 485
EDF IIG DG G VYK + E +V + + + LE + +ID L+
Sbjct: 36 EDFWEIIGELGDGAFGKVYK---AQNKETSVLAAAKVIDTKSEEELED-YMVEIDILASC 91
Query: 486 NHKNFVNLIG--YCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAY 543
+H N V L+ Y E + ++ E+ G++ +A L+ L +
Sbjct: 92 DHPNIVKLLDAFYYENN----LWILIEFCAGGAV-------DAVMLELERPLTESQIQVV 140
Query: 544 CLEHMHQLT----PPIAHRNLQSSSIYLTEDYAAKISDF--SFWNNTTAAKTGS------ 591
C + + L I HR+L++ +I T D K++DF S N T + S
Sbjct: 141 CKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPY 200
Query: 592 ---AAMELLETSA---VDLESNVYSFGTILFEM 618
+ + ETS D +++V+S G L EM
Sbjct: 201 WMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 85/206 (41%), Gaps = 28/206 (13%)
Query: 487 HKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLE 546
H++ V G+ E+++ F +V E SL E LH + + R + + C +
Sbjct: 76 HQHVVGFHGFFEDND-FV-FVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGC-Q 131
Query: 547 HMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF---------WNNTTAAKTGSAAMELL 597
++H+ + HR+L+ +++L ED KI DF T A E+L
Sbjct: 132 YLHRNR--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVL 189
Query: 598 ETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSF 657
E +V+S G I++ ++ G+ + E L+ K E + ++P S
Sbjct: 190 SKKGHSFEVDVWSIGCIMYTLLVGKPPF--ETSCLKETYLRIKKNEYSIPKHINPVAASL 247
Query: 658 QENVLEELLVVIKNCVHPDPKQRPSM 683
+ +L+ DP RP++
Sbjct: 248 IQKMLQT-----------DPTARPTI 262
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 85/206 (41%), Gaps = 28/206 (13%)
Query: 487 HKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLE 546
H++ V G+ E+++ F +V E SL E LH + + R + + C +
Sbjct: 76 HQHVVGFHGFFEDND-FV-FVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGC-Q 131
Query: 547 HMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF---------WNNTTAAKTGSAAMELL 597
++H+ + HR+L+ +++L ED KI DF T A E+L
Sbjct: 132 YLHRNR--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVL 189
Query: 598 ETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSF 657
E +V+S G I++ ++ G+ + E L+ K E + ++P S
Sbjct: 190 SKKGHSFEVDVWSIGCIMYTLLVGKPPF--ETSCLKETYLRIKKNEYSIPKHINPVAASL 247
Query: 658 QENVLEELLVVIKNCVHPDPKQRPSM 683
+ +L+ DP RP++
Sbjct: 248 IQKMLQT-----------DPTARPTI 262
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 89/206 (43%), Gaps = 28/206 (13%)
Query: 432 IGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNF 490
I S G GTVYKG + G ++ + + R S + + ++ V++ +
Sbjct: 27 IKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 86
Query: 491 VNLIGYCEEDEPFTRMMVFEYSPNGSLFEHL-----HIQEAEHLDWAMRLRIAMGMAYCL 545
L+G C T ++ + P G L +++ +I L+W ++IA GM Y
Sbjct: 87 CRLLGICLTS---TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGMNYLE 141
Query: 546 EHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA------AKTGSAAMELLET 599
+ + HR+L + ++ + KI+DF A A+ G ++ +
Sbjct: 142 DRR------LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 195
Query: 600 SAV-----DLESNVYSFGTILFEMIT 620
++ +S+V+S+G ++E++T
Sbjct: 196 ESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 118/284 (41%), Gaps = 48/284 (16%)
Query: 427 DFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLES--QFRKKIDTLSK 484
+ +IGS + V Y V I R + K S + K+I +S+
Sbjct: 13 ELQEVIGSGATAVVQAAYCAPKKEKVAI--------KRINLEKCQTSMDELLKEIQAMSQ 64
Query: 485 VNHKNFVNL-IGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEH----LDWAMRLRIAM 539
+H N V+ + +DE + M + + +H+ + + EH LD + I
Sbjct: 65 CHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHI-VAKGEHKSGVLDESTIATILR 123
Query: 540 GMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF-----------WNNTTAAK 588
+ LE++H+ HR++++ +I L ED + +I+DF N
Sbjct: 124 EVLEGLEYLHKNGQ--IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTF 181
Query: 589 TGS---AAMELLE-TSAVDLESNVYSFGTILFEMITGRISY------SIENGSLENWASE 638
G+ A E++E D +++++SFG E+ TG Y + +L+N
Sbjct: 182 VGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPS 241
Query: 639 YLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPS 682
G Q K+++ KSF++ +I C+ DP++RP+
Sbjct: 242 LETGVQD-KEMLKKYGKSFRK--------MISLCLQKDPEKRPT 276
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 94/227 (41%), Gaps = 28/227 (12%)
Query: 426 EDFSNIIGSFSDGTVGTVYKGTLSSGVE-IAVTSTSVKSRADWSKNLESQFRKKIDTLSK 484
ED+ +++ + +G G V E +AV +K D +N+ +K+I
Sbjct: 6 EDW-DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENI----KKEIXINKM 60
Query: 485 VNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRL--RIAMGMA 542
+NH+N V G+ E + + EY G LF+ + A R ++ G+
Sbjct: 61 LNHENVVKFYGHRREGN--IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 118
Query: 543 YCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF-----WN------NTTAAKTGS 591
Y +H + I HR+++ ++ L E KISDF +N N
Sbjct: 119 Y----LHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 172
Query: 592 AAMELLETSAVDLES-NVYSFGTILFEMITGRISYSIENGSLENWAS 637
A ELL+ E +V+S G +L M+ G + + + S + ++
Sbjct: 173 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSD 219
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 94/227 (41%), Gaps = 28/227 (12%)
Query: 426 EDFSNIIGSFSDGTVGTVYKGTLSSGVE-IAVTSTSVKSRADWSKNLESQFRKKIDTLSK 484
ED+ +++ + +G G V E +AV +K D +N+ +K+I
Sbjct: 6 EDW-DLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENI----KKEICINKM 60
Query: 485 VNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRL--RIAMGMA 542
+NH+N V G+ E + + EY G LF+ + A R ++ G+
Sbjct: 61 LNHENVVKFYGHRREGN--IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 118
Query: 543 YCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF-----WN------NTTAAKTGS 591
Y +H + I HR+++ ++ L E KISDF +N N
Sbjct: 119 Y----LHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 172
Query: 592 AAMELLETSAVDLES-NVYSFGTILFEMITGRISYSIENGSLENWAS 637
A ELL+ E +V+S G +L M+ G + + + S + ++
Sbjct: 173 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSD 219
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 112/287 (39%), Gaps = 53/287 (18%)
Query: 433 GSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFV 491
G+F T Y G + S + V +K A ++ ++ LS + NH N V
Sbjct: 34 GAFGKVVEATAY-GLIKSDAAMTVAVKMLKPSAHLTE--REALMSELKVLSYLGNHMNIV 90
Query: 492 NLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHL--------------------DW 531
NL+G C P +++ EY G L L + +
Sbjct: 91 NLLGACTIGGP--TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 148
Query: 532 AMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW----NNTTAA 587
+ ++A GMA+ + HR+L + +I LT KI DF N++
Sbjct: 149 SFSYQVAKGMAFLA------SKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV 202
Query: 588 KTGSA-------AMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYL 640
G+A A E + ES+V+S+G L+E+ + + S G + S++
Sbjct: 203 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS--LGSSPYPGMPVD--SKFY 258
Query: 641 KGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIA 687
K + ++ P E+ E+ ++K C DP +RP+ + I
Sbjct: 259 KMIKEGFRMLSP------EHAPAEMYDIMKTCWDADPLKRPTFKQIV 299
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 118/284 (41%), Gaps = 48/284 (16%)
Query: 427 DFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLES--QFRKKIDTLSK 484
+ +IGS + V Y V I R + K S + K+I +S+
Sbjct: 18 ELQEVIGSGATAVVQAAYCAPKKEKVAI--------KRINLEKCQTSMDELLKEIQAMSQ 69
Query: 485 VNHKNFVNL-IGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEH----LDWAMRLRIAM 539
+H N V+ + +DE + M + + +H+ + + EH LD + I
Sbjct: 70 CHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHI-VAKGEHKSGVLDESTIATILR 128
Query: 540 GMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF-----------WNNTTAAK 588
+ LE++H+ HR++++ +I L ED + +I+DF N
Sbjct: 129 EVLEGLEYLHKNGQ--IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTF 186
Query: 589 TGS---AAMELLE-TSAVDLESNVYSFGTILFEMITGRISY------SIENGSLENWASE 638
G+ A E++E D +++++SFG E+ TG Y + +L+N
Sbjct: 187 VGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPS 246
Query: 639 YLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPS 682
G Q K+++ KSF++ +I C+ DP++RP+
Sbjct: 247 LETGVQD-KEMLKKYGKSFRK--------MISLCLQKDPEKRPT 281
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 112/287 (39%), Gaps = 53/287 (18%)
Query: 433 GSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFV 491
G+F T Y G + S + V +K A ++ ++ LS + NH N V
Sbjct: 50 GAFGKVVEATAY-GLIKSDAAMTVAVKMLKPSAHLTE--REALMSELKVLSYLGNHMNIV 106
Query: 492 NLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHL--------------------DW 531
NL+G C P +++ EY G L L + +
Sbjct: 107 NLLGACTIGGP--TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 164
Query: 532 AMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW----NNTTAA 587
+ ++A GMA+ + HR+L + +I LT KI DF N++
Sbjct: 165 SFSYQVAKGMAFLA------SKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV 218
Query: 588 KTGSA-------AMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYL 640
G+A A E + ES+V+S+G L+E+ + + S G + S++
Sbjct: 219 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS--LGSSPYPGMPVD--SKFY 274
Query: 641 KGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIA 687
K + ++ P E+ E+ ++K C DP +RP+ + I
Sbjct: 275 KMIKEGFRMLSP------EHAPAEMYDIMKTCWDADPLKRPTFKQIV 315
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 59/288 (20%), Positives = 117/288 (40%), Gaps = 37/288 (12%)
Query: 427 DFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV- 485
D N+ G G V + + G++ T +V + S+ R + L +
Sbjct: 27 DRLNLGKPLGRGAFGQVIEAD-AFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILI 85
Query: 486 ---NHKNFVNLIGYC-EEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGM 541
+H N VNL+G C + P M++ E+ G+L +L + E + + + + +
Sbjct: 86 HIGHHLNVVNLLGACTKPGGPL--MVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTL 143
Query: 542 AYCLEHMHQLTPPIA--------HRNLQSSSIYLTEDYAAKISDFSF----WNNTTAAKT 589
+ + + Q+ + HR+L + +I L+E KI DF + + +
Sbjct: 144 EHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRK 203
Query: 590 GSA-------AMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKG 642
G A A E + ++S+V+SFG +L+E+ + + S G +
Sbjct: 204 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS--LGASPYPGVKID-------- 253
Query: 643 EQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKL 690
E+ + + + T + E+ + +C H +P QRP+ + L
Sbjct: 254 EEFXRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 301
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 94/228 (41%), Gaps = 28/228 (12%)
Query: 425 CEDFSNIIGSFSDGTVGTVYKGTLSSGVE-IAVTSTSVKSRADWSKNLESQFRKKIDTLS 483
ED+ +++ + +G G V E +AV +K D +N+ +K+I
Sbjct: 6 VEDW-DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENI----KKEIXINK 60
Query: 484 KVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRL--RIAMGM 541
+NH+N V G+ E + + EY G LF+ + A R ++ G+
Sbjct: 61 MLNHENVVKFYGHRREGN--IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGV 118
Query: 542 AYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF-----WN------NTTAAKTG 590
Y +H + I HR+++ ++ L E KISDF +N N
Sbjct: 119 VY----LHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLP 172
Query: 591 SAAMELLETSAVDLES-NVYSFGTILFEMITGRISYSIENGSLENWAS 637
A ELL+ E +V+S G +L M+ G + + + S + ++
Sbjct: 173 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSD 220
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 95/227 (41%), Gaps = 28/227 (12%)
Query: 426 EDFSNIIGSFSDGTVGTVYKGTLSSGVE-IAVTSTSVKSRADWSKNLESQFRKKIDTLSK 484
ED+ +++ + +G G V E +AV +K D +N+ +K+I +
Sbjct: 7 EDW-DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENI----KKEICINAM 61
Query: 485 VNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRL--RIAMGMA 542
+NH+N V G+ E + + EY G LF+ + A R ++ G+
Sbjct: 62 LNHENVVKFYGHRREGN--IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 119
Query: 543 YCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF-----WN------NTTAAKTGS 591
Y +H + I HR+++ ++ L E KISDF +N N
Sbjct: 120 Y----LHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 173
Query: 592 AAMELLETSAVDLES-NVYSFGTILFEMITGRISYSIENGSLENWAS 637
A ELL+ E +V+S G +L M+ G + + + S + ++
Sbjct: 174 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSD 220
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 94/227 (41%), Gaps = 28/227 (12%)
Query: 426 EDFSNIIGSFSDGTVGTVYKGTLSSGVE-IAVTSTSVKSRADWSKNLESQFRKKIDTLSK 484
ED+ +++ + +G G V E +AV +K D +N+ +K+I
Sbjct: 7 EDW-DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENI----KKEICINKM 61
Query: 485 VNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRL--RIAMGMA 542
+NH+N V G+ E + + EY G LF+ + A R ++ G+
Sbjct: 62 LNHENVVKFYGHRREGN--IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 119
Query: 543 YCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF-----WN------NTTAAKTGS 591
Y +H + I HR+++ ++ L E KISDF +N N
Sbjct: 120 Y----LHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 173
Query: 592 AAMELLETSAVDLES-NVYSFGTILFEMITGRISYSIENGSLENWAS 637
A ELL+ E +V+S G +L M+ G + + + S + ++
Sbjct: 174 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSD 220
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 94/227 (41%), Gaps = 28/227 (12%)
Query: 426 EDFSNIIGSFSDGTVGTVYKGTLSSGVE-IAVTSTSVKSRADWSKNLESQFRKKIDTLSK 484
ED+ +++ + +G G V E +AV +K D +N+ +K+I
Sbjct: 6 EDW-DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENI----KKEICINKM 60
Query: 485 VNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRL--RIAMGMA 542
+NH+N V G+ E + + EY G LF+ + A R ++ G+
Sbjct: 61 LNHENVVKFYGHRREGN--IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 118
Query: 543 YCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF-----WN------NTTAAKTGS 591
Y +H + I HR+++ ++ L E KISDF +N N
Sbjct: 119 Y----LHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 172
Query: 592 AAMELLETSAVDLES-NVYSFGTILFEMITGRISYSIENGSLENWAS 637
A ELL+ E +V+S G +L M+ G + + + S + ++
Sbjct: 173 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSD 219
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 94/228 (41%), Gaps = 28/228 (12%)
Query: 425 CEDFSNIIGSFSDGTVGTVYKGTLSSGVE-IAVTSTSVKSRADWSKNLESQFRKKIDTLS 483
ED+ +++ + +G G V E +AV +K D +N+ +K+I
Sbjct: 5 VEDW-DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENI----KKEIXINK 59
Query: 484 KVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRL--RIAMGM 541
+NH+N V G+ E + + EY G LF+ + A R ++ G+
Sbjct: 60 MLNHENVVKFYGHRREGN--IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGV 117
Query: 542 AYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF-----WN------NTTAAKTG 590
Y +H + I HR+++ ++ L E KISDF +N N
Sbjct: 118 VY----LHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLP 171
Query: 591 SAAMELLETSAVDLES-NVYSFGTILFEMITGRISYSIENGSLENWAS 637
A ELL+ E +V+S G +L M+ G + + + S + ++
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSD 219
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 94/227 (41%), Gaps = 28/227 (12%)
Query: 426 EDFSNIIGSFSDGTVGTVYKGTLSSGVE-IAVTSTSVKSRADWSKNLESQFRKKIDTLSK 484
ED+ +++ + +G G V E +AV +K D +N+ +K+I
Sbjct: 5 EDW-DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENI----KKEICINKM 59
Query: 485 VNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRL--RIAMGMA 542
+NH+N V G+ E + + EY G LF+ + A R ++ G+
Sbjct: 60 LNHENVVKFYGHRREGN--IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 117
Query: 543 YCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF-----WN------NTTAAKTGS 591
Y +H + I HR+++ ++ L E KISDF +N N
Sbjct: 118 Y----LHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 171
Query: 592 AAMELLETSAVDLES-NVYSFGTILFEMITGRISYSIENGSLENWAS 637
A ELL+ E +V+S G +L M+ G + + + S + ++
Sbjct: 172 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSD 218
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 94/227 (41%), Gaps = 28/227 (12%)
Query: 426 EDFSNIIGSFSDGTVGTVYKGTLSSGVE-IAVTSTSVKSRADWSKNLESQFRKKIDTLSK 484
ED+ +++ + +G G V E +AV +K D +N+ +K+I
Sbjct: 7 EDW-DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENI----KKEICINKM 61
Query: 485 VNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRL--RIAMGMA 542
+NH+N V G+ E + + EY G LF+ + A R ++ G+
Sbjct: 62 LNHENVVKFYGHRREGN--IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 119
Query: 543 YCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF-----WN------NTTAAKTGS 591
Y +H + I HR+++ ++ L E KISDF +N N
Sbjct: 120 Y----LHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 173
Query: 592 AAMELLETSAVDLES-NVYSFGTILFEMITGRISYSIENGSLENWAS 637
A ELL+ E +V+S G +L M+ G + + + S + ++
Sbjct: 174 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSD 220
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 94/227 (41%), Gaps = 28/227 (12%)
Query: 426 EDFSNIIGSFSDGTVGTVYKGTLSSGVE-IAVTSTSVKSRADWSKNLESQFRKKIDTLSK 484
ED+ +++ + +G G V E +AV +K D +N+ +K+I
Sbjct: 7 EDW-DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENI----KKEICINKM 61
Query: 485 VNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRL--RIAMGMA 542
+NH+N V G+ E + + EY G LF+ + A R ++ G+
Sbjct: 62 LNHENVVKFYGHRREGN--IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 119
Query: 543 YCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF-----WN------NTTAAKTGS 591
Y +H + I HR+++ ++ L E KISDF +N N
Sbjct: 120 Y----LHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 173
Query: 592 AAMELLETSAVDLES-NVYSFGTILFEMITGRISYSIENGSLENWAS 637
A ELL+ E +V+S G +L M+ G + + + S + ++
Sbjct: 174 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSD 220
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 94/227 (41%), Gaps = 28/227 (12%)
Query: 426 EDFSNIIGSFSDGTVGTVYKGTLSSGVE-IAVTSTSVKSRADWSKNLESQFRKKIDTLSK 484
ED+ +++ + +G G V E +AV +K D +N+ +K+I
Sbjct: 7 EDW-DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENI----KKEICINKM 61
Query: 485 VNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRL--RIAMGMA 542
+NH+N V G+ E + + EY G LF+ + A R ++ G+
Sbjct: 62 LNHENVVKFYGHRREGN--IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 119
Query: 543 YCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF-----WN------NTTAAKTGS 591
Y +H + I HR+++ ++ L E KISDF +N N
Sbjct: 120 Y----LHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 173
Query: 592 AAMELLETSAVDLES-NVYSFGTILFEMITGRISYSIENGSLENWAS 637
A ELL+ E +V+S G +L M+ G + + + S + ++
Sbjct: 174 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSD 220
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 112/287 (39%), Gaps = 53/287 (18%)
Query: 433 GSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFV 491
G+F T Y G + S + V +K A ++ ++ LS + NH N V
Sbjct: 52 GAFGKVVEATAY-GLIKSDAAMTVAVKMLKPSAHLTE--REALMSELKVLSYLGNHMNIV 108
Query: 492 NLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHL--------------------DW 531
NL+G C P +++ EY G L L + +
Sbjct: 109 NLLGACTIGGP--TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 166
Query: 532 AMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW----NNTTAA 587
+ ++A GMA+ + HR+L + +I LT KI DF N++
Sbjct: 167 SFSYQVAKGMAFLA------SKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV 220
Query: 588 KTGSA-------AMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYL 640
G+A A E + ES+V+S+G L+E+ + + S G + S++
Sbjct: 221 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS--LGSSPYPGMPVD--SKFY 276
Query: 641 KGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIA 687
K + ++ P E+ E+ ++K C DP +RP+ + I
Sbjct: 277 KMIKEGFRMLSP------EHAPAEMYDIMKTCWDADPLKRPTFKQIV 317
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 112/287 (39%), Gaps = 53/287 (18%)
Query: 433 GSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFV 491
G+F T Y G + S + V +K A ++ ++ LS + NH N V
Sbjct: 57 GAFGKVVEATAY-GLIKSDAAMTVAVKMLKPSAHLTE--REALMSELKVLSYLGNHMNIV 113
Query: 492 NLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHL--------------------DW 531
NL+G C P +++ EY G L L + +
Sbjct: 114 NLLGACTIGGP--TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 171
Query: 532 AMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW----NNTTAA 587
+ ++A GMA+ + HR+L + +I LT KI DF N++
Sbjct: 172 SFSYQVAKGMAFLA------SKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV 225
Query: 588 KTGSA-------AMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYL 640
G+A A E + ES+V+S+G L+E+ + + S G + S++
Sbjct: 226 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS--LGSSPYPGMPVD--SKFY 281
Query: 641 KGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIA 687
K + ++ P E+ E+ ++K C DP +RP+ + I
Sbjct: 282 KMIKEGFRMLSP------EHAPAEMYDIMKTCWDADPLKRPTFKQIV 322
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 112/287 (39%), Gaps = 53/287 (18%)
Query: 433 GSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFV 491
G+F T Y G + S + V +K A ++ ++ LS + NH N V
Sbjct: 57 GAFGKVVEATAY-GLIKSDAAMTVAVKMLKPSAHLTE--REALMSELKVLSYLGNHMNIV 113
Query: 492 NLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHL--------------------DW 531
NL+G C P +++ EY G L L + +
Sbjct: 114 NLLGACTIGGP--TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 171
Query: 532 AMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW----NNTTAA 587
+ ++A GMA+ + HR+L + +I LT KI DF N++
Sbjct: 172 SFSYQVAKGMAFLA------SKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYV 225
Query: 588 KTGSA-------AMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYL 640
G+A A E + ES+V+S+G L+E+ + + S G + S++
Sbjct: 226 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS--LGSSPYPGMPVD--SKFY 281
Query: 641 KGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIA 687
K + ++ P E+ E+ ++K C DP +RP+ + I
Sbjct: 282 KMIKEGFRMLSP------EHAPAEMYDIMKTCWDADPLKRPTFKQIV 322
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 94/227 (41%), Gaps = 28/227 (12%)
Query: 426 EDFSNIIGSFSDGTVGTVYKGTLSSGVE-IAVTSTSVKSRADWSKNLESQFRKKIDTLSK 484
ED+ +++ + +G G V E +AV +K D +N+ +K+I
Sbjct: 6 EDW-DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENI----KKEICINKM 60
Query: 485 VNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRL--RIAMGMA 542
+NH+N V G+ E + + EY G LF+ + A R ++ G+
Sbjct: 61 LNHENVVKFYGHRREGN--IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 118
Query: 543 YCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF-----WN------NTTAAKTGS 591
Y +H + I HR+++ ++ L E KISDF +N N
Sbjct: 119 Y----LHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 172
Query: 592 AAMELLETSAVDLES-NVYSFGTILFEMITGRISYSIENGSLENWAS 637
A ELL+ E +V+S G +L M+ G + + + S + ++
Sbjct: 173 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSD 219
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 91/223 (40%), Gaps = 27/223 (12%)
Query: 430 NIIGSFSDGTVGTVYKGTLSSGVE-IAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHK 488
+++ + +G G V E +AV +K D +N+ +K+I +NH+
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENI----KKEICINKMLNHE 64
Query: 489 NFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRL--RIAMGMAYCLE 546
N V G+ E + + EY G LF+ + A R ++ G+ Y
Sbjct: 65 NVVKFYGHRREGN--IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY--- 119
Query: 547 HMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF-----WN------NTTAAKTGSAAME 595
+H + I HR+++ ++ L E KISDF +N N A E
Sbjct: 120 -LHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 596 LLETSAVDLES-NVYSFGTILFEMITGRISYSIENGSLENWAS 637
LL+ E +V+S G +L M+ G + + + S + ++
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSD 219
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 89/206 (43%), Gaps = 28/206 (13%)
Query: 432 IGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNF 490
I S G GTVYKG + G ++ + + R S + + ++ V++ +
Sbjct: 27 IKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 86
Query: 491 VNLIGYCEEDEPFTRMMVFEYSPNGSLFEHL-----HIQEAEHLDWAMRLRIAMGMAYCL 545
L+G C T ++ + P G L +++ +I L+W ++IA GM Y
Sbjct: 87 CRLLGICLTS---TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGMNYLE 141
Query: 546 EHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA------AKTGSAAMELLET 599
+ + HR+L + ++ + KI+DF A A+ G ++ +
Sbjct: 142 DRR------LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 195
Query: 600 SAV-----DLESNVYSFGTILFEMIT 620
++ +S+V+S+G ++E++T
Sbjct: 196 ESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 91/223 (40%), Gaps = 27/223 (12%)
Query: 430 NIIGSFSDGTVGTVYKGTLSSGVE-IAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHK 488
+++ + +G G V E +AV +K D +N+ +K+I +NH+
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENI----KKEICINKMLNHE 64
Query: 489 NFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRL--RIAMGMAYCLE 546
N V G+ E + + EY G LF+ + A R ++ G+ Y
Sbjct: 65 NVVKFYGHRREGN--IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY--- 119
Query: 547 HMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF-----WN------NTTAAKTGSAAME 595
+H + I HR+++ ++ L E KISDF +N N A E
Sbjct: 120 -LHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 596 LLETSAVDLES-NVYSFGTILFEMITGRISYSIENGSLENWAS 637
LL+ E +V+S G +L M+ G + + + S + ++
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSD 219
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 94/227 (41%), Gaps = 28/227 (12%)
Query: 426 EDFSNIIGSFSDGTVGTVYKGTLSSGVE-IAVTSTSVKSRADWSKNLESQFRKKIDTLSK 484
ED+ +++ + +G G V E +AV +K D +N+ +K+I
Sbjct: 6 EDW-DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENI----KKEICINKM 60
Query: 485 VNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRL--RIAMGMA 542
+NH+N V G+ E + + EY G LF+ + A R ++ G+
Sbjct: 61 LNHENVVKFYGHRREGN--IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 118
Query: 543 YCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF-----WN------NTTAAKTGS 591
Y +H + I HR+++ ++ L E KISDF +N N
Sbjct: 119 Y----LHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 172
Query: 592 AAMELLETSAVDLES-NVYSFGTILFEMITGRISYSIENGSLENWAS 637
A ELL+ E +V+S G +L M+ G + + + S + ++
Sbjct: 173 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSD 219
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 59/288 (20%), Positives = 117/288 (40%), Gaps = 37/288 (12%)
Query: 427 DFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV- 485
D N+ G G V + + G++ T +V + S+ R + L +
Sbjct: 27 DRLNLGKPLGRGAFGQVIEAD-AFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILI 85
Query: 486 ---NHKNFVNLIGYC-EEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGM 541
+H N VNL+G C + P M++ E+ G+L +L + E + + + + +
Sbjct: 86 HIGHHLNVVNLLGACTKPGGPL--MVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTL 143
Query: 542 AYCLEHMHQLTPPIA--------HRNLQSSSIYLTEDYAAKISDFSF----WNNTTAAKT 589
+ + + Q+ + HR+L + +I L+E KI DF + + +
Sbjct: 144 EHLICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 203
Query: 590 GSA-------AMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKG 642
G A A E + ++S+V+SFG +L+E+ + + S G +
Sbjct: 204 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS--LGASPYPGVKID-------- 253
Query: 643 EQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKL 690
E+ + + + T + E+ + +C H +P QRP+ + L
Sbjct: 254 EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 301
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 84/203 (41%), Gaps = 15/203 (7%)
Query: 426 EDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV 485
+DF I G G VY I KS+ + + +E Q R++I+ + +
Sbjct: 23 DDFE-IGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIE-KEGVEHQLRREIEIQAHL 80
Query: 486 NHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCL 545
+H N + L Y + ++ EY+P G L++ L Q++ D I +A L
Sbjct: 81 HHPNILRLYNYFYDRRRI--YLILEYAPRGELYKEL--QKSCTFDEQRTATIMEELADAL 136
Query: 546 EHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF-------SFWNNTTAAKTGSAAMELLE 598
+ H + HR+++ ++ L KI+DF S T E++E
Sbjct: 137 MYCH--GKKVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRKTMCGTLDYLPPEMIE 194
Query: 599 TSAVDLESNVYSFGTILFEMITG 621
+ + +++ G + +E++ G
Sbjct: 195 GRMHNEKVDLWCIGVLCYELLVG 217
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 91/223 (40%), Gaps = 27/223 (12%)
Query: 430 NIIGSFSDGTVGTVYKGTLSSGVE-IAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHK 488
+++ + +G G V E +AV +K D +N+ +K+I +NH+
Sbjct: 10 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENI----KKEICINKMLNHE 65
Query: 489 NFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRL--RIAMGMAYCLE 546
N V G+ E + + EY G LF+ + A R ++ G+ Y
Sbjct: 66 NVVKFYGHRREGN--IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY--- 120
Query: 547 HMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF-----WN------NTTAAKTGSAAME 595
+H + I HR+++ ++ L E KISDF +N N A E
Sbjct: 121 -LHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 596 LLETSAVDLES-NVYSFGTILFEMITGRISYSIENGSLENWAS 637
LL+ E +V+S G +L M+ G + + + S + ++
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSD 220
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 107/261 (40%), Gaps = 50/261 (19%)
Query: 430 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKN 489
++ G G V+ G G ++AV A W + E I + H+N
Sbjct: 40 QMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTEEASWFRETE------IYQTVLMRHEN 92
Query: 490 FVNLIGY-CEEDEPFTRM-MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEH 547
+ I + +T++ ++ +Y NGSL+++L ++ LD L++A L H
Sbjct: 93 ILGFIAADIKGTGSWTQLYLITDYHENGSLYDYL---KSTTLDAKSMLKLAYSSVSGLCH 149
Query: 548 MH------QLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW-------------NNTTAAK 588
+H Q P IAHR+L+S +I + ++ I+D NT
Sbjct: 150 LHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGT 209
Query: 589 TGSAAMELLETS------AVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKG 642
E+L+ S + +++YSFG IL+E+ +S I EY
Sbjct: 210 KRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGI--------VEEY--- 258
Query: 643 EQPLKDIV--DPTLKSFQENV 661
+ P D+V DP+ + +E V
Sbjct: 259 QLPYHDLVPSDPSYEDMREIV 279
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 89/206 (43%), Gaps = 28/206 (13%)
Query: 432 IGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNF 490
I S G GTVYKG + G ++ + + R S + + ++ V++ +
Sbjct: 20 IKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 79
Query: 491 VNLIGYCEEDEPFTRMMVFEYSPNGSLFEHL-----HIQEAEHLDWAMRLRIAMGMAYCL 545
L+G C T ++ + P G L +++ +I L+W ++IA GM Y
Sbjct: 80 CRLLGICLTS---TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGMNYLE 134
Query: 546 EHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA------AKTGSAAMELLET 599
+ + HR+L + ++ + KI+DF A A+ G ++ +
Sbjct: 135 DRR------LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 188
Query: 600 SAV-----DLESNVYSFGTILFEMIT 620
++ +S+V+S+G ++E++T
Sbjct: 189 ESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/281 (21%), Positives = 113/281 (40%), Gaps = 41/281 (14%)
Query: 438 GTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV----NHKNFVNL 493
G G V + + G++ T +V + S+ R + L + +H N VNL
Sbjct: 38 GAFGQVIEAD-AFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 96
Query: 494 IGYC-EEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLT 552
+G C + P M++ E+ G+L +L + E + + + LEH+ +
Sbjct: 97 LGACTKPGGPL--MVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 553 PPIA------------HRNLQSSSIYLTEDYAAKISDFSF----WNNTTAAKTGSA---- 592
+A HR+L + +I L+E KI DF + + + G A
Sbjct: 155 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLPL 214
Query: 593 ---AMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDI 649
A E + ++S+V+SFG +L+E+ + + S G + E+ + +
Sbjct: 215 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS--LGASPYPGVKID--------EEFCRRL 264
Query: 650 VDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKL 690
+ T + E+ + +C H +P QRP+ + L
Sbjct: 265 KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 94/227 (41%), Gaps = 28/227 (12%)
Query: 426 EDFSNIIGSFSDGTVGTVYKGTLSSGVE-IAVTSTSVKSRADWSKNLESQFRKKIDTLSK 484
ED+ +++ + +G G V E +AV +K D +N+ +K+I
Sbjct: 6 EDW-DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENI----KKEICINKM 60
Query: 485 VNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRL--RIAMGMA 542
+NH+N V G+ E + + EY G LF+ + A R ++ G+
Sbjct: 61 LNHENVVKFYGHRREGN--IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 118
Query: 543 YCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF-----WN------NTTAAKTGS 591
Y +H + I HR+++ ++ L E KISDF +N N
Sbjct: 119 Y----LHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 172
Query: 592 AAMELLETSAVDLES-NVYSFGTILFEMITGRISYSIENGSLENWAS 637
A ELL+ E +V+S G +L M+ G + + + S + ++
Sbjct: 173 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSD 219
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 80/188 (42%), Gaps = 25/188 (13%)
Query: 453 EIAVTSTSVKSRADWSKNLESQFR----KKIDTLSKVN-HKNFVNLIGYCEEDEPFTRMM 507
E AV V +S + R K++D L KV+ H N + L E + F +
Sbjct: 44 EYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFF--FL 101
Query: 508 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYL 567
VF+ G LF++L E L +I + + +H+L I HR+L+ +I L
Sbjct: 102 VFDLMKKGELFDYL--TEKVTLSEKETRKIMRALLEVICALHKLN--IVHRDLKPENILL 157
Query: 568 TEDYAAKISDFSFWNN--------TTAAKTGSAAMELLETSAVD------LESNVYSFGT 613
+D K++DF F + A E++E S D E +++S G
Sbjct: 158 DDDMNIKLTDFGFSCQLDPGEKLRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGV 217
Query: 614 ILFEMITG 621
I++ ++ G
Sbjct: 218 IMYTLLAG 225
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 94/227 (41%), Gaps = 28/227 (12%)
Query: 426 EDFSNIIGSFSDGTVGTVYKGTLSSGVE-IAVTSTSVKSRADWSKNLESQFRKKIDTLSK 484
ED+ +++ + +G G V E +AV +K D +N+ +K+I
Sbjct: 6 EDW-DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENI----KKEICINKM 60
Query: 485 VNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRL--RIAMGMA 542
+NH+N V G+ E + + EY G LF+ + A R ++ G+
Sbjct: 61 LNHENVVKFYGHRREGN--IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 118
Query: 543 YCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF-----WN------NTTAAKTGS 591
Y +H + I HR+++ ++ L E KISDF +N N
Sbjct: 119 Y----LHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPY 172
Query: 592 AAMELLETSAVDLES-NVYSFGTILFEMITGRISYSIENGSLENWAS 637
A ELL+ E +V+S G +L M+ G + + + S + ++
Sbjct: 173 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSD 219
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 94/227 (41%), Gaps = 28/227 (12%)
Query: 426 EDFSNIIGSFSDGTVGTVYKGTLSSGVE-IAVTSTSVKSRADWSKNLESQFRKKIDTLSK 484
ED+ +++ + +G G V E +AV +K D +N+ +K+I
Sbjct: 7 EDW-DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENI----KKEICINKM 61
Query: 485 VNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRL--RIAMGMA 542
+NH+N V G+ E + + EY G LF+ + A R ++ G+
Sbjct: 62 LNHENVVKFYGHRREGN--IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 119
Query: 543 YCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF-----WN------NTTAAKTGS 591
Y +H + I HR+++ ++ L E KISDF +N N
Sbjct: 120 Y----LHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 173
Query: 592 AAMELLETSAVDLES-NVYSFGTILFEMITGRISYSIENGSLENWAS 637
A ELL+ E +V+S G +L M+ G + + + S + ++
Sbjct: 174 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSD 220
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 91/223 (40%), Gaps = 27/223 (12%)
Query: 430 NIIGSFSDGTVGTVYKGTLSSGVE-IAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHK 488
+++ + +G G V E +AV +K D +N+ +K+I +NH+
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENI----KKEICINKMLNHE 64
Query: 489 NFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRL--RIAMGMAYCLE 546
N V G+ E + + EY G LF+ + A R ++ G+ Y
Sbjct: 65 NVVKFYGHRREGN--IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY--- 119
Query: 547 HMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF-----WN------NTTAAKTGSAAME 595
+H + I HR+++ ++ L E KISDF +N N A E
Sbjct: 120 -LHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPE 176
Query: 596 LLETSAVDLES-NVYSFGTILFEMITGRISYSIENGSLENWAS 637
LL+ E +V+S G +L M+ G + + + S + ++
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSD 219
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 97/252 (38%), Gaps = 44/252 (17%)
Query: 432 IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFV 491
IGS + G V Y L V I S +++ + K+ VNHKN +
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKV-----VNHKNII 86
Query: 492 NLIGYCEEDEPFTRMMVFEYSPNGSL--FEHLHIQEAEHLDWAMRLRIAMG-----MAYC 544
L+ ++P SL F+ ++I E +D + I M M+Y
Sbjct: 87 GLLNV--------------FTPQKSLEEFQDVYIV-MELMDANLSQVIQMELDHERMSYL 131
Query: 545 LEHM-----HQLTPPIAHRNLQSSSIYLTEDYAAKISDF--------SFWNNTTAAKTGS 591
L M H + I HR+L+ S+I + D KI DF SF
Sbjct: 132 LYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYY 191
Query: 592 AAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENW--ASEYLKGEQP-LKD 648
A E++ +++S G I+ EMI G + + ++ W E L P
Sbjct: 192 RAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFP-GTDHIDQWNKVIEQLGTPSPEFMK 250
Query: 649 IVDPTLKSFQEN 660
+ PT++++ EN
Sbjct: 251 KLQPTVRTYVEN 262
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 95/219 (43%), Gaps = 31/219 (14%)
Query: 427 DFSNIIGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV 485
D +I G G V++ T ++G A +D + RK+I T+S +
Sbjct: 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESD-----KETVRKEIQTMSVL 211
Query: 486 NHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLF-----EHLHIQEAEHLDWAMRLRIAMG 540
H VNL E+D +M++E+ G LF EH + E E +++ MR ++ G
Sbjct: 212 RHPTLVNLHDAFEDDNEM--VMIYEFMSGGELFEKVADEHNKMSEDEAVEY-MR-QVCKG 267
Query: 541 MAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAA--KISDFSFW-----NNTTAAKTGS-- 591
+ HMH+ H +L+ +I T + K+ DF + TG+
Sbjct: 268 LC----HMHENN--YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAE 321
Query: 592 -AAMELLETSAVDLESNVYSFGTILFEMITGRISYSIEN 629
AA E+ E V ++++S G + + +++G + EN
Sbjct: 322 FAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEN 360
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 101/252 (40%), Gaps = 44/252 (17%)
Query: 432 IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFV 491
IGS + G V Y L V I S +++ + + +R+ + + VNHKN +
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT----HAKRAYRELV-LMKCVNHKNII 86
Query: 492 NLIGYCEEDEPFTRMMVFEYSPNGSL--FEHLHIQEAEHLDWAMRLRIAM-----GMAYC 544
L+ ++P SL F+ ++I E +D + I M M+Y
Sbjct: 87 GLLNV--------------FTPQKSLEEFQDVYIV-MELMDANLCQVIQMELDHERMSYL 131
Query: 545 LEHM-----HQLTPPIAHRNLQSSSIYLTEDYAAKISDF--------SFWNNTTAAKTGS 591
L M H + I HR+L+ S+I + D KI DF SF
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPEVVTRYY 191
Query: 592 AAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDI-- 649
A E++ +++S G I+ EMI G + + ++ W + P +
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFP-GTDHIDQWNKVIEQLGTPCPEFMK 250
Query: 650 -VDPTLKSFQEN 660
+ PT++++ EN
Sbjct: 251 KLQPTVRTYVEN 262
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/298 (21%), Positives = 116/298 (38%), Gaps = 56/298 (18%)
Query: 434 SFSDGTVGTVYKGT---LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNF 490
S GT ++KG + ++ T +K +N F + +SK++HK+
Sbjct: 15 SLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHL 74
Query: 491 VNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQ 550
V G C + ++V E+ GSL +L + ++ +L +A +A+ + + +
Sbjct: 75 VLNYGVCFCGD--ENILVQEFVKFGSLDTYLK-KNKNCINILWKLEVAKQLAWAMHFLEE 131
Query: 551 LTPPIAHRNLQSSSIYLTEDYAAKISDFSFW-------------NNTTAAKTGSAAMELL 597
T + H N+ + +I L + K + F + + E +
Sbjct: 132 NT--LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPECI 189
Query: 598 ETSA-VDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKS 656
E ++L ++ +SFGT L+E+ +G G++PL +
Sbjct: 190 ENPKNLNLATDKWSFGTTLWEICSG--------------------GDKPLSALDSQRKLQ 229
Query: 657 FQENVLE-------ELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPDGATPKLSP 707
F E+ + EL +I NC+ +P RPS R I L + TP L P
Sbjct: 230 FYEDRHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSL-------FTPDLVP 280
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 97/252 (38%), Gaps = 44/252 (17%)
Query: 432 IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFV 491
IGS + G V Y L V I S +++ + K+ VNHKN +
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKV-----VNHKNII 86
Query: 492 NLIGYCEEDEPFTRMMVFEYSPNGSL--FEHLHIQEAEHLDWAMRLRIAM-----GMAYC 544
L+ ++P SL F+ ++I E +D + I M M+Y
Sbjct: 87 GLLNV--------------FTPQKSLEEFQDVYIV-MELMDANLSQVIQMELDHERMSYL 131
Query: 545 LEHM-----HQLTPPIAHRNLQSSSIYLTEDYAAKISDF--------SFWNNTTAAKTGS 591
L M H + I HR+L+ S+I + D KI DF SF
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYY 191
Query: 592 AAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENW--ASEYLKGEQP-LKD 648
A E++ +++S G I+ EMI G + + ++ W E L P
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFP-GTDHIDQWNKVIEQLGTPSPEFMK 250
Query: 649 IVDPTLKSFQEN 660
+ PT++++ EN
Sbjct: 251 KLQPTVRTYVEN 262
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 95/219 (43%), Gaps = 31/219 (14%)
Query: 427 DFSNIIGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV 485
D +I G G V++ T ++G A +D + RK+I T+S +
Sbjct: 51 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESD-----KETVRKEIQTMSVL 105
Query: 486 NHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLF-----EHLHIQEAEHLDWAMRLRIAMG 540
H VNL E+D +M++E+ G LF EH + E E +++ MR ++ G
Sbjct: 106 RHPTLVNLHDAFEDDNEM--VMIYEFMSGGELFEKVADEHNKMSEDEAVEY-MR-QVCKG 161
Query: 541 MAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAA--KISDFSFW-----NNTTAAKTGS-- 591
+ HMH+ H +L+ +I T + K+ DF + TG+
Sbjct: 162 LC----HMHENN--YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAE 215
Query: 592 -AAMELLETSAVDLESNVYSFGTILFEMITGRISYSIEN 629
AA E+ E V ++++S G + + +++G + EN
Sbjct: 216 FAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEN 254
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/281 (21%), Positives = 113/281 (40%), Gaps = 41/281 (14%)
Query: 438 GTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV----NHKNFVNL 493
G G V + + G++ T +V + S+ R + L + +H N VNL
Sbjct: 38 GAFGQVIEAD-AFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 96
Query: 494 IGYC-EEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLT 552
+G C + P M++ E+ G+L +L + E + + + LEH+ +
Sbjct: 97 LGACTKPGGPL--MVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 553 PPIA------------HRNLQSSSIYLTEDYAAKISDFSF----WNNTTAAKTGSA---- 592
+A HR+L + +I L+E KI DF + + + G A
Sbjct: 155 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 214
Query: 593 ---AMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDI 649
A E + ++S+V+SFG +L+E+ + + S G + E+ + +
Sbjct: 215 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS--LGASPYPGVKID--------EEFCRRL 264
Query: 650 VDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKL 690
+ T + E+ + +C H +P QRP+ + L
Sbjct: 265 KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 92/206 (44%), Gaps = 17/206 (8%)
Query: 430 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKN 489
++G S G V V K T + K+ + ++ + D L+ VNH
Sbjct: 34 KVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMER--DILADVNHP- 90
Query: 490 FVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMH 549
FV + Y + E ++ ++ G LF L +E + ++ +A +A L+H+H
Sbjct: 91 FVVKLHYAFQTEG-KLYLILDFLRGGDLFTRLS-KEVMFTEEDVKFYLAE-LALGLDHLH 147
Query: 550 QLTPPIAHRNLQSSSIYLTEDYAAKISDFSF----WNNTTAAKTGSAAMELLETSAVDLE 605
L I +R+L+ +I L E+ K++DF ++ A + +E + V+ +
Sbjct: 148 SLG--IIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVNRQ 205
Query: 606 SNVYS-----FGTILFEMITGRISYS 626
+ +S +G ++FEM+TG + +
Sbjct: 206 GHSHSADWWSYGVLMFEMLTGSLPFQ 231
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 95/229 (41%), Gaps = 36/229 (15%)
Query: 486 NHKNFVNLIGYC-EEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYC 544
+H N VNL+G C + P M++ E+ G+L +L + E + + +
Sbjct: 126 HHLNVVNLLGACTKPGGPL--MVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 183
Query: 545 LEHMHQLTPPIA------------HRNLQSSSIYLTEDYAAKISDFSF----WNNTTAAK 588
LEH+ + +A HR+L + +I L+E KI DF + + +
Sbjct: 184 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 243
Query: 589 TGSA-------AMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLK 641
G A A E + ++S+V+SFG +L+E+ + + S G +
Sbjct: 244 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS--LGASPYPGVKID------- 294
Query: 642 GEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKL 690
E+ + + + T + E+ + +C H +P QRP+ + L
Sbjct: 295 -EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 342
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 94/228 (41%), Gaps = 28/228 (12%)
Query: 425 CEDFSNIIGSFSDGTVGTVYKGTLSSGVE-IAVTSTSVKSRADWSKNLESQFRKKIDTLS 483
ED+ +++ + +G G V E +AV +K D +N+ +K+I
Sbjct: 5 VEDW-DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENI----KKEICINK 59
Query: 484 KVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRL--RIAMGM 541
+NH+N V G+ E + + EY G LF+ + A R ++ G+
Sbjct: 60 MLNHENVVKFYGHRREGN--IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGV 117
Query: 542 AYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF-----WN------NTTAAKTG 590
Y +H + I HR+++ ++ L E KISDF +N N
Sbjct: 118 VY----LHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLP 171
Query: 591 SAAMELLETSAVDLES-NVYSFGTILFEMITGRISYSIENGSLENWAS 637
A ELL+ E +V+S G +L M+ G + + + S + ++
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSXQEYSD 219
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 84/206 (40%), Gaps = 28/206 (13%)
Query: 487 HKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLE 546
H++ V G+ E+++ F +V E SL E LH + + R + + C +
Sbjct: 98 HQHVVGFHGFFEDND-FV-FVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGC-Q 153
Query: 547 HMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT---------AAKTGSAAMELL 597
++H+ + HR+L+ +++L ED KI DF A E+L
Sbjct: 154 YLHRNR--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVL 211
Query: 598 ETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSF 657
E +V+S G I++ ++ G+ + E L+ K E + ++P S
Sbjct: 212 SKKGHSFEVDVWSIGCIMYTLLVGKPPF--ETSCLKETYLRIKKNEYSIPKHINPVAASL 269
Query: 658 QENVLEELLVVIKNCVHPDPKQRPSM 683
+ +L+ DP RP++
Sbjct: 270 IQKMLQT-----------DPTARPTI 284
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 84/206 (40%), Gaps = 28/206 (13%)
Query: 487 HKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLE 546
H++ V G+ E+++ F +V E SL E LH + + R + + C +
Sbjct: 100 HQHVVGFHGFFEDND-FV-FVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGC-Q 155
Query: 547 HMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT---------AAKTGSAAMELL 597
++H+ + HR+L+ +++L ED KI DF A E+L
Sbjct: 156 YLHRNR--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVL 213
Query: 598 ETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSF 657
E +V+S G I++ ++ G+ + E L+ K E + ++P S
Sbjct: 214 SKKGHSFEVDVWSIGCIMYTLLVGKPPF--ETSCLKETYLRIKKNEYSIPKHINPVAASL 271
Query: 658 QENVLEELLVVIKNCVHPDPKQRPSM 683
+ +L+ DP RP++
Sbjct: 272 IQKMLQT-----------DPTARPTI 286
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 101/252 (40%), Gaps = 44/252 (17%)
Query: 432 IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFV 491
IGS + G V Y L V I S +++ + + +R+ + + VNHKN +
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT----HAKRAYRELV-LMKCVNHKNII 86
Query: 492 NLIGYCEEDEPFTRMMVFEYSPNGSL--FEHLHIQEAEHLDWAMRLRIAM-----GMAYC 544
L+ ++P SL F+ ++I E +D + I M M+Y
Sbjct: 87 GLLNV--------------FTPQKSLEEFQDVYIV-MELMDANLSQVIQMELDHERMSYL 131
Query: 545 LEHM-----HQLTPPIAHRNLQSSSIYLTEDYAAKISDF--------SFWNNTTAAKTGS 591
L M H + I HR+L+ S+I + D KI DF SF
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYY 191
Query: 592 AAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENW--ASEYLKGEQP-LKD 648
A E++ +++S G I+ EMI G + + ++ W E L P
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFP-GTDHIDQWNKVIEQLGTPSPEFMK 250
Query: 649 IVDPTLKSFQEN 660
+ PT++++ EN
Sbjct: 251 KLQPTVRTYVEN 262
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 95/229 (41%), Gaps = 36/229 (15%)
Query: 486 NHKNFVNLIGYCEEDEPFTRMMVF-EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYC 544
+H N VNL+G C + P +MV E+ G+L +L + E + + +
Sbjct: 80 HHLNVVNLLGACTK--PGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 137
Query: 545 LEHMHQLTPPIA------------HRNLQSSSIYLTEDYAAKISDFSF----WNNTTAAK 588
LEH+ + +A HR+L + +I L+E KI DF + + +
Sbjct: 138 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 197
Query: 589 TGSA-------AMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLK 641
G A A E + ++S+V+SFG +L+E+ + + S G +
Sbjct: 198 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS--LGASPYPGVKID------- 248
Query: 642 GEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKL 690
E+ + + + T + E+ + +C H +P QRP+ + L
Sbjct: 249 -EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/218 (20%), Positives = 90/218 (41%), Gaps = 28/218 (12%)
Query: 420 ELEAACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKI 479
E++ + +IG+ G G V +G L + + + +++ +F +
Sbjct: 12 EIDVSYVKIEEVIGA---GEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEA 68
Query: 480 DTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEH--LDWAMRLR- 536
+ + H N + L G P M++ E+ NG+L L + + + + LR
Sbjct: 69 SIMGQFEHPNIIRLEGVVTNSMPV--MILTEFMENGALDSFLRLNDGQFTVIQLVGMLRG 126
Query: 537 IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF-----WNNTTAAKTGS 591
IA GM Y E + HR+L + +I + + K+SDF N++ +T S
Sbjct: 127 IASGMRYLAEMSY------VHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSS 180
Query: 592 ---------AAMELLETSAVDLESNVYSFGTILFEMIT 620
A E + S+ +S+G +++E+++
Sbjct: 181 LGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMS 218
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 101/252 (40%), Gaps = 44/252 (17%)
Query: 432 IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFV 491
IGS + G V Y L V I S +++ + + +R+ + + VNHKN +
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT----HAKRAYRELV-LMKCVNHKNII 86
Query: 492 NLIGYCEEDEPFTRMMVFEYSPNGSL--FEHLHIQEAEHLDWAMRLRIAMG-----MAYC 544
L+ ++P SL F+ ++I E +D + I M M+Y
Sbjct: 87 GLLNV--------------FTPQKSLEEFQDVYIV-MELMDANLSQVIQMELDHERMSYL 131
Query: 545 LEHM-----HQLTPPIAHRNLQSSSIYLTEDYAAKISDF--------SFWNNTTAAKTGS 591
L M H + I HR+L+ S+I + D KI DF SF
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYY 191
Query: 592 AAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENW--ASEYLKGEQP-LKD 648
A E++ +++S G I+ EMI G + + ++ W E L P
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFP-GTDHIDQWNKVIEQLGTPSPEFMK 250
Query: 649 IVDPTLKSFQEN 660
+ PT++++ EN
Sbjct: 251 KLQPTVRTYVEN 262
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 95/229 (41%), Gaps = 36/229 (15%)
Query: 486 NHKNFVNLIGYCEEDEPFTRMMVF-EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYC 544
+H N VNL+G C + P +MV E+ G+L +L + E + + +
Sbjct: 80 HHLNVVNLLGACTK--PGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 137
Query: 545 LEHMHQLTPPIA------------HRNLQSSSIYLTEDYAAKISDFSF----WNNTTAAK 588
LEH+ + +A HR+L + +I L+E KI DF + + +
Sbjct: 138 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 197
Query: 589 TGSA-------AMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLK 641
G A A E + ++S+V+SFG +L+E+ + + S G +
Sbjct: 198 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS--LGASPYPGVKID------- 248
Query: 642 GEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKL 690
E+ + + + T + E+ + +C H +P QRP+ + L
Sbjct: 249 -EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 79/188 (42%), Gaps = 25/188 (13%)
Query: 453 EIAVTSTSVKSRADWSKNLESQFR----KKIDTLSKVN-HKNFVNLIGYCEEDEPFTRMM 507
E AV V +S + R K++D L KV+ H N + L E + F +
Sbjct: 31 EYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFF--FL 88
Query: 508 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYL 567
VF+ G LF++L E L +I + + +H+L I HR+L+ +I L
Sbjct: 89 VFDLMKKGELFDYL--TEKVTLSEKETRKIMRALLEVICALHKLN--IVHRDLKPENILL 144
Query: 568 TEDYAAKISDFSFWNN--------TTAAKTGSAAMELLETSAVD------LESNVYSFGT 613
+D K++DF F A E++E S D E +++S G
Sbjct: 145 DDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGV 204
Query: 614 ILFEMITG 621
I++ ++ G
Sbjct: 205 IMYTLLAG 212
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 97/252 (38%), Gaps = 44/252 (17%)
Query: 432 IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFV 491
IGS + G V Y L V I S +++ + K+ VNHKN +
Sbjct: 32 IGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKV-----VNHKNII 86
Query: 492 NLIGYCEEDEPFTRMMVFEYSPNGSL--FEHLHIQEAEHLDWAMRLRIAM-----GMAYC 544
L+ ++P SL F+ ++I E +D + I M M+Y
Sbjct: 87 GLLNV--------------FTPQKSLEEFQDVYIV-MELMDANLSQVIQMELDHERMSYL 131
Query: 545 LEHM-----HQLTPPIAHRNLQSSSIYLTEDYAAKISDF--------SFWNNTTAAKTGS 591
L M H + I HR+L+ S+I + D KI DF SF
Sbjct: 132 LYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYY 191
Query: 592 AAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENW--ASEYLKGEQP-LKD 648
A E++ +++S G I+ EMI G + + ++ W E L P
Sbjct: 192 RAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFP-GTDHIDQWNKVIEQLGTPSPEFMK 250
Query: 649 IVDPTLKSFQEN 660
+ PT++++ EN
Sbjct: 251 KLQPTVRTYVEN 262
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 97/252 (38%), Gaps = 44/252 (17%)
Query: 432 IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFV 491
IGS + G V Y L V I S +++ + K+ VNHKN +
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKV-----VNHKNII 86
Query: 492 NLIGYCEEDEPFTRMMVFEYSPNGSL--FEHLHIQEAEHLDWAMRLRIAMG-----MAYC 544
L+ ++P SL F+ ++I E +D + I M M+Y
Sbjct: 87 GLLNV--------------FTPQKSLEEFQDVYIV-MELMDANLSQVIQMELDHERMSYL 131
Query: 545 LEHM-----HQLTPPIAHRNLQSSSIYLTEDYAAKISDF--------SFWNNTTAAKTGS 591
L M H + I HR+L+ S+I + D KI DF SF
Sbjct: 132 LYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYY 191
Query: 592 AAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENW--ASEYLKGEQP-LKD 648
A E++ +++S G I+ EMI G + + ++ W E L P
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFP-GTDHIDQWNKVIEQLGTPSPEFMK 250
Query: 649 IVDPTLKSFQEN 660
+ PT++++ EN
Sbjct: 251 KLQPTVRTYVEN 262
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 101/252 (40%), Gaps = 44/252 (17%)
Query: 432 IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFV 491
IGS + G V Y L V I S +++ + + +R+ + + VNHKN +
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT----HAKRAYRELV-LMKCVNHKNII 86
Query: 492 NLIGYCEEDEPFTRMMVFEYSPNGSL--FEHLHIQEAEHLDWAMRLRIAMG-----MAYC 544
L+ ++P SL F+ ++I E +D + I M M+Y
Sbjct: 87 GLLNV--------------FTPQKSLEEFQDVYIV-MELMDANLCQVIQMELDHERMSYL 131
Query: 545 LEHM-----HQLTPPIAHRNLQSSSIYLTEDYAAKISDF--------SFWNNTTAAKTGS 591
L M H + I HR+L+ S+I + D KI DF SF
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYY 191
Query: 592 AAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDI-- 649
A E++ +++S G I+ EMI G + + ++ W + P +
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFP-GTDHIDQWNKVIEQLGTPCPEFMK 250
Query: 650 -VDPTLKSFQEN 660
+ PT++++ EN
Sbjct: 251 KLQPTVRTYVEN 262
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 89/213 (41%), Gaps = 35/213 (16%)
Query: 426 EDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV 485
EDF IIG DG G VYK + E +V + + + LE + +ID L+
Sbjct: 36 EDFWEIIGELGDGAFGKVYK---AQNKETSVLAAAKVIDTKSEEELED-YMVEIDILASC 91
Query: 486 NHKNFVNLIG--YCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAY 543
+H N V L+ Y E + ++ E+ G++ +A L+ L +
Sbjct: 92 DHPNIVKLLDAFYYENN----LWILIEFCAGGAV-------DAVMLELERPLTESQIQVV 140
Query: 544 CLEHMHQLT----PPIAHRNLQSSSIYLTEDYAAKISDF--SFWNNTTAAKTGS------ 591
C + + L I HR+L++ +I T D K++DF S N + S
Sbjct: 141 CKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFIGTPY 200
Query: 592 ---AAMELLETSA---VDLESNVYSFGTILFEM 618
+ + ETS D +++V+S G L EM
Sbjct: 201 WMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 90/219 (41%), Gaps = 15/219 (6%)
Query: 420 ELEAACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKI 479
++ C + ++G G V V K T ++ +I K+ + + + +
Sbjct: 13 KIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAER 72
Query: 480 DTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAM 539
+ L +V H V+LI + ++ EY G LF L + D A +
Sbjct: 73 NILEEVKHPFIVDLIYAFQTGGKL--YLILEYLSGGELFMQLEREGIFMEDTACFYLAEI 130
Query: 540 GMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGS-------- 591
MA L H+HQ I +R+L+ +I L K++DF + T +
Sbjct: 131 SMA--LGHLHQ--KGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCGTIE 186
Query: 592 -AAMELLETSAVDLESNVYSFGTILFEMITGRISYSIEN 629
A E+L S + + +S G ++++M+TG ++ EN
Sbjct: 187 YMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGEN 225
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 90/219 (41%), Gaps = 15/219 (6%)
Query: 420 ELEAACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKI 479
++ C + ++G G V V K T ++ +I K+ + + + +
Sbjct: 13 KIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAER 72
Query: 480 DTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAM 539
+ L +V H V+LI + ++ EY G LF L + D A +
Sbjct: 73 NILEEVKHPFIVDLIYAFQTGGKL--YLILEYLSGGELFMQLEREGIFMEDTACFYLAEI 130
Query: 540 GMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGS-------- 591
MA L H+HQ I +R+L+ +I L K++DF + T +
Sbjct: 131 SMA--LGHLHQ--KGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIE 186
Query: 592 -AAMELLETSAVDLESNVYSFGTILFEMITGRISYSIEN 629
A E+L S + + +S G ++++M+TG ++ EN
Sbjct: 187 YMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGEN 225
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 101/252 (40%), Gaps = 44/252 (17%)
Query: 432 IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFV 491
IGS + G V Y L V I S +++ + + +R+ + + VNHKN +
Sbjct: 33 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT----HAKRAYRELV-LMKCVNHKNII 87
Query: 492 NLIGYCEEDEPFTRMMVFEYSPNGSL--FEHLHIQEAEHLDWAMRLRIAMG-----MAYC 544
L+ ++P SL F+ ++I E +D + I M M+Y
Sbjct: 88 GLLNV--------------FTPQKSLEEFQDVYIV-MELMDANLCQVIQMELDHERMSYL 132
Query: 545 LEHM-----HQLTPPIAHRNLQSSSIYLTEDYAAKISDF--------SFWNNTTAAKTGS 591
L M H + I HR+L+ S+I + D KI DF SF
Sbjct: 133 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYY 192
Query: 592 AAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDI-- 649
A E++ +++S G I+ EMI G + + ++ W + P +
Sbjct: 193 RAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFP-GTDHIDQWNKVIEQLGTPCPEFMK 251
Query: 650 -VDPTLKSFQEN 660
+ PT++++ EN
Sbjct: 252 KLQPTVRTYVEN 263
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 79/188 (42%), Gaps = 25/188 (13%)
Query: 453 EIAVTSTSVKSRADWSKNLESQFR----KKIDTLSKVN-HKNFVNLIGYCEEDEPFTRMM 507
E AV V +S + R K++D L KV+ H N + L E + F +
Sbjct: 44 EYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFF--FL 101
Query: 508 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYL 567
VF+ G LF++L E L +I + + +H+L I HR+L+ +I L
Sbjct: 102 VFDLMKKGELFDYL--TEKVTLSEKETRKIMRALLEVICALHKLN--IVHRDLKPENILL 157
Query: 568 TEDYAAKISDFSFWNN--------TTAAKTGSAAMELLETSAVD------LESNVYSFGT 613
+D K++DF F A E++E S D E +++S G
Sbjct: 158 DDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGV 217
Query: 614 ILFEMITG 621
I++ ++ G
Sbjct: 218 IMYTLLAG 225
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 84/206 (40%), Gaps = 28/206 (13%)
Query: 487 HKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLE 546
H++ V G+ E+++ F +V E SL E LH + + R + + C +
Sbjct: 74 HQHVVGFHGFFEDND-FV-FVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGC-Q 129
Query: 547 HMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF---------WNNTTAAKTGSAAMELL 597
++H+ + HR+L+ +++L ED KI DF A E+L
Sbjct: 130 YLHRNR--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVL 187
Query: 598 ETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSF 657
E +V+S G I++ ++ G+ + E L+ K E + ++P S
Sbjct: 188 SKKGHSFEVDVWSIGCIMYTLLVGKPPF--ETSCLKETYLRIKKNEYSIPKHINPVAASL 245
Query: 658 QENVLEELLVVIKNCVHPDPKQRPSM 683
+ +L+ DP RP++
Sbjct: 246 IQKMLQT-----------DPTARPTI 260
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 101/252 (40%), Gaps = 44/252 (17%)
Query: 432 IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFV 491
IGS + G V Y L V I S +++ + + +R+ + + VNHKN +
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT----HAKRAYRELV-LMKCVNHKNII 86
Query: 492 NLIGYCEEDEPFTRMMVFEYSPNGSL--FEHLHIQEAEHLDWAMRLRIAMG-----MAYC 544
L+ ++P SL F+ ++I E +D + I M M+Y
Sbjct: 87 GLLNV--------------FTPQKSLEEFQDVYIV-MELMDANLCQVIQMELDHERMSYL 131
Query: 545 LEHM-----HQLTPPIAHRNLQSSSIYLTEDYAAKISDF--------SFWNNTTAAKTGS 591
L M H + I HR+L+ S+I + D KI DF SF
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYY 191
Query: 592 AAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENW--ASEYLKGEQP-LKD 648
A E++ +++S G I+ EMI G + + ++ W E L P
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFP-GTDHIDQWNKVIEQLGTPSPEFMK 250
Query: 649 IVDPTLKSFQEN 660
+ PT++++ EN
Sbjct: 251 KLQPTVRTYVEN 262
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 89/213 (41%), Gaps = 35/213 (16%)
Query: 426 EDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV 485
EDF IIG DG G VYK + E +V + + + LE + +ID L+
Sbjct: 36 EDFWEIIGELGDGAFGKVYK---AQNKETSVLAAAKVIDTKSEEELED-YMVEIDILASC 91
Query: 486 NHKNFVNLIG--YCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAY 543
+H N V L+ Y E + ++ E+ G++ +A L+ L +
Sbjct: 92 DHPNIVKLLDAFYYENN----LWILIEFCAGGAV-------DAVMLELERPLTESQIQVV 140
Query: 544 CLEHMHQLT----PPIAHRNLQSSSIYLTEDYAAKISDFSF-WNNTTAAKTG-------- 590
C + + L I HR+L++ +I T D K++DF NT +
Sbjct: 141 CKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFIGTPY 200
Query: 591 --SAAMELLETSA---VDLESNVYSFGTILFEM 618
+ + + ETS D +++V+S G L EM
Sbjct: 201 WMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 102/268 (38%), Gaps = 41/268 (15%)
Query: 435 FSDGTVGTVYKG-TLSSGVEIAVTSTSVKSRADWSKNLES-QFRKKIDTLSKVN----HK 488
G GTV+ G L+ +++A+ WS +S ++ L KV H
Sbjct: 39 LGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHP 98
Query: 489 NFVNLIGYCEEDEPFTRMMVFEYS-PNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEH 547
+ L+ + E E F M+V E P LF++ I E L + ++H
Sbjct: 99 GVIRLLDWFETQEGF--MLVLERPLPAQDLFDY--ITEKGPLGEGPSRCFFGQVVAAIQH 154
Query: 548 MHQLTPPIAHRNLQSSSIYLT-EDYAAKISDFSF--------WNNTTAAKTGSAAMELLE 598
H + HR+++ +I + AK+ DF + + + S +
Sbjct: 155 CHSRG--VVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYTDFDGTRVYSPPEWISR 212
Query: 599 TSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 658
L + V+S G +L++M+ G I + + E L+ E F
Sbjct: 213 HQYHALPATVWSLGILLYDMVCGDIPFERDQ--------EILEAEL-----------HFP 253
Query: 659 ENVLEELLVVIKNCVHPDPKQRPSMRGI 686
+V + +I+ C+ P P RPS+ I
Sbjct: 254 AHVSPDCCALIRRCLAPKPSSRPSLEEI 281
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 59/122 (48%), Gaps = 14/122 (11%)
Query: 536 RIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN--TTAAKTGSA- 592
+I + L H+ + I HR+++ S+I L K+ DF + AKT A
Sbjct: 129 KITLATVKALNHLKE-NLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAG 187
Query: 593 -----AMELLETSA----VDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGE 643
A E ++ SA D+ S+V+S G L+E+ TGR Y N S+ + ++ +KG+
Sbjct: 188 CRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWN-SVFDQLTQVVKGD 246
Query: 644 QP 645
P
Sbjct: 247 PP 248
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/281 (21%), Positives = 112/281 (39%), Gaps = 41/281 (14%)
Query: 438 GTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV----NHKNFVNL 493
G G V + + G++ T +V + S+ R + L + +H N VNL
Sbjct: 40 GAFGQVIEAD-AFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 98
Query: 494 IGYC-EEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLT 552
+G C + P M++ E+ G+L +L + E + + LEH+ +
Sbjct: 99 LGACTKPGGPL--MVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYS 156
Query: 553 PPIA------------HRNLQSSSIYLTEDYAAKISDFSF----WNNTTAAKTGSA---- 592
+A HR+L + +I L+E KI DF + + + G A
Sbjct: 157 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 216
Query: 593 ---AMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDI 649
A E + ++S+V+SFG +L+E+ + + S G + E+ + +
Sbjct: 217 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS--LGASPYPGVKID--------EEFCRRL 266
Query: 650 VDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKL 690
+ T + E+ + +C H +P QRP+ + L
Sbjct: 267 KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 307
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/291 (20%), Positives = 121/291 (41%), Gaps = 38/291 (13%)
Query: 432 IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFV 491
IGS + G V + L G+ +AV S R ++ + +++ L VNHKN +
Sbjct: 30 IGSGAQGIVCAAFDTVL--GINVAVKKLS---RPFQNQTHAKRAYRELVLLKCVNHKNII 84
Query: 492 NLIGYCEED---EPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHM 548
+L+ E F + + + +L + +H++ LD + M ++H+
Sbjct: 85 SLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHME----LDHERMSYLLYQMLCGIKHL 140
Query: 549 HQLTPPIAHRNLQSSSIYLTEDYAAKISDF--------SFWNNTTAAKTGSAAMELLETS 600
H + I HR+L+ S+I + D KI DF +F A E++
Sbjct: 141 H--SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFMMTPYVVTRYYRAPEVILGM 198
Query: 601 AVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDI---VDPTLKSF 657
+++S G I+ E++ G + + ++ W + P + + PT++++
Sbjct: 199 GYKENVDIWSVGCIMGELVKGSVIFQ-GTDHIDQWNKVIEQLGTPSAEFMAALQPTVRNY 257
Query: 658 QEN-------VLEELLVVIKNCVHPDPKQRPSMRGIAAK--LKEITAMEPD 699
EN EEL + + P +R ++ A+ L ++ ++PD
Sbjct: 258 VENRPAYPGIAFEELF---PDWIFPSESERDKIKTSQARDLLSKMLVIDPD 305
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 94/229 (41%), Gaps = 36/229 (15%)
Query: 486 NHKNFVNLIGYCEE-DEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYC 544
+H N VNL+G C + P M++ E+ G+L +L + E + + +
Sbjct: 80 HHLNVVNLLGACTKPGGPL--MVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 137
Query: 545 LEHMHQLTPPIA------------HRNLQSSSIYLTEDYAAKISDFSFWNNTT----AAK 588
LEH+ + +A HR+L + +I L+E KI DF + +
Sbjct: 138 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 197
Query: 589 TGSA-------AMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLK 641
G A A E + ++S+V+SFG +L+E+ + + S G +
Sbjct: 198 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS--LGASPYPGVKID------- 248
Query: 642 GEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKL 690
E+ + + + T + E+ + +C H +P QRP+ + L
Sbjct: 249 -EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/281 (21%), Positives = 112/281 (39%), Gaps = 41/281 (14%)
Query: 438 GTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV----NHKNFVNL 493
G G V + + G++ T +V + S+ R + L + +H N VNL
Sbjct: 38 GAFGQVIEAD-AFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 96
Query: 494 IGYC-EEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLT 552
+G C + P M++ E+ G+L +L + E + + + LEH+ +
Sbjct: 97 LGACTKPGGPL--MVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 553 PPIA------------HRNLQSSSIYLTEDYAAKISDFSFWNNTT----AAKTGSA---- 592
+A HR+L + +I L+E KI DF + + G A
Sbjct: 155 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPL 214
Query: 593 ---AMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDI 649
A E + ++S+V+SFG +L+E+ + + S G + E+ + +
Sbjct: 215 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS--LGASPYPGVKID--------EEFCRRL 264
Query: 650 VDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKL 690
+ T + E+ + +C H +P QRP+ + L
Sbjct: 265 KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 94/229 (41%), Gaps = 36/229 (15%)
Query: 486 NHKNFVNLIGYCEEDEPFTRMMVF-EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYC 544
+H N VNL+G C + P +MV E+ G+L +L + E + + +
Sbjct: 80 HHLNVVNLLGACTK--PGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 137
Query: 545 LEHMHQLTPPIA------------HRNLQSSSIYLTEDYAAKISDFSFWNNTT----AAK 588
LEH+ + +A HR+L + +I L+E KI DF + +
Sbjct: 138 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 197
Query: 589 TGSA-------AMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLK 641
G A A E + ++S+V+SFG +L+E+ + + S G +
Sbjct: 198 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS--LGASPYPGVKID------- 248
Query: 642 GEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKL 690
E+ + + + T + E+ + +C H +P QRP+ + L
Sbjct: 249 -EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 97/239 (40%), Gaps = 47/239 (19%)
Query: 438 GTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYC 497
G G+V +G + + V + + E R+ + ++++ V LIG C
Sbjct: 347 GNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMRE-AQIMHQLDNPYIVRLIGVC 405
Query: 498 EEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWA----MRLRIAMGMAYCLEHMHQLTP 553
+ + M+V E + G L + L + + E + + + +++MGM Y E
Sbjct: 406 QAE---ALMLVMEMAGGGPLHKFL-VGKREEIPVSNVAELLHQVSMGMKYLEEKN----- 456
Query: 554 PIAHRNLQSSSIYLTEDYAAKISDF----------SFWNNTTAAK--TGSAAMELLETSA 601
HRNL + ++ L + AKISDF S++ +A K A E +
Sbjct: 457 -FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRK 515
Query: 602 VDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQEN 660
S+V+S+G ++E +SY G++P K + P + +F E
Sbjct: 516 FSSRSDVWSYGVTMWEA----LSY----------------GQKPYKKMKGPEVMAFIEQ 554
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 95/243 (39%), Gaps = 55/243 (22%)
Query: 482 LSKVNHKNFVNLIGYCEEDEPFTRMMV-----------FEYSPNGSLFEHLH---IQEAE 527
L+ +NH+ V E F + M EY NG+L++ +H + +
Sbjct: 56 LASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQR 115
Query: 528 HLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN---- 583
W + +I ++Y +H + I HR+L+ +I++ E KI DF N
Sbjct: 116 DEYWRLFRQILEALSY----IH--SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRS 169
Query: 584 ------------------TTAAKTG-SAAMELLE-TSAVDLESNVYSFGTILFEMITGRI 623
T+A T A E+L+ T + + ++YS G I FEMI
Sbjct: 170 LDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI---- 225
Query: 624 SYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSM 683
Y G E + + L+ + F +N ++ +I+ + DP +RP
Sbjct: 226 -YPFSTG------MERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGA 278
Query: 684 RGI 686
R +
Sbjct: 279 RTL 281
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 85/204 (41%), Gaps = 26/204 (12%)
Query: 437 DGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIG 495
+GT G VYKG ++A D + + E + +++I+ L K +H+N G
Sbjct: 34 NGTYGQVYKGRHVKTGQLAAIKV-----MDVTGDEEEEIKQEINMLKKYSHHRNIATYYG 88
Query: 496 -YCEEDEPFTR---MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQL 551
+ +++ P +V E+ GS+ + + + L I + L H+HQ
Sbjct: 89 AFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH 148
Query: 552 TPPIAHRNLQSSSIYLTEDYAAKISDFSF---------WNNTTAAKTGSAAMELLET--- 599
+ HR+++ ++ LTE+ K+ DF NT A E++
Sbjct: 149 K--VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDEN 206
Query: 600 --SAVDLESNVYSFGTILFEMITG 621
+ D +S+++S G EM G
Sbjct: 207 PDATYDFKSDLWSLGITAIEMAEG 230
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/218 (20%), Positives = 89/218 (40%), Gaps = 28/218 (12%)
Query: 420 ELEAACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKI 479
E++ + +IG+ G G V +G L + + + +++ +F +
Sbjct: 10 EIDVSYVKIEEVIGA---GEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEA 66
Query: 480 DTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEH--LDWAMRLR- 536
+ + H N + L G P M++ E+ NG+L L + + + + LR
Sbjct: 67 SIMGQFEHPNIIRLEGVVTNSMPV--MILTEFMENGALDSFLRLNDGQFTVIQLVGMLRG 124
Query: 537 IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF-----WNNTTAAKTGS 591
IA GM Y E + HR+L + +I + + K+SDF N++ T S
Sbjct: 125 IASGMRYLAEMSY------VHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSS 178
Query: 592 ---------AAMELLETSAVDLESNVYSFGTILFEMIT 620
A E + S+ +S+G +++E+++
Sbjct: 179 LGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMS 216
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 86/204 (42%), Gaps = 25/204 (12%)
Query: 430 NIIGSFSDGTVGTVYKG-TLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHK 488
I+G DG G VYK +G A KS + LE + +I+ L+ +H
Sbjct: 14 EIVGELGDGAFGKVYKAKNKETGALAAAKVIETKS----EEELED-YIVEIEILATCDHP 68
Query: 489 NFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHM 548
V L+G D M+ E+ P G++ + + ++ L + M L +
Sbjct: 69 YIVKLLGAYYHDGKLWIMI--EFCPGGAV-DAIMLELDRGLTEPQIQVVCRQMLEALNFL 125
Query: 549 HQLTPPIAHRNLQSSSIYLTEDYAAKISDF--SFWNNTTAAKTGS------------AAM 594
H + I HR+L++ ++ +T + +++DF S N T K S
Sbjct: 126 H--SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMC 183
Query: 595 ELLETSAVDLESNVYSFGTILFEM 618
E ++ + D +++++S G L EM
Sbjct: 184 ETMKDTPYDYKADIWSLGITLIEM 207
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 99/252 (39%), Gaps = 44/252 (17%)
Query: 432 IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFV 491
IGS + G V Y L V I S +++ + +++ + VNHKN +
Sbjct: 34 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY-----RELVLMKCVNHKNII 88
Query: 492 NLIGYCEEDEPFTRMMVFEYSPNGSL--FEHLHIQEAEHLDWAMRLRIAM-----GMAYC 544
L+ ++P SL F+ ++I E +D + I M M+Y
Sbjct: 89 GLLNV--------------FTPQKSLEEFQDVYIV-MELMDANLCQVIQMELDHERMSYL 133
Query: 545 LEHM-----HQLTPPIAHRNLQSSSIYLTEDYAAKISDF--------SFWNNTTAAKTGS 591
L M H + I HR+L+ S+I + D KI DF SF
Sbjct: 134 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFVVTRYY 193
Query: 592 AAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDI-- 649
A E++ +++S G I+ EMI G + + ++ W + P +
Sbjct: 194 RAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFP-GTDHIDQWNKVIEQLGTPCPEFMK 252
Query: 650 -VDPTLKSFQEN 660
+ PT++++ EN
Sbjct: 253 KLQPTVRTYVEN 264
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 115/302 (38%), Gaps = 59/302 (19%)
Query: 430 NIIGSFSDGTVGTVYKGTLS------SGVEIAV-TSTSVKSRADWSKNLESQFRKKIDTL 482
+I G G VY+G +S S +++AV T V S D E F + +
Sbjct: 25 TLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD-----ELDFLMEALII 79
Query: 483 SKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAE--------HLDWAMR 534
SK NH+N V IG + P R ++ E G L L LD
Sbjct: 80 SKFNHQNIVRCIGVSLQSLP--RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 137
Query: 535 LR-IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLT---EDYAAKISDFSFWNNTTAA--- 587
R IA G Y LE H HR++ + + LT AKI DF + A
Sbjct: 138 ARDIACGCQY-LEENH-----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY 191
Query: 588 KTGSAAM--------ELLETSAVDLESNVYSFGTILFEMIT-GRISY-SIENGSLENWAS 637
+ G AM E +++ +SFG +L+E+ + G + Y S N + + +
Sbjct: 192 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVT 251
Query: 638 EYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAME 697
+ + P K+ P + ++ C P+ RP+ I ++ E +
Sbjct: 252 SGGRMDPP-KNCPGPVYR------------IMTQCWQHQPEDRPNFAIILERI-EYCTQD 297
Query: 698 PD 699
PD
Sbjct: 298 PD 299
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 63/298 (21%), Positives = 115/298 (38%), Gaps = 56/298 (18%)
Query: 434 SFSDGTVGTVYKGT---LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNF 490
S GT ++KG + ++ T +K +N F + +SK++HK+
Sbjct: 15 SLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHL 74
Query: 491 VNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQ 550
V G C + ++V E+ GSL +L + ++ +L +A +A + + +
Sbjct: 75 VLNYGVCVCGD--ENILVQEFVKFGSLDTYLK-KNKNCINILWKLEVAKQLAAAMHFLEE 131
Query: 551 LTPPIAHRNLQSSSIYLTEDYAAKISDFSFWN-------------NTTAAKTGSAAMELL 597
T + H N+ + +I L + K + F + + E +
Sbjct: 132 NT--LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPECI 189
Query: 598 ETSA-VDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKS 656
E ++L ++ +SFGT L+E+ +G G++PL +
Sbjct: 190 ENPKNLNLATDKWSFGTTLWEICSG--------------------GDKPLSALDSQRKLQ 229
Query: 657 FQENVLE-------ELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPDGATPKLSP 707
F E+ + EL +I NC+ +P RPS R I L + TP L P
Sbjct: 230 FYEDRHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLF-------TPDLVP 280
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 86/204 (42%), Gaps = 25/204 (12%)
Query: 430 NIIGSFSDGTVGTVYKG-TLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHK 488
I+G DG G VYK +G A KS + LE + +I+ L+ +H
Sbjct: 22 EIVGELGDGAFGKVYKAKNKETGALAAAKVIETKS----EEELED-YIVEIEILATCDHP 76
Query: 489 NFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHM 548
V L+G D M+ E+ P G++ + + ++ L + M L +
Sbjct: 77 YIVKLLGAYYHDGKLWIMI--EFCPGGAV-DAIMLELDRGLTEPQIQVVCRQMLEALNFL 133
Query: 549 HQLTPPIAHRNLQSSSIYLTEDYAAKISDF--SFWNNTTAAKTGS------------AAM 594
H + I HR+L++ ++ +T + +++DF S N T K S
Sbjct: 134 H--SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMC 191
Query: 595 ELLETSAVDLESNVYSFGTILFEM 618
E ++ + D +++++S G L EM
Sbjct: 192 ETMKDTPYDYKADIWSLGITLIEM 215
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 116/302 (38%), Gaps = 59/302 (19%)
Query: 430 NIIGSFSDGTVGTVYKGTLS------SGVEIAV-TSTSVKSRADWSKNLESQFRKKIDTL 482
+I G G VY+G +S S +++AV T V S D E F + +
Sbjct: 48 TLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD-----ELDFLMEALII 102
Query: 483 SKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAE--------HLDWAMR 534
SK+NH+N V IG + P R ++ E G L L LD
Sbjct: 103 SKLNHQNIVRCIGVSLQSLP--RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 160
Query: 535 LR-IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLT---EDYAAKISDFSFWNNTTAA--- 587
R IA G Y LE H HR++ + + LT AKI DF + A
Sbjct: 161 ARDIACGCQY-LEENH-----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY 214
Query: 588 KTGSAAM--------ELLETSAVDLESNVYSFGTILFEMIT-GRISY-SIENGSLENWAS 637
+ G AM E +++ +SFG +L+E+ + G + Y S N + + +
Sbjct: 215 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVT 274
Query: 638 EYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAME 697
+ + P K+ P + ++ C P+ RP+ I ++ E +
Sbjct: 275 SGGRMDPP-KNCPGPVYR------------IMTQCWQHQPEDRPNFAIILERI-EYCTQD 320
Query: 698 PD 699
PD
Sbjct: 321 PD 322
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 84/215 (39%), Gaps = 34/215 (15%)
Query: 470 NLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHL 529
N E+ +K+I L ++ HKN + L+ +E MV EY G E L
Sbjct: 48 NGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGM---------QEML 98
Query: 530 DWAMRLRIAMGMA---YC-----LEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF- 580
D R + A +C LE++H I H++++ ++ LT KIS
Sbjct: 99 DSVPEKRFPVCQAHGYFCQLIDGLEYLHSQG--IVHKDIKPGNLLLTTGGTLKISALGVA 156
Query: 581 -------WNNTTAAKTGSAAMELLETS-AVD----LESNVYSFGTILFEMITGRISYSIE 628
++T GS A + E + +D + +++S G L+ + TG Y E
Sbjct: 157 EALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGL--YPFE 214
Query: 629 NGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLE 663
++ KG + P L + +LE
Sbjct: 215 GDNIYKLFENIGKGSYAIPGDCGPPLSDLLKGMLE 249
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 101/243 (41%), Gaps = 26/243 (10%)
Query: 432 IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFV 491
IGS + G V Y L V I S +++ + + +R+ + + VNHKN +
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQT----HAKRAYRELV-LMKXVNHKNII 86
Query: 492 NLIGYCEED---EPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHM 548
+L+ E F + + + +L + + ++ LD + M ++H+
Sbjct: 87 SLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME----LDHERMSYLLYQMLXGIKHL 142
Query: 549 HQLTPPIAHRNLQSSSIYLTEDYAAKISDF--------SFWNNTTAAKTGSAAMELLETS 600
H + I HR+L+ S+I + D KI DF SF A E++
Sbjct: 143 H--SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM 200
Query: 601 AVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDI---VDPTLKSF 657
+++S G I+ EM+ +I + + ++ W + P + + PT++++
Sbjct: 201 GYKENVDIWSVGCIMGEMVRHKILFPGRD-YIDQWNKVIEQLGTPCPEFMKKLQPTVRNY 259
Query: 658 QEN 660
EN
Sbjct: 260 VEN 262
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 56/138 (40%), Gaps = 22/138 (15%)
Query: 555 IAHRNLQSSSIYLTEDYAAKISDFSF---------WNNTTAAKTGSAAMELLETSAVDLE 605
+ HR+L+ +++L +D KI DF T A E+L E
Sbjct: 163 VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLCKKGHSFE 222
Query: 606 SNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEEL 665
+++S G IL+ ++ G+ + E L+ K E + ++P +
Sbjct: 223 VDIWSLGCILYTLLVGKPPF--ETSCLKETYIRIKKNEYSVPRHINPVASA--------- 271
Query: 666 LVVIKNCVHPDPKQRPSM 683
+I+ +H DP RPS+
Sbjct: 272 --LIRRMLHADPTLRPSV 287
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 102/252 (40%), Gaps = 44/252 (17%)
Query: 432 IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFV 491
IGS + G V Y L V I S +++ + + +R+ + + VNHKN +
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT----HAKRAYRELV-LMKCVNHKNII 86
Query: 492 NLIGYCEEDEPFTRMMVFEYSPNGSL--FEHLHIQEAEHLDWAMRLRIAMG-----MAYC 544
L+ ++P SL F+ ++I E +D + I M M+Y
Sbjct: 87 GLLNV--------------FTPQKSLEEFQDVYIV-MELMDANLCQVIQMELDHERMSYL 131
Query: 545 LEHM-----HQLTPPIAHRNLQSSSIYLTEDYAAKISDF--------SFWNNTTAAKTGS 591
L M H + I HR+L+ S+I + D KI DF SF
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYY 191
Query: 592 AAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDI-- 649
A E++ +++S G I+ EM+ +I + + ++ W + P +
Sbjct: 192 RAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRD-YIDQWNKVIEQLGTPCPEFMK 250
Query: 650 -VDPTLKSFQEN 660
+ PT++++ EN
Sbjct: 251 KLQPTVRTYVEN 262
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 115/302 (38%), Gaps = 59/302 (19%)
Query: 430 NIIGSFSDGTVGTVYKGTLS------SGVEIAV-TSTSVKSRADWSKNLESQFRKKIDTL 482
+I G G VY+G +S S +++AV T V S D E F + +
Sbjct: 33 TLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD-----ELDFLMEALII 87
Query: 483 SKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAE--------HLDWAMR 534
SK NH+N V IG + P R ++ E G L L LD
Sbjct: 88 SKFNHQNIVRCIGVSLQSLP--RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 145
Query: 535 LR-IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLT---EDYAAKISDFSFWNNTTAA--- 587
R IA G Y LE H HR++ + + LT AKI DF + A
Sbjct: 146 ARDIACGCQY-LEENH-----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY 199
Query: 588 KTGSAAM--------ELLETSAVDLESNVYSFGTILFEMIT-GRISY-SIENGSLENWAS 637
+ G AM E +++ +SFG +L+E+ + G + Y S N + + +
Sbjct: 200 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVT 259
Query: 638 EYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAME 697
+ + P K+ P + ++ C P+ RP+ I ++ E +
Sbjct: 260 SGGRMDPP-KNCPGPVYR------------IMTQCWQHQPEDRPNFAIILERI-EYCTQD 305
Query: 698 PD 699
PD
Sbjct: 306 PD 307
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 103/252 (40%), Gaps = 44/252 (17%)
Query: 432 IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFV 491
IGS + G V Y L V I S +++ + + +R+ + + VNHKN +
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQT----HAKRAYRELV-LMKXVNHKNII 86
Query: 492 NLIGYCEEDEPFTRMMVFEYSPNGSL--FEHLHIQEAEHLDWAMRLRIAM-----GMAYC 544
+L+ ++P +L F+ +++ E +D + I M M+Y
Sbjct: 87 SLLNV--------------FTPQKTLEEFQDVYLV-MELMDANLXQVIQMELDHERMSYL 131
Query: 545 LEHM-----HQLTPPIAHRNLQSSSIYLTEDYAAKISDF--------SFWNNTTAAKTGS 591
L M H + I HR+L+ S+I + D KI DF SF
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYY 191
Query: 592 AAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDI-- 649
A E++ +++S G I+ EM+ +I + + ++ W + P +
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRD-YIDQWNKVIEQLGTPCPEFMK 250
Query: 650 -VDPTLKSFQEN 660
+ PT++++ EN
Sbjct: 251 KLQPTVRNYVEN 262
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 102/252 (40%), Gaps = 44/252 (17%)
Query: 432 IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFV 491
IGS + G V Y L V I S +++ + + +R+ + + VNHKN +
Sbjct: 37 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT----HAKRAYRELV-LMKCVNHKNII 91
Query: 492 NLIGYCEEDEPFTRMMVFEYSPNGSL--FEHLHIQEAEHLDWAMRLRIAM-----GMAYC 544
L+ ++P SL F+ ++I E +D + I M M+Y
Sbjct: 92 GLLNV--------------FTPQKSLEEFQDVYIV-MELMDANLCQVIQMELDHERMSYL 136
Query: 545 LEHM-----HQLTPPIAHRNLQSSSIYLTEDYAAKISDF--------SFWNNTTAAKTGS 591
L M H + I HR+L+ S+I + D KI DF SF
Sbjct: 137 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYY 196
Query: 592 AAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDI-- 649
A E++ +++S G I+ EM+ +I + + ++ W + P +
Sbjct: 197 RAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRD-YIDQWNKVIEQLGTPCPEFMK 255
Query: 650 -VDPTLKSFQEN 660
+ PT++++ EN
Sbjct: 256 KLQPTVRTYVEN 267
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 116/302 (38%), Gaps = 59/302 (19%)
Query: 430 NIIGSFSDGTVGTVYKGTLS------SGVEIAV-TSTSVKSRADWSKNLESQFRKKIDTL 482
+I G G VY+G +S S +++AV T V S D E F + +
Sbjct: 34 TLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD-----ELDFLMEALII 88
Query: 483 SKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAE--------HLDWAMR 534
SK+NH+N V IG + P R ++ E G L L LD
Sbjct: 89 SKLNHQNIVRCIGVSLQSLP--RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 146
Query: 535 LR-IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLT---EDYAAKISDFSFWNNTTAA--- 587
R IA G Y LE H HR++ + + LT AKI DF + A
Sbjct: 147 ARDIACGCQY-LEENH-----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY 200
Query: 588 KTGSAAM--------ELLETSAVDLESNVYSFGTILFEMIT-GRISY-SIENGSLENWAS 637
+ G AM E +++ +SFG +L+E+ + G + Y S N + + +
Sbjct: 201 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVT 260
Query: 638 EYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAME 697
+ + P K+ P + ++ C P+ RP+ I ++ E +
Sbjct: 261 SGGRMDPP-KNCPGPVYR------------IMTQCWQHQPEDRPNFAIILERI-EYCTQD 306
Query: 698 PD 699
PD
Sbjct: 307 PD 308
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 102/252 (40%), Gaps = 44/252 (17%)
Query: 432 IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFV 491
IGS + G V Y L V I S +++ + + +R+ + + VNHKN +
Sbjct: 26 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT----HAKRAYRELV-LMKCVNHKNII 80
Query: 492 NLIGYCEEDEPFTRMMVFEYSPNGSL--FEHLHIQEAEHLDWAMRLRIAMG-----MAYC 544
L+ ++P SL F+ ++I E +D + I M M+Y
Sbjct: 81 GLLNV--------------FTPQKSLEEFQDVYIV-MELMDANLCQVIQMELDHERMSYL 125
Query: 545 LEHM-----HQLTPPIAHRNLQSSSIYLTEDYAAKISDF--------SFWNNTTAAKTGS 591
L M H + I HR+L+ S+I + D KI DF SF
Sbjct: 126 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYY 185
Query: 592 AAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDI-- 649
A E++ +++S G I+ EM+ +I + + ++ W + P +
Sbjct: 186 RAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRD-YIDQWNKVIEQLGTPCPEFMK 244
Query: 650 -VDPTLKSFQEN 660
+ PT++++ EN
Sbjct: 245 KLQPTVRTYVEN 256
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 115/302 (38%), Gaps = 59/302 (19%)
Query: 430 NIIGSFSDGTVGTVYKGTLS------SGVEIAV-TSTSVKSRADWSKNLESQFRKKIDTL 482
+I G G VY+G +S S +++AV T V S D E F + +
Sbjct: 33 TLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD-----ELDFLMEALII 87
Query: 483 SKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAE--------HLDWAMR 534
SK NH+N V IG + P R ++ E G L L LD
Sbjct: 88 SKFNHQNIVRCIGVSLQSLP--RFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 145
Query: 535 LR-IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLT---EDYAAKISDFSFWNNTTAA--- 587
R IA G Y LE H HR++ + + LT AKI DF + A
Sbjct: 146 ARDIACGCQY-LEENH-----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY 199
Query: 588 KTGSAAM--------ELLETSAVDLESNVYSFGTILFEMIT-GRISY-SIENGSLENWAS 637
+ G AM E +++ +SFG +L+E+ + G + Y S N + + +
Sbjct: 200 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVT 259
Query: 638 EYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAME 697
+ + P K+ P + ++ C P+ RP+ I ++ E +
Sbjct: 260 SGGRMDPP-KNCPGPVYR------------IMTQCWQHQPEDRPNFAIILERI-EYCTQD 305
Query: 698 PD 699
PD
Sbjct: 306 PD 307
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 101/243 (41%), Gaps = 26/243 (10%)
Query: 432 IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFV 491
IGS + G V Y L V I S +++ + + +R+ + + VNHKN +
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQT----HAKRAYRELV-LMKXVNHKNII 86
Query: 492 NLIGYCEED---EPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHM 548
+L+ E F + + + +L + + ++ LD + M ++H+
Sbjct: 87 SLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME----LDHERMSYLLYQMLCGIKHL 142
Query: 549 HQLTPPIAHRNLQSSSIYLTEDYAAKISDF--------SFWNNTTAAKTGSAAMELLETS 600
H + I HR+L+ S+I + D KI DF SF A E++
Sbjct: 143 H--SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM 200
Query: 601 AVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDI---VDPTLKSF 657
+++S G I+ EM+ +I + + ++ W + P + + PT++++
Sbjct: 201 GYKENVDIWSVGCIMGEMVRHKILFPGRD-YIDQWNKVIEQLGTPCPEFMKKLQPTVRNY 259
Query: 658 QEN 660
EN
Sbjct: 260 VEN 262
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 87/217 (40%), Gaps = 29/217 (13%)
Query: 420 ELEAACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKI 479
E+ A D + GS + G V + G +G ++A+ R S+ + +++
Sbjct: 22 EVRAVYRDLQPV-GSGAYGAVCSAVDG--RTGAKVAIKKLY---RPFQSELFAKRAYREL 75
Query: 480 DTLSKVNHKNFVNLIGYCEEDEP------FTRMMVFEYSPNGSLFEHLHIQEAEHLDWAM 533
L + H+N + L+ DE F +M F + G L +H + E
Sbjct: 76 RLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGED------- 128
Query: 534 RLR-IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSA 592
R++ + M L ++H I HR+L+ ++ + ED KI DF + G
Sbjct: 129 RIQFLVYQMLKGLRYIH--AAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXV 186
Query: 593 AMELLETSAVDLE-------SNVYSFGTILFEMITGR 622
V L +++S G I+ EMITG+
Sbjct: 187 VTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 101/243 (41%), Gaps = 26/243 (10%)
Query: 432 IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFV 491
IGS + G V Y L V I S +++ + + +R+ + + VNHKN +
Sbjct: 25 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQT----HAKRAYRELV-LMKCVNHKNII 79
Query: 492 NLIGYCEED---EPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHM 548
+L+ E F + + + +L + + ++ LD + M ++H+
Sbjct: 80 SLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME----LDHERMSYLLYQMLXGIKHL 135
Query: 549 HQLTPPIAHRNLQSSSIYLTEDYAAKISDF--------SFWNNTTAAKTGSAAMELLETS 600
H + I HR+L+ S+I + D KI DF SF A E++
Sbjct: 136 H--SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM 193
Query: 601 AVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDI---VDPTLKSF 657
+++S G I+ EM+ +I + + ++ W + P + + PT++++
Sbjct: 194 GYKENVDIWSVGCIMGEMVRHKILFPGRD-YIDQWNKVIEQLGTPCPEFMKKLQPTVRNY 252
Query: 658 QEN 660
EN
Sbjct: 253 VEN 255
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 102/252 (40%), Gaps = 44/252 (17%)
Query: 432 IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFV 491
IGS + G V Y L V I S +++ + + +R+ + + VNHKN +
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT----HAKRAYRELV-LMKCVNHKNII 86
Query: 492 NLIGYCEEDEPFTRMMVFEYSPNGSL--FEHLHIQEAEHLDWAMRLRIAM-----GMAYC 544
L+ ++P SL F+ ++I E +D + I M M+Y
Sbjct: 87 GLLNV--------------FTPQKSLEEFQDVYIV-MELMDANLCQVIQMELDHERMSYL 131
Query: 545 LEHM-----HQLTPPIAHRNLQSSSIYLTEDYAAKISDF--------SFWNNTTAAKTGS 591
L M H + I HR+L+ S+I + D KI DF SF
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYY 191
Query: 592 AAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENW--ASEYLKGEQP-LKD 648
A E++ +++S G I+ EM+ +I + + ++ W E L P
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVCHKILFPGRD-YIDQWNKVIEQLGTPCPAFMK 250
Query: 649 IVDPTLKSFQEN 660
+ PT++++ EN
Sbjct: 251 KLQPTVRNYVEN 262
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 115/302 (38%), Gaps = 59/302 (19%)
Query: 430 NIIGSFSDGTVGTVYKGTLS------SGVEIAV-TSTSVKSRADWSKNLESQFRKKIDTL 482
+I G G VY+G +S S +++AV T V S D E F + +
Sbjct: 48 TLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQD-----ELDFLMEALII 102
Query: 483 SKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAE--------HLDWAMR 534
SK NH+N V IG + P R ++ E G L L LD
Sbjct: 103 SKFNHQNIVRCIGVSLQSLP--RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 160
Query: 535 LR-IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLT---EDYAAKISDFSFWNNTTAA--- 587
R IA G Y LE H HR++ + + LT AKI DF + A
Sbjct: 161 ARDIACGCQY-LEENH-----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY 214
Query: 588 KTGSAAM--------ELLETSAVDLESNVYSFGTILFEMIT-GRISY-SIENGSLENWAS 637
+ G AM E +++ +SFG +L+E+ + G + Y S N + + +
Sbjct: 215 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVT 274
Query: 638 EYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAME 697
+ + P K+ P + ++ C P+ RP+ I ++ E +
Sbjct: 275 SGGRMDPP-KNCPGPVYR------------IMTQCWQHQPEDRPNFAIILERI-EYCTQD 320
Query: 698 PD 699
PD
Sbjct: 321 PD 322
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 115/302 (38%), Gaps = 59/302 (19%)
Query: 430 NIIGSFSDGTVGTVYKGTLS------SGVEIAV-TSTSVKSRADWSKNLESQFRKKIDTL 482
+I G G VY+G +S S +++AV T V S D E F + +
Sbjct: 50 TLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD-----ELDFLMEALII 104
Query: 483 SKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAE--------HLDWAMR 534
SK NH+N V IG + P R ++ E G L L LD
Sbjct: 105 SKFNHQNIVRCIGVSLQSLP--RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 162
Query: 535 LR-IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLT---EDYAAKISDFSFWNNTTAA--- 587
R IA G Y LE H HR++ + + LT AKI DF + A
Sbjct: 163 ARDIACGCQY-LEENH-----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY 216
Query: 588 KTGSAAM--------ELLETSAVDLESNVYSFGTILFEMIT-GRISY-SIENGSLENWAS 637
+ G AM E +++ +SFG +L+E+ + G + Y S N + + +
Sbjct: 217 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVT 276
Query: 638 EYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAME 697
+ + P K+ P + ++ C P+ RP+ I ++ E +
Sbjct: 277 SGGRMDPP-KNCPGPVYR------------IMTQCWQHQPEDRPNFAIILERI-EYCTQD 322
Query: 698 PD 699
PD
Sbjct: 323 PD 324
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 61/291 (20%), Positives = 121/291 (41%), Gaps = 38/291 (13%)
Query: 432 IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFV 491
IGS + G V + L G+ +AV S R ++ + +++ L VNHKN +
Sbjct: 32 IGSGAQGIVCAAFDTVL--GINVAVKKLS---RPFQNQTHAKRAYRELVLLKCVNHKNII 86
Query: 492 NLIGYCEED---EPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHM 548
+L+ E F + + + +L + +H++ LD + M ++H+
Sbjct: 87 SLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHME----LDHERMSYLLYQMLCGIKHL 142
Query: 549 HQLTPPIAHRNLQSSSIYLTEDYAAKISDF--------SFWNNTTAAKTGSAAMELLETS 600
H + I HR+L+ S+I + D KI DF +F A E++
Sbjct: 143 H--SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVVTRYYRAPEVILGM 200
Query: 601 AVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDI---VDPTLKSF 657
+++S G I+ E++ G + + ++ W + P + + PT++++
Sbjct: 201 GYAANVDIWSVGCIMGELVKGCVIFQ-GTDHIDQWNKVIEQLGTPSAEFMAALQPTVRNY 259
Query: 658 QEN-------VLEELLVVIKNCVHPDPKQRPSMRGIAAK--LKEITAMEPD 699
EN EEL + + P +R ++ A+ L ++ ++PD
Sbjct: 260 VENRPKYPGIKFEELF---PDWIFPSESERDKIKTSQARDLLSKMLVIDPD 307
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 115/302 (38%), Gaps = 59/302 (19%)
Query: 430 NIIGSFSDGTVGTVYKGTLS------SGVEIAV-TSTSVKSRADWSKNLESQFRKKIDTL 482
+I G G VY+G +S S +++AV T V S D E F + +
Sbjct: 40 TLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD-----ELDFLMEALII 94
Query: 483 SKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAE--------HLDWAMR 534
SK NH+N V IG + P R ++ E G L L LD
Sbjct: 95 SKFNHQNIVRCIGVSLQSLP--RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 152
Query: 535 LR-IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLT---EDYAAKISDFSFWNNTTAA--- 587
R IA G Y LE H HR++ + + LT AKI DF + A
Sbjct: 153 ARDIACGCQY-LEENH-----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY 206
Query: 588 KTGSAAM--------ELLETSAVDLESNVYSFGTILFEMIT-GRISY-SIENGSLENWAS 637
+ G AM E +++ +SFG +L+E+ + G + Y S N + + +
Sbjct: 207 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVT 266
Query: 638 EYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAME 697
+ + P K+ P + ++ C P+ RP+ I ++ E +
Sbjct: 267 SGGRMDPP-KNCPGPVYR------------IMTQCWQHQPEDRPNFAIILERI-EYCTQD 312
Query: 698 PD 699
PD
Sbjct: 313 PD 314
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 115/302 (38%), Gaps = 59/302 (19%)
Query: 430 NIIGSFSDGTVGTVYKGTLS------SGVEIAV-TSTSVKSRADWSKNLESQFRKKIDTL 482
+I G G VY+G +S S +++AV T V S D E F + +
Sbjct: 51 TLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD-----ELDFLMEALII 105
Query: 483 SKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAE--------HLDWAMR 534
SK NH+N V IG + P R ++ E G L L LD
Sbjct: 106 SKFNHQNIVRCIGVSLQSLP--RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 163
Query: 535 LR-IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLT---EDYAAKISDFSFWNNTTAA--- 587
R IA G Y LE H HR++ + + LT AKI DF + A
Sbjct: 164 ARDIACGCQY-LEENH-----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYY 217
Query: 588 KTGSAAM--------ELLETSAVDLESNVYSFGTILFEMIT-GRISY-SIENGSLENWAS 637
+ G AM E +++ +SFG +L+E+ + G + Y S N + + +
Sbjct: 218 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVT 277
Query: 638 EYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAME 697
+ + P K+ P + ++ C P+ RP+ I ++ E +
Sbjct: 278 SGGRMDPP-KNCPGPVYR------------IMTQCWQHQPEDRPNFAIILERI-EYCTQD 323
Query: 698 PD 699
PD
Sbjct: 324 PD 325
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 60/285 (21%), Positives = 118/285 (41%), Gaps = 53/285 (18%)
Query: 438 GTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYC 497
G G V+K L + +AV ++ + W Q ++I + + H+N + I
Sbjct: 26 GRFGCVWKAQLMNDF-VAVKIFPLQDKQSW------QSEREIFSTPGMKHENLLQFIAAE 78
Query: 498 EEDE--PFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTP-- 553
+ ++ + GSL ++L + + W +A M+ L ++H+ P
Sbjct: 79 KRGSNLEVELWLITAFHDKGSLTDYL---KGNIITWNELCHVAETMSRGLSYLHEDVPWC 135
Query: 554 -------PIAHRNLQSSSIYLTEDYAAKISDFSFW--------NNTTAAKTGS---AAME 595
IAHR+ +S ++ L D A ++DF T + G+ A E
Sbjct: 136 RGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPE 195
Query: 596 LLETSA-----VDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLK--GEQP--- 645
+LE + L ++Y+ G +L+E+++ +G ++ + + + G+ P
Sbjct: 196 VLEGAINFQRDAFLRIDMYAMGLVLWELVS---RCKAADGPVDEYMLPFEEEIGQHPSLE 252
Query: 646 -LKDIV-----DPTLKS--FQENVLEELLVVIKNCVHPDPKQRPS 682
L+++V PT+K + L +L V I+ C D + R S
Sbjct: 253 ELQEVVVHKKMRPTIKDHWLKHPGLAQLCVTIEECWDHDAEARLS 297
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 87/211 (41%), Gaps = 25/211 (11%)
Query: 426 EDFSNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSK 484
E +N I +G+ G V T +G ++AV ++ + + E F + + +
Sbjct: 45 EYLANFI-KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQ----QRRELLFNEVV-IMRD 98
Query: 485 VNHKNFVNLIG-YCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAY 543
+H N V++ Y DE + M E + H + E + + + +
Sbjct: 99 YHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAT------VCLSVLR 152
Query: 544 CLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT------AAKTGSA---AM 594
L ++H + HR+++S SI LT D K+SDF F + G+ A
Sbjct: 153 ALSYLHNQG--VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAP 210
Query: 595 ELLETSAVDLESNVYSFGTILFEMITGRISY 625
E++ E +++S G ++ EMI G Y
Sbjct: 211 EVISRLPYGTEVDIWSLGIMVIEMIDGEPPY 241
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 112/279 (40%), Gaps = 69/279 (24%)
Query: 438 GTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYC 497
G G V+K L + +AV ++ + W E + +L + H+N + IG
Sbjct: 35 GRFGCVWKAQLLNEY-VAVKIFPIQDKQSWQNEYE------VYSLPGMKHENILQFIGAE 87
Query: 498 EEDEPFT--RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQ----- 550
+ ++ + GSL + L +A + W IA MA L ++H+
Sbjct: 88 KRGTSVDVDLWLITAFHEKGSLSDFL---KANVVSWNELCHIAETMARGLAYLHEDIPGL 144
Query: 551 ---LTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGS-----------AAMEL 596
P I+HR+++S ++ L + A I+DF A K+ A E+
Sbjct: 145 KDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEV 204
Query: 597 LETSAVD------LESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIV 650
LE A++ L ++Y+ G +L+E+ AS + P V
Sbjct: 205 LE-GAINFQRDAFLRIDMYAMGLVLWEL-----------------ASRCTAADGP----V 242
Query: 651 DPTLKSFQENV-----LEELLVVIKNCVHPDPKQRPSMR 684
D + F+E + LE++ V+ VH K+RP +R
Sbjct: 243 DEYMLPFEEEIGQHPSLEDMQEVV---VH--KKKRPVLR 276
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 101/243 (41%), Gaps = 26/243 (10%)
Query: 432 IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFV 491
IGS + G V Y L V I S +++ + + +R+ + + VNHKN +
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQT----HAKRAYRELV-LMKCVNHKNII 86
Query: 492 NLIGYCEED---EPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHM 548
+L+ E F + + + +L + + ++ LD + M ++H+
Sbjct: 87 SLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME----LDHERMSYLLYQMLXGIKHL 142
Query: 549 HQLTPPIAHRNLQSSSIYLTEDYAAKISDF--------SFWNNTTAAKTGSAAMELLETS 600
H + I HR+L+ S+I + D KI DF SF A E++
Sbjct: 143 H--SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM 200
Query: 601 AVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDI---VDPTLKSF 657
+++S G I+ EM+ +I + + ++ W + P + + PT++++
Sbjct: 201 GYKENVDIWSVGCIMGEMVRHKILFPGRD-YIDQWNKVIEQLGTPCPEFMKKLQPTVRNY 259
Query: 658 QEN 660
EN
Sbjct: 260 VEN 262
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 115/302 (38%), Gaps = 59/302 (19%)
Query: 430 NIIGSFSDGTVGTVYKGTLS------SGVEIAV-TSTSVKSRADWSKNLESQFRKKIDTL 482
+I G G VY+G +S S +++AV T V S D E F + +
Sbjct: 34 TLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD-----ELDFLMEALII 88
Query: 483 SKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAE--------HLDWAMR 534
SK NH+N V IG + P R ++ E G L L LD
Sbjct: 89 SKFNHQNIVRCIGVSLQSLP--RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 146
Query: 535 LR-IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLT---EDYAAKISDFSFWNNTTAA--- 587
R IA G Y LE H HR++ + + LT AKI DF + A
Sbjct: 147 ARDIACGCQY-LEENH-----FIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYY 200
Query: 588 KTGSAAM--------ELLETSAVDLESNVYSFGTILFEMIT-GRISY-SIENGSLENWAS 637
+ G AM E +++ +SFG +L+E+ + G + Y S N + + +
Sbjct: 201 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVT 260
Query: 638 EYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAME 697
+ + P K+ P + ++ C P+ RP+ I ++ E +
Sbjct: 261 SGGRMDPP-KNCPGPVYR------------IMTQCWQHQPEDRPNFAIILERI-EYCTQD 306
Query: 698 PD 699
PD
Sbjct: 307 PD 308
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 101/243 (41%), Gaps = 26/243 (10%)
Query: 432 IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFV 491
IGS + G V Y L V I S +++ + + +R+ + + VNHKN +
Sbjct: 26 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQT----HAKRAYRELV-LMKCVNHKNII 80
Query: 492 NLIGYCEED---EPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHM 548
+L+ E F + + + +L + + ++ LD + M ++H+
Sbjct: 81 SLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME----LDHERMSYLLYQMLCGIKHL 136
Query: 549 HQLTPPIAHRNLQSSSIYLTEDYAAKISDF--------SFWNNTTAAKTGSAAMELLETS 600
H + I HR+L+ S+I + D KI DF SF A E++
Sbjct: 137 H--SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM 194
Query: 601 AVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDI---VDPTLKSF 657
+++S G I+ EM+ +I + + ++ W + P + + PT++++
Sbjct: 195 GYKENVDIWSVGCIMGEMVRHKILFPGRD-YIDQWNKVIEQLGTPCPEFMKKLQPTVRNY 253
Query: 658 QEN 660
EN
Sbjct: 254 VEN 256
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 101/243 (41%), Gaps = 26/243 (10%)
Query: 432 IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFV 491
IGS + G V Y L V I S +++ + + +R+ + + VNHKN +
Sbjct: 25 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQT----HAKRAYRELV-LMKCVNHKNII 79
Query: 492 NLIGYCEED---EPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHM 548
+L+ E F + + + +L + + ++ LD + M ++H+
Sbjct: 80 SLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME----LDHERMSYLLYQMLCGIKHL 135
Query: 549 HQLTPPIAHRNLQSSSIYLTEDYAAKISDF--------SFWNNTTAAKTGSAAMELLETS 600
H + I HR+L+ S+I + D KI DF SF A E++
Sbjct: 136 H--SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM 193
Query: 601 AVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDI---VDPTLKSF 657
+++S G I+ EM+ +I + + ++ W + P + + PT++++
Sbjct: 194 GYKENVDIWSVGCIMGEMVRHKILFPGRD-YIDQWNKVIEQLGTPCPEFMKKLQPTVRNY 252
Query: 658 QEN 660
EN
Sbjct: 253 VEN 255
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 115/302 (38%), Gaps = 59/302 (19%)
Query: 430 NIIGSFSDGTVGTVYKGTLS------SGVEIAV-TSTSVKSRADWSKNLESQFRKKIDTL 482
+I G G VY+G +S S +++AV T V S D E F + +
Sbjct: 34 TLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD-----ELDFLMEALII 88
Query: 483 SKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAE--------HLDWAMR 534
SK NH+N V IG + P R ++ E G L L LD
Sbjct: 89 SKFNHQNIVRCIGVSLQSLP--RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 146
Query: 535 LR-IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLT---EDYAAKISDFSFWNNTTAA--- 587
R IA G Y LE H HR++ + + LT AKI DF + A
Sbjct: 147 ARDIACGCQY-LEENH-----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY 200
Query: 588 KTGSAAM--------ELLETSAVDLESNVYSFGTILFEMIT-GRISY-SIENGSLENWAS 637
+ G AM E +++ +SFG +L+E+ + G + Y S N + + +
Sbjct: 201 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVT 260
Query: 638 EYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAME 697
+ + P K+ P + ++ C P+ RP+ I ++ E +
Sbjct: 261 SGGRMDPP-KNCPGPVYR------------IMTQCWQHQPEDRPNFAIILERI-EYCTQD 306
Query: 698 PD 699
PD
Sbjct: 307 PD 308
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 101/243 (41%), Gaps = 26/243 (10%)
Query: 432 IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFV 491
IGS + G V Y L V I S +++ + + +R+ + + VNHKN +
Sbjct: 26 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQT----HAKRAYRELV-LMKCVNHKNII 80
Query: 492 NLIGYCEED---EPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHM 548
+L+ E F + + + +L + + ++ LD + M ++H+
Sbjct: 81 SLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME----LDHERMSYLLYQMLCGIKHL 136
Query: 549 HQLTPPIAHRNLQSSSIYLTEDYAAKISDF--------SFWNNTTAAKTGSAAMELLETS 600
H + I HR+L+ S+I + D KI DF SF A E++
Sbjct: 137 H--SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM 194
Query: 601 AVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDI---VDPTLKSF 657
+++S G I+ EM+ +I + + ++ W + P + + PT++++
Sbjct: 195 GYKENVDIWSVGCIMGEMVRHKILFPGRD-YIDQWNKVIEQLGTPCPEFMKKLQPTVRNY 253
Query: 658 QEN 660
EN
Sbjct: 254 VEN 256
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 115/302 (38%), Gaps = 59/302 (19%)
Query: 430 NIIGSFSDGTVGTVYKGTLS------SGVEIAV-TSTSVKSRADWSKNLESQFRKKIDTL 482
+I G G VY+G +S S +++AV T V S D E F + +
Sbjct: 48 TLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD-----ELDFLMEALII 102
Query: 483 SKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAE--------HLDWAMR 534
SK NH+N V IG + P R ++ E G L L LD
Sbjct: 103 SKFNHQNIVRCIGVSLQSLP--RFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 160
Query: 535 LR-IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLT---EDYAAKISDFSFWNNTTAA--- 587
R IA G Y LE H HR++ + + LT AKI DF + A
Sbjct: 161 ARDIACGCQY-LEENH-----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY 214
Query: 588 KTGSAAM--------ELLETSAVDLESNVYSFGTILFEMIT-GRISY-SIENGSLENWAS 637
+ G AM E +++ +SFG +L+E+ + G + Y S N + + +
Sbjct: 215 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVT 274
Query: 638 EYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAME 697
+ + P K+ P + ++ C P+ RP+ I ++ E +
Sbjct: 275 SGGRMDPP-KNCPGPVYR------------IMTQCWQHQPEDRPNFAIILERI-EYCTQD 320
Query: 698 PD 699
PD
Sbjct: 321 PD 322
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 115/302 (38%), Gaps = 59/302 (19%)
Query: 430 NIIGSFSDGTVGTVYKGTLS------SGVEIAV-TSTSVKSRADWSKNLESQFRKKIDTL 482
+I G G VY+G +S S +++AV T V S D E F + +
Sbjct: 74 TLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD-----ELDFLMEALII 128
Query: 483 SKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAE--------HLDWAMR 534
SK NH+N V IG + P R ++ E G L L LD
Sbjct: 129 SKFNHQNIVRCIGVSLQSLP--RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 186
Query: 535 LR-IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLT---EDYAAKISDFSFWNNTTAA--- 587
R IA G Y LE H HR++ + + LT AKI DF + A
Sbjct: 187 ARDIACGCQY-LEENH-----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYY 240
Query: 588 KTGSAAM--------ELLETSAVDLESNVYSFGTILFEMIT-GRISY-SIENGSLENWAS 637
+ G AM E +++ +SFG +L+E+ + G + Y S N + + +
Sbjct: 241 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVT 300
Query: 638 EYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAME 697
+ + P K+ P + ++ C P+ RP+ I ++ E +
Sbjct: 301 SGGRMDPP-KNCPGPVYR------------IMTQCWQHQPEDRPNFAIILERI-EYCTQD 346
Query: 698 PD 699
PD
Sbjct: 347 PD 348
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 61/297 (20%), Positives = 113/297 (38%), Gaps = 52/297 (17%)
Query: 427 DFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV- 485
D N+ G G V + + G++ T +V + S+ R + L +
Sbjct: 28 DRLNLGKPLGRGAFGQVIEAD-AFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILI 86
Query: 486 ---NHKNFVNLIGYC-EEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDW---------- 531
+H N VNL+G C + P M++ E+ G+L +L + E + +
Sbjct: 87 HIGHHLNVVNLLGACTKPGGPL--MVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDF 144
Query: 532 -------AMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT 584
++A GM + HR+L + +I L+E KI DF +
Sbjct: 145 LTLEHLICYSFQVAKGMEFLASRK------CIHRDLAARNILLSEKNVVKICDFGLARDI 198
Query: 585 T----AAKTGSA-------AMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLE 633
+ G A A E + ++S+V+SFG +L+E+ + + S G
Sbjct: 199 XKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS--LGASPYPGVKI 256
Query: 634 NWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKL 690
+ E+ + + + T + E+ + +C H +P QRP+ + L
Sbjct: 257 D--------EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 106/261 (40%), Gaps = 46/261 (17%)
Query: 459 TSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLF 518
+VK + + F+++I L ++ V G + +V EY P+G L
Sbjct: 42 VAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLR 101
Query: 519 EHLHIQEAEHLDWAMRL-----RIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAA 573
+ L A LD A RL +I GM Y HR+L + +I + +
Sbjct: 102 DFLQRHRAR-LD-ASRLLLYSSQICKGMEYLGSRR------CVHRDLAARNILVESEAHV 153
Query: 574 KISDFSFW-------NNTTAAKTGSA-----AMELLETSAVDLESNVYSFGTILFEMITG 621
KI+DF + + G + A E L + +S+V+SFG +L+E+ T
Sbjct: 154 KIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT- 212
Query: 622 RISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLE------------ELLVVI 669
Y ++ S ++E+L+ +D+ P L E + E E+ ++
Sbjct: 213 ---YCDKSCSP---SAEFLRMMGSERDV--PALSRLLELLEEGQRLPAPPACPAEVHELM 264
Query: 670 KNCVHPDPKQRPSMRGIAAKL 690
K C P P+ RPS + +L
Sbjct: 265 KLCWAPSPQDRPSFSALGPQL 285
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 101/243 (41%), Gaps = 26/243 (10%)
Query: 432 IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFV 491
IGS + G V Y L V I S +++ + + +R+ + + VNHKN +
Sbjct: 31 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQT----HAKRAYRELV-LMKCVNHKNII 85
Query: 492 NLIGYCEED---EPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHM 548
+L+ E F + + + +L + + ++ LD + M ++H+
Sbjct: 86 SLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME----LDHERMSYLLYQMLCGIKHL 141
Query: 549 HQLTPPIAHRNLQSSSIYLTEDYAAKISDF--------SFWNNTTAAKTGSAAMELLETS 600
H + I HR+L+ S+I + D KI DF SF A E++
Sbjct: 142 H--SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM 199
Query: 601 AVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDI---VDPTLKSF 657
+++S G I+ EM+ +I + + ++ W + P + + PT++++
Sbjct: 200 GYKENVDIWSVGCIMGEMVRHKILFPGRD-YIDQWNKVIEQLGTPCPEFMKKLQPTVRNY 258
Query: 658 QEN 660
EN
Sbjct: 259 VEN 261
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 101/243 (41%), Gaps = 26/243 (10%)
Query: 432 IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFV 491
IGS + G V Y L V I S +++ + + +R+ + + VNHKN +
Sbjct: 33 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQT----HAKRAYRELV-LMKCVNHKNII 87
Query: 492 NLIGYCEED---EPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHM 548
+L+ E F + + + +L + + ++ LD + M ++H+
Sbjct: 88 SLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME----LDHERMSYLLYQMLCGIKHL 143
Query: 549 HQLTPPIAHRNLQSSSIYLTEDYAAKISDF--------SFWNNTTAAKTGSAAMELLETS 600
H + I HR+L+ S+I + D KI DF SF A E++
Sbjct: 144 H--SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM 201
Query: 601 AVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDI---VDPTLKSF 657
+++S G I+ EM+ +I + + ++ W + P + + PT++++
Sbjct: 202 GYKENVDIWSVGCIMGEMVRHKILFPGRD-YIDQWNKVIEQLGTPCPEFMKKLQPTVRNY 260
Query: 658 QEN 660
EN
Sbjct: 261 VEN 263
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 91/204 (44%), Gaps = 26/204 (12%)
Query: 432 IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFV 491
+GS + G+V + Y + SG++IAV S R S + +++ L + H+N +
Sbjct: 59 VGSGAYGSVCSSYD--VKSGLKIAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVI 113
Query: 492 NLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLR------IAMGMAYCL 545
L+ + FT E + L HL + ++ +L + + L
Sbjct: 114 GLL------DVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 167
Query: 546 EHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSAAME-------LLE 598
+++H + I HR+L+ S++ + ED KI DF +T TG A +L
Sbjct: 168 KYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 225
Query: 599 TSAVDLESNVYSFGTILFEMITGR 622
++ +++S G I+ E++TGR
Sbjct: 226 WMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 115/302 (38%), Gaps = 59/302 (19%)
Query: 430 NIIGSFSDGTVGTVYKGTLS------SGVEIAV-TSTSVKSRADWSKNLESQFRKKIDTL 482
+I G G VY+G +S S +++AV T V S D E F + +
Sbjct: 60 TLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD-----ELDFLMEALII 114
Query: 483 SKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAE--------HLDWAMR 534
SK NH+N V IG + P R ++ E G L L LD
Sbjct: 115 SKFNHQNIVRCIGVSLQSLP--RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 172
Query: 535 LR-IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLT---EDYAAKISDFSFWNNTTAA--- 587
R IA G Y LE H HR++ + + LT AKI DF + A
Sbjct: 173 ARDIACGCQY-LEENH-----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY 226
Query: 588 KTGSAAM--------ELLETSAVDLESNVYSFGTILFEMIT-GRISY-SIENGSLENWAS 637
+ G AM E +++ +SFG +L+E+ + G + Y S N + + +
Sbjct: 227 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVT 286
Query: 638 EYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAME 697
+ + P K+ P + ++ C P+ RP+ I ++ E +
Sbjct: 287 SGGRMDPP-KNCPGPVYR------------IMTQCWQHQPEDRPNFAIILERI-EYCTQD 332
Query: 698 PD 699
PD
Sbjct: 333 PD 334
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 101/243 (41%), Gaps = 26/243 (10%)
Query: 432 IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFV 491
IGS + G V Y L V I S +++ + + +R+ + + VNHKN +
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQT----HAKRAYRELV-LMKCVNHKNII 86
Query: 492 NLIGYCEED---EPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHM 548
+L+ E F + + + +L + + ++ LD + M ++H+
Sbjct: 87 SLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME----LDHERMSYLLYQMLCGIKHL 142
Query: 549 HQLTPPIAHRNLQSSSIYLTEDYAAKISDF--------SFWNNTTAAKTGSAAMELLETS 600
H + I HR+L+ S+I + D KI DF SF A E++
Sbjct: 143 H--SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM 200
Query: 601 AVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDI---VDPTLKSF 657
+++S G I+ EM+ +I + + ++ W + P + + PT++++
Sbjct: 201 GYKENVDIWSVGCIMGEMVRHKILFPGRD-YIDQWNKVIEQLGTPCPEFMKKLQPTVRNY 259
Query: 658 QEN 660
EN
Sbjct: 260 VEN 262
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 72/154 (46%), Gaps = 12/154 (7%)
Query: 482 LSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGM 541
LS V H + + G ++ + M+ +Y G LF L ++++ + A +
Sbjct: 60 LSIVTHPFIIRMWGTFQDAQQI--FMIMDYIEGGELFSLL--RKSQRFPNPVAKFYAAEV 115
Query: 542 AYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWN---NTTAAKTGSA---AME 595
LE++H + I +R+L+ +I L ++ KI+DF F + T G+ A E
Sbjct: 116 CLALEYLH--SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYXLCGTPDYIAPE 173
Query: 596 LLETSAVDLESNVYSFGTILFEMITGRISYSIEN 629
++ T + + +SFG +++EM+ G + N
Sbjct: 174 VVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSN 207
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 101/243 (41%), Gaps = 26/243 (10%)
Query: 432 IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFV 491
IGS + G V Y L V I S +++ + + +R+ + + VNHKN +
Sbjct: 33 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQT----HAKRAYRELV-LMKCVNHKNII 87
Query: 492 NLIGYCEED---EPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHM 548
+L+ E F + + + +L + + ++ LD + M ++H+
Sbjct: 88 SLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME----LDHERMSYLLYQMLCGIKHL 143
Query: 549 HQLTPPIAHRNLQSSSIYLTEDYAAKISDF--------SFWNNTTAAKTGSAAMELLETS 600
H + I HR+L+ S+I + D KI DF SF A E++
Sbjct: 144 H--SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM 201
Query: 601 AVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDI---VDPTLKSF 657
+++S G I+ EM+ +I + + ++ W + P + + PT++++
Sbjct: 202 GYKENVDIWSVGCIMGEMVRHKILFPGRD-YIDQWNKVIEQLGTPCPEFMKKLQPTVRNY 260
Query: 658 QEN 660
EN
Sbjct: 261 VEN 263
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 101/243 (41%), Gaps = 26/243 (10%)
Query: 432 IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFV 491
IGS + G V Y L V I S +++ + + +R+ + + VNHKN +
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQT----HAKRAYRELV-LMKCVNHKNII 86
Query: 492 NLIGYCEED---EPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHM 548
+L+ E F + + + +L + + ++ LD + M ++H+
Sbjct: 87 SLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME----LDHERMSYLLYQMLCGIKHL 142
Query: 549 HQLTPPIAHRNLQSSSIYLTEDYAAKISDF--------SFWNNTTAAKTGSAAMELLETS 600
H + I HR+L+ S+I + D KI DF SF A E++
Sbjct: 143 H--SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM 200
Query: 601 AVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDI---VDPTLKSF 657
+++S G I+ EM+ +I + + ++ W + P + + PT++++
Sbjct: 201 GYKENVDIWSVGCIMGEMVRHKILFPGRD-YIDQWNKVIEQLGTPCPEFMKKLQPTVRNY 259
Query: 658 QEN 660
EN
Sbjct: 260 VEN 262
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 84/220 (38%), Gaps = 44/220 (20%)
Query: 426 EDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADW-SKNLESQFRKKIDTLSK 484
E+F + +GT G VYK E+ K R D ++ + S ++I L +
Sbjct: 2 ENFQKV-EKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 57
Query: 485 VNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAM----- 539
+NH N V L+ + + FEH+H +D + I +
Sbjct: 58 LNHPNIVKLLDVIHTENKLYLV-----------FEHVHQDLKTFMDASALTGIPLPLIKS 106
Query: 540 -------GMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF----------WN 582
G+A+C H H+ + HR+L+ ++ + + A K++DF +
Sbjct: 107 YLFQLLQGLAFC--HSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT 160
Query: 583 NTTAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGR 622
+ A LL +++S G I EM+T R
Sbjct: 161 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 69/162 (42%), Gaps = 16/162 (9%)
Query: 477 KKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLR 536
K+I +L++ NH L +C P V E+ G L HIQ++ D A
Sbjct: 74 KRILSLAR-NHPFLTQL--FCCFQTPDRLFFVMEFVNGGDLM--FHIQKSRRFDEARARF 128
Query: 537 IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN------TTAAKTG 590
A + L +H I +R+L+ ++ L + K++DF TTA G
Sbjct: 129 YAAEIISALMFLHDKG--IIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCG 186
Query: 591 SA---AMELLETSAVDLESNVYSFGTILFEMITGRISYSIEN 629
+ A E+L+ + ++ G +L+EM+ G + EN
Sbjct: 187 TPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAEN 228
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 106/261 (40%), Gaps = 46/261 (17%)
Query: 459 TSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLF 518
+VK + + F+++I L ++ V G + +V EY P+G L
Sbjct: 55 VAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLR 114
Query: 519 EHLHIQEAEHLDWAMRL-----RIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAA 573
+ L A LD A RL +I GM Y HR+L + +I + +
Sbjct: 115 DFLQRHRAR-LD-ASRLLLYSSQICKGMEYLGSRR------CVHRDLAARNILVESEAHV 166
Query: 574 KISDFSFW-------NNTTAAKTGSA-----AMELLETSAVDLESNVYSFGTILFEMITG 621
KI+DF + + G + A E L + +S+V+SFG +L+E+ T
Sbjct: 167 KIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT- 225
Query: 622 RISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLE------------ELLVVI 669
Y ++ S ++E+L+ +D+ P L E + E E+ ++
Sbjct: 226 ---YCDKSCSP---SAEFLRMMGCERDV--PALSRLLELLEEGQRLPAPPACPAEVHELM 277
Query: 670 KNCVHPDPKQRPSMRGIAAKL 690
K C P P+ RPS + +L
Sbjct: 278 KLCWAPSPQDRPSFSALGPQL 298
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 101/243 (41%), Gaps = 26/243 (10%)
Query: 432 IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFV 491
IGS + G V Y L V I S +++ + + +R+ + + VNHKN +
Sbjct: 70 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQT----HAKRAYRELV-LMKCVNHKNII 124
Query: 492 NLIGYCEED---EPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHM 548
+L+ E F + + + +L + + ++ LD + M ++H+
Sbjct: 125 SLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME----LDHERMSYLLYQMLCGIKHL 180
Query: 549 HQLTPPIAHRNLQSSSIYLTEDYAAKISDF--------SFWNNTTAAKTGSAAMELLETS 600
H + I HR+L+ S+I + D KI DF SF A E++
Sbjct: 181 H--SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM 238
Query: 601 AVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDI---VDPTLKSF 657
+++S G I+ EM+ +I + + ++ W + P + + PT++++
Sbjct: 239 GYKENVDIWSVGCIMGEMVRHKILFPGRD-YIDQWNKVIEQLGTPCPEFMKKLQPTVRNY 297
Query: 658 QEN 660
EN
Sbjct: 298 VEN 300
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 101/243 (41%), Gaps = 26/243 (10%)
Query: 432 IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFV 491
IGS + G V Y L V I S +++ + + +R+ + + VNHKN +
Sbjct: 70 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQT----HAKRAYRELV-LMKCVNHKNII 124
Query: 492 NLIGYCEED---EPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHM 548
+L+ E F + + + +L + + ++ LD + M ++H+
Sbjct: 125 SLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME----LDHERMSYLLYQMLCGIKHL 180
Query: 549 HQLTPPIAHRNLQSSSIYLTEDYAAKISDF--------SFWNNTTAAKTGSAAMELLETS 600
H + I HR+L+ S+I + D KI DF SF A E++
Sbjct: 181 H--SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM 238
Query: 601 AVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDI---VDPTLKSF 657
+++S G I+ EM+ +I + + ++ W + P + + PT++++
Sbjct: 239 GYKENVDIWSVGCIMGEMVRHKILFPGRD-YIDQWNKVIEQLGTPCPEFMKKLQPTVRNY 297
Query: 658 QEN 660
EN
Sbjct: 298 VEN 300
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/138 (21%), Positives = 55/138 (39%), Gaps = 22/138 (15%)
Query: 555 IAHRNLQSSSIYLTEDYAAKISDFSFWNNTT---------AAKTGSAAMELLETSAVDLE 605
+ HR+L+ +++L +D KI DF A E+L E
Sbjct: 147 VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFE 206
Query: 606 SNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEEL 665
+++S G IL+ ++ G+ + E L+ K E + ++P +
Sbjct: 207 VDIWSLGCILYTLLVGKPPF--ETSCLKETYIRIKKNEYSVPRHINPVASA--------- 255
Query: 666 LVVIKNCVHPDPKQRPSM 683
+I+ +H DP RPS+
Sbjct: 256 --LIRRMLHADPTLRPSV 271
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 74/155 (47%), Gaps = 14/155 (9%)
Query: 478 KIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLH--IQEAEHLDWAMRL 535
+++ L ++ H N V + T +V EY G L + +E ++LD L
Sbjct: 55 EVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVL 114
Query: 536 RIAMGMAYCLEHMHQLTP---PIAHRNLQSSSIYLTEDYAAKISDFSFW----NNTTAAK 588
R+ + L+ H+ + + HR+L+ ++++L K+ DF ++T+ AK
Sbjct: 115 RVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAK 174
Query: 589 T--GS---AAMELLETSAVDLESNVYSFGTILFEM 618
T G+ + E + + + +S+++S G +L+E+
Sbjct: 175 TFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 86/220 (39%), Gaps = 44/220 (20%)
Query: 426 EDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADW-SKNLESQFRKKIDTLSK 484
E+F + +GT G VYK E+ K R D ++ + S ++I L +
Sbjct: 10 ENFQKV-EKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 65
Query: 485 VNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAM----- 539
+NH N V L+ + +VFE+ LH + +D + I +
Sbjct: 66 LNHPNIVKLLDVIHTENKL--YLVFEF---------LHQDLKKFMDASALTGIPLPLIKS 114
Query: 540 -------GMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF----------WN 582
G+A+C H H+ + HR+L+ ++ + + A K++DF +
Sbjct: 115 YLFQLLQGLAFC--HSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT 168
Query: 583 NTTAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGR 622
+ A LL +++S G I EM+T R
Sbjct: 169 HEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 106/261 (40%), Gaps = 46/261 (17%)
Query: 459 TSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLF 518
+VK + + F+++I L ++ V G + +V EY P+G L
Sbjct: 43 VAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLR 102
Query: 519 EHLHIQEAEHLDWAMRL-----RIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAA 573
+ L A LD A RL +I GM Y HR+L + +I + +
Sbjct: 103 DFLQRHRAR-LD-ASRLLLYSSQICKGMEYLGSRR------CVHRDLAARNILVESEAHV 154
Query: 574 KISDFSFW-------NNTTAAKTGSA-----AMELLETSAVDLESNVYSFGTILFEMITG 621
KI+DF + + G + A E L + +S+V+SFG +L+E+ T
Sbjct: 155 KIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT- 213
Query: 622 RISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLE------------ELLVVI 669
Y ++ S ++E+L+ +D+ P L E + E E+ ++
Sbjct: 214 ---YCDKSCSP---SAEFLRMMGCERDV--PALCRLLELLEEGQRLPAPPACPAEVHELM 265
Query: 670 KNCVHPDPKQRPSMRGIAAKL 690
K C P P+ RPS + +L
Sbjct: 266 KLCWAPSPQDRPSFSALGPQL 286
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 55/121 (45%), Gaps = 16/121 (13%)
Query: 555 IAHRNLQSSSIYLTEDYAAKISDFSFWNNTT------AAKTGS---AAMELLETSAVDLE 605
+ HR+++S SI LT D K+SDF F + G+ A E++ S E
Sbjct: 162 VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISRSLYATE 221
Query: 606 SNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLK----DIVDPTLKSFQENV 661
+++S G ++ EM+ G Y ++ A + L+ P K V P L+ F E +
Sbjct: 222 VDIWSLGIMVIEMVDGEPPYFSDSPV---QAMKRLRDSPPPKLKNSHKVSPVLRDFLERM 278
Query: 662 L 662
L
Sbjct: 279 L 279
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 86/220 (39%), Gaps = 44/220 (20%)
Query: 426 EDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADW-SKNLESQFRKKIDTLSK 484
E+F + +GT G VYK E+ K R D ++ + S ++I L +
Sbjct: 10 ENFQKV-EKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 65
Query: 485 VNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAM----- 539
+NH N V L+ + +VFE+ LH + +D + I +
Sbjct: 66 LNHPNIVKLLDVIHTENKL--YLVFEF---------LHQDLKKFMDASALTGIPLPLIKS 114
Query: 540 -------GMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF----------WN 582
G+A+C H H+ + HR+L+ ++ + + A K++DF +
Sbjct: 115 YLFQLLQGLAFC--HSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT 168
Query: 583 NTTAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGR 622
+ A LL +++S G I EM+T R
Sbjct: 169 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 87/223 (39%), Gaps = 44/223 (19%)
Query: 423 AACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADW-SKNLESQFRKKIDT 481
+ E+F + +GT G VYK E+ K R D ++ + S ++I
Sbjct: 1 GSMENFQKV-EKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISL 56
Query: 482 LSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAM-- 539
L ++NH N V L+ + +VFE+ LH + +D + I +
Sbjct: 57 LKELNHPNIVKLLDVIHTENKL--YLVFEF---------LHQDLKKFMDASALTGIPLPL 105
Query: 540 ----------GMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF--------- 580
G+A+C H H+ + HR+L+ ++ + + A K++DF
Sbjct: 106 IKSYLFQLLQGLAFC--HSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 159
Query: 581 -WNNTTAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGR 622
+ + A LL +++S G I EM+T R
Sbjct: 160 TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 87/223 (39%), Gaps = 44/223 (19%)
Query: 423 AACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADW-SKNLESQFRKKIDT 481
+ E+F + +GT G VYK E+ K R D ++ + S ++I
Sbjct: 3 GSMENFQKV-EKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISL 58
Query: 482 LSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAM-- 539
L ++NH N V L+ + +VFE+ LH + +D + I +
Sbjct: 59 LKELNHPNIVKLLDVIHTENKL--YLVFEF---------LHQDLKKFMDASALTGIPLPL 107
Query: 540 ----------GMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF--------- 580
G+A+C H H+ + HR+L+ ++ + + A K++DF
Sbjct: 108 IKSYLFQLLQGLAFC--HSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 161
Query: 581 -WNNTTAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGR 622
+ + A LL +++S G I EM+T R
Sbjct: 162 TYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 87/223 (39%), Gaps = 44/223 (19%)
Query: 423 AACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADW-SKNLESQFRKKIDT 481
+ E+F + +GT G VYK E+ K R D ++ + S ++I
Sbjct: 2 GSMENFQKV-EKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISL 57
Query: 482 LSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAM-- 539
L ++NH N V L+ + +VFE+ LH + +D + I +
Sbjct: 58 LKELNHPNIVKLLDVIHTENKL--YLVFEF---------LHQDLKKFMDASALTGIPLPL 106
Query: 540 ----------GMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF--------- 580
G+A+C H H+ + HR+L+ ++ + + A K++DF
Sbjct: 107 IKSYLFQLLQGLAFC--HSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 160
Query: 581 -WNNTTAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGR 622
+ + A LL +++S G I EM+T R
Sbjct: 161 TYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 97/239 (40%), Gaps = 47/239 (19%)
Query: 438 GTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYC 497
G G+V +G + + V + + E R+ + ++++ V LIG C
Sbjct: 21 GNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREA-QIMHQLDNPYIVRLIGVC 79
Query: 498 EEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWA----MRLRIAMGMAYCLEHMHQLTP 553
+ + M+V E + G L + L + + E + + + +++MGM Y E
Sbjct: 80 QAE---ALMLVMEMAGGGPLHKFL-VGKREEIPVSNVAELLHQVSMGMKYLEEK------ 129
Query: 554 PIAHRNLQSSSIYLTEDYAAKISDF----------SFWNNTTAAK--TGSAAMELLETSA 601
HR+L + ++ L + AKISDF S++ +A K A E +
Sbjct: 130 NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRK 189
Query: 602 VDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQEN 660
S+V+S+G ++E +SY G++P K + P + +F E
Sbjct: 190 FSSRSDVWSYGVTMWEA----LSY----------------GQKPYKKMKGPEVMAFIEQ 228
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 86/220 (39%), Gaps = 44/220 (20%)
Query: 426 EDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADW-SKNLESQFRKKIDTLSK 484
E+F + +GT G VYK E+ K R D ++ + S ++I L +
Sbjct: 7 ENFQKV-EKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 62
Query: 485 VNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAM----- 539
+NH N V L+ + +VFE+ LH + +D + I +
Sbjct: 63 LNHPNIVKLLDVIHTENKL--YLVFEF---------LHQDLKKFMDASALTGIPLPLIKS 111
Query: 540 -------GMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF----------WN 582
G+A+C H H+ + HR+L+ ++ + + A K++DF +
Sbjct: 112 YLFQLLQGLAFC--HSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT 165
Query: 583 NTTAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGR 622
+ A LL +++S G I EM+T R
Sbjct: 166 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 87/223 (39%), Gaps = 44/223 (19%)
Query: 423 AACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADW-SKNLESQFRKKIDT 481
+ E+F + +GT G VYK E+ K R D ++ + S ++I
Sbjct: 2 GSMENFQKV-EKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISL 57
Query: 482 LSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAM-- 539
L ++NH N V L+ + +VFE+ LH + +D + I +
Sbjct: 58 LKELNHPNIVKLLDVIHTENKL--YLVFEF---------LHQDLKKFMDASALTGIPLPL 106
Query: 540 ----------GMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF--------- 580
G+A+C H H+ + HR+L+ ++ + + A K++DF
Sbjct: 107 IKSYLFQLLQGLAFC--HSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 160
Query: 581 -WNNTTAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGR 622
+ + A LL +++S G I EM+T R
Sbjct: 161 TYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 58/138 (42%), Gaps = 22/138 (15%)
Query: 555 IAHRNLQSSSIYLTEDYAAKISDFS------FWNNTTAAKTGSA---AMELLETSAVDLE 605
+ HR+L+ +++L +D KI DF F G+ A E+L E
Sbjct: 163 VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLCKKGHSFE 222
Query: 606 SNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEEL 665
+++S G IL+ ++ G+ + E L+ K E + ++P +
Sbjct: 223 VDIWSLGCILYTLLVGKPPF--ETSCLKETYIRIKKNEYSVPRHINPVASA--------- 271
Query: 666 LVVIKNCVHPDPKQRPSM 683
+I+ +H DP RPS+
Sbjct: 272 --LIRRMLHADPTLRPSV 287
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 87/223 (39%), Gaps = 44/223 (19%)
Query: 423 AACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADW-SKNLESQFRKKIDT 481
+ E+F + +GT G VYK E+ K R D ++ + S ++I
Sbjct: 4 GSMENFQKV-EKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISL 59
Query: 482 LSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAM-- 539
L ++NH N V L+ + +VFE+ LH + +D + I +
Sbjct: 60 LKELNHPNIVKLLDVIHTENKL--YLVFEF---------LHQDLKKFMDASALTGIPLPL 108
Query: 540 ----------GMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF--------- 580
G+A+C H H+ + HR+L+ ++ + + A K++DF
Sbjct: 109 IKSYLFQLLQGLAFC--HSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 162
Query: 581 -WNNTTAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGR 622
+ + A LL +++S G I EM+T R
Sbjct: 163 TYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 92/233 (39%), Gaps = 46/233 (19%)
Query: 486 NHKNFVNLIGYC-EEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDW------------- 531
+H N VNL+G C + P M++ E+ G+L +L + E + +
Sbjct: 91 HHLNVVNLLGACTKPGGPL--MVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLE 148
Query: 532 ---AMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT--- 585
++A GM + HR+L + +I L+E KI DF +
Sbjct: 149 HLIXYSFQVAKGMEFLASRK------XIHRDLAARNILLSEKNVVKICDFGLARDIXKDP 202
Query: 586 -AAKTGSA-------AMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWAS 637
+ G A A E + ++S+V+SFG +L+E+ + + S G +
Sbjct: 203 DXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS--LGASPYPGVKID--- 257
Query: 638 EYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKL 690
E+ + + + T + E+ + +C H +P QRP+ + L
Sbjct: 258 -----EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 105/256 (41%), Gaps = 36/256 (14%)
Query: 459 TSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLF 518
+VK + + F+++I L ++ V G +V EY P+G L
Sbjct: 39 VAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLR 98
Query: 519 EHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF 578
+ L A LD + L + + +E++ HR+L + +I + + KI+DF
Sbjct: 99 DFLQRHRAR-LDASRLLLYSSQICKGMEYLGSRR--CVHRDLAARNILVESEAHVKIADF 155
Query: 579 SFW-------NNTTAAKTGSA-----AMELLETSAVDLESNVYSFGTILFEMITGRISYS 626
+ + G + A E L + +S+V+SFG +L+E+ T Y
Sbjct: 156 GLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT----YC 211
Query: 627 IENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLE------------ELLVVIKNCVH 674
++ S ++E+L+ +D+ P L E + E E+ ++K C
Sbjct: 212 DKSCSP---SAEFLRMMGCERDV--PALCRLLELLEEGQRLPAPPACPAEVHELMKLCWA 266
Query: 675 PDPKQRPSMRGIAAKL 690
P P+ RPS + +L
Sbjct: 267 PSPQDRPSFSALGPQL 282
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 87/223 (39%), Gaps = 44/223 (19%)
Query: 423 AACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADW-SKNLESQFRKKIDT 481
+ E+F + +GT G VYK E+ K R D ++ + S ++I
Sbjct: 3 GSMENFQKV-EKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISL 58
Query: 482 LSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAM-- 539
L ++NH N V L+ + +VFE+ LH + +D + I +
Sbjct: 59 LKELNHPNIVKLLDVIHTENKL--YLVFEF---------LHQDLKKFMDASALTGIPLPL 107
Query: 540 ----------GMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF--------- 580
G+A+C H H+ + HR+L+ ++ + + A K++DF
Sbjct: 108 IKSYLFQLLQGLAFC--HSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 161
Query: 581 -WNNTTAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGR 622
+ + A LL +++S G I EM+T R
Sbjct: 162 TYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/138 (21%), Positives = 55/138 (39%), Gaps = 22/138 (15%)
Query: 555 IAHRNLQSSSIYLTEDYAAKISDFSFWNNTT---------AAKTGSAAMELLETSAVDLE 605
+ HR+L+ +++L +D KI DF A E+L E
Sbjct: 163 VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFE 222
Query: 606 SNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEEL 665
+++S G IL+ ++ G+ + E L+ K E + ++P +
Sbjct: 223 VDIWSLGCILYTLLVGKPPF--ETSCLKETYIRIKKNEYSVPRHINPVASA--------- 271
Query: 666 LVVIKNCVHPDPKQRPSM 683
+I+ +H DP RPS+
Sbjct: 272 --LIRRMLHADPTLRPSV 287
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 55/126 (43%), Gaps = 13/126 (10%)
Query: 506 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSI 565
V EY G L HIQ D + A + L+ +H + I +R+L+ +I
Sbjct: 95 FFVMEYLNGGDLM--YHIQSCHKFDLSRATFYAAEIILGLQFLH--SKGIVYRDLKLDNI 150
Query: 566 YLTEDYAAKISDFSFW--NNTTAAKTGS-------AAMELLETSAVDLESNVYSFGTILF 616
L +D KI+DF N AKT A E+L + + +SFG +L+
Sbjct: 151 LLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLY 210
Query: 617 EMITGR 622
EM+ G+
Sbjct: 211 EMLIGQ 216
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 86/220 (39%), Gaps = 44/220 (20%)
Query: 426 EDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADW-SKNLESQFRKKIDTLSK 484
E+F + +GT G VYK E+ K R D ++ + S ++I L +
Sbjct: 2 ENFQKV-EKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 57
Query: 485 VNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAM----- 539
+NH N V L+ + +VFE+ LH + +D + I +
Sbjct: 58 LNHPNIVKLLDVIHTENKL--YLVFEF---------LHQDLKKFMDASALTGIPLPLIKS 106
Query: 540 -------GMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF----------WN 582
G+A+C H H+ + HR+L+ ++ + + A K++DF +
Sbjct: 107 YLFQLLQGLAFC--HSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT 160
Query: 583 NTTAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGR 622
+ A LL +++S G I EM+T R
Sbjct: 161 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 87/223 (39%), Gaps = 44/223 (19%)
Query: 423 AACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADW-SKNLESQFRKKIDT 481
+ E+F + +GT G VYK E+ K R D ++ + S ++I
Sbjct: 2 GSMENFQKV-EKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISL 57
Query: 482 LSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAM-- 539
L ++NH N V L+ + +VFE+ LH + +D + I +
Sbjct: 58 LKELNHPNIVKLLDVIHTENKL--YLVFEF---------LHQDLKKFMDASALTGIPLPL 106
Query: 540 ----------GMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF--------- 580
G+A+C H H+ + HR+L+ ++ + + A K++DF
Sbjct: 107 IKSYLFQLLQGLAFC--HSHR----VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVR 160
Query: 581 -WNNTTAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGR 622
+ + A LL +++S G I EM+T R
Sbjct: 161 TYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 86/220 (39%), Gaps = 44/220 (20%)
Query: 426 EDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADW-SKNLESQFRKKIDTLSK 484
E+F + +GT G VYK E+ K R D ++ + S ++I L +
Sbjct: 3 ENFQKV-EKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 58
Query: 485 VNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAM----- 539
+NH N V L+ + +VFE+ LH + +D + I +
Sbjct: 59 LNHPNIVKLLDVIHTENKL--YLVFEF---------LHQDLKKFMDASALTGIPLPLIKS 107
Query: 540 -------GMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF----------WN 582
G+A+C H H+ + HR+L+ ++ + + A K++DF +
Sbjct: 108 YLFQLLQGLAFC--HSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT 161
Query: 583 NTTAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGR 622
+ A LL +++S G I EM+T R
Sbjct: 162 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 86/220 (39%), Gaps = 44/220 (20%)
Query: 426 EDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADW-SKNLESQFRKKIDTLSK 484
E+F + +GT G VYK E+ K R D ++ + S ++I L +
Sbjct: 3 ENFQKV-EKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 58
Query: 485 VNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAM----- 539
+NH N V L+ + +VFE+ LH + +D + I +
Sbjct: 59 LNHPNIVKLLDVIHTENKL--YLVFEF---------LHQDLKKFMDASALTGIPLPLIKS 107
Query: 540 -------GMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF----------WN 582
G+A+C H H+ + HR+L+ ++ + + A K++DF +
Sbjct: 108 YLFQLLQGLAFC--HSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT 161
Query: 583 NTTAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGR 622
+ A LL +++S G I EM+T R
Sbjct: 162 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 86/220 (39%), Gaps = 44/220 (20%)
Query: 426 EDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADW-SKNLESQFRKKIDTLSK 484
E+F + +GT G VYK E+ K R D ++ + S ++I L +
Sbjct: 2 ENFQKV-EKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 57
Query: 485 VNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAM----- 539
+NH N V L+ + +VFE+ LH + +D + I +
Sbjct: 58 LNHPNIVKLLDVIHTENKL--YLVFEF---------LHQDLKKFMDASALTGIPLPLIKS 106
Query: 540 -------GMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF----------WN 582
G+A+C H H+ + HR+L+ ++ + + A K++DF +
Sbjct: 107 YLFQLLQGLAFC--HSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT 160
Query: 583 NTTAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGR 622
+ A LL +++S G I EM+T R
Sbjct: 161 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 86/220 (39%), Gaps = 44/220 (20%)
Query: 426 EDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADW-SKNLESQFRKKIDTLSK 484
E+F + +GT G VYK E+ K R D ++ + S ++I L +
Sbjct: 3 ENFQKV-EKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 58
Query: 485 VNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAM----- 539
+NH N V L+ + +VFE+ LH + +D + I +
Sbjct: 59 LNHPNIVKLLDVIHTENKL--YLVFEF---------LHQDLKKFMDASALTGIPLPLIKS 107
Query: 540 -------GMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF----------WN 582
G+A+C H H+ + HR+L+ ++ + + A K++DF +
Sbjct: 108 YLFQLLQGLAFC--HSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT 161
Query: 583 NTTAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGR 622
+ A LL +++S G I EM+T R
Sbjct: 162 HEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 87/223 (39%), Gaps = 44/223 (19%)
Query: 423 AACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADW-SKNLESQFRKKIDT 481
+ E+F + +GT G VYK E+ K R D ++ + S ++I
Sbjct: 1 GSMENFQKV-EKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISL 56
Query: 482 LSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAM-- 539
L ++NH N V L+ + +VFE+ LH + +D + I +
Sbjct: 57 LKELNHPNIVKLLDVIHTENKL--YLVFEF---------LHQDLKKFMDASALTGIPLPL 105
Query: 540 ----------GMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF--------- 580
G+A+C H H+ + HR+L+ ++ + + A K++DF
Sbjct: 106 IKSYLFQLLQGLAFC--HSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 159
Query: 581 -WNNTTAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGR 622
+ + A LL +++S G I EM+T R
Sbjct: 160 TYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 87/223 (39%), Gaps = 44/223 (19%)
Query: 423 AACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADW-SKNLESQFRKKIDT 481
+ E+F + +GT G VYK E+ K R D ++ + S ++I
Sbjct: 1 GSMENFQKV-EKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISL 56
Query: 482 LSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAM-- 539
L ++NH N V L+ + +VFE+ LH + +D + I +
Sbjct: 57 LKELNHPNIVKLLDVIHTENKL--YLVFEF---------LHQDLKKFMDASALTGIPLPL 105
Query: 540 ----------GMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF--------- 580
G+A+C H H+ + HR+L+ ++ + + A K++DF
Sbjct: 106 IKSYLFQLLQGLAFC--HSHR----VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVR 159
Query: 581 -WNNTTAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGR 622
+ + A LL +++S G I EM+T R
Sbjct: 160 TYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 87/222 (39%), Gaps = 44/222 (19%)
Query: 424 ACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADW-SKNLESQFRKKIDTL 482
+ E+F + +GT G VYK E+ K R D ++ + S ++I L
Sbjct: 1 SMENFQKV-EKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLL 56
Query: 483 SKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAM--- 539
++NH N V L+ + +VFE+ LH + +D + I +
Sbjct: 57 KELNHPNIVKLLDVIHTENKL--YLVFEF---------LHQDLKDFMDASALTGIPLPLI 105
Query: 540 ---------GMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF---------- 580
G+A+C H H+ + HR+L+ ++ + + A K++DF
Sbjct: 106 KSYLFQLLQGLAFC--HSHR----VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRT 159
Query: 581 WNNTTAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGR 622
+ + A LL +++S G I EM+T R
Sbjct: 160 YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 88/220 (40%), Gaps = 44/220 (20%)
Query: 426 EDFSNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSK 484
E+F + +GT G VYK +G +A+ + + ++ + S ++I L +
Sbjct: 3 ENFQKV-EKIGEGTYGVVYKARNKLTGEVVALXKIRLDTE---TEGVPSTAIREISLLKE 58
Query: 485 VNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAM----- 539
+NH N V L+ + +VFE+ LH + +D + I +
Sbjct: 59 LNHPNIVKLLDVIHTENKL--YLVFEF---------LHQDLKKFMDASALTGIPLPLIKS 107
Query: 540 -------GMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF----------WN 582
G+A+C H H+ + HR+L+ ++ + + A K++DF +
Sbjct: 108 YLFQLLQGLAFC--HSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT 161
Query: 583 NTTAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGR 622
+ A LL +++S G I EM+T R
Sbjct: 162 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 88/220 (40%), Gaps = 44/220 (20%)
Query: 426 EDFSNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSK 484
E+F + +GT G VYK +G +A+ + + ++ + S ++I L +
Sbjct: 2 ENFQKV-EKIGEGTYGVVYKARNKLTGEVVALXKIRLDTE---TEGVPSTAIREISLLKE 57
Query: 485 VNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAM----- 539
+NH N V L+ + +VFE+ LH + +D + I +
Sbjct: 58 LNHPNIVKLLDVIHTENKL--YLVFEF---------LHQDLKKFMDASALTGIPLPLIKS 106
Query: 540 -------GMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF----------WN 582
G+A+C H H+ + HR+L+ ++ + + A K++DF +
Sbjct: 107 YLFQLLQGLAFC--HSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT 160
Query: 583 NTTAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGR 622
+ A LL +++S G I EM+T R
Sbjct: 161 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 55/126 (43%), Gaps = 13/126 (10%)
Query: 506 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSI 565
V EY G L HIQ D + A + L+ +H + I +R+L+ +I
Sbjct: 94 FFVMEYLNGGDLM--YHIQSCHKFDLSRATFYAAEIILGLQFLH--SKGIVYRDLKLDNI 149
Query: 566 YLTEDYAAKISDFSFW--NNTTAAKTGS-------AAMELLETSAVDLESNVYSFGTILF 616
L +D KI+DF N AKT A E+L + + +SFG +L+
Sbjct: 150 LLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLY 209
Query: 617 EMITGR 622
EM+ G+
Sbjct: 210 EMLIGQ 215
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 87/222 (39%), Gaps = 44/222 (19%)
Query: 424 ACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADW-SKNLESQFRKKIDTL 482
+ E+F + +GT G VYK E+ K R D ++ + S ++I L
Sbjct: 1 SMENFQKV-EKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLL 56
Query: 483 SKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAM--- 539
++NH N V L+ + +VFE+ LH + +D + I +
Sbjct: 57 KELNHPNIVKLLDVIHTENKL--YLVFEF---------LHQDLKKFMDASALTGIPLPLI 105
Query: 540 ---------GMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF---------- 580
G+A+C H H+ + HR+L+ ++ + + A K++DF
Sbjct: 106 KSYLFQLLQGLAFC--HSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 159
Query: 581 WNNTTAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGR 622
+ + A LL +++S G I EM+T R
Sbjct: 160 YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 87/222 (39%), Gaps = 44/222 (19%)
Query: 424 ACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADW-SKNLESQFRKKIDTL 482
+ E+F + +GT G VYK E+ K R D ++ + S ++I L
Sbjct: 1 SMENFQKV-EKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLL 56
Query: 483 SKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAM--- 539
++NH N V L+ + +VFE+ LH + +D + I +
Sbjct: 57 KELNHPNIVKLLDVIHTENKL--YLVFEF---------LHQDLKKFMDASALTGIPLPLI 105
Query: 540 ---------GMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF---------- 580
G+A+C H H+ + HR+L+ ++ + + A K++DF
Sbjct: 106 KSYLFQLLQGLAFC--HSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 159
Query: 581 WNNTTAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGR 622
+ + A LL +++S G I EM+T R
Sbjct: 160 YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 509 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLT 568
E+ G+L + + + E LD + L + + ++++H + + HR+L+ S+I+L
Sbjct: 113 MEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIH--SKKLIHRDLKPSNIFLV 170
Query: 569 EDYAAKISDF----SFWNN--TTAAKTGSAAMELLETSAVDL--ESNVYSFGTILFEMI 619
+ KI DF S N+ T +K M + S+ D E ++Y+ G IL E++
Sbjct: 171 DTKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 95/228 (41%), Gaps = 32/228 (14%)
Query: 414 PKLKRSELEAAC----EDFSNI--IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADW 467
P R EL E + N+ +GS + G+V + +G+ +AV S R
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDT--KTGLRVAVKKLS---RPFQ 60
Query: 468 SKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAE 527
S + +++ L + H+N + L+ + FT E + L HL +
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLL------DVFTPARSLEEFNDVYLVTHLMGADLN 114
Query: 528 HLDWAMRLR------IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW 581
++ +L + + L+++H + I HR+L+ S++ + ED KI DF
Sbjct: 115 NIVKCQKLTDDHVQFLIYQILRGLKYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Query: 582 NNTTAAKTGSAAMELLETSAVDLES-------NVYSFGTILFEMITGR 622
+T TG A + L + +++S G I+ E++TGR
Sbjct: 173 RHTDDEMTGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 94/228 (41%), Gaps = 32/228 (14%)
Query: 414 PKLKRSELEAAC----EDFSNI--IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADW 467
P R EL E + N+ IGS + G+V + +G+ +AV S R
Sbjct: 11 PTFYRQELNKTIWEVPERYQNLSPIGSGAYGSVCAAFDT--KTGLRVAVKKLS---RPFQ 65
Query: 468 SKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAE 527
S + +++ L + H+N + L+ + FT E + L HL +
Sbjct: 66 SIIHAKRTYRELRLLKHMKHENVIGLL------DVFTPARSLEEFNDVYLVTHLMGADLN 119
Query: 528 HLDWAMRLR------IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW 581
++ +L + + L+++H + I HR+L+ S++ + ED KI DF
Sbjct: 120 NIVKCQKLTDDHVQFLIYQILRGLKYIH--SADIIHRDLKPSNLAVNEDXELKILDFGLA 177
Query: 582 NNTTAAKTGSAAMELLETSAVDLE-------SNVYSFGTILFEMITGR 622
+T TG A + L +++S G I+ E++TGR
Sbjct: 178 RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 87/222 (39%), Gaps = 44/222 (19%)
Query: 424 ACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADW-SKNLESQFRKKIDTL 482
+ E+F + +GT G VYK E+ K R D ++ + S ++I L
Sbjct: 1 SMENFQKV-EKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLL 56
Query: 483 SKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAM--- 539
++NH N V L+ + +VFE+ LH + +D + I +
Sbjct: 57 KELNHPNIVKLLDVIHTENKL--YLVFEF---------LHQDLKKFMDASALTGIPLPLI 105
Query: 540 ---------GMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF---------- 580
G+A+C H H+ + HR+L+ ++ + + A K++DF
Sbjct: 106 KSYLFQLLQGLAFC--HSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 159
Query: 581 WNNTTAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGR 622
+ + A LL +++S G I EM+T R
Sbjct: 160 YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 86/220 (39%), Gaps = 44/220 (20%)
Query: 426 EDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADW-SKNLESQFRKKIDTLSK 484
E+F + +GT G VYK E+ K R D ++ + S ++I L +
Sbjct: 2 ENFQKV-EKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 57
Query: 485 VNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAM----- 539
+NH N V L+ + +VFE+ LH + +D + I +
Sbjct: 58 LNHPNIVKLLDVIHTENKL--YLVFEF---------LHQDLKKFMDASALTGIPLPLIKS 106
Query: 540 -------GMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF----------WN 582
G+A+C H H+ + HR+L+ ++ + + A K++DF +
Sbjct: 107 YLFQLLQGLAFC--HSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX 160
Query: 583 NTTAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGR 622
+ A LL +++S G I EM+T R
Sbjct: 161 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 86/220 (39%), Gaps = 44/220 (20%)
Query: 426 EDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADW-SKNLESQFRKKIDTLSK 484
E+F + +GT G VYK E+ K R D ++ + S ++I L +
Sbjct: 2 ENFQKV-EKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 57
Query: 485 VNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAM----- 539
+NH N V L+ + +VFE+ LH + +D + I +
Sbjct: 58 LNHPNIVKLLDVIHTENKL--YLVFEF---------LHQDLKKFMDASALTGIPLPLIKS 106
Query: 540 -------GMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF----------WN 582
G+A+C H H+ + HR+L+ ++ + + A K++DF +
Sbjct: 107 YLFQLLQGLAFC--HSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX 160
Query: 583 NTTAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGR 622
+ A LL +++S G I EM+T R
Sbjct: 161 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/255 (20%), Positives = 99/255 (38%), Gaps = 37/255 (14%)
Query: 476 RKKIDTLSKVNHKNFVNLIGYC--EEDEPFTRMMVFEYSPNGSLFEHLH--IQEAEHLDW 531
+++ D NH N + L+ YC E ++ + G+L+ + + L
Sbjct: 74 QREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTE 133
Query: 532 AMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGS 591
L + +G+ LE +H AHR+L+ ++I L ++ + D N GS
Sbjct: 134 DQILWLLLGICRGLEAIH--AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGS 191
Query: 592 -AAMELLETSA--------------------VDLESNVYSFGTILFEMITGRISYSIENG 630
A+ L + +A +D ++V+S G +L+ M+ G Y +
Sbjct: 192 RQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDM--- 248
Query: 631 SLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKL 690
+ S L + L P S +L ++ V DP QRP + + ++L
Sbjct: 249 VFQKGDSVALAVQNQLSIPQSPRHSSALWQLLNSMMTV-------DPHQRPHIPLLLSQL 301
Query: 691 KEITAMEPDGATPKL 705
+ + P T ++
Sbjct: 302 EALQPPAPGQHTTQI 316
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 86/220 (39%), Gaps = 44/220 (20%)
Query: 426 EDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADW-SKNLESQFRKKIDTLSK 484
E+F + +GT G VYK E+ K R D ++ + S ++I L +
Sbjct: 4 ENFQKV-EKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 59
Query: 485 VNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAM----- 539
+NH N V L+ + +VFE+ LH + +D + I +
Sbjct: 60 LNHPNIVKLLDVIHTENKL--YLVFEF---------LHQDLKKFMDASALTGIPLPLIKS 108
Query: 540 -------GMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF----------WN 582
G+A+C H H+ + HR+L+ ++ + + A K++DF +
Sbjct: 109 YLFQLLQGLAFC--HSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX 162
Query: 583 NTTAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGR 622
+ A LL +++S G I EM+T R
Sbjct: 163 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 94/228 (41%), Gaps = 32/228 (14%)
Query: 414 PKLKRSELEAAC----EDFSNI--IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADW 467
P R EL E + N+ +GS + G+V + +G+ +AV S R
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDT--KTGLRVAVKKLS---RPFQ 60
Query: 468 SKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAE 527
S + +++ L + H+N + L+ + FT E + L HL +
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLL------DVFTPARSLEEFNDVYLVTHLMGADLN 114
Query: 528 HLDWAMRLR------IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW 581
++ +L + + L+++H + I HR+L+ S++ + ED KI DF
Sbjct: 115 NIVKCQKLTDDHVQFLIYQILRGLKYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Query: 582 NNTTAAKTGSAAMELLETSAVDLE-------SNVYSFGTILFEMITGR 622
+T TG A + L +++S G I+ E++TGR
Sbjct: 173 RHTDDEMTGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 95/228 (41%), Gaps = 32/228 (14%)
Query: 414 PKLKRSELEAAC----EDFSNI--IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADW 467
P R EL E + N+ +GS + G+V + +G+ +AV S R
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDT--KTGLRVAVKKLS---RPFQ 60
Query: 468 SKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAE 527
S + +++ L + H+N + L+ + FT E + L HL +
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLL------DVFTPARSLEEFNDVYLVTHLMGADLN 114
Query: 528 HLDWAMRLR------IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW 581
++ + +L + + L+++H + I HR+L+ S++ + ED KI DF
Sbjct: 115 NIVKSQKLTDDHVQFLIYQILRGLKYIH--SADIIHRDLKPSNLAVNEDSELKILDFGLC 172
Query: 582 NNTTAAKTGSAAMELLETSAVDLE-------SNVYSFGTILFEMITGR 622
+T TG A + L +++S G I+ E++TGR
Sbjct: 173 RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 94/243 (38%), Gaps = 55/243 (22%)
Query: 482 LSKVNHKNFVNLIGYCEEDEPFTRMMV-----------FEYSPNGSLFEHLH---IQEAE 527
L+ +NH+ V E F + M EY N +L++ +H + +
Sbjct: 56 LASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQR 115
Query: 528 HLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN---- 583
W + +I ++Y +H + I HR+L+ +I++ E KI DF N
Sbjct: 116 DEYWRLFRQILEALSY----IH--SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRS 169
Query: 584 ------------------TTAAKTG-SAAMELLE-TSAVDLESNVYSFGTILFEMITGRI 623
T+A T A E+L+ T + + ++YS G I FEMI
Sbjct: 170 LDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI---- 225
Query: 624 SYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSM 683
Y G E + + L+ + F +N ++ +I+ + DP +RP
Sbjct: 226 -YPFSTG------MERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGA 278
Query: 684 RGI 686
R +
Sbjct: 279 RTL 281
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 86/223 (38%), Gaps = 44/223 (19%)
Query: 423 AACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADW-SKNLESQFRKKIDT 481
+ E+F + +GT G VYK E+ K R D ++ + S ++I
Sbjct: 3 GSMENFQKV-EKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISL 58
Query: 482 LSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAM-- 539
L ++NH N V L+ + +VFE+ LH +D + I +
Sbjct: 59 LKELNHPNIVKLLDVIHTENKL--YLVFEF---------LHQDLKTFMDASALTGIPLPL 107
Query: 540 ----------GMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF--------- 580
G+A+C H H+ + HR+L+ ++ + + A K++DF
Sbjct: 108 IKSYLFQLLQGLAFC--HSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 161
Query: 581 -WNNTTAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGR 622
+ + A LL +++S G I EM+T R
Sbjct: 162 TYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 87/222 (39%), Gaps = 44/222 (19%)
Query: 424 ACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADW-SKNLESQFRKKIDTL 482
+ E+F + +GT G VYK E+ K R D ++ + S ++I L
Sbjct: 1 SMENFQKV-EKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLL 56
Query: 483 SKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAM--- 539
++NH N V L+ + +VFE+ LH + +D + I +
Sbjct: 57 KELNHPNIVKLLDVIHTENKL--YLVFEF---------LHQDLKKFMDASALTGIPLPLI 105
Query: 540 ---------GMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF---------- 580
G+A+C H H+ + HR+L+ ++ + + A K++DF
Sbjct: 106 KSYLFQLLQGLAFC--HSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 159
Query: 581 WNNTTAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGR 622
+ + A LL +++S G I EM+T R
Sbjct: 160 YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 75/190 (39%), Gaps = 27/190 (14%)
Query: 400 GLSGQLQKAFVTGVPKLKRSELEAACEDFSNIIGSFSDGTVGTVYKGT-LSSGVEIAV-- 456
G SG+ Q FV +L L + ++G VY+ + SG E A+
Sbjct: 9 GASGRDQSDFVGQTVELGELRL--------RVRRVLAEGGFAFVYEAQDVGSGREYALKR 60
Query: 457 --TSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNL-----IGYCEEDEPFTRMMVF 509
++ K+RA E F KK+ H N V IG E D ++
Sbjct: 61 LLSNEEEKNRAIIQ---EVCFMKKLS-----GHPNIVQFCSAASIGKEESDTGQAEFLLL 112
Query: 510 EYSPNGSLFEHLHIQEAEH-LDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLT 568
G L E L E+ L L+I ++HMH+ PPI HR+L+ ++ L+
Sbjct: 113 TELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLS 172
Query: 569 EDYAAKISDF 578
K+ DF
Sbjct: 173 NQGTIKLCDF 182
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 94/228 (41%), Gaps = 32/228 (14%)
Query: 414 PKLKRSELEAAC----EDFSNI--IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADW 467
P R EL E + N+ +GS + G+V + +G+ +AV S R
Sbjct: 3 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDT--KTGLRVAVKKLS---RPFQ 57
Query: 468 SKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAE 527
S + +++ L + H+N + L+ + FT E + L HL +
Sbjct: 58 SIIHAKRTYRELRLLKHMKHENVIGLL------DVFTPARSLEEFNDVYLVTHLMGADLN 111
Query: 528 HLDWAMRLR------IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW 581
++ +L + + L+++H + I HR+L+ S++ + ED KI DF
Sbjct: 112 NIVKCQKLTDDHVQFLIYQILRGLKYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLA 169
Query: 582 NNTTAAKTGSAAMELLETSAVDLE-------SNVYSFGTILFEMITGR 622
+T TG A + L +++S G I+ E++TGR
Sbjct: 170 RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 94/228 (41%), Gaps = 32/228 (14%)
Query: 414 PKLKRSELEAAC----EDFSNI--IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADW 467
P R EL E + N+ +GS + G+V + +G+ +AV S R
Sbjct: 4 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDT--KTGLRVAVKKLS---RPFQ 58
Query: 468 SKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAE 527
S + +++ L + H+N + L+ + FT E + L HL +
Sbjct: 59 SIIHAKRTYRELRLLKHMKHENVIGLL------DVFTPARSLEEFNDVYLVTHLMGADLN 112
Query: 528 HLDWAMRLR------IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW 581
++ +L + + L+++H + I HR+L+ S++ + ED KI DF
Sbjct: 113 NIVKCQKLTDDHVQFLIYQILRGLKYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLA 170
Query: 582 NNTTAAKTGSAAMELLETSAVDLE-------SNVYSFGTILFEMITGR 622
+T TG A + L +++S G I+ E++TGR
Sbjct: 171 RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 94/228 (41%), Gaps = 32/228 (14%)
Query: 414 PKLKRSELEAAC----EDFSNI--IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADW 467
P R EL E + N+ +GS + G+V + +G+ +AV S R
Sbjct: 13 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDT--KTGLRVAVKKLS---RPFQ 67
Query: 468 SKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAE 527
S + +++ L + H+N + L+ + FT E + L HL +
Sbjct: 68 SIIHAKRTYRELRLLKHMKHENVIGLL------DVFTPARSLEEFNDVYLVTHLMGADLN 121
Query: 528 HLDWAMRLR------IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW 581
++ +L + + L+++H + I HR+L+ S++ + ED KI DF
Sbjct: 122 NIVKCQKLTDDHVQFLIYQILRGLKYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLA 179
Query: 582 NNTTAAKTGSAAMELLETSAVDLE-------SNVYSFGTILFEMITGR 622
+T TG A + L +++S G I+ E++TGR
Sbjct: 180 RHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 94/228 (41%), Gaps = 32/228 (14%)
Query: 414 PKLKRSELEAAC----EDFSNI--IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADW 467
P R EL E + N+ +GS + G+V + +G+ +AV S R
Sbjct: 17 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDT--KTGLRVAVKKLS---RPFQ 71
Query: 468 SKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAE 527
S + +++ L + H+N + L+ + FT E + L HL +
Sbjct: 72 SIIHAKRTYRELRLLKHMKHENVIGLL------DVFTPARSLEEFNDVYLVTHLMGADLN 125
Query: 528 HLDWAMRLR------IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW 581
++ +L + + L+++H + I HR+L+ S++ + ED KI DF
Sbjct: 126 NIVKCQKLTDDHVQFLIYQILRGLKYIH--SADIIHRDLKPSNLAVNEDXELKILDFGLA 183
Query: 582 NNTTAAKTGSAAMELLETSAVDLE-------SNVYSFGTILFEMITGR 622
+T TG A + L +++S G I+ E++TGR
Sbjct: 184 RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 94/228 (41%), Gaps = 32/228 (14%)
Query: 414 PKLKRSELEAAC----EDFSNI--IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADW 467
P R EL E + N+ +GS + G+V + +G+ +AV S R
Sbjct: 13 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDT--KTGLRVAVKKLS---RPFQ 67
Query: 468 SKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAE 527
S + +++ L + H+N + L+ + FT E + L HL +
Sbjct: 68 SIIHAKRTYRELRLLKHMKHENVIGLL------DVFTPARSLEEFNDVYLVTHLMGADLN 121
Query: 528 HLDWAMRLR------IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW 581
++ +L + + L+++H + I HR+L+ S++ + ED KI DF
Sbjct: 122 NIVKCQKLTDDHVQFLIYQILRGLKYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLA 179
Query: 582 NNTTAAKTGSAAMELLETSAVDLE-------SNVYSFGTILFEMITGR 622
+T TG A + L +++S G I+ E++TGR
Sbjct: 180 RHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 94/228 (41%), Gaps = 32/228 (14%)
Query: 414 PKLKRSELEAAC----EDFSNI--IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADW 467
P R EL E + N+ +GS + G+V + +G+ +AV S R
Sbjct: 11 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDT--KTGLRVAVKKLS---RPFQ 65
Query: 468 SKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAE 527
S + +++ L + H+N + L+ + FT E + L HL +
Sbjct: 66 SIIHAKRTYRELRLLKHMKHENVIGLL------DVFTPARSLEEFNDVYLVTHLMGADLN 119
Query: 528 HLDWAMRLR------IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW 581
++ +L + + L+++H + I HR+L+ S++ + ED KI DF
Sbjct: 120 NIVKCQKLTDDHVQFLIYQILRGLKYIH--SADIIHRDLKPSNLAVNEDXELKILDFGLA 177
Query: 582 NNTTAAKTGSAAMELLETSAVDLE-------SNVYSFGTILFEMITGR 622
+T TG A + L +++S G I+ E++TGR
Sbjct: 178 RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 94/228 (41%), Gaps = 32/228 (14%)
Query: 414 PKLKRSELEAAC----EDFSNI--IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADW 467
P R EL E + N+ +GS + G+V + +G+ +AV S R
Sbjct: 25 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDT--KTGLRVAVKKLS---RPFQ 79
Query: 468 SKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAE 527
S + +++ L + H+N + L+ + FT E + L HL +
Sbjct: 80 SIIHAKRTYRELRLLKHMKHENVIGLL------DVFTPARSLEEFNDVYLVTHLMGADLN 133
Query: 528 HLDWAMRLR------IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW 581
++ +L + + L+++H + I HR+L+ S++ + ED KI DF
Sbjct: 134 NIVKCQKLTDDHVQFLIYQILRGLKYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLA 191
Query: 582 NNTTAAKTGSAAMELLETSAVDLE-------SNVYSFGTILFEMITGR 622
+T TG A + L +++S G I+ E++TGR
Sbjct: 192 RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 94/228 (41%), Gaps = 32/228 (14%)
Query: 414 PKLKRSELEAAC----EDFSNI--IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADW 467
P R EL E + N+ +GS + G+V + +G+ +AV S R
Sbjct: 26 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDT--KTGLRVAVKKLS---RPFQ 80
Query: 468 SKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAE 527
S + +++ L + H+N + L+ + FT E + L HL +
Sbjct: 81 SIIHAKRTYRELRLLKHMKHENVIGLL------DVFTPARSLEEFNDVYLVTHLMGADLN 134
Query: 528 HLDWAMRLR------IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW 581
++ +L + + L+++H + I HR+L+ S++ + ED KI DF
Sbjct: 135 NIVKCQKLTDDHVQFLIYQILRGLKYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLA 192
Query: 582 NNTTAAKTGSAAMELLETSAVDLE-------SNVYSFGTILFEMITGR 622
+T TG A + L +++S G I+ E++TGR
Sbjct: 193 RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 94/228 (41%), Gaps = 32/228 (14%)
Query: 414 PKLKRSELEAAC----EDFSNI--IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADW 467
P R EL E + N+ +GS + G+V + +G+ +AV S R
Sbjct: 3 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDT--KTGLRVAVKKLS---RPFQ 57
Query: 468 SKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAE 527
S + +++ L + H+N + L+ + FT E + L HL +
Sbjct: 58 SIIHAKRTYRELRLLKHMKHENVIGLL------DVFTPARSLEEFNDVYLVTHLMGADLN 111
Query: 528 HLDWAMRLR------IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW 581
++ +L + + L+++H + I HR+L+ S++ + ED KI DF
Sbjct: 112 NIVKCQKLTDDHVQFLIYQILRGLKYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLA 169
Query: 582 NNTTAAKTGSAAMELLETSAVDLE-------SNVYSFGTILFEMITGR 622
+T TG A + L +++S G I+ E++TGR
Sbjct: 170 RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 94/228 (41%), Gaps = 32/228 (14%)
Query: 414 PKLKRSELEAAC----EDFSNI--IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADW 467
P R EL E + N+ +GS + G+V + +G+ +AV S R
Sbjct: 2 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDT--KTGLRVAVKKLS---RPFQ 56
Query: 468 SKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAE 527
S + +++ L + H+N + L+ + FT E + L HL +
Sbjct: 57 SIIHAKRTYRELRLLKHMKHENVIGLL------DVFTPARSLEEFNDVYLVTHLMGADLN 110
Query: 528 HLDWAMRLR------IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW 581
++ +L + + L+++H + I HR+L+ S++ + ED KI DF
Sbjct: 111 NIVKCQKLTDDHVQFLIYQILRGLKYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLA 168
Query: 582 NNTTAAKTGSAAMELLETSAVDLE-------SNVYSFGTILFEMITGR 622
+T TG A + L +++S G I+ E++TGR
Sbjct: 169 RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 94/228 (41%), Gaps = 32/228 (14%)
Query: 414 PKLKRSELEAAC----EDFSNI--IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADW 467
P R EL E + N+ +GS + G+V + +G+ +AV S R
Sbjct: 13 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDT--KTGLRVAVKKLS---RPFQ 67
Query: 468 SKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAE 527
S + +++ L + H+N + L+ + FT E + L HL +
Sbjct: 68 SIIHAKRTYRELRLLKHMKHENVIGLL------DVFTPARSLEEFNDVYLVTHLMGADLN 121
Query: 528 HLDWAMRLR------IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW 581
++ +L + + L+++H + I HR+L+ S++ + ED KI DF
Sbjct: 122 NIVKCQKLTDDHVQFLIYQILRGLKYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLA 179
Query: 582 NNTTAAKTGSAAMELLETSAVDLE-------SNVYSFGTILFEMITGR 622
+T TG A + L +++S G I+ E++TGR
Sbjct: 180 RHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 94/228 (41%), Gaps = 32/228 (14%)
Query: 414 PKLKRSELEAAC----EDFSNI--IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADW 467
P R EL E + N+ +GS + G+V + +G+ +AV S R
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDT--KTGLRVAVKKLS---RPFQ 60
Query: 468 SKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAE 527
S + +++ L + H+N + L+ + FT E + L HL +
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLL------DVFTPARSLEEFNDVYLVTHLMGADLN 114
Query: 528 HLDWAMRLR------IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW 581
++ +L + + L+++H + I HR+L+ S++ + ED KI DF
Sbjct: 115 NIVKCQKLTDDHVQFLIYQILRGLKYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Query: 582 NNTTAAKTGSAAMELLETSAVDLE-------SNVYSFGTILFEMITGR 622
+T TG A + L +++S G I+ E++TGR
Sbjct: 173 RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 94/228 (41%), Gaps = 32/228 (14%)
Query: 414 PKLKRSELEAAC----EDFSNI--IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADW 467
P R EL E + N+ +GS + G+V + +G+ +AV S R
Sbjct: 12 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDT--KTGLRVAVKKLS---RPFQ 66
Query: 468 SKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAE 527
S + +++ L + H+N + L+ + FT E + L HL +
Sbjct: 67 SIIHAKRTYRELRLLKHMKHENVIGLL------DVFTPARSLEEFNDVYLVTHLMGADLN 120
Query: 528 HLDWAMRLR------IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW 581
++ +L + + L+++H + I HR+L+ S++ + ED KI DF
Sbjct: 121 NIVKCQKLTDDHVQFLIYQILRGLKYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLA 178
Query: 582 NNTTAAKTGSAAMELLETSAVDLE-------SNVYSFGTILFEMITGR 622
+T TG A + L +++S G I+ E++TGR
Sbjct: 179 RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 94/228 (41%), Gaps = 32/228 (14%)
Query: 414 PKLKRSELEAAC----EDFSNI--IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADW 467
P R EL E + N+ +GS + G+V + +G+ +AV S R
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDT--KTGLRVAVKKLS---RPFQ 60
Query: 468 SKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAE 527
S + +++ L + H+N + L+ + FT E + L HL +
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLL------DVFTPARSLEEFNDVYLVTHLMGADLN 114
Query: 528 HLDWAMRLR------IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW 581
++ +L + + L+++H + I HR+L+ S++ + ED KI DF
Sbjct: 115 NIVKCQKLTDDHVQFLIYQILRGLKYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Query: 582 NNTTAAKTGSAAMELLETSAVDLE-------SNVYSFGTILFEMITGR 622
+T TG A + L +++S G I+ E++TGR
Sbjct: 173 RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 94/228 (41%), Gaps = 32/228 (14%)
Query: 414 PKLKRSELEAAC----EDFSNI--IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADW 467
P R EL E + N+ +GS + G+V + +G+ +AV S R
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDT--KTGLRVAVKKLS---RPFQ 60
Query: 468 SKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAE 527
S + +++ L + H+N + L+ + FT E + L HL +
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLL------DVFTPARSLEEFNDVYLVTHLMGADLN 114
Query: 528 HLDWAMRLR------IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW 581
++ +L + + L+++H + I HR+L+ S++ + ED KI DF
Sbjct: 115 NIVKCQKLTDDHVQFLIYQILRGLKYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Query: 582 NNTTAAKTGSAAMELLETSAVDLE-------SNVYSFGTILFEMITGR 622
+T TG A + L +++S G I+ E++TGR
Sbjct: 173 RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 94/228 (41%), Gaps = 32/228 (14%)
Query: 414 PKLKRSELEAAC----EDFSNI--IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADW 467
P R EL E + N+ +GS + G+V + +G+ +AV S R
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDT--KTGLRVAVKKLS---RPFQ 60
Query: 468 SKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAE 527
S + +++ L + H+N + L+ + FT E + L HL +
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLL------DVFTPARSLEEFNDVYLVTHLMGADLN 114
Query: 528 HLDWAMRLR------IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW 581
++ +L + + L+++H + I HR+L+ S++ + ED KI DF
Sbjct: 115 NIVKCQKLTDDHVQFLIYQILRGLKYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Query: 582 NNTTAAKTGSAAMELLETSAVDLE-------SNVYSFGTILFEMITGR 622
+T TG A + L +++S G I+ E++TGR
Sbjct: 173 RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 94/228 (41%), Gaps = 32/228 (14%)
Query: 414 PKLKRSELEAAC----EDFSNI--IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADW 467
P R EL E + N+ +GS + G+V + +G+ +AV S R
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDT--KTGLRVAVKKLS---RPFQ 60
Query: 468 SKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAE 527
S + +++ L + H+N + L+ + FT E + L HL +
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLL------DVFTPARSLEEFNDVYLVTHLMGADLN 114
Query: 528 HLDWAMRLR------IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW 581
++ +L + + L+++H + I HR+L+ S++ + ED KI DF
Sbjct: 115 NIVKCQKLTDDHVQFLIYQILRGLKYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Query: 582 NNTTAAKTGSAAMELLETSAVDLE-------SNVYSFGTILFEMITGR 622
+T TG A + L +++S G I+ E++TGR
Sbjct: 173 RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 94/228 (41%), Gaps = 32/228 (14%)
Query: 414 PKLKRSELEAAC----EDFSNI--IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADW 467
P R EL E + N+ +GS + G+V + +G+ +AV S R
Sbjct: 11 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDT--KTGLRVAVKKLS---RPFQ 65
Query: 468 SKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAE 527
S + +++ L + H+N + L+ + FT E + L HL +
Sbjct: 66 SIIHAKRTYRELRLLKHMKHENVIGLL------DVFTPARSLEEFNDVYLVTHLMGADLN 119
Query: 528 HLDWAMRLR------IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW 581
++ +L + + L+++H + I HR+L+ S++ + ED KI DF
Sbjct: 120 NIVKCQKLTDDHVQFLIYQILRGLKYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLA 177
Query: 582 NNTTAAKTGSAAMELLETSAVDLE-------SNVYSFGTILFEMITGR 622
+T TG A + L +++S G I+ E++TGR
Sbjct: 178 RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 90/219 (41%), Gaps = 23/219 (10%)
Query: 474 QFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAM 533
Q ++I L K++H N V L+ ++ MVFE G + E + + L
Sbjct: 82 QVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVME---VPTLKPLSEDQ 138
Query: 534 RLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWN----------N 583
+ +E++H I HR+++ S++ + ED KI+DF N N
Sbjct: 139 ARFYFQDLIKGIEYLHYQK--IIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSN 196
Query: 584 TTAAKTGSAAMELLETSAV--DLESNVYSFGTILFEMITGRISYSIE-----NGSLENWA 636
T A L ET + +V++ G L+ + G+ + E + +++ A
Sbjct: 197 TVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQA 256
Query: 637 SEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHP 675
E+ +D+ D + +N E +VV + +HP
Sbjct: 257 LEFPDQPDIAEDLKDLITRMLDKNP-ESRIVVPEIKLHP 294
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 94/228 (41%), Gaps = 32/228 (14%)
Query: 414 PKLKRSELEAAC----EDFSNI--IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADW 467
P R EL E + N+ +GS + G+V + +G+ +AV S R
Sbjct: 29 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDT--KTGLRVAVKKLS---RPFQ 83
Query: 468 SKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAE 527
S + +++ L + H+N + L+ + FT E + L HL +
Sbjct: 84 SIIHAKRTYRELRLLKHMKHENVIGLL------DVFTPARSLEEFNDVYLVTHLMGADLN 137
Query: 528 HLDWAMRLR------IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW 581
++ +L + + L+++H + I HR+L+ S++ + ED KI DF
Sbjct: 138 NIVKCQKLTDDHVQFLIYQILRGLKYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLA 195
Query: 582 NNTTAAKTGSAAMELLETSAVDLE-------SNVYSFGTILFEMITGR 622
+T TG A + L +++S G I+ E++TGR
Sbjct: 196 RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 94/228 (41%), Gaps = 32/228 (14%)
Query: 414 PKLKRSELEAAC----EDFSNI--IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADW 467
P R EL E + N+ +GS + G+V + +G+ +AV S R
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDT--KTGLRVAVKKLS---RPFQ 60
Query: 468 SKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAE 527
S + +++ L + H+N + L+ + FT E + L HL +
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLL------DVFTPARSLEEFNDVYLVTHLMGADLN 114
Query: 528 HLDWAMRLR------IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW 581
++ +L + + L+++H + I HR+L+ S++ + ED KI DF
Sbjct: 115 NIVKCQKLTDDHVQFLIYQILRGLKYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Query: 582 NNTTAAKTGSAAMELLETSAVDLE-------SNVYSFGTILFEMITGR 622
+T TG A + L +++S G I+ E++TGR
Sbjct: 173 RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 94/228 (41%), Gaps = 32/228 (14%)
Query: 414 PKLKRSELEAAC----EDFSNI--IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADW 467
P R EL E + N+ +GS + G+V + +G+ +AV S R
Sbjct: 8 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDT--KTGLRVAVKKLS---RPFQ 62
Query: 468 SKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAE 527
S + +++ L + H+N + L+ + FT E + L HL +
Sbjct: 63 SIIHAKRTYRELRLLKHMKHENVIGLL------DVFTPARSLEEFNDVYLVTHLMGADLN 116
Query: 528 HLDWAMRLR------IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW 581
++ +L + + L+++H + I HR+L+ S++ + ED KI DF
Sbjct: 117 NIVKCQKLTDDHVQFLIYQILRGLKYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLA 174
Query: 582 NNTTAAKTGSAAMELLETSAVDLE-------SNVYSFGTILFEMITGR 622
+T TG A + L +++S G I+ E++TGR
Sbjct: 175 RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 94/228 (41%), Gaps = 32/228 (14%)
Query: 414 PKLKRSELEAAC----EDFSNI--IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADW 467
P R EL E + N+ +GS + G+V + +G+ +AV S R
Sbjct: 17 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDT--KTGLRVAVKKLS---RPFQ 71
Query: 468 SKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAE 527
S + +++ L + H+N + L+ + FT E + L HL +
Sbjct: 72 SIIHAKRTYRELRLLKHMKHENVIGLL------DVFTPARSLEEFNDVYLVTHLMGADLN 125
Query: 528 HLDWAMRLR------IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW 581
++ +L + + L+++H + I HR+L+ S++ + ED KI DF
Sbjct: 126 NIVKCQKLTDDHVQFLIYQILRGLKYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLA 183
Query: 582 NNTTAAKTGSAAMELLETSAVDLE-------SNVYSFGTILFEMITGR 622
+T TG A + L +++S G I+ E++TGR
Sbjct: 184 RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 94/228 (41%), Gaps = 32/228 (14%)
Query: 414 PKLKRSELEAAC----EDFSNI--IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADW 467
P R EL E + N+ +GS + G+V + +G+ +AV S R
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDT--KTGLRVAVKKLS---RPFQ 60
Query: 468 SKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAE 527
S + +++ L + H+N + L+ + FT E + L HL +
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLL------DVFTPARSLEEFNDVYLVTHLMGADLN 114
Query: 528 HLDWAMRLR------IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW 581
++ +L + + L+++H + I HR+L+ S++ + ED KI DF
Sbjct: 115 NIVKXQKLTDDHVQFLIYQILRGLKYIH--SADIIHRDLKPSNLAVNEDXELKILDFGLA 172
Query: 582 NNTTAAKTGSAAMELLETSAVDLE-------SNVYSFGTILFEMITGR 622
+T TG A + L +++S G I+ E++TGR
Sbjct: 173 RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 94/228 (41%), Gaps = 32/228 (14%)
Query: 414 PKLKRSELEAAC----EDFSNI--IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADW 467
P R EL E + N+ +GS + G+V + +G+ +AV S R
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDT--KTGLRVAVKKLS---RPFQ 60
Query: 468 SKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAE 527
S + +++ L + H+N + L+ + FT E + L HL +
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLL------DVFTPARSLEEFNDVYLVTHLMGADLN 114
Query: 528 HLDWAMRLR------IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW 581
++ +L + + L+++H + I HR+L+ S++ + ED KI DF
Sbjct: 115 NIVKCQKLTDDHVQFLIYQILRGLKYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Query: 582 NNTTAAKTGSAAMELLETSAVDLE-------SNVYSFGTILFEMITGR 622
+T TG A + L +++S G I+ E++TGR
Sbjct: 173 RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 94/228 (41%), Gaps = 32/228 (14%)
Query: 414 PKLKRSELEAAC----EDFSNI--IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADW 467
P R EL E + N+ +GS + G+V + +G+ +AV S R
Sbjct: 18 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDT--KTGLRVAVKKLS---RPFQ 72
Query: 468 SKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAE 527
S + +++ L + H+N + L+ + FT E + L HL +
Sbjct: 73 SIIHAKRTYRELRLLKHMKHENVIGLL------DVFTPARSLEEFNDVYLVTHLMGADLN 126
Query: 528 HLDWAMRLR------IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW 581
++ +L + + L+++H + I HR+L+ S++ + ED KI DF
Sbjct: 127 NIVKCQKLTDDHVQFLIYQILRGLKYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLA 184
Query: 582 NNTTAAKTGSAAMELLETSAVDLE-------SNVYSFGTILFEMITGR 622
+T TG A + L +++S G I+ E++TGR
Sbjct: 185 RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 94/228 (41%), Gaps = 32/228 (14%)
Query: 414 PKLKRSELEAAC----EDFSNI--IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADW 467
P R EL E + N+ +GS + G+V + +G+ +AV S R
Sbjct: 18 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDT--KTGLRVAVKKLS---RPFQ 72
Query: 468 SKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAE 527
S + +++ L + H+N + L+ + FT E + L HL +
Sbjct: 73 SIIHAKRTYRELRLLKHMKHENVIGLL------DVFTPARSLEEFNDVYLVTHLMGADLN 126
Query: 528 HLDWAMRLR------IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW 581
++ +L + + L+++H + I HR+L+ S++ + ED KI DF
Sbjct: 127 NIVKCQKLTDDHVQFLIYQILRGLKYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLA 184
Query: 582 NNTTAAKTGSAAMELLETSAVDLE-------SNVYSFGTILFEMITGR 622
+T TG A + L +++S G I+ E++TGR
Sbjct: 185 RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 94/228 (41%), Gaps = 32/228 (14%)
Query: 414 PKLKRSELEAAC----EDFSNI--IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADW 467
P R EL E + N+ +GS + G+V + +G+ +AV S R
Sbjct: 8 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDT--KTGLRVAVKKLS---RPFQ 62
Query: 468 SKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAE 527
S + +++ L + H+N + L+ + FT E + L HL +
Sbjct: 63 SIIHAKRTYRELRLLKHMKHENVIGLL------DVFTPARSLEEFNDVYLVTHLMGADLN 116
Query: 528 HLDWAMRLR------IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW 581
++ +L + + L+++H + I HR+L+ S++ + ED KI DF
Sbjct: 117 NIVKCQKLTDDHVQFLIYQILRGLKYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLA 174
Query: 582 NNTTAAKTGSAAMELLETSAVDLE-------SNVYSFGTILFEMITGR 622
+T TG A + L +++S G I+ E++TGR
Sbjct: 175 RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 86/220 (39%), Gaps = 44/220 (20%)
Query: 426 EDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADW-SKNLESQFRKKIDTLSK 484
E+F + +GT G VYK E+ K R D ++ + S ++I L +
Sbjct: 3 ENFQKV-EKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 58
Query: 485 VNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAM----- 539
+NH N V L+ + +VFE+ LH + +D + I +
Sbjct: 59 LNHPNIVKLLDVIHTENKL--YLVFEF---------LHQDLKKFMDASALTGIPLPLIKS 107
Query: 540 -------GMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF----------WN 582
G+++C H H+ + HR+L+ ++ + + A K++DF +
Sbjct: 108 YLFQLLQGLSFC--HSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT 161
Query: 583 NTTAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGR 622
+ A LL +++S G I EM+T R
Sbjct: 162 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 94/228 (41%), Gaps = 32/228 (14%)
Query: 414 PKLKRSELEAAC----EDFSNI--IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADW 467
P R EL E + N+ +GS + G+V + +G+ +AV S R
Sbjct: 8 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDT--KTGLRVAVKKLS---RPFQ 62
Query: 468 SKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAE 527
S + +++ L + H+N + L+ + FT E + L HL +
Sbjct: 63 SIIHAKRTYRELRLLKHMKHENVIGLL------DVFTPARSLEEFNDVYLVTHLMGADLN 116
Query: 528 HLDWAMRLR------IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW 581
++ +L + + L+++H + I HR+L+ S++ + ED KI DF
Sbjct: 117 NIVKCQKLTDDHVQFLIYQILRGLKYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLA 174
Query: 582 NNTTAAKTGSAAMELLETSAVDLE-------SNVYSFGTILFEMITGR 622
+T TG A + L +++S G I+ E++TGR
Sbjct: 175 RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 94/228 (41%), Gaps = 32/228 (14%)
Query: 414 PKLKRSELEAAC----EDFSNI--IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADW 467
P R EL E + N+ +GS + G+V + +G+ +AV S R
Sbjct: 13 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDT--KTGLRVAVKKLS---RPFQ 67
Query: 468 SKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAE 527
S + +++ L + H+N + L+ + FT E + L HL +
Sbjct: 68 SIIHAKRTYRELRLLKHMKHENVIGLL------DVFTPARSLEEFNDVYLVTHLMGADLN 121
Query: 528 HLDWAMRLR------IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW 581
++ +L + + L+++H + I HR+L+ S++ + ED KI DF
Sbjct: 122 NIVKCQKLTDDHVQFLIYQILRGLKYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLA 179
Query: 582 NNTTAAKTGSAAMELLETSAVDLE-------SNVYSFGTILFEMITGR 622
+T TG A + L +++S G I+ E++TGR
Sbjct: 180 RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 94/228 (41%), Gaps = 32/228 (14%)
Query: 414 PKLKRSELEAAC----EDFSNI--IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADW 467
P R EL E + N+ +GS + G+V + +G+ +AV S R
Sbjct: 11 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDT--KTGLRVAVKKLS---RPFQ 65
Query: 468 SKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAE 527
S + +++ L + H+N + L+ + FT E + L HL +
Sbjct: 66 SIIHAKRTYRELRLLKHMKHENVIGLL------DVFTPARSLEEFNDVYLVTHLMGADLN 119
Query: 528 HLDWAMRLR------IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW 581
++ +L + + L+++H + I HR+L+ S++ + ED KI DF
Sbjct: 120 NIVKCQKLTDDHVQFLIYQILRGLKYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLA 177
Query: 582 NNTTAAKTGSAAMELLETSAVDLE-------SNVYSFGTILFEMITGR 622
+T TG A + L +++S G I+ E++TGR
Sbjct: 178 RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 94/228 (41%), Gaps = 32/228 (14%)
Query: 414 PKLKRSELEAAC----EDFSNI--IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADW 467
P R EL E + N+ +GS + G+V + +G+ +AV S R
Sbjct: 12 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDT--KTGLRVAVKKLS---RPFQ 66
Query: 468 SKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAE 527
S + +++ L + H+N + L+ + FT E + L HL +
Sbjct: 67 SIIHAKRTYRELRLLKHMKHENVIGLL------DVFTPARSLEEFNDVYLVTHLMGADLN 120
Query: 528 HLDWAMRLR------IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW 581
++ +L + + L+++H + I HR+L+ S++ + ED KI DF
Sbjct: 121 NIVKCQKLTDDHVQFLIYQILRGLKYIH--SADIIHRDLKPSNLAVNEDSELKILDFGLA 178
Query: 582 NNTTAAKTGSAAMELLETSAVDLE-------SNVYSFGTILFEMITGR 622
+T TG A + L +++S G I+ E++TGR
Sbjct: 179 RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 94/228 (41%), Gaps = 32/228 (14%)
Query: 414 PKLKRSELEAAC----EDFSNI--IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADW 467
P R EL E + N+ +GS + G+V + +G+ +AV S R
Sbjct: 5 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDT--KTGLRVAVKKLS---RPFQ 59
Query: 468 SKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAE 527
S + +++ L + H+N + L+ + FT E + L HL +
Sbjct: 60 SIIHAKRTYRELRLLKHMKHENVIGLL------DVFTPARSLEEFNDVYLVTHLMGADLN 113
Query: 528 HLDWAMRLR------IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW 581
++ +L + + L+++H + I HR+L+ S++ + ED KI DF
Sbjct: 114 NIVKCQKLTDDHVQFLIYQILRGLKYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLA 171
Query: 582 NNTTAAKTGSAAMELLETSAVDLE-------SNVYSFGTILFEMITGR 622
+T TG A + L +++S G I+ E++TGR
Sbjct: 172 RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 94/228 (41%), Gaps = 32/228 (14%)
Query: 414 PKLKRSELEAAC----EDFSNI--IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADW 467
P R EL E + N+ +GS + G+V + +G+ +AV S R
Sbjct: 8 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDT--KTGLRVAVKKLS---RPFQ 62
Query: 468 SKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAE 527
S + +++ L + H+N + L+ + FT E + L HL +
Sbjct: 63 SIIHAKRTYRELRLLKHMKHENVIGLL------DVFTPARSLEEFNDVYLVTHLMGADLN 116
Query: 528 HLDWAMRLR------IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW 581
++ +L + + L+++H + I HR+L+ S++ + ED KI DF
Sbjct: 117 NIVKCQKLTDDHVQFLIYQILRGLKYIH--SADIIHRDLKPSNLAVNEDSELKILDFGLA 174
Query: 582 NNTTAAKTGSAAMELLETSAVDLE-------SNVYSFGTILFEMITGR 622
+T TG A + L +++S G I+ E++TGR
Sbjct: 175 RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 95/223 (42%), Gaps = 24/223 (10%)
Query: 415 KLKRSELEAACEDFSNIIGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLES 473
KL L E+ +++ +G+ G+VYK +G +A+ V+S
Sbjct: 17 KLDEDSLTKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDL-------Q 69
Query: 474 QFRKKIDTLSKVNHKNFVNLIG-YCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWA 532
+ K+I + + + + V G Y + + + +V EY GS+ + + ++ + L
Sbjct: 70 EIIKEISIMQQCDSPHVVKYYGSYFKNTDLW---IVMEYCGAGSVSDIIRLRN-KTLTED 125
Query: 533 MRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT--AAKTG 590
I LE++H + HR++++ +I L + AK++DF T AK
Sbjct: 126 EIATILQSTLKGLEYLHFMRK--IHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRN 183
Query: 591 SA-------AMELLETSAVDLESNVYSFGTILFEMITGRISYS 626
A E+++ + ++++S G EM G+ Y+
Sbjct: 184 XVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYA 226
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 73/155 (47%), Gaps = 14/155 (9%)
Query: 478 KIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLH--IQEAEHLDWAMRL 535
+++ L ++ H N V + T +V EY G L + +E ++LD L
Sbjct: 55 EVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVL 114
Query: 536 RIAMGMAYCLEHMHQLTP---PIAHRNLQSSSIYLTEDYAAKISDFSFW----NNTTAAK 588
R+ + L+ H+ + + HR+L+ ++++L K+ DF ++T+ AK
Sbjct: 115 RVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAK 174
Query: 589 --TGS---AAMELLETSAVDLESNVYSFGTILFEM 618
G+ + E + + + +S+++S G +L+E+
Sbjct: 175 AFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 87/215 (40%), Gaps = 28/215 (13%)
Query: 423 AACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADW-SKNLESQFRKKIDT 481
+ E+F + +GT G VYK E+ K R D ++ + S ++I
Sbjct: 3 GSMENFQKV-EKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISL 58
Query: 482 LSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAM----RLRI 537
L ++NH N V L+ + +VFE+ + L + + + + ++
Sbjct: 59 LKELNHPNIVKLLDVIHTENKL--YLVFEHV-DQDLKKFMDASALTGIPLPLIKSYLFQL 115
Query: 538 AMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF----------WNNTTAA 587
G+A+C H H+ + HR+L+ ++ + + A K++DF + +
Sbjct: 116 LQGLAFC--HSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVT 169
Query: 588 KTGSAAMELLETSAVDLESNVYSFGTILFEMITGR 622
A LL +++S G I EM+T R
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 87/215 (40%), Gaps = 28/215 (13%)
Query: 423 AACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADW-SKNLESQFRKKIDT 481
+ E+F + +GT G VYK E+ K R D ++ + S ++I
Sbjct: 3 GSMENFQKV-EKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISL 58
Query: 482 LSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAM----RLRI 537
L ++NH N V L+ + +VFE+ + L + + + + ++
Sbjct: 59 LKELNHPNIVKLLDVIHTENKL--YLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQL 115
Query: 538 AMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF----------WNNTTAA 587
G+A+C H H+ + HR+L+ ++ + + A K++DF + +
Sbjct: 116 LQGLAFC--HSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVT 169
Query: 588 KTGSAAMELLETSAVDLESNVYSFGTILFEMITGR 622
A LL +++S G I EM+T R
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 77/163 (47%), Gaps = 25/163 (15%)
Query: 428 FSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNH 487
S+I+G G V++G ++ + V + + + ++ Q R+ + L K+NH
Sbjct: 13 LSDILGQ---GATANVFRGRHKKTGDLF--AIKVFNNISFLRPVDVQMRE-FEVLKKLNH 66
Query: 488 KNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLH-------IQEAEHLDWAMRLRIAMG 540
KN V L EE ++++ E+ P GSL+ L + E+E L + LR +G
Sbjct: 67 KNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFL---IVLRDVVG 123
Query: 541 MAYCLEHMHQLTPPIAHRNLQSSSI--YLTEDYAA--KISDFS 579
+ H+ + I HRN++ +I + ED + K++DF
Sbjct: 124 ---GMNHLRE--NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFG 161
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 94/228 (41%), Gaps = 32/228 (14%)
Query: 414 PKLKRSELEAAC----EDFSNI--IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADW 467
P R EL E + N+ +GS + G+V + +G+ +AV S R
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDT--KTGLRVAVKKLS---RPFQ 60
Query: 468 SKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAE 527
S + +++ L + H+N + L+ + FT E + L HL +
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLL------DVFTPARSLEEFNDVYLVTHLMGADLN 114
Query: 528 HLDWAMRLR------IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW 581
++ +L + + L+++H + I HR+L+ S++ + ED KI DF
Sbjct: 115 NIVKXQKLTDDHVQFLIYQILRGLKYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Query: 582 NNTTAAKTGSAAMELLETSAVDLE-------SNVYSFGTILFEMITGR 622
+T TG A + L +++S G I+ E++TGR
Sbjct: 173 RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 73/184 (39%), Gaps = 28/184 (15%)
Query: 507 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRI-AMGMAYCLEHMHQLTPPIAHRNLQSSSI 565
V EY+ G LF HL E + R R + LE++H + + +R+++ ++
Sbjct: 82 FVMEYANGGELFFHL---SRERVFTEERARFYGAEIVSALEYLH--SRDVVYRDIKLENL 136
Query: 566 YLTEDYAAKISDFSFWN---------NTTAAKTGSAAMELLETSAVDLESNVYSFGTILF 616
L +D KI+DF T A E+LE + + + G +++
Sbjct: 137 MLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMY 196
Query: 617 EMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPD 676
EM+ GR+ + N E L E + P KS +L++ D
Sbjct: 197 EMMCGRLPFY--NQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKK-----------D 243
Query: 677 PKQR 680
PKQR
Sbjct: 244 PKQR 247
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 79/188 (42%), Gaps = 28/188 (14%)
Query: 507 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLR-IAMGMAYCLEHMHQLTPPIAHRNLQSSSI 565
++ EY GS + L + A L+ I G L+++H + HR+++++++
Sbjct: 98 IIMEYLGGGSALDLLRAGPFDEFQIATMLKEILKG----LDYLH--SEKKIHRDIKAANV 151
Query: 566 YLTEDYAAKISDFSFWNNTTAAKTGS---------AAMELLETSAVDLESNVYSFGTILF 616
L+E K++DF T + A E+++ SA D +++++S G
Sbjct: 152 LLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAI 211
Query: 617 EMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPD 676
E+ G N + +L + +V KSF+E I C++ D
Sbjct: 212 ELAKGEPP----NSDMHPMRVLFLIPKNNPPTLVGDFTKSFKE--------FIDACLNKD 259
Query: 677 PKQRPSMR 684
P RP+ +
Sbjct: 260 PSFRPTAK 267
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 87/223 (39%), Gaps = 44/223 (19%)
Query: 423 AACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADW-SKNLESQFRKKIDT 481
+ E+F + +GT G VYK E+ K R D ++ + S ++I
Sbjct: 2 GSMENFQKV-EKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISL 57
Query: 482 LSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAM-- 539
L ++NH N V L+ + +VFE+ L + + +D + I +
Sbjct: 58 LKELNHPNIVKLLDVIHTENKL--YLVFEF---------LSMDLKDFMDASALTGIPLPL 106
Query: 540 ----------GMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF--------- 580
G+A+C H H+ + HR+L+ ++ + + A K++DF
Sbjct: 107 IKSYLFQLLQGLAFC--HSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 160
Query: 581 -WNNTTAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGR 622
+ + A LL +++S G I EM+T R
Sbjct: 161 TYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 94/228 (41%), Gaps = 32/228 (14%)
Query: 414 PKLKRSELEAAC----EDFSNI--IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADW 467
P R EL E + N+ +GS + G+V + +G+ +AV S R
Sbjct: 12 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDT--KTGLRVAVKKLS---RPFQ 66
Query: 468 SKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAE 527
S + +++ L + H+N + L+ + FT E + L HL +
Sbjct: 67 SIIHAKRTYRELRLLKHMKHENVIGLL------DVFTPARSLEEFNDVYLVTHLMGADLN 120
Query: 528 HLDWAMRLR------IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW 581
++ +L + + L+++H + I HR+L+ S++ + ED KI DF
Sbjct: 121 NIVKCQKLTDDHVQFLIYQILRGLKYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLA 178
Query: 582 NNTTAAKTGSAAMELLETSAVDLE-------SNVYSFGTILFEMITGR 622
+T TG A + L +++S G I+ E++TGR
Sbjct: 179 RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 73/184 (39%), Gaps = 28/184 (15%)
Query: 507 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRI-AMGMAYCLEHMHQLTPPIAHRNLQSSSI 565
V EY+ G LF HL E + R R + LE++H + + +R+++ ++
Sbjct: 82 FVMEYANGGELFFHL---SRERVFTEERARFYGAEIVSALEYLH--SRDVVYRDIKLENL 136
Query: 566 YLTEDYAAKISDFSFWN---------NTTAAKTGSAAMELLETSAVDLESNVYSFGTILF 616
L +D KI+DF T A E+LE + + + G +++
Sbjct: 137 MLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMY 196
Query: 617 EMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPD 676
EM+ GR+ + N E L E + P KS +L++ D
Sbjct: 197 EMMCGRLPFY--NQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKK-----------D 243
Query: 677 PKQR 680
PKQR
Sbjct: 244 PKQR 247
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 63/148 (42%), Gaps = 21/148 (14%)
Query: 557 HRNLQSSSIYLTEDYAAKISDFSF----WNNTTAAKTGSA-------AMELLETSAVDLE 605
HR+L + +I L+E+ KI DF + N + G A E + +
Sbjct: 222 HRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLPLKWMAPESIFDKIYSTK 281
Query: 606 SNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEEL 665
S+V+S+G +L+E+ + S E++ S +G + E E+
Sbjct: 282 SDVWSYGVLLWEIFSLGGSPYPGVQMDEDFCSRLREGMR----------MRAPEYSTPEI 331
Query: 666 LVVIKNCVHPDPKQRPSMRGIAAKLKEI 693
++ +C H DPK+RP + KL ++
Sbjct: 332 YQIMLDCWHRDPKERPRFAELVEKLGDL 359
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 73/184 (39%), Gaps = 28/184 (15%)
Query: 507 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRI-AMGMAYCLEHMHQLTPPIAHRNLQSSSI 565
V EY+ G LF HL E + R R + LE++H + + +R+++ ++
Sbjct: 85 FVMEYANGGELFFHL---SRERVFTEERARFYGAEIVSALEYLH--SRDVVYRDIKLENL 139
Query: 566 YLTEDYAAKISDFSFWN---------NTTAAKTGSAAMELLETSAVDLESNVYSFGTILF 616
L +D KI+DF T A E+LE + + + G +++
Sbjct: 140 MLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMY 199
Query: 617 EMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPD 676
EM+ GR+ + N E L E + P KS +L++ D
Sbjct: 200 EMMCGRLPFY--NQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKK-----------D 246
Query: 677 PKQR 680
PKQR
Sbjct: 247 PKQR 250
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 9/85 (10%)
Query: 545 LEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSAAMELLETSAVDL 604
L+++H + I HR+L+ S++ + ED KI DF +T TG A + L
Sbjct: 158 LKYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIML 215
Query: 605 E-------SNVYSFGTILFEMITGR 622
+++S G I+ E++TGR
Sbjct: 216 NWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 9/85 (10%)
Query: 545 LEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSAAMELLETSAVDL 604
L+++H + I HR+L+ S++ + ED KI DF +T TG A + L
Sbjct: 157 LKYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIML 214
Query: 605 E-------SNVYSFGTILFEMITGR 622
+++S G I+ E++TGR
Sbjct: 215 NWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 9/85 (10%)
Query: 545 LEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSAAMELLETSAVDL 604
L+++H + I HR+L+ S++ + ED KI DF +T TG A + L
Sbjct: 134 LKYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIML 191
Query: 605 E-------SNVYSFGTILFEMITGR 622
+++S G I+ E++TGR
Sbjct: 192 NWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 87/215 (40%), Gaps = 28/215 (13%)
Query: 423 AACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADW-SKNLESQFRKKIDT 481
+ E+F + +GT G VYK E+ K R D ++ + S ++I
Sbjct: 3 GSMENFQKV-EKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISL 58
Query: 482 LSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAM----RLRI 537
L ++NH N V L+ + +VFE+ + L + + + + ++
Sbjct: 59 LKELNHPNIVKLLDVIHTENKL--YLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQL 115
Query: 538 AMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF----------WNNTTAA 587
G+A+C H H+ + HR+L+ ++ + + A K++DF + +
Sbjct: 116 LQGLAFC--HSHR----VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVT 169
Query: 588 KTGSAAMELLETSAVDLESNVYSFGTILFEMITGR 622
A LL +++S G I EM+T R
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 9/85 (10%)
Query: 545 LEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSAAMELLETSAVDL 604
L+++H + I HR+L+ S++ + ED KI DF +T TG A + L
Sbjct: 150 LKYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIML 207
Query: 605 E-------SNVYSFGTILFEMITGR 622
+++S G I+ E++TGR
Sbjct: 208 NWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 9/85 (10%)
Query: 545 LEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSAAMELLETSAVDL 604
L+++H + I HR+L+ S++ + ED KI DF +T TG A + L
Sbjct: 148 LKYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIML 205
Query: 605 E-------SNVYSFGTILFEMITGR 622
+++S G I+ E++TGR
Sbjct: 206 NWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 9/85 (10%)
Query: 545 LEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSAAMELLETSAVDL 604
L+++H + I HR+L+ S++ + ED KI DF +T TG A + L
Sbjct: 138 LKYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIML 195
Query: 605 E-------SNVYSFGTILFEMITGR 622
+++S G I+ E++TGR
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 9/85 (10%)
Query: 545 LEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSAAMELLETSAVDL 604
L+++H + I HR+L+ S++ + ED KI DF +T TG A + L
Sbjct: 134 LKYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIML 191
Query: 605 E-------SNVYSFGTILFEMITGR 622
+++S G I+ E++TGR
Sbjct: 192 NWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 9/85 (10%)
Query: 545 LEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSAAMELLETSAVDL 604
L+++H + I HR+L+ S++ + ED KI DF +T TG A + L
Sbjct: 144 LKYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIML 201
Query: 605 E-------SNVYSFGTILFEMITGR 622
+++S G I+ E++TGR
Sbjct: 202 NWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 87/223 (39%), Gaps = 44/223 (19%)
Query: 423 AACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADW-SKNLESQFRKKIDT 481
+ E+F + +GT G VYK E+ K R D ++ + S ++I
Sbjct: 1 GSMENFQKV-EKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISL 56
Query: 482 LSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAM-- 539
L ++NH N V L+ + +VFE+ L + + +D + I +
Sbjct: 57 LKELNHPNIVKLLDVIHTENKL--YLVFEF---------LSMDLKKFMDASALTGIPLPL 105
Query: 540 ----------GMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF--------- 580
G+A+C H H+ + HR+L+ ++ + + A K++DF
Sbjct: 106 IKSYLFQLLQGLAFC--HSHR----VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVR 159
Query: 581 -WNNTTAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGR 622
+ + A LL +++S G I EM+T R
Sbjct: 160 TYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 78/197 (39%), Gaps = 29/197 (14%)
Query: 507 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRI-AMGMAYCLEHMHQLTPPIAHRNLQSSSI 565
V EY+ G LF HL + D R R + L+++H + +R+L+ ++
Sbjct: 225 FVMEYANGGELFFHLSRERVFSED---RARFYGAEIVSALDYLHS-EKNVVYRDLKLENL 280
Query: 566 YLTEDYAAKISDFSFWN---------NTTAAKTGSAAMELLETSAVDLESNVYSFGTILF 616
L +D KI+DF T A E+LE + + + G +++
Sbjct: 281 MLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMY 340
Query: 617 EMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPD 676
EM+ GR+ + N E L E + P KS +L++ D
Sbjct: 341 EMMCGRLPFY--NQDHEKLFELILMEEIRFPRTLGPEAKSLLSGLLKK-----------D 387
Query: 677 PKQRPSMRGIAAKLKEI 693
PKQR + G + KEI
Sbjct: 388 PKQR--LGGGSEDAKEI 402
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 77/164 (46%), Gaps = 27/164 (16%)
Query: 428 FSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNH 487
S+I+G G V++G ++ + V + + + ++ Q R+ + L K+NH
Sbjct: 13 LSDILGQ---GATANVFRGRHKKTGDLF--AIKVFNNISFLRPVDVQMRE-FEVLKKLNH 66
Query: 488 KNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLH-------IQEAEHLDWAMRLR-IAM 539
KN V L EE ++++ E+ P GSL+ L + E+E L + LR +
Sbjct: 67 KNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFL---IVLRDVVG 123
Query: 540 GMAYCLEHMHQLTPPIAHRNLQSSSI--YLTEDYAA--KISDFS 579
GM + E+ I HRN++ +I + ED + K++DF
Sbjct: 124 GMNHLREN------GIVHRNIKPGNIMRVIGEDGQSVYKLTDFG 161
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 78/197 (39%), Gaps = 29/197 (14%)
Query: 507 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRI-AMGMAYCLEHMHQLTPPIAHRNLQSSSI 565
V EY+ G LF HL + D R R + L+++H + +R+L+ ++
Sbjct: 228 FVMEYANGGELFFHLSRERVFSED---RARFYGAEIVSALDYLHS-EKNVVYRDLKLENL 283
Query: 566 YLTEDYAAKISDFSFWN---------NTTAAKTGSAAMELLETSAVDLESNVYSFGTILF 616
L +D KI+DF T A E+LE + + + G +++
Sbjct: 284 MLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMY 343
Query: 617 EMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPD 676
EM+ GR+ + N E L E + P KS +L++ D
Sbjct: 344 EMMCGRLPFY--NQDHEKLFELILMEEIRFPRTLGPEAKSLLSGLLKK-----------D 390
Query: 677 PKQRPSMRGIAAKLKEI 693
PKQR + G + KEI
Sbjct: 391 PKQR--LGGGSEDAKEI 405
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 75/184 (40%), Gaps = 28/184 (15%)
Query: 507 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRI-AMGMAYCLEHMHQLTPPIAHRNLQSSSI 565
V EY+ G LF HL E + R R + LE++H + + +R+++ ++
Sbjct: 82 FVMEYANGGELFFHL---SRERVFTEERARFYGAEIVSALEYLH--SRDVVYRDIKLENL 136
Query: 566 YLTEDYAAKISDFSFWNN------TTAAKTGSA---AMELLETSAVDLESNVYSFGTILF 616
L +D KI+DF T G+ A E+LE + + + G +++
Sbjct: 137 MLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMY 196
Query: 617 EMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPD 676
EM+ GR+ + N E L E + P KS +L++ D
Sbjct: 197 EMMCGRLPFY--NQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKK-----------D 243
Query: 677 PKQR 680
PKQR
Sbjct: 244 PKQR 247
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 81/198 (40%), Gaps = 31/198 (15%)
Query: 507 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIY 566
V EY+ G LF HL + D A R A + L+++H + +R+L+ ++
Sbjct: 85 FVMEYANGGELFFHLSRERVFSEDRA-RFYGA-EIVSALDYLHS-EKNVVYRDLKLENLM 141
Query: 567 LTEDYAAKISDFSFWNNTTAAKTGSA-----------AMELLETSAVDLESNVYSFGTIL 615
L +D KI+DF K G+ A E+LE + + + G ++
Sbjct: 142 LDKDGHIKITDFGLCKE--GIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVM 199
Query: 616 FEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHP 675
+EM+ GR+ + N E L E + P KS +L++
Sbjct: 200 YEMMCGRLPFY--NQDHEKLFELILMEEIRFPRTLGPEAKSLLSGLLKK----------- 246
Query: 676 DPKQRPSMRGIAAKLKEI 693
DPKQR + G + KEI
Sbjct: 247 DPKQR--LGGGSEDAKEI 262
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 75/184 (40%), Gaps = 28/184 (15%)
Query: 507 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRI-AMGMAYCLEHMHQLTPPIAHRNLQSSSI 565
V EY+ G LF HL E + R R + LE++H + + +R+++ ++
Sbjct: 82 FVMEYANGGELFFHL---SRERVFTEERARFYGAEIVSALEYLH--SRDVVYRDIKLENL 136
Query: 566 YLTEDYAAKISDFSFWNN------TTAAKTGSA---AMELLETSAVDLESNVYSFGTILF 616
L +D KI+DF T G+ A E+LE + + + G +++
Sbjct: 137 MLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMY 196
Query: 617 EMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPD 676
EM+ GR+ + N E L E + P KS +L++ D
Sbjct: 197 EMMCGRLPFY--NQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKK-----------D 243
Query: 677 PKQR 680
PKQR
Sbjct: 244 PKQR 247
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 94/228 (41%), Gaps = 32/228 (14%)
Query: 414 PKLKRSELEAAC----EDFSNI--IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADW 467
P R EL E + N+ +GS + G+V + +G+ +AV S R
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDT--KTGLRVAVKKLS---RPFQ 60
Query: 468 SKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAE 527
S + +++ L + H+N + L+ + FT E + L HL +
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLL------DVFTPARSLEEFNDVYLVTHLMGADLN 114
Query: 528 HLDWAMRLR------IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW 581
++ +L + + L+++H + I HR+L+ S++ + ED KI D+
Sbjct: 115 NIVKCQKLTDDHVQFLIYQILRGLKYIH--SADIIHRDLKPSNLAVNEDCELKILDYGLA 172
Query: 582 NNTTAAKTGSAAMELLETSAVDLE-------SNVYSFGTILFEMITGR 622
+T TG A + L +++S G I+ E++TGR
Sbjct: 173 RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 81/198 (40%), Gaps = 31/198 (15%)
Query: 507 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIY 566
V EY+ G LF HL + D A R A + L+++H + +R+L+ ++
Sbjct: 86 FVMEYANGGELFFHLSRERVFSEDRA-RFYGA-EIVSALDYLHS-EKNVVYRDLKLENLM 142
Query: 567 LTEDYAAKISDFSFWNNTTAAKTGSA-----------AMELLETSAVDLESNVYSFGTIL 615
L +D KI+DF K G+ A E+LE + + + G ++
Sbjct: 143 LDKDGHIKITDFGLCKE--GIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVM 200
Query: 616 FEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHP 675
+EM+ GR+ + N E L E + P KS +L++
Sbjct: 201 YEMMCGRLPFY--NQDHEKLFELILMEEIRFPRTLGPEAKSLLSGLLKK----------- 247
Query: 676 DPKQRPSMRGIAAKLKEI 693
DPKQR + G + KEI
Sbjct: 248 DPKQR--LGGGSEDAKEI 263
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 76/188 (40%), Gaps = 28/188 (14%)
Query: 507 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLR-IAMGMAYCLEHMHQLTPPIAHRNLQSSSI 565
++ EY GS + L E A LR I G+ Y HR+++++++
Sbjct: 94 IIMEYLGGGSALDLLKPGPLEETYIATILREILKGLDYLHSERK------IHRDIKAANV 147
Query: 566 YLTEDYAAKISDFSFWNNTTAAKTGS---------AAMELLETSAVDLESNVYSFGTILF 616
L+E K++DF T + A E+++ SA D +++++S G
Sbjct: 148 LLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDFKADIWSLGITAI 207
Query: 617 EMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPD 676
E+ G N L +L + PTL+ +E ++ C++ D
Sbjct: 208 ELAKGEPP----NSDLHPMRVLFL-----IPKNSPPTLEGQHSKPFKEF---VEACLNKD 255
Query: 677 PKQRPSMR 684
P+ RP+ +
Sbjct: 256 PRFRPTAK 263
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 9/85 (10%)
Query: 545 LEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSAAMELLETSAVDL 604
L+++H + I HR+L+ S++ + ED KI DF +T TG A + L
Sbjct: 138 LKYIH--SADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGYVATRWYRAPEIML 195
Query: 605 E-------SNVYSFGTILFEMITGR 622
+++S G I+ E++TGR
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 81/198 (40%), Gaps = 31/198 (15%)
Query: 507 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIY 566
V EY+ G LF HL + D A R A + L+++H + +R+L+ ++
Sbjct: 87 FVMEYANGGELFFHLSRERVFSEDRA-RFYGA-EIVSALDYLHS-EKNVVYRDLKLENLM 143
Query: 567 LTEDYAAKISDFSFWNNTTAAKTGSA-----------AMELLETSAVDLESNVYSFGTIL 615
L +D KI+DF K G+ A E+LE + + + G ++
Sbjct: 144 LDKDGHIKITDFGLCKE--GIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVM 201
Query: 616 FEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHP 675
+EM+ GR+ + N E L E + P KS +L++
Sbjct: 202 YEMMCGRLPFY--NQDHEKLFELILMEEIRFPRTLGPEAKSLLSGLLKK----------- 248
Query: 676 DPKQRPSMRGIAAKLKEI 693
DPKQR + G + KEI
Sbjct: 249 DPKQR--LGGGSEDAKEI 264
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 75/184 (40%), Gaps = 28/184 (15%)
Query: 507 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRI-AMGMAYCLEHMHQLTPPIAHRNLQSSSI 565
V EY+ G LF HL E + R R + LE++H + + +R+++ ++
Sbjct: 82 FVMEYANGGELFFHL---SRERVFTEERARFYGAEIVSALEYLH--SRDVVYRDIKLENL 136
Query: 566 YLTEDYAAKISDFSFWNN------TTAAKTGSA---AMELLETSAVDLESNVYSFGTILF 616
L +D KI+DF T G+ A E+LE + + + G +++
Sbjct: 137 MLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMY 196
Query: 617 EMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPD 676
EM+ GR+ + N E L E + P KS +L++ D
Sbjct: 197 EMMCGRLPFY--NQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKK-----------D 243
Query: 677 PKQR 680
PKQR
Sbjct: 244 PKQR 247
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 82/210 (39%), Gaps = 44/210 (20%)
Query: 504 TRMMVFEYSPNGSLFEHLH---IQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNL 560
T + EY N +L++ +H + + W + +I ++Y +H + I HRNL
Sbjct: 89 TLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALSY----IH--SQGIIHRNL 142
Query: 561 QSSSIYLTEDYAAKISDFSFWNN----------------------TTAAKTGS-AAMELL 597
+ +I++ E KI DF N T+A T A E+L
Sbjct: 143 KPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAXYVATEVL 202
Query: 598 E-TSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKS 656
+ T + + + YS G I FE I Y G E + + L+ +
Sbjct: 203 DGTGHYNEKIDXYSLGIIFFEXI-----YPFSTG------XERVNILKKLRSVSIEFPPD 251
Query: 657 FQENVLEELLVVIKNCVHPDPKQRPSMRGI 686
F +N + +I+ + DP +RP R +
Sbjct: 252 FDDNKXKVEKKIIRLLIDHDPNKRPGARTL 281
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 75/184 (40%), Gaps = 28/184 (15%)
Query: 507 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRI-AMGMAYCLEHMHQLTPPIAHRNLQSSSI 565
V EY+ G LF HL E + R R + LE++H + + +R+++ ++
Sbjct: 87 FVMEYANGGELFFHL---SRERVFTEERARFYGAEIVSALEYLH--SRDVVYRDIKLENL 141
Query: 566 YLTEDYAAKISDFSFWNN------TTAAKTGSA---AMELLETSAVDLESNVYSFGTILF 616
L +D KI+DF T G+ A E+LE + + + G +++
Sbjct: 142 MLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMY 201
Query: 617 EMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPD 676
EM+ GR+ + N E L E + P KS +L++ D
Sbjct: 202 EMMCGRLPFY--NQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKK-----------D 248
Query: 677 PKQR 680
PKQR
Sbjct: 249 PKQR 252
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 47/226 (20%), Positives = 98/226 (43%), Gaps = 23/226 (10%)
Query: 411 TGVPKLKRSELEAACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKN 470
+G+P ++ L+A E+ + G+ G V+KG + + + V + +
Sbjct: 8 SGLPGMQN--LKADPEELFTKLEKIGKGSFGEVFKG-IDNRTQKVVAIKIIDLEEAEDEI 64
Query: 471 LESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRM-MVFEYSPNGSLFEHLHIQEAEHL 529
+ Q ++I LS+ + G +D T++ ++ EY GS + L E L
Sbjct: 65 EDIQ--QEITVLSQCDSPYVTKYYGSYLKD---TKLWIIMEYLGGGSALDLL---EPGPL 116
Query: 530 DWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKT 589
D I + L+++H + HR+++++++ L+E K++DF T +
Sbjct: 117 DETQIATILREILKGLDYLH--SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI 174
Query: 590 GS---------AAMELLETSAVDLESNVYSFGTILFEMITGRISYS 626
A E+++ SA D +++++S G E+ G +S
Sbjct: 175 KRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHS 220
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 86/205 (41%), Gaps = 27/205 (13%)
Query: 432 IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFV 491
+ +GT TVYKG S + V + R + + +++ L + H N V
Sbjct: 7 LDKLGEGTYATVYKGK-SKLTDNLVALKEI--RLEHEEGAPCTAIREVSLLKDLKHANIV 63
Query: 492 NLIGYCEEDEPFTRMMVFEYSPNGSLFEHL----HIQEAEHLDWAMRLRIAMGMAYCLEH 547
L ++ T +VFEY + L ++L +I ++ + ++ G+AYC H
Sbjct: 64 TLHDIIHTEKSLT--LVFEYL-DKDLKQYLDDCGNIINMHNVKLFL-FQLLRGLAYC--H 117
Query: 548 MHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF----------WNNTTAAKTGSAAMELL 597
+ + HR+L+ ++ + E K++DF ++N LL
Sbjct: 118 RQK----VLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILL 173
Query: 598 ETSAVDLESNVYSFGTILFEMITGR 622
++ + +++ G I +EM TGR
Sbjct: 174 GSTDYSTQIDMWGVGCIFYEMATGR 198
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 85/215 (39%), Gaps = 40/215 (18%)
Query: 426 EDFSNIIGSFSDGTVGTVYKG-TLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSK 484
EDF IIG G G VYK + V A KS + LE + +ID L+
Sbjct: 11 EDFWEIIGEL--GDFGKVYKAQNKETSVLAAAKVIDTKSE----EELED-YMVEIDILAS 63
Query: 485 VNHKNFVNLIG--YCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMA 542
+H N V L+ Y E + ++ E+ G++ +A L+ L +
Sbjct: 64 CDHPNIVKLLDAFYYENN----LWILIEFCAGGAV-------DAVMLELERPLTESQIQV 112
Query: 543 YCLEHMHQLT----PPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTG-------- 590
C + + L I HR+L++ +I T D K++DF T
Sbjct: 113 VCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGT 172
Query: 591 ----SAAMELLETSA---VDLESNVYSFGTILFEM 618
+ + + ETS D +++V+S G L EM
Sbjct: 173 PYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 207
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 93/228 (40%), Gaps = 32/228 (14%)
Query: 414 PKLKRSELEAAC----EDFSNI--IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADW 467
P R EL E + N+ +GS + G+V + +G+ +AV S R
Sbjct: 29 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDT--KTGLRVAVKKLS---RPFQ 83
Query: 468 SKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAE 527
S + +++ L + H+N + L+ + FT E + L HL +
Sbjct: 84 SIIHAKRTYRELRLLKHMKHENVIGLL------DVFTPARSLEEFNDVYLVTHLMGADLN 137
Query: 528 HLDWAMRLR------IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW 581
++ +L + + L+++H + I HR+L+ S++ + ED KI DF
Sbjct: 138 NIVKCQKLTDDHVQFLIYQILRGLKYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLA 195
Query: 582 NNTTAAKTGSAAMELLETSAVDLE-------SNVYSFGTILFEMITGR 622
+T G A + L +++S G I+ E++TGR
Sbjct: 196 RHTDDEMXGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 128/308 (41%), Gaps = 37/308 (12%)
Query: 407 KAFVTGVPKLKRSELEAACEDFSNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRA 465
+AF+T K K EL+ +DF I G G V+K + SG+ +A ++ +
Sbjct: 10 EAFLT--QKQKVGELKD--DDFEKI-SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKP 64
Query: 466 DWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHI-- 523
+ +Q +++ L + N V G D + M E+ GSL + L
Sbjct: 65 ----AIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM--EHMDGGSLDQVLKKAG 118
Query: 524 QEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF--- 580
+ E + + + + G+ Y L H+ I HR+++ S+I + K+ DF
Sbjct: 119 RIPEQILGKVSIAVIKGLTY-LREKHK----IMHRDVKPSNILVNSRGEIKLCDFGVSGQ 173
Query: 581 ----WNNTTAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWA 636
N+ + E L+ + ++S+++S G L EM GR +GS+ +
Sbjct: 174 LIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFE 233
Query: 637 -SEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRG--IAAKLKEI 693
+Y+ E P P L S ++ E + C+ +P +R ++ + A +K
Sbjct: 234 LLDYIVNEPP------PKLPSGVFSL--EFQDFVNKCLIKNPAERADLKQLMVHAFIKRS 285
Query: 694 TAMEPDGA 701
A E D A
Sbjct: 286 DAEEVDFA 293
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 34/165 (20%), Positives = 76/165 (46%), Gaps = 24/165 (14%)
Query: 477 KKIDTLSKVNHKNFVNLIGYCE--EDEPFTR------------MMVFEYSPNGSLFEHLH 522
+++ L+K++H N V+ G + + +P T + E+ G+L + +
Sbjct: 53 REVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIE 112
Query: 523 IQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF---- 578
+ E LD + L + + ++++H + + +R+L+ S+I+L + KI DF
Sbjct: 113 KRRGEKLDKVLALELFEQITKGVDYIH--SKKLINRDLKPSNIFLVDTKQVKIGDFGLVT 170
Query: 579 SFWNNTTAAKTGSA----AMELLETSAVDLESNVYSFGTILFEMI 619
S N+ ++ + E + + E ++Y+ G IL E++
Sbjct: 171 SLKNDGKRXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 62/145 (42%), Gaps = 21/145 (14%)
Query: 557 HRNLQSSSIYLTEDYAAKISDFSF----WNNTTAAKTGSA-------AMELLETSAVDLE 605
HR+L + +I L+E KI DF + + + G A A E + ++
Sbjct: 214 HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQ 273
Query: 606 SNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEEL 665
S+V+SFG +L+E+ + + S G + E+ + + + T + E+
Sbjct: 274 SDVWSFGVLLWEIFS--LGASPYPGVKID--------EEFCRRLKEGTRMRAPDYTTPEM 323
Query: 666 LVVIKNCVHPDPKQRPSMRGIAAKL 690
+ +C H +P QRP+ + L
Sbjct: 324 YQTMLDCWHGEPSQRPTFSELVEHL 348
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 62/145 (42%), Gaps = 21/145 (14%)
Query: 557 HRNLQSSSIYLTEDYAAKISDFSF----WNNTTAAKTGSA-------AMELLETSAVDLE 605
HR+L + +I L+E KI DF + + + G A A E + ++
Sbjct: 216 HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQ 275
Query: 606 SNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEEL 665
S+V+SFG +L+E+ + + S G + E+ + + + T + E+
Sbjct: 276 SDVWSFGVLLWEIFS--LGASPYPGVKID--------EEFCRRLKEGTRMRAPDYTTPEM 325
Query: 666 LVVIKNCVHPDPKQRPSMRGIAAKL 690
+ +C H +P QRP+ + L
Sbjct: 326 YQTMLDCWHGEPSQRPTFSELVEHL 350
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 56/121 (46%), Gaps = 10/121 (8%)
Query: 507 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIY 566
MV EY+P G +F HL + + R A + E++H L + +R+L+ ++
Sbjct: 118 MVMEYAPGGEMFSHLR-RIGRFXEPHARFYAAQ-IVLTFEYLHSLD--LIYRDLKPENLM 173
Query: 567 LTEDYAAKISDFSFWNNT---TAAKTGSA---AMELLETSAVDLESNVYSFGTILFEMIT 620
+ + K++DF F T G+ A E++ + + + ++ G +++EM
Sbjct: 174 IDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 621 G 621
G
Sbjct: 234 G 234
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 82/188 (43%), Gaps = 25/188 (13%)
Query: 506 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSI 565
V EY G L H+ Q + A + +A L ++H+ I +R+L+ ++
Sbjct: 129 FFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA--LNYLHERG--IIYRDLKLDNV 184
Query: 566 YLTEDYAAKISDFSFWN------NTTAAKTGSA---AMELLETSAVDLESNVYSFGTILF 616
L + K++D+ +TT+ G+ A E+L + ++ G ++F
Sbjct: 185 LLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMF 244
Query: 617 EMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLV----VIKNC 672
EM+ GR + I GS +N +Q +D + + Q + L V V+K+
Sbjct: 245 EMMAGRSPFDI-VGSSDN-------PDQNTEDYLFQVILEKQIRIPRSLSVKAASVLKSF 296
Query: 673 VHPDPKQR 680
++ DPK+R
Sbjct: 297 LNKDPKER 304
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 82/188 (43%), Gaps = 25/188 (13%)
Query: 506 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSI 565
V EY G L H+ Q + A + +A L ++H+ I +R+L+ ++
Sbjct: 86 FFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA--LNYLHERG--IIYRDLKLDNV 141
Query: 566 YLTEDYAAKISDFSFWN------NTTAAKTGSA---AMELLETSAVDLESNVYSFGTILF 616
L + K++D+ +TT+ G+ A E+L + ++ G ++F
Sbjct: 142 LLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMF 201
Query: 617 EMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLV----VIKNC 672
EM+ GR + I GS +N +Q +D + + Q + L V V+K+
Sbjct: 202 EMMAGRSPFDIV-GSSDN-------PDQNTEDYLFQVILEKQIRIPRSLSVKAASVLKSF 253
Query: 673 VHPDPKQR 680
++ DPK+R
Sbjct: 254 LNKDPKER 261
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 62/145 (42%), Gaps = 21/145 (14%)
Query: 557 HRNLQSSSIYLTEDYAAKISDFSF----WNNTTAAKTGSA-------AMELLETSAVDLE 605
HR+L + +I L+E KI DF + + + G A A E + ++
Sbjct: 221 HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQ 280
Query: 606 SNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEEL 665
S+V+SFG +L+E+ + + S G + E+ + + + T + E+
Sbjct: 281 SDVWSFGVLLWEIFS--LGASPYPGVKID--------EEFCRRLKEGTRMRAPDYTTPEM 330
Query: 666 LVVIKNCVHPDPKQRPSMRGIAAKL 690
+ +C H +P QRP+ + L
Sbjct: 331 YQTMLDCWHGEPSQRPTFSELVEHL 355
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 62/145 (42%), Gaps = 21/145 (14%)
Query: 557 HRNLQSSSIYLTEDYAAKISDFSF----WNNTTAAKTGSA-------AMELLETSAVDLE 605
HR+L + +I L+E KI DF + + + G A A E + ++
Sbjct: 223 HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQ 282
Query: 606 SNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEEL 665
S+V+SFG +L+E+ + + S G + E+ + + + T + E+
Sbjct: 283 SDVWSFGVLLWEIFS--LGASPYPGVKID--------EEFCRRLKEGTRMRAPDYTTPEM 332
Query: 666 LVVIKNCVHPDPKQRPSMRGIAAKL 690
+ +C H +P QRP+ + L
Sbjct: 333 YQTMLDCWHGEPSQRPTFSELVEHL 357
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
Query: 545 LEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSAAMELLETSAVDL 604
L+++H + I HR+L+ S++ + ED KI DF +T G A + L
Sbjct: 158 LKYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGXVATRWYRAPEIML 215
Query: 605 E-------SNVYSFGTILFEMITGR 622
+++S G I+ E++TGR
Sbjct: 216 NWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 78/195 (40%), Gaps = 36/195 (18%)
Query: 450 SGVEIAVTST----SVKSRADWSKNLESQFRKKIDTLSKVNHKNFVN-------LIGYCE 498
+G ++A+ S K+R W LE Q KK+ NH N V+ L
Sbjct: 38 TGEQVAIKQCRQELSPKNRERWC--LEIQIMKKL------NHPNVVSAREVPDGLQKLAP 89
Query: 499 EDEPFTRMMVFEYSPNGSLFEHL-HIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAH 557
D P ++ EY G L ++L + L + ++ L ++H+ I H
Sbjct: 90 NDLP---LLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENR--IIH 144
Query: 558 RNLQSSSIYLT---EDYAAKISDFSFWNNTTAAKTGSA--------AMELLETSAVDLES 606
R+L+ +I L + KI D + + + A ELLE +
Sbjct: 145 RDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTV 204
Query: 607 NVYSFGTILFEMITG 621
+ +SFGT+ FE ITG
Sbjct: 205 DYWSFGTLAFECITG 219
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 56/121 (46%), Gaps = 10/121 (8%)
Query: 507 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIY 566
MV EY+P G +F HL + + R A + E++H L + +R+L+ ++
Sbjct: 119 MVMEYAPGGEMFSHLR-RIGRFXEPHARFYAAQ-IVLTFEYLHSLD--LIYRDLKPENLM 174
Query: 567 LTEDYAAKISDFSFWNNT---TAAKTGSA---AMELLETSAVDLESNVYSFGTILFEMIT 620
+ + K++DF F T G+ A E++ + + + ++ G +++EM
Sbjct: 175 IDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 234
Query: 621 G 621
G
Sbjct: 235 G 235
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 78/195 (40%), Gaps = 36/195 (18%)
Query: 450 SGVEIAVTST----SVKSRADWSKNLESQFRKKIDTLSKVNHKNFVN-------LIGYCE 498
+G ++A+ S K+R W LE Q KK+ NH N V+ L
Sbjct: 39 TGEQVAIKQCRQELSPKNRERWC--LEIQIMKKL------NHPNVVSAREVPDGLQKLAP 90
Query: 499 EDEPFTRMMVFEYSPNGSLFEHL-HIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAH 557
D P ++ EY G L ++L + L + ++ L ++H+ I H
Sbjct: 91 NDLP---LLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENR--IIH 145
Query: 558 RNLQSSSIYLT---EDYAAKISDFSFWNNTTAAKTGSA--------AMELLETSAVDLES 606
R+L+ +I L + KI D + + + A ELLE +
Sbjct: 146 RDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTV 205
Query: 607 NVYSFGTILFEMITG 621
+ +SFGT+ FE ITG
Sbjct: 206 DYWSFGTLAFECITG 220
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 42/209 (20%), Positives = 80/209 (38%), Gaps = 41/209 (19%)
Query: 434 SFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNL 493
+GT G VYK + G A+ ++ + + S ++I L ++ H N V L
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKE---DEGIPSTTIREISILKELKHSNIVKL 65
Query: 494 IGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDW-----------AMRLRIAMGMA 542
+ R+++ +FEHL + LD + L++ G+A
Sbjct: 66 YDVIHTKK---RLVL--------VFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIA 114
Query: 543 YCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF----------WNNTTAAKTGSA 592
YC + + HR+L+ ++ + + KI+DF + + A
Sbjct: 115 YCHDRR------VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRA 168
Query: 593 AMELLETSAVDLESNVYSFGTILFEMITG 621
L+ + +++S G I EM+ G
Sbjct: 169 PDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 86/222 (38%), Gaps = 31/222 (13%)
Query: 424 ACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLS 483
A DF + G VY+ G + +K D + R +I L
Sbjct: 50 ALSDFFEVESELGRGATSIVYRCK-QKGTQKPYALKVLKKTVD-----KKIVRTEIGVLL 103
Query: 484 KVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHL----HIQEAEHLDWAMRLRIAM 539
+++H N + L E P +V E G LF+ + + E + D A++ +I
Sbjct: 104 RLSHPNIIKLKEIFET--PTEISLVLELVTGGELFDRIVEKGYYSERDAAD-AVK-QILE 159
Query: 540 GMAYCLEHMHQLTPPIAHRNLQSSSI-YLTE--DYAAKISDFSFWN--------NTTAAK 588
+AY E+ I HR+L+ ++ Y T D KI+DF T
Sbjct: 160 AVAYLHEN------GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGT 213
Query: 589 TGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENG 630
G A E+L A E +++S G I + ++ G + E G
Sbjct: 214 PGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERG 255
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 27/121 (22%), Positives = 54/121 (44%), Gaps = 10/121 (8%)
Query: 507 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIY 566
MV EY+P G +F HL + A + E++H L + +R+L+ ++
Sbjct: 119 MVLEYAPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLL 174
Query: 567 LTEDYAAKISDFSFWNNT---TAAKTGSA---AMELLETSAVDLESNVYSFGTILFEMIT 620
+ + K++DF F T G+ A E++ + + + ++ G +++EM
Sbjct: 175 IDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 234
Query: 621 G 621
G
Sbjct: 235 G 235
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 82/188 (43%), Gaps = 25/188 (13%)
Query: 506 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSI 565
V EY G L H+ Q + A + +A L ++H+ I +R+L+ ++
Sbjct: 82 FFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA--LNYLHERG--IIYRDLKLDNV 137
Query: 566 YLTEDYAAKISDFSFWN------NTTAAKTGSA---AMELLETSAVDLESNVYSFGTILF 616
L + K++D+ +TT+ G+ A E+L + ++ G ++F
Sbjct: 138 LLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMF 197
Query: 617 EMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLV----VIKNC 672
EM+ GR + I GS +N +Q +D + + Q + L V V+K+
Sbjct: 198 EMMAGRSPFDIV-GSSDN-------PDQNTEDYLFQVILEKQIRIPRSLSVKAASVLKSF 249
Query: 673 VHPDPKQR 680
++ DPK+R
Sbjct: 250 LNKDPKER 257
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 42/209 (20%), Positives = 80/209 (38%), Gaps = 41/209 (19%)
Query: 434 SFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNL 493
+GT G VYK + G A+ ++ + + S ++I L ++ H N V L
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKE---DEGIPSTTIREISILKELKHSNIVKL 65
Query: 494 IGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDW-----------AMRLRIAMGMA 542
+ R+++ +FEHL + LD + L++ G+A
Sbjct: 66 YDVIHTKK---RLVL--------VFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIA 114
Query: 543 YCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF----------WNNTTAAKTGSA 592
YC + + HR+L+ ++ + + KI+DF + + A
Sbjct: 115 YCHDRR------VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRA 168
Query: 593 AMELLETSAVDLESNVYSFGTILFEMITG 621
L+ + +++S G I EM+ G
Sbjct: 169 PDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 36/175 (20%), Positives = 79/175 (45%), Gaps = 20/175 (11%)
Query: 425 CEDFSNI--IGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDT 481
C++ S + GT G V+K +G ++A+ +++ + ++I
Sbjct: 14 CDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKE---GFPITALREIKI 70
Query: 482 LSKVNHKNFVNLIGYCE-EDEPFTR-----MMVFEYSPN--GSLFEHLHIQEAEHLDWAM 533
L + H+N VNLI C + P+ R +VF++ + L ++ ++ +
Sbjct: 71 LQLLKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVK----FTLSE 126
Query: 534 RLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAK 588
R+ + L ++H+ I HR+++++++ +T D K++DF + AK
Sbjct: 127 IKRVMQMLLNGLYYIHR--NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAK 179
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 37.4 bits (85), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 36/175 (20%), Positives = 79/175 (45%), Gaps = 20/175 (11%)
Query: 425 CEDFSNI--IGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDT 481
C++ S + GT G V+K +G ++A+ +++ + ++I
Sbjct: 13 CDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKE---GFPITALREIKI 69
Query: 482 LSKVNHKNFVNLIGYCE-EDEPFTR-----MMVFEYSPN--GSLFEHLHIQEAEHLDWAM 533
L + H+N VNLI C + P+ R +VF++ + L ++ ++ +
Sbjct: 70 LQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK----FTLSE 125
Query: 534 RLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAK 588
R+ + L ++H+ I HR+++++++ +T D K++DF + AK
Sbjct: 126 IKRVMQMLLNGLYYIHR--NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAK 178
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 37.4 bits (85), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 36/175 (20%), Positives = 79/175 (45%), Gaps = 20/175 (11%)
Query: 425 CEDFSNI--IGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDT 481
C++ S + GT G V+K +G ++A+ +++ + ++I
Sbjct: 14 CDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKE---GFPITALREIKI 70
Query: 482 LSKVNHKNFVNLIGYCE-EDEPFTR-----MMVFEYSPN--GSLFEHLHIQEAEHLDWAM 533
L + H+N VNLI C + P+ R +VF++ + L ++ ++ +
Sbjct: 71 LQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK----FTLSE 126
Query: 534 RLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAK 588
R+ + L ++H+ I HR+++++++ +T D K++DF + AK
Sbjct: 127 IKRVMQMLLNGLYYIHR--NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAK 179
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 42/209 (20%), Positives = 80/209 (38%), Gaps = 41/209 (19%)
Query: 434 SFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNL 493
+GT G VYK + G A+ ++ + + S ++I L ++ H N V L
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKE---DEGIPSTTIREISILKELKHSNIVKL 65
Query: 494 IGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDW-----------AMRLRIAMGMA 542
+ R+++ +FEHL + LD + L++ G+A
Sbjct: 66 YDVIHTKK---RLVL--------VFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIA 114
Query: 543 YCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF----------WNNTTAAKTGSA 592
YC + + HR+L+ ++ + + KI+DF + + A
Sbjct: 115 YCHDRR------VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRA 168
Query: 593 AMELLETSAVDLESNVYSFGTILFEMITG 621
L+ + +++S G I EM+ G
Sbjct: 169 PDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/121 (20%), Positives = 51/121 (42%), Gaps = 10/121 (8%)
Query: 507 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIY 566
MV EY+P G +F HL + A + E++H L + +R+L+ ++
Sbjct: 118 MVMEYAPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLM 173
Query: 567 LTEDYAAKISDFSFWNNTTA------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT 620
+ + K++DF F A E++ + + + ++ G +++EM
Sbjct: 174 IDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 621 G 621
G
Sbjct: 234 G 234
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 27/121 (22%), Positives = 54/121 (44%), Gaps = 10/121 (8%)
Query: 507 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIY 566
MV EY+P G +F HL + A + E++H L + +R+L+ ++
Sbjct: 119 MVMEYAPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLM 174
Query: 567 LTEDYAAKISDFSFWNNT---TAAKTGSA---AMELLETSAVDLESNVYSFGTILFEMIT 620
+ + K++DF F T G+ A E++ + + + ++ G +++EM
Sbjct: 175 IDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 234
Query: 621 G 621
G
Sbjct: 235 G 235
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 27/121 (22%), Positives = 54/121 (44%), Gaps = 10/121 (8%)
Query: 507 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIY 566
MV EY+P G +F HL + A + E++H L + +R+L+ ++
Sbjct: 119 MVMEYAPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLM 174
Query: 567 LTEDYAAKISDFSFWNNT---TAAKTGSA---AMELLETSAVDLESNVYSFGTILFEMIT 620
+ + K++DF F T G+ A E++ + + + ++ G +++EM
Sbjct: 175 IDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 234
Query: 621 G 621
G
Sbjct: 235 G 235
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 25/121 (20%), Positives = 51/121 (42%), Gaps = 10/121 (8%)
Query: 507 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIY 566
MV EY+P G +F HL + A + E++H L + +R+L+ ++
Sbjct: 119 MVMEYAPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLM 174
Query: 567 LTEDYAAKISDFSFWNNTTA------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT 620
+ + K++DF F A E++ + + + ++ G +++EM
Sbjct: 175 IDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 234
Query: 621 G 621
G
Sbjct: 235 G 235
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 36/175 (20%), Positives = 79/175 (45%), Gaps = 20/175 (11%)
Query: 425 CEDFSNI--IGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDT 481
C++ S + GT G V+K +G ++A+ +++ + ++I
Sbjct: 14 CDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKE---GFPITALREIKI 70
Query: 482 LSKVNHKNFVNLIGYCE-EDEPFTR-----MMVFEYSPN--GSLFEHLHIQEAEHLDWAM 533
L + H+N VNLI C + P+ R +VF++ + L ++ ++ +
Sbjct: 71 LQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK----FTLSE 126
Query: 534 RLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAK 588
R+ + L ++H+ I HR+++++++ +T D K++DF + AK
Sbjct: 127 IKRVMQMLLNGLYYIHR--NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAK 179
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 93/228 (40%), Gaps = 32/228 (14%)
Query: 414 PKLKRSELEAAC----EDFSNI--IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADW 467
P R EL E + N+ +GS + G+V + +G+ +AV S R
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDT--KTGLRVAVKKLS---RPFQ 60
Query: 468 SKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAE 527
S + +++ L + H+N + L+ + FT E + L HL +
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLL------DVFTPARSLEEFNDVYLVTHLMGADLN 114
Query: 528 HLDWAMRLR------IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW 581
++ +L + + L+++H + I HR+L+ S++ + ED KI F
Sbjct: 115 NIVKCQKLTDDHVQFLIYQILRGLKYIH--SADIIHRDLKPSNLAVNEDCELKILGFGLA 172
Query: 582 NNTTAAKTGSAAMELLETSAVDLE-------SNVYSFGTILFEMITGR 622
+T TG A + L +++S G I+ E++TGR
Sbjct: 173 RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 37.0 bits (84), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
Query: 545 LEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSAAMELLETSAVDL 604
L+++H + I HR+L+ S++ + ED KI DF +T G A + L
Sbjct: 134 LKYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWYRAPEIML 191
Query: 605 E-------SNVYSFGTILFEMITGR 622
+++S G I+ E++TGR
Sbjct: 192 NWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 37.0 bits (84), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
Query: 545 LEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSAAMELLETSAVDL 604
L+++H + I HR+L+ S++ + ED KI DF +T G A + L
Sbjct: 138 LKYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWYRAPEIML 195
Query: 605 E-------SNVYSFGTILFEMITGR 622
+++S G I+ E++TGR
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 36.6 bits (83), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
Query: 545 LEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSAAMELLETSAVDL 604
L+++H + I HR+L+ S++ + ED KI DF +T G A + L
Sbjct: 138 LKYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWYRAPEIML 195
Query: 605 E-------SNVYSFGTILFEMITGR 622
+++S G I+ E++TGR
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 36.6 bits (83), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 82/188 (43%), Gaps = 25/188 (13%)
Query: 506 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSI 565
V EY G L H+ Q + A + +A L ++H+ I +R+L+ ++
Sbjct: 97 FFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA--LNYLHERG--IIYRDLKLDNV 152
Query: 566 YLTEDYAAKISDFSFWN------NTTAAKTGSA---AMELLETSAVDLESNVYSFGTILF 616
L + K++D+ +TT+ G+ A E+L + ++ G ++F
Sbjct: 153 LLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMF 212
Query: 617 EMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLV----VIKNC 672
EM+ GR + I GS +N +Q +D + + Q + + V V+K+
Sbjct: 213 EMMAGRSPFDI-VGSSDN-------PDQNTEDYLFQVILEKQIRIPRSMSVKAASVLKSF 264
Query: 673 VHPDPKQR 680
++ DPK+R
Sbjct: 265 LNKDPKER 272
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 9/89 (10%)
Query: 541 MAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSAAMELLETS 600
M L+++H + + HR+L+ ++ + ED KI DF + A TG
Sbjct: 153 MLKGLKYIH--SAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRWYRAP 210
Query: 601 AVDLE-------SNVYSFGTILFEMITGR 622
V L +++S G I+ EM+TG+
Sbjct: 211 EVILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 49/125 (39%), Gaps = 2/125 (1%)
Query: 120 VVILNLRDLCLGGMLAPELGQ--LSELKSIILRNNSFFGTIPXXXXXXXXXXXXXXXFNN 177
++ L+L G + P L Q + L+ + L+NN F G IP FN
Sbjct: 367 LLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNY 426
Query: 178 FSGPFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLTNAASRASCNS 237
SG PS G+ L L L N G I EL +K + + +D + LT N
Sbjct: 427 LSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNC 486
Query: 238 GLFTW 242
W
Sbjct: 487 TNLNW 491
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 41/92 (44%), Gaps = 2/92 (2%)
Query: 115 CSDGKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPXXXXXXXXXXXXXXX 174
CS+ +V L+L L G + LG LS+L+ + L N G IP
Sbjct: 414 CSE--LVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILD 471
Query: 175 FNNFSGPFPSDFGNSFSLTTLLLDNNQYLGGI 206
FN+ +G PS N +L + L NN+ G I
Sbjct: 472 FNDLTGEIPSGLSNCTNLNWISLSNNRLTGEI 503
Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 37/96 (38%)
Query: 132 GMLAPELGQLSELKSIILRNNSFFGTIPXXXXXXXXXXXXXXXFNNFSGPFPSDFGNSFS 191
G + P L SEL S+ L N GTIP N G P + +
Sbjct: 405 GKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKT 464
Query: 192 LTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLT 227
L TL+LD N G I L ++ I + + LT
Sbjct: 465 LETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLT 500
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 36.6 bits (83), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 71/155 (45%), Gaps = 14/155 (9%)
Query: 478 KIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLH--IQEAEHLDWAMRL 535
+++ L ++ H N V + T +V EY G L + +E ++LD L
Sbjct: 55 EVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVL 114
Query: 536 RIAMGMAYCLEHMHQLTP---PIAHRNLQSSSIYLTEDYAAKISDFSFW----NNTTAAK 588
R+ + L+ H+ + + HR+L+ ++++L K+ DF ++ AK
Sbjct: 115 RVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAK 174
Query: 589 --TGS---AAMELLETSAVDLESNVYSFGTILFEM 618
G+ + E + + + +S+++S G +L+E+
Sbjct: 175 EFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 36.6 bits (83), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 9/89 (10%)
Query: 541 MAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSAAMELLETS 600
M L+++H + + HR+L+ ++ + ED KI DF + A TG
Sbjct: 135 MLKGLKYIH--SAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRWYRAP 192
Query: 601 AVDLE-------SNVYSFGTILFEMITGR 622
V L +++S G I+ EM+TG+
Sbjct: 193 EVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 36.6 bits (83), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 93/228 (40%), Gaps = 32/228 (14%)
Query: 414 PKLKRSELEAAC----EDFSNI--IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADW 467
P R EL E + N+ +GS + G+V + +G+ +AV S R
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDT--KTGLRVAVKKLS---RPFQ 60
Query: 468 SKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAE 527
S + +++ L + H+N + L+ + FT E + L HL +
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLL------DVFTPARSLEEFNDVYLVTHLMGADLN 114
Query: 528 HLDWAMRLR------IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW 581
++ +L + + L+++H + I HR+L+ S++ + ED KI D
Sbjct: 115 NIVKCQKLTDDHVQFLIYQILRGLKYIH--SADIIHRDLKPSNLAVNEDCELKILDAGLA 172
Query: 582 NNTTAAKTGSAAMELLETSAVDLE-------SNVYSFGTILFEMITGR 622
+T TG A + L +++S G I+ E++TGR
Sbjct: 173 RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 36.6 bits (83), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 93/228 (40%), Gaps = 32/228 (14%)
Query: 414 PKLKRSELEAAC----EDFSNI--IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADW 467
P R EL E + N+ +GS + G+V + +G+ +AV S R
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDT--KTGLRVAVKKLS---RPFQ 60
Query: 468 SKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAE 527
S + +++ L + H+N + L+ + FT E + L HL +
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLL------DVFTPARSLEEFNDVYLVTHLMGADLN 114
Query: 528 HLDWAMRLR------IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW 581
++ +L + + L+++H + I HR+L+ S++ + ED KI D
Sbjct: 115 NIVKCQKLTDDHVQFLIYQILRGLKYIH--SADIIHRDLKPSNLAVNEDCELKILDRGLA 172
Query: 582 NNTTAAKTGSAAMELLETSAVDLE-------SNVYSFGTILFEMITGR 622
+T TG A + L +++S G I+ E++TGR
Sbjct: 173 RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 36.2 bits (82), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 49/125 (39%), Gaps = 2/125 (1%)
Query: 120 VVILNLRDLCLGGMLAPELGQ--LSELKSIILRNNSFFGTIPXXXXXXXXXXXXXXXFNN 177
++ L+L G + P L Q + L+ + L+NN F G IP FN
Sbjct: 370 LLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNY 429
Query: 178 FSGPFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLTNAASRASCNS 237
SG PS G+ L L L N G I EL +K + + +D + LT N
Sbjct: 430 LSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNC 489
Query: 238 GLFTW 242
W
Sbjct: 490 TNLNW 494
Score = 34.3 bits (77), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 41/92 (44%), Gaps = 2/92 (2%)
Query: 115 CSDGKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPXXXXXXXXXXXXXXX 174
CS+ +V L+L L G + LG LS+L+ + L N G IP
Sbjct: 417 CSE--LVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILD 474
Query: 175 FNNFSGPFPSDFGNSFSLTTLLLDNNQYLGGI 206
FN+ +G PS N +L + L NN+ G I
Sbjct: 475 FNDLTGEIPSGLSNCTNLNWISLSNNRLTGEI 506
Score = 30.8 bits (68), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 37/96 (38%)
Query: 132 GMLAPELGQLSELKSIILRNNSFFGTIPXXXXXXXXXXXXXXXFNNFSGPFPSDFGNSFS 191
G + P L SEL S+ L N GTIP N G P + +
Sbjct: 408 GKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKT 467
Query: 192 LTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLT 227
L TL+LD N G I L ++ I + + LT
Sbjct: 468 LETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLT 503
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 36.2 bits (82), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 27/121 (22%), Positives = 53/121 (43%), Gaps = 10/121 (8%)
Query: 507 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIY 566
MV EY P G +F HL + A + E++H L + +R+L+ ++
Sbjct: 118 MVMEYMPGGDMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLL 173
Query: 567 LTEDYAAKISDFSFWNNT---TAAKTGSA---AMELLETSAVDLESNVYSFGTILFEMIT 620
+ + K++DF F T G+ A E++ + + + ++ G +++EM
Sbjct: 174 IDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 621 G 621
G
Sbjct: 234 G 234
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 36.2 bits (82), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 27/121 (22%), Positives = 53/121 (43%), Gaps = 10/121 (8%)
Query: 507 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIY 566
MV EY P G +F HL + A + E++H L + +R+L+ ++
Sbjct: 118 MVMEYMPGGDMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLL 173
Query: 567 LTEDYAAKISDFSFWNNT---TAAKTGSA---AMELLETSAVDLESNVYSFGTILFEMIT 620
+ + K++DF F T G+ A E++ + + + ++ G +++EM
Sbjct: 174 IDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 621 G 621
G
Sbjct: 234 G 234
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 36.2 bits (82), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 25/121 (20%), Positives = 50/121 (41%), Gaps = 10/121 (8%)
Query: 507 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIY 566
MV EY P G +F HL + A + E++H L + +R+L+ ++
Sbjct: 118 MVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLL 173
Query: 567 LTEDYAAKISDFSFWNNTTA------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT 620
+ + K++DF F A E++ + + + ++ G +++EM
Sbjct: 174 IDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 621 G 621
G
Sbjct: 234 G 234
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 36.2 bits (82), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 93/228 (40%), Gaps = 32/228 (14%)
Query: 414 PKLKRSELEAAC----EDFSNI--IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADW 467
P R EL E + N+ +GS + G+V + +G+ +AV S R
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDT--KTGLRVAVKKLS---RPFQ 60
Query: 468 SKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAE 527
S + +++ L + H+N + L+ + FT E + L HL +
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLL------DVFTPARSLEEFNDVYLVTHLMGADLN 114
Query: 528 HLDWAMRLR------IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW 581
++ +L + + L+++H + I HR+L+ S++ + ED KI D
Sbjct: 115 NIVKCQKLTDDHVQFLIYQILRGLKYIH--SADIIHRDLKPSNLAVNEDCELKILDGGLA 172
Query: 582 NNTTAAKTGSAAMELLETSAVDLE-------SNVYSFGTILFEMITGR 622
+T TG A + L +++S G I+ E++TGR
Sbjct: 173 RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 35.8 bits (81), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 25/121 (20%), Positives = 51/121 (42%), Gaps = 10/121 (8%)
Query: 507 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIY 566
MV EY P G +F HL + A + E++H L + +R+L+ ++
Sbjct: 104 MVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLL 159
Query: 567 LTEDYAAKISDFSFWNN------TTAAKTGSAAMELLETSAVDLESNVYSFGTILFEMIT 620
+ + +++DF F T A E++ + + + ++ G +++EM
Sbjct: 160 IDQQGYIQVTDFGFAKRVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 219
Query: 621 G 621
G
Sbjct: 220 G 220
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 35.8 bits (81), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 24/121 (19%), Positives = 51/121 (42%), Gaps = 10/121 (8%)
Query: 507 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIY 566
MV EY+P G +F HL + A + E++H L + +R+L+ ++
Sbjct: 118 MVMEYAPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLM 173
Query: 567 LTEDYAAKISDFSFWNNTTA------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT 620
+ + +++DF F A E++ + + + ++ G +++EM
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 621 G 621
G
Sbjct: 234 G 234
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 35.8 bits (81), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 58/129 (44%), Gaps = 14/129 (10%)
Query: 507 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIY 566
++ EY GS + L E LD I + L+++H + HR+++++++
Sbjct: 82 IIMEYLGGGSALDLL---EPGPLDETQIATILREILKGLDYLH--SEKKIHRDIKAANVL 136
Query: 567 LTEDYAAKISDFSFWNNTTAAKTGS---------AAMELLETSAVDLESNVYSFGTILFE 617
L+E K++DF T + A E+++ SA D +++++S G E
Sbjct: 137 LSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIE 196
Query: 618 MITGRISYS 626
+ G +S
Sbjct: 197 LARGEPPHS 205
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 35.8 bits (81), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 58/129 (44%), Gaps = 14/129 (10%)
Query: 507 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIY 566
++ EY GS + L E LD I + L+++H + HR+++++++
Sbjct: 82 IIMEYLGGGSALDLL---EPGPLDETQIATILREILKGLDYLH--SEKKIHRDIKAANVL 136
Query: 567 LTEDYAAKISDFSFWNNTTAAKTGS---------AAMELLETSAVDLESNVYSFGTILFE 617
L+E K++DF T + A E+++ SA D +++++S G E
Sbjct: 137 LSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIE 196
Query: 618 MITGRISYS 626
+ G +S
Sbjct: 197 LARGEPPHS 205
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 35.8 bits (81), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 25/121 (20%), Positives = 51/121 (42%), Gaps = 10/121 (8%)
Query: 507 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIY 566
MV EY P G +F HL + A + E++H L + +R+L+ ++
Sbjct: 119 MVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLL 174
Query: 567 LTEDYAAKISDFSFWNN------TTAAKTGSAAMELLETSAVDLESNVYSFGTILFEMIT 620
+ + +++DF F T A E++ + + + ++ G +++EM
Sbjct: 175 IDQQGYIQVTDFGFAKRVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 234
Query: 621 G 621
G
Sbjct: 235 G 235
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 58/129 (44%), Gaps = 14/129 (10%)
Query: 507 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIY 566
++ EY GS + L E LD I + L+++H + HR+++++++
Sbjct: 102 IIMEYLGGGSALDLL---EPGPLDETQIATILREILKGLDYLH--SEKKIHRDIKAANVL 156
Query: 567 LTEDYAAKISDFSFWNNTTAAKTGS---------AAMELLETSAVDLESNVYSFGTILFE 617
L+E K++DF T + A E+++ SA D +++++S G E
Sbjct: 157 LSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIE 216
Query: 618 MITGRISYS 626
+ G +S
Sbjct: 217 LARGEPPHS 225
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 90/217 (41%), Gaps = 31/217 (14%)
Query: 477 KKIDTLSKVNHKNFVNL-IGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRL 535
K++ + + H VNL + +E++ F MV + G L H+Q+ H
Sbjct: 64 KELQIMQGLEHPFLVNLWYSFQDEEDMF---MVVDLLLGGDL--RYHLQQNVHFKEETVK 118
Query: 536 RIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSAAME 595
+ L+++ I HR+++ +I L E I+DF+ AAM
Sbjct: 119 LFICELVMALDYLQNQR--IIHRDMKPDNILLDEHGHVHITDFNI-----------AAML 165
Query: 596 LLETSAVDLESNVYSFGTILFEMITGR-ISYSIENGSLENWASEYLKGEQPL-------- 646
ET + +F G S++++ SL A E L+G +P
Sbjct: 166 PRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSS 225
Query: 647 KDIV---DPTLKSFQENVLEELLVVIKNCVHPDPKQR 680
K+IV + T+ ++ +E++ ++K + P+P QR
Sbjct: 226 KEIVHTFETTVVTYPSAWSQEMVSLLKKLLEPNPDQR 262
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/121 (22%), Positives = 55/121 (45%), Gaps = 10/121 (8%)
Query: 507 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIY 566
MV EY P G +F HL + + R A + E++H L + +R+L+ ++
Sbjct: 111 MVMEYVPGGEMFSHLR-RIGRFXEPHARFYAAQ-IVLTFEYLHSLD--LIYRDLKPENLL 166
Query: 567 LTEDYAAKISDFSFWNNT---TAAKTGSA---AMELLETSAVDLESNVYSFGTILFEMIT 620
+ + +++DF F T G+ A E++ + + + ++ G +++EM
Sbjct: 167 IDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 226
Query: 621 G 621
G
Sbjct: 227 G 227
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/121 (22%), Positives = 55/121 (45%), Gaps = 10/121 (8%)
Query: 507 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIY 566
MV EY P G +F HL + + R A + E++H L + +R+L+ ++
Sbjct: 118 MVMEYVPGGEMFSHLR-RIGRFXEPHARFYAAQ-IVLTFEYLHSLD--LIYRDLKPENLL 173
Query: 567 LTEDYAAKISDFSFWNNT---TAAKTGSA---AMELLETSAVDLESNVYSFGTILFEMIT 620
+ + +++DF F T G+ A E++ + + + ++ G +++EM
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 621 G 621
G
Sbjct: 234 G 234
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/121 (22%), Positives = 55/121 (45%), Gaps = 10/121 (8%)
Query: 507 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIY 566
MV EY P G +F HL + + R A + E++H L + +R+L+ ++
Sbjct: 118 MVMEYVPGGEMFSHLR-RIGRFXEPHARFYAAQ-IVLTFEYLHSLD--LIYRDLKPENLL 173
Query: 567 LTEDYAAKISDFSFWNNT---TAAKTGSA---AMELLETSAVDLESNVYSFGTILFEMIT 620
+ + +++DF F T G+ A E++ + + + ++ G +++EM
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 621 G 621
G
Sbjct: 234 G 234
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/121 (20%), Positives = 52/121 (42%), Gaps = 10/121 (8%)
Query: 507 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIY 566
MV EY P G +F HL + + R A + E++H L + +R+L+ ++
Sbjct: 119 MVMEYVPGGEMFSHLR-RIGRFXEPHARFYAAQ-IVLTFEYLHSLD--LIYRDLKPENLL 174
Query: 567 LTEDYAAKISDFSFWNNTTA------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT 620
+ + +++DF F A E++ + + + ++ G +++EM
Sbjct: 175 IDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 234
Query: 621 G 621
G
Sbjct: 235 G 235
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 58/132 (43%), Gaps = 13/132 (9%)
Query: 507 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIY 566
V EY G L HIQ+ + A +A L + + I +R+L+ ++
Sbjct: 419 FVMEYVNGGDLM--YHIQQVGRFKEPHAVFYAAEIAIGLFFLQ--SKGIIYRDLKLDNVM 474
Query: 567 LTEDYAAKISDF-----SFWNN-TTAAKTGSA---AMELLETSAVDLESNVYSFGTILFE 617
L + KI+DF + W+ TT G+ A E++ + ++FG +L+E
Sbjct: 475 LDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYE 534
Query: 618 MITGRISYSIEN 629
M+ G+ + E+
Sbjct: 535 MLAGQAPFEGED 546
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/121 (19%), Positives = 50/121 (41%), Gaps = 10/121 (8%)
Query: 507 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIY 566
MV EY P G +F HL + A + E++H L + +R+L+ ++
Sbjct: 139 MVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLL 194
Query: 567 LTEDYAAKISDFSFWNNTTA------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT 620
+ + +++DF F A E++ + + + ++ G +++EM
Sbjct: 195 IDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 254
Query: 621 G 621
G
Sbjct: 255 G 255
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/121 (21%), Positives = 53/121 (43%), Gaps = 10/121 (8%)
Query: 507 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIY 566
MV EY P G +F HL + A + E++H L + +R+L+ ++
Sbjct: 118 MVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLL 173
Query: 567 LTEDYAAKISDFSFWNNT---TAAKTGSA---AMELLETSAVDLESNVYSFGTILFEMIT 620
+ + +++DF F T G+ A E++ + + + ++ G +++EM
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 621 G 621
G
Sbjct: 234 G 234
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/121 (19%), Positives = 50/121 (41%), Gaps = 10/121 (8%)
Query: 507 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIY 566
MV EY P G +F HL + A + E++H L + +R+L+ ++
Sbjct: 118 MVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLL 173
Query: 567 LTEDYAAKISDFSFWNNTTA------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT 620
+ + +++DF F A E++ + + + ++ G +++EM
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 621 G 621
G
Sbjct: 234 G 234
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/121 (19%), Positives = 50/121 (41%), Gaps = 10/121 (8%)
Query: 507 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIY 566
MV EY P G +F HL + A + E++H L + +R+L+ ++
Sbjct: 118 MVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLL 173
Query: 567 LTEDYAAKISDFSFWNNTTA------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT 620
+ + +++DF F A E++ + + + ++ G +++EM
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 621 G 621
G
Sbjct: 234 G 234
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 71/177 (40%), Gaps = 38/177 (21%)
Query: 477 KKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHL-DW---- 531
+++ L+K+ H V E ++ SP L+ + + E+L DW
Sbjct: 52 REVKALAKLEHPGIVRYFNAWLEKNTTEKLQ--PSSPKVYLYIQMQLCRKENLKDWMNGR 109
Query: 532 --------AMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN 583
++ L I + +A +E +H + + HR+L+ S+I+ T D K+ DF
Sbjct: 110 CTIEERERSVCLHIFLQIAEAVEFLH--SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTA 167
Query: 584 ---------------TTAAKTGSAAMEL------LETSAVDLESNVYSFGTILFEMI 619
A TG +L + ++ + +++S G ILFE++
Sbjct: 168 MDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/121 (21%), Positives = 53/121 (43%), Gaps = 10/121 (8%)
Query: 507 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIY 566
MV EY P G +F HL + A + E++H L + +R+L+ ++
Sbjct: 111 MVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLL 166
Query: 567 LTEDYAAKISDFSFWNNT---TAAKTGSA---AMELLETSAVDLESNVYSFGTILFEMIT 620
+ + +++DF F T G+ A E++ + + + ++ G +++EM
Sbjct: 167 IDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 226
Query: 621 G 621
G
Sbjct: 227 G 227
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/121 (21%), Positives = 53/121 (43%), Gaps = 10/121 (8%)
Query: 507 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIY 566
MV EY P G +F HL + A + E++H L + +R+L+ ++
Sbjct: 119 MVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLL 174
Query: 567 LTEDYAAKISDFSFWNNT---TAAKTGSA---AMELLETSAVDLESNVYSFGTILFEMIT 620
+ + +++DF F T G+ A E++ + + + ++ G +++EM
Sbjct: 175 IDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 234
Query: 621 G 621
G
Sbjct: 235 G 235
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/121 (19%), Positives = 50/121 (41%), Gaps = 10/121 (8%)
Query: 507 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIY 566
MV EY P G +F HL + A + E++H L + +R+L+ ++
Sbjct: 118 MVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLL 173
Query: 567 LTEDYAAKISDFSFWNNTTA------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT 620
+ + +++DF F A E++ + + + ++ G +++EM
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 621 G 621
G
Sbjct: 234 G 234
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/121 (21%), Positives = 53/121 (43%), Gaps = 10/121 (8%)
Query: 507 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIY 566
MV EY P G +F HL + A + E++H L + +R+L+ ++
Sbjct: 119 MVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLL 174
Query: 567 LTEDYAAKISDFSFWNNT---TAAKTGSA---AMELLETSAVDLESNVYSFGTILFEMIT 620
+ + +++DF F T G+ A E++ + + + ++ G +++EM
Sbjct: 175 IDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 234
Query: 621 G 621
G
Sbjct: 235 G 235
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/121 (21%), Positives = 53/121 (43%), Gaps = 10/121 (8%)
Query: 507 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIY 566
MV EY P G +F HL + A + E++H L + +R+L+ ++
Sbjct: 118 MVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLL 173
Query: 567 LTEDYAAKISDFSFWNNT---TAAKTGSA---AMELLETSAVDLESNVYSFGTILFEMIT 620
+ + +++DF F T G+ A E++ + + + ++ G +++EM
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 621 G 621
G
Sbjct: 234 G 234
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/121 (19%), Positives = 50/121 (41%), Gaps = 10/121 (8%)
Query: 507 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIY 566
MV EY P G +F HL + A + E++H L + +R+L+ ++
Sbjct: 118 MVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLL 173
Query: 567 LTEDYAAKISDFSFWNNTTA------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT 620
+ + +++DF F A E++ + + + ++ G +++EM
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 621 G 621
G
Sbjct: 234 G 234
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/121 (21%), Positives = 53/121 (43%), Gaps = 10/121 (8%)
Query: 507 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIY 566
MV EY P G +F HL + A + E++H L + +R+L+ ++
Sbjct: 119 MVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLL 174
Query: 567 LTEDYAAKISDFSFWNNT---TAAKTGSA---AMELLETSAVDLESNVYSFGTILFEMIT 620
+ + +++DF F T G+ A E++ + + + ++ G +++EM
Sbjct: 175 IDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 234
Query: 621 G 621
G
Sbjct: 235 G 235
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/121 (19%), Positives = 50/121 (41%), Gaps = 10/121 (8%)
Query: 507 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIY 566
MV EY+P G +F HL + A + E++H L + +R+L+ ++
Sbjct: 118 MVMEYAPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLM 173
Query: 567 LTEDYAAKISDFSFWNNTTA------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT 620
+ + K++DF A E++ + + + ++ G +++EM
Sbjct: 174 IDQQGYIKVTDFGLAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 621 G 621
G
Sbjct: 234 G 234
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/121 (19%), Positives = 50/121 (41%), Gaps = 10/121 (8%)
Query: 507 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIY 566
MV EY P G +F HL + A + E++H L + +R+L+ ++
Sbjct: 119 MVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLL 174
Query: 567 LTEDYAAKISDFSFWNNTTA------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT 620
+ + +++DF F A E++ + + + ++ G +++EM
Sbjct: 175 IDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 234
Query: 621 G 621
G
Sbjct: 235 G 235
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 87/214 (40%), Gaps = 28/214 (13%)
Query: 427 DFSNIIGSFSDGTVG-TVYKGTLSSGVEIAVTSTSVKSRADWSKNLES---QFRKKIDTL 482
D ++IG V V++ T G E AV V + + LE R++ L
Sbjct: 97 DPKDVIGRGVSSVVRRCVHRAT---GHEFAVKIMEVTAERLSPEQLEEVREATRRETHIL 153
Query: 483 SKV-NHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGM 541
+V H + + LI E +VF+ G LF++L E L I +
Sbjct: 154 RQVAGHPHIITLIDSYESSS--FMFLVFDLMRKGELFDYL--TEKVALSEKETRSIMRSL 209
Query: 542 AYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKT--------GSAA 593
+ +H I HR+L+ +I L ++ ++SDF F + + G A
Sbjct: 210 LEAVSFLHANN--IVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLA 267
Query: 594 MELLETSAVDL------ESNVYSFGTILFEMITG 621
E+L+ S + E ++++ G ILF ++ G
Sbjct: 268 PEILKCSMDETHPGYGKEVDLWACGVILFTLLAG 301
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 40/203 (19%), Positives = 80/203 (39%), Gaps = 24/203 (11%)
Query: 432 IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFV 491
+GS + G+V + Y L V + S +S + +++ L + H+N +
Sbjct: 28 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTY-----RELRLLKHLKHENVI 82
Query: 492 NLIGY---CEEDEPFTRMMVFEYSPNGSLFEHLHIQ--EAEHLDWAMRLRIAMGMAYCLE 546
L+ E F+ + + L + Q EH+ + + + L+
Sbjct: 83 GLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQF-----LVYQLLRGLK 137
Query: 547 HMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSAAMELLETSAVDLE- 605
++H + I HR+L+ S++ + ED +I DF TG A + L
Sbjct: 138 YIH--SAGIIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYVATRWYRAPEIMLNW 195
Query: 606 ------SNVYSFGTILFEMITGR 622
+++S G I+ E++ G+
Sbjct: 196 MHYNQTVDIWSVGCIMAELLQGK 218
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/151 (19%), Positives = 63/151 (41%), Gaps = 9/151 (5%)
Query: 431 IIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNF 490
++ G G V+K E+ + + S + + FR+ + H+N
Sbjct: 13 LVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQN-STDAQRTFREIMILTELSGHENI 71
Query: 491 VNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLH-IQEAEHLDWAMRLRIAMGMAYCLEHMH 549
VNL+ D +VF+Y + LH + A L+ + + + ++++H
Sbjct: 72 VNLLNVLRADNDRDVYLVFDY-----METDLHAVIRANILEPVHKQYVVYQLIKVIKYLH 126
Query: 550 QLTPPIAHRNLQSSSIYLTEDYAAKISDFSF 580
+ + HR+++ S+I L + K++DF
Sbjct: 127 --SGGLLHRDMKPSNILLNAECHVKVADFGL 155
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 58/132 (43%), Gaps = 13/132 (9%)
Query: 507 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIY 566
V EY G L HIQ+ + A +A L + + I +R+L+ ++
Sbjct: 98 FVMEYVNGGDLM--YHIQQVGRFKEPHAVFYAAEIAIGLFFLQ--SKGIIYRDLKLDNVM 153
Query: 567 LTEDYAAKISDF-----SFWNN-TTAAKTGSA---AMELLETSAVDLESNVYSFGTILFE 617
L + KI+DF + W+ TT G+ A E++ + ++FG +L+E
Sbjct: 154 LDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYE 213
Query: 618 MITGRISYSIEN 629
M+ G+ + E+
Sbjct: 214 MLAGQAPFEGED 225
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 40/203 (19%), Positives = 80/203 (39%), Gaps = 24/203 (11%)
Query: 432 IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFV 491
+GS + G+V + Y L V + S +S + +++ L + H+N +
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTY-----RELRLLKHLKHENVI 90
Query: 492 NLIGY---CEEDEPFTRMMVFEYSPNGSLFEHLHIQ--EAEHLDWAMRLRIAMGMAYCLE 546
L+ E F+ + + L + Q EH+ + + + L+
Sbjct: 91 GLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQF-----LVYQLLRGLK 145
Query: 547 HMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSAAMELLETSAVDLE- 605
++H + I HR+L+ S++ + ED +I DF TG A + L
Sbjct: 146 YIH--SAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATRWYRAPEIMLNW 203
Query: 606 ------SNVYSFGTILFEMITGR 622
+++S G I+ E++ G+
Sbjct: 204 MHYNQTVDIWSVGCIMAELLQGK 226
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 60/152 (39%), Gaps = 26/152 (17%)
Query: 543 YCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAK-----TGSAAMELL 597
Y L+ H + HR+++ S+I L E K+ DF K G AA
Sbjct: 138 YYLKEKHG----VIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAP 193
Query: 598 E--------TSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDI 649
E D+ ++V+S G L E+ TG+ Y E ++ L+ E PL
Sbjct: 194 ERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFE-VLTKVLQEEPPLL-- 250
Query: 650 VDPTLKSFQENVLEELLVVIKNCVHPDPKQRP 681
P F + +K+C+ D ++RP
Sbjct: 251 --PGHMGFSGD----FQSFVKDCLTKDHRKRP 276
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 37/187 (19%), Positives = 81/187 (43%), Gaps = 20/187 (10%)
Query: 506 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSI 565
++V E G LF + + + I + ++++H + IAHR+++ ++
Sbjct: 105 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN--IAHRDVKPENL 162
Query: 566 YLTE---DYAAKISDFSFWNNTTAAKTGS--------AAMELLETSAVDLESNVYSFGTI 614
T + K++DF F TT+ + + A E+L D +++S G I
Sbjct: 163 LYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVI 222
Query: 615 LFEMITGRISYSIENG-SLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCV 673
++ ++ G + +G ++ ++ Q + +P V EE+ ++I+N +
Sbjct: 223 MYILLCGYPPFYSNHGLAISPGMKTRIRMGQ--YEFPNPEWS----EVSEEVKMLIRNLL 276
Query: 674 HPDPKQR 680
+P QR
Sbjct: 277 KTEPTQR 283
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 60/153 (39%), Gaps = 28/153 (18%)
Query: 507 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSI- 565
+VFE GS+ H+H + H + + +A L+ +H IAHR+L+ +I
Sbjct: 88 LVFEKMRGGSILSHIH--KRRHFNELEASVVVQDVASALDFLH--NKGIAHRDLKPENIL 143
Query: 566 --YLTEDYAAKISDFSFWNN----------------TTAAKTGSAAMELL-----ETSAV 602
+ + KI DF + T A E++ E S
Sbjct: 144 CEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIY 203
Query: 603 DLESNVYSFGTILFEMITGRISYSIENGSLENW 635
D +++S G IL+ +++G + GS W
Sbjct: 204 DKRCDLWSLGVILYILLSGYPPFVGRCGSDCGW 236
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 37/187 (19%), Positives = 81/187 (43%), Gaps = 20/187 (10%)
Query: 506 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSI 565
++V E G LF + + + I + ++++H + IAHR+++ ++
Sbjct: 97 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN--IAHRDVKPENL 154
Query: 566 YLTE---DYAAKISDFSFWNNTTAAKTGS--------AAMELLETSAVDLESNVYSFGTI 614
T + K++DF F TT+ + + A E+L D +++S G I
Sbjct: 155 LYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVI 214
Query: 615 LFEMITGRISYSIENG-SLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCV 673
++ ++ G + +G ++ ++ Q + +P V EE+ ++I+N +
Sbjct: 215 MYILLCGYPPFYSNHGLAISPGMKTRIRMGQ--YEFPNPEWS----EVSEEVKMLIRNLL 268
Query: 674 HPDPKQR 680
+P QR
Sbjct: 269 KTEPTQR 275
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 60/153 (39%), Gaps = 28/153 (18%)
Query: 507 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSI- 565
+VFE GS+ H+H + H + + +A L+ +H IAHR+L+ +I
Sbjct: 88 LVFEKMRGGSILSHIH--KRRHFNELEASVVVQDVASALDFLH--NKGIAHRDLKPENIL 143
Query: 566 --YLTEDYAAKISDFSFWNN----------------TTAAKTGSAAMELL-----ETSAV 602
+ + KI DF + T A E++ E S
Sbjct: 144 CEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIY 203
Query: 603 DLESNVYSFGTILFEMITGRISYSIENGSLENW 635
D +++S G IL+ +++G + GS W
Sbjct: 204 DKRCDLWSLGVILYILLSGYPPFVGRCGSDCGW 236
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 40/203 (19%), Positives = 80/203 (39%), Gaps = 24/203 (11%)
Query: 432 IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFV 491
+GS + G+V + Y L V + S +S + +++ L + H+N +
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTY-----RELRLLKHLKHENVI 90
Query: 492 NLIGY---CEEDEPFTRMMVFEYSPNGSLFEHLHIQ--EAEHLDWAMRLRIAMGMAYCLE 546
L+ E F+ + + L + Q EH+ + + + L+
Sbjct: 91 GLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQF-----LVYQLLRGLK 145
Query: 547 HMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSAAMELLETSAVDLE- 605
++H + I HR+L+ S++ + ED +I DF TG A + L
Sbjct: 146 YIH--SAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATRWYRAPEIMLNW 203
Query: 606 ------SNVYSFGTILFEMITGR 622
+++S G I+ E++ G+
Sbjct: 204 MHYNQTVDIWSVGCIMAELLQGK 226
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 38/186 (20%), Positives = 79/186 (42%), Gaps = 18/186 (9%)
Query: 506 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSI 565
++V E G LF + + + I + ++++H + IAHR+++ ++
Sbjct: 95 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN--IAHRDVKPENL 152
Query: 566 YLTE---DYAAKISDFSFWNNTTAAKTGS--------AAMELLETSAVDLESNVYSFGTI 614
T + K++DF F TT+ + + A E+L D +++S G I
Sbjct: 153 LYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVI 212
Query: 615 LFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVH 674
++ ++ G + +G S +K + P + V EE+ ++I+N +
Sbjct: 213 MYILLCGYPPFYSNHGLA---ISPGMKTRIRMGQYEFPNPE--WSEVSEEVKMLIRNLLK 267
Query: 675 PDPKQR 680
+P QR
Sbjct: 268 TEPTQR 273
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 38/186 (20%), Positives = 79/186 (42%), Gaps = 18/186 (9%)
Query: 506 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSI 565
++V E G LF + + + I + ++++H + IAHR+++ ++
Sbjct: 90 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN--IAHRDVKPENL 147
Query: 566 YLTE---DYAAKISDFSFWNNTTAAKTGS--------AAMELLETSAVDLESNVYSFGTI 614
T + K++DF F TT+ + + A E+L D +++S G I
Sbjct: 148 LYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVI 207
Query: 615 LFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVH 674
++ ++ G + +G S +K + P + V EE+ ++I+N +
Sbjct: 208 MYILLCGYPPFYSNHGLA---ISPGMKTRIRMGQYEFPNPE--WSEVSEEVKMLIRNLLK 262
Query: 675 PDPKQR 680
+P QR
Sbjct: 263 TEPTQR 268
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 38/186 (20%), Positives = 79/186 (42%), Gaps = 18/186 (9%)
Query: 506 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSI 565
++V E G LF + + + I + ++++H + IAHR+++ ++
Sbjct: 96 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN--IAHRDVKPENL 153
Query: 566 YLTE---DYAAKISDFSFWNNTTAAKTGS--------AAMELLETSAVDLESNVYSFGTI 614
T + K++DF F TT+ + + A E+L D +++S G I
Sbjct: 154 LYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVI 213
Query: 615 LFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVH 674
++ ++ G + +G S +K + P + V EE+ ++I+N +
Sbjct: 214 MYILLCGYPPFYSNHGLA---ISPGMKTRIRMGQYEFPNPE--WSEVSEEVKMLIRNLLK 268
Query: 675 PDPKQR 680
+P QR
Sbjct: 269 TEPTQR 274
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 33.5 bits (75), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 38/186 (20%), Positives = 79/186 (42%), Gaps = 18/186 (9%)
Query: 506 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSI 565
++V E G LF + + + I + ++++H + IAHR+++ ++
Sbjct: 89 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN--IAHRDVKPENL 146
Query: 566 YLTE---DYAAKISDFSFWNNTTAAKTGS--------AAMELLETSAVDLESNVYSFGTI 614
T + K++DF F TT+ + + A E+L D +++S G I
Sbjct: 147 LYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVI 206
Query: 615 LFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVH 674
++ ++ G + +G S +K + P + V EE+ ++I+N +
Sbjct: 207 MYILLCGYPPFYSNHGLA---ISPGMKTRIRMGQYEFPNPE--WSEVSEEVKMLIRNLLK 261
Query: 675 PDPKQR 680
+P QR
Sbjct: 262 TEPTQR 267
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 33.5 bits (75), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 37/187 (19%), Positives = 81/187 (43%), Gaps = 20/187 (10%)
Query: 506 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSI 565
++V E G LF + + + I + ++++H + IAHR+++ ++
Sbjct: 135 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN--IAHRDVKPENL 192
Query: 566 YLTE---DYAAKISDFSFWNNTTAAKTGS--------AAMELLETSAVDLESNVYSFGTI 614
T + K++DF F TT+ + + A E+L D +++S G I
Sbjct: 193 LYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVI 252
Query: 615 LFEMITGRISYSIENG-SLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCV 673
++ ++ G + +G ++ ++ Q + +P V EE+ ++I+N +
Sbjct: 253 MYILLCGYPPFYSNHGLAISPGMKTRIRMGQ--YEFPNPEW----SEVSEEVKMLIRNLL 306
Query: 674 HPDPKQR 680
+P QR
Sbjct: 307 KTEPTQR 313
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 33.5 bits (75), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 37/187 (19%), Positives = 81/187 (43%), Gaps = 20/187 (10%)
Query: 506 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSI 565
++V E G LF + + + I + ++++H + IAHR+++ ++
Sbjct: 91 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN--IAHRDVKPENL 148
Query: 566 YLTE---DYAAKISDFSFWNNTTAAKTGS--------AAMELLETSAVDLESNVYSFGTI 614
T + K++DF F TT+ + + A E+L D +++S G I
Sbjct: 149 LYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVI 208
Query: 615 LFEMITGRISYSIENG-SLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCV 673
++ ++ G + +G ++ ++ Q + +P V EE+ ++I+N +
Sbjct: 209 MYILLCGYPPFYSNHGLAISPGMKTRIRMGQ--YEFPNPEW----SEVSEEVKMLIRNLL 262
Query: 674 HPDPKQR 680
+P QR
Sbjct: 263 KTEPTQR 269
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 33.5 bits (75), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 38/186 (20%), Positives = 79/186 (42%), Gaps = 18/186 (9%)
Query: 506 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSI 565
++V E G LF + + + I + ++++H + IAHR+++ ++
Sbjct: 89 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN--IAHRDVKPENL 146
Query: 566 YLTE---DYAAKISDFSFWNNTTAAKTGS--------AAMELLETSAVDLESNVYSFGTI 614
T + K++DF F TT+ + + A E+L D +++S G I
Sbjct: 147 LYTSKRPNAILKLTDFGFAKETTSHNSLTEPCYTPYYVAPEVLGPEKYDKSCDMWSLGVI 206
Query: 615 LFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVH 674
++ ++ G + +G S +K + P + V EE+ ++I+N +
Sbjct: 207 MYILLCGYPPFYSNHGLA---ISPGMKTRIRMGQYEFPNPE--WSEVSEEVKMLIRNLLK 261
Query: 675 PDPKQR 680
+P QR
Sbjct: 262 TEPTQR 267
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 33.1 bits (74), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 23/121 (19%), Positives = 50/121 (41%), Gaps = 10/121 (8%)
Query: 507 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIY 566
MV EY+P G +F HL + A + E++H L + +R+L+ ++
Sbjct: 118 MVMEYAPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLM 173
Query: 567 LTEDYAAKISDFSFWNNTTA------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT 620
+ + +++DF A E++ + + + ++ G +++EM
Sbjct: 174 IDQQGYIQVTDFGLAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 621 G 621
G
Sbjct: 234 G 234
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 38/186 (20%), Positives = 79/186 (42%), Gaps = 18/186 (9%)
Query: 506 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSI 565
++V E G LF + + + I + ++++H + IAHR+++ ++
Sbjct: 91 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN--IAHRDVKPENL 148
Query: 566 YLTE---DYAAKISDFSFWNNTTAAKTGS--------AAMELLETSAVDLESNVYSFGTI 614
T + K++DF F TT+ + + A E+L D +++S G I
Sbjct: 149 LYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVI 208
Query: 615 LFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVH 674
++ ++ G + +G S +K + P + V EE+ ++I+N +
Sbjct: 209 MYILLCGYPPFYSNHGLA---ISPGMKTRIRMGQYEFPNPE--WSEVSEEVKMLIRNLLK 263
Query: 675 PDPKQR 680
+P QR
Sbjct: 264 TEPTQR 269
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 37/187 (19%), Positives = 81/187 (43%), Gaps = 20/187 (10%)
Query: 506 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSI 565
++V E G LF + + + I + ++++H + IAHR+++ ++
Sbjct: 141 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN--IAHRDVKPENL 198
Query: 566 YLTE---DYAAKISDFSFWNNTTAAKTGS--------AAMELLETSAVDLESNVYSFGTI 614
T + K++DF F TT+ + + A E+L D +++S G I
Sbjct: 199 LYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVI 258
Query: 615 LFEMITGRISYSIENG-SLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCV 673
++ ++ G + +G ++ ++ Q + +P V EE+ ++I+N +
Sbjct: 259 MYILLCGYPPFYSNHGLAISPGMKTRIRMGQ--YEFPNPEW----SEVSEEVKMLIRNLL 312
Query: 674 HPDPKQR 680
+P QR
Sbjct: 313 KTEPTQR 319
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 33.1 bits (74), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 25/121 (20%), Positives = 52/121 (42%), Gaps = 10/121 (8%)
Query: 507 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIY 566
MV EY G +F HL + A + E++H L + +R+L+ ++
Sbjct: 139 MVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLL 194
Query: 567 LTEDYAAKISDFSFWNNTTAAK---TGSA---AMELLETSAVDLESNVYSFGTILFEMIT 620
+ + +++DF F A G+ A E++ + + + ++ G +++EM
Sbjct: 195 IDQQGYIQVTDFGFAKRVKGATWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 254
Query: 621 G 621
G
Sbjct: 255 G 255
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 33.1 bits (74), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 87/209 (41%), Gaps = 50/209 (23%)
Query: 512 SPNGSLFEHLHIQEAEHL-DWAMR------------LRIAMGMAYCLEHMHQLTPPIAHR 558
SP L+ + + E+L DW R L I + +A +E +H + + HR
Sbjct: 131 SPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLH--SKGLMHR 188
Query: 559 NLQSSSIYLTEDYAAKISDFSFWN------------------NTTAAKTGSA---AMELL 597
+L+ S+I+ T D K+ DF T + G+ + E +
Sbjct: 189 DLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQI 248
Query: 598 ETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSF 657
+ + +++S G ILFE++ S+S + E ++ ++++ P L F
Sbjct: 249 HGNNYSHKVDIFSLGLILFELL---YSFSTQ--------MERVRIITDVRNLKFPLL--F 295
Query: 658 QENVLEELLVVIKNCVHPDPKQRPSMRGI 686
+ +E ++V ++ + P P +RP I
Sbjct: 296 TQKYPQEHMMV-QDMLSPSPTERPEATDI 323
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 32.7 bits (73), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 26/121 (21%), Positives = 52/121 (42%), Gaps = 10/121 (8%)
Query: 507 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIY 566
MV EY G +F HL + A + E++H L + +R+L+ ++
Sbjct: 105 MVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLL 160
Query: 567 LTEDYAAKISDFSFWNNT---TAAKTGSA---AMELLETSAVDLESNVYSFGTILFEMIT 620
+ E +++DF F T G+ A E++ + + + ++ G +++EM
Sbjct: 161 IDEQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 220
Query: 621 G 621
G
Sbjct: 221 G 221
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 32.7 bits (73), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 24/121 (19%), Positives = 50/121 (41%), Gaps = 10/121 (8%)
Query: 507 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIY 566
MV EY G +F HL + A + E++H L + +R+L+ ++
Sbjct: 118 MVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLL 173
Query: 567 LTEDYAAKISDFSFWNNTT------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMIT 620
+ + +++DF F A A E++ + + + ++ G +++EM
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWXLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 621 G 621
G
Sbjct: 234 G 234
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 32.7 bits (73), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 32/156 (20%), Positives = 63/156 (40%), Gaps = 25/156 (16%)
Query: 435 FSDGTVGTVYKGTLSSGVEI-AVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNL 493
+G TVYK + +I A+ + R++ + ++I L +++H N + L
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGL 77
Query: 494 IGYCEEDEPFTRMMVFEY---------SPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYC 544
+ + +VF++ N + HI+ A L G+ Y
Sbjct: 78 LDAFGHKSNIS--LVFDFMETDLEVIIKDNSLVLTPSHIK-------AYMLMTLQGLEYL 128
Query: 545 LEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF 580
+H I HR+L+ +++ L E+ K++DF
Sbjct: 129 HQHW------ILHRDLKPNNLLLDENGVLKLADFGL 158
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 32.3 bits (72), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 23/121 (19%), Positives = 50/121 (41%), Gaps = 10/121 (8%)
Query: 507 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIY 566
MV EY G +F HL + A + E++H L + +R+L+ ++
Sbjct: 118 MVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLL 173
Query: 567 LTEDYAAKISDFSFWNNTTA------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT 620
+ + +++DF F + A E++ + + + ++ G +++EM
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWXLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 621 G 621
G
Sbjct: 234 G 234
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/121 (19%), Positives = 51/121 (42%), Gaps = 10/121 (8%)
Query: 507 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIY 566
MV EY G +F HL + + R A + E++H L + +R+L+ ++
Sbjct: 139 MVMEYVAGGEMFSHLR-RIGRFXEPHARFYAAQ-IVLTFEYLHSLD--LIYRDLKPENLL 194
Query: 567 LTEDYAAKISDFSFWNNTTA------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT 620
+ + +++DF F A E++ + + + ++ G +++EM
Sbjct: 195 IDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 254
Query: 621 G 621
G
Sbjct: 255 G 255
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/121 (21%), Positives = 54/121 (44%), Gaps = 10/121 (8%)
Query: 507 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIY 566
MV EY G +F HL + + R A + E++H L + +R+L+ ++
Sbjct: 118 MVMEYVAGGEMFSHLR-RIGRFXEPHARFYAAQ-IVLTFEYLHSLD--LIYRDLKPENLL 173
Query: 567 LTEDYAAKISDFSFWNNT---TAAKTGSA---AMELLETSAVDLESNVYSFGTILFEMIT 620
+ + +++DF F T G+ A E++ + + + ++ G +++EM
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 621 G 621
G
Sbjct: 234 G 234
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/121 (19%), Positives = 51/121 (42%), Gaps = 10/121 (8%)
Query: 507 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIY 566
MV EY G +F HL + + R A + E++H L + +R+L+ ++
Sbjct: 118 MVMEYVAGGEMFSHLR-RIGRFXEPHARFYAAQ-IVLTFEYLHSLD--LIYRDLKPENLL 173
Query: 567 LTEDYAAKISDFSFWNNTTA------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT 620
+ + +++DF F A E++ + + + ++ G +++EM
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 621 G 621
G
Sbjct: 234 G 234
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/121 (21%), Positives = 54/121 (44%), Gaps = 10/121 (8%)
Query: 507 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIY 566
MV EY G +F HL + + R A + E++H L + +R+L+ ++
Sbjct: 113 MVMEYVAGGEMFSHLR-RIGRFXEPHARFYAAQ-IVLTFEYLHSLD--LIYRDLKPENLL 168
Query: 567 LTEDYAAKISDFSFWNNT---TAAKTGSA---AMELLETSAVDLESNVYSFGTILFEMIT 620
+ + +++DF F T G+ A E++ + + + ++ G +++EM
Sbjct: 169 IDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 228
Query: 621 G 621
G
Sbjct: 229 G 229
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/121 (21%), Positives = 54/121 (44%), Gaps = 10/121 (8%)
Query: 507 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIY 566
MV EY G +F HL + + R A + E++H L + +R+L+ ++
Sbjct: 118 MVMEYVAGGEMFSHLR-RIGRFXEPHARFYAAQ-IVLTFEYLHSLD--LIYRDLKPENLL 173
Query: 567 LTEDYAAKISDFSFWNNT---TAAKTGSA---AMELLETSAVDLESNVYSFGTILFEMIT 620
+ + +++DF F T G+ A E++ + + + ++ G +++EM
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 621 G 621
G
Sbjct: 234 G 234
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/121 (19%), Positives = 51/121 (42%), Gaps = 10/121 (8%)
Query: 507 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIY 566
MV EY G +F HL + + R A + E++H L + +R+L+ ++
Sbjct: 118 MVMEYVAGGEMFSHLR-RIGRFAEPHARFYAAQ-IVLTFEYLHSLD--LIYRDLKPENLL 173
Query: 567 LTEDYAAKISDFSFWNNTTA------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT 620
+ + +++DF F A E++ + + + ++ G +++EM
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 621 G 621
G
Sbjct: 234 G 234
>pdb|3IEF|A Chain A, Crystal Structure Of Trna Guanine-N1-Methyltransferase
From Bartonella Henselae Using Mpcs.
pdb|3IEF|B Chain B, Crystal Structure Of Trna Guanine-N1-Methyltransferase
From Bartonella Henselae Using Mpcs
Length = 233
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
Query: 405 LQKAFVTGVPKLKRSELEAACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSR 464
L A V +P + +E+ A CE F N + T V++G G+ +TS K+
Sbjct: 147 LLDAIVRLLPGVMGNEISAKCESFENGLLEHPQYTRPAVFEG---RGIPPVLTSGHHKAI 203
Query: 465 ADW-SKNLESQFRKKIDTLSKVNHKN 489
A+W + ES R++ L + +KN
Sbjct: 204 ANWRQQQAESLTRQRRPDLYALYNKN 229
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/121 (20%), Positives = 52/121 (42%), Gaps = 10/121 (8%)
Query: 507 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIY 566
MV EY G +F HL + A + E++H L + +R+L+ ++
Sbjct: 118 MVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLL 173
Query: 567 LTEDYAAKISDFSFWNNT---TAAKTGSA---AMELLETSAVDLESNVYSFGTILFEMIT 620
+ + +++DF F T G+ A E++ + + + ++ G +++EM
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWXLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 621 G 621
G
Sbjct: 234 G 234
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/121 (20%), Positives = 52/121 (42%), Gaps = 10/121 (8%)
Query: 507 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIY 566
MV EY G +F HL + A + E++H L + +R+L+ ++
Sbjct: 118 MVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLL 173
Query: 567 LTEDYAAKISDFSFWNNT---TAAKTGSA---AMELLETSAVDLESNVYSFGTILFEMIT 620
+ + +++DF F T G+ A E++ + + + ++ G +++EM
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 621 G 621
G
Sbjct: 234 G 234
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 36/178 (20%), Positives = 73/178 (41%), Gaps = 23/178 (12%)
Query: 506 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSI 565
++V E G LF + + + I + ++++H + IAHR+++ ++
Sbjct: 91 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN--IAHRDVKPENL 148
Query: 566 YLTE---DYAAKISDFSFWNNTTAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGR 622
T + K++DF F TT K D +++S G I++ ++ G
Sbjct: 149 LYTSKRPNAILKLTDFGFAKETTGEK-------------YDKSCDMWSLGVIMYILLCGY 195
Query: 623 ISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQR 680
+ +G S +K + P + V EE+ ++I+N + +P QR
Sbjct: 196 PPFYSNHGLA---ISPGMKTRIRMGQYEFPNPE--WSEVSEEVKMLIRNLLKTEPTQR 248
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/121 (20%), Positives = 52/121 (42%), Gaps = 10/121 (8%)
Query: 507 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIY 566
MV EY G +F HL + A + E++H L + +R+L+ ++
Sbjct: 118 MVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLL 173
Query: 567 LTEDYAAKISDFSFWNNT---TAAKTGSA---AMELLETSAVDLESNVYSFGTILFEMIT 620
+ + +++DF F T G+ A E++ + + + ++ G +++EM
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 621 G 621
G
Sbjct: 234 G 234
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/121 (20%), Positives = 52/121 (42%), Gaps = 10/121 (8%)
Query: 507 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIY 566
MV EY G +F HL + A + E++H L + +R+L+ ++
Sbjct: 118 MVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLL 173
Query: 567 LTEDYAAKISDFSFWNNT---TAAKTGSA---AMELLETSAVDLESNVYSFGTILFEMIT 620
+ + +++DF F T G+ A E++ + + + ++ G +++EM
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 621 G 621
G
Sbjct: 234 G 234
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 48/102 (47%), Gaps = 5/102 (4%)
Query: 478 KIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRI 537
+I LS+V H N + ++ E ++ F ++++ ++ LF I LD + I
Sbjct: 79 EIAILSRVEHANIIKVLDIFE-NQGFFQLVMEKHGSGLDLFAF--IDRHPRLDEPLASYI 135
Query: 538 AMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFS 579
+ + ++ I HR+++ +I + ED+ K+ DF
Sbjct: 136 FRQLVSAVGYLR--LKDIIHRDIKDENIVIAEDFTIKLIDFG 175
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/121 (20%), Positives = 52/121 (42%), Gaps = 10/121 (8%)
Query: 507 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIY 566
MV EY G +F HL + A + E++H L + +R+L+ ++
Sbjct: 118 MVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLL 173
Query: 567 LTEDYAAKISDFSFWNNT---TAAKTGSA---AMELLETSAVDLESNVYSFGTILFEMIT 620
+ + +++DF F T G+ A E++ + + + ++ G +++EM
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 621 G 621
G
Sbjct: 234 G 234
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/121 (19%), Positives = 49/121 (40%), Gaps = 10/121 (8%)
Query: 507 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIY 566
MV EY G +F HL + A + E++H L + +R+L+ ++
Sbjct: 118 MVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLL 173
Query: 567 LTEDYAAKISDFSFWNNTTA------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT 620
+ + +++DF F A E++ + + + ++ G +++EM
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 621 G 621
G
Sbjct: 234 G 234
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/121 (20%), Positives = 52/121 (42%), Gaps = 10/121 (8%)
Query: 507 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIY 566
MV EY G +F HL + A + E++H L + +R+L+ ++
Sbjct: 118 MVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLI 173
Query: 567 LTEDYAAKISDFSFWNNT---TAAKTGSA---AMELLETSAVDLESNVYSFGTILFEMIT 620
+ + +++DF F T G+ A E++ + + + ++ G +++EM
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAA 233
Query: 621 G 621
G
Sbjct: 234 G 234
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/121 (20%), Positives = 52/121 (42%), Gaps = 10/121 (8%)
Query: 507 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIY 566
MV EY G +F HL + A + E++H L + +R+L+ ++
Sbjct: 119 MVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLL 174
Query: 567 LTEDYAAKISDFSFWNNT---TAAKTGSA---AMELLETSAVDLESNVYSFGTILFEMIT 620
+ + +++DF F T G+ A E++ + + + ++ G +++EM
Sbjct: 175 IDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 234
Query: 621 G 621
G
Sbjct: 235 G 235
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/121 (20%), Positives = 52/121 (42%), Gaps = 10/121 (8%)
Query: 507 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIY 566
MV EY G +F HL + A + E++H L + +R+L+ ++
Sbjct: 118 MVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLL 173
Query: 567 LTEDYAAKISDFSFWNNT---TAAKTGSA---AMELLETSAVDLESNVYSFGTILFEMIT 620
+ + +++DF F T G+ A E++ + + + ++ G +++EM
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 621 G 621
G
Sbjct: 234 G 234
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 12/83 (14%)
Query: 607 NVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLK-SFQENVLEEL 665
+V+S G IL+ M G+ + + N S+ L I+DP + F + ++L
Sbjct: 249 DVWSLGCILYYMTYGKTPFQ----QIINQISK-------LHAIIDPNHEIEFPDIPEKDL 297
Query: 666 LVVIKNCVHPDPKQRPSMRGIAA 688
V+K C+ DPKQR S+ + A
Sbjct: 298 QDVLKCCLKRDPKQRISIPELLA 320
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 12/83 (14%)
Query: 607 NVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLK-SFQENVLEEL 665
+V+S G IL+ M G+ + + N S+ L I+DP + F + ++L
Sbjct: 249 DVWSLGCILYYMTYGKTPFQ----QIINQISK-------LHAIIDPNHEIEFPDIPEKDL 297
Query: 666 LVVIKNCVHPDPKQRPSMRGIAA 688
V+K C+ DPKQR S+ + A
Sbjct: 298 QDVLKCCLKRDPKQRISIPELLA 320
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 12/83 (14%)
Query: 607 NVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLK-SFQENVLEEL 665
+V+S G IL+ M G+ + + N S+ L I+DP + F + ++L
Sbjct: 249 DVWSLGCILYYMTYGKTPFQ----QIINQISK-------LHAIIDPNHEIEFPDIPEKDL 297
Query: 666 LVVIKNCVHPDPKQRPSMRGIAA 688
V+K C+ DPKQR S+ + A
Sbjct: 298 QDVLKCCLKRDPKQRISIPELLA 320
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 30.8 bits (68), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 12/83 (14%)
Query: 607 NVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLK-SFQENVLEEL 665
+V+S G IL+ M G+ + + N S+ L I+DP + F + ++L
Sbjct: 201 DVWSLGCILYYMTYGKTPFQ----QIINQISK-------LHAIIDPNHEIEFPDIPEKDL 249
Query: 666 LVVIKNCVHPDPKQRPSMRGIAA 688
V+K C+ DPKQR S+ + A
Sbjct: 250 QDVLKCCLKRDPKQRISIPELLA 272
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 30.8 bits (68), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 12/83 (14%)
Query: 607 NVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLK-SFQENVLEEL 665
+V+S G IL+ M G+ + + N S+ L I+DP + F + ++L
Sbjct: 202 DVWSLGCILYYMTYGKTPFQ----QIINQISK-------LHAIIDPNHEIEFPDIPEKDL 250
Query: 666 LVVIKNCVHPDPKQRPSMRGIAA 688
V+K C+ DPKQR S+ + A
Sbjct: 251 QDVLKCCLKRDPKQRISIPELLA 273
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 12/83 (14%)
Query: 607 NVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLK-SFQENVLEEL 665
+V+S G IL+ M G+ + + N S+ L I+DP + F + ++L
Sbjct: 205 DVWSLGCILYYMTYGKTPFQ----QIINQISK-------LHAIIDPNHEIEFPDIPEKDL 253
Query: 666 LVVIKNCVHPDPKQRPSMRGIAA 688
V+K C+ DPKQR S+ + A
Sbjct: 254 QDVLKCCLKRDPKQRISIPELLA 276
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 12/83 (14%)
Query: 607 NVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLK-SFQENVLEEL 665
+V+S G IL+ M G+ + + N S+ L I+DP + F + ++L
Sbjct: 221 DVWSLGCILYYMTYGKTPFQ----QIINQISK-------LHAIIDPNHEIEFPDIPEKDL 269
Query: 666 LVVIKNCVHPDPKQRPSMRGIAA 688
V+K C+ DPKQR S+ + A
Sbjct: 270 QDVLKCCLKRDPKQRISIPELLA 292
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 12/83 (14%)
Query: 607 NVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLK-SFQENVLEEL 665
+V+S G IL+ M G+ + + N S+ L I+DP + F + ++L
Sbjct: 221 DVWSLGCILYYMTYGKTPFQ----QIINQISK-------LHAIIDPNHEIEFPDIPEKDL 269
Query: 666 LVVIKNCVHPDPKQRPSMRGIAA 688
V+K C+ DPKQR S+ + A
Sbjct: 270 QDVLKCCLKRDPKQRISIPELLA 292
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 29.6 bits (65), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 64/148 (43%), Gaps = 21/148 (14%)
Query: 438 GTVGTVYKGTLSSGVEIA----VTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNL 493
G+ G VY E+ ++ + +S W + K++ L K+ H N +
Sbjct: 65 GSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDII-----KEVRFLQKLRHPNTIQY 119
Query: 494 IG-YCEEDEPFTRMMVFEYS-PNGSLFEHLHIQEAEHLDWAMRLRIAM-GMAYCLEHMHQ 550
G Y E T +V EY + S +H + + ++ A A+ G+AY H H
Sbjct: 120 RGCYLRE---HTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYL--HSHN 174
Query: 551 LTPPIAHRNLQSSSIYLTEDYAAKISDF 578
+ HR++++ +I L+E K+ DF
Sbjct: 175 MI----HRDVKAGNILLSEPGLVKLGDF 198
>pdb|3EBC|A Chain A, Structure Of N141a Hincii With Cognate Dna
pdb|3EBC|B Chain B, Structure Of N141a Hincii With Cognate Dna
Length = 317
Score = 29.3 bits (64), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 5/51 (9%)
Query: 629 NGSLENWASEYLK-----GEQPLKDIVDPTLKSFQENVLEELLVVIKNCVH 674
NG+ E WA YLK EQ ++D +K F++ +L +V N V
Sbjct: 222 NGTREEWAKSYLKHFVTQAEQRAISMIDKFVKPFKKYILRSRELVDPNSVQ 272
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 29.3 bits (64), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 64/148 (43%), Gaps = 21/148 (14%)
Query: 438 GTVGTVYKGTLSSGVEIA----VTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNL 493
G+ G VY E+ ++ + +S W + K++ L K+ H N +
Sbjct: 26 GSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDII-----KEVRFLQKLRHPNTIQY 80
Query: 494 IG-YCEEDEPFTRMMVFEYS-PNGSLFEHLHIQEAEHLDWAMRLRIAM-GMAYCLEHMHQ 550
G Y E T +V EY + S +H + + ++ A A+ G+AY H H
Sbjct: 81 RGCYLRE---HTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYL--HSHN 135
Query: 551 LTPPIAHRNLQSSSIYLTEDYAAKISDF 578
+ HR++++ +I L+E K+ DF
Sbjct: 136 MI----HRDVKAGNILLSEPGLVKLGDF 159
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.132 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,896,037
Number of Sequences: 62578
Number of extensions: 661906
Number of successful extensions: 2887
Number of sequences better than 100.0: 760
Number of HSP's better than 100.0 without gapping: 202
Number of HSP's successfully gapped in prelim test: 558
Number of HSP's that attempted gapping in prelim test: 2144
Number of HSP's gapped (non-prelim): 796
length of query: 721
length of database: 14,973,337
effective HSP length: 106
effective length of query: 615
effective length of database: 8,340,069
effective search space: 5129142435
effective search space used: 5129142435
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)