Query 004979
Match_columns 721
No_of_seqs 649 out of 4736
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 11:40:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004979.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004979hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4asz_A BDNF/NT-3 growth factor 100.0 2.8E-52 9.5E-57 438.4 19.6 248 430-698 16-292 (299)
2 4aoj_A High affinity nerve gro 100.0 9.5E-52 3.3E-56 440.2 23.4 247 430-697 44-321 (329)
3 3omv_A RAF proto-oncogene seri 100.0 1.4E-51 4.8E-56 433.3 24.1 251 430-698 39-303 (307)
4 4gt4_A Tyrosine-protein kinase 100.0 3.1E-52 1.1E-56 439.8 18.5 244 430-693 29-304 (308)
5 4b9d_A Serine/threonine-protei 100.0 6.3E-50 2.2E-54 426.8 21.0 241 429-688 26-276 (350)
6 3fpq_A Serine/threonine-protei 100.0 2.6E-49 9E-54 413.0 20.8 243 430-688 29-282 (290)
7 4g3f_A NF-kappa-beta-inducing 100.0 1.4E-49 4.7E-54 422.2 18.1 250 430-705 61-326 (336)
8 4aw0_A HPDK1, 3-phosphoinositi 100.0 7.8E-50 2.7E-54 419.2 15.5 258 429-714 34-303 (311)
9 4ase_A Vascular endothelial gr 100.0 1.8E-49 6E-54 426.2 16.5 251 430-698 67-350 (353)
10 4fih_A Serine/threonine-protei 100.0 5E-49 1.7E-53 419.2 19.1 238 429-688 76-323 (346)
11 3hmm_A TGF-beta receptor type- 100.0 8.9E-49 3E-53 413.8 18.6 252 430-697 6-299 (303)
12 3ubd_A Ribosomal protein S6 ki 100.0 6.4E-49 2.2E-53 412.1 16.6 252 429-715 26-295 (304)
13 3hyh_A Carbon catabolite-derep 100.0 1E-47 3.5E-52 397.6 22.1 238 429-688 15-262 (275)
14 4fie_A Serine/threonine-protei 100.0 6.6E-48 2.3E-52 420.5 19.8 239 428-688 152-400 (423)
15 4g31_A Eukaryotic translation 100.0 5.1E-47 1.7E-51 398.8 17.6 239 430-688 8-279 (299)
16 3v5w_A G-protein coupled recep 100.0 5.7E-44 2E-48 406.4 19.7 255 430-714 192-462 (689)
17 4b99_A Mitogen-activated prote 100.0 7.2E-44 2.5E-48 389.1 19.7 250 429-688 56-344 (398)
18 4f9c_A Cell division cycle 7-r 100.0 3.8E-43 1.3E-47 379.2 19.0 245 427-688 21-352 (361)
19 3uto_A Twitchin; kinase, muscl 100.0 2.5E-42 8.5E-47 394.8 21.1 241 429-688 159-410 (573)
20 2qkw_B Protein kinase; three-h 100.0 7.9E-42 2.7E-46 364.1 21.5 262 425-697 38-317 (321)
21 3uim_A Brassinosteroid insensi 100.0 1.7E-41 6E-46 362.0 18.8 273 413-693 17-309 (326)
22 2nru_A Interleukin-1 receptor- 100.0 1.4E-40 4.7E-45 351.8 25.2 277 412-695 11-306 (307)
23 3p86_A Serine/threonine-protei 100.0 5.4E-41 1.9E-45 355.9 20.8 252 430-698 40-301 (309)
24 2psq_A Fibroblast growth facto 100.0 9.6E-41 3.3E-45 363.1 21.6 250 429-698 83-367 (370)
25 1o6l_A RAC-beta serine/threoni 100.0 4.1E-40 1.4E-44 353.2 22.8 238 430-688 8-260 (337)
26 3soc_A Activin receptor type-2 100.0 1.9E-40 6.5E-45 353.7 20.0 250 430-697 27-320 (322)
27 3tt0_A Basic fibroblast growth 100.0 3.1E-40 1E-44 360.7 21.6 271 429-719 71-376 (382)
28 3s95_A LIMK-1, LIM domain kina 100.0 2.6E-40 8.9E-45 350.4 20.4 246 430-698 13-285 (310)
29 3kul_A Ephrin type-A receptor 100.0 3.4E-40 1.2E-44 352.3 20.4 250 429-699 51-317 (325)
30 3kmu_A ILK, integrin-linked ki 100.0 3.3E-40 1.1E-44 341.6 19.1 251 430-695 13-270 (271)
31 3fe3_A MAP/microtubule affinit 100.0 8.9E-40 3E-44 349.4 23.0 239 429-689 17-265 (328)
32 1qcf_A Haematopoetic cell kina 100.0 2.7E-40 9.2E-45 369.5 19.4 246 430-698 191-447 (454)
33 2c30_A Serine/threonine-protei 100.0 2E-39 6.7E-44 345.8 24.8 253 414-688 23-294 (321)
34 4hcu_A Tyrosine-protein kinase 100.0 1.1E-39 3.7E-44 338.3 22.2 244 430-696 13-267 (269)
35 3cbl_A C-FES, proto-oncogene t 100.0 1.2E-40 4.2E-45 363.3 15.8 246 430-696 117-375 (377)
36 1k9a_A Carboxyl-terminal SRC k 100.0 4E-40 1.4E-44 367.6 19.6 244 430-696 196-446 (450)
37 3txo_A PKC-L, NPKC-ETA, protei 100.0 3.1E-40 1.1E-44 356.4 18.1 238 430-688 26-280 (353)
38 3fxz_A Serine/threonine-protei 100.0 1.1E-39 3.8E-44 343.8 21.9 238 429-688 22-269 (297)
39 3ugc_A Tyrosine-protein kinase 100.0 1.7E-40 5.7E-45 349.2 15.3 252 429-697 12-293 (295)
40 3op5_A Serine/threonine-protei 100.0 1.4E-40 4.8E-45 361.0 15.2 275 429-714 37-345 (364)
41 4dc2_A Protein kinase C IOTA t 100.0 1.4E-39 4.7E-44 356.0 22.9 253 430-714 55-331 (396)
42 3lb7_A RAF proto-oncogene seri 100.0 2E-39 6.7E-44 343.6 23.3 251 430-698 39-303 (307)
43 4eqm_A Protein kinase; transfe 100.0 1.3E-39 4.6E-44 342.6 21.4 254 429-698 13-278 (294)
44 2yab_A Death-associated protei 100.0 1.8E-39 6.1E-44 351.5 23.0 259 427-713 12-284 (361)
45 1fot_A TPK1 delta, CAMP-depend 100.0 2.1E-39 7.2E-44 345.0 22.7 238 430-688 9-258 (318)
46 4f0f_A Serine/threonine-protei 100.0 1.4E-39 4.8E-44 340.6 21.0 251 429-693 21-287 (287)
47 3sxs_A Cytoplasmic tyrosine-pr 100.0 1.7E-39 5.7E-44 336.5 21.3 246 429-697 10-266 (268)
48 3zgw_A Maternal embryonic leuc 100.0 1E-39 3.4E-44 351.4 20.3 238 429-689 12-261 (347)
49 3gen_A Tyrosine-protein kinase 100.0 4.1E-39 1.4E-43 336.4 23.8 244 430-696 27-281 (283)
50 2qol_A Ephrin receptor; recept 100.0 5.6E-40 1.9E-44 357.4 17.8 245 430-695 48-309 (373)
51 2eva_A TAK1 kinase - TAB1 chim 100.0 2.1E-39 7E-44 343.4 21.6 252 430-703 11-271 (307)
52 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 6.7E-40 2.3E-44 366.0 18.4 247 430-699 187-444 (452)
53 4fr4_A YANK1, serine/threonine 100.0 1.3E-39 4.3E-44 355.0 19.5 254 429-714 17-284 (384)
54 1csn_A Casein kinase-1; phosph 100.0 1.1E-39 3.7E-44 343.0 18.3 262 429-712 12-297 (298)
55 3a8x_A Protein kinase C IOTA t 100.0 3.2E-39 1.1E-43 347.6 22.2 235 430-683 12-264 (345)
56 4euu_A Serine/threonine-protei 100.0 6.6E-39 2.2E-43 341.2 23.8 261 429-695 11-309 (319)
57 1rdq_E PKA C-alpha, CAMP-depen 100.0 3.1E-39 1.1E-43 348.3 21.2 238 430-688 44-293 (350)
58 2r5t_A Serine/threonine-protei 100.0 1.7E-39 5.9E-44 353.1 19.2 254 430-713 41-305 (373)
59 3q4u_A Activin receptor type-1 100.0 3.9E-39 1.3E-43 339.3 21.4 248 429-693 10-300 (301)
60 1opk_A P150, C-ABL, proto-onco 100.0 7.1E-40 2.4E-44 369.9 16.7 244 430-695 223-478 (495)
61 1luf_A Muscle-specific tyrosin 100.0 1.9E-39 6.4E-44 348.5 19.0 249 430-698 50-338 (343)
62 1xjd_A Protein kinase C, theta 100.0 1.1E-39 3.6E-44 351.1 17.0 237 430-687 20-268 (345)
63 3l9p_A Anaplastic lymphoma kin 100.0 1.6E-39 5.6E-44 353.0 18.5 248 429-696 73-346 (367)
64 3a62_A Ribosomal protein S6 ki 100.0 5.4E-39 1.9E-43 343.3 22.2 240 429-688 19-276 (327)
65 2y0a_A Death-associated protei 100.0 9E-39 3.1E-43 341.4 23.7 247 427-688 11-271 (326)
66 3niz_A Rhodanese family protei 100.0 4.7E-39 1.6E-43 341.3 21.2 251 429-688 23-300 (311)
67 3poz_A Epidermal growth factor 100.0 1.5E-39 5.2E-44 347.5 17.5 245 429-695 17-278 (327)
68 3vhe_A Vascular endothelial gr 100.0 1.2E-39 4.2E-44 352.4 16.9 250 429-696 24-356 (359)
69 2i0e_A Protein kinase C-beta I 100.0 3.8E-39 1.3E-43 347.8 20.7 238 430-688 23-276 (353)
70 3c0i_A Peripheral plasma membr 100.0 5E-39 1.7E-43 347.1 21.5 248 427-688 24-286 (351)
71 3kex_A Receptor tyrosine-prote 100.0 6.1E-40 2.1E-44 350.2 13.0 266 430-717 16-310 (325)
72 2izr_A Casein kinase I isoform 100.0 3.1E-39 1.1E-43 345.5 18.5 248 430-697 12-283 (330)
73 1tki_A Titin; serine kinase, m 100.0 5.7E-39 2E-43 342.2 20.1 241 429-689 7-258 (321)
74 2h8h_A Proto-oncogene tyrosine 100.0 2.1E-39 7E-44 369.4 17.7 246 430-698 270-526 (535)
75 4aw2_A Serine/threonine-protei 100.0 3.4E-40 1.2E-44 365.4 10.9 248 425-688 73-338 (437)
76 3qd2_B Eukaryotic translation 100.0 3.5E-39 1.2E-43 344.2 18.1 239 430-688 9-325 (332)
77 4ejn_A RAC-alpha serine/threon 100.0 4.1E-39 1.4E-43 359.1 19.4 239 429-688 150-404 (446)
78 1qpc_A LCK kinase; alpha beta 100.0 4.7E-39 1.6E-43 335.2 18.4 250 429-701 15-275 (279)
79 3h4j_B AMPK kdaid, SNF1-like p 100.0 2E-39 6.7E-44 347.7 15.9 239 429-689 11-259 (336)
80 2ivs_A Proto-oncogene tyrosine 100.0 4.5E-39 1.5E-43 341.0 18.5 248 429-696 25-312 (314)
81 2bdw_A Hypothetical protein K1 100.0 1.6E-38 5.6E-43 344.4 23.2 243 429-689 31-285 (362)
82 3soa_A Calcium/calmodulin-depe 100.0 2.9E-38 9.9E-43 351.1 25.5 242 429-688 13-267 (444)
83 3t9t_A Tyrosine-protein kinase 100.0 1.4E-38 4.9E-43 329.0 21.2 244 430-696 11-265 (267)
84 3tki_A Serine/threonine-protei 100.0 4.7E-39 1.6E-43 343.2 18.0 241 429-689 9-262 (323)
85 3gni_B Strad alpha; kinase fol 100.0 1E-38 3.5E-43 349.5 21.1 250 429-689 27-334 (389)
86 3ork_A Serine/threonine protei 100.0 9.6E-39 3.3E-43 338.7 19.8 259 429-702 14-288 (311)
87 2acx_A G protein-coupled recep 100.0 8.5E-39 2.9E-43 363.1 20.7 242 430-688 187-444 (576)
88 2pmi_A Negative RE, cyclin-dep 100.0 1.7E-38 5.7E-43 337.9 21.7 249 429-688 7-293 (317)
89 3v8s_A RHO-associated protein 100.0 7.6E-40 2.6E-44 359.8 11.5 241 430-688 72-329 (410)
90 2wqm_A Serine/threonine-protei 100.0 1.7E-38 6E-43 336.3 21.5 256 429-699 34-301 (310)
91 3qup_A Tyrosine-protein kinase 100.0 2.8E-39 9.7E-44 344.4 15.6 252 429-697 25-300 (323)
92 2zv2_A Calcium/calmodulin-depe 100.0 1.5E-38 5.1E-43 334.9 20.7 244 429-688 15-292 (298)
93 3lxp_A Non-receptor tyrosine-p 100.0 1.6E-39 5.6E-44 345.8 13.4 254 429-700 33-315 (318)
94 2vd5_A DMPK protein; serine/th 100.0 1.1E-39 3.8E-44 358.8 11.8 246 426-688 61-327 (412)
95 1t46_A HOMO sapiens V-KIT hard 100.0 2.7E-38 9.1E-43 334.9 21.9 251 429-698 25-310 (313)
96 3dtc_A Mitogen-activated prote 100.0 9.2E-39 3.1E-43 331.4 17.9 246 430-693 10-271 (271)
97 3og7_A AKAP9-BRAF fusion prote 100.0 1.2E-38 3.9E-43 334.4 18.6 249 429-695 26-288 (289)
98 2pvf_A Fibroblast growth facto 100.0 1.5E-38 5.1E-43 340.8 19.7 251 429-699 37-322 (334)
99 2jii_A Serine/threonine-protei 100.0 2.6E-39 8.8E-44 349.4 13.8 264 429-711 44-349 (352)
100 4e5w_A Tyrosine-protein kinase 100.0 9.3E-39 3.2E-43 336.7 17.7 251 428-694 22-301 (302)
101 2x4f_A Myosin light chain kina 100.0 2.6E-38 8.9E-43 344.2 21.7 238 432-688 94-342 (373)
102 2a2a_A Death-associated protei 100.0 4.5E-38 1.5E-42 335.1 22.9 260 427-714 12-285 (321)
103 3g33_A Cell division protein k 100.0 1.4E-38 5E-43 336.7 19.0 255 429-688 11-296 (308)
104 3c1x_A Hepatocyte growth facto 100.0 5.3E-39 1.8E-43 349.5 16.1 252 430-701 92-361 (373)
105 1ob3_A PFPK5, cell division co 100.0 1.2E-38 4E-43 334.2 17.9 249 429-688 4-280 (288)
106 3hko_A Calcium/calmodulin-depe 100.0 2.8E-38 9.5E-43 339.8 21.3 247 429-688 28-330 (345)
107 3c4z_A Rhodopsin kinase; Ser/T 100.0 2E-38 6.9E-43 359.0 21.0 237 430-683 188-438 (543)
108 1rjb_A FL cytokine receptor; k 100.0 1.8E-38 6E-43 341.3 19.5 251 430-699 48-338 (344)
109 2ozo_A Tyrosine-protein kinase 100.0 1.8E-38 6.2E-43 367.0 21.0 242 434-697 343-600 (613)
110 1kob_A Twitchin; kinase, intra 100.0 4.1E-38 1.4E-42 343.9 22.3 242 428-688 52-304 (387)
111 1mp8_A Focal adhesion kinase 1 100.0 5E-39 1.7E-43 335.6 14.3 246 429-696 17-277 (281)
112 1u5q_A Serine/threonine protei 100.0 2.5E-38 8.6E-43 341.1 20.2 242 429-689 56-306 (348)
113 3o0g_A Cell division protein k 100.0 2.5E-38 8.6E-43 332.2 19.5 250 429-688 4-282 (292)
114 4hgt_A Casein kinase I isoform 100.0 4.6E-39 1.6E-43 337.7 13.7 265 428-713 10-295 (296)
115 3brb_A Proto-oncogene tyrosine 100.0 3.7E-38 1.3E-42 334.2 20.7 253 430-699 37-312 (313)
116 1mqb_A Ephrin type-A receptor 100.0 4E-38 1.4E-42 337.4 21.0 246 430-696 47-310 (333)
117 4eut_A Serine/threonine-protei 100.0 2.7E-38 9.2E-43 347.1 20.1 262 429-696 11-310 (396)
118 3uzp_A CKI-delta, CKID, casein 100.0 1E-38 3.4E-43 335.3 16.0 264 429-713 11-295 (296)
119 3uc3_A Serine/threonine-protei 100.0 3.6E-38 1.2E-42 341.6 20.8 240 429-689 22-275 (361)
120 3lzb_A Epidermal growth factor 100.0 8.5E-39 2.9E-43 341.8 15.6 245 429-695 17-278 (327)
121 3mdy_A Bone morphogenetic prot 100.0 1.5E-37 5.2E-42 332.6 25.3 254 427-698 37-334 (337)
122 2eue_A Carbon catabolite derep 100.0 5.1E-38 1.7E-42 326.8 21.0 238 429-688 15-262 (275)
123 2w4o_A Calcium/calmodulin-depe 100.0 4.9E-38 1.7E-42 339.0 21.4 241 427-688 53-305 (349)
124 1byg_A CSK, protein (C-termina 100.0 1E-38 3.4E-43 332.7 15.4 246 429-697 23-275 (278)
125 2v62_A Serine/threonine-protei 100.0 1.2E-38 4.1E-43 343.1 16.3 260 429-695 39-328 (345)
126 3fdn_A Serine/threonine-protei 100.0 6.4E-38 2.2E-42 326.7 21.3 239 430-689 12-258 (279)
127 4fvq_A Tyrosine-protein kinase 100.0 8.1E-39 2.8E-43 335.0 14.6 245 429-696 10-276 (289)
128 3kfa_A Tyrosine-protein kinase 100.0 1.8E-38 6.3E-43 332.1 17.0 245 430-696 16-272 (288)
129 3g2f_A Bone morphogenetic prot 100.0 4.6E-38 1.6E-42 336.8 20.4 259 430-702 16-325 (336)
130 1u59_A Tyrosine-protein kinase 100.0 3.7E-38 1.3E-42 330.1 19.3 247 430-698 12-275 (287)
131 2y94_A 5'-AMP-activated protei 100.0 5.5E-38 1.9E-42 351.2 21.8 239 429-688 18-266 (476)
132 2buj_A Serine/threonine-protei 100.0 3.8E-38 1.3E-42 334.6 19.5 253 429-701 31-312 (317)
133 2i1m_A Macrophage colony-stimu 100.0 1.5E-38 5.1E-43 340.3 15.8 248 430-696 49-327 (333)
134 3lxl_A Tyrosine-protein kinase 100.0 2.9E-38 9.9E-43 337.4 17.7 253 429-698 25-306 (327)
135 2h34_A Serine/threonine-protei 100.0 1.3E-37 4.6E-42 329.6 22.7 252 429-698 36-299 (309)
136 1p4o_A Insulin-like growth fac 100.0 3.3E-38 1.1E-42 335.8 18.1 247 429-695 27-299 (322)
137 2a19_B Interferon-induced, dou 100.0 4.4E-38 1.5E-42 328.2 18.5 243 429-699 13-278 (284)
138 2ac3_A MAP kinase-interacting 100.0 1.3E-37 4.5E-42 330.3 22.4 242 429-688 14-295 (316)
139 3llt_A Serine/threonine kinase 100.0 6.5E-38 2.2E-42 339.2 19.9 247 429-688 37-355 (360)
140 3rp9_A Mitogen-activated prote 100.0 4.7E-38 1.6E-42 351.8 19.4 253 429-689 55-397 (458)
141 3pfq_A PKC-B, PKC-beta, protei 100.0 6.6E-38 2.3E-42 365.7 21.3 233 430-683 344-587 (674)
142 4fl3_A Tyrosine-protein kinase 100.0 3.5E-38 1.2E-42 365.6 18.8 240 434-695 376-631 (635)
143 3f66_A Hepatocyte growth facto 100.0 1.4E-37 4.9E-42 327.2 21.7 250 430-699 28-295 (298)
144 2xir_A Vascular endothelial gr 100.0 6.9E-38 2.4E-42 332.1 19.2 251 429-697 29-312 (316)
145 3pls_A Macrophage-stimulating 100.0 2.2E-37 7.5E-42 325.5 22.8 252 431-701 25-293 (298)
146 3kn6_A Ribosomal protein S6 ki 100.0 4.5E-38 1.6E-42 335.9 17.8 235 433-688 17-270 (325)
147 3cc6_A Protein tyrosine kinase 100.0 5.6E-38 1.9E-42 327.5 17.9 246 430-697 15-275 (281)
148 4agu_A Cyclin-dependent kinase 100.0 1.1E-37 3.6E-42 330.2 20.2 251 429-688 5-284 (311)
149 1fvr_A Tyrosine-protein kinase 100.0 6.4E-38 2.2E-42 334.7 18.7 249 430-698 28-303 (327)
150 3dbq_A Dual specificity protei 100.0 7.4E-38 2.5E-42 336.7 19.3 240 429-689 11-274 (343)
151 3cok_A Serine/threonine-protei 100.0 5E-38 1.7E-42 327.3 17.3 239 430-688 14-262 (278)
152 2w1i_A JAK2; chromosomal rearr 100.0 4.1E-38 1.4E-42 336.1 17.1 251 429-696 43-323 (326)
153 3is5_A Calcium-dependent prote 100.0 1.5E-37 5.2E-42 325.3 21.0 241 429-688 24-278 (285)
154 1t4h_A Serine/threonine-protei 100.0 1.4E-37 4.8E-42 326.0 20.7 244 429-688 28-282 (290)
155 1nxk_A MAP kinase-activated pr 100.0 8.2E-38 2.8E-42 343.5 19.6 238 433-689 68-322 (400)
156 1xbb_A Tyrosine-protein kinase 100.0 8.2E-38 2.8E-42 328.1 18.6 245 430-696 19-280 (291)
157 3f3z_A Calcium/calmodulin-depe 100.0 2.8E-37 9.6E-42 321.4 22.4 240 428-688 10-261 (277)
158 3oz6_A Mitogen-activated prote 100.0 5.9E-38 2E-42 343.4 18.0 250 429-689 11-329 (388)
159 3sv0_A Casein kinase I-like; t 100.0 1.3E-37 4.5E-42 348.8 21.2 265 429-715 9-295 (483)
160 3kk8_A Calcium/calmodulin depe 100.0 3.7E-37 1.2E-41 321.6 23.1 243 429-689 8-262 (284)
161 3p1a_A MYT1 kinase, membrane-a 100.0 1.5E-37 5.1E-42 329.7 20.4 236 429-688 59-304 (311)
162 3ll6_A Cyclin G-associated kin 100.0 6.3E-38 2.2E-42 335.2 17.4 251 429-700 30-313 (337)
163 3lm5_A Serine/threonine-protei 100.0 9.3E-38 3.2E-42 333.7 18.3 247 426-688 27-287 (327)
164 3bhy_A Death-associated protei 100.0 2.7E-37 9.1E-42 322.4 21.4 254 429-697 7-276 (283)
165 1vzo_A Ribosomal protein S6 ki 100.0 3.9E-38 1.4E-42 340.6 15.5 242 429-688 56-321 (355)
166 2rku_A Serine/threonine-protei 100.0 2.4E-37 8.2E-42 324.9 21.0 240 429-689 17-266 (294)
167 2owb_A Serine/threonine-protei 100.0 2E-37 7E-42 332.2 20.5 240 429-689 43-292 (335)
168 1x8b_A WEE1HU, WEE1-like prote 100.0 5.5E-38 1.9E-42 327.7 15.7 238 429-688 13-279 (289)
169 2w5a_A Serine/threonine-protei 100.0 6.3E-38 2.2E-42 326.5 16.0 247 429-690 8-269 (279)
170 2vgo_A Serine/threonine-protei 100.0 2.9E-37 9.8E-42 322.7 20.6 239 429-688 16-262 (284)
171 2zmd_A Dual specificity protei 100.0 1.9E-37 6.5E-42 339.5 20.0 240 429-689 58-321 (390)
172 3gbz_A Kinase, CMGC CDK; ssgci 100.0 4E-38 1.4E-42 336.8 14.2 248 429-688 36-318 (329)
173 3dls_A PAS domain-containing s 100.0 4.6E-38 1.6E-42 337.3 14.7 235 429-688 26-274 (335)
174 2yfx_A Tyrosine-protein kinase 100.0 1.5E-37 5.1E-42 331.8 18.6 248 429-696 32-305 (327)
175 2yex_A Serine/threonine-protei 100.0 3.6E-37 1.2E-41 320.1 21.0 240 429-688 9-261 (276)
176 3ttj_A Mitogen-activated prote 100.0 3.7E-37 1.3E-41 344.6 22.3 249 429-689 64-356 (464)
177 1u46_A ACK-1, activated CDC42 100.0 8.7E-38 3E-42 327.3 16.1 250 429-697 20-286 (291)
178 2jam_A Calcium/calmodulin-depe 100.0 7.5E-37 2.6E-41 322.9 23.2 240 429-688 11-261 (304)
179 2qr7_A Ribosomal protein S6 ki 100.0 1.4E-37 4.9E-42 334.3 17.6 239 429-689 24-278 (342)
180 2pml_X PFPK7, Ser/Thr protein 100.0 1E-37 3.5E-42 335.8 16.3 271 429-718 33-339 (348)
181 3i6u_A CDS1, serine/threonine- 100.0 2.1E-37 7.3E-42 342.4 19.1 246 428-688 136-399 (419)
182 1b6c_B TGF-B superfamily recep 100.0 6.6E-37 2.3E-41 328.5 22.4 252 426-697 41-338 (342)
183 3byv_A Rhoptry kinase; malaria 100.0 1.9E-38 6.6E-43 345.9 10.5 237 429-688 75-359 (377)
184 1cm8_A Phosphorylated MAP kina 100.0 4.3E-37 1.5E-41 334.0 21.0 255 429-694 27-315 (367)
185 1ua2_A CAK, cell division prot 100.0 1.2E-37 4.2E-42 335.4 16.6 253 429-689 12-292 (346)
186 3rgf_A Cyclin-dependent kinase 100.0 2.4E-37 8.3E-42 340.5 19.0 251 428-688 21-333 (405)
187 2wtk_C Serine/threonine-protei 100.0 8.9E-37 3.1E-41 322.0 22.6 244 429-689 7-264 (305)
188 3com_A Serine/threonine-protei 100.0 1E-36 3.5E-41 323.1 22.9 247 420-688 22-278 (314)
189 3e7e_A HBUB1, BUB1A, mitotic c 100.0 4.7E-37 1.6E-41 333.3 20.5 241 429-698 67-342 (365)
190 3a7i_A MST3 kinase, serine/thr 100.0 4.3E-37 1.5E-41 324.4 19.6 239 428-689 23-271 (303)
191 2r3i_A Cell division protein k 100.0 4.3E-37 1.5E-41 323.6 19.5 249 430-688 6-283 (299)
192 3nsz_A CK II alpha, casein kin 100.0 5.2E-37 1.8E-41 327.7 20.4 244 429-688 38-319 (330)
193 3eqc_A Dual specificity mitoge 100.0 4.1E-37 1.4E-41 333.0 19.8 250 429-688 35-324 (360)
194 3mtl_A Cell division protein k 100.0 7.7E-38 2.6E-42 333.9 13.8 248 429-688 4-281 (324)
195 2h6d_A 5'-AMP-activated protei 100.0 5.4E-37 1.9E-41 318.9 19.8 240 429-689 13-262 (276)
196 3q60_A ROP5B; pseudokinase, tr 100.0 5.7E-38 2E-42 341.3 12.3 247 430-688 65-352 (371)
197 2y7j_A Phosphorylase B kinase 100.0 2.4E-36 8.1E-41 327.9 25.0 245 429-688 96-359 (365)
198 2j7t_A Serine/threonine-protei 100.0 5E-37 1.7E-41 323.5 19.1 241 428-688 20-275 (302)
199 3lij_A Calcium/calmodulin depe 100.0 1.4E-36 4.8E-41 343.1 24.0 243 428-689 38-292 (494)
200 2clq_A Mitogen-activated prote 100.0 8.1E-37 2.8E-41 320.6 20.1 237 433-688 28-278 (295)
201 4aaa_A Cyclin-dependent kinase 100.0 4.8E-37 1.7E-41 328.6 18.7 249 429-688 27-306 (331)
202 3gxj_A TGF-beta receptor type- 100.0 5.4E-39 1.8E-43 338.4 3.4 249 429-697 5-299 (303)
203 3nyv_A Calmodulin-domain prote 100.0 6.3E-37 2.1E-41 345.1 20.1 244 428-689 27-282 (484)
204 3mwu_A Calmodulin-domain prote 100.0 1.7E-36 5.8E-41 341.8 23.5 242 429-689 24-277 (486)
205 2xrw_A Mitogen-activated prote 100.0 1.9E-36 6.6E-41 329.3 23.1 249 429-689 27-319 (371)
206 3pg1_A Mitogen-activated prote 100.0 1.1E-36 3.6E-41 329.9 20.2 263 420-689 16-317 (362)
207 3fme_A Dual specificity mitoge 100.0 5.6E-37 1.9E-41 321.0 17.3 242 429-688 9-266 (290)
208 3mi9_A Cell division protein k 100.0 1.1E-36 3.7E-41 328.5 20.0 251 429-688 19-311 (351)
209 3an0_A Dual specificity mitoge 100.0 5.1E-37 1.8E-41 329.4 17.2 240 430-688 54-310 (340)
210 1phk_A Phosphorylase kinase; g 100.0 1.6E-36 5.4E-41 319.0 20.5 245 429-688 19-283 (298)
211 2vwi_A Serine/threonine-protei 100.0 1.9E-37 6.4E-42 326.6 13.4 248 429-688 17-287 (303)
212 2b9h_A MAP kinase FUS3, mitoge 100.0 8.2E-37 2.8E-41 329.4 18.5 256 429-696 13-315 (353)
213 3n9x_A Phosphotransferase; mal 100.0 6.7E-37 2.3E-41 339.8 17.9 189 429-625 28-252 (432)
214 2ycf_A Serine/threonine-protei 100.0 1.2E-36 4.1E-41 324.1 19.0 245 427-688 10-274 (322)
215 1blx_A Cyclin-dependent kinase 100.0 2.4E-36 8.3E-41 321.8 21.2 252 429-688 13-296 (326)
216 3q5i_A Protein kinase; CDPK, m 100.0 2.3E-36 7.9E-41 342.2 22.2 244 429-688 38-301 (504)
217 1wak_A Serine/threonine-protei 100.0 6.8E-37 2.3E-41 335.0 17.2 251 429-688 39-391 (397)
218 3kvw_A DYRK2, dual specificity 100.0 9.5E-37 3.3E-41 338.1 18.5 189 429-628 99-302 (429)
219 2x7f_A TRAF2 and NCK-interacti 100.0 1.4E-36 4.9E-41 323.8 19.0 241 429-688 26-286 (326)
220 2y4i_B KSR2, HKSR2, kinase sup 100.0 2.8E-37 9.5E-42 328.1 13.4 248 430-699 36-306 (319)
221 1z57_A Dual specificity protei 100.0 1.2E-36 4.1E-41 325.3 18.2 248 429-688 16-328 (339)
222 3eb0_A Putative uncharacterize 100.0 1.1E-36 3.7E-41 332.8 17.7 252 429-694 9-329 (383)
223 1j1b_A Glycogen synthase kinas 100.0 1.7E-36 5.6E-41 335.3 18.5 252 429-694 56-344 (420)
224 2fst_X Mitogen-activated prote 100.0 1.2E-36 4.2E-41 330.2 16.8 250 429-689 31-312 (367)
225 2i6l_A Mitogen-activated prote 100.0 3E-36 1E-40 319.8 19.2 247 429-688 13-305 (320)
226 2j0j_A Focal adhesion kinase 1 100.0 1.8E-36 6.1E-41 352.5 19.1 245 430-696 393-652 (656)
227 1zy4_A Serine/threonine-protei 100.0 1.3E-35 4.4E-40 312.2 23.3 239 430-688 9-283 (303)
228 3qyz_A Mitogen-activated prote 100.0 3.8E-36 1.3E-40 326.1 19.4 250 429-689 29-314 (364)
229 4exu_A Mitogen-activated prote 100.0 4.6E-36 1.6E-40 326.3 19.3 249 429-689 44-324 (371)
230 2wei_A Calmodulin-domain prote 100.0 2.6E-35 8.9E-40 308.4 23.6 243 427-688 22-276 (287)
231 4e7w_A Glycogen synthase kinas 100.0 4E-36 1.4E-40 329.4 17.8 254 429-695 42-330 (394)
232 3cek_A Dual specificity protei 100.0 6.6E-36 2.2E-40 317.0 18.5 240 429-689 30-293 (313)
233 2vx3_A Dual specificity tyrosi 100.0 1.2E-35 4.1E-40 324.3 20.8 191 429-628 56-261 (382)
234 3uqc_A Probable conserved tran 100.0 5E-36 1.7E-40 314.1 16.8 232 429-698 33-268 (286)
235 2eu9_A Dual specificity protei 100.0 6.4E-36 2.2E-40 322.0 18.0 248 429-688 21-333 (355)
236 3coi_A Mitogen-activated prote 100.0 1.2E-35 4.2E-40 320.6 19.7 249 429-689 26-306 (353)
237 3e3p_A Protein kinase, putativ 100.0 6.6E-36 2.3E-40 323.2 17.4 263 421-695 18-323 (360)
238 3aln_A Dual specificity mitoge 100.0 1.2E-35 4.1E-40 317.0 18.0 242 430-688 25-285 (327)
239 1q8y_A SR protein kinase; tran 100.0 4.4E-36 1.5E-40 326.0 14.8 251 429-688 21-333 (373)
240 2dyl_A Dual specificity mitoge 100.0 2.6E-35 8.8E-40 312.6 20.2 241 430-688 28-283 (318)
241 2rio_A Serine/threonine-protei 100.0 3.2E-36 1.1E-40 334.5 12.5 241 427-688 15-295 (434)
242 3fhr_A MAP kinase-activated pr 100.0 7.3E-36 2.5E-40 320.3 14.1 242 430-689 31-288 (336)
243 2iwi_A Serine/threonine-protei 100.0 2E-36 6.9E-41 320.7 7.3 235 429-688 33-283 (312)
244 3m2w_A MAP kinase-activated pr 100.0 4.9E-35 1.7E-39 308.4 17.5 226 430-689 20-257 (299)
245 3a99_A Proto-oncogene serine/t 100.0 3.7E-36 1.3E-40 320.3 8.2 235 429-688 45-293 (320)
246 3p23_A Serine/threonine-protei 100.0 7.1E-35 2.4E-39 323.1 18.3 235 430-688 27-283 (432)
247 3qa8_A MGC80376 protein; kinas 100.0 1.2E-34 4E-39 332.4 12.5 261 429-696 16-310 (676)
248 2pzi_A Probable serine/threoni 100.0 3.4E-34 1.2E-38 336.0 16.5 234 429-693 82-326 (681)
249 3dzo_A Rhoptry kinase domain; 100.0 5.5E-34 1.9E-38 314.4 12.4 235 431-688 82-363 (413)
250 2vuw_A Serine/threonine-protei 100.0 4.6E-34 1.6E-38 306.1 7.1 242 429-687 22-329 (336)
251 4azs_A Methyltransferase WBDD; 99.9 3.4E-27 1.2E-31 269.6 12.2 180 436-625 243-438 (569)
252 3en9_A Glycoprotease, O-sialog 99.9 1.1E-24 3.6E-29 247.6 10.5 176 433-625 342-538 (540)
253 1ogq_A PGIP-2, polygalacturona 99.9 2.6E-23 9E-28 220.3 13.4 158 68-233 2-168 (313)
254 1zar_A RIO2 kinase; serine kin 99.9 4.5E-22 1.5E-26 207.4 8.1 159 430-610 93-274 (282)
255 3rgz_A Protein brassinosteroid 99.8 1.1E-21 3.9E-26 232.9 11.4 159 66-232 6-196 (768)
256 4ecn_A Leucine-rich repeat pro 99.8 1.1E-20 3.7E-25 224.6 12.3 157 70-233 267-536 (876)
257 4eco_A Uncharacterized protein 99.8 1.3E-20 4.4E-25 219.0 12.5 156 71-233 29-294 (636)
258 4fcg_A Uncharacterized protein 99.7 4.4E-19 1.5E-23 189.0 3.5 159 69-233 24-201 (328)
259 1zth_A RIO1 serine protein kin 99.7 2.7E-18 9.2E-23 176.4 9.2 141 429-584 49-219 (258)
260 1w8a_A SLIT protein; signaling 99.6 2E-15 6.8E-20 147.7 11.2 125 108-232 8-144 (192)
261 4gyi_A RIO2 kinase; protein ki 99.6 1.1E-15 3.9E-20 163.7 7.3 141 428-582 96-263 (397)
262 3e6j_A Variable lymphocyte rec 99.6 1E-14 3.6E-19 146.7 12.9 125 105-230 16-151 (229)
263 3rgz_A Protein brassinosteroid 99.6 1.3E-15 4.4E-20 180.9 6.1 111 123-233 613-723 (768)
264 2o6r_A Variable lymphocyte rec 99.5 2.5E-14 8.6E-19 137.7 11.7 125 108-232 7-142 (177)
265 1ogq_A PGIP-2, polygalacturona 99.5 1.1E-14 3.6E-19 154.0 6.2 116 118-233 76-193 (313)
266 2o6s_A Variable lymphocyte rec 99.5 8.6E-14 3E-18 137.6 12.4 125 107-231 6-141 (208)
267 2v70_A SLIT-2, SLIT homolog 2 99.5 6.7E-14 2.3E-18 139.9 11.2 125 108-232 11-147 (220)
268 2v9t_B SLIT homolog 2 protein 99.5 1.1E-13 3.7E-18 138.4 12.0 124 108-231 11-145 (220)
269 4fcg_A Uncharacterized protein 99.5 1.2E-13 3.9E-18 147.0 10.6 114 118-233 150-272 (328)
270 3m19_A Variable lymphocyte rec 99.5 2.1E-13 7.1E-18 139.1 11.7 109 120-228 37-145 (251)
271 2v70_A SLIT-2, SLIT homolog 2 99.4 2.5E-13 8.6E-18 135.7 11.1 114 118-231 57-170 (220)
272 2wfh_A SLIT homolog 2 protein 99.4 3.4E-13 1.2E-17 131.9 11.5 121 108-229 10-141 (193)
273 4b8c_D Glucose-repressible alc 99.4 8E-14 2.7E-18 163.8 7.7 106 122-231 228-333 (727)
274 2je0_A Acidic leucine-rich nuc 99.4 1.2E-13 4E-18 129.0 5.9 112 118-231 17-130 (149)
275 2z81_A CD282 antigen, TOLL-lik 99.4 2.8E-13 9.4E-18 154.2 8.9 125 107-232 3-141 (549)
276 3v47_A TOLL-like receptor 5B a 99.4 6.5E-13 2.2E-17 147.4 10.1 127 106-232 6-147 (455)
277 3g39_A Variable lymphocyte rec 99.4 2.4E-12 8.2E-17 123.1 12.0 107 122-231 13-119 (170)
278 1dce_A Protein (RAB geranylger 99.4 8E-13 2.7E-17 150.7 9.8 108 119-231 442-550 (567)
279 2o6q_A Variable lymphocyte rec 99.4 2.5E-12 8.4E-17 132.6 11.8 120 106-228 3-123 (270)
280 1w8a_A SLIT protein; signaling 99.4 2.3E-12 7.8E-17 125.8 10.9 109 121-232 11-120 (192)
281 4eco_A Uncharacterized protein 99.3 3.4E-13 1.2E-17 156.5 5.6 124 107-231 192-347 (636)
282 2ell_A Acidic leucine-rich nuc 99.3 6.8E-13 2.3E-17 126.4 6.6 112 118-231 24-137 (168)
283 2r9u_A Variable lymphocyte rec 99.3 3.8E-12 1.3E-16 122.2 11.8 107 121-230 15-121 (174)
284 3rfs_A Internalin B, repeat mo 99.3 4.3E-12 1.5E-16 130.9 11.9 115 118-232 85-199 (272)
285 3m19_A Variable lymphocyte rec 99.3 4.9E-12 1.7E-16 128.9 12.2 114 118-231 59-172 (251)
286 2o6s_A Variable lymphocyte rec 99.3 5.2E-12 1.8E-16 124.7 11.7 114 118-231 52-165 (208)
287 2v9t_B SLIT homolog 2 protein 99.3 3.4E-12 1.2E-16 127.5 10.5 112 118-229 56-167 (220)
288 3e6j_A Variable lymphocyte rec 99.3 5.1E-12 1.8E-16 127.0 11.4 113 118-231 64-176 (229)
289 4g8a_A TOLL-like receptor 4; l 99.3 4.9E-12 1.7E-16 146.0 12.6 127 106-232 25-167 (635)
290 2ifg_A High affinity nerve gro 99.3 5.8E-12 2E-16 134.7 12.1 109 108-229 8-118 (347)
291 3rfs_A Internalin B, repeat mo 99.3 8.3E-12 2.8E-16 128.8 12.2 112 118-231 63-174 (272)
292 3vq2_A TLR4, TOLL-like recepto 99.3 8.7E-12 3E-16 143.6 13.2 128 106-233 5-148 (606)
293 2xot_A Amphoterin-induced prot 99.3 8.3E-12 2.8E-16 134.4 10.8 124 108-232 18-153 (361)
294 3oja_A Leucine-rich immune mol 99.3 6.2E-12 2.1E-16 141.0 10.1 121 108-232 109-231 (487)
295 2z62_A TOLL-like receptor 4, v 99.3 2.2E-11 7.5E-16 125.7 13.1 114 119-232 29-143 (276)
296 3v47_A TOLL-like receptor 5B a 99.3 1.1E-11 3.7E-16 137.5 11.5 112 118-229 275-386 (455)
297 4ecn_A Leucine-rich repeat pro 99.3 2E-12 6.7E-17 153.8 5.5 122 108-231 435-589 (876)
298 4ezg_A Putative uncharacterize 99.3 8.6E-12 2.9E-16 122.1 9.2 108 118-228 66-173 (197)
299 3j0a_A TOLL-like receptor 5; m 99.3 5.8E-12 2E-16 151.0 9.2 123 108-230 14-139 (844)
300 3oja_B Anopheles plasmodium-re 99.3 1.6E-11 5.5E-16 141.3 12.5 112 120-231 53-164 (597)
301 2z66_A Variable lymphocyte rec 99.2 1.6E-11 5.5E-16 128.8 10.6 112 118-229 101-214 (306)
302 3cvr_A Invasion plasmid antige 99.2 5E-12 1.7E-16 143.7 6.8 111 106-232 41-157 (571)
303 4ezg_A Putative uncharacterize 99.2 1.3E-11 4.4E-16 120.8 8.9 111 118-232 44-154 (197)
304 2z80_A TOLL-like receptor 2, v 99.2 1.1E-11 3.7E-16 133.0 9.0 124 106-231 28-166 (353)
305 2wfh_A SLIT homolog 2 protein 99.2 4.3E-11 1.5E-15 116.9 12.0 104 121-228 13-116 (193)
306 1wwl_A Monocyte differentiatio 99.2 5.1E-12 1.8E-16 133.1 5.8 110 118-228 95-215 (312)
307 1ozn_A Reticulon 4 receptor; N 99.2 2.9E-11 9.9E-16 125.5 11.2 114 119-232 81-195 (285)
308 2z62_A TOLL-like receptor 4, v 99.2 3.2E-11 1.1E-15 124.5 11.2 114 118-231 52-166 (276)
309 1ozn_A Reticulon 4 receptor; N 99.2 3.1E-11 1.1E-15 125.2 11.0 112 119-230 33-145 (285)
310 2z7x_B TOLL-like receptor 1, v 99.2 2.1E-11 7.1E-16 137.8 9.9 108 118-228 21-129 (520)
311 2je0_A Acidic leucine-rich nuc 99.2 9.7E-12 3.3E-16 115.8 5.9 103 118-222 42-148 (149)
312 3vq2_A TLR4, TOLL-like recepto 99.2 3.2E-11 1.1E-15 138.9 11.5 115 118-232 56-171 (606)
313 2ell_A Acidic leucine-rich nuc 99.2 1.9E-11 6.3E-16 116.3 7.6 108 118-227 49-160 (168)
314 3zyi_A Leucine-rich repeat-con 99.2 4E-11 1.4E-15 133.1 11.5 123 110-232 56-189 (452)
315 2z66_A Variable lymphocyte rec 99.2 2.3E-11 8E-16 127.5 9.1 116 118-233 126-242 (306)
316 2id5_A Lingo-1, leucine rich r 99.2 4.1E-11 1.4E-15 133.8 11.5 124 109-232 12-146 (477)
317 2xot_A Amphoterin-induced prot 99.2 4.9E-11 1.7E-15 128.4 11.1 110 118-228 64-177 (361)
318 2z63_A TOLL-like receptor 4, v 99.2 3.6E-11 1.2E-15 137.2 10.2 115 118-232 396-512 (570)
319 1p9a_G Platelet glycoprotein I 99.2 7.5E-11 2.6E-15 122.9 11.7 108 119-227 78-185 (290)
320 1ziw_A TOLL-like receptor 3; i 99.2 6.7E-11 2.3E-15 138.2 12.0 114 119-232 26-139 (680)
321 2ft3_A Biglycan; proteoglycan, 99.2 8.9E-11 3E-15 124.6 11.8 118 108-228 33-161 (332)
322 3g39_A Variable lymphocyte rec 99.2 5.1E-11 1.8E-15 113.8 8.9 100 108-207 9-119 (170)
323 3a79_B TLR6, VLRB.59, TOLL-lik 99.2 7E-11 2.4E-15 134.9 11.2 108 118-228 52-160 (562)
324 4g8a_A TOLL-like receptor 4; l 99.2 8.1E-11 2.8E-15 135.7 11.8 115 118-232 76-191 (635)
325 3t6q_A CD180 antigen; protein- 99.2 6.3E-11 2.2E-15 136.4 10.6 114 119-232 34-148 (606)
326 2o6q_A Variable lymphocyte rec 99.1 1.6E-10 5.3E-15 119.0 12.2 112 118-229 61-172 (270)
327 2xwt_C Thyrotropin receptor; s 99.1 8.6E-11 3E-15 118.5 10.0 109 118-228 31-145 (239)
328 1wwl_A Monocyte differentiatio 99.1 1E-11 3.4E-16 130.9 3.0 108 122-230 67-189 (312)
329 2z81_A CD282 antigen, TOLL-lik 99.1 3.6E-11 1.2E-15 136.6 7.5 116 118-233 50-167 (549)
330 1p9a_G Platelet glycoprotein I 99.1 1.3E-10 4.3E-15 121.2 11.0 108 119-229 32-139 (290)
331 2o6r_A Variable lymphocyte rec 99.1 2.6E-10 8.9E-15 109.4 12.4 106 121-229 10-115 (177)
332 2z7x_B TOLL-like receptor 1, v 99.1 8.5E-11 2.9E-15 132.7 10.2 110 120-231 304-416 (520)
333 1xku_A Decorin; proteoglycan, 99.1 1.4E-10 4.9E-15 122.9 11.3 119 107-228 30-159 (330)
334 3oja_A Leucine-rich immune mol 99.1 5.5E-11 1.9E-15 133.3 8.4 111 118-232 144-256 (487)
335 3j0a_A TOLL-like receptor 5; m 99.1 8.3E-11 2.8E-15 140.9 10.5 115 118-232 48-166 (844)
336 4b8c_D Glucose-repressible alc 99.1 3.8E-12 1.3E-16 149.6 -1.3 113 118-233 247-360 (727)
337 1a9n_A U2A', U2A'; complex (nu 99.1 1E-10 3.6E-15 112.1 8.4 105 118-228 19-127 (176)
338 3a79_B TLR6, VLRB.59, TOLL-lik 99.1 8E-11 2.7E-15 134.4 8.9 94 139-232 350-446 (562)
339 4glp_A Monocyte differentiatio 99.1 3.7E-11 1.3E-15 126.3 5.1 113 119-231 118-241 (310)
340 3o6n_A APL1; leucine-rich repe 99.1 1.7E-10 5.8E-15 125.3 10.2 111 119-231 46-158 (390)
341 3t6q_A CD180 antigen; protein- 99.1 2.1E-10 7.3E-15 131.9 11.3 116 118-233 400-519 (606)
342 3zyj_A Leucine-rich repeat-con 99.1 3.1E-10 1.1E-14 125.4 11.8 123 110-232 45-178 (440)
343 2z63_A TOLL-like receptor 4, v 99.1 2.8E-10 9.5E-15 129.8 11.5 110 119-228 29-138 (570)
344 1ziw_A TOLL-like receptor 3; i 99.1 2.3E-10 7.7E-15 133.7 10.7 115 118-232 49-163 (680)
345 4glp_A Monocyte differentiatio 99.1 8.5E-11 2.9E-15 123.6 6.1 110 119-228 92-211 (310)
346 3o6n_A APL1; leucine-rich repe 99.1 3.6E-10 1.2E-14 122.7 11.2 111 118-229 69-180 (390)
347 2id5_A Lingo-1, leucine rich r 99.1 2.5E-10 8.4E-15 127.5 10.0 112 118-229 56-167 (477)
348 3tm0_A Aminoglycoside 3'-phosp 99.1 4.4E-10 1.5E-14 115.0 10.6 137 430-581 17-211 (263)
349 1dce_A Protein (RAB geranylger 99.0 2.2E-10 7.7E-15 130.5 9.1 101 118-221 463-567 (567)
350 3zyj_A Leucine-rich repeat-con 99.0 1.3E-09 4.3E-14 120.5 14.7 114 118-232 88-202 (440)
351 1a9n_A U2A', U2A'; complex (nu 99.0 1.2E-10 4.3E-15 111.6 5.6 105 119-227 43-153 (176)
352 1xku_A Decorin; proteoglycan, 99.0 5.8E-10 2E-14 118.2 10.7 111 118-232 145-257 (330)
353 1ds9_A Outer arm dynein; leuci 99.0 2.3E-12 7.8E-17 126.4 -7.7 105 119-228 19-129 (198)
354 3o53_A Protein LRIM1, AGAP0063 99.0 6.2E-10 2.1E-14 117.4 10.1 106 119-227 121-227 (317)
355 3zyi_A Leucine-rich repeat-con 99.0 6.9E-10 2.4E-14 123.1 10.4 112 118-231 171-283 (452)
356 2z80_A TOLL-like receptor 2, v 99.0 3.7E-10 1.3E-14 120.9 7.8 114 118-232 76-192 (353)
357 3oja_B Anopheles plasmodium-re 99.0 5.4E-10 1.8E-14 128.6 9.6 111 119-229 76-186 (597)
358 3o53_A Protein LRIM1, AGAP0063 99.0 4.9E-10 1.7E-14 118.2 8.5 111 118-232 144-256 (317)
359 2xwt_C Thyrotropin receptor; s 99.0 4.2E-10 1.4E-14 113.4 7.6 113 118-233 55-174 (239)
360 2ft3_A Biglycan; proteoglycan, 99.0 3.1E-10 1.1E-14 120.4 6.7 110 118-232 147-258 (332)
361 2r9u_A Variable lymphocyte rec 99.0 9.4E-10 3.2E-14 105.4 9.3 98 108-205 12-120 (174)
362 3cvr_A Invasion plasmid antige 99.0 5.6E-10 1.9E-14 126.8 8.3 98 119-233 121-225 (571)
363 1h6t_A Internalin B; cell adhe 99.0 1.7E-09 5.8E-14 112.6 11.3 106 118-231 68-173 (291)
364 1jl5_A Outer protein YOPM; leu 99.0 1.6E-10 5.5E-15 128.3 3.7 49 118-167 11-59 (454)
365 3bz5_A Internalin-J, INLJ; leu 99.0 1.4E-09 4.8E-14 120.8 11.2 100 118-228 42-141 (457)
366 1xeu_A Internalin C; cellular 98.9 2.2E-09 7.7E-14 110.0 10.8 102 119-229 64-165 (263)
367 1h6t_A Internalin B; cell adhe 98.9 2.1E-09 7.1E-14 112.0 10.7 103 118-228 90-192 (291)
368 1xeu_A Internalin C; cellular 98.9 2.3E-09 7.9E-14 109.9 10.8 103 118-229 41-143 (263)
369 1nd4_A Aminoglycoside 3'-phosp 98.9 1.7E-09 5.7E-14 110.1 9.3 126 437-582 30-213 (264)
370 2ca6_A RAN GTPase-activating p 98.9 2.9E-10 9.8E-15 123.4 3.1 111 118-228 159-288 (386)
371 2ast_B S-phase kinase-associat 98.9 4E-10 1.4E-14 119.5 4.1 111 118-229 70-184 (336)
372 1h6u_A Internalin H; cell adhe 98.9 3E-09 1E-13 111.7 10.7 106 118-231 85-190 (308)
373 1ds9_A Outer arm dynein; leuci 98.9 8.6E-12 3E-16 122.2 -8.5 110 118-232 48-158 (198)
374 1h6u_A Internalin H; cell adhe 98.9 3.8E-09 1.3E-13 110.9 11.2 104 118-229 63-166 (308)
375 1m9s_A Internalin B; cell inva 98.9 2.8E-09 9.7E-14 122.2 11.0 106 118-231 65-170 (605)
376 2ast_B S-phase kinase-associat 98.9 1.4E-10 4.9E-15 123.0 0.2 119 107-229 36-158 (336)
377 1m9s_A Internalin B; cell inva 98.9 2.8E-09 9.7E-14 122.2 10.6 105 117-229 86-190 (605)
378 3dxp_A Putative acyl-COA dehyd 98.9 5.2E-09 1.8E-13 112.3 10.8 142 432-582 43-247 (359)
379 4fmz_A Internalin; leucine ric 98.9 3.1E-09 1.1E-13 113.2 8.3 109 118-232 221-329 (347)
380 4fmz_A Internalin; leucine ric 98.9 5.3E-09 1.8E-13 111.4 10.0 107 118-232 199-305 (347)
381 1o6v_A Internalin A; bacterial 98.8 5.8E-09 2E-13 116.1 10.5 104 118-229 243-346 (466)
382 1jl5_A Outer protein YOPM; leu 98.8 2.3E-09 8E-14 118.9 7.0 103 118-232 257-377 (454)
383 3g06_A SSPH2 (leucine-rich rep 98.8 5.7E-09 1.9E-13 119.9 9.5 58 166-232 221-278 (622)
384 3bz5_A Internalin-J, INLJ; leu 98.8 9.5E-09 3.3E-13 114.0 11.0 99 119-228 128-226 (457)
385 2ca6_A RAN GTPase-activating p 98.8 1.1E-09 3.7E-14 118.8 2.8 113 117-229 121-259 (386)
386 1o6v_A Internalin A; bacterial 98.8 5.4E-09 1.8E-13 116.3 8.4 107 118-232 265-371 (466)
387 2ifg_A High affinity nerve gro 98.8 8.7E-09 3E-13 109.9 9.0 83 145-229 11-95 (347)
388 4ay9_X Follicle-stimulating ho 98.8 3.2E-08 1.1E-12 105.8 12.0 115 108-223 9-137 (350)
389 3rw6_A Nuclear RNA export fact 98.7 5.1E-10 1.7E-14 114.2 -2.1 124 107-232 77-238 (267)
390 3goz_A Leucine-rich repeat-con 98.7 3.3E-09 1.1E-13 114.0 4.1 104 124-227 4-122 (362)
391 3goz_A Leucine-rich repeat-con 98.7 4.6E-09 1.6E-13 112.9 3.4 111 119-229 23-153 (362)
392 3g06_A SSPH2 (leucine-rich rep 98.7 6.6E-09 2.2E-13 119.4 4.7 109 105-228 19-135 (622)
393 3sg8_A APH(2'')-ID; antibiotic 98.6 4.1E-08 1.4E-12 102.6 7.4 178 433-625 26-287 (304)
394 1z7x_W Ribonuclease inhibitor; 98.5 1.2E-08 4E-13 113.0 -0.5 111 118-228 256-384 (461)
395 4ay9_X Follicle-stimulating ho 98.5 2.3E-07 7.8E-12 99.0 9.1 111 114-231 8-121 (350)
396 3rw6_A Nuclear RNA export fact 98.4 5.2E-08 1.8E-12 99.3 2.1 80 139-220 167-257 (267)
397 1z7x_W Ribonuclease inhibitor; 98.4 2.5E-08 8.4E-13 110.5 -0.7 115 118-232 227-359 (461)
398 3un9_A NLR family member X1; l 98.4 1.1E-07 3.8E-12 102.4 4.2 111 118-228 101-225 (372)
399 3r70_A Aminoglycoside phosphot 98.3 1.5E-06 5.1E-11 91.5 10.8 130 432-582 42-236 (320)
400 3un9_A NLR family member X1; l 98.2 3E-07 1E-11 99.0 1.9 110 119-228 127-253 (372)
401 3d1u_A Putative fructosamine-3 98.2 2.1E-06 7.1E-11 89.0 7.8 75 432-517 20-97 (288)
402 3ogk_B Coronatine-insensitive 98.2 4.1E-07 1.4E-11 104.0 1.9 110 119-228 379-502 (592)
403 3tdw_A Gentamicin resistance p 98.1 9.7E-06 3.3E-10 84.7 11.8 134 433-582 25-223 (306)
404 1io0_A Tropomodulin; LRR prote 98.1 9.3E-07 3.2E-11 85.2 2.1 110 118-227 36-164 (185)
405 4gkh_A Aminoglycoside 3'-phosp 98.0 2.3E-05 8E-10 79.8 12.1 124 442-581 40-221 (272)
406 3ovc_A Hygromycin-B 4-O-kinase 97.9 1.7E-05 6E-10 84.8 9.2 138 433-582 47-242 (362)
407 3ats_A Putative uncharacterize 97.8 3.7E-05 1.3E-09 81.8 8.8 84 433-518 26-121 (357)
408 3ogk_B Coronatine-insensitive 97.8 1.6E-05 5.5E-10 90.7 6.2 109 119-229 165-308 (592)
409 2p1m_B Transport inhibitor res 97.7 5.6E-06 1.9E-10 94.5 -0.4 110 119-229 373-496 (594)
410 1io0_A Tropomodulin; LRR prote 97.6 2.3E-05 7.8E-10 75.4 3.4 96 134-229 28-138 (185)
411 2p1m_B Transport inhibitor res 97.6 2.6E-05 8.9E-10 88.9 4.4 106 118-225 105-222 (594)
412 2olc_A MTR kinase, methylthior 97.5 0.00021 7.2E-09 77.2 9.8 80 432-515 35-120 (397)
413 2q83_A YTAA protein; 2635576, 97.5 0.00069 2.4E-08 71.1 12.4 30 552-581 221-250 (346)
414 2ra8_A Uncharacterized protein 97.4 3.2E-05 1.1E-09 82.6 1.1 109 118-229 172-294 (362)
415 3f7w_A Putative fructosamine-3 97.3 0.00033 1.1E-08 72.1 7.8 75 432-517 20-97 (288)
416 3jr1_A Putative fructosamine-3 97.3 0.00083 2.8E-08 70.0 10.7 135 433-579 42-232 (312)
417 3sb4_A Hypothetical leucine ri 96.9 0.0016 5.3E-08 68.4 8.4 83 140-227 224-310 (329)
418 2ra8_A Uncharacterized protein 96.9 0.00056 1.9E-08 72.9 4.3 110 118-230 139-268 (362)
419 3dxq_A Choline/ethanolamine ki 96.7 0.0025 8.6E-08 65.8 7.5 29 553-582 173-201 (301)
420 3csv_A Aminoglycoside phosphot 96.6 0.0069 2.3E-07 63.4 10.4 30 553-582 183-216 (333)
421 2pyw_A Uncharacterized protein 96.5 0.008 2.7E-07 65.3 10.0 30 553-583 232-261 (420)
422 3sb4_A Hypothetical leucine ri 96.4 0.0052 1.8E-07 64.3 7.6 83 141-227 201-286 (329)
423 2ppq_A HSK, HK, homoserine kin 96.2 0.01 3.5E-07 61.6 8.8 157 415-581 6-215 (322)
424 3feg_A Choline/ethanolamine ki 96.0 0.018 6E-07 61.6 9.2 136 434-581 57-252 (379)
425 1zyl_A Hypothetical protein YI 96.0 0.03 1E-06 58.2 10.8 158 414-582 9-222 (328)
426 2qg7_A Ethanolamine kinase PV0 95.9 0.034 1.2E-06 60.9 11.4 73 433-517 114-188 (458)
427 1nw1_A Choline kinase (49.2 KD 95.8 0.022 7.4E-07 62.1 9.4 72 433-517 79-159 (429)
428 3e4g_A ATP synthase subunit S, 95.8 0.0056 1.9E-07 57.7 3.9 33 191-223 115-148 (176)
429 3rfe_A Platelet glycoprotein I 95.7 0.013 4.6E-07 52.3 5.8 16 211-226 52-67 (130)
430 3e4g_A ATP synthase subunit S, 95.7 0.0045 1.5E-07 58.4 2.6 83 119-201 62-150 (176)
431 3c5i_A Choline kinase; choline 95.6 0.018 6.1E-07 61.2 7.5 27 554-581 213-239 (369)
432 1pgv_A TMD-1, tropomodulin TMD 95.2 0.011 3.6E-07 56.9 3.7 108 118-225 41-168 (197)
433 3rfe_A Platelet glycoprotein I 95.0 0.045 1.5E-06 48.8 7.0 56 145-203 11-68 (130)
434 3i1a_A Spectinomycin phosphotr 94.9 0.091 3.1E-06 55.1 10.3 30 553-582 206-235 (339)
435 2yle_A Protein spire homolog 1 94.5 0.14 4.8E-06 49.6 9.3 98 515-620 33-131 (229)
436 4fdw_A Leucine rich hypothetic 93.2 0.18 6.3E-06 54.1 8.4 78 142-222 248-331 (401)
437 1pgv_A TMD-1, tropomodulin TMD 93.0 0.058 2E-06 51.7 3.6 89 136-224 35-136 (197)
438 3f2s_A CK, chetk-alpha, cholin 92.8 0.29 9.9E-06 52.4 9.2 28 554-581 245-278 (401)
439 4fdw_A Leucine rich hypothetic 90.4 0.6 2.1E-05 50.0 8.5 103 119-227 249-358 (401)
440 3mes_A Choline kinase; malaria 90.2 0.58 2E-05 50.5 8.2 27 554-581 263-289 (424)
441 2ks1_B Epidermal growth factor 87.3 0.42 1.4E-05 33.4 2.9 28 364-391 12-40 (44)
442 3g15_A CK, chetk-alpha, cholin 87.1 1.9 6.6E-05 46.0 9.7 28 555-582 246-279 (401)
443 2l2t_A Receptor tyrosine-prote 86.3 0.42 1.4E-05 33.3 2.4 29 364-392 11-40 (44)
444 2jwa_A Receptor tyrosine-prote 81.6 0.91 3.1E-05 31.6 2.5 26 365-390 14-39 (44)
445 4ann_A ESSB; membrane protein, 80.0 4.6 0.00016 38.9 7.8 117 485-626 42-158 (215)
446 2k9y_A Ephrin type-A receptor 75.6 1.1 3.7E-05 30.8 1.5 26 364-389 14-40 (41)
447 3cxl_A N-chimerin; SH2, RHO-GA 74.7 0.4 1.4E-05 52.5 -1.5 62 432-499 147-215 (463)
448 4ano_A ESSB; membrane protein, 72.3 10 0.00035 36.5 8.0 114 486-626 48-163 (219)
449 4gt6_A Cell surface protein; l 71.1 12 0.00041 39.4 9.1 82 137-224 260-344 (394)
450 4fs7_A Uncharacterized protein 70.1 7.9 0.00027 40.8 7.4 80 138-224 272-353 (394)
451 4gt6_A Cell surface protein; l 69.6 4.7 0.00016 42.6 5.6 83 137-225 283-368 (394)
452 4h09_A Hypothetical leucine ri 68.1 12 0.00041 39.0 8.3 84 137-224 235-320 (379)
453 4fs7_A Uncharacterized protein 60.2 8.7 0.0003 40.5 5.4 82 137-224 292-376 (394)
454 4h09_A Hypothetical leucine ri 55.3 30 0.001 35.8 8.6 86 137-227 212-299 (379)
455 1iij_A ERBB-2 receptor protein 52.3 3.4 0.00012 27.2 0.3 7 365-371 10-16 (35)
456 2k1k_A Ephrin type-A receptor 38.8 20 0.00068 24.1 2.4 9 380-388 29-37 (38)
No 1
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=2.8e-52 Score=438.36 Aligned_cols=248 Identities=22% Similarity=0.370 Sum_probs=206.6
Q ss_pred hhhCcCCCCceeEEEEEEec------CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCc
Q 004979 430 NIIGSFSDGTVGTVYKGTLS------SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPF 503 (721)
Q Consensus 430 ~ii~~lg~G~~g~Vyk~~~~------~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~ 503 (721)
.+.++||+|+||+||+|++. ++..||||+++... ....++|.+|+++|++++|||||+++|+|.+.+
T Consensus 16 ~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~-----~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~-- 88 (299)
T 4asz_A 16 VLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS-----DNARKDFHREAELLTNLQHEHIVKFYGVCVEGD-- 88 (299)
T ss_dssp EEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCC-----HHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS--
T ss_pred EEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCC-----hHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCC--
Confidence 45678999999999999864 46789999886432 334578999999999999999999999999877
Q ss_pred eEEEEEecCCCCChhhhhhhc-----------cCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCc
Q 004979 504 TRMMVFEYSPNGSLFEHLHIQ-----------EAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYA 572 (721)
Q Consensus 504 ~~~lV~Ey~~~GsL~~~l~~~-----------~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~ 572 (721)
..+||||||++|+|.++|+.. ....++|.+++.|+.|||.||+|||+++ ||||||||+||||++++.
T Consensus 89 ~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~--iiHRDlKp~NILl~~~~~ 166 (299)
T 4asz_A 89 PLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQH--FVHRDLATRNCLVGENLL 166 (299)
T ss_dssp SEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEECGGGC
T ss_pred EEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCccCHhhEEECCCCc
Confidence 579999999999999999743 2357999999999999999999999988 999999999999999999
Q ss_pred EEEeccCCCCCCC-----------CCCccccchhhcccCCCCCCccHHHHHHHHHHHHh-CCCcccCCCCCHHHHHHHHh
Q 004979 573 AKISDFSFWNNTT-----------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYL 640 (721)
Q Consensus 573 ~kL~DFGla~~~~-----------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~Ellt-G~~P~~~~~~~~~~~~~~~~ 640 (721)
+||+|||+++... .++..|+|||.+.+..|+.++|||||||+||||+| |+.||.. .+..+....+.
T Consensus 167 ~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~--~~~~~~~~~i~ 244 (299)
T 4asz_A 167 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQ--LSNNEVIECIT 244 (299)
T ss_dssp EEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTT--SCHHHHHHHHH
T ss_pred EEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCC--CCHHHHHHHHH
Confidence 9999999986321 24557999999999999999999999999999999 9999964 33445555554
Q ss_pred hcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCC
Q 004979 641 KGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEP 698 (721)
Q Consensus 641 ~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 698 (721)
.+... ..+..+++++.+||.+||+.||++||||.||++.|+++.+..|
T Consensus 245 ~~~~~----------~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~~p 292 (299)
T 4asz_A 245 QGRVL----------QRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKASP 292 (299)
T ss_dssp HTCCC----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSC
T ss_pred cCCCC----------CCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhcCC
Confidence 44221 1234566789999999999999999999999999999987654
No 2
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=9.5e-52 Score=440.20 Aligned_cols=247 Identities=22% Similarity=0.375 Sum_probs=203.9
Q ss_pred hhhCcCCCCceeEEEEEEec------CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCc
Q 004979 430 NIIGSFSDGTVGTVYKGTLS------SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPF 503 (721)
Q Consensus 430 ~ii~~lg~G~~g~Vyk~~~~------~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~ 503 (721)
.+.++||+|+||+||+|++. ++..||||++.... ....++|.+|+++|++++|||||+++|+|.+.+
T Consensus 44 ~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~-----~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~-- 116 (329)
T 4aoj_A 44 VLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS-----ESARQDFQREAELLTMLQHQHIVRFFGVCTEGR-- 116 (329)
T ss_dssp EEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCS-----HHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS--
T ss_pred EEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCC-----HHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC--
Confidence 34567899999999999864 46789999986432 334578999999999999999999999999877
Q ss_pred eEEEEEecCCCCChhhhhhhcc-------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCC
Q 004979 504 TRMMVFEYSPNGSLFEHLHIQE-------------AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTED 570 (721)
Q Consensus 504 ~~~lV~Ey~~~GsL~~~l~~~~-------------~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~ 570 (721)
..+||||||++|+|.++++... ...++|.+++.|+.|||.||+|||+++ ||||||||+||||+++
T Consensus 117 ~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~--iiHRDLKp~NILl~~~ 194 (329)
T 4aoj_A 117 PLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH--FVHRDLATRNCLVGQG 194 (329)
T ss_dssp SEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEEETT
T ss_pred EEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCC--eecccccHhhEEECCC
Confidence 5799999999999999997432 246999999999999999999999988 9999999999999999
Q ss_pred CcEEEeccCCCCCC-----------CCCCccccchhhcccCCCCCCccHHHHHHHHHHHHh-CCCcccCCCCCHHHHHHH
Q 004979 571 YAAKISDFSFWNNT-----------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASE 638 (721)
Q Consensus 571 ~~~kL~DFGla~~~-----------~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~Ellt-G~~P~~~~~~~~~~~~~~ 638 (721)
+++||+|||+++.. ..++..|||||.+.+..|+.++|||||||+||||+| |+.||... +..+.+..
T Consensus 195 ~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~--~~~~~~~~ 272 (329)
T 4aoj_A 195 LVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQL--SNTEAIDC 272 (329)
T ss_dssp TEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSS--CHHHHHHH
T ss_pred CcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCC--CHHHHHHH
Confidence 99999999998743 124557999999999999999999999999999999 99999633 34444444
Q ss_pred HhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcC
Q 004979 639 YLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAME 697 (721)
Q Consensus 639 ~~~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 697 (721)
+..+... ..+..+++++.+||.+||+.||++||||.||++.|+.+.+..
T Consensus 273 i~~g~~~----------~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~p 321 (329)
T 4aoj_A 273 ITQGREL----------ERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAP 321 (329)
T ss_dssp HHHTCCC----------CCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHSC
T ss_pred HHcCCCC----------CCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhCC
Confidence 4444221 123445678999999999999999999999999999998754
No 3
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=1.4e-51 Score=433.27 Aligned_cols=251 Identities=25% Similarity=0.449 Sum_probs=204.0
Q ss_pred hhhCcCCCCceeEEEEEEecCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEEEEE
Q 004979 430 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 509 (721)
Q Consensus 430 ~ii~~lg~G~~g~Vyk~~~~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~lV~ 509 (721)
++.++||+|+||+||+|+++. .||||+++.... .....+.|.+|+++|++++|||||+++|+|.++ ..+|||
T Consensus 39 ~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~---~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~---~~~iVm 110 (307)
T 3omv_A 39 MLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDP---TPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKD---NLAIVT 110 (307)
T ss_dssp CEEEECCCCSSSEEEEEESSS--EEEEEECCCSSC---CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS---SCEEEE
T ss_pred EEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCC---CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEECC---eEEEEE
Confidence 456789999999999999764 589998864322 234467899999999999999999999998654 358999
Q ss_pred ecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCC-----
Q 004979 510 EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT----- 584 (721)
Q Consensus 510 Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~----- 584 (721)
|||++|+|.++|+.. ...++|.+++.|+.|||.||+|||+++ ||||||||+||||++++++||+|||+++..
T Consensus 111 Ey~~gGsL~~~l~~~-~~~l~~~~~~~i~~qia~gL~yLH~~~--IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~ 187 (307)
T 3omv_A 111 QWCEGSSLYKHLHVQ-ETKFQMFQLIDIARQTAQGMDYLHAKN--IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSG 187 (307)
T ss_dssp ECCSSCBHHHHHHTS-CCCCCHHHHHHHHHHHHHHHHHHHHTT--CBCSCCCSSSEEEETTEEEEECCCSSCBC------
T ss_pred EcCCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC--ccCCccCHHHEEECCCCcEEEeeccCceecccCCc
Confidence 999999999999643 356999999999999999999999987 999999999999999999999999998642
Q ss_pred ------CCCCccccchhhcc---cCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccc
Q 004979 585 ------TAAKTGSAAMELLE---TSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLK 655 (721)
Q Consensus 585 ------~~~~~~~~apE~~~---~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 655 (721)
..++..|||||++. ...|+.++|||||||+||||+||+.||...+. ...+...+.... ..|.+.
T Consensus 188 ~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~--~~~~~~~~~~~~-----~~p~~~ 260 (307)
T 3omv_A 188 SQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINN--RDQIIFMVGRGY-----ASPDLS 260 (307)
T ss_dssp ------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCC--HHHHHHHHHTTC-----CCCCST
T ss_pred ceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCCh--HHHHHHHHhcCC-----CCCCcc
Confidence 23567899999985 34699999999999999999999999964322 222222222211 122333
Q ss_pred cccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCC
Q 004979 656 SFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEP 698 (721)
Q Consensus 656 ~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 698 (721)
..+..++.++.+||.+||+.||++||||.||++.|+.++...+
T Consensus 261 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~lp 303 (307)
T 3omv_A 261 KLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLP 303 (307)
T ss_dssp TSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTCC
T ss_pred cccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccCC
Confidence 3445667889999999999999999999999999999876543
No 4
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=3.1e-52 Score=439.82 Aligned_cols=244 Identities=20% Similarity=0.376 Sum_probs=202.7
Q ss_pred hhhCcCCCCceeEEEEEEec------CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCc
Q 004979 430 NIIGSFSDGTVGTVYKGTLS------SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPF 503 (721)
Q Consensus 430 ~ii~~lg~G~~g~Vyk~~~~------~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~ 503 (721)
+++++||+|+||+||+|++. +++.||||++..... ....++|.+|+.+|++++|||||+++|+|.+.+
T Consensus 29 ~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~----~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~-- 102 (308)
T 4gt4_A 29 RFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAE----GPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQ-- 102 (308)
T ss_dssp EEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CC----C-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--
T ss_pred eEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccC----hHHHHHHHHHHHHHHhCCCCCCCCcceEEEECC--
Confidence 45778999999999999873 467899999864322 223468999999999999999999999999877
Q ss_pred eEEEEEecCCCCChhhhhhhcc--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCC
Q 004979 504 TRMMVFEYSPNGSLFEHLHIQE--------------AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTE 569 (721)
Q Consensus 504 ~~~lV~Ey~~~GsL~~~l~~~~--------------~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~ 569 (721)
..+||||||++|+|.++|+.+. ...++|.++++|+.|||.||+|||+++ ||||||||+||||++
T Consensus 103 ~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~--iiHRDLK~~NILl~~ 180 (308)
T 4gt4_A 103 PLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH--VVHKDLATRNVLVYD 180 (308)
T ss_dssp SCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEECG
T ss_pred EEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC--CCCCCccccceEECC
Confidence 5699999999999999996432 246999999999999999999999988 999999999999999
Q ss_pred CCcEEEeccCCCCCC-----------CCCCccccchhhcccCCCCCCccHHHHHHHHHHHHh-CCCcccCCCCCHHHHHH
Q 004979 570 DYAAKISDFSFWNNT-----------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWAS 637 (721)
Q Consensus 570 ~~~~kL~DFGla~~~-----------~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~Ellt-G~~P~~~~~~~~~~~~~ 637 (721)
++++||+|||+++.. ..++..|+|||.+.+..|+.++|||||||+||||+| |+.||... +..+.+.
T Consensus 181 ~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~--~~~~~~~ 258 (308)
T 4gt4_A 181 KLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGY--SNQDVVE 258 (308)
T ss_dssp GGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTC--CHHHHHH
T ss_pred CCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCC--CHHHHHH
Confidence 999999999998642 124457999999999999999999999999999999 89999643 3444444
Q ss_pred HHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHh
Q 004979 638 EYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 693 (721)
Q Consensus 638 ~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~i 693 (721)
.+..+.. ...++.++.++.+||.+||+.||++||||.||++.|+.+
T Consensus 259 ~i~~~~~----------~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 259 MIRNRQV----------LPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp HHHTTCC----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred HHHcCCC----------CCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 4443321 122345667899999999999999999999999999865
No 5
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=6.3e-50 Score=426.76 Aligned_cols=241 Identities=20% Similarity=0.373 Sum_probs=202.1
Q ss_pred hhhhCcCCCCceeEEEEEEe-cCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEEE
Q 004979 429 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 507 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~-~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~l 507 (721)
|++++.||+|+||+||+|+. .+++.||||++...... ....+.|.+|+++|++++|||||++++++.+.+ ..||
T Consensus 26 Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~---~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~--~~yi 100 (350)
T 4b9d_A 26 YVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMS---SKEREESRREVAVLANMKHPNIVQYRESFEENG--SLYI 100 (350)
T ss_dssp EEEEEEC------CEEEEEETTTCCEEEEEEEECTTSC---HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEE
T ss_pred eEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCC---HHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECC--EEEE
Confidence 47889999999999999996 46899999998754322 334578999999999999999999999999877 7899
Q ss_pred EEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCCC--
Q 004979 508 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT-- 585 (721)
Q Consensus 508 V~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~~-- 585 (721)
|||||++|+|.++|..+....+++.+.+.|+.||+.||+|||+++ ||||||||+||||++++.+||+|||+++...
T Consensus 101 VmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~--IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 178 (350)
T 4b9d_A 101 VMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRK--ILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST 178 (350)
T ss_dssp EEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT--CEETTCCGGGEEECTTCCEEECSTTEESCCCHH
T ss_pred EEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeeccCCHHHEEECCCCCEEEcccccceeecCC
Confidence 999999999999997666667899999999999999999999998 9999999999999999999999999997543
Q ss_pred -------CCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004979 586 -------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 658 (721)
Q Consensus 586 -------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 658 (721)
.++..|+|||++.+..|+.++||||+||+||||+||+.||.. .+..+.+..+..+..+ ..+
T Consensus 179 ~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~--~~~~~~~~~i~~~~~~----------~~~ 246 (350)
T 4b9d_A 179 VELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEA--GSMKNLVLKIISGSFP----------PVS 246 (350)
T ss_dssp HHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCC--SSHHHHHHHHHHTCCC----------CCC
T ss_pred cccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCC--cCHHHHHHHHHcCCCC----------CCC
Confidence 267789999999999999999999999999999999999963 3455666666554322 112
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004979 659 ENVLEELLVVIKNCVHPDPKQRPSMRGIAA 688 (721)
Q Consensus 659 ~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 688 (721)
..++.++.+||.+||+.||++|||+.|+++
T Consensus 247 ~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 247 LHYSYDLRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 345578899999999999999999999986
No 6
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=2.6e-49 Score=412.96 Aligned_cols=243 Identities=23% Similarity=0.342 Sum_probs=196.8
Q ss_pred hhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecC--CCceEE
Q 004979 430 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEED--EPFTRM 506 (721)
Q Consensus 430 ~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~--~~~~~~ 506 (721)
++..+||+|+||+||+|+.. ++..||+|++..... .....+.|.+|+++|++++|||||++++++.+. +....|
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~---~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~ 105 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKL---TKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIV 105 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS---CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhC---CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEE
Confidence 44456899999999999964 688999999875432 233457899999999999999999999998652 222579
Q ss_pred EEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeC-CCCcEEEeccCCCCCC-
Q 004979 507 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLT-EDYAAKISDFSFWNNT- 584 (721)
Q Consensus 507 lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~-~~~~~kL~DFGla~~~- 584 (721)
||||||++|+|.++++. ...+++..+..|+.||+.||+|||+++++||||||||+||||+ +++.+||+|||+++..
T Consensus 106 lvmEy~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~ 183 (290)
T 3fpq_A 106 LVTELMTSGTLKTYLKR--FKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR 183 (290)
T ss_dssp EEEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred EEEeCCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCC
Confidence 99999999999999964 3569999999999999999999999888899999999999998 4799999999998632
Q ss_pred ------CCCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004979 585 ------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 658 (721)
Q Consensus 585 ------~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 658 (721)
..++..|||||++.+ .|+.++|||||||+||||+||+.||... .+.......+..+..+. .++
T Consensus 184 ~~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~-~~~~~~~~~i~~~~~~~---------~~~ 252 (290)
T 3fpq_A 184 ASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSEC-QNAAQIYRRVTSGVKPA---------SFD 252 (290)
T ss_dssp TTSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTC-SSHHHHHHHHTTTCCCG---------GGG
T ss_pred CCccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCC-CcHHHHHHHHHcCCCCC---------CCC
Confidence 236778999998865 6999999999999999999999999633 23334444433332111 122
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004979 659 ENVLEELLVVIKNCVHPDPKQRPSMRGIAA 688 (721)
Q Consensus 659 ~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 688 (721)
...++++.+|+.+||+.||++|||+.|+++
T Consensus 253 ~~~~~~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 253 KVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp GCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 234467899999999999999999999975
No 7
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=1.4e-49 Score=422.21 Aligned_cols=250 Identities=16% Similarity=0.152 Sum_probs=208.1
Q ss_pred hhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEEEE
Q 004979 430 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 508 (721)
Q Consensus 430 ~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~lV 508 (721)
++.++||+|+||+||+|+.. +|+.||||++.... .+.+|+++|++++|||||++++++.+.+ ..|||
T Consensus 61 ~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~----------~~~~E~~il~~l~HpnIV~l~~~~~~~~--~~~iv 128 (336)
T 4g3f_A 61 THQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEV----------FRVEELVACAGLSSPRIVPLYGAVREGP--WVNIF 128 (336)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT----------CCTHHHHTTTTCCCTTBCCEEEEEEETT--EEEEE
T ss_pred EeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHH----------hHHHHHHHHHhCCCCCCCcEEEEEEECC--EEEEE
Confidence 56678999999999999964 68999999986432 1247999999999999999999999877 77999
Q ss_pred EecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCC-cEEEeccCCCCCC---
Q 004979 509 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDY-AAKISDFSFWNNT--- 584 (721)
Q Consensus 509 ~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~-~~kL~DFGla~~~--- 584 (721)
||||++|+|.++|+.. ..+++..+..|+.||+.||+|||+++ ||||||||+||||+.++ .+||+|||+++..
T Consensus 129 mEy~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~aL~ylH~~~--IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~ 204 (336)
T 4g3f_A 129 MELLEGGSLGQLIKQM--GCLPEDRALYYLGQALEGLEYLHTRR--ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPD 204 (336)
T ss_dssp ECCCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTTT--EECSCCCGGGEEECTTSCCEEECCCTTCEEC---
T ss_pred EeccCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC--ceecccCHHHEEEeCCCCEEEEeeCCCCeEccCC
Confidence 9999999999999643 46999999999999999999999998 99999999999999987 6999999998632
Q ss_pred -----------CCCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCccccCCc
Q 004979 585 -----------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPT 653 (721)
Q Consensus 585 -----------~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 653 (721)
..++..|||||++.+..|+.++|||||||++|||+||+.||...... +....+..+..+.
T Consensus 205 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~--~~~~~i~~~~~~~------- 275 (336)
T 4g3f_A 205 GLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRG--PLCLKIASEPPPI------- 275 (336)
T ss_dssp ---------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCS--CCHHHHHHSCCGG-------
T ss_pred CcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHH--HHHHHHHcCCCCc-------
Confidence 23677899999999999999999999999999999999999754322 1222333332211
Q ss_pred cccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCCCCCCCCC
Q 004979 654 LKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPDGATPKL 705 (721)
Q Consensus 654 l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~p~~ 705 (721)
...++.++.++.+++.+||+.||++|||+.|+++.|.........-.+|..
T Consensus 276 -~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~~l~hPw~ 326 (336)
T 4g3f_A 276 -REIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVGGLKSPWK 326 (336)
T ss_dssp -GGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTTSSCSCSS
T ss_pred -hhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhhhccCCCc
Confidence 123445677899999999999999999999999999888776665556654
No 8
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=7.8e-50 Score=419.21 Aligned_cols=258 Identities=19% Similarity=0.282 Sum_probs=215.5
Q ss_pred hhhhCcCCCCceeEEEEEEe-cCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEEE
Q 004979 429 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 507 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~-~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~l 507 (721)
|++++.||+|+||+||+|+. .+++.||||++....... ....+.+.+|+++|++++|||||++++++.+.+ ..||
T Consensus 34 y~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~--~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~--~~yi 109 (311)
T 4aw0_A 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIK--ENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDE--KLYF 109 (311)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHH--TTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEE
T ss_pred cEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCC--HHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC--EEEE
Confidence 37888999999999999995 478999999987543221 223467999999999999999999999999877 7899
Q ss_pred EEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCC---
Q 004979 508 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT--- 584 (721)
Q Consensus 508 V~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~--- 584 (721)
|||||++|+|.+++.. ...+++.....|+.||+.||+|||+++ ||||||||+|||+++++.+||+|||+++..
T Consensus 110 vmEy~~gG~L~~~i~~--~~~l~e~~~~~~~~qi~~al~ylH~~~--IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~ 185 (311)
T 4aw0_A 110 GLSYAKNGELLKYIRK--IGSFDETCTRFYTAEIVSALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 185 (311)
T ss_dssp EECCCTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EEecCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC--CccCCCCHHHeEEcCCCCEEEEEcCCceecCCC
Confidence 9999999999999964 356999999999999999999999998 999999999999999999999999998632
Q ss_pred --------CCCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccc
Q 004979 585 --------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKS 656 (721)
Q Consensus 585 --------~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 656 (721)
..|+..|+|||++.+..|+.++||||+||++|||+||+.||.. .+..+....+..+...+
T Consensus 186 ~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~--~~~~~~~~~i~~~~~~~---------- 253 (311)
T 4aw0_A 186 SKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA--GNEGLIFAKIIKLEYDF---------- 253 (311)
T ss_dssp TTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCC--SSHHHHHHHHHHTCCCC----------
T ss_pred CCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCC--CCHHHHHHHHHcCCCCC----------
Confidence 2367789999999999999999999999999999999999964 34555566666553322
Q ss_pred ccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCChhHHHHHH
Q 004979 657 FQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPDGATPKLSPLWWAELE 714 (721)
Q Consensus 657 ~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~p~~~~~~~~~l~ 714 (721)
++..++++.+|+.+||+.||++|||++|++.. ..+ ..+|++..++|+.|+
T Consensus 254 -p~~~s~~~~dli~~lL~~dp~~R~t~~e~~~~-~~i------~~Hp~F~~idw~~l~ 303 (311)
T 4aw0_A 254 -PEKFFPKARDLVEKLLVLDATKRLGCEEMEGY-GPL------KAHPFFESVTWENLH 303 (311)
T ss_dssp -CTTCCHHHHHHHHHHSCSSGGGSTTSGGGTCH-HHH------HTSGGGTTCCCTTGG
T ss_pred -CcccCHHHHHHHHHHccCCHhHCcChHHHcCC-HHH------HCCCCcCCCCHHHhc
Confidence 23345678999999999999999999986432 111 237899999998874
No 9
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=1.8e-49 Score=426.18 Aligned_cols=251 Identities=21% Similarity=0.348 Sum_probs=203.2
Q ss_pred hhhCcCCCCceeEEEEEEecC------CcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCC-CccceEeEEEecCCC
Q 004979 430 NIIGSFSDGTVGTVYKGTLSS------GVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNH-KNFVNLIGYCEEDEP 502 (721)
Q Consensus 430 ~ii~~lg~G~~g~Vyk~~~~~------~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H-~nIv~l~g~~~~~~~ 502 (721)
++.+.||+|+||+||+|++.. ++.||||++.... .....+.|.+|+++|.+++| ||||+++|+|.+.+.
T Consensus 67 ~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~----~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~ 142 (353)
T 4ase_A 67 KLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA----THSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 142 (353)
T ss_dssp EEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTS
T ss_pred EEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEcccc----ChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCC
Confidence 677889999999999998642 3578998876432 12345689999999999965 899999999976432
Q ss_pred ceEEEEEecCCCCChhhhhhhcc--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeC
Q 004979 503 FTRMMVFEYSPNGSLFEHLHIQE--------------AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLT 568 (721)
Q Consensus 503 ~~~~lV~Ey~~~GsL~~~l~~~~--------------~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~ 568 (721)
..+||||||++|+|.++|+... ...++|..++.|+.|||.||+|||+++ ||||||||+|||++
T Consensus 143 -~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~--iiHRDLK~~NILl~ 219 (353)
T 4ase_A 143 -PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLS 219 (353)
T ss_dssp -CCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEEC
T ss_pred -EEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCC--eecCccCccceeeC
Confidence 4689999999999999997432 245899999999999999999999988 99999999999999
Q ss_pred CCCcEEEeccCCCCCCCC-----------CCccccchhhcccCCCCCCccHHHHHHHHHHHHh-CCCcccCCCCCHHHHH
Q 004979 569 EDYAAKISDFSFWNNTTA-----------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWA 636 (721)
Q Consensus 569 ~~~~~kL~DFGla~~~~~-----------~~~~~~apE~~~~~~~s~ksDVwSfGvvL~Ellt-G~~P~~~~~~~~~~~~ 636 (721)
+++.+||+|||+++.... ++..|||||.+.+..|+.++|||||||+||||+| |+.||...... ....
T Consensus 220 ~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~-~~~~ 298 (353)
T 4ase_A 220 EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-EEFC 298 (353)
T ss_dssp GGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS-HHHH
T ss_pred CCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHH-HHHH
Confidence 999999999999975422 2346999999999999999999999999999998 99999744322 2222
Q ss_pred HHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCC
Q 004979 637 SEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEP 698 (721)
Q Consensus 637 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 698 (721)
..+..+.. . ..++.+++++.++|.+||+.||++||||.||++.|+++.+...
T Consensus 299 ~~i~~g~~-~---------~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~~~ 350 (353)
T 4ase_A 299 RRLKEGTR-M---------RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 350 (353)
T ss_dssp HHHHHTCC-C---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTC
T ss_pred HHHHcCCC-C---------CCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHHhh
Confidence 22222211 1 1233456789999999999999999999999999999876543
No 10
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=5e-49 Score=419.18 Aligned_cols=238 Identities=21% Similarity=0.284 Sum_probs=200.5
Q ss_pred hhhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEEE
Q 004979 429 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 507 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~l 507 (721)
++++++||+|+||+||+|+.. +|+.||||++....... .+.+.+|+++|++++|||||++++++.+.+ ..||
T Consensus 76 y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~-----~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~--~~~i 148 (346)
T 4fih_A 76 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR-----RELLFNEVVIMRDYQHENVVEMYNSYLVGD--ELWV 148 (346)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSS-----GGGGHHHHHHHHHCCCTTBCCEEEEEEETT--EEEE
T ss_pred cEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhH-----HHHHHHHHHHHHhCCCCCCCcEEEEEEECC--EEEE
Confidence 577889999999999999965 68999999987543222 246889999999999999999999999887 7899
Q ss_pred EEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCC---
Q 004979 508 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT--- 584 (721)
Q Consensus 508 V~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~--- 584 (721)
|||||++|+|.+++.. ..+++..+..|+.||+.||+|||+++ ||||||||+||||+.++.+||+|||+++..
T Consensus 149 vmEy~~gg~L~~~l~~---~~l~e~~~~~~~~qi~~aL~ylH~~~--IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 223 (346)
T 4fih_A 149 VMEFLEGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQG--VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE 223 (346)
T ss_dssp EECCCTTEEHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTCCEEECCCTTCEECCSS
T ss_pred EEeCCCCCcHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC--cccccCCHHHEEECCCCCEEEecCcCceecCCC
Confidence 9999999999999863 45999999999999999999999998 999999999999999999999999998532
Q ss_pred ------CCCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004979 585 ------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 658 (721)
Q Consensus 585 ------~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 658 (721)
..++..|+|||++.+..|+.++||||+||++|||+||+.||... +..+....+.....+. + ...
T Consensus 224 ~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~--~~~~~~~~i~~~~~~~-------~-~~~ 293 (346)
T 4fih_A 224 VPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE--PPLKAMKMIRDNLPPR-------L-KNL 293 (346)
T ss_dssp SCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTS--CHHHHHHHHHHSSCCC-------C-SCG
T ss_pred CCcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc--CHHHHHHHHHcCCCCC-------C-Ccc
Confidence 23667899999999999999999999999999999999999643 3344444443332111 1 122
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004979 659 ENVLEELLVVIKNCVHPDPKQRPSMRGIAA 688 (721)
Q Consensus 659 ~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 688 (721)
..+++++.+|+.+||+.||++|||+.|+++
T Consensus 294 ~~~s~~~~dli~~~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 294 HKVSPSLKGFLDRLLVRDPAQRATAAELLK 323 (346)
T ss_dssp GGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 345678999999999999999999999876
No 11
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=8.9e-49 Score=413.83 Aligned_cols=252 Identities=21% Similarity=0.314 Sum_probs=194.5
Q ss_pred hhhCcCCCCceeEEEEEEecCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCC--ceEEE
Q 004979 430 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEP--FTRMM 507 (721)
Q Consensus 430 ~ii~~lg~G~~g~Vyk~~~~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~--~~~~l 507 (721)
.+.++||+|+||+||+|++. |+.||||++.... .....+..|+..+.+++|||||+++|+|.+++. ...||
T Consensus 6 ~L~~~iG~G~fG~Vy~~~~~-g~~VAvK~l~~~~------~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~l 78 (303)
T 3hmm_A 6 VLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSRE------ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL 78 (303)
T ss_dssp EEEEEEEECSSSEEEEEEET-TEEEEEEEECGGG------HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred EEEEEEeeCCCeEEEEEEEC-CEEEEEEEECccc------hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEE
Confidence 34467899999999999984 8899999885432 112234456777788999999999999986542 24699
Q ss_pred EEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcC------CCCeEeeCCCCCCeEeCCCCcEEEeccCCC
Q 004979 508 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQL------TPPIAHRNLQSSSIYLTEDYAAKISDFSFW 581 (721)
Q Consensus 508 V~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~------~~~IvHrDLKp~NILl~~~~~~kL~DFGla 581 (721)
|||||++|+|.++|+. ..++|..+.+|+.|++.||+|||+. .++||||||||+||||++++++||+|||++
T Consensus 79 V~Ey~~~gsL~~~l~~---~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla 155 (303)
T 3hmm_A 79 VSDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 155 (303)
T ss_dssp EEECCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred EecCCCCCcHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCC
Confidence 9999999999999964 4589999999999999999999976 346999999999999999999999999997
Q ss_pred CCC-------------CCCCccccchhhcccC------CCCCCccHHHHHHHHHHHHhCCCcccCCC-------------
Q 004979 582 NNT-------------TAAKTGSAAMELLETS------AVDLESNVYSFGTILFEMITGRISYSIEN------------- 629 (721)
Q Consensus 582 ~~~-------------~~~~~~~~apE~~~~~------~~s~ksDVwSfGvvL~ElltG~~P~~~~~------------- 629 (721)
+.. ..++..|+|||++.+. .|+.++|||||||+||||+||+.||....
T Consensus 156 ~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~ 235 (303)
T 3hmm_A 156 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD 235 (303)
T ss_dssp EEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSS
T ss_pred ccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhccccc
Confidence 522 1356789999998654 46789999999999999999987764211
Q ss_pred CCHHHHHHHHhhcCCCCccccCCccccc--cHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcC
Q 004979 630 GSLENWASEYLKGEQPLKDIVDPTLKSF--QENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAME 697 (721)
Q Consensus 630 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~--~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 697 (721)
............ ...+|.++.. ..+++..+.+||.+||+.||++||||.||++.|+++.+..
T Consensus 236 ~~~~~~~~~~~~------~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~~ 299 (303)
T 3hmm_A 236 PSVEEMRKVVCE------QKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299 (303)
T ss_dssp CCHHHHHHHHTT------SCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred chHHHHHHHHhc------ccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHHc
Confidence 112222222211 1122333221 2356778999999999999999999999999999987653
No 12
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=6.4e-49 Score=412.14 Aligned_cols=252 Identities=19% Similarity=0.266 Sum_probs=205.6
Q ss_pred hhhhCcCCCCceeEEEEEEec----CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCce
Q 004979 429 SNIIGSFSDGTVGTVYKGTLS----SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFT 504 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~~----~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~ 504 (721)
|++++.||+|+||+||+|+.. +++.||+|++........ ...++.+|+++|++++|||||++++++.+++ .
T Consensus 26 Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~---~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~--~ 100 (304)
T 3ubd_A 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVR---DRVRTKMERDILVEVNHPFIVKLHYAFQTEG--K 100 (304)
T ss_dssp EEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEE---ECC------CCCCCCCCTTEECEEEEEEETT--E
T ss_pred cEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChH---HHHHHHHHHHHHHHCCCCCCCeEEEEEEECC--E
Confidence 478899999999999999852 467899999865432211 1236889999999999999999999999877 7
Q ss_pred EEEEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCC
Q 004979 505 RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT 584 (721)
Q Consensus 505 ~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~ 584 (721)
.|||||||++|+|.+++.. ...+++..+..|+.||+.||+|||+++ |+||||||+|||+++++.+||+|||+++..
T Consensus 101 ~~ivmEy~~gg~L~~~l~~--~~~l~e~~~~~~~~qi~~aL~ylH~~~--IiHRDlKp~NILl~~~g~vKl~DFGla~~~ 176 (304)
T 3ubd_A 101 LYLILDFLRGGDLFTRLSK--EVMFTEEDVKFYLAELALALDHLHSLG--IIYRDLKPENILLDEEGHIKLTDFGLSKES 176 (304)
T ss_dssp EEEEECCCTTCEEHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSSCCGGGEEECTTSCEEEESSEEEEC-
T ss_pred EEEEEEcCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC--CcCCCCCHHHeEEcCCCCEEecccccceec
Confidence 8999999999999999964 356999999999999999999999998 999999999999999999999999998632
Q ss_pred ---------CCCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccc
Q 004979 585 ---------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLK 655 (721)
Q Consensus 585 ---------~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 655 (721)
..++..|+|||.+.+..|+.++||||+||++|||+||+.||.. .+..+....+..+....
T Consensus 177 ~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~--~~~~~~~~~i~~~~~~~--------- 245 (304)
T 3ubd_A 177 IDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQG--KDRKETMTMILKAKLGM--------- 245 (304)
T ss_dssp ----CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCC--SSHHHHHHHHHHCCCCC---------
T ss_pred cCCCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCC--cCHHHHHHHHHcCCCCC---------
Confidence 2467789999999999999999999999999999999999964 34555555555543322
Q ss_pred cccHHHHHHHHHHHHHcccCCCCCCCCH-----HHHHHHHHHhhhcCCCCCCCCCChhHHHHHHh
Q 004979 656 SFQENVLEELLVVIKNCVHPDPKQRPSM-----RGIAAKLKEITAMEPDGATPKLSPLWWAELEI 715 (721)
Q Consensus 656 ~~~~~~~~~l~~li~~Cl~~dP~~RPs~-----~evl~~L~~i~~~~~~~~~p~~~~~~~~~l~~ 715 (721)
+..+++++.+|+.+||+.||++|||+ +|+++ +|++..++|+.++-
T Consensus 246 --p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~-------------Hp~f~~idw~~l~~ 295 (304)
T 3ubd_A 246 --PQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKR-------------HSFFSTIDWNKLYR 295 (304)
T ss_dssp --CTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHT-------------SGGGTTCCHHHHHT
T ss_pred --CCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHc-------------CccccCCCHHHHHh
Confidence 23345778999999999999999985 45542 78889999998854
No 13
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1e-47 Score=397.55 Aligned_cols=238 Identities=22% Similarity=0.341 Sum_probs=193.0
Q ss_pred hhhhCcCCCCceeEEEEEEe-cCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEEE
Q 004979 429 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 507 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~-~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~l 507 (721)
|++++.||+|+||+||+|+. .+++.||+|++......+ ....+.+.+|+++|++++|||||++++++.+.+ ..|+
T Consensus 15 Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~--~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~--~~~i 90 (275)
T 3hyh_A 15 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAK--SDMQGRIEREISYLRLLRHPHIIKLYDVIKSKD--EIIM 90 (275)
T ss_dssp CEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC--------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEE
T ss_pred eEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCC--HHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECC--EEEE
Confidence 47888999999999999995 478999999987543222 223467999999999999999999999999877 7899
Q ss_pred EEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCC---
Q 004979 508 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT--- 584 (721)
Q Consensus 508 V~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~--- 584 (721)
||||+ +|+|.+++.. ...+++.....++.||+.||+|||+++ |+||||||+|||+++++.+||+|||+++..
T Consensus 91 vmEy~-~g~L~~~l~~--~~~l~e~~~~~~~~qi~~al~ylH~~~--IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~ 165 (275)
T 3hyh_A 91 VIEYA-GNELFDYIVQ--RDKMSEQEARRFFQQIISAVEYCHRHK--IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG 165 (275)
T ss_dssp EEECC-CEEHHHHHHH--SCSCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCTTTEEECTTCCEEECCSSCC------
T ss_pred EEeCC-CCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC--cccccCChHHeEECCCCCEEEeecCCCeecCCC
Confidence 99999 7899999864 456999999999999999999999998 999999999999999999999999998643
Q ss_pred -----CCCCccccchhhcccCCC-CCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004979 585 -----TAAKTGSAAMELLETSAV-DLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 658 (721)
Q Consensus 585 -----~~~~~~~~apE~~~~~~~-s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 658 (721)
..++..|+|||++.+..| +.++||||+||++|||+||+.||.. .+..+....+..+...+ +
T Consensus 166 ~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~--~~~~~~~~~i~~~~~~~-----------p 232 (275)
T 3hyh_A 166 NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD--ESIPVLFKNISNGVYTL-----------P 232 (275)
T ss_dssp ---------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCC--SSHHHHHHHHHHTCCCC-----------C
T ss_pred CccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCC--CCHHHHHHHHHcCCCCC-----------C
Confidence 246778999999988876 5799999999999999999999964 34555555555543322 2
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004979 659 ENVLEELLVVIKNCVHPDPKQRPSMRGIAA 688 (721)
Q Consensus 659 ~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 688 (721)
...++++.+|+.+||+.||++|||++|+++
T Consensus 233 ~~~s~~~~~li~~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 233 KFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp TTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred CCCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence 234567889999999999999999999986
No 14
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=6.6e-48 Score=420.48 Aligned_cols=239 Identities=21% Similarity=0.289 Sum_probs=200.6
Q ss_pred hhhhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEE
Q 004979 428 FSNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRM 506 (721)
Q Consensus 428 ~~~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~ 506 (721)
+|+++++||+|+||+||+|+.. +|+.||||++....... .+.+.+|+++|++++|||||++++++.+.+ ..|
T Consensus 152 ~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~-----~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~--~~~ 224 (423)
T 4fie_A 152 YLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR-----RELLFNEVVIMRDYQHENVVEMYNSYLVGD--ELW 224 (423)
T ss_dssp TEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSS-----GGGHHHHHHHHHHCCCTTBCCEEEEEEETT--EEE
T ss_pred hcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhH-----HHHHHHHHHHHHhCCCCCCCceEEEEEECC--EEE
Confidence 4578889999999999999964 68999999987543322 246889999999999999999999999877 789
Q ss_pred EEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCC--
Q 004979 507 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT-- 584 (721)
Q Consensus 507 lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~-- 584 (721)
||||||++|+|.+++.. ..+++.++..|+.||+.||+|||+++ ||||||||+||||+.++.+||+|||+++..
T Consensus 225 iVmEy~~gG~L~~~i~~---~~l~e~~~~~~~~qil~aL~ylH~~~--IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~ 299 (423)
T 4fie_A 225 VVMEFLEGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQG--VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK 299 (423)
T ss_dssp EEEECCTTEEHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSTTTEEECTTCCEEECCCTTCEECCS
T ss_pred EEEeCCCCCcHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHHHCC--eecccCCHHHEEEcCCCCEEEecCccceECCC
Confidence 99999999999999853 35899999999999999999999998 999999999999999999999999998632
Q ss_pred -------CCCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccc
Q 004979 585 -------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSF 657 (721)
Q Consensus 585 -------~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 657 (721)
..++..|||||++.+..|+.++|||||||++|||++|+.||... +..+....+.....+. + ..
T Consensus 300 ~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~--~~~~~~~~i~~~~~~~-------~-~~ 369 (423)
T 4fie_A 300 EVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE--PPLKAMKMIRDNLPPR-------L-KN 369 (423)
T ss_dssp SCCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTS--CHHHHHHHHHHSCCCC-------C-SC
T ss_pred CCccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc--CHHHHHHHHHcCCCCC-------C-cc
Confidence 23567899999999999999999999999999999999999643 3344444443332111 1 11
Q ss_pred cHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004979 658 QENVLEELLVVIKNCVHPDPKQRPSMRGIAA 688 (721)
Q Consensus 658 ~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 688 (721)
...++.++.+|+.+||+.||++|||+.|+++
T Consensus 370 ~~~~s~~~~dli~~~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 370 LHKVSPSLKGFLDRLLVRDPAQRATAAELLK 400 (423)
T ss_dssp TTSSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred cccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 2345578899999999999999999999876
No 15
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=5.1e-47 Score=398.84 Aligned_cols=239 Identities=18% Similarity=0.299 Sum_probs=187.2
Q ss_pred hhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCC------
Q 004979 430 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEP------ 502 (721)
Q Consensus 430 ~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~------ 502 (721)
++++.||+|+||+||+|+.. +++.||||++..... ....+.+.+|+++|++++|||||++++++.+.+.
T Consensus 8 ~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~----~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~ 83 (299)
T 4g31_A 8 EPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNR----ELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQP 83 (299)
T ss_dssp EEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSS----HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC-------
T ss_pred EEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCC----HHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccc
Confidence 77889999999999999964 688999999875432 2345679999999999999999999999875432
Q ss_pred ----ceEEEEEecCCCCChhhhhhhcc-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEec
Q 004979 503 ----FTRMMVFEYSPNGSLFEHLHIQE-AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISD 577 (721)
Q Consensus 503 ----~~~~lV~Ey~~~GsL~~~l~~~~-~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~D 577 (721)
...|+|||||++|+|.+++.... ....++...+.|+.||+.||+|||+++ ||||||||+|||++.++.+||+|
T Consensus 84 ~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~--IiHRDlKp~NILl~~~~~vKl~D 161 (299)
T 4g31_A 84 SSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKG--LMHRDLKPSNIFFTMDDVVKVGD 161 (299)
T ss_dssp ---CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTCCEEECC
T ss_pred cCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCc--CccccCcHHHeEECCCCcEEEcc
Confidence 13689999999999999997543 234677788899999999999999998 99999999999999999999999
Q ss_pred cCCCCCCC---------------------CCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHH
Q 004979 578 FSFWNNTT---------------------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWA 636 (721)
Q Consensus 578 FGla~~~~---------------------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~ 636 (721)
||+++... .|+..|||||.+.+..|+.++|||||||++|||++ ||.... +.....
T Consensus 162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~-~~~~~~ 237 (299)
T 4g31_A 162 FGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQM-ERVRTL 237 (299)
T ss_dssp CCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHH-HHHHHH
T ss_pred CccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCcc-HHHHHH
Confidence 99986432 36778999999999999999999999999999997 774221 111111
Q ss_pred HHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004979 637 SEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 688 (721)
Q Consensus 637 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 688 (721)
...... ..+.......+++.+|+.+||+.||++|||+.|+++
T Consensus 238 ~~~~~~----------~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 238 TDVRNL----------KFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp HHHHTT----------CCCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHhcC----------CCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 111111 111222344556788999999999999999999875
No 16
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=5.7e-44 Score=406.39 Aligned_cols=255 Identities=19% Similarity=0.240 Sum_probs=205.4
Q ss_pred hhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccch-hhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEEE
Q 004979 430 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADW-SKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 507 (721)
Q Consensus 430 ~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~-~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~l 507 (721)
++++.||+|+||+||+|+.. +|+.||+|++.+...... ..........++++++.++|||||++++++.+.+ ..||
T Consensus 192 ~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~--~lyl 269 (689)
T 3v5w_A 192 SVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPD--KLSF 269 (689)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSS--EEEE
T ss_pred EEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECC--EEEE
Confidence 77889999999999999964 689999999875432211 1111223344577888899999999999999887 7899
Q ss_pred EEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCC----
Q 004979 508 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN---- 583 (721)
Q Consensus 508 V~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~---- 583 (721)
|||||+||+|.++|.. ...+++..+..|+.||+.||+|||+++ ||||||||+||||+.+|.+||+|||+++.
T Consensus 270 VmEy~~GGdL~~~l~~--~~~l~E~~a~~y~~qIl~aL~yLH~~g--IiHRDLKPeNILld~~G~vKL~DFGlA~~~~~~ 345 (689)
T 3v5w_A 270 ILDLMNGGDLHYHLSQ--HGVFSEADMRFYAAEIILGLEHMHNRF--VVYRDLKPANILLDEHGHVRISDLGLACDFSKK 345 (689)
T ss_dssp EECCCCSCBHHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHTTT--EECCCCSGGGEEECTTSCEEECCCTTCEECSSC
T ss_pred EEecCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCchHHeEEeCCCCEEecccceeeecCCC
Confidence 9999999999999964 356999999999999999999999998 99999999999999999999999999863
Q ss_pred ---CCCCCccccchhhcc-cCCCCCCccHHHHHHHHHHHHhCCCcccCCCC-CHHHHHHHHhhcCCCCccccCCcccccc
Q 004979 584 ---TTAAKTGSAAMELLE-TSAVDLESNVYSFGTILFEMITGRISYSIENG-SLENWASEYLKGEQPLKDIVDPTLKSFQ 658 (721)
Q Consensus 584 ---~~~~~~~~~apE~~~-~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 658 (721)
...|+..|+|||++. +..|+.++||||+||++|||+||+.||...+. +..+........... ++
T Consensus 346 ~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~~~~-----------~p 414 (689)
T 3v5w_A 346 KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVE-----------LP 414 (689)
T ss_dssp CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHCCCC-----------CC
T ss_pred CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCC-----------CC
Confidence 234678899999996 45799999999999999999999999975432 333444444433222 22
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCC-----HHHHHHHHHHhhhcCCCCCCCCCChhHHHHHH
Q 004979 659 ENVLEELLVVIKNCVHPDPKQRPS-----MRGIAAKLKEITAMEPDGATPKLSPLWWAELE 714 (721)
Q Consensus 659 ~~~~~~l~~li~~Cl~~dP~~RPs-----~~evl~~L~~i~~~~~~~~~p~~~~~~~~~l~ 714 (721)
...+.++.+||.+||+.||++|++ +.||.+ ||++..++|+.|.
T Consensus 415 ~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~-------------HpfF~~idW~~l~ 462 (689)
T 3v5w_A 415 DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE-------------SPFFRSLDWQMVF 462 (689)
T ss_dssp TTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT-------------SGGGTTCCHHHHH
T ss_pred ccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhc-------------CccccCCCHHHHH
Confidence 345678899999999999999998 677643 6777777787774
No 17
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=7.2e-44 Score=389.05 Aligned_cols=250 Identities=17% Similarity=0.215 Sum_probs=195.8
Q ss_pred hhhhCcCCCCceeEEEEEEe-cCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCC----Cc
Q 004979 429 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDE----PF 503 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~-~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~----~~ 503 (721)
|++++.||+|+||+||+|+. .+|+.||||++..... .....+.+.+|+++|++++|||||++++++.... ..
T Consensus 56 Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~---~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~ 132 (398)
T 4b99_A 56 YEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFD---VVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFK 132 (398)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTS---SHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCC
T ss_pred eEEEEEEecccCeEEEEEEECCCCCEEEEEEECcccc---chHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCC
Confidence 47888999999999999996 4789999999864322 1233467899999999999999999999986432 22
Q ss_pred eEEEEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCC
Q 004979 504 TRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN 583 (721)
Q Consensus 504 ~~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~ 583 (721)
..|||||||+ |+|.+++. ....+++..+..|+.||+.||+|||+++ ||||||||+|||++.++.+||+|||+++.
T Consensus 133 ~~~ivmE~~~-g~L~~~i~--~~~~l~~~~~~~~~~qil~al~ylH~~~--iiHRDlKP~NIl~~~~~~~Ki~DFGla~~ 207 (398)
T 4b99_A 133 SVYVVLDLME-SDLHQIIH--SSQPLTLEHVRYFLYQLLRGLKYMHSAQ--VIHRDLKPSNLLVNENCELKIGDFGMARG 207 (398)
T ss_dssp CEEEEEECCS-EEHHHHHT--SSSCCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCCGGGEEECTTCCEEECCCTTCBC
T ss_pred EEEEEEeCCC-CCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCc--CcCCCcCccccccCCCCCEEEeecceeee
Confidence 6799999995 78999986 3457999999999999999999999998 99999999999999999999999999863
Q ss_pred C-------------CCCCccccchhhcccC-CCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCC-cc
Q 004979 584 T-------------TAAKTGSAAMELLETS-AVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPL-KD 648 (721)
Q Consensus 584 ~-------------~~~~~~~~apE~~~~~-~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~-~~ 648 (721)
. ..++..|+|||++.+. .|+.++||||+||++|||+||+.||.+.+ ..+.+..+....... ..
T Consensus 208 ~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~--~~~~l~~I~~~~g~p~~~ 285 (398)
T 4b99_A 208 LCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKN--YVHQLQLIMMVLGTPSPA 285 (398)
T ss_dssp C-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSS--HHHHHHHHHHHHCCCCGG
T ss_pred cccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCC--HHHHHHHHHHhcCCCChH
Confidence 2 2456789999998764 56999999999999999999999996443 233333322211110 10
Q ss_pred ccC---------------C----ccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004979 649 IVD---------------P----TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 688 (721)
Q Consensus 649 ~~d---------------~----~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 688 (721)
... + .+....+..+.++.+|+.+||+.||++|||+.|+++
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 344 (398)
T 4b99_A 286 VIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR 344 (398)
T ss_dssp GTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred HhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 000 0 000111234578899999999999999999999986
No 18
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=3.8e-43 Score=379.20 Aligned_cols=245 Identities=19% Similarity=0.327 Sum_probs=190.4
Q ss_pred hhhhhhCcCCCCceeEEEEEEec----CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcC-CCCccceEeEEEecCC
Q 004979 427 DFSNIIGSFSDGTVGTVYKGTLS----SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDE 501 (721)
Q Consensus 427 ~~~~ii~~lg~G~~g~Vyk~~~~----~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l-~H~nIv~l~g~~~~~~ 501 (721)
+.|++++.||+|+||+||+|+.+ +++.||+|++..... ..++.+|+++|.++ +|||||++++++.+.+
T Consensus 21 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~-------~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~ 93 (361)
T 4f9c_A 21 NVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSH-------PIRIAAELQCLTVAGGQDNVMGVKYCFRKND 93 (361)
T ss_dssp GTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSC-------HHHHHHHHHHHHHTCSBTTBCCCSEEEEETT
T ss_pred CcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccccC-------HHHHHHHHHHHHHhcCCCCCceEEEEEEECC
Confidence 44688899999999999999853 467899998754321 24678999999998 6999999999999877
Q ss_pred CceEEEEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCC-CcEEEeccCC
Q 004979 502 PFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTED-YAAKISDFSF 580 (721)
Q Consensus 502 ~~~~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~-~~~kL~DFGl 580 (721)
+.|+|||||++|+|.+++. .+++.+...++.|++.||+|||+++ |+||||||+|||++.+ +.+||+|||+
T Consensus 94 --~~~lvmE~~~g~~L~~~~~-----~l~~~~~~~~~~qll~al~ylH~~g--IiHRDiKPeNiLl~~~~~~~kl~DFGl 164 (361)
T 4f9c_A 94 --HVVIAMPYLEHESFLDILN-----SLSFQEVREYMLNLFKALKRIHQFG--IVHRDVKPSNFLYNRRLKKYALVDFGL 164 (361)
T ss_dssp --EEEEEEECCCCCCHHHHHT-----TCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred --EEEEEEeCCCcccHHHHHc-----CCCHHHHHHHHHHHHHHHHHHHHCC--eEeCcCCHHHeEEeCCCCeEEECcCCC
Confidence 7899999999999999983 4899999999999999999999998 9999999999999876 7999999999
Q ss_pred CCCC-------------------------------------CCCCccccchhhcccC-CCCCCccHHHHHHHHHHHHhCC
Q 004979 581 WNNT-------------------------------------TAAKTGSAAMELLETS-AVDLESNVYSFGTILFEMITGR 622 (721)
Q Consensus 581 a~~~-------------------------------------~~~~~~~~apE~~~~~-~~s~ksDVwSfGvvL~ElltG~ 622 (721)
|+.. ..++..|+|||++.+. .|+.++||||+||++|||+||+
T Consensus 165 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~ 244 (361)
T 4f9c_A 165 AQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGR 244 (361)
T ss_dssp CEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTC
T ss_pred CcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCC
Confidence 8532 1367789999998765 5899999999999999999999
Q ss_pred CcccCCCCCHHHHHHHHhh--c-------------------CCCCcc---c------cC---Ccc----------ccccH
Q 004979 623 ISYSIENGSLENWASEYLK--G-------------------EQPLKD---I------VD---PTL----------KSFQE 659 (721)
Q Consensus 623 ~P~~~~~~~~~~~~~~~~~--~-------------------~~~~~~---~------~d---~~l----------~~~~~ 659 (721)
.||.....+.... ..+.. + ..+..+ . .+ +.. .....
T Consensus 245 ~Pf~~~~~~~~~l-~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 323 (361)
T 4f9c_A 245 YPFYKASDDLTAL-AQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWN 323 (361)
T ss_dssp SSSSCCSSHHHHH-HHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CT
T ss_pred CCCCCCCCHHHHH-HHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccc
Confidence 9996544332211 11110 0 000000 0 00 000 00112
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004979 660 NVLEELLVVIKNCVHPDPKQRPSMRGIAA 688 (721)
Q Consensus 660 ~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 688 (721)
..++++.+|+.+||+.||++|||++|+++
T Consensus 324 ~is~~a~DLl~~lL~~dP~~R~ta~eaL~ 352 (361)
T 4f9c_A 324 EVPDEAYDLLDKLLDLNPASRITAEEALL 352 (361)
T ss_dssp TCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred cCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 34567899999999999999999999875
No 19
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=2.5e-42 Score=394.84 Aligned_cols=241 Identities=22% Similarity=0.304 Sum_probs=201.7
Q ss_pred hhhhCcCCCCceeEEEEEEe-cCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEEE
Q 004979 429 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 507 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~-~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~l 507 (721)
|++++.||+|+||+||+|+. .+|+.||+|++..... ...+.+.+|+++|++++|||||++++++.+.+ ..||
T Consensus 159 Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~-----~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~--~~~i 231 (573)
T 3uto_A 159 YDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHE-----SDKETVRKEIQTMSVLRHPTLVNLHDAFEDDN--EMVM 231 (573)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSH-----HHHHHHHHHHHHHHHTCCTTBCCEEEEEECSS--EEEE
T ss_pred cEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccch-----hhHHHHHHHHHHHHhCCCCCCCeEEEEEEECC--EEEE
Confidence 47888999999999999996 4789999998865432 23467899999999999999999999999877 7899
Q ss_pred EEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCC--CcEEEeccCCCCCCC
Q 004979 508 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTED--YAAKISDFSFWNNTT 585 (721)
Q Consensus 508 V~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~--~~~kL~DFGla~~~~ 585 (721)
|||||++|+|.+++.. ....+++..+..|+.||+.||+|||+++ |+||||||+|||++.+ +.+||+|||+++...
T Consensus 232 v~E~~~gg~L~~~i~~-~~~~l~e~~~~~~~~qi~~al~ylH~~~--iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~ 308 (573)
T 3uto_A 232 IYEFMSGGELFEKVAD-EHNKMSEDEAVEYMRQVCKGLCHMHENN--YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLD 308 (573)
T ss_dssp EEECCCCCBHHHHHTC-TTSCEEHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEESSSSCCCEEECCCSSCEECC
T ss_pred EEeecCCCcHHHHHHH-hCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeeccCChhhccccCCCCCCEEEeeccceeEcc
Confidence 9999999999999853 3356999999999999999999999998 9999999999999854 899999999987543
Q ss_pred --------CCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccc
Q 004979 586 --------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSF 657 (721)
Q Consensus 586 --------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 657 (721)
.++..|+|||++.+..|+.++||||+||++|||++|+.||... +..+....+......... ..
T Consensus 309 ~~~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~--~~~~~~~~i~~~~~~~~~-------~~ 379 (573)
T 3uto_A 309 PKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGE--NDDETLRNVKSCDWNMDD-------SA 379 (573)
T ss_dssp TTSEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCS--SHHHHHHHHHTTCCCCCS-------GG
T ss_pred CCCceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc--CHHHHHHHHHhCCCCCCc-------cc
Confidence 3567899999999999999999999999999999999999643 444555555444322211 11
Q ss_pred cHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004979 658 QENVLEELLVVIKNCVHPDPKQRPSMRGIAA 688 (721)
Q Consensus 658 ~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 688 (721)
...++.++.+||.+||+.||++|||+.|+++
T Consensus 380 ~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 380 FSGISEDGKDFIRKLLLADPNTRMTIHQALE 410 (573)
T ss_dssp GTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred ccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 2334577899999999999999999999976
No 20
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=7.9e-42 Score=364.06 Aligned_cols=262 Identities=30% Similarity=0.522 Sum_probs=215.6
Q ss_pred HhhhhhhhCcCCCCceeEEEEEEecCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCce
Q 004979 425 CEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFT 504 (721)
Q Consensus 425 ~~~~~~ii~~lg~G~~g~Vyk~~~~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~ 504 (721)
+++| ++...+|+|+||+||+|+..++..||||++..... ...+.+.+|++++++++||||+++++++.+.+ .
T Consensus 38 ~~~y-~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~ 109 (321)
T 2qkw_B 38 TNNF-DHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESS-----QGIEEFETEIETLSFCRHPHLVSLIGFCDERN--E 109 (321)
T ss_dssp CCCC-SCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCS-----SHHHHHHHHHHGGGSCCCTTBCCEEEECCCTT--C
T ss_pred Hhcc-CccceeecCCCeeEEEEEECCCCEEEEEEecccCh-----HHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCC--e
Confidence 3444 66788999999999999988899999998764322 23467999999999999999999999998776 5
Q ss_pred EEEEEecCCCCChhhhhhhcc--CCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCC
Q 004979 505 RMMVFEYSPNGSLFEHLHIQE--AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWN 582 (721)
Q Consensus 505 ~~lV~Ey~~~GsL~~~l~~~~--~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~ 582 (721)
.++||||+++|+|.+++.... ...++|..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++
T Consensus 110 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--ivH~dlkp~Nil~~~~~~~kl~Dfg~~~ 187 (321)
T 2qkw_B 110 MILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA--IIHRDVKSINILLDENFVPKITDFGISK 187 (321)
T ss_dssp CEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCSTTEEECTTCCEEECCCTTCE
T ss_pred EEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCC--eecCCCCHHHEEECCCCCEEEeeccccc
Confidence 699999999999999986433 235999999999999999999999988 9999999999999999999999999875
Q ss_pred CCC-----------CCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCC----CCHHHHHHHHhhcCCCCc
Q 004979 583 NTT-----------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIEN----GSLENWASEYLKGEQPLK 647 (721)
Q Consensus 583 ~~~-----------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~----~~~~~~~~~~~~~~~~~~ 647 (721)
... .++..|+|||.+.+..++.++|||||||++|||+||+.||.... ....+|...... ...+.
T Consensus 188 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~ 266 (321)
T 2qkw_B 188 KGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHN-NGQLE 266 (321)
T ss_dssp ECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHT-TTCCC
T ss_pred ccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccc-cccHH
Confidence 321 13457999999988899999999999999999999999996432 233444433322 23344
Q ss_pred cccCCccc-cccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcC
Q 004979 648 DIVDPTLK-SFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAME 697 (721)
Q Consensus 648 ~~~d~~l~-~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 697 (721)
..+++... ......+.++.+++.+||+.||++||++.|+++.|+.+.+..
T Consensus 267 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~~ 317 (321)
T 2qkw_B 267 QIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQ 317 (321)
T ss_dssp SSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred HhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhcc
Confidence 55555443 345778899999999999999999999999999999987754
No 21
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=1.7e-41 Score=361.96 Aligned_cols=273 Identities=29% Similarity=0.555 Sum_probs=220.7
Q ss_pred CCCCCHHHHHHHHhhhhhhhCcCCCCceeEEEEEEecCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccce
Q 004979 413 VPKLKRSELEAACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVN 492 (721)
Q Consensus 413 ~~~~~~~~l~~~~~~~~~ii~~lg~G~~g~Vyk~~~~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~ 492 (721)
...++..++....++| ++.+.+|+|+||+||+|+..++..||||++....... ....+.+|++++++++||||++
T Consensus 17 ~~~~~~~~~~~~~~~y-~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~----~~~~~~~e~~~l~~l~h~~iv~ 91 (326)
T 3uim_A 17 LKRFSLRELQVASDNF-SNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQG----GELQFQTEVEMISMAVHRNLLR 91 (326)
T ss_dssp CEECCTHHHHTTTTSS-CSTTEEECCSSSEEEEECCSSSCCEEEEECCC---------CCCHHHHHHHGGGTCCCTTBCC
T ss_pred cceecHHHHHHHhhcc-ccceeEecCCCcEEEEEEecCCCEEEEEEeccccCch----HHHHHHHHHHHHHhccCCCccc
Confidence 4567778888777666 7788899999999999998889999999986543221 1236899999999999999999
Q ss_pred EeEEEecCCCceEEEEEecCCCCChhhhhhhcc--CCCCCHHHHHHHHHHHHHHHHHHhcC-CCCeEeeCCCCCCeEeCC
Q 004979 493 LIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQE--AEHLDWAMRLRIAMGMAYCLEHMHQL-TPPIAHRNLQSSSIYLTE 569 (721)
Q Consensus 493 l~g~~~~~~~~~~~lV~Ey~~~GsL~~~l~~~~--~~~l~~~~~~~ia~~ia~gL~yLH~~-~~~IvHrDLKp~NILl~~ 569 (721)
+++++...+ ..++||||+++|+|.++++... ...++|..+..|+.|++.||+|||+. .++|+||||||+|||+++
T Consensus 92 ~~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~ 169 (326)
T 3uim_A 92 LRGFCMTPT--ERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDE 169 (326)
T ss_dssp CCEEECCSS--CCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECT
T ss_pred eEEEEecCC--ceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECC
Confidence 999998876 5699999999999999997543 34599999999999999999999987 112999999999999999
Q ss_pred CCcEEEeccCCCCCCC----------CCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccC------CCCCHH
Q 004979 570 DYAAKISDFSFWNNTT----------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSI------ENGSLE 633 (721)
Q Consensus 570 ~~~~kL~DFGla~~~~----------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~------~~~~~~ 633 (721)
++.+||+|||+++... .++..|+|||.+.+..++.++|||||||++|||+||+.||.. ......
T Consensus 170 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~ 249 (326)
T 3uim_A 170 EFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLL 249 (326)
T ss_dssp TCCEEECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHH
T ss_pred CCCEEeccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHH
Confidence 9999999999985321 245679999999888899999999999999999999999951 223344
Q ss_pred HHHHHHhhcCCCCccccCCccc-cccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHh
Q 004979 634 NWASEYLKGEQPLKDIVDPTLK-SFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 693 (721)
Q Consensus 634 ~~~~~~~~~~~~~~~~~d~~l~-~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~i 693 (721)
+|+...... .....+.+.... ......+.++.+++.+||+.||++|||+.||++.|++.
T Consensus 250 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~ 309 (326)
T 3uim_A 250 DWVKGLLKE-KKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 309 (326)
T ss_dssp HHHTTTTSS-CCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTS
T ss_pred HHHHHHhhc-hhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCc
Confidence 554443332 233444444332 45677889999999999999999999999999999874
No 22
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=1.4e-40 Score=351.79 Aligned_cols=277 Identities=29% Similarity=0.506 Sum_probs=225.4
Q ss_pred CCCCCCHHHHHHHHhhhhh-----hhCcCCCCceeEEEEEEecCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCC
Q 004979 412 GVPKLKRSELEAACEDFSN-----IIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN 486 (721)
Q Consensus 412 ~~~~~~~~~l~~~~~~~~~-----ii~~lg~G~~g~Vyk~~~~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~ 486 (721)
....++..++..++++|.. ....+|+|+||+||+|+. ++..|+||++...... ......+.+.+|++++++++
T Consensus 11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~~~E~~~l~~l~ 88 (307)
T 2nru_A 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDI-TTEELKQQFDQEIKVMAKCQ 88 (307)
T ss_dssp CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTS-CTTTHHHHHHHHHHHHHHCC
T ss_pred CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCc-chHHHHHHHHHHHHHHHhcC
Confidence 3457888999999998862 126789999999999987 5788999988643221 12334577999999999999
Q ss_pred CCccceEeEEEecCCCceEEEEEecCCCCChhhhhhhc-cCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCe
Q 004979 487 HKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQ-EAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSI 565 (721)
Q Consensus 487 H~nIv~l~g~~~~~~~~~~~lV~Ey~~~GsL~~~l~~~-~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NI 565 (721)
||||+++++++.+.+ ..++||||+++|+|.+++... ....+++..+..|+.|++.||+|||+.+ |+||||||+||
T Consensus 89 h~~i~~~~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--i~H~dlkp~Ni 164 (307)
T 2nru_A 89 HENLVELLGFSSDGD--DLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENH--HIHRDIKSANI 164 (307)
T ss_dssp CTTBCCEEEEECSSS--SCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGE
T ss_pred CCCeEEEEEEEecCC--ceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCC--eecCCCCHHHE
Confidence 999999999998876 569999999999999998643 2456999999999999999999999988 99999999999
Q ss_pred EeCCCCcEEEeccCCCCCC-----------CCCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCC--CCH
Q 004979 566 YLTEDYAAKISDFSFWNNT-----------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIEN--GSL 632 (721)
Q Consensus 566 Ll~~~~~~kL~DFGla~~~-----------~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~--~~~ 632 (721)
|+++++.+||+|||+++.. ..++..|+|||.+.+ .++.++|||||||++|||+||+.||.... ...
T Consensus 165 li~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~ 243 (307)
T 2nru_A 165 LLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLL 243 (307)
T ss_dssp EECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBT
T ss_pred EEcCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHH
Confidence 9999999999999987532 134567999998764 58899999999999999999999997433 223
Q ss_pred HHHHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhh
Q 004979 633 ENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITA 695 (721)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~i~~ 695 (721)
..+..........+...+++.+.......+.++.+++.+||+.||++||++.||++.|+++.+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 244 LDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp THHHHHHHTTSCCHHHHSCSSCSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred HHHHHHhhhhhhhhhhhccccccccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 344444433344445555666666677888999999999999999999999999999998764
No 23
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=5.4e-41 Score=355.91 Aligned_cols=252 Identities=26% Similarity=0.395 Sum_probs=201.6
Q ss_pred hhhCcCCCCceeEEEEEEecCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEEEEE
Q 004979 430 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 509 (721)
Q Consensus 430 ~ii~~lg~G~~g~Vyk~~~~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~lV~ 509 (721)
++.+.+|+|+||+||+|+. ++..||||++..... .....+.|.+|++++++++||||+++++++.+.+ ..++||
T Consensus 40 ~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~---~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~ 113 (309)
T 3p86_A 40 NIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDF---HAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPP--NLSIVT 113 (309)
T ss_dssp EEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCC---SHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTT--CCEEEE
T ss_pred eeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCC---CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC--ceEEEE
Confidence 6778899999999999987 478899998865432 2334567999999999999999999999998776 569999
Q ss_pred ecCCCCChhhhhhhcc-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCC----
Q 004979 510 EYSPNGSLFEHLHIQE-AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT---- 584 (721)
Q Consensus 510 Ey~~~GsL~~~l~~~~-~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~---- 584 (721)
||+++|+|.+++.... ...+++..+..++.|++.||+|||+.+++|+||||||+|||++.++.+||+|||+++..
T Consensus 114 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~ 193 (309)
T 3p86_A 114 EYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTF 193 (309)
T ss_dssp ECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTCCEEECCCC---------
T ss_pred ecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCCcEEECCCCCCccccccc
Confidence 9999999999986432 12489999999999999999999998878999999999999999999999999987532
Q ss_pred -----CCCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccH
Q 004979 585 -----TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQE 659 (721)
Q Consensus 585 -----~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 659 (721)
..++..|+|||.+.+..++.++|||||||++|||+||+.||... +..+........... ...+.
T Consensus 194 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~--~~~~~~~~~~~~~~~---------~~~~~ 262 (309)
T 3p86_A 194 LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNL--NPAQVVAAVGFKCKR---------LEIPR 262 (309)
T ss_dssp --------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTS--CHHHHHHHHHHSCCC---------CCCCT
T ss_pred cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC--CHHHHHHHHHhcCCC---------CCCCc
Confidence 23456799999999999999999999999999999999999633 233333322211111 11223
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCC
Q 004979 660 NVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEP 698 (721)
Q Consensus 660 ~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 698 (721)
.++.++.+++.+||+.||++||++.|+++.|+.+.+...
T Consensus 263 ~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~~ 301 (309)
T 3p86_A 263 NLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAV 301 (309)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC---
T ss_pred cCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhCC
Confidence 455678999999999999999999999999999877543
No 24
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=9.6e-41 Score=363.08 Aligned_cols=250 Identities=23% Similarity=0.399 Sum_probs=203.3
Q ss_pred hhhhCcCCCCceeEEEEEEec--------CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcC-CCCccceEeEEEec
Q 004979 429 SNIIGSFSDGTVGTVYKGTLS--------SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEE 499 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~~--------~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l-~H~nIv~l~g~~~~ 499 (721)
+++.+.||+|+||+||+|+.. ++..||||++.... .....+.+.+|+++|+++ +|||||+++++|.+
T Consensus 83 ~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 158 (370)
T 2psq_A 83 LTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA----TEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 158 (370)
T ss_dssp EEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTC----BHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECS
T ss_pred CEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCc----CHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEcc
Confidence 367788999999999999852 34569999886432 233456799999999999 89999999999988
Q ss_pred CCCceEEEEEecCCCCChhhhhhhcc--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCe
Q 004979 500 DEPFTRMMVFEYSPNGSLFEHLHIQE--------------AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSI 565 (721)
Q Consensus 500 ~~~~~~~lV~Ey~~~GsL~~~l~~~~--------------~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NI 565 (721)
.+ ..++||||+++|+|.+++.... ...+++..+..++.||+.||+|||+++ |+||||||+||
T Consensus 159 ~~--~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlkp~NI 234 (370)
T 2psq_A 159 DG--PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNV 234 (370)
T ss_dssp SS--SCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGE
T ss_pred CC--CEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC--eeccccchhhE
Confidence 76 5699999999999999997532 235899999999999999999999998 99999999999
Q ss_pred EeCCCCcEEEeccCCCCCCC-----------CCCccccchhhcccCCCCCCccHHHHHHHHHHHHh-CCCcccCCCCCHH
Q 004979 566 YLTEDYAAKISDFSFWNNTT-----------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLE 633 (721)
Q Consensus 566 Ll~~~~~~kL~DFGla~~~~-----------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~Ellt-G~~P~~~~~~~~~ 633 (721)
|++.++.+||+|||+++... .++..|+|||.+.+..++.++|||||||++|||+| |+.||.... ..
T Consensus 235 ll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~--~~ 312 (370)
T 2psq_A 235 LVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP--VE 312 (370)
T ss_dssp EECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC--GG
T ss_pred EECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCC--HH
Confidence 99999999999999986321 12346999999999999999999999999999999 999996432 22
Q ss_pred HHHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCC
Q 004979 634 NWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEP 698 (721)
Q Consensus 634 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 698 (721)
+.......+.. ...+..++.++.+++.+||+.||++||++.|+++.|+++.....
T Consensus 313 ~~~~~~~~~~~----------~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~~~ 367 (370)
T 2psq_A 313 ELFKLLKEGHR----------MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT 367 (370)
T ss_dssp GHHHHHHTTCC----------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHhcCCC----------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHhc
Confidence 33332222211 11223456789999999999999999999999999999876543
No 25
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=4.1e-40 Score=353.21 Aligned_cols=238 Identities=20% Similarity=0.265 Sum_probs=198.2
Q ss_pred hhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEEEE
Q 004979 430 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 508 (721)
Q Consensus 430 ~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~lV 508 (721)
++++.+|+|+||+||+|+.. +++.||+|++....... ......+.+|++++++++||||+++++++.+.+ ..++|
T Consensus 8 ~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~--~~~lv 83 (337)
T 1o6l_A 8 DYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIA--KDEVAHTVTESRVLQNTRHPFLTALKYAFQTHD--RLCFV 83 (337)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHH--TTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSS--EEEEE
T ss_pred EEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhh--hhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCC--EEEEE
Confidence 67788999999999999965 68899999986432111 223457889999999999999999999999877 77999
Q ss_pred EecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCCC---
Q 004979 509 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT--- 585 (721)
Q Consensus 509 ~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~~--- 585 (721)
|||+++|+|.+++.. ...+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++...
T Consensus 84 ~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~--ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 159 (337)
T 1o6l_A 84 MEYANGGELFFHLSR--ERVFTEERARFYGAEIVSALEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG 159 (337)
T ss_dssp EECCTTCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTT
T ss_pred EeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCcCCHHHEEECCCCCEEEeeccchhhcccCC
Confidence 999999999999864 346899999999999999999999998 9999999999999999999999999986421
Q ss_pred ------CCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccH
Q 004979 586 ------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQE 659 (721)
Q Consensus 586 ------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 659 (721)
.++..|+|||.+.+..++.++|||||||++|||+||+.||... +..+....+...... ++.
T Consensus 160 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~--~~~~~~~~i~~~~~~-----------~p~ 226 (337)
T 1o6l_A 160 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ--DHERLFELILMEEIR-----------FPR 226 (337)
T ss_dssp CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHCCCC-----------CCT
T ss_pred CcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCC--CHHHHHHHHHcCCCC-----------CCC
Confidence 2456799999999999999999999999999999999999643 344444444443222 223
Q ss_pred HHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 004979 660 NVLEELLVVIKNCVHPDPKQRP-----SMRGIAA 688 (721)
Q Consensus 660 ~~~~~l~~li~~Cl~~dP~~RP-----s~~evl~ 688 (721)
..+.++.+++.+||+.||++|| ++.||++
T Consensus 227 ~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~ 260 (337)
T 1o6l_A 227 TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 260 (337)
T ss_dssp TSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred CCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHc
Confidence 3456789999999999999999 8999875
No 26
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=1.9e-40 Score=353.74 Aligned_cols=250 Identities=21% Similarity=0.326 Sum_probs=198.2
Q ss_pred hhhCcCCCCceeEEEEEEecCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCC--CceEEE
Q 004979 430 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDE--PFTRMM 507 (721)
Q Consensus 430 ~ii~~lg~G~~g~Vyk~~~~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~--~~~~~l 507 (721)
++++.+|+|+||+||+|+.. ++.||||++.... .....+.+|+.++++++|||||++++++.... ....++
T Consensus 27 ~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~------~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~l 99 (322)
T 3soc_A 27 QLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD------KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWL 99 (322)
T ss_dssp EEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG------HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred hhhheecccCceEEEEEEEC-CCEEEEEEeecCc------hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEE
Confidence 67788999999999999876 7899999885432 22345667999999999999999999998754 224699
Q ss_pred EEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcC----------CCCeEeeCCCCCCeEeCCCCcEEEec
Q 004979 508 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQL----------TPPIAHRNLQSSSIYLTEDYAAKISD 577 (721)
Q Consensus 508 V~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~----------~~~IvHrDLKp~NILl~~~~~~kL~D 577 (721)
||||+++|+|.++++. ..++|..+..|+.|++.||+|||+. + |+||||||+|||++.++.+||+|
T Consensus 100 v~e~~~~g~L~~~l~~---~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~--ivH~Dlkp~Nill~~~~~~kL~D 174 (322)
T 3soc_A 100 ITAFHEKGSLSDFLKA---NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPA--ISHRDIKSKNVLLKNNLTACIAD 174 (322)
T ss_dssp EEECCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECE--EECSCCSGGGEEECTTCCEEECC
T ss_pred EEecCCCCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCC--EEeCCCChHhEEECCCCeEEEcc
Confidence 9999999999999964 3489999999999999999999998 6 99999999999999999999999
Q ss_pred cCCCCCC-----------CCCCccccchhhccc-----CCCCCCccHHHHHHHHHHHHhCCCcccCCCC-----------
Q 004979 578 FSFWNNT-----------TAAKTGSAAMELLET-----SAVDLESNVYSFGTILFEMITGRISYSIENG----------- 630 (721)
Q Consensus 578 FGla~~~-----------~~~~~~~~apE~~~~-----~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~----------- 630 (721)
||+++.. ..++..|+|||.+.+ ..++.++|||||||++|||+||+.||.....
T Consensus 175 Fg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~ 254 (322)
T 3soc_A 175 FGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIG 254 (322)
T ss_dssp CTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHC
T ss_pred CCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhc
Confidence 9998421 234567999999876 3556788999999999999999999964321
Q ss_pred ---CHHHHHHHHhhcCCCCccccCCcccc--ccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcC
Q 004979 631 ---SLENWASEYLKGEQPLKDIVDPTLKS--FQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAME 697 (721)
Q Consensus 631 ---~~~~~~~~~~~~~~~~~~~~d~~l~~--~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 697 (721)
....+........ ..+.+.. .....+.++.+|+.+||+.||++|||+.||++.|+++.+..
T Consensus 255 ~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~~ 320 (322)
T 3soc_A 255 QHPSLEDMQEVVVHKK------KRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRLT 320 (322)
T ss_dssp SSCCHHHHHHHHTTSC------CCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred cCCchhhhhhhhhccc------CCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 1222222221111 1111111 12345678999999999999999999999999999987653
No 27
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.1e-40 Score=360.74 Aligned_cols=271 Identities=24% Similarity=0.368 Sum_probs=208.0
Q ss_pred hhhhCcCCCCceeEEEEEEec--------CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcC-CCCccceEeEEEec
Q 004979 429 SNIIGSFSDGTVGTVYKGTLS--------SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEE 499 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~~--------~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l-~H~nIv~l~g~~~~ 499 (721)
+.+.+.||+|+||+||+|+.. .+..||||++.... .....+.+.+|+++++++ +|||||++++++..
T Consensus 71 y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 146 (382)
T 3tt0_A 71 LVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDA----TEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ 146 (382)
T ss_dssp EEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred eEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeecccc----CHHHHHHHHHHHHHHHHhcCCchhhhheeeecc
Confidence 367788999999999999852 23568999876432 233456799999999999 99999999999988
Q ss_pred CCCceEEEEEecCCCCChhhhhhhcc--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCe
Q 004979 500 DEPFTRMMVFEYSPNGSLFEHLHIQE--------------AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSI 565 (721)
Q Consensus 500 ~~~~~~~lV~Ey~~~GsL~~~l~~~~--------------~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NI 565 (721)
.+ ..++||||+++|+|.+++.... ...+++..+..|+.||+.||+|||+.+ |+||||||+||
T Consensus 147 ~~--~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dlkp~NI 222 (382)
T 3tt0_A 147 DG--PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAARNV 222 (382)
T ss_dssp SS--SCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGE
T ss_pred CC--ceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC--EecCCCCcceE
Confidence 77 5699999999999999997543 245999999999999999999999998 99999999999
Q ss_pred EeCCCCcEEEeccCCCCCCCC-----------CCccccchhhcccCCCCCCccHHHHHHHHHHHHh-CCCcccCCCCCHH
Q 004979 566 YLTEDYAAKISDFSFWNNTTA-----------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLE 633 (721)
Q Consensus 566 Ll~~~~~~kL~DFGla~~~~~-----------~~~~~~apE~~~~~~~s~ksDVwSfGvvL~Ellt-G~~P~~~~~~~~~ 633 (721)
|+++++.+||+|||+++.... ++..|+|||.+.+..++.++|||||||++|||+| |+.||... ...
T Consensus 223 ll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~--~~~ 300 (382)
T 3tt0_A 223 LVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV--PVE 300 (382)
T ss_dssp EECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC--CHH
T ss_pred EEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC--CHH
Confidence 999999999999999864321 2246899999999999999999999999999999 99999633 334
Q ss_pred HHHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCChhHHHHH
Q 004979 634 NWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPDGATPKLSPLWWAEL 713 (721)
Q Consensus 634 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~p~~~~~~~~~l 713 (721)
+.......+... ..+..++.++.+++.+||+.||++||++.||++.|+++.............+.+|.+.
T Consensus 301 ~~~~~~~~~~~~----------~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~~~~~~~~~~~~~~~ 370 (382)
T 3tt0_A 301 ELFKLLKEGHRM----------DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSNQEMGYYHHHHHHDY 370 (382)
T ss_dssp HHHHHHHTTCCC----------CCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSCSCC------------
T ss_pred HHHHHHHcCCCC----------CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhcCCCCCCCccccccC
Confidence 444333332111 1122345678999999999999999999999999999999888777777777787777
Q ss_pred Hhhhcc
Q 004979 714 EILSSE 719 (721)
Q Consensus 714 ~~~~~~ 719 (721)
++.+.|
T Consensus 371 ~~~~~~ 376 (382)
T 3tt0_A 371 DIPTTE 376 (382)
T ss_dssp ------
T ss_pred CCCCCC
Confidence 766554
No 28
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=2.6e-40 Score=350.44 Aligned_cols=246 Identities=20% Similarity=0.280 Sum_probs=201.5
Q ss_pred hhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEEEE
Q 004979 430 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 508 (721)
Q Consensus 430 ~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~lV 508 (721)
.+.+.+|+|+||+||+|+.. ++..||+|++... .....+.|.+|++++++++||||+++++++.+.+ ..++|
T Consensus 13 ~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~-----~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv 85 (310)
T 3s95_A 13 IHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRF-----DEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDK--RLNFI 85 (310)
T ss_dssp EEEEEEECCSSEEEEEEEETTTCCEEEEEEESCC-----CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETT--EEEEE
T ss_pred eccceecCCCCEEEEEEEECCCCcEEEEEEeccC-----CHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCC--eeEEE
Confidence 56678999999999999965 6888999987432 2334578999999999999999999999999877 67999
Q ss_pred EecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCC----
Q 004979 509 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT---- 584 (721)
Q Consensus 509 ~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~---- 584 (721)
|||+++|+|.+++.. ....+++..+..|+.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++..
T Consensus 86 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~--ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 162 (310)
T 3s95_A 86 TEYIKGGTLRGIIKS-MDSQYPWSQRVSFAKDIASGMAYLHSMN--IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEK 162 (310)
T ss_dssp EECCTTCBHHHHHHH-CCTTSCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSTTSEEECTTSCEEECCCTTCEECC---
T ss_pred EEecCCCcHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHhCC--ccCCCCCcCeEEECCCCCEEEeecccceeccccc
Confidence 999999999999964 3456999999999999999999999998 999999999999999999999999987532
Q ss_pred -------------------CCCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHH---HHHHHHhhc
Q 004979 585 -------------------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLE---NWASEYLKG 642 (721)
Q Consensus 585 -------------------~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~---~~~~~~~~~ 642 (721)
..++..|+|||.+.+..++.++|||||||++|||++|..||........ ........
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~- 241 (310)
T 3s95_A 163 TQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLD- 241 (310)
T ss_dssp -----------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHH-
T ss_pred ccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhcccc-
Confidence 2355679999999999999999999999999999999998853211100 00000000
Q ss_pred CCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCC
Q 004979 643 EQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEP 698 (721)
Q Consensus 643 ~~~~~~~~d~~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 698 (721)
...+..++.++.+++.+||+.||++||++.|+++.|+++.....
T Consensus 242 ------------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~~ 285 (310)
T 3s95_A 242 ------------RYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHLA 285 (310)
T ss_dssp ------------HTCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred ------------ccCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhcc
Confidence 01123344678899999999999999999999999999887643
No 29
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=3.4e-40 Score=352.29 Aligned_cols=250 Identities=21% Similarity=0.317 Sum_probs=204.1
Q ss_pred hhhhCcCCCCceeEEEEEEec----CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCce
Q 004979 429 SNIIGSFSDGTVGTVYKGTLS----SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFT 504 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~~----~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~ 504 (721)
+++.+.+|+|+||+||+|+.. .+..||||++.... .....+.|.+|++++++++||||+++++++.+.+ .
T Consensus 51 y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~ 124 (325)
T 3kul_A 51 IHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGY----TERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGR--L 124 (325)
T ss_dssp EEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTC----CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGG--C
T ss_pred eEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCC----CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC--c
Confidence 367788999999999999974 34469999886432 2334578999999999999999999999998766 5
Q ss_pred EEEEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCC
Q 004979 505 RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT 584 (721)
Q Consensus 505 ~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~ 584 (721)
.++||||+++|+|.++++. ....+++..+..|+.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 125 ~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~~--ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 201 (325)
T 3kul_A 125 AMIVTEYMENGSLDTFLRT-HDGQFTIMQLVGMLRGVGAGMRYLSDLG--YVHRDLAARNVLVDSNLVCKVSDFGLSRVL 201 (325)
T ss_dssp CEEEEECCTTCBHHHHHHT-TTTCSCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECTTCCEEECCCSSCEEC
T ss_pred cEEEeeCCCCCcHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCC--eeCCCCCcceEEECCCCCEEECCCCccccc
Confidence 6999999999999999863 3356999999999999999999999998 999999999999999999999999998643
Q ss_pred CC------------CCccccchhhcccCCCCCCccHHHHHHHHHHHHh-CCCcccCCCCCHHHHHHHHhhcCCCCccccC
Q 004979 585 TA------------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVD 651 (721)
Q Consensus 585 ~~------------~~~~~~apE~~~~~~~s~ksDVwSfGvvL~Ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d 651 (721)
.. ++..|+|||.+.+..++.++|||||||++|||++ |+.||... ...+.......+...
T Consensus 202 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~--~~~~~~~~~~~~~~~------ 273 (325)
T 3kul_A 202 EDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNM--TNRDVISSVEEGYRL------ 273 (325)
T ss_dssp C----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTS--CHHHHHHHHHTTCCC------
T ss_pred ccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccC--CHHHHHHHHHcCCCC------
Confidence 21 1235999999998899999999999999999999 99999533 333333333322111
Q ss_pred CccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCCC
Q 004979 652 PTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPD 699 (721)
Q Consensus 652 ~~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~ 699 (721)
..+..++.++.+++.+||+.||++||++.||++.|+.+.+....
T Consensus 274 ----~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~~ 317 (325)
T 3kul_A 274 ----PAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPES 317 (325)
T ss_dssp ----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC-
T ss_pred ----CCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCccc
Confidence 11234557889999999999999999999999999998876543
No 30
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=3.3e-40 Score=341.65 Aligned_cols=251 Identities=22% Similarity=0.363 Sum_probs=204.2
Q ss_pred hhhCcCCCCceeEEEEEEecCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEEEEE
Q 004979 430 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 509 (721)
Q Consensus 430 ~ii~~lg~G~~g~Vyk~~~~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~lV~ 509 (721)
++.+.+|+|+||+||+|+.. +..+|||++..... .....+.|.+|++++++++||||+++++++.+.+....++||
T Consensus 13 ~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (271)
T 3kmu_A 13 NFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDW---STRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLIT 88 (271)
T ss_dssp EEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTC---CHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEE
T ss_pred HHHHHhcCCCcceEEEEEEC-CeeEEEEEeccccc---CHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeee
Confidence 67788999999999999986 78899998875432 233456799999999999999999999999876333679999
Q ss_pred ecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCC----C
Q 004979 510 EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT----T 585 (721)
Q Consensus 510 Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~----~ 585 (721)
||+++|+|.+++.......+++..+..|+.|++.||+|||+.+++|+||||||+|||+++++.+||+|||+.... .
T Consensus 89 e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~~~~ 168 (271)
T 3kmu_A 89 HWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSPGR 168 (271)
T ss_dssp ECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSCTTC
T ss_pred cccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCcceeEEeccceeeecccCc
Confidence 999999999999765555699999999999999999999998888999999999999999999999988875432 2
Q ss_pred CCCccccchhhcccCCCCC---CccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHHH
Q 004979 586 AAKTGSAAMELLETSAVDL---ESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVL 662 (721)
Q Consensus 586 ~~~~~~~apE~~~~~~~s~---ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 662 (721)
.++..|+|||.+.+..++. ++|||||||++|||+||+.||... ...+........... ...+..++
T Consensus 169 ~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~--~~~~~~~~~~~~~~~---------~~~~~~~~ 237 (271)
T 3kmu_A 169 MYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADL--SNMEIGMKVALEGLR---------PTIPPGIS 237 (271)
T ss_dssp BSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTS--CHHHHHHHHHHSCCC---------CCCCTTCC
T ss_pred cCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCcccc--ChHHHHHHHHhcCCC---------CCCCCCCC
Confidence 3466899999987665544 799999999999999999999633 233333333322111 01223445
Q ss_pred HHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhh
Q 004979 663 EELLVVIKNCVHPDPKQRPSMRGIAAKLKEITA 695 (721)
Q Consensus 663 ~~l~~li~~Cl~~dP~~RPs~~evl~~L~~i~~ 695 (721)
.++.+++.+||+.||++|||+.|+++.|+++.+
T Consensus 238 ~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 238 PHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 678999999999999999999999999998764
No 31
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=8.9e-40 Score=349.42 Aligned_cols=239 Identities=21% Similarity=0.344 Sum_probs=200.6
Q ss_pred hhhhCcCCCCceeEEEEEEe-cCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEEE
Q 004979 429 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 507 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~-~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~l 507 (721)
+++++.+|+|+||.||+|+. .+++.||||++..... .....+.+.+|+++|++++||||+++++++...+ ..++
T Consensus 17 y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~---~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~--~~~l 91 (328)
T 3fe3_A 17 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQL---NPTSLQKLFREVRIMKILNHPNIVKLFEVIETEK--TLYL 91 (328)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS---CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEE
T ss_pred EEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcC---CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC--EEEE
Confidence 46788999999999999996 5789999999865432 2334567899999999999999999999998876 6799
Q ss_pred EEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCC---
Q 004979 508 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT--- 584 (721)
Q Consensus 508 V~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~--- 584 (721)
||||+++|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 92 v~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~al~~lH~~~--ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 167 (328)
T 3fe3_A 92 IMEYASGGEVFDYLVAH--GRMKEKEARSKFRQIVSAVQYCHQKR--IVHRDLKAENLLLDADMNIKIADFGFSNEFTVG 167 (328)
T ss_dssp EECCCTTCBHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECTTSCEEECSTTCCGGGSSS
T ss_pred EEECCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC--EeccCCCHHHEEEcCCCCEEEeeccCceecCCC
Confidence 99999999999998643 46899999999999999999999998 999999999999999999999999998632
Q ss_pred -----CCCCccccchhhcccCCCC-CCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004979 585 -----TAAKTGSAAMELLETSAVD-LESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 658 (721)
Q Consensus 585 -----~~~~~~~~apE~~~~~~~s-~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 658 (721)
..++..|+|||.+.+..++ .++||||+||++|||+||+.||.. .+..+....+..+.....
T Consensus 168 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~--~~~~~~~~~i~~~~~~~p----------- 234 (328)
T 3fe3_A 168 GKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG--QNLKELRERVLRGKYRIP----------- 234 (328)
T ss_dssp CGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCC--SSHHHHHHHHHHCCCCCC-----------
T ss_pred CccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCC--CCHHHHHHHHHhCCCCCC-----------
Confidence 2356679999999888775 789999999999999999999963 344555555554433221
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004979 659 ENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 689 (721)
Q Consensus 659 ~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 689 (721)
...+.++.+++.+||+.||++|||+.|+++.
T Consensus 235 ~~~s~~~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 235 FYMSTDCENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp TTSCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred CCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 2244678899999999999999999999863
No 32
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=2.7e-40 Score=369.48 Aligned_cols=246 Identities=22% Similarity=0.366 Sum_probs=204.5
Q ss_pred hhhCcCCCCceeEEEEEEecCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEEEEE
Q 004979 430 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 509 (721)
Q Consensus 430 ~ii~~lg~G~~g~Vyk~~~~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~lV~ 509 (721)
++.+.+|+|+||+||+|++.++..||||++..... ..+.|.+|+++|++++|||||++++++.. + ..++||
T Consensus 191 ~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~------~~~~~~~E~~~l~~l~h~~iv~l~~~~~~-~--~~~lv~ 261 (454)
T 1qcf_A 191 KLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSM------SVEAFLAEANVMKTLQHDKLVKLHAVVTK-E--PIYIIT 261 (454)
T ss_dssp EEEEEEECCSSEEEEEEEETTTEEEEEEEECTTSB------CHHHHHHHHHHHTTCCCTTBCCEEEEECS-S--SCEEEE
T ss_pred EEEEEcccCCceEEEEEEECCccEEEEEEecCCCc------cHHHHHHHHHHHhhCCCCCEeeEEEEEeC-C--ccEEEE
Confidence 66788999999999999998888999999864321 24679999999999999999999999873 3 468999
Q ss_pred ecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCCCC---
Q 004979 510 EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA--- 586 (721)
Q Consensus 510 Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~~~--- 586 (721)
||+++|+|.++++......+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++....
T Consensus 262 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~--ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~ 339 (454)
T 1qcf_A 262 EFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN--YIHRDLRAANILVSASLVCKIADFGLARVIEDNEY 339 (454)
T ss_dssp CCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT--CCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHH
T ss_pred eecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC--ccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCce
Confidence 9999999999997544456899999999999999999999998 99999999999999999999999999864321
Q ss_pred -------CCccccchhhcccCCCCCCccHHHHHHHHHHHHh-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004979 587 -------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 658 (721)
Q Consensus 587 -------~~~~~~apE~~~~~~~s~ksDVwSfGvvL~Ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 658 (721)
.+..|+|||.+....++.++|||||||++|||+| |+.||... ...+....+..+.. . ..+
T Consensus 340 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~--~~~~~~~~i~~~~~-~---------~~~ 407 (454)
T 1qcf_A 340 TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGM--SNPEVIRALERGYR-M---------PRP 407 (454)
T ss_dssp HTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC--CHHHHHHHHHHTCC-C---------CCC
T ss_pred eccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCC--CHHHHHHHHHcCCC-C---------CCC
Confidence 2346999999998999999999999999999999 99999633 33333333333211 1 112
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCC
Q 004979 659 ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEP 698 (721)
Q Consensus 659 ~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 698 (721)
..++.++.++|.+||+.||++|||+.+|++.|+++.....
T Consensus 408 ~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~~~ 447 (454)
T 1qcf_A 408 ENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTATE 447 (454)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSSSC
T ss_pred CCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhccc
Confidence 3456789999999999999999999999999999876543
No 33
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=2e-39 Score=345.80 Aligned_cols=253 Identities=20% Similarity=0.267 Sum_probs=205.1
Q ss_pred CCCCHHHHHHHHhh---------hhhhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHh
Q 004979 414 PKLKRSELEAACED---------FSNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLS 483 (721)
Q Consensus 414 ~~~~~~~l~~~~~~---------~~~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~ 483 (721)
+.++.+++..+++. +++....+|+|+||.||+|+.. +|+.||||++...... ..+.+.+|+.+++
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~-----~~~~~~~E~~~l~ 97 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQ-----RRELLFNEVVIMR 97 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCC-----SHHHHHHHHHHHT
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchh-----HHHHHHHHHHHHH
Confidence 56778888887764 2344567899999999999976 7899999998654322 2356889999999
Q ss_pred cCCCCccceEeEEEecCCCceEEEEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCC
Q 004979 484 KVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSS 563 (721)
Q Consensus 484 ~l~H~nIv~l~g~~~~~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~ 563 (721)
+++||||+++++++...+ ..++||||+++|+|.+++.. ..+++..+..++.|++.||+|||+.+ |+||||||+
T Consensus 98 ~l~h~niv~~~~~~~~~~--~~~lv~e~~~~~~L~~~l~~---~~l~~~~~~~i~~qi~~~L~~LH~~~--ivH~Dlkp~ 170 (321)
T 2c30_A 98 DYQHFNVVEMYKSYLVGE--ELWVLMEFLQGGALTDIVSQ---VRLNEEQIATVCEAVLQALAYLHAQG--VIHRDIKSD 170 (321)
T ss_dssp TCCCTTBCCEEEEEEETT--EEEEEECCCCSCBHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGG
T ss_pred hCCCCCcceEEEEEEECC--EEEEEEecCCCCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHH
Confidence 999999999999998877 67999999999999999852 46999999999999999999999988 999999999
Q ss_pred CeEeCCCCcEEEeccCCCCCC---------CCCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHH
Q 004979 564 SIYLTEDYAAKISDFSFWNNT---------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLEN 634 (721)
Q Consensus 564 NILl~~~~~~kL~DFGla~~~---------~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~ 634 (721)
|||++.++.+||+|||+++.. ..++..|+|||.+.+..++.++|||||||++|||+||+.||... ...+
T Consensus 171 NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~--~~~~ 248 (321)
T 2c30_A 171 SILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSD--SPVQ 248 (321)
T ss_dssp GEEECTTCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTS--CHHH
T ss_pred HEEECCCCcEEEeeeeeeeecccCccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC--CHHH
Confidence 999999999999999987532 23456799999999999999999999999999999999999643 3333
Q ss_pred HHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004979 635 WASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 688 (721)
Q Consensus 635 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 688 (721)
..........+. . ......+.++.+++.+||+.||++||++.|+++
T Consensus 249 ~~~~~~~~~~~~-------~-~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 294 (321)
T 2c30_A 249 AMKRLRDSPPPK-------L-KNSHKVSPVLRDFLERMLVRDPQERATAQELLD 294 (321)
T ss_dssp HHHHHHHSSCCC-------C-TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HHHHHhcCCCCC-------c-CccccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 333333221111 0 112234567899999999999999999999986
No 34
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1.1e-39 Score=338.30 Aligned_cols=244 Identities=20% Similarity=0.356 Sum_probs=203.4
Q ss_pred hhhCcCCCCceeEEEEEEecCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEEEEE
Q 004979 430 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 509 (721)
Q Consensus 430 ~ii~~lg~G~~g~Vyk~~~~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~lV~ 509 (721)
++++.+|+|+||+||+|+..++..||+|++...... .+++.+|++++++++||||+++++++.+.+ ..++||
T Consensus 13 ~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~------~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~ 84 (269)
T 4hcu_A 13 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS------EEDFIEEAEVMMKLSHPKLVQLYGVCLEQA--PICLVF 84 (269)
T ss_dssp EEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSBC------HHHHHHHHHHHHTCCCTTBCCEEEEECSSS--SEEEEE
T ss_pred eeeheecCCCccEEEEEEecCCCeEEEEEecccccC------HHHHHHHHHHHHhCCCCCEeeEEEEEecCC--ceEEEE
Confidence 677889999999999999988889999988643321 256899999999999999999999998876 579999
Q ss_pred ecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCCC----
Q 004979 510 EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT---- 585 (721)
Q Consensus 510 Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~~---- 585 (721)
||+++|+|.+++.. ....+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 85 e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~--i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 161 (269)
T 4hcu_A 85 EFMEHGCLSDYLRT-QRGLFAAETLLGMCLDVCEGMAYLEEAC--VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY 161 (269)
T ss_dssp ECCTTCBHHHHHHT-TTTCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHH
T ss_pred EeCCCCcHHHHHHh-cCcccCHHHHHHHHHHHHHHHHHHHhCC--eecCCcchheEEEcCCCCEEecccccccccccccc
Confidence 99999999999864 3456899999999999999999999998 9999999999999999999999999876332
Q ss_pred ------CCCccccchhhcccCCCCCCccHHHHHHHHHHHHh-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004979 586 ------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 658 (721)
Q Consensus 586 ------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~Ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 658 (721)
.++..|+|||.+....++.++||||+||++|||+| |+.||... ...+.......+.... .+
T Consensus 162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~--~~~~~~~~~~~~~~~~----------~~ 229 (269)
T 4hcu_A 162 TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENR--SNSEVVEDISTGFRLY----------KP 229 (269)
T ss_dssp HSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC--CHHHHHHHHHTTCCCC----------CC
T ss_pred ccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCC--CHHHHHHHHhcCccCC----------CC
Confidence 12346999999998999999999999999999999 99999633 3334444433321111 11
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhc
Q 004979 659 ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAM 696 (721)
Q Consensus 659 ~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~i~~~ 696 (721)
...+.++.+++.+||+.||++||++.|+++.|+++.+.
T Consensus 230 ~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~ 267 (269)
T 4hcu_A 230 RLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267 (269)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred CcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence 22356788999999999999999999999999998764
No 35
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=1.2e-40 Score=363.28 Aligned_cols=246 Identities=25% Similarity=0.372 Sum_probs=202.2
Q ss_pred hhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEEEE
Q 004979 430 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 508 (721)
Q Consensus 430 ~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~lV 508 (721)
.+.+.+|+|+||+||+|++. ++..||||++.... .....+.|.+|+++|++++|||||++++++...+ ..++|
T Consensus 117 ~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--~~~lv 190 (377)
T 3cbl_A 117 VLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETL----PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQ--PIYIV 190 (377)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTS----CHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSS--SCEEE
T ss_pred EEeeEeccCCCCeEEEEEEecCCeEEEEEEccccC----CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCC--CcEEE
Confidence 56788999999999999976 78899999876432 2234467899999999999999999999998776 56999
Q ss_pred EecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCCCC--
Q 004979 509 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA-- 586 (721)
Q Consensus 509 ~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~~~-- 586 (721)
|||+++|+|.++++.. ...+++..+..++.||+.||+|||+.+ |+||||||+|||+++++.+||+|||+++....
T Consensus 191 ~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~~--ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~ 267 (377)
T 3cbl_A 191 MELVQGGDFLTFLRTE-GARLRVKTLLQMVGDAAAGMEYLESKC--CIHRDLAARNCLVTEKNVLKISDFGMSREEADGV 267 (377)
T ss_dssp EECCTTCBHHHHHHHH-GGGCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECTTCCEEECCGGGCEECTTSE
T ss_pred EEcCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC--cCCcccCHHHEEEcCCCcEEECcCCCceecCCCc
Confidence 9999999999999643 345899999999999999999999998 99999999999999999999999999864321
Q ss_pred ---------CCccccchhhcccCCCCCCccHHHHHHHHHHHHh-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccc
Q 004979 587 ---------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKS 656 (721)
Q Consensus 587 ---------~~~~~~apE~~~~~~~s~ksDVwSfGvvL~Ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 656 (721)
.+..|+|||.+....++.++|||||||++|||+| |+.||.... ..+.......+. .. .
T Consensus 268 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~--~~~~~~~~~~~~-~~---------~ 335 (377)
T 3cbl_A 268 YAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLS--NQQTREFVEKGG-RL---------P 335 (377)
T ss_dssp EECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSC--HHHHHHHHHTTC-CC---------C
T ss_pred eeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC--HHHHHHHHHcCC-CC---------C
Confidence 1235999999998899999999999999999999 999996432 222222222221 11 1
Q ss_pred ccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhc
Q 004979 657 FQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAM 696 (721)
Q Consensus 657 ~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~i~~~ 696 (721)
.+..++.++.++|.+||+.||++|||+.||++.|+++.+.
T Consensus 336 ~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~ 375 (377)
T 3cbl_A 336 CPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKR 375 (377)
T ss_dssp CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHhh
Confidence 2234557789999999999999999999999999998764
No 36
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=4e-40 Score=367.62 Aligned_cols=244 Identities=24% Similarity=0.407 Sum_probs=203.4
Q ss_pred hhhCcCCCCceeEEEEEEecCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEEEEE
Q 004979 430 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 509 (721)
Q Consensus 430 ~ii~~lg~G~~g~Vyk~~~~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~lV~ 509 (721)
++++.+|+|+||+||+|++. +..||||+++... ..+.|.+|+++|++++|||||++++++.+.+. ..++||
T Consensus 196 ~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~-------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~iv~ 266 (450)
T 1k9a_A 196 KLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA-------TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKG-GLYIVT 266 (450)
T ss_dssp EEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT-------TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTS-CEEEEE
T ss_pred EEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch-------HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCC-ceEEEE
Confidence 66788999999999999986 6799999886432 23579999999999999999999999876542 469999
Q ss_pred ecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCCC----
Q 004979 510 EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT---- 585 (721)
Q Consensus 510 Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~~---- 585 (721)
||+++|+|.++++......+++..++.++.||+.||+|||+++ |+||||||+|||+++++.+||+|||+++...
T Consensus 267 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~--ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 344 (450)
T 1k9a_A 267 EYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN--FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD 344 (450)
T ss_dssp ECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEECTTSCEEECCCTTCEECC----
T ss_pred EecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeCCCCCHhhEEECCCCCEEEeeCCCccccccccc
Confidence 9999999999998655556899999999999999999999998 9999999999999999999999999986332
Q ss_pred --CCCccccchhhcccCCCCCCccHHHHHHHHHHHHh-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHHH
Q 004979 586 --AAKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVL 662 (721)
Q Consensus 586 --~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~Ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 662 (721)
..+..|+|||.+....++.++|||||||++|||+| |+.||..... .+....+..+.. ...+..++
T Consensus 345 ~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~--~~~~~~i~~~~~----------~~~p~~~~ 412 (450)
T 1k9a_A 345 TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL--KDVVPRVEKGYK----------MDAPDGCP 412 (450)
T ss_dssp --CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCT--TTHHHHHHTTCC----------CCCCTTCC
T ss_pred CCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHHcCCC----------CCCCCcCC
Confidence 23457999999999999999999999999999999 9999964332 222222222211 11234456
Q ss_pred HHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhc
Q 004979 663 EELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAM 696 (721)
Q Consensus 663 ~~l~~li~~Cl~~dP~~RPs~~evl~~L~~i~~~ 696 (721)
.++.++|.+||+.||++|||+.|+++.|+++...
T Consensus 413 ~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~ 446 (450)
T 1k9a_A 413 PAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTH 446 (450)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHh
Confidence 7899999999999999999999999999998764
No 37
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=3.1e-40 Score=356.45 Aligned_cols=238 Identities=19% Similarity=0.260 Sum_probs=197.6
Q ss_pred hhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcC-CCCccceEeEEEecCCCceEEE
Q 004979 430 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPFTRMM 507 (721)
Q Consensus 430 ~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l-~H~nIv~l~g~~~~~~~~~~~l 507 (721)
++++.||+|+||+||+|+.. +++.||+|++...... .....+.+.+|.+++..+ +|||||++++++.+.+ ..|+
T Consensus 26 ~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~--~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~--~~~l 101 (353)
T 3txo_A 26 EFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVIL--QDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPD--RLFF 101 (353)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHH--HHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS--EEEE
T ss_pred EEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhc--chhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCC--EEEE
Confidence 77889999999999999965 6889999998653221 122345688999999988 7999999999998877 7899
Q ss_pred EEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCC---
Q 004979 508 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT--- 584 (721)
Q Consensus 508 V~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~--- 584 (721)
||||+++|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 102 v~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~g--ivHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~ 177 (353)
T 3txo_A 102 VMEFVNGGDLMFHIQKS--RRFDEARARFYAAEIISALMFLHDKG--IIYRDLKLDNVLLDHEGHCKLADFGMCKEGICN 177 (353)
T ss_dssp EEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCCGGGEEECTTSCEEECCCTTCBCSCC-
T ss_pred EEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC--CcccCCCHHHEEECCCCCEEEccccceeecccC
Confidence 99999999999998643 56999999999999999999999998 999999999999999999999999998642
Q ss_pred ------CCCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004979 585 ------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 658 (721)
Q Consensus 585 ------~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 658 (721)
..++..|+|||.+.+..++.++|||||||++|||+||+.||... +..+....+..+...+ +
T Consensus 178 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~--~~~~~~~~i~~~~~~~-----------p 244 (353)
T 3txo_A 178 GVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAE--NEDDLFEAILNDEVVY-----------P 244 (353)
T ss_dssp --------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHCCCCC-----------C
T ss_pred CccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCC--CHHHHHHHHHcCCCCC-----------C
Confidence 23566899999999889999999999999999999999999643 4445555555543222 2
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCH------HHHHH
Q 004979 659 ENVLEELLVVIKNCVHPDPKQRPSM------RGIAA 688 (721)
Q Consensus 659 ~~~~~~l~~li~~Cl~~dP~~RPs~------~evl~ 688 (721)
...+.++.+++.+||+.||++||++ .|+++
T Consensus 245 ~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 245 TWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred CCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 2344678899999999999999998 66654
No 38
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=1.1e-39 Score=343.80 Aligned_cols=238 Identities=21% Similarity=0.297 Sum_probs=196.3
Q ss_pred hhhhCcCCCCceeEEEEEEe-cCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEEE
Q 004979 429 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 507 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~-~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~l 507 (721)
+++++.+|+|+||+||+|+. .+++.||||++....... .+.+.+|+.++++++||||+++++++...+ ..++
T Consensus 22 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-----~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~l 94 (297)
T 3fxz_A 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK-----KELIINEILVMRENKNPNIVNYLDSYLVGD--ELWV 94 (297)
T ss_dssp BCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSC-----HHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEE
T ss_pred eeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccH-----HHHHHHHHHHHhcCCCCCCCeEeEEEEECC--EEEE
Confidence 46778899999999999985 578899999886543222 356889999999999999999999998877 6799
Q ss_pred EEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCC---
Q 004979 508 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT--- 584 (721)
Q Consensus 508 V~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~--- 584 (721)
||||+++|+|.+++.. ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++...
T Consensus 95 v~e~~~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 169 (297)
T 3fxz_A 95 VMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSNQ--VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE 169 (297)
T ss_dssp EEECCTTCBHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTCCEEECCCTTCEECCST
T ss_pred EEECCCCCCHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCC--ceeCCCCHHHEEECCCCCEEEeeCCCceecCCc
Confidence 9999999999999864 35899999999999999999999998 999999999999999999999999987532
Q ss_pred ------CCCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004979 585 ------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 658 (721)
Q Consensus 585 ------~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 658 (721)
..++..|+|||.+.+..++.++|||||||++|||+||+.||.... .............+. . ..+
T Consensus 170 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~--~~~~~~~~~~~~~~~--~------~~~ 239 (297)
T 3fxz_A 170 QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNEN--PLRALYLIATNGTPE--L------QNP 239 (297)
T ss_dssp TCCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSC--HHHHHHHHHHHCSCC--C------SCG
T ss_pred ccccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHhCCCCC--C------CCc
Confidence 234567999999999999999999999999999999999996432 222222222221110 0 122
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004979 659 ENVLEELLVVIKNCVHPDPKQRPSMRGIAA 688 (721)
Q Consensus 659 ~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 688 (721)
...+.++.+++.+||+.||++|||+.|+++
T Consensus 240 ~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 240 EKLSAIFRDFLNRCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp GGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred cccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 345677899999999999999999999976
No 39
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=1.7e-40 Score=349.24 Aligned_cols=252 Identities=23% Similarity=0.340 Sum_probs=199.9
Q ss_pred hhhhCcCCCCceeEEEEEEe-----cCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCc
Q 004979 429 SNIIGSFSDGTVGTVYKGTL-----SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPF 503 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~-----~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~ 503 (721)
+++++.+|+|+||+||+|++ .++..||||++.... ....+.|.+|++++++++||||+++++++...+..
T Consensus 12 ~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 86 (295)
T 3ugc_A 12 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST-----EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR 86 (295)
T ss_dssp EEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCC-----HHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHT
T ss_pred hhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCC-----HHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCC
Confidence 47888999999999999985 367889999886432 23356799999999999999999999998754332
Q ss_pred eEEEEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCC
Q 004979 504 TRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN 583 (721)
Q Consensus 504 ~~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~ 583 (721)
..++||||+++|+|.+++... ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 87 ~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~ 163 (295)
T 3ugc_A 87 NLKLIMEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVENENRVKIGDFGLTKV 163 (295)
T ss_dssp SCEEEEECCTTCBHHHHHHHC-GGGCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEEEETTEEEECCCCSCC-
T ss_pred ceEEEEEeCCCCCHHHHHHhc-ccccCHHHHHHHHHHHHHHHHHHhcCC--cccCCCCHhhEEEcCCCeEEEccCccccc
Confidence 569999999999999999643 345899999999999999999999988 99999999999999999999999999864
Q ss_pred CCC------------CCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHH-------------HHHH
Q 004979 584 TTA------------AKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLEN-------------WASE 638 (721)
Q Consensus 584 ~~~------------~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~-------------~~~~ 638 (721)
... ++..|+|||.+.+..++.++|||||||++|||+||..|+......... ....
T Consensus 164 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (295)
T 3ugc_A 164 LPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIE 243 (295)
T ss_dssp ------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHH
T ss_pred ccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHH
Confidence 321 223489999999999999999999999999999999988522110000 0111
Q ss_pred HhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcC
Q 004979 639 YLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAME 697 (721)
Q Consensus 639 ~~~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 697 (721)
.... ......+..++.++.+++.+||+.||++|||+.|+++.|+++.+..
T Consensus 244 ~~~~---------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~l 293 (295)
T 3ugc_A 244 LLKN---------NGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 293 (295)
T ss_dssp HHHT---------TCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred HHhc---------cCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhc
Confidence 1111 0111223455678999999999999999999999999999987654
No 40
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=1.4e-40 Score=360.98 Aligned_cols=275 Identities=12% Similarity=0.146 Sum_probs=203.9
Q ss_pred hhhhCcCCCCceeEEEEEEecC------CcEEEEEEeeeccccchh------hHHHHHHHHHHHHHhcCCCCccceEeEE
Q 004979 429 SNIIGSFSDGTVGTVYKGTLSS------GVEIAVTSTSVKSRADWS------KNLESQFRKKIDTLSKVNHKNFVNLIGY 496 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~~~------~~~vavk~~~~~~~~~~~------~~~~~~f~~Ei~~l~~l~H~nIv~l~g~ 496 (721)
+++.+.||+|+||+||+|++.. ++.||||++......... ......+.+|+..+..++||||++++++
T Consensus 37 y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~ 116 (364)
T 3op5_A 37 WKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGS 116 (364)
T ss_dssp EEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEEEE
T ss_pred EEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEEee
Confidence 4678899999999999998764 367999987644321100 0011235567778889999999999999
Q ss_pred EecCC--CceEEEEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeC--CCCc
Q 004979 497 CEEDE--PFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLT--EDYA 572 (721)
Q Consensus 497 ~~~~~--~~~~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~--~~~~ 572 (721)
+.... ....++||||+ +|+|.+++.. ....+++..++.|+.||+.||+|||+.+ |+||||||+|||++ .++.
T Consensus 117 ~~~~~~~~~~~~lv~e~~-g~~L~~~~~~-~~~~l~~~~~~~i~~qi~~~l~~lH~~~--iiHrDlkp~Nill~~~~~~~ 192 (364)
T 3op5_A 117 GLHDKNGKSYRFMIMDRF-GSDLQKIYEA-NAKRFSRKTVLQLSLRILDILEYIHEHE--YVHGDIKASNLLLNYKNPDQ 192 (364)
T ss_dssp EEEEETTEEEEEEEEECE-EEEHHHHHHH-TTSCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEEESSCTTC
T ss_pred eeeccCCcceEEEEEeCC-CCCHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC--eEEecCCHHHEEEecCCCCe
Confidence 87642 13579999999 9999999864 3457999999999999999999999998 99999999999999 8899
Q ss_pred EEEeccCCCCCC----------------CCCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHH-
Q 004979 573 AKISDFSFWNNT----------------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENW- 635 (721)
Q Consensus 573 ~kL~DFGla~~~----------------~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~- 635 (721)
+||+|||+++.. ..++..|+|||.+.+..++.++|||||||++|||+||+.||.....+....
T Consensus 193 ~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~~~ 272 (364)
T 3op5_A 193 VYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVR 272 (364)
T ss_dssp EEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHH
T ss_pred EEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCHHHHH
Confidence 999999998422 115668999999999999999999999999999999999997433322111
Q ss_pred -HHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCChhHHHHHH
Q 004979 636 -ASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPDGATPKLSPLWWAELE 714 (721)
Q Consensus 636 -~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~p~~~~~~~~~l~ 714 (721)
...... ..+..++++.+. ...++.++.+++..||+.||++||++.+|++.|+++...... +...+++|+..+
T Consensus 273 ~~~~~~~--~~~~~~~~~~~~--~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~~~---~~~~~~dw~~~~ 345 (364)
T 3op5_A 273 DSKIRYR--ENIASLMDKCFP--AANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIGS---KDDGKLDLSVVE 345 (364)
T ss_dssp HHHHHHH--HCHHHHHHHHSC--TTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTC---CCCCCCCC----
T ss_pred HHHHHhh--hhHHHHHHHhcc--cccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCC---CcCCccceEecc
Confidence 111111 111111111110 023357899999999999999999999999999998876543 234566666443
No 41
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=1.4e-39 Score=355.98 Aligned_cols=253 Identities=18% Similarity=0.292 Sum_probs=202.3
Q ss_pred hhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcC-CCCccceEeEEEecCCCceEEE
Q 004979 430 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPFTRMM 507 (721)
Q Consensus 430 ~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l-~H~nIv~l~g~~~~~~~~~~~l 507 (721)
++++.||+|+||+||+|+.. +++.+|+|++....... ....+.+.+|..++.++ +|||||++++++.+.+ ..++
T Consensus 55 ~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~--~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~--~~~l 130 (396)
T 4dc2_A 55 DLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVND--DEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTES--RLFF 130 (396)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC------CCHHHHHHHHHHHHTTCTTBCCEEEEEECSS--EEEE
T ss_pred EEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccC--HHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECC--EEEE
Confidence 67889999999999999965 57789999987543221 22234578899999887 8999999999998877 7899
Q ss_pred EEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCC---
Q 004979 508 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT--- 584 (721)
Q Consensus 508 V~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~--- 584 (721)
||||+++|+|..++.. ...+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++..
T Consensus 131 V~E~~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~LH~~g--ivHrDLKp~NILl~~~g~ikL~DFGla~~~~~~ 206 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQR--QRKLPEEHARFYSAEISLALNYLHERG--IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 206 (396)
T ss_dssp EEECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred EEEcCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC--EEeccCCHHHEEECCCCCEEEeecceeeecccC
Confidence 9999999999999864 346999999999999999999999998 999999999999999999999999998642
Q ss_pred ------CCCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCCC------CHHH-HHHHHhhcCCCCccccC
Q 004979 585 ------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENG------SLEN-WASEYLKGEQPLKDIVD 651 (721)
Q Consensus 585 ------~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~------~~~~-~~~~~~~~~~~~~~~~d 651 (721)
..++..|+|||.+.+..++.++|||||||++|||+||+.||..... ...+ ....+......
T Consensus 207 ~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~------ 280 (396)
T 4dc2_A 207 GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR------ 280 (396)
T ss_dssp TCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCCC------
T ss_pred CCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccccC------
Confidence 2345679999999999999999999999999999999999963221 1112 22222222211
Q ss_pred CccccccHHHHHHHHHHHHHcccCCCCCCCCH------HHHHHHHHHhhhcCCCCCCCCCChhHHHHHH
Q 004979 652 PTLKSFQENVLEELLVVIKNCVHPDPKQRPSM------RGIAAKLKEITAMEPDGATPKLSPLWWAELE 714 (721)
Q Consensus 652 ~~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~------~evl~~L~~i~~~~~~~~~p~~~~~~~~~l~ 714 (721)
++...+.++.+|+.+||+.||++||++ .||++ +|++..++|+.++
T Consensus 281 -----~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~-------------Hpff~~i~w~~l~ 331 (396)
T 4dc2_A 281 -----IPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQG-------------HPFFRNVDWDMME 331 (396)
T ss_dssp -----CCTTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHH-------------STTTTTCCHHHHH
T ss_pred -----CCCcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhc-------------CccccCCCHHHHH
Confidence 223445678999999999999999986 45543 6777777777765
No 42
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=2e-39 Score=343.59 Aligned_cols=251 Identities=25% Similarity=0.455 Sum_probs=201.1
Q ss_pred hhhCcCCCCceeEEEEEEecCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEEEEE
Q 004979 430 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 509 (721)
Q Consensus 430 ~ii~~lg~G~~g~Vyk~~~~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~lV~ 509 (721)
.+.+.+|+|+||+||+|+... .+++|+++.... .....+.|.+|++++++++||||+++++++... ..++||
T Consensus 39 ~~~~~lG~G~~g~Vy~~~~~~--~~avk~~k~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---~~~lv~ 110 (307)
T 3lb7_A 39 MLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDP---TPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKD---NLAIVT 110 (307)
T ss_dssp CEEEEEEECSSCEEEEEESSS--EEEEEECCCSSC---CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS---SCEEEE
T ss_pred EEEeEecCCCCeEEEEEEECC--EEEEEEEecCCC---CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccC---cEEEEE
Confidence 567789999999999998653 578887764332 233457899999999999999999999988654 358999
Q ss_pred ecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCC-----
Q 004979 510 EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT----- 584 (721)
Q Consensus 510 Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~----- 584 (721)
||+++|+|.+++.. ....+++..+..|+.||+.||+|||+.+ |+||||||+|||+++++.+||+|||+++..
T Consensus 111 e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~~--ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~ 187 (307)
T 3lb7_A 111 QWCEGSSLYKHLHV-QETKFQMFQLIDIARQTAQGMDYLHAKN--IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSG 187 (307)
T ss_dssp ECCSSCBHHHHHHT-SCCCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCSSSEEECTTSCEEECCCCSSCC------
T ss_pred ecCCCCcHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhCC--EeeCCCChhhEEEcCCCCEEEccCCCceecccccc
Confidence 99999999999863 3457999999999999999999999998 999999999999999999999999998632
Q ss_pred ------CCCCccccchhhcc---cCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccc
Q 004979 585 ------TAAKTGSAAMELLE---TSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLK 655 (721)
Q Consensus 585 ------~~~~~~~~apE~~~---~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 655 (721)
..++..|+|||.+. ...++.++|||||||++|||+||+.||..... ..........+ . ..+.+.
T Consensus 188 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~-~~~~~~~~~~~-~-----~~~~~~ 260 (307)
T 3lb7_A 188 SQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINN-RDQIIFMVGRG-Y-----ASPDLS 260 (307)
T ss_dssp ------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCC-HHHHHHHHHHT-C-----CCCCST
T ss_pred cccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCc-HHHHHHHHhcC-C-----CCcchh
Confidence 13456799999985 66789999999999999999999999964332 22222221111 1 112222
Q ss_pred cccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCC
Q 004979 656 SFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEP 698 (721)
Q Consensus 656 ~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 698 (721)
.....++.++.+++.+||+.+|++||++.||++.|+.+....+
T Consensus 261 ~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~~p 303 (307)
T 3lb7_A 261 KLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLP 303 (307)
T ss_dssp TSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTTCC
T ss_pred hhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhhcc
Confidence 2334456789999999999999999999999999999987664
No 43
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=1.3e-39 Score=342.62 Aligned_cols=254 Identities=20% Similarity=0.345 Sum_probs=206.5
Q ss_pred hhhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEEE
Q 004979 429 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 507 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~l 507 (721)
+++++.+|+|+||+||+|+.. ++..||+|++....... ....+.|.+|++++++++||||+++++++.+.+ ..++
T Consensus 13 y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~--~~~l 88 (294)
T 4eqm_A 13 YKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREK--EETLKRFEREVHNSSQLSHQNIVSMIDVDEEDD--CYYL 88 (294)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCC--HHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSS--EEEE
T ss_pred EEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCcccc--HHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCC--eEEE
Confidence 477889999999999999954 68899999886543322 344578999999999999999999999998876 6799
Q ss_pred EEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCCC--
Q 004979 508 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT-- 585 (721)
Q Consensus 508 V~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~~-- 585 (721)
||||+++|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 89 v~e~~~g~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 164 (294)
T 4eqm_A 89 VMEYIEGPTLSEYIESH--GPLSVDTAINFTNQILDGIKHAHDMR--IVHRDIKPQNILIDSNKTLKIFDFGIAKALSET 164 (294)
T ss_dssp EEECCCSCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTSCEEECCCSSSTTC---
T ss_pred EEeCCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEECCCCCEEEEeCCCccccccc
Confidence 99999999999998643 46899999999999999999999998 9999999999999999999999999986432
Q ss_pred --------CCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccc
Q 004979 586 --------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSF 657 (721)
Q Consensus 586 --------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 657 (721)
.++..|+|||.+.+..++.++|||||||++|||+||+.||.... .............+ ......
T Consensus 165 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~--~~~~~~~~~~~~~~------~~~~~~ 236 (294)
T 4eqm_A 165 SLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGET--AVSIAIKHIQDSVP------NVTTDV 236 (294)
T ss_dssp ----------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSC--HHHHHHHHHSSCCC------CHHHHS
T ss_pred cccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC--hHHHHHHHhhccCC------Ccchhc
Confidence 24567999999999999999999999999999999999996432 22322233222111 111122
Q ss_pred cHHHHHHHHHHHHHcccCCCCCCC-CHHHHHHHHHHhhhcCC
Q 004979 658 QENVLEELLVVIKNCVHPDPKQRP-SMRGIAAKLKEITAMEP 698 (721)
Q Consensus 658 ~~~~~~~l~~li~~Cl~~dP~~RP-s~~evl~~L~~i~~~~~ 698 (721)
...++..+.+++.+||+.||++|| +++++.+.|+.+.....
T Consensus 237 ~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~~ 278 (294)
T 4eqm_A 237 RKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHENR 278 (294)
T ss_dssp CTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSSS
T ss_pred ccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhhcc
Confidence 334567889999999999999998 99999999998766543
No 44
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=1.8e-39 Score=351.50 Aligned_cols=259 Identities=18% Similarity=0.261 Sum_probs=208.7
Q ss_pred hhhhhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccch-hhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCce
Q 004979 427 DFSNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADW-SKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFT 504 (721)
Q Consensus 427 ~~~~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~-~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~ 504 (721)
+.+++.+.+|+|+||+||+|+.. ++..+|+|++........ .....+.+.+|+++|++++||||+++++++.+.+ .
T Consensus 12 ~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~--~ 89 (361)
T 2yab_A 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRT--D 89 (361)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--E
T ss_pred hceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCC--E
Confidence 44578889999999999999965 688999999876543211 1112467899999999999999999999998876 6
Q ss_pred EEEEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCC----cEEEeccCC
Q 004979 505 RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDY----AAKISDFSF 580 (721)
Q Consensus 505 ~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~----~~kL~DFGl 580 (721)
.++||||+++|+|.+++.. ...+++..+..++.||+.||+|||+.+ |+||||||+|||+++++ .+||+|||+
T Consensus 90 ~~lv~e~~~gg~L~~~l~~--~~~l~~~~~~~i~~qi~~aL~~LH~~g--ivHrDlkp~NIll~~~~~~~~~vkl~DFG~ 165 (361)
T 2yab_A 90 VVLILELVSGGELFDFLAQ--KESLSEEEATSFIKQILDGVNYLHTKK--IAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165 (361)
T ss_dssp EEEEEECCCSCBHHHHHTT--CSCCBHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEESCTTSSSCCEEECCCSS
T ss_pred EEEEEEcCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEEeCCCCCccCEEEEecCC
Confidence 7999999999999999853 456999999999999999999999998 99999999999998877 799999999
Q ss_pred CCCC--------CCCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCccccCC
Q 004979 581 WNNT--------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDP 652 (721)
Q Consensus 581 a~~~--------~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 652 (721)
++.. ..++..|+|||.+....++.++|||||||++|||++|+.||... +..+....+.........
T Consensus 166 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~--~~~~~~~~i~~~~~~~~~---- 239 (361)
T 2yab_A 166 AHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD--TKQETLANITAVSYDFDE---- 239 (361)
T ss_dssp CEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCS--SHHHHHHHHHTTCCCCCH----
T ss_pred ceEcCCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCC--CHHHHHHHHHhcCCCCCc----
Confidence 7532 23566799999999999999999999999999999999999643 334444444433221110
Q ss_pred ccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCChhHHHHH
Q 004979 653 TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPDGATPKLSPLWWAEL 713 (721)
Q Consensus 653 ~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~p~~~~~~~~~l 713 (721)
......+.++.+|+.+||..||++|||+.|+++ +|++.+..|...
T Consensus 240 ---~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~-------------hp~~~~~~~~~~ 284 (361)
T 2yab_A 240 ---EFFSQTSELAKDFIRKLLVKETRKRLTIQEALR-------------HPWITPVDTQQA 284 (361)
T ss_dssp ---HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT-------------STTTSCSSHHHH
T ss_pred ---hhccCCCHHHHHHHHHHCCCChhHCcCHHHHhc-------------CcCcCCCchhhh
Confidence 111234567899999999999999999999875 566666666554
No 45
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=2.1e-39 Score=345.00 Aligned_cols=238 Identities=20% Similarity=0.271 Sum_probs=198.5
Q ss_pred hhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEEEE
Q 004979 430 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 508 (721)
Q Consensus 430 ~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~lV 508 (721)
++++.+|+|+||+||+|+.. +++.+|+|++....... ....+.+.+|+.+++.++||||+++++++.+.+ ..++|
T Consensus 9 ~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~--~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~--~~~lv 84 (318)
T 1fot_A 9 QILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVR--LKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQ--QIFMI 84 (318)
T ss_dssp EEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHH--TTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSS--EEEEE
T ss_pred EEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh--hhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCC--EEEEE
Confidence 67888999999999999965 68899999986432211 122456889999999999999999999998876 67999
Q ss_pred EecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCC----
Q 004979 509 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT---- 584 (721)
Q Consensus 509 ~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~---- 584 (721)
|||+++|+|.+++.. ...+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++..
T Consensus 85 ~e~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~--ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~~ 160 (318)
T 1fot_A 85 MDYIEGGELFSLLRK--SQRFPNPVAKFYAAEVCLALEYLHSKD--IIYRDLKPENILLDKNGHIKITDFGFAKYVPDVT 160 (318)
T ss_dssp ECCCCSCBHHHHHHH--TSSCCHHHHHHHHHHHHHHHHHHHTTT--EECCCCCGGGEEECTTSCEEECCCSSCEECSSCB
T ss_pred EeCCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCChheEEEcCCCCEEEeecCcceecCCcc
Confidence 999999999999864 356899999999999999999999998 999999999999999999999999998633
Q ss_pred --CCCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHHH
Q 004979 585 --TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVL 662 (721)
Q Consensus 585 --~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 662 (721)
..++..|+|||.+.+..++.++|||||||++|||++|+.||... +..+....+...... ++...+
T Consensus 161 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~--~~~~~~~~i~~~~~~-----------~p~~~~ 227 (318)
T 1fot_A 161 YTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDS--NTMKTYEKILNAELR-----------FPPFFN 227 (318)
T ss_dssp CCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCS--SHHHHHHHHHHCCCC-----------CCTTSC
T ss_pred ccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCC--CHHHHHHHHHhCCCC-----------CCCCCC
Confidence 23566899999999999999999999999999999999999643 344444555444322 122345
Q ss_pred HHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 004979 663 EELLVVIKNCVHPDPKQRP-----SMRGIAA 688 (721)
Q Consensus 663 ~~l~~li~~Cl~~dP~~RP-----s~~evl~ 688 (721)
.++.+++.+||+.||++|| +++|+++
T Consensus 228 ~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 228 EDVKDLLSRLITRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp HHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred HHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence 6789999999999999999 8888875
No 46
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=1.4e-39 Score=340.63 Aligned_cols=251 Identities=26% Similarity=0.423 Sum_probs=201.1
Q ss_pred hhhhCcCCCCceeEEEEEEe-cCCcEEEEEEeeeccccchhhH--HHHHHHHHHHHHhcCCCCccceEeEEEecCCCceE
Q 004979 429 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKN--LESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTR 505 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~-~~~~~vavk~~~~~~~~~~~~~--~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~ 505 (721)
+++.+.+|+|+||+||+|+. .+++.||+|++........... ..+.+.+|++++++++||||+++++++.+..
T Consensus 21 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~---- 96 (287)
T 4f0f_A 21 IEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP---- 96 (287)
T ss_dssp EEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT----
T ss_pred ceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC----
Confidence 36778899999999999996 4788999998865433221111 1167999999999999999999999987644
Q ss_pred EEEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCc-----EEEeccCC
Q 004979 506 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYA-----AKISDFSF 580 (721)
Q Consensus 506 ~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~-----~kL~DFGl 580 (721)
++||||+++|+|.+++.. ....+++..+..++.|++.||+|||+.+++|+||||||+|||++.++. +||+|||+
T Consensus 97 ~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~ 175 (287)
T 4f0f_A 97 RMVMEFVPCGDLYHRLLD-KAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGL 175 (287)
T ss_dssp EEEEECCTTCBHHHHHHC-TTSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCTT
T ss_pred eEEEEecCCCCHHHHHhc-ccCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCCCCc
Confidence 699999999999998863 345799999999999999999999998877999999999999988776 99999999
Q ss_pred CCCCC------CCCccccchhhc--ccCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCccccCC
Q 004979 581 WNNTT------AAKTGSAAMELL--ETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDP 652 (721)
Q Consensus 581 a~~~~------~~~~~~~apE~~--~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 652 (721)
++... .++..|+|||.+ ....++.++|||||||++|||+||+.||....................
T Consensus 176 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~------- 248 (287)
T 4f0f_A 176 SQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLR------- 248 (287)
T ss_dssp CBCCSSCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSCCC-------
T ss_pred cccccccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhccCCC-------
Confidence 86432 245678999998 455678999999999999999999999976554444333333322111
Q ss_pred ccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHh
Q 004979 653 TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 693 (721)
Q Consensus 653 ~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~i 693 (721)
...+..++.++.+++.+||+.||++||++.|+++.|+++
T Consensus 249 --~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 249 --PTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp --CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred --CCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 112234557899999999999999999999999999864
No 47
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=1.7e-39 Score=336.52 Aligned_cols=246 Identities=19% Similarity=0.370 Sum_probs=202.1
Q ss_pred hhhhCcCCCCceeEEEEEEecCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEEEE
Q 004979 429 SNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 508 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~lV 508 (721)
+++++.+|+|+||+||+|+..++..||+|++...... .+++.+|++++.+++||||+++++++.+.+ ..++|
T Consensus 10 y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~------~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv 81 (268)
T 3sxs_A 10 ITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMS------EDEFFQEAQTMMKLSHPKLVKFYGVCSKEY--PIYIV 81 (268)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTBC------HHHHHHHHHHHHHCCCTTBCCEEEEECSSS--SEEEE
T ss_pred eeeeeeeccCCCceEEEEEecCceeEEEEEeccCCCc------HHHHHHHHHHHHhCCCCCEeeEEEEEccCC--ceEEE
Confidence 3677889999999999999998889999988654321 256899999999999999999999998776 57999
Q ss_pred EecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCCCC--
Q 004979 509 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA-- 586 (721)
Q Consensus 509 ~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~~~-- 586 (721)
|||+++|+|.+++... ...+++..+..|+.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 82 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~--i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 158 (268)
T 3sxs_A 82 TEYISNGCLLNYLRSH-GKGLEPSQLLEMCYDVCEGMAFLESHQ--FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQ 158 (268)
T ss_dssp EECCTTCBHHHHHHHH-GGGCCHHHHHHHHHHHHHHHHHHHHTT--EEESSCSGGGEEECTTCCEEECCTTCEEECCTTC
T ss_pred EEccCCCcHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCcCcceEEECCCCCEEEccCccceecchhh
Confidence 9999999999998643 345899999999999999999999998 99999999999999999999999998753221
Q ss_pred --------CCccccchhhcccCCCCCCccHHHHHHHHHHHHh-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccc
Q 004979 587 --------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSF 657 (721)
Q Consensus 587 --------~~~~~~apE~~~~~~~s~ksDVwSfGvvL~Ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 657 (721)
++..|+|||.+.+..++.++||||||+++|||+| |+.||... ...+.......+.... .
T Consensus 159 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~--~~~~~~~~~~~~~~~~----------~ 226 (268)
T 3sxs_A 159 YVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLY--TNSEVVLKVSQGHRLY----------R 226 (268)
T ss_dssp EEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTS--CHHHHHHHHHTTCCCC----------C
T ss_pred hhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCcccc--ChHHHHHHHHcCCCCC----------C
Confidence 2235999999998899999999999999999999 99999633 2333333333222111 1
Q ss_pred cHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcC
Q 004979 658 QENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAME 697 (721)
Q Consensus 658 ~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 697 (721)
+...+.++.+++.+||+.||++|||+.|+++.|+.+.+..
T Consensus 227 ~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~~ 266 (268)
T 3sxs_A 227 PHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREKD 266 (268)
T ss_dssp CTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC--
T ss_pred CCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhcc
Confidence 1223467889999999999999999999999999887643
No 48
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1e-39 Score=351.38 Aligned_cols=238 Identities=19% Similarity=0.334 Sum_probs=196.1
Q ss_pred hhhhCcCCCCceeEEEEEEe-cCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEEE
Q 004979 429 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 507 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~-~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~l 507 (721)
+++++.+|+|+||+||+|+. .++..||||++...... .....+.+|++++++++||||+++++++.+.+ ..++
T Consensus 12 y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~----~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~--~~~l 85 (347)
T 3zgw_A 12 YELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLG----SDLPRIKTEIEALKNLRHQHICQLYHVLETAN--KIFM 85 (347)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC-------CCHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEE
T ss_pred eEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccc----hHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCC--EEEE
Confidence 47788999999999999995 57889999998654322 12356889999999999999999999998877 6799
Q ss_pred EEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCCC--
Q 004979 508 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT-- 585 (721)
Q Consensus 508 V~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~~-- 585 (721)
||||+++|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||+++++.+||+|||++....
T Consensus 86 v~E~~~gg~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~g--ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~ 161 (347)
T 3zgw_A 86 VLEYCPGGELFDYIISQ--DRLSEEETRVVFRQIVSAVAYVHSQG--YAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGN 161 (347)
T ss_dssp EEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCCGGGEEECTTSCEEECCCTTCBC----
T ss_pred EEeCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC--eEeCCccHHHEEEcCCCCEEEEeccCcccccCC
Confidence 99999999999998643 46999999999999999999999998 9999999999999999999999999875322
Q ss_pred --------CCCccccchhhcccCCC-CCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccc
Q 004979 586 --------AAKTGSAAMELLETSAV-DLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKS 656 (721)
Q Consensus 586 --------~~~~~~~apE~~~~~~~-s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 656 (721)
.++..|+|||.+.+..+ +.++||||+||++|||+||+.||.. .+..+....+..+.....
T Consensus 162 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~--~~~~~~~~~i~~~~~~~p--------- 230 (347)
T 3zgw_A 162 KDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDD--DNVMALYKKIMRGKYDVP--------- 230 (347)
T ss_dssp ----------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCC--SSHHHHHHHHHHTCCCCC---------
T ss_pred CCccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCC--CCHHHHHHHHHcCCCCCC---------
Confidence 24567999999987775 8999999999999999999999963 344555555554433222
Q ss_pred ccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004979 657 FQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 689 (721)
Q Consensus 657 ~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 689 (721)
...+.++.+++.+||+.||++|||+.|+++.
T Consensus 231 --~~~s~~~~~li~~~L~~dP~~Rps~~eil~h 261 (347)
T 3zgw_A 231 --KWLSPSSILLLQQMLQVDPKKRISMKNLLNH 261 (347)
T ss_dssp --TTCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred --CCCCHHHHHHHHHHcccCHhHCcCHHHHhcC
Confidence 2234668889999999999999999999874
No 49
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=4.1e-39 Score=336.36 Aligned_cols=244 Identities=18% Similarity=0.350 Sum_probs=200.0
Q ss_pred hhhCcCCCCceeEEEEEEecCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEEEEE
Q 004979 430 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 509 (721)
Q Consensus 430 ~ii~~lg~G~~g~Vyk~~~~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~lV~ 509 (721)
++++.+|+|+||+||+|++.++..||+|++...... .+++.+|++++.+++||||+++++++.+.+ ..++||
T Consensus 27 ~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~------~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~ 98 (283)
T 3gen_A 27 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS------EDEFIEEAKVMMNLSHEKLVQLYGVCTKQR--PIFIIT 98 (283)
T ss_dssp EEEEECC---CEEEEEEEETTTEEEEEEEECTTSBC------HHHHHHHHHHHHTCCCTTBCCEEEEECSSS--SEEEEE
T ss_pred HhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCC------HHHHHHHHHHHhcCCCCCEeeEEEEEecCC--CeEEEE
Confidence 678899999999999999998889999988643321 256899999999999999999999998776 579999
Q ss_pred ecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCCC----
Q 004979 510 EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT---- 585 (721)
Q Consensus 510 Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~~---- 585 (721)
||+++|+|.+++... ...+++..+..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++...
T Consensus 99 e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~--i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~ 175 (283)
T 3gen_A 99 EYMANGCLLNYLREM-RHRFQTQQLLEMCKDVCEAMEYLESKQ--FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY 175 (283)
T ss_dssp CCCTTCBHHHHHHCG-GGCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHH
T ss_pred eccCCCcHHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHHCC--ccCCCCccceEEEcCCCCEEEcccccccccccccc
Confidence 999999999998642 346999999999999999999999998 9999999999999999999999999876332
Q ss_pred ------CCCccccchhhcccCCCCCCccHHHHHHHHHHHHh-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004979 586 ------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 658 (721)
Q Consensus 586 ------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~Ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 658 (721)
.++..|+|||.+....++.++|||||||++|||+| |+.||... ...+.......+.... .+
T Consensus 176 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~--~~~~~~~~~~~~~~~~----------~~ 243 (283)
T 3gen_A 176 TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERF--TNSETAEHIAQGLRLY----------RP 243 (283)
T ss_dssp HSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTS--CHHHHHHHHHTTCCCC----------CC
T ss_pred ccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCcccc--ChhHHHHHHhcccCCC----------CC
Confidence 22346999999998899999999999999999999 99999633 2333333333221111 11
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhc
Q 004979 659 ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAM 696 (721)
Q Consensus 659 ~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~i~~~ 696 (721)
...+.++.+++.+||+.||++||++.|+++.|+++...
T Consensus 244 ~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~ 281 (283)
T 3gen_A 244 HLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDE 281 (283)
T ss_dssp TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhc
Confidence 22346788999999999999999999999999998764
No 50
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=5.6e-40 Score=357.39 Aligned_cols=245 Identities=20% Similarity=0.332 Sum_probs=194.6
Q ss_pred hhhCcCCCCceeEEEEEEec----CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceE
Q 004979 430 NIIGSFSDGTVGTVYKGTLS----SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTR 505 (721)
Q Consensus 430 ~ii~~lg~G~~g~Vyk~~~~----~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~ 505 (721)
++.+.+|+|+||+||+|+.. ++..||||++.... .....+.|.+|++++++++|||||++++++.+.+ ..
T Consensus 48 ~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~ 121 (373)
T 2qol_A 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY----TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSK--PV 121 (373)
T ss_dssp CCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTC----CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS--SC
T ss_pred eeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCcc----CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCC--ce
Confidence 56678899999999999865 56779999886432 2334578999999999999999999999998776 56
Q ss_pred EEEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCCC
Q 004979 506 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT 585 (721)
Q Consensus 506 ~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~~ 585 (721)
++||||+++|+|.++++. ....+++..+..|+.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 122 ~lv~e~~~~~sL~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 198 (373)
T 2qol_A 122 MIVTEYMENGSLDSFLRK-HDAQFTVIQLVGMLRGIASGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLGRVLE 198 (373)
T ss_dssp EEEEECCTTCBHHHHHHT-TTTCSCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECTTCCEEECCC-------
T ss_pred EEEEeCCCCCcHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeCCCCCcceEEEcCCCCEEECcCccccccc
Confidence 999999999999999963 3456999999999999999999999988 9999999999999999999999999986432
Q ss_pred C------------CCccccchhhcccCCCCCCccHHHHHHHHHHHHh-CCCcccCCCCCHHHHHHHHhhcCCCCccccCC
Q 004979 586 A------------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDP 652 (721)
Q Consensus 586 ~------------~~~~~~apE~~~~~~~s~ksDVwSfGvvL~Ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 652 (721)
. ++..|+|||.+....++.++|||||||++|||++ |+.||... ...+....+..+..
T Consensus 199 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~--~~~~~~~~i~~~~~-------- 268 (373)
T 2qol_A 199 DDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEM--SNQDVIKAVDEGYR-------- 268 (373)
T ss_dssp ---------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTC--CHHHHHHHHHTTEE--------
T ss_pred cCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCC--CHHHHHHHHHcCCC--------
Confidence 1 1235999999999999999999999999999998 99999633 23333333222210
Q ss_pred ccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhh
Q 004979 653 TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITA 695 (721)
Q Consensus 653 ~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~i~~ 695 (721)
...+..++.++.+++.+||+.||++||++.||++.|+++..
T Consensus 269 --~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~ 309 (373)
T 2qol_A 269 --LPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 309 (373)
T ss_dssp --CCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred --CCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHh
Confidence 01122345678999999999999999999999999998754
No 51
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.1e-39 Score=343.36 Aligned_cols=252 Identities=25% Similarity=0.402 Sum_probs=200.6
Q ss_pred hhhCcCCCCceeEEEEEEecCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEEEEE
Q 004979 430 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 509 (721)
Q Consensus 430 ~ii~~lg~G~~g~Vyk~~~~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~lV~ 509 (721)
++.+.+|+|+||+||+|++. ++.||||++... ...+.|.+|++++++++||||+++++++.+ ..++||
T Consensus 11 ~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~-------~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~----~~~lv~ 78 (307)
T 2eva_A 11 EVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE-------SERKAFIVELRQLSRVNHPNIVKLYGACLN----PVCLVM 78 (307)
T ss_dssp EEEEEEECCSSSEEEEEEET-TEEEEEEECSST-------THHHHHHHHHHHHHHCCCTTBCCEEEBCTT----TTEEEE
T ss_pred eeeeEeecCCCceEEEEEEC-CeeEEEEEecCh-------hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC----CcEEEE
Confidence 56788899999999999976 678999987532 234679999999999999999999998864 248999
Q ss_pred ecCCCCChhhhhhhccC-CCCCHHHHHHHHHHHHHHHHHHhcCC-CCeEeeCCCCCCeEeCCCCc-EEEeccCCCCCC--
Q 004979 510 EYSPNGSLFEHLHIQEA-EHLDWAMRLRIAMGMAYCLEHMHQLT-PPIAHRNLQSSSIYLTEDYA-AKISDFSFWNNT-- 584 (721)
Q Consensus 510 Ey~~~GsL~~~l~~~~~-~~l~~~~~~~ia~~ia~gL~yLH~~~-~~IvHrDLKp~NILl~~~~~-~kL~DFGla~~~-- 584 (721)
||+++|+|.+++..... ..+++..+..++.|+++||+|||+.+ .+|+||||||+|||++.++. +||+|||++...
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~ 158 (307)
T 2eva_A 79 EYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQT 158 (307)
T ss_dssp ECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC------
T ss_pred EcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccccccccccc
Confidence 99999999999974332 35789999999999999999999832 23999999999999998876 799999997533
Q ss_pred ----CCCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHH
Q 004979 585 ----TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQEN 660 (721)
Q Consensus 585 ----~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 660 (721)
..++..|+|||.+.+..++.++|||||||++|||+||+.||................+..+ .....
T Consensus 159 ~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~----------~~~~~ 228 (307)
T 2eva_A 159 HMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRP----------PLIKN 228 (307)
T ss_dssp ------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTCCC----------CCBTT
T ss_pred ccccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcCCCC----------Ccccc
Confidence 2356689999999999999999999999999999999999975444433333222222111 11233
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCCCCCCC
Q 004979 661 VLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPDGATP 703 (721)
Q Consensus 661 ~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~p 703 (721)
++.++.+++.+||+.||++|||+.|+++.|+.+.+..+....|
T Consensus 229 ~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~~~~~ 271 (307)
T 2eva_A 229 LPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGADEP 271 (307)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGCCCTTSC
T ss_pred cCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhccCCCCc
Confidence 4567889999999999999999999999999998876654443
No 52
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=6.7e-40 Score=365.98 Aligned_cols=247 Identities=21% Similarity=0.346 Sum_probs=203.8
Q ss_pred hhhCcCCCCceeEEEEEEecCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEEEEE
Q 004979 430 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 509 (721)
Q Consensus 430 ~ii~~lg~G~~g~Vyk~~~~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~lV~ 509 (721)
++.+.+|+|+||+||+|++..+..||||++..... ..+.|.+|+++|++++|||||++++++.+ + ..++||
T Consensus 187 ~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~------~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~--~~~iv~ 257 (452)
T 1fmk_A 187 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM------SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-E--PIYIVT 257 (452)
T ss_dssp EEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSS------CHHHHHHHHHHHHHCCCTTBCCEEEEECS-S--SCEEEE
T ss_pred eeeeeecCCCCeEEEEEEECCCceEEEEEeccCCC------CHHHHHHHHHHHHhCCCCCEeeEEEEEcC-C--ceEEEe
Confidence 56778999999999999998888899998864321 13579999999999999999999999976 3 458999
Q ss_pred ecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCCCC---
Q 004979 510 EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA--- 586 (721)
Q Consensus 510 Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~~~--- 586 (721)
||+++|+|.+++.......+++..+..++.||+.||+|||+++ |+||||||+|||+++++.+||+|||+++....
T Consensus 258 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~--ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 335 (452)
T 1fmk_A 258 EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNEY 335 (452)
T ss_dssp CCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEECGGGCEEECCCCTTC-------
T ss_pred hhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeCCCCChhhEEECCCCCEEECCCccceecCCCce
Confidence 9999999999997544566999999999999999999999998 99999999999999999999999999864321
Q ss_pred -------CCccccchhhcccCCCCCCccHHHHHHHHHHHHh-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004979 587 -------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 658 (721)
Q Consensus 587 -------~~~~~~apE~~~~~~~s~ksDVwSfGvvL~Ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 658 (721)
++..|+|||.+....++.++|||||||++|||+| |+.||... ...+....+..+.. . ..+
T Consensus 336 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~--~~~~~~~~i~~~~~-~---------~~~ 403 (452)
T 1fmk_A 336 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM--VNREVLDQVERGYR-M---------PCP 403 (452)
T ss_dssp -------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTC--CHHHHHHHHHTTCC-C---------CCC
T ss_pred ecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCC--CHHHHHHHHHcCCC-C---------CCC
Confidence 2246999999998999999999999999999999 99999633 33333333333211 1 122
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCCC
Q 004979 659 ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPD 699 (721)
Q Consensus 659 ~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~ 699 (721)
..++.++.++|.+||+.||++|||+.+|++.|+++......
T Consensus 404 ~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~~~ 444 (452)
T 1fmk_A 404 PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEP 444 (452)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSCC
T ss_pred CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccCCc
Confidence 34567889999999999999999999999999998765443
No 53
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=1.3e-39 Score=355.01 Aligned_cols=254 Identities=19% Similarity=0.311 Sum_probs=204.0
Q ss_pred hhhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEEE
Q 004979 429 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 507 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~l 507 (721)
+++++.+|+|+||.||+|+.. +++.+|+|++....... ....+.+.+|+++|++++|||||++++++.+.+ ..++
T Consensus 17 y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~--~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~--~~~l 92 (384)
T 4fr4_A 17 FEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVE--RNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEE--DMFM 92 (384)
T ss_dssp EEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHH--TTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEE
T ss_pred eEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhccc--HHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC--EEEE
Confidence 377889999999999999965 57889999886432211 223467889999999999999999999999877 6799
Q ss_pred EEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCC---
Q 004979 508 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT--- 584 (721)
Q Consensus 508 V~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~--- 584 (721)
||||+++|+|.+++.. ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 93 v~e~~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~LH~~g--ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 168 (384)
T 4fr4_A 93 VVDLLLGGDLRYHLQQ--NVHFKEETVKLFICELVMALDYLQNQR--IIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE 168 (384)
T ss_dssp EECCCTTEEHHHHHHT--TCCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EEecCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCcHHHeEECCCCCEEEeccceeeeccCC
Confidence 9999999999999863 456999999999999999999999998 999999999999999999999999998632
Q ss_pred -----CCCCccccchhhccc---CCCCCCccHHHHHHHHHHHHhCCCcccCCCC-CHHHHHHHHhhcCCCCccccCCccc
Q 004979 585 -----TAAKTGSAAMELLET---SAVDLESNVYSFGTILFEMITGRISYSIENG-SLENWASEYLKGEQPLKDIVDPTLK 655 (721)
Q Consensus 585 -----~~~~~~~~apE~~~~---~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~l~ 655 (721)
..++..|+|||.+.. ..++.++|||||||++|||+||+.||..... ...+...........
T Consensus 169 ~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~---------- 238 (384)
T 4fr4_A 169 TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVT---------- 238 (384)
T ss_dssp CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHHCCCC----------
T ss_pred CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhhcccC----------
Confidence 235667999999863 4589999999999999999999999975433 333333333322211
Q ss_pred cccHHHHHHHHHHHHHcccCCCCCCCC-HHHHHHHHHHhhhcCCCCCCCCCChhHHHHHH
Q 004979 656 SFQENVLEELLVVIKNCVHPDPKQRPS-MRGIAAKLKEITAMEPDGATPKLSPLWWAELE 714 (721)
Q Consensus 656 ~~~~~~~~~l~~li~~Cl~~dP~~RPs-~~evl~~L~~i~~~~~~~~~p~~~~~~~~~l~ 714 (721)
++...+.++.+|+.+||+.||++||+ +.+|.+ +|++..++|+.+.
T Consensus 239 -~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~-------------hp~f~~~~w~~~~ 284 (384)
T 4fr4_A 239 -YPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN-------------FPYMNDINWDAVF 284 (384)
T ss_dssp -CCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT-------------SGGGTTCCHHHHH
T ss_pred -CCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc-------------ChhhhcCCHHHHH
Confidence 22344578899999999999999998 666543 5666667776664
No 54
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=1.1e-39 Score=343.04 Aligned_cols=262 Identities=11% Similarity=0.169 Sum_probs=208.7
Q ss_pred hhhhCcCCCCceeEEEEEEe-cCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcC-CCCccceEeEEEecCCCceEE
Q 004979 429 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPFTRM 506 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~-~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l-~H~nIv~l~g~~~~~~~~~~~ 506 (721)
+++.+.+|+|+||+||+|+. .+++.||||++..... .+.+.+|++++.++ +|+||+++++++.+.. ..+
T Consensus 12 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-------~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~--~~~ 82 (298)
T 1csn_A 12 YKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD-------APQLRDEYRTYKLLAGCTGIPNVYYFGQEGL--HNV 82 (298)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT-------SCCHHHHHHHHHHTTTCTTCCCEEEEEEETT--EEE
T ss_pred eEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCc-------cHHHHHHHHHHHHHhcCCCCCeEEeecCCCc--eeE
Confidence 46778899999999999995 5788999998754322 13578899999999 8999999999998776 679
Q ss_pred EEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCc-----EEEeccCCC
Q 004979 507 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYA-----AKISDFSFW 581 (721)
Q Consensus 507 lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~-----~kL~DFGla 581 (721)
+||||+ +|+|.+++... ...+++..+..|+.||+.||+|||+++ |+||||||+|||++.++. +||+|||++
T Consensus 83 lv~e~~-~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~--ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~ 158 (298)
T 1csn_A 83 LVIDLL-GPSLEDLLDLC-GRKFSVKTVAMAAKQMLARVQSIHEKS--LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMV 158 (298)
T ss_dssp EEEECC-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHTTT--EECCCCCGGGEEECCSSSTTTTCEEECCCTTC
T ss_pred EEEEec-CCCHHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHhCC--EecCCCCHHHEEeccCCCCCCCeEEEEECccc
Confidence 999999 99999999643 346999999999999999999999988 999999999999987776 999999987
Q ss_pred CCCC----------------CCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCCC-CHHHHHHHHhhcCC
Q 004979 582 NNTT----------------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENG-SLENWASEYLKGEQ 644 (721)
Q Consensus 582 ~~~~----------------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~-~~~~~~~~~~~~~~ 644 (721)
+... .++..|+|||.+.+..++.++|||||||++|||+||+.||..... ...+..........
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 238 (298)
T 1csn_A 159 KFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQ 238 (298)
T ss_dssp EESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHH
T ss_pred cccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhcc
Confidence 5321 245679999999999999999999999999999999999975432 22222222221100
Q ss_pred CCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCChhHHHH
Q 004979 645 PLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPDGATPKLSPLWWAE 712 (721)
Q Consensus 645 ~~~~~~d~~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~p~~~~~~~~~ 712 (721)
. .........++.++.+++.+||+.||++||++.+|++.|+++.+.... ....+++|+.
T Consensus 239 ~------~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~~---~~~~~~dw~~ 297 (298)
T 1csn_A 239 S------TPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLNT---TEDENFDWNL 297 (298)
T ss_dssp H------SCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTC---CSCSCCGGGC
T ss_pred C------ccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcCC---CCCCccccCC
Confidence 0 001111224467899999999999999999999999999998876543 3456788864
No 55
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=3.2e-39 Score=347.58 Aligned_cols=235 Identities=18% Similarity=0.277 Sum_probs=192.4
Q ss_pred hhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcC-CCCccceEeEEEecCCCceEEE
Q 004979 430 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPFTRMM 507 (721)
Q Consensus 430 ~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l-~H~nIv~l~g~~~~~~~~~~~l 507 (721)
++++.+|+|+||.||+|+.. +++.+|+|++....... ....+.+.+|+.++.++ +|||||++++++.+.+ ..++
T Consensus 12 ~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~--~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~--~~~l 87 (345)
T 3a8x_A 12 DLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVND--DEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTES--RLFF 87 (345)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCS--HHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS--EEEE
T ss_pred EEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcc--hHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCC--EEEE
Confidence 67788999999999999975 57889999987543222 33456788999999988 8999999999998876 7799
Q ss_pred EEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCC---
Q 004979 508 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT--- 584 (721)
Q Consensus 508 V~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~--- 584 (721)
||||+++|+|.+++... ..+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++..
T Consensus 88 v~e~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~~--ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~ 163 (345)
T 3a8x_A 88 VIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLALNYLHERG--IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 163 (345)
T ss_dssp EECCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCCGGGEEECTTSCEEECCGGGCBCSCCT
T ss_pred EEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC--ceecCCCHHHEEECCCCCEEEEeccccccccCC
Confidence 99999999999998643 46899999999999999999999998 999999999999999999999999998642
Q ss_pred ------CCCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCCC-------CHHHHHHHHhhcCCCCccccC
Q 004979 585 ------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENG-------SLENWASEYLKGEQPLKDIVD 651 (721)
Q Consensus 585 ------~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~-------~~~~~~~~~~~~~~~~~~~~d 651 (721)
..++..|+|||.+.+..++.++|||||||++|||+||+.||...+. ........+......
T Consensus 164 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~------ 237 (345)
T 3a8x_A 164 GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR------ 237 (345)
T ss_dssp TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCCC------
T ss_pred CCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCCC------
Confidence 2345679999999999999999999999999999999999964211 111222222222111
Q ss_pred CccccccHHHHHHHHHHHHHcccCCCCCCCCH
Q 004979 652 PTLKSFQENVLEELLVVIKNCVHPDPKQRPSM 683 (721)
Q Consensus 652 ~~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~ 683 (721)
++...+.++.+++.+||+.||++||++
T Consensus 238 -----~p~~~s~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 238 -----IPRSLSVKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp -----CCTTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred -----CCCCCCHHHHHHHHHHhcCCHhHCCCC
Confidence 223445678999999999999999996
No 56
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=6.6e-39 Score=341.17 Aligned_cols=261 Identities=18% Similarity=0.249 Sum_probs=206.5
Q ss_pred hhhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEEE
Q 004979 429 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 507 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~l 507 (721)
+.+.+.+|+|+||+||+|+.. +++.||||++...... ...+.+.+|++++++++||||+++++++...+....++
T Consensus 11 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 86 (319)
T 4euu_A 11 WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFL----RPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVL 86 (319)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGG----SCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEE
T ss_pred EEEEEEecCCCCeEEEEEEECCCCcEEEEEEecccccc----chHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEE
Confidence 467788999999999999965 5889999988643321 12456889999999999999999999998765446799
Q ss_pred EEecCCCCChhhhhhhcc-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEe----CCCCcEEEeccCCCC
Q 004979 508 VFEYSPNGSLFEHLHIQE-AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYL----TEDYAAKISDFSFWN 582 (721)
Q Consensus 508 V~Ey~~~GsL~~~l~~~~-~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl----~~~~~~kL~DFGla~ 582 (721)
||||+++|+|.+++.... ...+++..+..|+.||+.||+|||+.+ |+||||||+|||+ +.++.+||+|||+++
T Consensus 87 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~--ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~ 164 (319)
T 4euu_A 87 IMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG--IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164 (319)
T ss_dssp EEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEEEECTTSCEEEEECCCTTCE
T ss_pred EEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCC--EecCCCCHHHEEEeccCCCCceEEEccCCCce
Confidence 999999999999997543 234999999999999999999999998 9999999999999 888899999999985
Q ss_pred CCC--------CCCccccchhhcc--------cCCCCCCccHHHHHHHHHHHHhCCCcccCCC--CCHHHHHHHHhhcCC
Q 004979 583 NTT--------AAKTGSAAMELLE--------TSAVDLESNVYSFGTILFEMITGRISYSIEN--GSLENWASEYLKGEQ 644 (721)
Q Consensus 583 ~~~--------~~~~~~~apE~~~--------~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~--~~~~~~~~~~~~~~~ 644 (721)
... .++..|+|||.+. ...++.++|||||||++|||+||+.||.... ....+....+..+..
T Consensus 165 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p 244 (319)
T 4euu_A 165 ELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKP 244 (319)
T ss_dssp ECCTTCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCC
T ss_pred ecCCCCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCC
Confidence 422 2456799999875 5788999999999999999999999996332 223344444443322
Q ss_pred CC--cccc---C---------CccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhh
Q 004979 645 PL--KDIV---D---------PTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITA 695 (721)
Q Consensus 645 ~~--~~~~---d---------~~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~i~~ 695 (721)
.- ..+. . +............+.+++.+||+.||++|||++|+++...+...
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~~ 309 (319)
T 4euu_A 245 SGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILH 309 (319)
T ss_dssp TTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHTC
T ss_pred cccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHhh
Confidence 10 0000 0 11113446778899999999999999999999999998876543
No 57
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=3.1e-39 Score=348.34 Aligned_cols=238 Identities=18% Similarity=0.269 Sum_probs=198.8
Q ss_pred hhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEEEE
Q 004979 430 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 508 (721)
Q Consensus 430 ~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~lV 508 (721)
++++.+|+|+||.||+|+.. ++..||+|++....... ....+.+.+|++++++++||||+++++++.+.+ ..++|
T Consensus 44 ~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~--~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv 119 (350)
T 1rdq_E 44 DRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK--LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMV 119 (350)
T ss_dssp EEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHH--TTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEEE
T ss_pred EEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhcc--HHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCC--EEEEE
Confidence 67888999999999999965 68899999986432211 122457889999999999999999999998876 67999
Q ss_pred EecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCCC---
Q 004979 509 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT--- 585 (721)
Q Consensus 509 ~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~~--- 585 (721)
|||+++|+|.+++... ..+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++...
T Consensus 120 ~e~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~--ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~~ 195 (350)
T 1rdq_E 120 MEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195 (350)
T ss_dssp EECCTTCBHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTSCEEECCCTTCEECSSCB
T ss_pred EcCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC--cccccCccceEEECCCCCEEEcccccceeccCCc
Confidence 9999999999998643 46899999999999999999999998 9999999999999999999999999986432
Q ss_pred ---CCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHHH
Q 004979 586 ---AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVL 662 (721)
Q Consensus 586 ---~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 662 (721)
.++..|+|||.+.+..++.++|||||||++|||+||+.||... +..+....+..+... ++...+
T Consensus 196 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~--~~~~~~~~i~~~~~~-----------~p~~~~ 262 (350)
T 1rdq_E 196 WTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD--QPIQIYEKIVSGKVR-----------FPSHFS 262 (350)
T ss_dssp CCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHCCCC-----------CCTTCC
T ss_pred ccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCC--CHHHHHHHHHcCCCC-----------CCCCCC
Confidence 3456799999999999999999999999999999999999643 344555555544322 123345
Q ss_pred HHHHHHHHHcccCCCCCCCC-----HHHHHH
Q 004979 663 EELLVVIKNCVHPDPKQRPS-----MRGIAA 688 (721)
Q Consensus 663 ~~l~~li~~Cl~~dP~~RPs-----~~evl~ 688 (721)
.++.+++.+||+.||++||+ ++||++
T Consensus 263 ~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 263 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp HHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred HHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence 67899999999999999998 777764
No 58
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=1.7e-39 Score=353.06 Aligned_cols=254 Identities=20% Similarity=0.269 Sum_probs=195.4
Q ss_pred hhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccchhhHHHHHHHHHHHH-HhcCCCCccceEeEEEecCCCceEEE
Q 004979 430 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDT-LSKVNHKNFVNLIGYCEEDEPFTRMM 507 (721)
Q Consensus 430 ~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~-l~~l~H~nIv~l~g~~~~~~~~~~~l 507 (721)
++++.||+|+||+||+|+.. ++..+|+|++....... ......+.+|..+ ++.++|||||++++++.+.+ ..|+
T Consensus 41 ~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~--~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~--~~~l 116 (373)
T 2r5t_A 41 HFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILK--KKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTAD--KLYF 116 (373)
T ss_dssp EEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC---------------CCBCCCCCTTBCCEEEEEECSS--EEEE
T ss_pred EEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhh--hHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCC--EEEE
Confidence 67889999999999999975 57889999987543322 2233556777776 57789999999999999877 7899
Q ss_pred EEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCC---
Q 004979 508 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT--- 584 (721)
Q Consensus 508 V~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~--- 584 (721)
||||+++|+|.+++.. ...+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++..
T Consensus 117 v~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~g--ivHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~ 192 (373)
T 2r5t_A 117 VLDYINGGELFYHLQR--ERCFLEPRARFYAAEIASALGYLHSLN--IVYRDLKPENILLDSQGHIVLTDFGLCKENIEH 192 (373)
T ss_dssp EEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTSCEEECCCCBCGGGBCC
T ss_pred EEeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC--ceecCCCHHHEEECCCCCEEEeeCccccccccC
Confidence 9999999999999864 346889999999999999999999998 999999999999999999999999998631
Q ss_pred ------CCCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004979 585 ------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 658 (721)
Q Consensus 585 ------~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 658 (721)
..++..|+|||.+.+..++.++|||||||++|||++|+.||... +..+....+......+ +
T Consensus 193 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~--~~~~~~~~i~~~~~~~-----------~ 259 (373)
T 2r5t_A 193 NSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSR--NTAEMYDNILNKPLQL-----------K 259 (373)
T ss_dssp CCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCS--BHHHHHHHHHHSCCCC-----------C
T ss_pred CCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCC--CHHHHHHHHHhcccCC-----------C
Confidence 23466799999999999999999999999999999999999643 3445555554432211 1
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCChhHHHHH
Q 004979 659 ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPDGATPKLSPLWWAEL 713 (721)
Q Consensus 659 ~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~p~~~~~~~~~l 713 (721)
...+.++.+|+.+||+.||++||++.+.+..+.+ +|++..++|+.+
T Consensus 260 ~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~i~~---------h~~f~~~~w~~l 305 (373)
T 2r5t_A 260 PNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKS---------HVFFSLINWDDL 305 (373)
T ss_dssp SSSCHHHHHHHHHHTCSSGGGSTTTTTTHHHHHT---------SGGGTTCCHHHH
T ss_pred CCCCHHHHHHHHHHcccCHHhCCCCCCCHHHHhC---------CccccCCCHHHH
Confidence 2345678899999999999999998654444332 445555555554
No 59
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=3.9e-39 Score=339.27 Aligned_cols=248 Identities=22% Similarity=0.342 Sum_probs=191.7
Q ss_pred hhhhCcCCCCceeEEEEEEecCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhc--CCCCccceEeEEEecC--CCce
Q 004979 429 SNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSK--VNHKNFVNLIGYCEED--EPFT 504 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~--l~H~nIv~l~g~~~~~--~~~~ 504 (721)
+++++.+|+|+||+||+|+. ++..||||++.... ...+.+|.+++.. ++||||+++++++... ....
T Consensus 10 y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~--------~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~ 80 (301)
T 3q4u_A 10 ITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSRD--------EKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQ 80 (301)
T ss_dssp CEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGGG--------HHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEE
T ss_pred EEEEEeeccCCCcEEEEEEE-CCEEEEEEEecccc--------chhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCce
Confidence 46788999999999999988 58899999875321 2345566666665 8999999999987643 2225
Q ss_pred EEEEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHh--------cCCCCeEeeCCCCCCeEeCCCCcEEEe
Q 004979 505 RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMH--------QLTPPIAHRNLQSSSIYLTEDYAAKIS 576 (721)
Q Consensus 505 ~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH--------~~~~~IvHrDLKp~NILl~~~~~~kL~ 576 (721)
.++||||+++|+|.++++ ...+++..+..|+.|++.||+||| +.+ |+||||||+|||++.++.+||+
T Consensus 81 ~~lv~e~~~~g~L~~~l~---~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~--ivH~Dlkp~Nill~~~~~~kl~ 155 (301)
T 3q4u_A 81 LWLITHYHEMGSLYDYLQ---LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPA--IAHRDLKSKNILVKKNGQCCIA 155 (301)
T ss_dssp EEEEECCCTTCBHHHHHT---TCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCE--EECSCCCGGGEEECTTSCEEEC
T ss_pred eEEehhhccCCCHHHHHh---hcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCC--eecCCCChHhEEEcCCCCEEEe
Confidence 799999999999999995 346999999999999999999999 766 9999999999999999999999
Q ss_pred ccCCCCCC-------------CCCCccccchhhcccC------CCCCCccHHHHHHHHHHHHhC----------CCcccC
Q 004979 577 DFSFWNNT-------------TAAKTGSAAMELLETS------AVDLESNVYSFGTILFEMITG----------RISYSI 627 (721)
Q Consensus 577 DFGla~~~-------------~~~~~~~~apE~~~~~------~~s~ksDVwSfGvvL~ElltG----------~~P~~~ 627 (721)
|||+++.. ..++..|+|||.+... .++.++|||||||++|||+|| +.||..
T Consensus 156 Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~ 235 (301)
T 3q4u_A 156 DLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYD 235 (301)
T ss_dssp CCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTT
T ss_pred eCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccc
Confidence 99987421 1456689999998766 455799999999999999999 888853
Q ss_pred CC--CCHHHHHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHh
Q 004979 628 EN--GSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 693 (721)
Q Consensus 628 ~~--~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~i 693 (721)
.. .................... .........+.++.+++.+||+.||++|||+.||++.|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 236 VVPNDPSFEDMRKVVCVDQQRPNI---PNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp TSCSSCCHHHHHHHHTTSCCCCCC---CGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred cCCCCcchhhhhHHHhccCCCCCC---ChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 21 11122222222111111110 00112345778999999999999999999999999999886
No 60
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=7.1e-40 Score=369.85 Aligned_cols=244 Identities=22% Similarity=0.370 Sum_probs=202.4
Q ss_pred hhhCcCCCCceeEEEEEEecC-CcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEEEE
Q 004979 430 NIIGSFSDGTVGTVYKGTLSS-GVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 508 (721)
Q Consensus 430 ~ii~~lg~G~~g~Vyk~~~~~-~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~lV 508 (721)
++.+.||+|+||.||+|++.. +..||||++..... ..+.|.+|+++|++++|||||+++++|...+ ..++|
T Consensus 223 ~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~------~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~--~~~lv 294 (495)
T 1opk_A 223 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM------EVEEFLKEAAVMKEIKHPNLVQLLGVCTREP--PFYII 294 (495)
T ss_dssp EEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSS------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--SCEEE
T ss_pred eeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCccc------chHHHHHHHHHHHhcCCCCEeeEEEEEecCC--cEEEE
Confidence 567789999999999999764 78899998864321 1367999999999999999999999998876 56999
Q ss_pred EecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCCCC--
Q 004979 509 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA-- 586 (721)
Q Consensus 509 ~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~~~-- 586 (721)
|||+++|+|.++++......+++..++.|+.||+.||+|||+++ |+||||||+|||+++++.+||+|||+++....
T Consensus 295 ~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~--ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 372 (495)
T 1opk_A 295 TEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN--FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT 372 (495)
T ss_dssp EECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECGGGCEEECCTTCEECCTTCC
T ss_pred EEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCChhhEEECCCCcEEEeecccceeccCCc
Confidence 99999999999997655667999999999999999999999998 99999999999999999999999999864321
Q ss_pred --------CCccccchhhcccCCCCCCccHHHHHHHHHHHHh-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccc
Q 004979 587 --------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSF 657 (721)
Q Consensus 587 --------~~~~~~apE~~~~~~~s~ksDVwSfGvvL~Ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 657 (721)
.+..|+|||.+....++.++|||||||++|||+| |+.||.... ..+....+..+ ... ..
T Consensus 373 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~--~~~~~~~~~~~-~~~---------~~ 440 (495)
T 1opk_A 373 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID--LSQVYELLEKD-YRM---------ER 440 (495)
T ss_dssp EECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC--GGGHHHHHHTT-CCC---------CC
T ss_pred eeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCC--HHHHHHHHHcC-CCC---------CC
Confidence 1236899999998899999999999999999999 999996433 22222222221 111 12
Q ss_pred cHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhh
Q 004979 658 QENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITA 695 (721)
Q Consensus 658 ~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~i~~ 695 (721)
+..++.++.+||.+||+.||++||++.||++.|+.+..
T Consensus 441 ~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~ 478 (495)
T 1opk_A 441 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 478 (495)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCS
T ss_pred CCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHh
Confidence 23456789999999999999999999999999988653
No 61
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=1.9e-39 Score=348.47 Aligned_cols=249 Identities=23% Similarity=0.353 Sum_probs=202.9
Q ss_pred hhhCcCCCCceeEEEEEEec------CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCc
Q 004979 430 NIIGSFSDGTVGTVYKGTLS------SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPF 503 (721)
Q Consensus 430 ~ii~~lg~G~~g~Vyk~~~~------~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~ 503 (721)
++++.+|+|+||.||+|+.. ++..||||++.... .....+.|.+|++++++++||||+++++++.+.+
T Consensus 50 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-- 123 (343)
T 1luf_A 50 EYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA----SADMQADFQREAALMAEFDNPNIVKLLGVCAVGK-- 123 (343)
T ss_dssp EEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC----CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS--
T ss_pred eeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEecccc----CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCC--
Confidence 67788999999999999974 34789999886432 2334568999999999999999999999998876
Q ss_pred eEEEEEecCCCCChhhhhhhcc----------------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCC
Q 004979 504 TRMMVFEYSPNGSLFEHLHIQE----------------------AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQ 561 (721)
Q Consensus 504 ~~~lV~Ey~~~GsL~~~l~~~~----------------------~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLK 561 (721)
..++||||+++|+|.+++.... ...+++..++.|+.||+.||+|||+++ |+|||||
T Consensus 124 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~--ivH~Dlk 201 (343)
T 1luf_A 124 PMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK--FVHRDLA 201 (343)
T ss_dssp SCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCS
T ss_pred ceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCC
Confidence 5699999999999999997532 156899999999999999999999998 9999999
Q ss_pred CCCeEeCCCCcEEEeccCCCCCC-----------CCCCccccchhhcccCCCCCCccHHHHHHHHHHHHh-CCCcccCCC
Q 004979 562 SSSIYLTEDYAAKISDFSFWNNT-----------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIEN 629 (721)
Q Consensus 562 p~NILl~~~~~~kL~DFGla~~~-----------~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~Ellt-G~~P~~~~~ 629 (721)
|+|||+++++.+||+|||+++.. ..++..|+|||.+.+..++.++|||||||++|||+| |+.||...
T Consensus 202 p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~- 280 (343)
T 1luf_A 202 TRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGM- 280 (343)
T ss_dssp GGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS-
T ss_pred cceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCC-
Confidence 99999999999999999987421 123446999999998899999999999999999999 99999633
Q ss_pred CCHHHHHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCC
Q 004979 630 GSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEP 698 (721)
Q Consensus 630 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 698 (721)
...+....+..+.. ...+..++.++.+++.+||+.||++||++.|+++.|+++.+...
T Consensus 281 -~~~~~~~~~~~~~~----------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~~ 338 (343)
T 1luf_A 281 -AHEEVIYYVRDGNI----------LACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERAE 338 (343)
T ss_dssp -CHHHHHHHHHTTCC----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC---
T ss_pred -ChHHHHHHHhCCCc----------CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhhh
Confidence 33343333333211 11223455689999999999999999999999999999876543
No 62
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=1.1e-39 Score=351.05 Aligned_cols=237 Identities=19% Similarity=0.246 Sum_probs=195.1
Q ss_pred hhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcC-CCCccceEeEEEecCCCceEEE
Q 004979 430 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPFTRMM 507 (721)
Q Consensus 430 ~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l-~H~nIv~l~g~~~~~~~~~~~l 507 (721)
++++.+|+|+||+||+|+.. +++.||+|++....... ......+..|.+++.++ +||||+++++++.+.+ ..++
T Consensus 20 ~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~--~~~l 95 (345)
T 1xjd_A 20 ILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLM--DDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKE--NLFF 95 (345)
T ss_dssp EEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHH--TTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSS--EEEE
T ss_pred EEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhh--hhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCC--EEEE
Confidence 67788999999999999975 67889999886532111 12235678899999877 9999999999998877 6799
Q ss_pred EEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCC---
Q 004979 508 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT--- 584 (721)
Q Consensus 508 V~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~--- 584 (721)
||||+++|+|.+++.. ...+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++..
T Consensus 96 v~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~--ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 171 (345)
T 1xjd_A 96 VMEYLNGGDLMYHIQS--CHKFDLSRATFYAAEIILGLQFLHSKG--IVYRDLKLDNILLDKDGHIKIADFGMCKENMLG 171 (345)
T ss_dssp EEECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred EEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC--eEeCCCChhhEEECCCCCEEEeEChhhhhcccC
Confidence 9999999999999864 346899999999999999999999998 999999999999999999999999998642
Q ss_pred ------CCCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004979 585 ------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 658 (721)
Q Consensus 585 ------~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 658 (721)
..++..|+|||.+.+..++.++|||||||++|||+||+.||... +..+....+..+...+ +
T Consensus 172 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~--~~~~~~~~i~~~~~~~-----------p 238 (345)
T 1xjd_A 172 DAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQ--DEEELFHSIRMDNPFY-----------P 238 (345)
T ss_dssp TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHCCCCC-----------C
T ss_pred CCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCC--CHHHHHHHHHhCCCCC-----------C
Confidence 22456799999999999999999999999999999999999643 3444444444432221 2
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHH-HHH
Q 004979 659 ENVLEELLVVIKNCVHPDPKQRPSMR-GIA 687 (721)
Q Consensus 659 ~~~~~~l~~li~~Cl~~dP~~RPs~~-evl 687 (721)
...+.++.+++.+||+.||++||++. ||.
T Consensus 239 ~~~s~~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 239 RWLEKEAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp TTSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred cccCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence 23456789999999999999999987 554
No 63
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.6e-39 Score=353.02 Aligned_cols=248 Identities=23% Similarity=0.330 Sum_probs=201.1
Q ss_pred hhhhCcCCCCceeEEEEEEec------CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCC
Q 004979 429 SNIIGSFSDGTVGTVYKGTLS------SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEP 502 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~~------~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~ 502 (721)
+++++.+|+|+||+||+|++. ++..||||++.... .......+.+|+.++++++|||||++++++.+.+
T Consensus 73 ~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~- 147 (367)
T 3l9p_A 73 ITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC----SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSL- 147 (367)
T ss_dssp EEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSC----CHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-
T ss_pred eEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEeccccc----ChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCC-
Confidence 367889999999999999853 45689999885322 2334467999999999999999999999998876
Q ss_pred ceEEEEEecCCCCChhhhhhhcc-----CCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCC---cEE
Q 004979 503 FTRMMVFEYSPNGSLFEHLHIQE-----AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDY---AAK 574 (721)
Q Consensus 503 ~~~~lV~Ey~~~GsL~~~l~~~~-----~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~---~~k 574 (721)
..++||||+++|+|.+++.... ...+++..++.|+.||+.||+|||+++ |+||||||+|||++.++ .+|
T Consensus 148 -~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlkp~NIll~~~~~~~~~k 224 (367)
T 3l9p_A 148 -PRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAK 224 (367)
T ss_dssp -SCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEESCSSTTCCEE
T ss_pred -CCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCC--eeCCCCChhhEEEecCCCCceEE
Confidence 5599999999999999997543 245899999999999999999999998 99999999999999554 599
Q ss_pred EeccCCCCCC-----------CCCCccccchhhcccCCCCCCccHHHHHHHHHHHHh-CCCcccCCCCCHHHHHHHHhhc
Q 004979 575 ISDFSFWNNT-----------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKG 642 (721)
Q Consensus 575 L~DFGla~~~-----------~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~Ellt-G~~P~~~~~~~~~~~~~~~~~~ 642 (721)
|+|||+++.. ..++..|+|||.+.+..++.++|||||||++|||+| |+.||... ...+....+..+
T Consensus 225 L~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~--~~~~~~~~i~~~ 302 (367)
T 3l9p_A 225 IGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK--SNQEVLEFVTSG 302 (367)
T ss_dssp ECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC--CHHHHHHHHHTT
T ss_pred ECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC--CHHHHHHHHHcC
Confidence 9999987521 123457999999999999999999999999999998 99999633 333444333332
Q ss_pred CCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhc
Q 004979 643 EQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAM 696 (721)
Q Consensus 643 ~~~~~~~~d~~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~i~~~ 696 (721)
... ..+..++.++.+|+.+||+.||++||++.||++.|+.+.+.
T Consensus 303 ~~~----------~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~ 346 (367)
T 3l9p_A 303 GRM----------DPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 346 (367)
T ss_dssp CCC----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred CCC----------CCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhC
Confidence 211 11233456789999999999999999999999999988764
No 64
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=5.4e-39 Score=343.31 Aligned_cols=240 Identities=19% Similarity=0.267 Sum_probs=190.6
Q ss_pred hhhhCcCCCCceeEEEEEEe----cCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCce
Q 004979 429 SNIIGSFSDGTVGTVYKGTL----SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFT 504 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~----~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~ 504 (721)
+++++.+|+|+||+||+|+. .+++.+|+|++....... .......+.+|++++++++||||+++++++...+ .
T Consensus 19 y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~ 95 (327)
T 3a62_A 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVR-NAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGG--K 95 (327)
T ss_dssp EEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC---------------HHHHHHHCCCTTBCCEEEEEECSS--C
T ss_pred eEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhh-hhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCC--E
Confidence 37788999999999999986 478899999986543211 1223456889999999999999999999998876 6
Q ss_pred EEEEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCC
Q 004979 505 RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT 584 (721)
Q Consensus 505 ~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~ 584 (721)
.++||||+++|+|.+++.. ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 96 ~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~al~~lH~~~--ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~ 171 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLER--EGIFMEDTACFYLAEISMALGHLHQKG--IIYRDLKPENIMLNHQGHVKLTDFGLCKES 171 (327)
T ss_dssp EEEEEECCTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCTTTEEECTTSCEEECCCSCC---
T ss_pred EEEEEeCCCCCcHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHhCC--EEcccCCHHHeEECCCCcEEEEeCCccccc
Confidence 7999999999999999864 345889999999999999999999998 999999999999999999999999987532
Q ss_pred ---------CCCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccc
Q 004979 585 ---------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLK 655 (721)
Q Consensus 585 ---------~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 655 (721)
..++..|+|||.+....++.++|||||||++|||++|+.||... +..+....+......
T Consensus 172 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~--~~~~~~~~i~~~~~~---------- 239 (327)
T 3a62_A 172 IHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGE--NRKKTIDKILKCKLN---------- 239 (327)
T ss_dssp -------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCS--SHHHHHHHHHHTCCC----------
T ss_pred ccCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCC--CHHHHHHHHHhCCCC----------
Confidence 23566799999999999999999999999999999999999643 334444444443222
Q ss_pred cccHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 004979 656 SFQENVLEELLVVIKNCVHPDPKQRP-----SMRGIAA 688 (721)
Q Consensus 656 ~~~~~~~~~l~~li~~Cl~~dP~~RP-----s~~evl~ 688 (721)
++...+.++.+++.+||+.||++|| ++.|+++
T Consensus 240 -~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 240 -LPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp -CCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred -CCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence 1223456789999999999999999 7778765
No 65
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=9e-39 Score=341.44 Aligned_cols=247 Identities=18% Similarity=0.267 Sum_probs=199.9
Q ss_pred hhhhhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccch-hhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCce
Q 004979 427 DFSNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADW-SKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFT 504 (721)
Q Consensus 427 ~~~~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~-~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~ 504 (721)
+.+++.+.+|+|+||.||+|+.. ++..||+|++........ .....+.+.+|++++++++||||+++++++.+.+ .
T Consensus 11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~ 88 (326)
T 2y0a_A 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKT--D 88 (326)
T ss_dssp HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--E
T ss_pred cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC--E
Confidence 44578889999999999999965 688999998875432211 1112467999999999999999999999998876 6
Q ss_pred EEEEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCC----cEEEeccCC
Q 004979 505 RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDY----AAKISDFSF 580 (721)
Q Consensus 505 ~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~----~~kL~DFGl 580 (721)
.++||||+++|+|.+++.. ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++ .+||+|||+
T Consensus 89 ~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~al~~lH~~~--ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~ 164 (326)
T 2y0a_A 89 VILILELVAGGELFDFLAE--KESLTEEEATEFLKQILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164 (326)
T ss_dssp EEEEEECCCSCBHHHHHTT--SSCCBHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEESCSSSSSCCEEECCCTT
T ss_pred EEEEEEcCCCCCHHHHHHh--cCCcCHHHHHHHHHHHHHHHHHHHHCC--eEcCCCCHHHEEEecCCCCCCCEEEEECCC
Confidence 7999999999999999853 456999999999999999999999998 99999999999999887 899999999
Q ss_pred CCCCC--------CCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCccccCC
Q 004979 581 WNNTT--------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDP 652 (721)
Q Consensus 581 a~~~~--------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 652 (721)
++... .++..|+|||.+....++.++|||||||++|||+||+.||... ...+....+........
T Consensus 165 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~--~~~~~~~~~~~~~~~~~----- 237 (326)
T 2y0a_A 165 AHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD--TKQETLANVSAVNYEFE----- 237 (326)
T ss_dssp CEECCTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCS--SHHHHHHHHHHTCCCCC-----
T ss_pred CeECCCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCC--CHHHHHHHHHhcCCCcC-----
Confidence 85432 2456799999999999999999999999999999999999643 23333333332221111
Q ss_pred ccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004979 653 TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 688 (721)
Q Consensus 653 ~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 688 (721)
.......+.++.+++.+||+.||++|||+.|+++
T Consensus 238 --~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 238 --DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp --HHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred --ccccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 0111234567889999999999999999999986
No 66
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=4.7e-39 Score=341.28 Aligned_cols=251 Identities=22% Similarity=0.279 Sum_probs=194.1
Q ss_pred hhhhCcCCCCceeEEEEEEecCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEEEE
Q 004979 429 SNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 508 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~lV 508 (721)
|++++.+|+|+||+||+|+..+++.||+|++..... .....+.+.+|++++++++|||||++++++.+.+ ..++|
T Consensus 23 y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv 97 (311)
T 3niz_A 23 YQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAE---DEGIPSTAIREISLLKELHHPNIVSLIDVIHSER--CLTLV 97 (311)
T ss_dssp EEEEEEEEECSSCEEEEEEETTSCEEEEEEEC---------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSS--CEEEE
T ss_pred hHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccc---cchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCC--EEEEE
Confidence 477889999999999999998899999999865422 1223467899999999999999999999998776 67999
Q ss_pred EecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCCC---
Q 004979 509 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT--- 585 (721)
Q Consensus 509 ~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~~--- 585 (721)
|||++ |+|.+++.. ....+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 98 ~e~~~-~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~--ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~ 173 (311)
T 3niz_A 98 FEFME-KDLKKVLDE-NKTGLQDSQIKIYLYQLLRGVAHCHQHR--ILHRDLKPQNLLINSDGALKLADFGLARAFGIPV 173 (311)
T ss_dssp EECCS-EEHHHHHHT-CTTCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECTTCCEEECCCTTCEETTSCC
T ss_pred EcCCC-CCHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCchHhEEECCCCCEEEccCcCceecCCCc
Confidence 99997 588888753 3456999999999999999999999998 9999999999999999999999999985332
Q ss_pred ------CCCccccchhhccc-CCCCCCccHHHHHHHHHHHHhCCCcccCCCC-CHHHHHHHHhhcCCCC--ccc------
Q 004979 586 ------AAKTGSAAMELLET-SAVDLESNVYSFGTILFEMITGRISYSIENG-SLENWASEYLKGEQPL--KDI------ 649 (721)
Q Consensus 586 ------~~~~~~~apE~~~~-~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~-~~~~~~~~~~~~~~~~--~~~------ 649 (721)
.++..|+|||.+.+ ..++.++|||||||++|||+||+.||..... +....+........+. ...
T Consensus 174 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 253 (311)
T 3niz_A 174 RSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLW 253 (311)
T ss_dssp C---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHH
T ss_pred ccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchh
Confidence 24567999999865 5689999999999999999999999975432 2222222222111100 000
Q ss_pred -------cC-CccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004979 650 -------VD-PTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 688 (721)
Q Consensus 650 -------~d-~~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 688 (721)
.+ .......+....++.+|+.+||+.||++|||+.|+++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 254 KQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp HSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred hhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 00 0001112234568899999999999999999999986
No 67
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=1.5e-39 Score=347.51 Aligned_cols=245 Identities=20% Similarity=0.335 Sum_probs=192.1
Q ss_pred hhhhCcCCCCceeEEEEEEec-CCcE----EEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCc
Q 004979 429 SNIIGSFSDGTVGTVYKGTLS-SGVE----IAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPF 503 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~~-~~~~----vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~ 503 (721)
+++++.+|+|+||+||+|++. ++.. |++|.+.... .....+.|.+|++++++++|||||+++++|.+..
T Consensus 17 y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-- 90 (327)
T 3poz_A 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT----SPKANKEILDEAYVMASVDNPHVCRLLGICLTST-- 90 (327)
T ss_dssp EEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-----------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS--
T ss_pred cccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeeccccc----CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC--
Confidence 367788999999999999964 4444 4666554221 1223467999999999999999999999998754
Q ss_pred eEEEEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCC
Q 004979 504 TRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN 583 (721)
Q Consensus 504 ~~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~ 583 (721)
.++|+||+++|+|.+++... ...+++..+..|+.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 91 -~~~v~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~~--ivH~Dikp~NIll~~~~~~kl~Dfg~a~~ 166 (327)
T 3poz_A 91 -VQLITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKL 166 (327)
T ss_dssp -EEEEEECCTTCBHHHHHHHS-TTSCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEEEETTEEEECCTTHHHH
T ss_pred -eEEEEEecCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHhhCC--eeCCCCChheEEECCCCCEEEccCcceeE
Confidence 57999999999999998643 456999999999999999999999998 99999999999999999999999998742
Q ss_pred CC-----------CCCccccchhhcccCCCCCCccHHHHHHHHHHHHh-CCCcccCCCCCHHHHHHHHhhcCCCCccccC
Q 004979 584 TT-----------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVD 651 (721)
Q Consensus 584 ~~-----------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~Ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d 651 (721)
.. .++..|+|||.+.+..++.++|||||||++|||+| |+.||...... +.......+. ..
T Consensus 167 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~~~~~~~~~~-~~----- 238 (327)
T 3poz_A 167 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--EISSILEKGE-RL----- 238 (327)
T ss_dssp HTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--GHHHHHHTTC-CC-----
T ss_pred ccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHH--HHHHHHHcCC-CC-----
Confidence 21 12347999999999999999999999999999999 99999644322 2222221111 11
Q ss_pred CccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhh
Q 004979 652 PTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITA 695 (721)
Q Consensus 652 ~~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~i~~ 695 (721)
..+..++.++.+++.+||+.||++||++.|+++.|+.+..
T Consensus 239 ----~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~ 278 (327)
T 3poz_A 239 ----PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp ----CCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHT
T ss_pred ----CCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 1123345678899999999999999999999999998764
No 68
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=1.2e-39 Score=352.38 Aligned_cols=250 Identities=21% Similarity=0.330 Sum_probs=200.5
Q ss_pred hhhhCcCCCCceeEEEEEEe------cCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcC-CCCccceEeEEEecCC
Q 004979 429 SNIIGSFSDGTVGTVYKGTL------SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDE 501 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~------~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l-~H~nIv~l~g~~~~~~ 501 (721)
+++.+.+|+|+||.||+|++ .+++.||||++.... .....+.+.+|++++.++ +|||||++++++.+.+
T Consensus 24 y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 99 (359)
T 3vhe_A 24 LKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA----THSEHRALMSELKILIHIGHHLNVVNLLGACTKPG 99 (359)
T ss_dssp EEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTT
T ss_pred eeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcC----CHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCC
Confidence 37788999999999999974 245789999886432 123356799999999999 8999999999998755
Q ss_pred CceEEEEEecCCCCChhhhhhhccC-------------------------------------------------------
Q 004979 502 PFTRMMVFEYSPNGSLFEHLHIQEA------------------------------------------------------- 526 (721)
Q Consensus 502 ~~~~~lV~Ey~~~GsL~~~l~~~~~------------------------------------------------------- 526 (721)
. ..++||||+++|+|.++++....
T Consensus 100 ~-~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (359)
T 3vhe_A 100 G-PLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEE 178 (359)
T ss_dssp S-CCEEEEECCTTEEHHHHHHTTTTSBCSCC-------------------------------------------------
T ss_pred C-ceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhh
Confidence 3 36899999999999999974321
Q ss_pred ---------CCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCCCC-----------
Q 004979 527 ---------EHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA----------- 586 (721)
Q Consensus 527 ---------~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~~~----------- 586 (721)
..+++..+..|+.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 179 ~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~--ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~ 256 (359)
T 3vhe_A 179 EEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 256 (359)
T ss_dssp -----CTTTTCBCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CE
T ss_pred cccccchhccccCHHHHHHHHHHHHHHHHHHHHCC--cccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccC
Confidence 12889999999999999999999998 99999999999999999999999999864321
Q ss_pred CCccccchhhcccCCCCCCccHHHHHHHHHHHHh-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHHHHHH
Q 004979 587 AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEEL 665 (721)
Q Consensus 587 ~~~~~~apE~~~~~~~s~ksDVwSfGvvL~Ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l 665 (721)
++..|+|||.+.+..++.++|||||||++|||+| |+.||....... . +.......... ..+..++.++
T Consensus 257 ~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-~-~~~~~~~~~~~---------~~~~~~~~~l 325 (359)
T 3vhe_A 257 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-E-FCRRLKEGTRM---------RAPDYTTPEM 325 (359)
T ss_dssp ECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH-H-HHHHHHHTCCC---------CCCTTCCHHH
T ss_pred CCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhH-H-HHHHHHcCCCC---------CCCCCCCHHH
Confidence 2335999999999999999999999999999999 999997543322 1 22222211111 1122345678
Q ss_pred HHHHHHcccCCCCCCCCHHHHHHHHHHhhhc
Q 004979 666 LVVIKNCVHPDPKQRPSMRGIAAKLKEITAM 696 (721)
Q Consensus 666 ~~li~~Cl~~dP~~RPs~~evl~~L~~i~~~ 696 (721)
.+++.+||+.||++||++.||++.|+++.+.
T Consensus 326 ~~li~~~l~~dP~~Rps~~ell~~L~~~~~~ 356 (359)
T 3vhe_A 326 YQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 356 (359)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHccCChhhCCCHHHHHHHHHHHHHH
Confidence 9999999999999999999999999998764
No 69
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=3.8e-39 Score=347.82 Aligned_cols=238 Identities=17% Similarity=0.230 Sum_probs=196.6
Q ss_pred hhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcC-CCCccceEeEEEecCCCceEEE
Q 004979 430 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPFTRMM 507 (721)
Q Consensus 430 ~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l-~H~nIv~l~g~~~~~~~~~~~l 507 (721)
++++.+|+|+||+||+|+.. +++.||+|++....... ....+.+..|.+++..+ +||||+++++++.+.+ ..|+
T Consensus 23 ~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~--~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~--~~~l 98 (353)
T 2i0e_A 23 NFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQ--DDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMD--RLYF 98 (353)
T ss_dssp EEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHH--TTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSS--EEEE
T ss_pred EEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhc--chHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCC--EEEE
Confidence 77888999999999999976 47789999886542211 22345688999999988 8999999999998877 7799
Q ss_pred EEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCC---
Q 004979 508 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT--- 584 (721)
Q Consensus 508 V~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~--- 584 (721)
||||+++|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 99 v~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~g--ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 174 (353)
T 2i0e_A 99 VMEYVNGGDLMYHIQQV--GRFKEPHAVFYAAEIAIGLFFLQSKG--IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD 174 (353)
T ss_dssp EEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred EEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC--EEeccCCHHHEEEcCCCcEEEEeCCcccccccC
Confidence 99999999999998643 45899999999999999999999998 999999999999999999999999998642
Q ss_pred ------CCCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004979 585 ------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 658 (721)
Q Consensus 585 ------~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 658 (721)
..++..|+|||.+.+..++.++|||||||++|||++|+.||... +..+....+...... ++
T Consensus 175 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~--~~~~~~~~i~~~~~~-----------~p 241 (353)
T 2i0e_A 175 GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGE--DEDELFQSIMEHNVA-----------YP 241 (353)
T ss_dssp TCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHCCCC-----------CC
T ss_pred CcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCC--CHHHHHHHHHhCCCC-----------CC
Confidence 23456799999999999999999999999999999999999643 444555555544322 12
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCC-----HHHHHH
Q 004979 659 ENVLEELLVVIKNCVHPDPKQRPS-----MRGIAA 688 (721)
Q Consensus 659 ~~~~~~l~~li~~Cl~~dP~~RPs-----~~evl~ 688 (721)
...+.++.+++.+||+.||++||+ ++||++
T Consensus 242 ~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~ 276 (353)
T 2i0e_A 242 KSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 276 (353)
T ss_dssp TTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred CCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 344578899999999999999996 466653
No 70
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=5e-39 Score=347.05 Aligned_cols=248 Identities=17% Similarity=0.224 Sum_probs=198.4
Q ss_pred hhhhhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceE
Q 004979 427 DFSNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTR 505 (721)
Q Consensus 427 ~~~~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~ 505 (721)
+.|++++.+|+|+||+||+|+.. +++.||||++.............+.+.+|++++++++|||||++++++.+.+ ..
T Consensus 24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~--~~ 101 (351)
T 3c0i_A 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDG--ML 101 (351)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EE
T ss_pred cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC--EE
Confidence 44678889999999999999864 6889999998643221111112467999999999999999999999998877 67
Q ss_pred EEEEecCCCCChhhhhhhc--cCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCc---EEEeccCC
Q 004979 506 MMVFEYSPNGSLFEHLHIQ--EAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYA---AKISDFSF 580 (721)
Q Consensus 506 ~lV~Ey~~~GsL~~~l~~~--~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~---~kL~DFGl 580 (721)
++||||+++|+|.+++... ....+++..+..++.||+.||+|||+++ |+||||||+|||++.++. +||+|||+
T Consensus 102 ~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~--ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~ 179 (351)
T 3c0i_A 102 YMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN--IIHRDVKPHCVLLASKENSAPVKLGGFGV 179 (351)
T ss_dssp EEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECSSSTTCCEEECCCTT
T ss_pred EEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCChHHeEEecCCCCCcEEEecCcc
Confidence 9999999999998887543 2345899999999999999999999998 999999999999986654 99999998
Q ss_pred CCCC---------CCCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCccccC
Q 004979 581 WNNT---------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVD 651 (721)
Q Consensus 581 a~~~---------~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d 651 (721)
++.. ..++..|+|||.+....++.++|||||||++|||+||+.||... ..+....+..+.....
T Consensus 180 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~---~~~~~~~i~~~~~~~~---- 252 (351)
T 3c0i_A 180 AIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGT---KERLFEGIIKGKYKMN---- 252 (351)
T ss_dssp CEECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSS---HHHHHHHHHHTCCCCC----
T ss_pred eeEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCc---HHHHHHHHHcCCCCCC----
Confidence 7532 23456799999999999999999999999999999999999643 2333333333322111
Q ss_pred CccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004979 652 PTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 688 (721)
Q Consensus 652 ~~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 688 (721)
+ ......+.++.+|+.+||+.||++||++.|+++
T Consensus 253 ~---~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 253 P---RQWSHISESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp H---HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred c---cccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 0 011234567899999999999999999999986
No 71
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=6.1e-40 Score=350.21 Aligned_cols=266 Identities=20% Similarity=0.313 Sum_probs=198.2
Q ss_pred hhhCcCCCCceeEEEEEEec-CCcE----EEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCce
Q 004979 430 NIIGSFSDGTVGTVYKGTLS-SGVE----IAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFT 504 (721)
Q Consensus 430 ~ii~~lg~G~~g~Vyk~~~~-~~~~----vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~ 504 (721)
++++.+|+|+||+||+|++. ++.. |++|.+...... .....+.+|+.++++++||||+++++++.+. .
T Consensus 16 ~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~----~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~---~ 88 (325)
T 3kex_A 16 RKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGR----QSFQAVTDHMLAIGSLDHAHIVRLLGLCPGS---S 88 (325)
T ss_dssp EEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSC----SCBCSCCHHHHHHHTCCCTTBCCEEEEECBS---S
T ss_pred eeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccH----HHHHHHHHHHHHHhcCCCCCcCeEEEEEcCC---c
Confidence 67788999999999999964 4444 666665432211 1124578899999999999999999998643 4
Q ss_pred EEEEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCC
Q 004979 505 RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT 584 (721)
Q Consensus 505 ~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~ 584 (721)
.++||||+++|+|.+++... ...+++..+..|+.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 89 ~~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~ 165 (325)
T 3kex_A 89 LQLVTQYLPLGSLLDHVRQH-RGALGPQLLLNWGVQIAKGMYYLEEHG--MVHRNLAARNVLLKSPSQVQVADFGVADLL 165 (325)
T ss_dssp EEEEEECCTTCBSHHHHHSS-GGGSCTTHHHHHHHHHHHHHHHHHHTT--CCCSCCSSTTEEESSSSCEEECSCSGGGGS
T ss_pred cEEEEEeCCCCCHHHHHHHc-cccCCHHHHHHHHHHHHHHHHHHHhCC--CCCCccchheEEECCCCeEEECCCCccccc
Confidence 68999999999999998643 346889999999999999999999998 999999999999999999999999998643
Q ss_pred CC-----------CCccccchhhcccCCCCCCccHHHHHHHHHHHHh-CCCcccCCCCCHHHHHHHHhhcCCCCccccCC
Q 004979 585 TA-----------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDP 652 (721)
Q Consensus 585 ~~-----------~~~~~~apE~~~~~~~s~ksDVwSfGvvL~Ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 652 (721)
.. ++..|+|||.+.+..++.++|||||||++|||+| |+.||...... +.......+...
T Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~~~~~~~~~~------- 236 (325)
T 3kex_A 166 PPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLA--EVPDLLEKGERL------- 236 (325)
T ss_dssp CCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTT--HHHHHHHTTCBC-------
T ss_pred CcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHH--HHHHHHHcCCCC-------
Confidence 21 2336999999999999999999999999999999 99999744322 222222222110
Q ss_pred ccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcC------------CCCCCCCCChhHHHHHHhhh
Q 004979 653 TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAME------------PDGATPKLSPLWWAELEILS 717 (721)
Q Consensus 653 ~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~i~~~~------------~~~~~p~~~~~~~~~l~~~~ 717 (721)
..+..++.++.+++.+||+.||++||++.|+++.|+++.... .....|....+.|..++..+
T Consensus 237 ---~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 310 (325)
T 3kex_A 237 ---AQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARDPPRYLVIKRESGPGIAPGPEPHGLTNKKLEEVE 310 (325)
T ss_dssp ---CCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTSHHHHBCCCSSSSCCCBCCCCCCC----------
T ss_pred ---CCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcchhhhccccCCCCCCCCCCccccchhhcccccc
Confidence 111223446788999999999999999999999999875421 12234566677887766543
No 72
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=3.1e-39 Score=345.48 Aligned_cols=248 Identities=13% Similarity=0.170 Sum_probs=200.5
Q ss_pred hhhCcCCCCceeEEEEEEe-cCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcC-CCCccceEeEEEecCCCceEEE
Q 004979 430 NIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPFTRMM 507 (721)
Q Consensus 430 ~ii~~lg~G~~g~Vyk~~~-~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l-~H~nIv~l~g~~~~~~~~~~~l 507 (721)
++++.+|+|+||+||+|+. .+++.||||++...... +.+.+|+++++++ +||||+++++++...+ ..++
T Consensus 12 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-------~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~--~~~l 82 (330)
T 2izr_A 12 RVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRA-------PQLHLEYRFYKQLGSGDGIPQVYYFGPCGK--YNAM 82 (330)
T ss_dssp EEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCSS-------CCHHHHHHHHHHHCSCTTSCCEEEEEEETT--EEEE
T ss_pred EEEEEeeccCCceEEEEEECCCCcEEEEEEeccccch-------HHHHHHHHHHHHhhCCCCCCEEEEEEecCC--ccEE
Confidence 6778899999999999995 57889999987644321 3588999999999 9999999999998876 6799
Q ss_pred EEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCc-----EEEeccCCCC
Q 004979 508 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYA-----AKISDFSFWN 582 (721)
Q Consensus 508 V~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~-----~kL~DFGla~ 582 (721)
||||+ +|+|.+++... ...+++..+..|+.|++.||+|||+.+ |+||||||+|||++.++. +||+|||+++
T Consensus 83 v~e~~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~--iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~ 158 (330)
T 2izr_A 83 VLELL-GPSLEDLFDLC-DRTFSLKTVLMIAIQLISRMEYVHSKN--LIYRDVKPENFLIGRPGNKTQQVIHIIDFALAK 158 (330)
T ss_dssp EEECC-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECCGGGTCTTSEEECCCTTCE
T ss_pred EEEeC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCHHHeeeccCCCCCCceEEEEEcccce
Confidence 99999 99999998643 457999999999999999999999998 999999999999998887 9999999875
Q ss_pred CC----------------CCCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCC-CCHHHHHHHHhhcCCC
Q 004979 583 NT----------------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIEN-GSLENWASEYLKGEQP 645 (721)
Q Consensus 583 ~~----------------~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~-~~~~~~~~~~~~~~~~ 645 (721)
.. ..++..|+|||.+.+..++.++|||||||++|||+||+.||.... ....+....+.....+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~ 238 (330)
T 2izr_A 159 EYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRA 238 (330)
T ss_dssp ESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHH
T ss_pred eeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhcc
Confidence 32 234568999999999999999999999999999999999997543 2333333332211110
Q ss_pred CccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcC
Q 004979 646 LKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAME 697 (721)
Q Consensus 646 ~~~~~d~~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 697 (721)
.. ........+ ++.+++..||+.||.+||++.+|.+.|+++.+..
T Consensus 239 ~~------~~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~ 283 (330)
T 2izr_A 239 TP------IEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRK 283 (330)
T ss_dssp SC------HHHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred CC------HHHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHc
Confidence 00 000111233 8999999999999999999999999999887654
No 73
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.7e-39 Score=342.22 Aligned_cols=241 Identities=17% Similarity=0.249 Sum_probs=198.7
Q ss_pred hhhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEEE
Q 004979 429 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 507 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~l 507 (721)
|++.+.+|+|+||+||+|+.. ++..+|+|.+.... .....+.+|++++++++||||+++++++.+.+ ..++
T Consensus 7 y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~------~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~--~~~l 78 (321)
T 1tki_A 7 YMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG------TDQVLVKKEISILNIARHRNILHLHESFESME--ELVM 78 (321)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT------HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETT--EEEE
T ss_pred eEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc------ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCC--EEEE
Confidence 467788999999999999965 57789999876432 23456889999999999999999999998877 6799
Q ss_pred EEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCC--CCcEEEeccCCCCCCC
Q 004979 508 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTE--DYAAKISDFSFWNNTT 585 (721)
Q Consensus 508 V~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~--~~~~kL~DFGla~~~~ 585 (721)
||||+++|+|.+++.. ....+++..+..++.|++.||+|||+.+ |+||||||+|||++. ++.+||+|||+++...
T Consensus 79 v~e~~~g~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~g--ivH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~ 155 (321)
T 1tki_A 79 IFEFISGLDIFERINT-SAFELNEREIVSYVHQVCEALQFLHSHN--IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLK 155 (321)
T ss_dssp EECCCCCCBHHHHHTS-SSCCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEESSSSCCCEEECCCTTCEECC
T ss_pred EEEeCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC--CCcCCCCHHHEEEccCCCCCEEEEECCCCeECC
Confidence 9999999999999853 3346999999999999999999999998 999999999999997 7899999999986542
Q ss_pred C--------CCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccc
Q 004979 586 A--------AKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSF 657 (721)
Q Consensus 586 ~--------~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 657 (721)
. ++..|+|||.+.+..++.++|||||||++|||+||+.||... ...+....+..+...... ..
T Consensus 156 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~--~~~~~~~~i~~~~~~~~~-------~~ 226 (321)
T 1tki_A 156 PGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAE--TNQQIIENIMNAEYTFDE-------EA 226 (321)
T ss_dssp TTCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCS--SHHHHHHHHHHTCCCCCH-------HH
T ss_pred CCCccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCC--CHHHHHHHHHcCCCCCCh-------hh
Confidence 2 455799999998888999999999999999999999999643 334444444444322110 11
Q ss_pred cHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004979 658 QENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 689 (721)
Q Consensus 658 ~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 689 (721)
....+.++.+++.+||+.||++|||+.|+++.
T Consensus 227 ~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~h 258 (321)
T 1tki_A 227 FKEISIEAMDFVDRLLVKERKSRMTASEALQH 258 (321)
T ss_dssp HTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred hccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 12345788999999999999999999999873
No 74
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=2.1e-39 Score=369.45 Aligned_cols=246 Identities=22% Similarity=0.348 Sum_probs=204.5
Q ss_pred hhhCcCCCCceeEEEEEEecCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEEEEE
Q 004979 430 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 509 (721)
Q Consensus 430 ~ii~~lg~G~~g~Vyk~~~~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~lV~ 509 (721)
++.+.||+|+||+||+|++..+..||||++..... ..+.|.+|+++|++++|||||++++++.+ + ..++||
T Consensus 270 ~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~------~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~--~~~lv~ 340 (535)
T 2h8h_A 270 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM------SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-E--PIYIVT 340 (535)
T ss_dssp EEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSS------CHHHHHHHHHHHHHCCCTTBCCEEEEECS-S--SCEEEE
T ss_pred hhheecccCCCeEEEEEEECCCceEEEEEeCCCCC------CHHHHHHHHHHHHhCCCCCEeeEEEEEee-c--cceEee
Confidence 66788999999999999998888899998864321 13579999999999999999999999976 3 468999
Q ss_pred ecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCCCC---
Q 004979 510 EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA--- 586 (721)
Q Consensus 510 Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~~~--- 586 (721)
||+++|+|.++++......+++..++.|+.||+.||+|||+++ |+||||||+|||+++++.+||+|||+++....
T Consensus 341 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~--ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 418 (535)
T 2h8h_A 341 EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNEY 418 (535)
T ss_dssp CCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHH
T ss_pred ehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeCCCCCHhhEEEcCCCcEEEcccccceecCCCce
Confidence 9999999999997544566999999999999999999999998 99999999999999999999999999875421
Q ss_pred -------CCccccchhhcccCCCCCCccHHHHHHHHHHHHh-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004979 587 -------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 658 (721)
Q Consensus 587 -------~~~~~~apE~~~~~~~s~ksDVwSfGvvL~Ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 658 (721)
++..|+|||.+....++.++|||||||++|||+| |+.||... ...+....+..+.. . ..+
T Consensus 419 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~--~~~~~~~~i~~~~~-~---------~~~ 486 (535)
T 2h8h_A 419 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM--VNREVLDQVERGYR-M---------PCP 486 (535)
T ss_dssp HTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTC--CHHHHHHHHHTTCC-C---------CCC
T ss_pred ecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--CHHHHHHHHHcCCC-C---------CCC
Confidence 2346999999998999999999999999999999 99999633 33333333332211 1 122
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCC
Q 004979 659 ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEP 698 (721)
Q Consensus 659 ~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 698 (721)
..++.++.+||.+||+.||++||++.+|++.|+++.....
T Consensus 487 ~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~~ 526 (535)
T 2h8h_A 487 PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE 526 (535)
T ss_dssp TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCCCS
T ss_pred CCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhccC
Confidence 3456788999999999999999999999999998866443
No 75
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=3.4e-40 Score=365.42 Aligned_cols=248 Identities=19% Similarity=0.269 Sum_probs=196.8
Q ss_pred HhhhhhhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCc
Q 004979 425 CEDFSNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPF 503 (721)
Q Consensus 425 ~~~~~~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~ 503 (721)
+++| ++++.||+|+||+||+|+.. +++.||+|++....... ......+.+|+.++..++|||||+++++|.+.+
T Consensus 73 ~~~y-~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~--~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~-- 147 (437)
T 4aw2_A 73 REDF-EILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLK--RAETACFREERDVLVNGDSKWITTLHYAFQDDN-- 147 (437)
T ss_dssp GGGE-EEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHH--TTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSS--
T ss_pred hhhe-EEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhh--HHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCC--
Confidence 3444 67889999999999999976 47789999886432111 111234889999999999999999999999877
Q ss_pred eEEEEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCC
Q 004979 504 TRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN 583 (721)
Q Consensus 504 ~~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~ 583 (721)
..++|||||++|+|.+++.. ....+++..+..++.||+.||+|||+.+ ||||||||+|||++.++.+||+|||+++.
T Consensus 148 ~~~lV~Ey~~gg~L~~~l~~-~~~~l~e~~~~~~~~qi~~aL~~LH~~g--iiHrDLKp~NILl~~~g~vkL~DFGla~~ 224 (437)
T 4aw2_A 148 NLYLVMDYYVGGDLLTLLSK-FEDRLPEEMARFYLAEMVIAIDSVHQLH--YVHRDIKPDNILMDMNGHIRLADFGSCLK 224 (437)
T ss_dssp EEEEEECCCTTCBHHHHHHT-TTTCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EEEEEEecCCCCcHHHHHHH-ccCCCCHHHHHHHHHHHHHHHHHHHhCC--eEecccCHHHeeEcCCCCEEEcchhhhhh
Confidence 78999999999999999964 2456999999999999999999999998 99999999999999999999999999853
Q ss_pred C----------CCCCccccchhhcc-----cCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCcc
Q 004979 584 T----------TAAKTGSAAMELLE-----TSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKD 648 (721)
Q Consensus 584 ~----------~~~~~~~~apE~~~-----~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~ 648 (721)
. ..++..|+|||.+. ...++.++|||||||++|||+||+.||... +..+....++......
T Consensus 225 ~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~--~~~~~~~~i~~~~~~~-- 300 (437)
T 4aw2_A 225 LMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAE--SLVETYGKIMNHKERF-- 300 (437)
T ss_dssp CCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCS--SHHHHHHHHHTHHHHC--
T ss_pred cccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCC--ChhHHHHhhhhccccc--
Confidence 2 24567899999986 567899999999999999999999999643 3334444433221000
Q ss_pred ccCCccccccHHHHHHHHHHHHHcccCCCCC--CCCHHHHHH
Q 004979 649 IVDPTLKSFQENVLEELLVVIKNCVHPDPKQ--RPSMRGIAA 688 (721)
Q Consensus 649 ~~d~~l~~~~~~~~~~l~~li~~Cl~~dP~~--RPs~~evl~ 688 (721)
..+......+.++.+|+.+||..+|++ ||+++|+++
T Consensus 301 ----~~p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~ 338 (437)
T 4aw2_A 301 ----QFPTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKK 338 (437)
T ss_dssp ----CCCSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred ----cCCcccccCCHHHHHHHHHHhcccccccCCCCHHHHhC
Confidence 001111234567899999999988888 999999876
No 76
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=3.5e-39 Score=344.23 Aligned_cols=239 Identities=17% Similarity=0.290 Sum_probs=191.5
Q ss_pred hhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCC------
Q 004979 430 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEP------ 502 (721)
Q Consensus 430 ~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~------ 502 (721)
++++.+|+|+||+||+|+.. +++.||||++..... ....+.+.+|+++|++++|||||++++++.+...
T Consensus 9 ~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 84 (332)
T 3qd2_B 9 EPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNR----ELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE 84 (332)
T ss_dssp EEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCST----TTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred ceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCc----hhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence 77889999999999999976 789999999875432 2345679999999999999999999999865432
Q ss_pred -------------------------------------------------ceEEEEEecCCCCChhhhhhhcc-CCCCCHH
Q 004979 503 -------------------------------------------------FTRMMVFEYSPNGSLFEHLHIQE-AEHLDWA 532 (721)
Q Consensus 503 -------------------------------------------------~~~~lV~Ey~~~GsL~~~l~~~~-~~~l~~~ 532 (721)
...++||||+++|+|.+++.... .....+.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~ 164 (332)
T 3qd2_B 85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHG 164 (332)
T ss_dssp HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHH
T ss_pred hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhH
Confidence 12699999999999999997542 2346777
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCCC---------------------CCCccc
Q 004979 533 MRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT---------------------AAKTGS 591 (721)
Q Consensus 533 ~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~~---------------------~~~~~~ 591 (721)
.+..|+.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++... .++..|
T Consensus 165 ~~~~i~~qi~~aL~~LH~~~--ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y 242 (332)
T 3qd2_B 165 VCLHIFIQIAEAVEFLHSKG--LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLY 242 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGG
T ss_pred HHHHHHHHHHHHHHHHHhCC--eeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCc
Confidence 88999999999999999998 9999999999999999999999999875332 245679
Q ss_pred cchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHH
Q 004979 592 AAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKN 671 (721)
Q Consensus 592 ~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~ 671 (721)
+|||.+.+..++.++|||||||++|||+||..|+.. ........... ...........++.+++.+
T Consensus 243 ~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~----~~~~~~~~~~~----------~~~~~~~~~~~~~~~li~~ 308 (332)
T 3qd2_B 243 MSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQME----RVRIITDVRNL----------KFPLLFTQKYPQEHMMVQD 308 (332)
T ss_dssp SCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHH----HHHHHHHHHTT----------CCCHHHHHHCHHHHHHHHH
T ss_pred cChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhH----HHHHHHHhhcc----------CCCcccccCChhHHHHHHH
Confidence 999999999999999999999999999999776521 11111111111 1112234455678999999
Q ss_pred cccCCCCCCCCHHHHHH
Q 004979 672 CVHPDPKQRPSMRGIAA 688 (721)
Q Consensus 672 Cl~~dP~~RPs~~evl~ 688 (721)
||+.||++||++.|+++
T Consensus 309 ~l~~~p~~Rps~~~~l~ 325 (332)
T 3qd2_B 309 MLSPSPTERPEATDIIE 325 (332)
T ss_dssp HHCSSGGGSCCHHHHHH
T ss_pred HccCCCCcCCCHHHHhh
Confidence 99999999999999986
No 77
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=4.1e-39 Score=359.13 Aligned_cols=239 Identities=20% Similarity=0.252 Sum_probs=190.6
Q ss_pred hhhhCcCCCCceeEEEEEEe-cCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEEE
Q 004979 429 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 507 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~-~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~l 507 (721)
+++++.||+|+||.||+|+. .++..||||++...... .......+.+|++++++++||||+++++++.+.+ ..++
T Consensus 150 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~--~~~l 225 (446)
T 4ejn_A 150 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIV--AKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHD--RLCF 225 (446)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC---------------CCCCCSCTTSCCEEEEEEETT--EEEE
T ss_pred cEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhh--hhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCC--EEEE
Confidence 37788999999999999995 46889999998643211 1223456889999999999999999999999877 6799
Q ss_pred EEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhc-CCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCC--
Q 004979 508 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQ-LTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT-- 584 (721)
Q Consensus 508 V~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~-~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~-- 584 (721)
||||+++|+|.+++.. ...+++..+..++.||+.||+|||+ .+ |+||||||+|||++.++.+||+|||+++..
T Consensus 226 v~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~g--iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 301 (446)
T 4ejn_A 226 VMEYANGGELFFHLSR--ERVFSEDRARFYGAEIVSALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEGIK 301 (446)
T ss_dssp EECCCSSCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHHTC--CCCCCCCGGGEEECSSSCEEECCCCCCCTTCC
T ss_pred EEeeCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHhhcCC--EEECCCCHHHEEECCCCCEEEccCCCceeccC
Confidence 9999999999999864 3468999999999999999999997 87 999999999999999999999999998642
Q ss_pred -------CCCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccc
Q 004979 585 -------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSF 657 (721)
Q Consensus 585 -------~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 657 (721)
..++..|+|||.+.+..++.++|||||||++|||+||+.||... +..+....+......+
T Consensus 302 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~--~~~~~~~~i~~~~~~~----------- 368 (446)
T 4ejn_A 302 DGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ--DHEKLFELILMEEIRF----------- 368 (446)
T ss_dssp -----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHCCCCC-----------
T ss_pred CCcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCC--CHHHHHHHHHhCCCCC-----------
Confidence 23466899999999999999999999999999999999999633 3444444444332221
Q ss_pred cHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 004979 658 QENVLEELLVVIKNCVHPDPKQRP-----SMRGIAA 688 (721)
Q Consensus 658 ~~~~~~~l~~li~~Cl~~dP~~RP-----s~~evl~ 688 (721)
+...+.++.+|+.+||+.||++|| ++.|+++
T Consensus 369 p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 369 PRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp CTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred CccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 223456789999999999999999 9999975
No 78
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=4.7e-39 Score=335.19 Aligned_cols=250 Identities=22% Similarity=0.360 Sum_probs=202.8
Q ss_pred hhhhCcCCCCceeEEEEEEecCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEEEE
Q 004979 429 SNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 508 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~lV 508 (721)
+++++.+|+|+||+||+|+..++..|++|++..... ..+.+.+|++++++++||||+++++++.+. ..++|
T Consensus 15 y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~------~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---~~~~v 85 (279)
T 1qpc_A 15 LKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM------SPDAFLAEANLMKQLQHQRLVRLYAVVTQE---PIYII 85 (279)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSS------CHHHHHHHHHHHHHCCCTTBCCEEEEECSS---SCEEE
T ss_pred hhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCcc------cHHHHHHHHHHHHhCCCcCcceEEEEEcCC---CcEEE
Confidence 367788999999999999988888999998864321 135789999999999999999999998754 35899
Q ss_pred EecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCCCC--
Q 004979 509 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA-- 586 (721)
Q Consensus 509 ~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~~~-- 586 (721)
|||+++|+|.+++.......+++..+..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++....
T Consensus 86 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 163 (279)
T 1qpc_A 86 TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN--YIHRDLRAANILVSDTLSCKIADFGLARLIEDNE 163 (279)
T ss_dssp EECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECTTSCEEECCCTTCEECSSSC
T ss_pred EecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHhhEEEcCCCCEEECCCcccccccCcc
Confidence 99999999999986443346999999999999999999999998 99999999999999999999999998753321
Q ss_pred --------CCccccchhhcccCCCCCCccHHHHHHHHHHHHh-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccc
Q 004979 587 --------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSF 657 (721)
Q Consensus 587 --------~~~~~~apE~~~~~~~s~ksDVwSfGvvL~Ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 657 (721)
++..|+|||.+....++.++|||||||++|||+| |+.||... ...+.......+... ..
T Consensus 164 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~--~~~~~~~~~~~~~~~----------~~ 231 (279)
T 1qpc_A 164 YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM--TNPEVIQNLERGYRM----------VR 231 (279)
T ss_dssp EECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTC--CHHHHHHHHHTTCCC----------CC
T ss_pred cccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCccc--CHHHHHHHHhcccCC----------CC
Confidence 2336899999988889999999999999999999 99999633 333333333322111 11
Q ss_pred cHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCCCCC
Q 004979 658 QENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPDGA 701 (721)
Q Consensus 658 ~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~~ 701 (721)
+..++.++.+++.+||+.||++||++.++++.|+++........
T Consensus 232 ~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~~~ 275 (279)
T 1qpc_A 232 PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATEGQY 275 (279)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC----
T ss_pred cccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHhccCCC
Confidence 23345688999999999999999999999999999877655443
No 79
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2e-39 Score=347.66 Aligned_cols=239 Identities=22% Similarity=0.333 Sum_probs=194.7
Q ss_pred hhhhCcCCCCceeEEEEEEe-cCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEEE
Q 004979 429 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 507 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~-~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~l 507 (721)
|.+.+.+|+|+||+||+|+. .++..||+|++....... ......+.+|+++++.++||||+++++++...+ ..++
T Consensus 11 Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~--~~~l 86 (336)
T 3h4j_B 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKK--SDMHMRVEREISYLKLLRHPHIIKLYDVITTPT--DIVM 86 (336)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHH--TTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEE
T ss_pred EEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccc--hhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC--EEEE
Confidence 46778899999999999996 578899999886432111 112357899999999999999999999999877 6799
Q ss_pred EEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCCC--
Q 004979 508 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT-- 585 (721)
Q Consensus 508 V~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~~-- 585 (721)
||||+ +|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++...
T Consensus 87 v~E~~-~g~l~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~g--ivH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~ 161 (336)
T 3h4j_B 87 VIEYA-GGELFDYIVEK--KRMTEDEGRRFFQQIICAIEYCHRHK--IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDG 161 (336)
T ss_dssp EECCC-CEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHHT--CCCCCCSTTTEEECTTCCEEECCSSCTBTTTTS
T ss_pred EEECC-CCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC--eEecCCchhhEEEcCCCCEEEEEeccceeccCC
Confidence 99999 78999988643 46999999999999999999999988 9999999999999999999999999986432
Q ss_pred ------CCCccccchhhcccCCC-CCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004979 586 ------AAKTGSAAMELLETSAV-DLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 658 (721)
Q Consensus 586 ------~~~~~~~apE~~~~~~~-s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 658 (721)
.++..|+|||.+.+..+ +.++|||||||++|||+||+.||...... .....+.......+
T Consensus 162 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~-------------~~~~~i~~~~~~~p 228 (336)
T 3h4j_B 162 NFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIP-------------NLFKKVNSCVYVMP 228 (336)
T ss_dssp BTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSST-------------TCBCCCCSSCCCCC
T ss_pred cccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHH-------------HHHHHHHcCCCCCc
Confidence 34568999999987776 68999999999999999999999643211 11111111122233
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004979 659 ENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 689 (721)
Q Consensus 659 ~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 689 (721)
...+.++.+++.+||+.||.+|||+.|+++.
T Consensus 229 ~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 259 (336)
T 3h4j_B 229 DFLSPGAQSLIRRMIVADPMQRITIQEIRRD 259 (336)
T ss_dssp TTSCHHHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred ccCCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence 4456788999999999999999999999863
No 80
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=4.5e-39 Score=340.97 Aligned_cols=248 Identities=23% Similarity=0.369 Sum_probs=200.9
Q ss_pred hhhhCcCCCCceeEEEEEEe------cCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCC
Q 004979 429 SNIIGSFSDGTVGTVYKGTL------SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEP 502 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~------~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~ 502 (721)
+.+.+.+|+|+||.||+|+. .++..||||++.... .....+.+.+|++++++++||||+++++++.+.+
T Consensus 25 y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~- 99 (314)
T 2ivs_A 25 LVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA----SPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDG- 99 (314)
T ss_dssp EEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTC----CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS-
T ss_pred eeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCC----CHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCC-
Confidence 36778899999999999985 234789999886432 2334567999999999999999999999998876
Q ss_pred ceEEEEEecCCCCChhhhhhhccC----------------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCC
Q 004979 503 FTRMMVFEYSPNGSLFEHLHIQEA----------------------EHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNL 560 (721)
Q Consensus 503 ~~~~lV~Ey~~~GsL~~~l~~~~~----------------------~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDL 560 (721)
..++||||+++|+|.+++..... ..+++..+..++.||+.||+|||+++ |+||||
T Consensus 100 -~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--ivH~di 176 (314)
T 2ivs_A 100 -PLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK--LVHRDL 176 (314)
T ss_dssp -SCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTT--EECCCC
T ss_pred -ceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCC--Cccccc
Confidence 56999999999999999975322 34889999999999999999999998 999999
Q ss_pred CCCCeEeCCCCcEEEeccCCCCCCC-----------CCCccccchhhcccCCCCCCccHHHHHHHHHHHHh-CCCcccCC
Q 004979 561 QSSSIYLTEDYAAKISDFSFWNNTT-----------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIE 628 (721)
Q Consensus 561 Kp~NILl~~~~~~kL~DFGla~~~~-----------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~Ellt-G~~P~~~~ 628 (721)
||+|||+++++.+||+|||+++... .++..|+|||.+.+..++.++|||||||++|||+| |+.||...
T Consensus 177 kp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 256 (314)
T 2ivs_A 177 AARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI 256 (314)
T ss_dssp SGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred chheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 9999999999999999999875321 12345899999988889999999999999999999 99999643
Q ss_pred CCCHHHHHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhc
Q 004979 629 NGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAM 696 (721)
Q Consensus 629 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~i~~~ 696 (721)
.. .+.......+.. ...+..++.++.+++.+||+.||++||++.|+++.|+++...
T Consensus 257 ~~--~~~~~~~~~~~~----------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 312 (314)
T 2ivs_A 257 PP--ERLFNLLKTGHR----------MERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVK 312 (314)
T ss_dssp CG--GGHHHHHHTTCC----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred CH--HHHHHHhhcCCc----------CCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhh
Confidence 32 222222222111 112234557789999999999999999999999999998764
No 81
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=1.6e-38 Score=344.43 Aligned_cols=243 Identities=20% Similarity=0.283 Sum_probs=199.5
Q ss_pred hhhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEEE
Q 004979 429 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 507 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~l 507 (721)
+++++.+|+|+||.||+|+.. ++..||+|++..... .....+.+.+|++++++++|||||++++++.+.+ ..++
T Consensus 31 y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~---~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~--~~~l 105 (362)
T 2bdw_A 31 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL---SARDFQKLEREARICRKLQHPNIVRLHDSIQEES--FHYL 105 (362)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC---CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEE
T ss_pred eEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccC---CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC--EEEE
Confidence 477889999999999999965 688999999875432 2234567999999999999999999999998877 6799
Q ss_pred EEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCC---CcEEEeccCCCCCC
Q 004979 508 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTED---YAAKISDFSFWNNT 584 (721)
Q Consensus 508 V~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~---~~~kL~DFGla~~~ 584 (721)
||||+++|+|.+++.. ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.+ +.+||+|||+++..
T Consensus 106 v~e~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~al~~lH~~~--ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~ 181 (362)
T 2bdw_A 106 VFDLVTGGELFEDIVA--REFYSEADASHCIQQILESIAYCHSNG--IVHRNLKPENLLLASKAKGAAVKLADFGLAIEV 181 (362)
T ss_dssp EECCCCSCBHHHHHTT--CSCCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCSGGGEEESCSSTTCCEEECCCTTCBCC
T ss_pred EEecCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC--eEeccCchHHEEEecCCCCCCEEEeecCcceEe
Confidence 9999999999998863 356899999999999999999999998 9999999999999865 45999999998643
Q ss_pred C--------CCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccc
Q 004979 585 T--------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKS 656 (721)
Q Consensus 585 ~--------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 656 (721)
. .++..|+|||.+.+..++.++|||||||++|||+||+.||... +..+....+..+...... +
T Consensus 182 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~--~~~~~~~~i~~~~~~~~~---~---- 252 (362)
T 2bdw_A 182 NDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDE--DQHRLYAQIKAGAYDYPS---P---- 252 (362)
T ss_dssp TTCCSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHTCCCCCT---T----
T ss_pred cCCcccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCC--CHHHHHHHHHhCCCCCCc---c----
Confidence 2 3456799999999999999999999999999999999999643 334444444443222111 1
Q ss_pred ccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004979 657 FQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 689 (721)
Q Consensus 657 ~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 689 (721)
....++.++.+++.+||+.||++||++.|+++.
T Consensus 253 ~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 253 EWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp GGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred cccCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 112345778999999999999999999999864
No 82
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=2.9e-38 Score=351.06 Aligned_cols=242 Identities=19% Similarity=0.284 Sum_probs=198.4
Q ss_pred hhhhCcCCCCceeEEEEEEe-cCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEEE
Q 004979 429 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 507 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~-~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~l 507 (721)
|++++.||+|+||+||+|+. .++..+|+|++..+.. .....+.+.+|++++++++|||||++++++.+.+ ..++
T Consensus 13 Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~---~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~--~~~l 87 (444)
T 3soa_A 13 YQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKL---SARDHQKLEREARICRLLKHPNIVRLHDSISEEG--HHYL 87 (444)
T ss_dssp EEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSC---HHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSS--EEEE
T ss_pred eEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccC---CHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECC--EEEE
Confidence 47888999999999999985 4688899998875432 2334567999999999999999999999998877 6799
Q ss_pred EEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeC---CCCcEEEeccCCCCCC
Q 004979 508 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLT---EDYAAKISDFSFWNNT 584 (721)
Q Consensus 508 V~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~---~~~~~kL~DFGla~~~ 584 (721)
||||+++|+|.+++.. ...+++..+..++.||+.||+|||+.+ |+||||||+|||++ +++.+||+|||+++..
T Consensus 88 v~E~~~gg~L~~~i~~--~~~~~e~~~~~i~~qil~aL~~lH~~g--ivHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~ 163 (444)
T 3soa_A 88 IFDLVTGGELFEDIVA--REYYSEADASHCIQQILEAVLHCHQMG--VVHRNLKPENLLLASKLKGAAVKLADFGLAIEV 163 (444)
T ss_dssp EECCCBCCBHHHHHHH--CSCCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCSSTTEEESBSSTTCCEEECCCSSCBCC
T ss_pred EEEeCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCCHHHEEEeccCCCCcEEEccCceeEEe
Confidence 9999999999999864 356999999999999999999999998 99999999999998 5688999999998543
Q ss_pred C---------CCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccc
Q 004979 585 T---------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLK 655 (721)
Q Consensus 585 ~---------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 655 (721)
. .++..|+|||.+....++.++||||+||++|||++|+.||... +..+....+..+...... +.
T Consensus 164 ~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~--~~~~~~~~i~~~~~~~~~---~~-- 236 (444)
T 3soa_A 164 EGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDE--DQHRLYQQIKAGAYDFPS---PE-- 236 (444)
T ss_dssp CTTCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCS--SHHHHHHHHHHTCCCCCT---TT--
T ss_pred cCCCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCc--cHHHHHHHHHhCCCCCCc---cc--
Confidence 2 3456899999999999999999999999999999999999643 344444444444322111 11
Q ss_pred cccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004979 656 SFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 688 (721)
Q Consensus 656 ~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 688 (721)
....+.++.+|+.+||+.||++|||+.|+++
T Consensus 237 --~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~ 267 (444)
T 3soa_A 237 --WDTVTPEAKDLINKMLTINPSKRITAAEALK 267 (444)
T ss_dssp --TTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred --cccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 1234567899999999999999999999987
No 83
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1.4e-38 Score=328.98 Aligned_cols=244 Identities=20% Similarity=0.345 Sum_probs=203.0
Q ss_pred hhhCcCCCCceeEEEEEEecCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEEEEE
Q 004979 430 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 509 (721)
Q Consensus 430 ~ii~~lg~G~~g~Vyk~~~~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~lV~ 509 (721)
++++.+|+|+||.||+|+..++..|++|++...... .+.+.+|++++++++||||+++++++.+.+ ..++||
T Consensus 11 ~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~------~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~ 82 (267)
T 3t9t_A 11 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS------EEDFIEEAEVMMKLSHPKLVQLYGVCLEQA--PICLVT 82 (267)
T ss_dssp EEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTBC------HHHHHHHHHHHHTCCCTTBCCEEEEECSSS--SCEEEE
T ss_pred eeeeEecCCCceeEEEEEecCCCeEEEEEccccCCC------HHHHHHHHHHHHhCCCCCEeeEEEEEccCC--CeEEEE
Confidence 667889999999999999988889999988653321 257899999999999999999999998876 569999
Q ss_pred ecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCCC----
Q 004979 510 EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT---- 585 (721)
Q Consensus 510 Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~~---- 585 (721)
||+++|+|.+++... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++...
T Consensus 83 e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~ 159 (267)
T 3t9t_A 83 EFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEAC--VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY 159 (267)
T ss_dssp CCCTTCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHH
T ss_pred eCCCCCcHHHHHhhC-cccCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCchheEEECCCCCEEEcccccccccccccc
Confidence 999999999998643 356899999999999999999999998 9999999999999999999999999876431
Q ss_pred ------CCCccccchhhcccCCCCCCccHHHHHHHHHHHHh-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004979 586 ------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 658 (721)
Q Consensus 586 ------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~Ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 658 (721)
.++..|+|||.+....++.++||||||+++|||+| |+.||... ...+.......+.... .+
T Consensus 160 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~--~~~~~~~~i~~~~~~~----------~~ 227 (267)
T 3t9t_A 160 TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENR--SNSEVVEDISTGFRLY----------KP 227 (267)
T ss_dssp HSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC--CHHHHHHHHHTTCCCC----------CC
T ss_pred cccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCC--CHHHHHHHHhcCCcCC----------CC
Confidence 22346899999998899999999999999999999 89999633 3334444433321110 11
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhc
Q 004979 659 ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAM 696 (721)
Q Consensus 659 ~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~i~~~ 696 (721)
...+.++.+++.+||+.||++||++.|+++.|+++.+.
T Consensus 228 ~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (267)
T 3t9t_A 228 RLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 265 (267)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred ccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 23356788999999999999999999999999998763
No 84
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=4.7e-39 Score=343.22 Aligned_cols=241 Identities=20% Similarity=0.318 Sum_probs=193.5
Q ss_pred hhhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEEE
Q 004979 429 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 507 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~l 507 (721)
+++++.+|+|+||+||+|+.. +++.||||++..+... ...+.+.+|+.++++++|||||++++++.+.+ ..++
T Consensus 9 y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~--~~~l 82 (323)
T 3tki_A 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV----DCPENIKKEICINKMLNHENVVKFYGHRREGN--IQYL 82 (323)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-----------CHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEE
T ss_pred ceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEccccc----chHHHHHHHHHHHHhCCCCCCCeEEEEEecCC--eEEE
Confidence 367888999999999999965 7889999998654322 22356889999999999999999999999877 6799
Q ss_pred EEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCC----
Q 004979 508 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN---- 583 (721)
Q Consensus 508 V~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~---- 583 (721)
||||+++|+|.+++. ....+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 83 v~e~~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~aL~~LH~~g--ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 158 (323)
T 3tki_A 83 FLEYCSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYN 158 (323)
T ss_dssp EEECCTTEEGGGGSB--TTTBCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECTTCCEEECCCTTCEECEET
T ss_pred EEEcCCCCcHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccccchHHEEEeCCCCEEEEEeeccceeccC
Confidence 999999999999985 3346999999999999999999999998 99999999999999999999999999852
Q ss_pred -------CCCCCccccchhhcccCCC-CCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccc
Q 004979 584 -------TTAAKTGSAAMELLETSAV-DLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLK 655 (721)
Q Consensus 584 -------~~~~~~~~~apE~~~~~~~-s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 655 (721)
...++..|+|||.+.+..+ +.++|||||||++|||+||+.||.........+.. ........
T Consensus 159 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~-~~~~~~~~--------- 228 (323)
T 3tki_A 159 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSD-WKEKKTYL--------- 228 (323)
T ss_dssp TEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHH-HHTTCTTS---------
T ss_pred CcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHH-HhcccccC---------
Confidence 2235667999999977765 78899999999999999999999754433222221 11111110
Q ss_pred cccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004979 656 SFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 689 (721)
Q Consensus 656 ~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 689 (721)
......+.++.+|+.+||+.||++|||+.|+++.
T Consensus 229 ~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 229 NPWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred CccccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 0113345678899999999999999999999763
No 85
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=1e-38 Score=349.45 Aligned_cols=250 Identities=17% Similarity=0.253 Sum_probs=196.1
Q ss_pred hhhhCcCCCC--ceeEEEEEEec-CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceE
Q 004979 429 SNIIGSFSDG--TVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTR 505 (721)
Q Consensus 429 ~~ii~~lg~G--~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~ 505 (721)
|++++.+|+| +||+||+|+.. +++.||||++..... .....+.+.+|++++++++|||||++++++.+.+ ..
T Consensus 27 y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~ 101 (389)
T 3gni_B 27 YELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEAC---SNEMVTFLQGELHVSKLFNHPNIVPYRATFIADN--EL 101 (389)
T ss_dssp EEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGS---CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EE
T ss_pred EEEEecccCCcCCceEEEEEEEcCCCCEEEEEEeccccc---ChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECC--EE
Confidence 4778889999 99999999975 689999999875432 2344567899999999999999999999999877 67
Q ss_pred EEEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCC-
Q 004979 506 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT- 584 (721)
Q Consensus 506 ~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~- 584 (721)
++|||||++|+|.+++.......+++..+..|+.||+.||+|||+++ |+||||||+|||++.++.+||+|||.+...
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~--ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~ 179 (389)
T 3gni_B 102 WVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMG--YVHRSVKASHILISVDGKVYLSGLRSNLSMI 179 (389)
T ss_dssp EEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTCCEEECCGGGCEECE
T ss_pred EEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEcCCCCEEEcccccceeec
Confidence 99999999999999997655567999999999999999999999998 999999999999999999999999975321
Q ss_pred ---------------CCCCccccchhhccc--CCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCc
Q 004979 585 ---------------TAAKTGSAAMELLET--SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLK 647 (721)
Q Consensus 585 ---------------~~~~~~~~apE~~~~--~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~ 647 (721)
..++..|+|||.+.+ ..++.++|||||||++|||+||+.||........ ......+.. .
T Consensus 180 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~--~~~~~~~~~--~ 255 (389)
T 3gni_B 180 SHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQM--LLEKLNGTV--P 255 (389)
T ss_dssp ETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTH--HHHC--------
T ss_pred cccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHH--HHHHhcCCC--C
Confidence 134456899999977 6799999999999999999999999974332111 111111000 0
Q ss_pred cccC-------------------------------------CccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004979 648 DIVD-------------------------------------PTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 689 (721)
Q Consensus 648 ~~~d-------------------------------------~~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 689 (721)
.+.+ ..........+.++.+|+.+||+.||++|||+.|+++.
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~h 334 (389)
T 3gni_B 256 CLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 334 (389)
T ss_dssp --------------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred ccccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcC
Confidence 0000 00001223345679999999999999999999999864
No 86
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=9.6e-39 Score=338.71 Aligned_cols=259 Identities=20% Similarity=0.277 Sum_probs=201.8
Q ss_pred hhhhCcCCCCceeEEEEEEe-cCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCc--eE
Q 004979 429 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPF--TR 505 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~-~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~--~~ 505 (721)
+++.+.+|+|+||+||+|+. .+++.||||++...... .......+.+|++++.+++||||+++++++...... ..
T Consensus 14 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 91 (311)
T 3ork_A 14 YELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLAR--DPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLP 91 (311)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTT--SHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred EEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccC--CHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCccc
Confidence 46788899999999999995 57889999988654322 234456799999999999999999999998764321 34
Q ss_pred EEEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCCC
Q 004979 506 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT 585 (721)
Q Consensus 506 ~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~~ 585 (721)
++||||+++|+|.++++.. ..+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++...
T Consensus 92 ~lv~e~~~g~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~ 167 (311)
T 3ork_A 92 YIVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALNFSHQNG--IIHRDVKPANIMISATNAVKVMDFGIARAIA 167 (311)
T ss_dssp EEEEECCCEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEEETTSCEEECCCSCC----
T ss_pred EEEEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC--CCcCCCCHHHEEEcCCCCEEEeeccCccccc
Confidence 8999999999999998643 46899999999999999999999998 9999999999999999999999999986321
Q ss_pred ------------CCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCccccCCc
Q 004979 586 ------------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPT 653 (721)
Q Consensus 586 ------------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 653 (721)
.++..|+|||.+.+..++.++|||||||++|||+||+.||... ...+..............
T Consensus 168 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~--~~~~~~~~~~~~~~~~~~----- 240 (311)
T 3ork_A 168 DSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGD--SPVSVAYQHVREDPIPPS----- 240 (311)
T ss_dssp --------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCS--SHHHHHHHHHHCCCCCHH-----
T ss_pred ccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCC--ChHHHHHHHhcCCCCCcc-----
Confidence 2466799999999999999999999999999999999999643 333333333332211110
Q ss_pred cccccHHHHHHHHHHHHHcccCCCCCCCCHHH-HHHHHHHhhhcCCCCCC
Q 004979 654 LKSFQENVLEELLVVIKNCVHPDPKQRPSMRG-IAAKLKEITAMEPDGAT 702 (721)
Q Consensus 654 l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~e-vl~~L~~i~~~~~~~~~ 702 (721)
.....++.++.+++.+||+.||++||++.+ +...+.++....+....
T Consensus 241 --~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~~~~~~~~ 288 (311)
T 3ork_A 241 --ARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPEAP 288 (311)
T ss_dssp --HHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHTTCCCSSC
T ss_pred --cccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHhcCCCCCCC
Confidence 111234577899999999999999996554 55667776665544433
No 87
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=8.5e-39 Score=363.06 Aligned_cols=242 Identities=19% Similarity=0.242 Sum_probs=199.1
Q ss_pred hhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEEEE
Q 004979 430 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 508 (721)
Q Consensus 430 ~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~lV 508 (721)
++++.||+|+||.||+|+.. ++..||+|++....... ......+.+|+++|.+++|||||++++++.+.+ ..++|
T Consensus 187 ~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~--~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~--~l~lV 262 (576)
T 2acx_A 187 RQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKK--RKGEAMALNEKQILEKVNSRFVVSLAYAYETKD--ALCLV 262 (576)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHH--TTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEE
T ss_pred EEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhh--hHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCC--EEEEE
Confidence 56778999999999999965 78999999986543211 122456889999999999999999999998877 78999
Q ss_pred EecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCC----
Q 004979 509 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT---- 584 (721)
Q Consensus 509 ~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~---- 584 (721)
|||+++|+|.+++.......+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 263 mEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~g--IvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~ 340 (576)
T 2acx_A 263 LTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRER--IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ 340 (576)
T ss_dssp ECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECTTSCEEECCCTTCEECCTTC
T ss_pred EEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC--EeccCCchheEEEeCCCCeEEEecccceecccCc
Confidence 99999999999987555556999999999999999999999998 999999999999999999999999998643
Q ss_pred ----CCCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCCC--CHHHHHHHHhhcCCCCccccCCcccccc
Q 004979 585 ----TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENG--SLENWASEYLKGEQPLKDIVDPTLKSFQ 658 (721)
Q Consensus 585 ----~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~--~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 658 (721)
..++..|+|||.+.+..++.++|||||||++|||+||+.||..... ...+....+...... ++
T Consensus 341 ~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~~~~~-----------~p 409 (576)
T 2acx_A 341 TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEE-----------YS 409 (576)
T ss_dssp CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHHCCCC-----------CC
T ss_pred cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhccccc-----------CC
Confidence 2346679999999988999999999999999999999999975432 223333332222111 22
Q ss_pred HHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 004979 659 ENVLEELLVVIKNCVHPDPKQRP-----SMRGIAA 688 (721)
Q Consensus 659 ~~~~~~l~~li~~Cl~~dP~~RP-----s~~evl~ 688 (721)
...+.++.+|+.+||+.||++|| ++.||++
T Consensus 410 ~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~ 444 (576)
T 2acx_A 410 ERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKE 444 (576)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred ccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence 34457889999999999999999 7788875
No 88
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=1.7e-38 Score=337.94 Aligned_cols=249 Identities=20% Similarity=0.278 Sum_probs=182.8
Q ss_pred hhhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEEE
Q 004979 429 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 507 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~l 507 (721)
+++++.+|+|+||+||+|+.. +++.||+|++....... ..+.+.+|++++++++|||||++++++.+.+ ..++
T Consensus 7 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~----~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~l 80 (317)
T 2pmi_A 7 FKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEG----TPSTAIREISLMKELKHENIVRLYDVIHTEN--KLTL 80 (317)
T ss_dssp ------------CEEEEEECSSSCCEEEEEEEECCSTTC----SCHHHHHHHHHHTTCCBTTBCCEEEEECCTT--EEEE
T ss_pred eeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccc----cHHHHHHHHHHHHhcCCCCcceEEEEEEECC--eEEE
Confidence 367889999999999999864 68899999887543221 2256889999999999999999999998876 6799
Q ss_pred EEecCCCCChhhhhhhcc----CCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCC
Q 004979 508 VFEYSPNGSLFEHLHIQE----AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN 583 (721)
Q Consensus 508 V~Ey~~~GsL~~~l~~~~----~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~ 583 (721)
||||++ |+|.+++.... ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 81 v~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~--ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~ 157 (317)
T 2pmi_A 81 VFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK--ILHRDLKPQNLLINKRGQLKLGDFGLARA 157 (317)
T ss_dssp EEECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECTTCCEEECCCSSCEE
T ss_pred EEEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCC--eeeCCCChHHeEEcCCCCEEECcCcccee
Confidence 999998 69999886432 245899999999999999999999998 99999999999999999999999998753
Q ss_pred CC---------CCCccccchhhccc-CCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCccc----
Q 004979 584 TT---------AAKTGSAAMELLET-SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDI---- 649 (721)
Q Consensus 584 ~~---------~~~~~~~apE~~~~-~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~---- 649 (721)
.. .++..|+|||.+.+ ..++.++|||||||++|||+||+.||.... ..+....+..........
T Consensus 158 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~--~~~~~~~i~~~~~~~~~~~~~~ 235 (317)
T 2pmi_A 158 FGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTN--DEEQLKLIFDIMGTPNESLWPS 235 (317)
T ss_dssp TTSCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHHHHHCSCCTTTCGG
T ss_pred cCCCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC--hHHHHHHHHHHhCCCChhHhhh
Confidence 21 24567999999875 468999999999999999999999996433 222222222110000000
Q ss_pred ------cCCcc-------------ccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004979 650 ------VDPTL-------------KSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 688 (721)
Q Consensus 650 ------~d~~l-------------~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 688 (721)
..+.. .......+.++.+++.+||+.||++|||+.|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 293 (317)
T 2pmi_A 236 VTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH 293 (317)
T ss_dssp GGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence 00000 0011134568999999999999999999999875
No 89
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=7.6e-40 Score=359.84 Aligned_cols=241 Identities=19% Similarity=0.256 Sum_probs=194.3
Q ss_pred hhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEEEE
Q 004979 430 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 508 (721)
Q Consensus 430 ~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~lV 508 (721)
++++.||+|+||+||+|+.. ++..+|+|++....... ....+.+.+|+++++.++|||||++++++.+.+ ..|+|
T Consensus 72 ~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~--~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~--~~~lV 147 (410)
T 3v8s_A 72 EVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIK--RSDSAFFWEERDIMAFANSPWVVQLFYAFQDDR--YLYMV 147 (410)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHH--TCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEE
T ss_pred EEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhh--hHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECC--EEEEE
Confidence 77889999999999999975 57889999886432111 111235889999999999999999999999877 78999
Q ss_pred EecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCC-----
Q 004979 509 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN----- 583 (721)
Q Consensus 509 ~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~----- 583 (721)
|||+++|+|.++++. ..+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++.
T Consensus 148 ~E~~~gg~L~~~l~~---~~~~e~~~~~~~~qi~~aL~~LH~~g--ivHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~ 222 (410)
T 3v8s_A 148 MEYMPGGDLVNLMSN---YDVPEKWARFYTAEVVLALDAIHSMG--FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG 222 (410)
T ss_dssp ECCCTTEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTSCEEECCCTTCEECCTTS
T ss_pred EeCCCCCcHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC--eEeccCCHHHeeECCCCCEEEeccceeEeeccCC
Confidence 999999999999863 35899999999999999999999998 99999999999999999999999999853
Q ss_pred -----CCCCCccccchhhcccCC----CCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcc
Q 004979 584 -----TTAAKTGSAAMELLETSA----VDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTL 654 (721)
Q Consensus 584 -----~~~~~~~~~apE~~~~~~----~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 654 (721)
...++..|+|||.+.... ++.++|||||||++|||+||+.||... +..+....+........ -+.
T Consensus 223 ~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~--~~~~~~~~i~~~~~~~~---~p~- 296 (410)
T 3v8s_A 223 MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD--SLVGTYSKIMNHKNSLT---FPD- 296 (410)
T ss_dssp EEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCS--SHHHHHHHHHTHHHHCC---CCT-
T ss_pred cccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCC--ChhhHHHHHHhcccccc---CCC-
Confidence 233567899999987655 789999999999999999999999643 33444444433211000 000
Q ss_pred ccccHHHHHHHHHHHHHcccCCCCC--CCCHHHHHH
Q 004979 655 KSFQENVLEELLVVIKNCVHPDPKQ--RPSMRGIAA 688 (721)
Q Consensus 655 ~~~~~~~~~~l~~li~~Cl~~dP~~--RPs~~evl~ 688 (721)
....+.++.+|+.+||+.+|.+ ||+++||++
T Consensus 297 ---~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~ 329 (410)
T 3v8s_A 297 ---DNDISKEAKNLICAFLTDREVRLGRNGVEEIKR 329 (410)
T ss_dssp ---TCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHT
T ss_pred ---cccccHHHHHHHHHHccChhhhCCCCCHHHHhc
Confidence 1124567899999999999988 999999986
No 90
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=1.7e-38 Score=336.25 Aligned_cols=256 Identities=20% Similarity=0.340 Sum_probs=202.3
Q ss_pred hhhhCcCCCCceeEEEEEEe-cCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEEE
Q 004979 429 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 507 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~-~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~l 507 (721)
+++.+.+|+|+||.||+|+. .++..||+|++......+ ......+.+|++++++++||||+++++++...+ ..++
T Consensus 34 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~l 109 (310)
T 2wqm_A 34 FRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMD--AKARADCIKEIDLLKQLNHPNVIKYYASFIEDN--ELNI 109 (310)
T ss_dssp EEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCC--HHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT--EEEE
T ss_pred eEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccC--HHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC--cEEE
Confidence 36778899999999999996 578899999886533222 334577999999999999999999999998877 6799
Q ss_pred EEecCCCCChhhhhhhc--cCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCCC
Q 004979 508 VFEYSPNGSLFEHLHIQ--EAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT 585 (721)
Q Consensus 508 V~Ey~~~GsL~~~l~~~--~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~~ 585 (721)
||||+++|+|.+++... ....+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++...
T Consensus 110 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~--i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~ 187 (310)
T 2wqm_A 110 VLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRR--VMHRDIKPANVFITATGVVKLGDLGLGRFFS 187 (310)
T ss_dssp EEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTSCEEECCC-------
T ss_pred EEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCC--eeCCCCcHHHEEEcCCCCEEEEeccceeeec
Confidence 99999999999998642 3456899999999999999999999998 9999999999999999999999999875322
Q ss_pred ---------CCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccc
Q 004979 586 ---------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKS 656 (721)
Q Consensus 586 ---------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 656 (721)
.++..|+|||.+....++.++|||||||++|||+||+.||...................+ ...
T Consensus 188 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~------ 259 (310)
T 2wqm_A 188 SKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYP--PLP------ 259 (310)
T ss_dssp -----------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTTCSC--CCC------
T ss_pred CCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhcccCC--CCc------
Confidence 245578999999999999999999999999999999999976555555554444332211 110
Q ss_pred ccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCCC
Q 004979 657 FQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPD 699 (721)
Q Consensus 657 ~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~ 699 (721)
....+.++.+++.+||+.||++||++.||++.|+++.+....
T Consensus 260 -~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~~ 301 (310)
T 2wqm_A 260 -SDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTAS 301 (310)
T ss_dssp -TTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC-
T ss_pred -ccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhhh
Confidence 123456789999999999999999999999999999876543
No 91
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=2.8e-39 Score=344.38 Aligned_cols=252 Identities=20% Similarity=0.327 Sum_probs=194.1
Q ss_pred hhhhCcCCCCceeEEEEEEecCCc----EEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCc-
Q 004979 429 SNIIGSFSDGTVGTVYKGTLSSGV----EIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPF- 503 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~~~~~----~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~- 503 (721)
+++++.+|+|+||+||+|+..... .||||++...... ....+.+.+|++++++++||||+++++++...+..
T Consensus 25 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 101 (323)
T 3qup_A 25 FTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIA---SSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKG 101 (323)
T ss_dssp CEEEEEEEEETTEEEEEEEC-------CEEEEEEC---------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC----
T ss_pred eEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccC---HHHHHHHHHHHHHHHHCCCCceehhhceeecccccc
Confidence 367788999999999999865432 7899988643221 23356899999999999999999999999875421
Q ss_pred ---eEEEEEecCCCCChhhhhhhcc----CCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEe
Q 004979 504 ---TRMMVFEYSPNGSLFEHLHIQE----AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKIS 576 (721)
Q Consensus 504 ---~~~lV~Ey~~~GsL~~~l~~~~----~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~ 576 (721)
..++||||+++|+|.+++.... ...+++..+..|+.|++.||+|||+.+ |+||||||+|||+++++.+||+
T Consensus 102 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~--ivH~Dikp~NIli~~~~~~kl~ 179 (323)
T 3qup_A 102 RLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRN--FIHRDLAARNCMLAEDMTVCVA 179 (323)
T ss_dssp ---CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEECTTSCEEEC
T ss_pred CCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCC--cccCCCCcceEEEcCCCCEEEe
Confidence 2389999999999999986432 225899999999999999999999998 9999999999999999999999
Q ss_pred ccCCCCCCCC-----------CCccccchhhcccCCCCCCccHHHHHHHHHHHHh-CCCcccCCCCCHHHHHHHHhhcCC
Q 004979 577 DFSFWNNTTA-----------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQ 644 (721)
Q Consensus 577 DFGla~~~~~-----------~~~~~~apE~~~~~~~s~ksDVwSfGvvL~Ellt-G~~P~~~~~~~~~~~~~~~~~~~~ 644 (721)
|||+++.... ++..|+|||.+.+..++.++|||||||++|||+| |+.||.... ..+.......+..
T Consensus 180 Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~--~~~~~~~~~~~~~ 257 (323)
T 3qup_A 180 DFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIE--NAEIYNYLIGGNR 257 (323)
T ss_dssp CCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC--GGGHHHHHHTTCC
T ss_pred eccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccC--hHHHHHHHhcCCC
Confidence 9999864321 2336899999999999999999999999999999 999996433 2222233322211
Q ss_pred CCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcC
Q 004979 645 PLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAME 697 (721)
Q Consensus 645 ~~~~~~d~~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 697 (721)
...+..++.++.+++.+||+.||++||++.|+++.|+++....
T Consensus 258 ----------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~ 300 (323)
T 3qup_A 258 ----------LKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHL 300 (323)
T ss_dssp ----------CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred ----------CCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 1112344567899999999999999999999999999987643
No 92
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.5e-38 Score=334.93 Aligned_cols=244 Identities=21% Similarity=0.254 Sum_probs=189.7
Q ss_pred hhhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccch---------------------hhHHHHHHHHHHHHHhcCC
Q 004979 429 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADW---------------------SKNLESQFRKKIDTLSKVN 486 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~---------------------~~~~~~~f~~Ei~~l~~l~ 486 (721)
+++.+.+|+|+||+||+|+.. +++.||||++........ .....+.+.+|++++++++
T Consensus 15 y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 94 (298)
T 2zv2_A 15 YTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKLD 94 (298)
T ss_dssp EEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHTCC
T ss_pred eEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHhCC
Confidence 367788999999999999864 678899999865432110 0112356899999999999
Q ss_pred CCccceEeEEEecCCCceEEEEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeE
Q 004979 487 HKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIY 566 (721)
Q Consensus 487 H~nIv~l~g~~~~~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NIL 566 (721)
||||+++++++.+......++||||+++|+|.+++. ...+++..+..++.||+.||+|||+.+ |+||||||+|||
T Consensus 95 h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~Dlkp~Nil 169 (298)
T 2zv2_A 95 HPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT---LKPLSEDQARFYFQDLIKGIEYLHYQK--IIHRDIKPSNLL 169 (298)
T ss_dssp CTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC---SSCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEE
T ss_pred CCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHHHEE
Confidence 999999999998744346899999999999988753 356999999999999999999999998 999999999999
Q ss_pred eCCCCcEEEeccCCCCCC---------CCCCccccchhhcccCC---CCCCccHHHHHHHHHHHHhCCCcccCCCCCHHH
Q 004979 567 LTEDYAAKISDFSFWNNT---------TAAKTGSAAMELLETSA---VDLESNVYSFGTILFEMITGRISYSIENGSLEN 634 (721)
Q Consensus 567 l~~~~~~kL~DFGla~~~---------~~~~~~~~apE~~~~~~---~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~ 634 (721)
++.++.+||+|||+++.. ..++..|+|||.+.... ++.++|||||||++|||+||+.||... ....
T Consensus 170 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~--~~~~ 247 (298)
T 2zv2_A 170 VGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDE--RIMC 247 (298)
T ss_dssp ECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCS--SHHH
T ss_pred ECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCc--cHHH
Confidence 999999999999987532 23456799999987655 378899999999999999999999643 3333
Q ss_pred HHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004979 635 WASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 688 (721)
Q Consensus 635 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 688 (721)
+............. ....+.++.+++.+||+.||++||++.|+++
T Consensus 248 ~~~~~~~~~~~~~~---------~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 248 LHSKIKSQALEFPD---------QPDIAEDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp HHHHHHHCCCCCCS---------SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred HHHHHhcccCCCCC---------ccccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 33333322211110 1234467899999999999999999999864
No 93
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=1.6e-39 Score=345.83 Aligned_cols=254 Identities=23% Similarity=0.321 Sum_probs=203.5
Q ss_pred hhhhCcCCCCceeEEEEEEec-----CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCc
Q 004979 429 SNIIGSFSDGTVGTVYKGTLS-----SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPF 503 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~~-----~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~ 503 (721)
+++++.+|+|+||+||++.+. +++.||||++.... .....+.+.+|++++++++||||+++++++.+.+..
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 108 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADA----GPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAA 108 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTC----CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTT
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEecccc----ChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCc
Confidence 377889999999999998753 67889999886432 233456799999999999999999999999876444
Q ss_pred eEEEEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCC
Q 004979 504 TRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN 583 (721)
Q Consensus 504 ~~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~ 583 (721)
..++||||+++|+|.+++.. ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 109 ~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~i~~~l~~~l~~LH~~~--ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~ 183 (318)
T 3lxp_A 109 SLQLVMEYVPLGSLRDYLPR---HSIGLAQLLLFAQQICEGMAYLHAQH--YIHRDLAARNVLLDNDRLVKIGDFGLAKA 183 (318)
T ss_dssp EEEEEECCCTTCBHHHHGGG---SCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECTTCCEEECCGGGCEE
T ss_pred eEEEEEecccCCcHHHHHhh---CCCCHHHHHHHHHHHHHHHHHHHhCC--ccCCCCchheEEEcCCCCEEECCcccccc
Confidence 67999999999999999853 34899999999999999999999998 99999999999999999999999998754
Q ss_pred CCC------------CCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHH------------HHHHH
Q 004979 584 TTA------------AKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLEN------------WASEY 639 (721)
Q Consensus 584 ~~~------------~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~------------~~~~~ 639 (721)
... ++..|+|||.+.+..++.++|||||||++|||+||+.||......... .....
T Consensus 184 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (318)
T 3lxp_A 184 VPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTEL 263 (318)
T ss_dssp CCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHH
T ss_pred ccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHH
Confidence 322 233589999999888999999999999999999999998632111000 01111
Q ss_pred hhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCCCC
Q 004979 640 LKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPDG 700 (721)
Q Consensus 640 ~~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~ 700 (721)
.... .....+..++.++.+++.+||+.||++||++.|+++.|+++.+.....
T Consensus 264 ~~~~---------~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~~~ 315 (318)
T 3lxp_A 264 LERG---------ERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQGQ 315 (318)
T ss_dssp HHTT---------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHC-
T ss_pred Hhcc---------cCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhccC
Confidence 1110 011123345678999999999999999999999999999988765543
No 94
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.1e-39 Score=358.78 Aligned_cols=246 Identities=19% Similarity=0.267 Sum_probs=194.8
Q ss_pred hhhhhhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCce
Q 004979 426 EDFSNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFT 504 (721)
Q Consensus 426 ~~~~~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~ 504 (721)
++| ++++.||+|+||+||+|+.. +++.||+|++....... ....+.+.+|++++.+++|||||++++++.+.+ .
T Consensus 61 ~~f-~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~--~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~--~ 135 (412)
T 2vd5_A 61 DDF-EILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLK--RGEVSCFREERDVLVNGDRRWITQLHFAFQDEN--Y 135 (412)
T ss_dssp GGE-EEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHH--HGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSS--E
T ss_pred hhE-EEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhh--HHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCC--E
Confidence 344 67888999999999999975 68999999986432111 112345889999999999999999999999877 7
Q ss_pred EEEEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCC
Q 004979 505 RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT 584 (721)
Q Consensus 505 ~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~ 584 (721)
.|+||||+++|+|.+++... ...+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++..
T Consensus 136 ~~lVmE~~~gg~L~~~l~~~-~~~l~~~~~~~~~~qi~~aL~~LH~~g--iiHrDLKp~NILld~~g~vkL~DFGla~~~ 212 (412)
T 2vd5_A 136 LYLVMEYYVGGDLLTLLSKF-GERIPAEMARFYLAEIVMAIDSVHRLG--YVHRDIKPDNILLDRCGHIRLADFGSCLKL 212 (412)
T ss_dssp EEEEECCCCSCBHHHHHHHH-SSCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEEEcCCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC--eeecccCHHHeeecCCCCEEEeechhheec
Confidence 89999999999999999643 346999999999999999999999998 999999999999999999999999997532
Q ss_pred ----------CCCCccccchhhcc-------cCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCc
Q 004979 585 ----------TAAKTGSAAMELLE-------TSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLK 647 (721)
Q Consensus 585 ----------~~~~~~~~apE~~~-------~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~ 647 (721)
..++..|+|||.+. ...|+.++|||||||++|||+||+.||... +..+....+.......
T Consensus 213 ~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~--~~~~~~~~i~~~~~~~- 289 (412)
T 2vd5_A 213 RADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYAD--STAETYGKIVHYKEHL- 289 (412)
T ss_dssp CTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCS--SHHHHHHHHHTHHHHC-
T ss_pred cCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCC--CHHHHHHHHHhcccCc-
Confidence 24567899999986 467899999999999999999999999643 3333333333211000
Q ss_pred cccCCccccccHHHHHHHHHHHHHcccCCCCCC---CCHHHHHH
Q 004979 648 DIVDPTLKSFQENVLEELLVVIKNCVHPDPKQR---PSMRGIAA 688 (721)
Q Consensus 648 ~~~d~~l~~~~~~~~~~l~~li~~Cl~~dP~~R---Ps~~evl~ 688 (721)
..+......+.++.+||.+||. +|++| |+++|+++
T Consensus 290 -----~~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~ 327 (412)
T 2vd5_A 290 -----SLPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRT 327 (412)
T ss_dssp -----CCC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred -----CCCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence 0011123355789999999999 99998 58988865
No 95
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=2.7e-38 Score=334.86 Aligned_cols=251 Identities=22% Similarity=0.331 Sum_probs=202.4
Q ss_pred hhhhCcCCCCceeEEEEEEe------cCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcC-CCCccceEeEEEecCC
Q 004979 429 SNIIGSFSDGTVGTVYKGTL------SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDE 501 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~------~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l-~H~nIv~l~g~~~~~~ 501 (721)
+++.+.+|+|+||+||+|+. .++..||||++..... ....+.+.+|+++++++ +||||+++++++...+
T Consensus 25 y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~ 100 (313)
T 1t46_A 25 LSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAH----LTEREALMSELKVLSYLGNHMNIVNLLGACTIGG 100 (313)
T ss_dssp EEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCC----HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred hhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchh----HHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCC
Confidence 36778899999999999985 3467899998864321 23356799999999999 9999999999998877
Q ss_pred CceEEEEEecCCCCChhhhhhhccC----------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCe
Q 004979 502 PFTRMMVFEYSPNGSLFEHLHIQEA----------------EHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSI 565 (721)
Q Consensus 502 ~~~~~lV~Ey~~~GsL~~~l~~~~~----------------~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NI 565 (721)
..++||||+++|+|.+++..... ..+++..+..++.|++.||+|||+.+ |+||||||+||
T Consensus 101 --~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~Ni 176 (313)
T 1t46_A 101 --PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN--CIHRDLAARNI 176 (313)
T ss_dssp --SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGE
T ss_pred --CcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCccceE
Confidence 56999999999999999975432 24899999999999999999999998 99999999999
Q ss_pred EeCCCCcEEEeccCCCCCCCCC-----------CccccchhhcccCCCCCCccHHHHHHHHHHHHh-CCCcccCCCCCHH
Q 004979 566 YLTEDYAAKISDFSFWNNTTAA-----------KTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLE 633 (721)
Q Consensus 566 Ll~~~~~~kL~DFGla~~~~~~-----------~~~~~apE~~~~~~~s~ksDVwSfGvvL~Ellt-G~~P~~~~~~~~~ 633 (721)
|++.++.+||+|||+++..... +..|+|||.+.+..++.++|||||||++|||+| |+.||.......
T Consensus 177 l~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~- 255 (313)
T 1t46_A 177 LLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS- 255 (313)
T ss_dssp EEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSH-
T ss_pred EEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchh-
Confidence 9999999999999988644321 235999999998999999999999999999999 999996443321
Q ss_pred HHHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCC
Q 004979 634 NWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEP 698 (721)
Q Consensus 634 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 698 (721)
............ ..+...+.++.+++.+||+.||++||++.|+++.|+++.....
T Consensus 256 -~~~~~~~~~~~~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 310 (313)
T 1t46_A 256 -KFYKMIKEGFRM---------LSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISEST 310 (313)
T ss_dssp -HHHHHHHHTCCC---------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTC
T ss_pred -HHHHHhccCCCC---------CCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHhh
Confidence 122222211110 0112345678999999999999999999999999999876543
No 96
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=9.2e-39 Score=331.36 Aligned_cols=246 Identities=24% Similarity=0.388 Sum_probs=191.4
Q ss_pred hhhCcCCCCceeEEEEEEecCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEEEEE
Q 004979 430 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 509 (721)
Q Consensus 430 ~ii~~lg~G~~g~Vyk~~~~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~lV~ 509 (721)
++.+.+|+|+||+||+|+.. +..+|||++........ ....+.+.+|++++++++||||+++++++.+.+ ..++||
T Consensus 10 ~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~ 85 (271)
T 3dtc_A 10 TLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDI-SQTIENVRQEAKLFAMLKHPNIIALRGVCLKEP--NLCLVM 85 (271)
T ss_dssp EEEEEEEEETTEEEEEEEET-TEEEEEEEC-----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC----CEEEE
T ss_pred eeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccH-HHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCC--ceEEEE
Confidence 56778899999999999975 78899998865432221 222467899999999999999999999998876 569999
Q ss_pred ecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCC-CeEeeCCCCCCeEeCC--------CCcEEEeccCC
Q 004979 510 EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTP-PIAHRNLQSSSIYLTE--------DYAAKISDFSF 580 (721)
Q Consensus 510 Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~-~IvHrDLKp~NILl~~--------~~~~kL~DFGl 580 (721)
||+++|+|.+++. ...+++..+..++.|++.||+|||+.+. +|+||||||+|||++. ++.+||+|||+
T Consensus 86 e~~~~~~L~~~~~---~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~ 162 (271)
T 3dtc_A 86 EFARGGPLNRVLS---GKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGL 162 (271)
T ss_dssp ECCTTEEHHHHHT---SSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC
T ss_pred EcCCCCCHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCc
Confidence 9999999999984 3468999999999999999999999773 4999999999999986 77899999999
Q ss_pred CCCC-------CCCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCccccCCc
Q 004979 581 WNNT-------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPT 653 (721)
Q Consensus 581 a~~~-------~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 653 (721)
++.. ..++..|+|||.+.+..++.++||||||+++|||+||+.||.... ..............
T Consensus 163 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~--~~~~~~~~~~~~~~-------- 232 (271)
T 3dtc_A 163 AREWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGID--GLAVAYGVAMNKLA-------- 232 (271)
T ss_dssp -------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSC--HHHHHHHHHTSCCC--------
T ss_pred ccccccccccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--HHHHHHhhhcCCCC--------
Confidence 8632 234567999999999999999999999999999999999996432 22222222222111
Q ss_pred cccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHh
Q 004979 654 LKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 693 (721)
Q Consensus 654 l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~i 693 (721)
...+..++.++.+++.+||+.||++||++.|+++.|+++
T Consensus 233 -~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 233 -LPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp -CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred -CCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 112234457789999999999999999999999999864
No 97
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=1.2e-38 Score=334.37 Aligned_cols=249 Identities=26% Similarity=0.481 Sum_probs=193.8
Q ss_pred hhhhCcCCCCceeEEEEEEecCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEEEE
Q 004979 429 SNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 508 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~lV 508 (721)
+++.+.+|+|+||+||+|+... .+|+|++..... .....+.|.+|++++++++||||+++++++... ..++|
T Consensus 26 y~~~~~lG~G~~g~Vy~~~~~~--~vavK~~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---~~~lv 97 (289)
T 3og7_A 26 ITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAP---TPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAP---QLAIV 97 (289)
T ss_dssp CEEEEEEEECSSEEEEEEESSS--EEEEEEESCSSC---CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS---SCEEE
T ss_pred eeeeeEecCCCCeEEEEEEEcC--ceEEEEEeccCC---CHHHHHHHHHHHHHHHhCCCCcEEEEEeeccCC---ccEEE
Confidence 3677889999999999998653 589998865432 233456799999999999999999999977543 35899
Q ss_pred EecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCCC---
Q 004979 509 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT--- 585 (721)
Q Consensus 509 ~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~~--- 585 (721)
|||+++|+|.+++.. ....+++..+..|+.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 98 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~L~~lH~~~--i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 174 (289)
T 3og7_A 98 TQWCEGSSLYHHLHA-SETKFEMKKLIDIARQTARGMDYLHAKS--IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWS 174 (289)
T ss_dssp EECCCEEEHHHHHTT-C---CCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEEETTTEEEECCCC---------
T ss_pred EEecCCCcHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHhCC--cccccCccceEEECCCCCEEEccceecccccccc
Confidence 999999999999853 3456999999999999999999999998 9999999999999999999999999875322
Q ss_pred --------CCCccccchhhcc---cCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcc
Q 004979 586 --------AAKTGSAAMELLE---TSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTL 654 (721)
Q Consensus 586 --------~~~~~~~apE~~~---~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 654 (721)
.++..|+|||.+. ...++.++|||||||++|||+||+.||.... ...........+.. .+..
T Consensus 175 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~-~~~~~~~~~~~~~~------~~~~ 247 (289)
T 3og7_A 175 GSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNIN-NRDQIIEMVGRGSL------SPDL 247 (289)
T ss_dssp ---------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCC-CHHHHHHHHHHTSC------CCCT
T ss_pred ccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccc-hHHHHHHHhccccc------Ccch
Confidence 2456799999986 6678889999999999999999999996432 22222222222211 1112
Q ss_pred ccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhh
Q 004979 655 KSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITA 695 (721)
Q Consensus 655 ~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~i~~ 695 (721)
......++.++.+++.+||+.||++||++.|+++.|+++.+
T Consensus 248 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 248 SKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp TSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred hhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 22334556789999999999999999999999999998764
No 98
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=1.5e-38 Score=340.77 Aligned_cols=251 Identities=23% Similarity=0.403 Sum_probs=202.8
Q ss_pred hhhhCcCCCCceeEEEEEEec--------CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcC-CCCccceEeEEEec
Q 004979 429 SNIIGSFSDGTVGTVYKGTLS--------SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEE 499 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~~--------~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l-~H~nIv~l~g~~~~ 499 (721)
+.+.+.+|+|+||+||+|+.. ++..||+|++.... .....+.+.+|+++++++ +||||+++++++..
T Consensus 37 y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 112 (334)
T 2pvf_A 37 LTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA----TEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 112 (334)
T ss_dssp EEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred eEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCC----cHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEcc
Confidence 367788999999999999863 46789999886432 233456799999999999 99999999999988
Q ss_pred CCCceEEEEEecCCCCChhhhhhhccC--------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCe
Q 004979 500 DEPFTRMMVFEYSPNGSLFEHLHIQEA--------------EHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSI 565 (721)
Q Consensus 500 ~~~~~~~lV~Ey~~~GsL~~~l~~~~~--------------~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NI 565 (721)
.+ ..++||||+++|+|.+++..... ..+++..+..++.||+.||+|||+.+ |+||||||+||
T Consensus 113 ~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dlkp~NI 188 (334)
T 2pvf_A 113 DG--PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNV 188 (334)
T ss_dssp SS--CCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGE
T ss_pred CC--ceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC--eeCCCCccceE
Confidence 76 56999999999999999974321 34899999999999999999999998 99999999999
Q ss_pred EeCCCCcEEEeccCCCCCCC-----------CCCccccchhhcccCCCCCCccHHHHHHHHHHHHh-CCCcccCCCCCHH
Q 004979 566 YLTEDYAAKISDFSFWNNTT-----------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLE 633 (721)
Q Consensus 566 Ll~~~~~~kL~DFGla~~~~-----------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~Ellt-G~~P~~~~~~~~~ 633 (721)
|++.++.+||+|||+++... .++..|+|||.+.+..++.++|||||||++|||+| |+.||... ...
T Consensus 189 ll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~--~~~ 266 (334)
T 2pvf_A 189 LVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI--PVE 266 (334)
T ss_dssp EECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC--CHH
T ss_pred EEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcC--CHH
Confidence 99999999999999875322 12345999999988889999999999999999999 99999633 333
Q ss_pred HHHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCCC
Q 004979 634 NWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPD 699 (721)
Q Consensus 634 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~ 699 (721)
+.......+... ..+..++.++.+++.+||+.||++||++.|+++.|+++......
T Consensus 267 ~~~~~~~~~~~~----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~~~ 322 (334)
T 2pvf_A 267 ELFKLLKEGHRM----------DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTN 322 (334)
T ss_dssp HHHHHHHHTCCC----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHhcCCCC----------CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhcccc
Confidence 443333332111 11233456789999999999999999999999999999876543
No 99
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.6e-39 Score=349.35 Aligned_cols=264 Identities=14% Similarity=0.166 Sum_probs=204.6
Q ss_pred hhhhCcCCCCceeEEEEEEecC---------CcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccce-------
Q 004979 429 SNIIGSFSDGTVGTVYKGTLSS---------GVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVN------- 492 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~~~---------~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~------- 492 (721)
+++.+.+|+|+||+||+|+... +..||+|++... +.+.+|++++++++|||||+
T Consensus 44 y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~----------~~~~~E~~~l~~l~h~niv~~~~~~~~ 113 (352)
T 2jii_A 44 WKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD----------GRLFNEQNFFQRAAKPLQVNKWKKLYS 113 (352)
T ss_dssp EEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT----------STHHHHHHHHHHHCCHHHHHHHHHHTT
T ss_pred EEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc----------chHHHHHHHHHHhcccchhhhhhhhcc
Confidence 4677889999999999999764 788999987632 35789999999999999998
Q ss_pred --------EeEEEecCCCceEEEEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCC
Q 004979 493 --------LIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSS 564 (721)
Q Consensus 493 --------l~g~~~~~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~N 564 (721)
+++++...+. ..++||||+ +|+|.+++.......+++..+..|+.||+.||+|||+.+ |+||||||+|
T Consensus 114 ~~~~~i~~~~~~~~~~~~-~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~--ivH~Dikp~N 189 (352)
T 2jii_A 114 TPLLAIPTCMGFGVHQDK-YRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENE--YVHGNVTAEN 189 (352)
T ss_dssp CTTCSCCCCCEEEEETTT-EEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTT--CBCSCCCGGG
T ss_pred CCccCccchhhccccCCc-EEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCC--ccCCCCCHHH
Confidence 6777765332 679999999 999999997554567999999999999999999999998 9999999999
Q ss_pred eEeCCCC--cEEEeccCCCCCCC----------------CCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCccc
Q 004979 565 IYLTEDY--AAKISDFSFWNNTT----------------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYS 626 (721)
Q Consensus 565 ILl~~~~--~~kL~DFGla~~~~----------------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~ 626 (721)
||++.++ .+||+|||+++... .++..|+|||.+.+..++.++|||||||++|||+||+.||.
T Consensus 190 Il~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~ 269 (352)
T 2jii_A 190 IFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWT 269 (352)
T ss_dssp EEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTG
T ss_pred EEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcc
Confidence 9999998 99999999985321 34557899999999999999999999999999999999997
Q ss_pred CCCCCHHHHHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCC
Q 004979 627 IENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPDGATPKLS 706 (721)
Q Consensus 627 ~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~p~~~ 706 (721)
........................+... .....+.++.+++.+||+.||++||++.||++.|+++.+.... ....
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~---~~~~ 344 (352)
T 2jii_A 270 NCLPNTEDIMKQKQKFVDKPGPFVGPCG--HWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLRV---SPYD 344 (352)
T ss_dssp GGTTCHHHHHHHHHHHHHSCCCEECTTS--CEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTC---CTTS
T ss_pred cCCcCHHHHHHHHHhccCChhhhhhhcc--ccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcCC---CcCc
Confidence 5443332222111100001111111110 0112357799999999999999999999999999998877643 2344
Q ss_pred hhHHH
Q 004979 707 PLWWA 711 (721)
Q Consensus 707 ~~~~~ 711 (721)
+++|+
T Consensus 345 ~~dw~ 349 (352)
T 2jii_A 345 PIGLP 349 (352)
T ss_dssp CCCCC
T ss_pred cccCc
Confidence 56664
No 100
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=9.3e-39 Score=336.75 Aligned_cols=251 Identities=24% Similarity=0.329 Sum_probs=197.1
Q ss_pred hhhhhCcCCCCceeEEEEEEe-----cCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCC
Q 004979 428 FSNIIGSFSDGTVGTVYKGTL-----SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEP 502 (721)
Q Consensus 428 ~~~ii~~lg~G~~g~Vyk~~~-----~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~ 502 (721)
++++++.+|+|+||.||+|++ .++..||+|++..... ....+.+.+|++++++++||||+++++++...+.
T Consensus 22 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~ 97 (302)
T 4e5w_A 22 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESG----GNHIADLKKEIEILRNLYHENIVKYKGICTEDGG 97 (302)
T ss_dssp GEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC---------CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---
T ss_pred hhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEeccccc----chhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCC
Confidence 357788999999999999984 3678899998864432 1224678999999999999999999999987644
Q ss_pred ceEEEEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCC
Q 004979 503 FTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWN 582 (721)
Q Consensus 503 ~~~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~ 582 (721)
...++||||+++|+|.+++.. ....+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++
T Consensus 98 ~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dikp~Nil~~~~~~~kl~Dfg~~~ 174 (302)
T 4e5w_A 98 NGIKLIMEFLPSGSLKEYLPK-NKNKINLKQQLKYAVQICKGMDYLGSRQ--YVHRDLAARNVLVESEHQVKIGDFGLTK 174 (302)
T ss_dssp CCEEEEEECCTTCBHHHHHHH-HTTTCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEEEETTEEEECCCTTCE
T ss_pred ceEEEEEEeCCCCcHHHHHHh-ccccCCHHHHHHHHHHHHHHHHHhhcCC--cccCCCchheEEEcCCCCEEECcccccc
Confidence 467999999999999999854 3356999999999999999999999998 9999999999999999999999999875
Q ss_pred CCC------------CCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCC------------CCHHHHHHH
Q 004979 583 NTT------------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIEN------------GSLENWASE 638 (721)
Q Consensus 583 ~~~------------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~------------~~~~~~~~~ 638 (721)
... .++..|+|||.+.+..++.++|||||||++|||+||+.|+.... .........
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (302)
T 4e5w_A 175 AIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVN 254 (302)
T ss_dssp ECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHH
T ss_pred cccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHH
Confidence 322 22335899999988899999999999999999999998864210 000111111
Q ss_pred HhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhh
Q 004979 639 YLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEIT 694 (721)
Q Consensus 639 ~~~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~i~ 694 (721)
...... ....+..+++++.+++.+||+.||++|||+.|+++.|+++.
T Consensus 255 ~~~~~~---------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 255 TLKEGK---------RLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp HHHTTC---------CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHhccC---------CCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 111111 11123345678999999999999999999999999999875
No 101
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=2.6e-38 Score=344.16 Aligned_cols=238 Identities=19% Similarity=0.279 Sum_probs=191.1
Q ss_pred hCcCCCCceeEEEEEEe-cCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEEEEEe
Q 004979 432 IGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFE 510 (721)
Q Consensus 432 i~~lg~G~~g~Vyk~~~-~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~lV~E 510 (721)
.+.||+|+||.||+|+. .++..||+|++..... ...+.+.+|+++|++++|||||++++++.+.+ ..++|||
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~--~~~lv~E 166 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGM-----KDKEEVKNEISVMNQLDHANLIQLYDAFESKN--DIVLVME 166 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCSH-----HHHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEEEEE
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEccccc-----ccHHHHHHHHHHHHhCCCCCCCeEEEEEEECC--EEEEEEe
Confidence 45689999999999986 4688999998875432 23467999999999999999999999998876 6799999
Q ss_pred cCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEe--CCCCcEEEeccCCCCCCC---
Q 004979 511 YSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYL--TEDYAAKISDFSFWNNTT--- 585 (721)
Q Consensus 511 y~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl--~~~~~~kL~DFGla~~~~--- 585 (721)
|+++|+|.+++.. ....+++..+..++.||+.||+|||+.+ |+||||||+|||+ ++++.+||+|||+++...
T Consensus 167 ~~~~~~L~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~ 243 (373)
T 2x4f_A 167 YVDGGELFDRIID-ESYNLTELDTILFMKQICEGIRHMHQMY--ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE 243 (373)
T ss_dssp CCTTCEEHHHHHH-TGGGCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC
T ss_pred CCCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC--cccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc
Confidence 9999999998864 2346899999999999999999999998 9999999999999 677899999999986322
Q ss_pred -----CCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHH
Q 004979 586 -----AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQEN 660 (721)
Q Consensus 586 -----~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 660 (721)
.++..|+|||.+....++.++|||||||++|||+||+.||... +..+....+......... .....
T Consensus 244 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~--~~~~~~~~i~~~~~~~~~-------~~~~~ 314 (373)
T 2x4f_A 244 KLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGD--NDAETLNNILACRWDLED-------EEFQD 314 (373)
T ss_dssp BCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCS--SHHHHHHHHHHTCCCSCS-------GGGTT
T ss_pred ccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCC--CHHHHHHHHHhccCCCCh-------hhhcc
Confidence 2566799999999889999999999999999999999999643 334444444443222111 11123
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004979 661 VLEELLVVIKNCVHPDPKQRPSMRGIAA 688 (721)
Q Consensus 661 ~~~~l~~li~~Cl~~dP~~RPs~~evl~ 688 (721)
.+.++.+|+.+||+.||++||++.|+++
T Consensus 315 ~~~~~~~li~~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 315 ISEEAKEFISKLLIKEKSWRISASEALK 342 (373)
T ss_dssp SCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred CCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 4578899999999999999999999987
No 102
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=4.5e-38 Score=335.12 Aligned_cols=260 Identities=18% Similarity=0.257 Sum_probs=208.6
Q ss_pred hhhhhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccch-hhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCce
Q 004979 427 DFSNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADW-SKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFT 504 (721)
Q Consensus 427 ~~~~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~-~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~ 504 (721)
+.+++.+.+|+|+||.||+|+.. ++..+|+|++........ .....+.+.+|++++++++||||+++++++.+.+ .
T Consensus 12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~ 89 (321)
T 2a2a_A 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRT--D 89 (321)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--E
T ss_pred ccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCC--E
Confidence 44578889999999999999965 688999999875432211 1112467999999999999999999999998876 6
Q ss_pred EEEEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCC----cEEEeccCC
Q 004979 505 RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDY----AAKISDFSF 580 (721)
Q Consensus 505 ~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~----~~kL~DFGl 580 (721)
.++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++ .+||+|||+
T Consensus 90 ~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~lH~~~--ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~ 165 (321)
T 2a2a_A 90 VVLILELVSGGELFDFLAQ--KESLSEEEATSFIKQILDGVNYLHTKK--IAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165 (321)
T ss_dssp EEEEECCCCSCBHHHHHHT--CSCEEHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEESCTTSSSCCEEECCCTT
T ss_pred EEEEEEcCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCChHHEEEecCCCCcCCEEEccCcc
Confidence 7999999999999999863 456899999999999999999999998 99999999999999887 799999998
Q ss_pred CCCCC--------CCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCccccCC
Q 004979 581 WNNTT--------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDP 652 (721)
Q Consensus 581 a~~~~--------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 652 (721)
++... .++..|+|||.+.+..++.++|||||||++|||+||+.||... ...+....+........
T Consensus 166 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~--~~~~~~~~i~~~~~~~~----- 238 (321)
T 2a2a_A 166 AHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD--TKQETLANITSVSYDFD----- 238 (321)
T ss_dssp CEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCS--SHHHHHHHHHTTCCCCC-----
T ss_pred ceecCccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCC--CHHHHHHHHHhcccccC-----
Confidence 75322 2456799999999999999999999999999999999999643 33344433333221111
Q ss_pred ccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCChhHHHHHH
Q 004979 653 TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPDGATPKLSPLWWAELE 714 (721)
Q Consensus 653 ~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~p~~~~~~~~~l~ 714 (721)
.......+.++.+++.+||+.||++|||+.|+++ +|.+.+..|....
T Consensus 239 --~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~-------------hp~~~~~~~~~~~ 285 (321)
T 2a2a_A 239 --EEFFSHTSELAKDFIRKLLVKETRKRLTIQEALR-------------HPWITPVDNQQAM 285 (321)
T ss_dssp --HHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHH-------------STTTSCSSHHHHH
T ss_pred --hhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhc-------------CccccCCCccccc
Confidence 0111234567899999999999999999999986 5677777776653
No 103
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=1.4e-38 Score=336.67 Aligned_cols=255 Identities=20% Similarity=0.221 Sum_probs=194.6
Q ss_pred hhhhCcCCCCceeEEEEEEe-cCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcC---CCCccceEeEEEecCCC--
Q 004979 429 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV---NHKNFVNLIGYCEEDEP-- 502 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~-~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l---~H~nIv~l~g~~~~~~~-- 502 (721)
+++++.+|+|+||+||+|+. .+++.||+|++...............+.+|+++++++ +||||+++++++.....
T Consensus 11 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~~~ 90 (308)
T 3g33_A 11 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDR 90 (308)
T ss_dssp CEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCSSS
T ss_pred eEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCCCC
Confidence 47888999999999999995 5788999999875432221111223566777777666 59999999999976442
Q ss_pred -ceEEEEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCC
Q 004979 503 -FTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW 581 (721)
Q Consensus 503 -~~~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla 581 (721)
...++||||+. |+|.+++.......+++..+..|+.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++
T Consensus 91 ~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~--ivH~Dlkp~Nil~~~~~~~kl~Dfg~a 167 (308)
T 3g33_A 91 EIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANC--IVHRDLKPENILVTSGGTVKLADFGLA 167 (308)
T ss_dssp EEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCTTTEEECTTSCEEECSCSCT
T ss_pred ceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEEcCCCCEEEeeCccc
Confidence 24689999996 69999997655556999999999999999999999998 999999999999999999999999998
Q ss_pred CCCC--------CCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhc--CCCCccc--
Q 004979 582 NNTT--------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKG--EQPLKDI-- 649 (721)
Q Consensus 582 ~~~~--------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~--~~~~~~~-- 649 (721)
+... .++..|+|||.+.+..++.++|||||||++|||+||+.||.... ..+....+... ..+...+
T Consensus 168 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~--~~~~~~~i~~~~~~~~~~~~~~ 245 (308)
T 3g33_A 168 RIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNS--EADQLGKIFDLIGLPPEDDWPR 245 (308)
T ss_dssp TTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSS--HHHHHHHHHHHHCCCCTTTSCS
T ss_pred cccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHHHhCCCChhhccc
Confidence 6432 23557999999999999999999999999999999999996433 22222222211 0100000
Q ss_pred --------cC----CccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004979 650 --------VD----PTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 688 (721)
Q Consensus 650 --------~d----~~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 688 (721)
.. .......++.++++.+++.+||+.||++|||+.|+++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 246 DVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp SCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence 00 0001112345578899999999999999999999985
No 104
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.3e-39 Score=349.53 Aligned_cols=252 Identities=24% Similarity=0.378 Sum_probs=194.2
Q ss_pred hhhCcCCCCceeEEEEEEec--CC--cEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceE
Q 004979 430 NIIGSFSDGTVGTVYKGTLS--SG--VEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTR 505 (721)
Q Consensus 430 ~ii~~lg~G~~g~Vyk~~~~--~~--~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~ 505 (721)
++.+.+|+|+||+||+|++. ++ ..+|||.+.... .....++|.+|+.++++++|||||+++++|...+. ..
T Consensus 92 ~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~-~~ 166 (373)
T 3c1x_A 92 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT----DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG-SP 166 (373)
T ss_dssp EEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCS----CSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSS-CC
T ss_pred ecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCC----CHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCC-Ce
Confidence 45567899999999999864 22 356777764321 12345789999999999999999999999865432 46
Q ss_pred EEEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCCC
Q 004979 506 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT 585 (721)
Q Consensus 506 ~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~~ 585 (721)
++||||+++|+|.+++.. ....+++..+..++.||+.||+|||+.+ |+||||||+|||+++++.+||+|||+++...
T Consensus 167 ~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~ 243 (373)
T 3c1x_A 167 LVVLPYMKHGDLRNFIRN-ETHNPTVKDLIGFGLQVAKGMKFLASKK--FVHRDLAARNCMLDEKFTVKVADFGLARDMY 243 (373)
T ss_dssp EEEEECCTTCBHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECTTCCEEECCC-------
T ss_pred EEEEECCCCCCHHHHHhh-cccCCCHHHHHHHHHHHHHHHHHHHHCC--EecCccchheEEECCCCCEEEeecccccccc
Confidence 899999999999999963 3456899999999999999999999998 9999999999999999999999999986331
Q ss_pred C-------------CCccccchhhcccCCCCCCccHHHHHHHHHHHHh-CCCcccCCCCCHHHHHHHHhhcCCCCccccC
Q 004979 586 A-------------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVD 651 (721)
Q Consensus 586 ~-------------~~~~~~apE~~~~~~~s~ksDVwSfGvvL~Ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d 651 (721)
. ++..|+|||.+.+..++.++|||||||++|||+| |..||...... +.......+...
T Consensus 244 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~--~~~~~~~~~~~~------ 315 (373)
T 3c1x_A 244 DKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF--DITVYLLQGRRL------ 315 (373)
T ss_dssp --------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSS--CHHHHHHTTCCC------
T ss_pred ccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHH--HHHHHHHcCCCC------
Confidence 1 2235999999999999999999999999999999 67777543321 112222222111
Q ss_pred CccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCCCCC
Q 004979 652 PTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPDGA 701 (721)
Q Consensus 652 ~~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~~ 701 (721)
..+..++.++.+++.+||+.||++||++.|+++.|+++........
T Consensus 316 ----~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~~~~ 361 (373)
T 3c1x_A 316 ----LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEH 361 (373)
T ss_dssp ----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCSCC
T ss_pred ----CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhccccc
Confidence 1123345678999999999999999999999999999987665443
No 105
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=1.2e-38 Score=334.19 Aligned_cols=249 Identities=19% Similarity=0.282 Sum_probs=193.6
Q ss_pred hhhhCcCCCCceeEEEEEEecCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEEEE
Q 004979 429 SNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 508 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~lV 508 (721)
|++++.+|+|+||+||+|+..+++.+|+|++...... ....+.+.+|++++++++||||+++++++.+.+ ..++|
T Consensus 4 y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv 78 (288)
T 1ob3_A 4 YHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKED---EGIPSTTIREISILKELKHSNIVKLYDVIHTKK--RLVLV 78 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGG---GCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSS--CEEEE
T ss_pred chhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccc---cccchhHHHHHHHHHhcCCCCEeeeeeEEccCC--eEEEE
Confidence 3677889999999999999988999999998654322 122356889999999999999999999998876 67999
Q ss_pred EecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCC----
Q 004979 509 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT---- 584 (721)
Q Consensus 509 ~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~---- 584 (721)
|||+++ +|.+++.. ....+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 79 ~e~~~~-~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 154 (288)
T 1ob3_A 79 FEHLDQ-DLKKLLDV-CEGGLESVTAKSFLLQLLNGIAYCHDRR--VLHRDLKPQNLLINREGELKIADFGLARAFGIPV 154 (288)
T ss_dssp EECCSE-EHHHHHHT-STTCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECTTSCEEECCTTHHHHHCC--
T ss_pred EEecCC-CHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEEcCCCCEEEeECccccccCccc
Confidence 999975 99888863 3356899999999999999999999998 999999999999999999999999986421
Q ss_pred -----CCCCccccchhhccc-CCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhh--cCCCCcc--------
Q 004979 585 -----TAAKTGSAAMELLET-SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLK--GEQPLKD-------- 648 (721)
Q Consensus 585 -----~~~~~~~~apE~~~~-~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~--~~~~~~~-------- 648 (721)
..++..|+|||.+.+ ..++.++|||||||++|||+||+.||.... ..+....... +......
T Consensus 155 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (288)
T 1ob3_A 155 RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVS--EADQLMRIFRILGTPNSKNWPNVTELP 232 (288)
T ss_dssp -------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHHHHHCCCCTTTSTTGGGST
T ss_pred cccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHHHHCCCChhhchhhhccc
Confidence 134567999999865 458999999999999999999999996432 2222222221 1000000
Q ss_pred ccCCc--------cccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004979 649 IVDPT--------LKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 688 (721)
Q Consensus 649 ~~d~~--------l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 688 (721)
..++. ........+.++.+++.+||+.||++|||+.|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 233 KYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp TCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 00110 01122345678899999999999999999999875
No 106
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.8e-38 Score=339.80 Aligned_cols=247 Identities=15% Similarity=0.207 Sum_probs=193.9
Q ss_pred hhhhCcCCCCceeEEEEEEe-cCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEEE
Q 004979 429 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 507 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~-~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~l 507 (721)
+++++.+|+|+||+||+|+. .++..+|+|++.............+.+.+|++++++++|||||++++++.+.+ ..++
T Consensus 28 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--~~~l 105 (345)
T 3hko_A 28 YHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQ--YICL 105 (345)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEE
T ss_pred eeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCC--eEEE
Confidence 47888999999999999996 46788999988654322222344578999999999999999999999998876 6799
Q ss_pred EEecCCCCChhhhhhhcc--------------------------------------CCCCCHHHHHHHHHHHHHHHHHHh
Q 004979 508 VFEYSPNGSLFEHLHIQE--------------------------------------AEHLDWAMRLRIAMGMAYCLEHMH 549 (721)
Q Consensus 508 V~Ey~~~GsL~~~l~~~~--------------------------------------~~~l~~~~~~~ia~~ia~gL~yLH 549 (721)
||||+++|+|.+++.... ...+++..+..|+.||+.||+|||
T Consensus 106 v~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH 185 (345)
T 3hko_A 106 VMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLH 185 (345)
T ss_dssp EEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHH
Confidence 999999999999884210 112356677889999999999999
Q ss_pred cCCCCeEeeCCCCCCeEeCCCC--cEEEeccCCCCCC-------------CCCCccccchhhccc--CCCCCCccHHHHH
Q 004979 550 QLTPPIAHRNLQSSSIYLTEDY--AAKISDFSFWNNT-------------TAAKTGSAAMELLET--SAVDLESNVYSFG 612 (721)
Q Consensus 550 ~~~~~IvHrDLKp~NILl~~~~--~~kL~DFGla~~~-------------~~~~~~~~apE~~~~--~~~s~ksDVwSfG 612 (721)
+.+ |+||||||+|||++.++ .+||+|||+++.. ..++..|+|||.+.. ..++.++||||||
T Consensus 186 ~~~--ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG 263 (345)
T 3hko_A 186 NQG--ICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAG 263 (345)
T ss_dssp HTT--EECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHHH
T ss_pred HCC--ccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHHH
Confidence 998 99999999999998776 8999999987532 224567999999865 6789999999999
Q ss_pred HHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004979 613 TILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 688 (721)
Q Consensus 613 vvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 688 (721)
|++|||+||+.||... ...+............. .+ .....+.++.+++.+||+.||++||++.|+++
T Consensus 264 ~il~el~~g~~pf~~~--~~~~~~~~~~~~~~~~~---~~----~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~ 330 (345)
T 3hko_A 264 VLLHLLLMGAVPFPGV--NDADTISQVLNKKLCFE---NP----NYNVLSPLARDLLSNLLNRNVDERFDAMRALQ 330 (345)
T ss_dssp HHHHHHHHSSCSSCCS--SHHHHHHHHHHCCCCTT---SG----GGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHH
T ss_pred HHHHHHHHCCCCCCCC--ChHHHHHHHHhcccccC---Cc----ccccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 9999999999999633 33344444443322111 11 11234567899999999999999999999987
No 107
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=2e-38 Score=359.03 Aligned_cols=237 Identities=19% Similarity=0.237 Sum_probs=195.6
Q ss_pred hhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEEEE
Q 004979 430 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 508 (721)
Q Consensus 430 ~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~lV 508 (721)
++++.||+|+||+||+|+.. +++.||+|++....... ......+.+|++++++++|||||++++++.+.+ ..|+|
T Consensus 188 ~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~--~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~--~l~lV 263 (543)
T 3c4z_A 188 LDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKK--RKGYQGAMVEKKILAKVHSRFIVSLAYAFETKT--DLCLV 263 (543)
T ss_dssp EEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHH--TTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEE
T ss_pred EEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhh--hHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCC--EEEEE
Confidence 55677999999999999975 68999999986543211 122457889999999999999999999998876 67999
Q ss_pred EecCCCCChhhhhhhcc--CCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCC--
Q 004979 509 FEYSPNGSLFEHLHIQE--AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT-- 584 (721)
Q Consensus 509 ~Ey~~~GsL~~~l~~~~--~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~-- 584 (721)
|||+++|+|.+++.... ...+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++..
T Consensus 264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~g--IvHrDLKP~NILl~~~g~vkL~DFGla~~~~~ 341 (543)
T 3c4z_A 264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN--IIYRDLKPENVLLDDDGNVRISDLGLAVELKA 341 (543)
T ss_dssp ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcC--CcccCCChHHEEEeCCCCEEEeecceeeeccC
Confidence 99999999999986433 456999999999999999999999998 999999999999999999999999998532
Q ss_pred -------CCCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCCC--CHHHHHHHHhhcCCCCccccCCccc
Q 004979 585 -------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENG--SLENWASEYLKGEQPLKDIVDPTLK 655 (721)
Q Consensus 585 -------~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~--~~~~~~~~~~~~~~~~~~~~d~~l~ 655 (721)
..++..|+|||.+.+..++.++|||||||++|||+||+.||..... ...+....+......
T Consensus 342 ~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~~~~---------- 411 (543)
T 3c4z_A 342 GQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVT---------- 411 (543)
T ss_dssp TCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHCCCC----------
T ss_pred CCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhcccC----------
Confidence 2456689999999999999999999999999999999999975432 334444444433221
Q ss_pred cccHHHHHHHHHHHHHcccCCCCCCCCH
Q 004979 656 SFQENVLEELLVVIKNCVHPDPKQRPSM 683 (721)
Q Consensus 656 ~~~~~~~~~l~~li~~Cl~~dP~~RPs~ 683 (721)
++...+.++.+++.+||+.||++||++
T Consensus 412 -~p~~~s~~~~~li~~lL~~dP~~R~~~ 438 (543)
T 3c4z_A 412 -YPDKFSPASKDFCEALLQKDPEKRLGF 438 (543)
T ss_dssp -CCTTSCHHHHHHHHHHSCSSGGGSCCC
T ss_pred -CCcccCHHHHHHHHHhccCCHhHCCCC
Confidence 223445788999999999999999976
No 108
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.8e-38 Score=341.33 Aligned_cols=251 Identities=21% Similarity=0.332 Sum_probs=197.3
Q ss_pred hhhCcCCCCceeEEEEEEe------cCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcC-CCCccceEeEEEecCCC
Q 004979 430 NIIGSFSDGTVGTVYKGTL------SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEP 502 (721)
Q Consensus 430 ~ii~~lg~G~~g~Vyk~~~------~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l-~H~nIv~l~g~~~~~~~ 502 (721)
++.+.+|+|+||+||+|+. .++..||||++..... ....+.+.+|++++.++ +||||+++++++...+
T Consensus 48 ~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~- 122 (344)
T 1rjb_A 48 EFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKAD----SSEREALMSELKMMTQLGSHENIVNLLGACTLSG- 122 (344)
T ss_dssp EEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-
T ss_pred eeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccC----HHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCC-
Confidence 6778899999999999986 2456799998864321 22346799999999999 9999999999998876
Q ss_pred ceEEEEEecCCCCChhhhhhhccC---------------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCC
Q 004979 503 FTRMMVFEYSPNGSLFEHLHIQEA---------------------EHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQ 561 (721)
Q Consensus 503 ~~~~lV~Ey~~~GsL~~~l~~~~~---------------------~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLK 561 (721)
..++||||+++|+|.+++..... ..+++..+..++.||+.||+|||+.+ |+|||||
T Consensus 123 -~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dik 199 (344)
T 1rjb_A 123 -PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS--CVHRDLA 199 (344)
T ss_dssp -SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTT--EEETTCS
T ss_pred -ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCC
Confidence 56999999999999999964322 23899999999999999999999988 9999999
Q ss_pred CCCeEeCCCCcEEEeccCCCCCCCC-----------CCccccchhhcccCCCCCCccHHHHHHHHHHHHh-CCCcccCCC
Q 004979 562 SSSIYLTEDYAAKISDFSFWNNTTA-----------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIEN 629 (721)
Q Consensus 562 p~NILl~~~~~~kL~DFGla~~~~~-----------~~~~~~apE~~~~~~~s~ksDVwSfGvvL~Ellt-G~~P~~~~~ 629 (721)
|+|||++.++.+||+|||+++.... ++..|+|||.+.+..++.++|||||||++|||+| |+.||....
T Consensus 200 p~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 279 (344)
T 1rjb_A 200 ARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIP 279 (344)
T ss_dssp GGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred hhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCC
Confidence 9999999999999999999864321 1235999999988999999999999999999998 999997543
Q ss_pred CCHHHHHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCCC
Q 004979 630 GSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPD 699 (721)
Q Consensus 630 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~ 699 (721)
.. ............. ..+..++.++.+++.+||+.||++||++.|+++.|+.+....+.
T Consensus 280 ~~--~~~~~~~~~~~~~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~ 338 (344)
T 1rjb_A 280 VD--ANFYKLIQNGFKM---------DQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADAEE 338 (344)
T ss_dssp CS--HHHHHHHHTTCCC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-----
T ss_pred cH--HHHHHHHhcCCCC---------CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHHHH
Confidence 32 1222222221110 11223457789999999999999999999999999998776554
No 109
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.8e-38 Score=366.95 Aligned_cols=242 Identities=19% Similarity=0.300 Sum_probs=198.9
Q ss_pred cCCCCceeEEEEEEec---CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEEEEEe
Q 004979 434 SFSDGTVGTVYKGTLS---SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFE 510 (721)
Q Consensus 434 ~lg~G~~g~Vyk~~~~---~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~lV~E 510 (721)
.||+|+||+||+|.+. ++..||||+++.... ....+.|.+|+++|++++|||||+++++|... ..++|||
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~----~~~~~~~~~E~~il~~l~hpniv~l~~~~~~~---~~~lv~E 415 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTE----KADTEEMMREAQIMHQLDNPYIVRLIGVCQAE---ALMLVME 415 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCS----STTHHHHHHHHHHHTTCCCTTBCCEEEEEESS---SEEEEEE
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCC----hHHHHHHHHHHHHHHhCCCCCEeeEEEEeccC---CeEEEEE
Confidence 6899999999999864 456799998864321 22346799999999999999999999999763 4699999
Q ss_pred cCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCCCC----
Q 004979 511 YSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA---- 586 (721)
Q Consensus 511 y~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~~~---- 586 (721)
|+++|+|.+++.. ....+++..+..|+.||+.||+|||+.+ |+||||||+|||+++++.+||+|||+++....
T Consensus 416 ~~~~g~L~~~l~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~~--iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~ 492 (613)
T 2ozo_A 416 MAGGGPLHKFLVG-KREEIPVSNVAELLHQVSMGMKYLEEKN--FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSY 492 (613)
T ss_dssp CCTTCBHHHHHTT-CTTTSCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEEEETTEEEECCCSTTTTCC-----
T ss_pred eCCCCcHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC--EEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCce
Confidence 9999999999864 3456999999999999999999999998 99999999999999999999999999875321
Q ss_pred --------CCccccchhhcccCCCCCCccHHHHHHHHHHHHh-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccc
Q 004979 587 --------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSF 657 (721)
Q Consensus 587 --------~~~~~~apE~~~~~~~s~ksDVwSfGvvL~Ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 657 (721)
++..|+|||.+....++.++|||||||++|||+| |+.||.... ..+....+..+.. ...
T Consensus 493 ~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~--~~~~~~~i~~~~~----------~~~ 560 (613)
T 2ozo_A 493 YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMK--GPEVMAFIEQGKR----------MEC 560 (613)
T ss_dssp ---------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC--SHHHHHHHHTTCC----------CCC
T ss_pred eeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCC--HHHHHHHHHcCCC----------CCC
Confidence 1246999999999999999999999999999998 999996433 2333333333211 112
Q ss_pred cHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcC
Q 004979 658 QENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAME 697 (721)
Q Consensus 658 ~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 697 (721)
+..++.++.+||.+||+.||++||++.+|++.|+.+....
T Consensus 561 p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~ 600 (613)
T 2ozo_A 561 PPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSL 600 (613)
T ss_dssp CTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred CCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHh
Confidence 3345678999999999999999999999999999876543
No 110
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=4.1e-38 Score=343.91 Aligned_cols=242 Identities=17% Similarity=0.293 Sum_probs=197.9
Q ss_pred hhhhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEE
Q 004979 428 FSNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRM 506 (721)
Q Consensus 428 ~~~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~ 506 (721)
.+++++.+|+|+||+||+|+.. ++..+|+|++.... ......+.+|+++|++++|||||++++++.+.+ ..+
T Consensus 52 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-----~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~--~~~ 124 (387)
T 1kob_A 52 YYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY-----PLDKYTVKNEISIMNQLHHPKLINLHDAFEDKY--EMV 124 (387)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-----HHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSS--EEE
T ss_pred ceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccc-----hhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCC--EEE
Confidence 3578889999999999999965 67889998876432 122457899999999999999999999998876 679
Q ss_pred EEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCC--CCcEEEeccCCCCCC
Q 004979 507 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTE--DYAAKISDFSFWNNT 584 (721)
Q Consensus 507 lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~--~~~~kL~DFGla~~~ 584 (721)
+||||+++|+|.+++.. ....+++..+..++.||+.||+|||+++ |+||||||+|||++. ++.+||+|||+++..
T Consensus 125 lv~E~~~gg~L~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~g--ivHrDlkp~NIll~~~~~~~vkL~DFG~a~~~ 201 (387)
T 1kob_A 125 LILEFLSGGELFDRIAA-EDYKMSEAEVINYMRQACEGLKHMHEHS--IVHLDIKPENIMCETKKASSVKIIDFGLATKL 201 (387)
T ss_dssp EEEECCCCCBHHHHTTC-TTCCBCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEESSTTCCCEEECCCTTCEEC
T ss_pred EEEEcCCCCcHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHhCC--eeecccchHHeEEecCCCCceEEEecccceec
Confidence 99999999999999863 3346899999999999999999999998 999999999999984 578999999998643
Q ss_pred C--------CCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccc
Q 004979 585 T--------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKS 656 (721)
Q Consensus 585 ~--------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 656 (721)
. .++..|+|||.+.+..++.++|||||||++|||+||+.||... +..+....+......... .
T Consensus 202 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~--~~~~~~~~i~~~~~~~~~-------~ 272 (387)
T 1kob_A 202 NPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGE--DDLETLQNVKRCDWEFDE-------D 272 (387)
T ss_dssp CTTSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCS--SHHHHHHHHHHCCCCCCS-------S
T ss_pred CCCcceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCC--CHHHHHHHHHhCCCCCCc-------c
Confidence 2 3456799999999999999999999999999999999999643 333444444333221111 1
Q ss_pred ccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004979 657 FQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 688 (721)
Q Consensus 657 ~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 688 (721)
.....+.++.+++.+||+.||++|||+.|+++
T Consensus 273 ~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 304 (387)
T 1kob_A 273 AFSSVSPEAKDFIKNLLQKEPRKRLTVHDALE 304 (387)
T ss_dssp TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred ccccCCHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence 11234567899999999999999999999986
No 111
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=5e-39 Score=335.63 Aligned_cols=246 Identities=20% Similarity=0.337 Sum_probs=193.1
Q ss_pred hhhhCcCCCCceeEEEEEEecC----CcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCce
Q 004979 429 SNIIGSFSDGTVGTVYKGTLSS----GVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFT 504 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~~~----~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~ 504 (721)
+++.+.+|+|+||+||+|+... +..|++|+..... .....+.+.+|+.++++++||||+++++++.+. .
T Consensus 17 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~---~ 89 (281)
T 1mp8_A 17 IELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCT----SDSVREKFLQEALTMRQFDHPHIVKLIGVITEN---P 89 (281)
T ss_dssp EEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTT----SHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSS---S
T ss_pred eEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccC----CHHHHHHHHHHHHHHHhCCCCccceEEEEEccC---c
Confidence 4677889999999999998643 3468888765322 233456799999999999999999999998543 4
Q ss_pred EEEEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCC
Q 004979 505 RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT 584 (721)
Q Consensus 505 ~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~ 584 (721)
.++||||+++|+|.+++... ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 90 ~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 166 (281)
T 1mp8_A 90 VWIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLESKR--FVHRDIAARNVLVSSNDCVKLGDFGLSRYM 166 (281)
T ss_dssp CEEEEECCTTEEHHHHHHHT-TTTSCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEEEETTEEEECC-------
T ss_pred cEEEEecCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCC--eecccccHHHEEECCCCCEEECcccccccc
Confidence 58999999999999998643 346899999999999999999999998 999999999999999999999999988643
Q ss_pred CC----------CCccccchhhcccCCCCCCccHHHHHHHHHHHHh-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCc
Q 004979 585 TA----------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPT 653 (721)
Q Consensus 585 ~~----------~~~~~~apE~~~~~~~s~ksDVwSfGvvL~Ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 653 (721)
.. ++..|+|||.+....++.++|||||||++|||++ |+.||..... .+....+..+..
T Consensus 167 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~--~~~~~~i~~~~~--------- 235 (281)
T 1mp8_A 167 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN--NDVIGRIENGER--------- 235 (281)
T ss_dssp ------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCG--GGHHHHHHTTCC---------
T ss_pred CcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCH--HHHHHHHHcCCC---------
Confidence 22 2236999999998999999999999999999997 9999964332 222222222211
Q ss_pred cccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhc
Q 004979 654 LKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAM 696 (721)
Q Consensus 654 l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~i~~~ 696 (721)
...+..++.++.+++.+||+.||++||++.|+++.|+++.+.
T Consensus 236 -~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 277 (281)
T 1mp8_A 236 -LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE 277 (281)
T ss_dssp -CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 112234557789999999999999999999999999998654
No 112
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=2.5e-38 Score=341.06 Aligned_cols=242 Identities=19% Similarity=0.245 Sum_probs=196.4
Q ss_pred hhhhCcCCCCceeEEEEEEe-cCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEEE
Q 004979 429 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 507 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~-~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~l 507 (721)
+++++.+|+|+||+||+|+. .++..||||++...... .....+.+.+|++++++++|||||++++++...+ ..++
T Consensus 56 y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--~~~l 131 (348)
T 1u5q_A 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQ--SNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREH--TAWL 131 (348)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSC--HHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEE
T ss_pred eeeeeEEccCCCEEEEEEEEccCCeEEEEEEEcccccc--chHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC--eEEE
Confidence 36678899999999999995 57889999988654322 2334567999999999999999999999998876 6799
Q ss_pred EEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCCC--
Q 004979 508 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT-- 585 (721)
Q Consensus 508 V~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~~-- 585 (721)
||||+. |+|.+++.. ....+++..+..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++...
T Consensus 132 v~e~~~-g~l~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~ 207 (348)
T 1u5q_A 132 VMEYCL-GSASDLLEV-HKKPLQEVEIAAVTHGALQGLAYLHSHN--MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA 207 (348)
T ss_dssp EEECCS-EEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB
T ss_pred EEecCC-CCHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCC--eeeCCCCHHHEEECCCCCEEEeeccCceecCCC
Confidence 999997 688888753 3457999999999999999999999998 9999999999999999999999999986433
Q ss_pred ---CCCccccchhhcc---cCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccH
Q 004979 586 ---AAKTGSAAMELLE---TSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQE 659 (721)
Q Consensus 586 ---~~~~~~~apE~~~---~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 659 (721)
.++..|+|||.+. ...++.++|||||||++|||+||+.||... +.............+. . ...
T Consensus 208 ~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~--~~~~~~~~~~~~~~~~--~-------~~~ 276 (348)
T 1u5q_A 208 NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM--NAMSALYHIAQNESPA--L-------QSG 276 (348)
T ss_dssp CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTS--CHHHHHHHHHHSCCCC--C-------CCT
T ss_pred CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC--ChHHHHHHHHhcCCCC--C-------CCC
Confidence 3566799999984 567899999999999999999999999633 3333333333332211 1 112
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004979 660 NVLEELLVVIKNCVHPDPKQRPSMRGIAAK 689 (721)
Q Consensus 660 ~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 689 (721)
..+.++.+++.+||+.||++|||+.|+++.
T Consensus 277 ~~~~~l~~li~~~l~~dP~~Rps~~~ll~h 306 (348)
T 1u5q_A 277 HWSEYFRNFVDSCLQKIPQDRPTSEVLLKH 306 (348)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred CCCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 344678899999999999999999999864
No 113
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=2.5e-38 Score=332.21 Aligned_cols=250 Identities=16% Similarity=0.197 Sum_probs=193.7
Q ss_pred hhhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEEE
Q 004979 429 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 507 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~l 507 (721)
+++++.+|+|+||+||+|+.. +++.||+|++...... ....+.+.+|++++++++||||+++++++.+.+ ..++
T Consensus 4 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~l 78 (292)
T 3o0g_A 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDD---EGVPSSALREICLLKELKHKNIVRLHDVLHSDK--KLTL 78 (292)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSS---TTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETT--EEEE
T ss_pred ceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCc---CCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCC--EEEE
Confidence 366788999999999999965 6889999998754322 234467889999999999999999999998877 6799
Q ss_pred EEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCCC--
Q 004979 508 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT-- 585 (721)
Q Consensus 508 V~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~~-- 585 (721)
||||+++ ++.+++.. ....+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 79 v~e~~~~-~l~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lH~~~--ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 154 (292)
T 3o0g_A 79 VFEFCDQ-DLKKYFDS-CNGDLDPEIVKSFLFQLLKGLGFCHSRN--VLHRDLKPQNLLINRNGELKLANFGLARAFGIP 154 (292)
T ss_dssp EEECCSE-EHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTSCEEECCCTTCEECCSC
T ss_pred EEecCCC-CHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEcCCCCEEEeecccceecCCc
Confidence 9999975 66666543 3456999999999999999999999998 9999999999999999999999999985322
Q ss_pred -------CCCccccchhhcccCC-CCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCC-Ccccc------
Q 004979 586 -------AAKTGSAAMELLETSA-VDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQP-LKDIV------ 650 (721)
Q Consensus 586 -------~~~~~~~apE~~~~~~-~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~-~~~~~------ 650 (721)
.++..|+|||.+.+.. ++.++|||||||++|||+||..||... .+..+....+...... .....
T Consensus 155 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 233 (292)
T 3o0g_A 155 VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPG-NDVDDQLKRIFRLLGTPTEEQWPSMTKL 233 (292)
T ss_dssp CSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCC-SSHHHHHHHHHHHHCCCCTTTCTTGGGS
T ss_pred cccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCC-CCHHHHHHHHHHHhCCCChhhhhhhccc
Confidence 2355799999987665 899999999999999999998886433 2333333333221110 00000
Q ss_pred -----------CCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004979 651 -----------DPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 688 (721)
Q Consensus 651 -----------d~~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 688 (721)
........+..+.++.+|+.+||+.||++|||++|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 234 PDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp TTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 00111122345678899999999999999999999975
No 114
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=4.6e-39 Score=337.71 Aligned_cols=265 Identities=14% Similarity=0.190 Sum_probs=203.8
Q ss_pred hhhhhCcCCCCceeEEEEEEe-cCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEE
Q 004979 428 FSNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRM 506 (721)
Q Consensus 428 ~~~ii~~lg~G~~g~Vyk~~~-~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~ 506 (721)
-+++.+.+|+|+||+||+|+. .+++.||||++...... ..+.+|++++.+++|++++..++++...+. ..+
T Consensus 10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-------~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~-~~~ 81 (296)
T 4hgt_A 10 RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH-------PQLHIESKIYKMMQGGVGIPTIRWCGAEGD-YNV 81 (296)
T ss_dssp -CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---C-------CCHHHHHHHHHHHTTSTTCCCEEEEEEETT-EEE
T ss_pred ceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccc-------hHHHHHHHHHHHhcCCCCCCeeeeecCCCC-ceE
Confidence 347788899999999999996 57888999986543321 357889999999999998888877754332 579
Q ss_pred EEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEe---CCCCcEEEeccCCCCC
Q 004979 507 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYL---TEDYAAKISDFSFWNN 583 (721)
Q Consensus 507 lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl---~~~~~~kL~DFGla~~ 583 (721)
+||||+ +|+|.+++.. ....+++..+..++.|++.||+|||+.+ |+||||||+|||+ ++++.+||+|||+++.
T Consensus 82 lv~e~~-~~~L~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~--ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~ 157 (296)
T 4hgt_A 82 MVMELL-GPSLEDLFNF-CSRKFSLKTVLLLADQMISRIEYIHSKN--FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKK 157 (296)
T ss_dssp EEEECC-CCBHHHHHHH-TTSCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECCGGGTTCEEECCCTTCEE
T ss_pred EEEEcc-CCCHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHeeeeccCCCCeEEEecCcccee
Confidence 999999 9999999863 3456999999999999999999999998 9999999999999 7889999999998753
Q ss_pred C----------------CCCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCCCC-HHHHHHHHhhcCCCC
Q 004979 584 T----------------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGS-LENWASEYLKGEQPL 646 (721)
Q Consensus 584 ~----------------~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~-~~~~~~~~~~~~~~~ 646 (721)
. ..++..|+|||.+.+..++.++|||||||++|||+||+.||...... ..+...........
T Consensus 158 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~- 236 (296)
T 4hgt_A 158 YRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMS- 236 (296)
T ss_dssp CBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHH-
T ss_pred ccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhccccc-
Confidence 2 23456789999999999999999999999999999999999743211 11111111110000
Q ss_pred ccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCChhHHHHH
Q 004979 647 KDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPDGATPKLSPLWWAEL 713 (721)
Q Consensus 647 ~~~~d~~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~p~~~~~~~~~l 713 (721)
.........++.++.+++.+||+.||++||++.||++.|+++...... ....+++|+.+
T Consensus 237 -----~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~~---~~~~~~dw~~~ 295 (296)
T 4hgt_A 237 -----TPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGF---SYDYVFDWNML 295 (296)
T ss_dssp -----SCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHTC---CTTCCCGGGGC
T ss_pred -----chhhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhCC---CccCccchhhc
Confidence 000011123357899999999999999999999999999998876543 34557778754
No 115
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=3.7e-38 Score=334.17 Aligned_cols=253 Identities=22% Similarity=0.397 Sum_probs=196.7
Q ss_pred hhhCcCCCCceeEEEEEEec----CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCc--
Q 004979 430 NIIGSFSDGTVGTVYKGTLS----SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPF-- 503 (721)
Q Consensus 430 ~ii~~lg~G~~g~Vyk~~~~----~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~-- 503 (721)
.+.+.+|+|+||.||+|+.. ++..||+|++..... .....+.+.+|++++++++||||+++++++.+.+..
T Consensus 37 ~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 113 (313)
T 3brb_A 37 ILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNS---SQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGI 113 (313)
T ss_dssp EEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CC---CHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC------
T ss_pred eeccceeecCCeEEEEEEEeccCCceeEEEEEEEecccc---chhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCC
Confidence 66778999999999999864 344799998865432 233456799999999999999999999999875422
Q ss_pred -eEEEEEecCCCCChhhhhhhc----cCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEecc
Q 004979 504 -TRMMVFEYSPNGSLFEHLHIQ----EAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF 578 (721)
Q Consensus 504 -~~~lV~Ey~~~GsL~~~l~~~----~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DF 578 (721)
..++||||+++|+|.+++... ....+++..+..|+.|++.||+|||+.+ |+||||||+|||++.++.+||+||
T Consensus 114 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~dikp~NIli~~~~~~kl~Df 191 (313)
T 3brb_A 114 PKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRN--FLHRDLAARNCMLRDDMTVCVADF 191 (313)
T ss_dssp -CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTT--CCCCCCSGGGEEECTTSCEEECSC
T ss_pred cccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCcceEEEcCCCcEEEeec
Confidence 358999999999999998532 3356999999999999999999999988 999999999999999999999999
Q ss_pred CCCCCCCC-----------CCccccchhhcccCCCCCCccHHHHHHHHHHHHh-CCCcccCCCCCHHHHHHHHhhcCCCC
Q 004979 579 SFWNNTTA-----------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPL 646 (721)
Q Consensus 579 Gla~~~~~-----------~~~~~~apE~~~~~~~s~ksDVwSfGvvL~Ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~ 646 (721)
|+++.... ++..|+|||.+.+..++.++|||||||++|||+| |+.||..... .+.......+..
T Consensus 192 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~--~~~~~~~~~~~~-- 267 (313)
T 3brb_A 192 GLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQN--HEMYDYLLHGHR-- 267 (313)
T ss_dssp SCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG--GGHHHHHHTTCC--
T ss_pred CcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCH--HHHHHHHHcCCC--
Confidence 99864321 2346899999999999999999999999999999 8889864332 222223322211
Q ss_pred ccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCCC
Q 004979 647 KDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPD 699 (721)
Q Consensus 647 ~~~~d~~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~ 699 (721)
...+..++.++.+++.+||+.||++||++.|+++.|+++.+..++
T Consensus 268 --------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~lp~ 312 (313)
T 3brb_A 268 --------LKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESLPD 312 (313)
T ss_dssp --------CCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC--
T ss_pred --------CCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCC
Confidence 112234557799999999999999999999999999999876543
No 116
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4e-38 Score=337.43 Aligned_cols=246 Identities=20% Similarity=0.333 Sum_probs=197.1
Q ss_pred hhhCcCCCCceeEEEEEEecCC-----cEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCce
Q 004979 430 NIIGSFSDGTVGTVYKGTLSSG-----VEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFT 504 (721)
Q Consensus 430 ~ii~~lg~G~~g~Vyk~~~~~~-----~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~ 504 (721)
.+.+.+|+|+||+||+|+.... ..||||++.... .......+.+|++++++++||||+++++++.+.+ .
T Consensus 47 ~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~ 120 (333)
T 1mqb_A 47 TRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY----TEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYK--P 120 (333)
T ss_dssp EEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC----CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS--S
T ss_pred hcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCC----CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCC--C
Confidence 4557789999999999986532 358888876432 2334567999999999999999999999998766 6
Q ss_pred EEEEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCC
Q 004979 505 RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT 584 (721)
Q Consensus 505 ~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~ 584 (721)
.++||||+++|+|.+++.. ....+++..+..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++..
T Consensus 121 ~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~ 197 (333)
T 1mqb_A 121 MMIITEYMENGALDKFLRE-KDGEFSVLQLVGMLRGIAAGMKYLANMN--YVHRDLAARNILVNSNLVCKVSDFGLSRVL 197 (333)
T ss_dssp EEEEEECCTTEEHHHHHHH-TTTCSCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECTTCCEEECCCCC----
T ss_pred cEEEEeCCCCCcHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeCCCCChheEEECCCCcEEECCCCcchhh
Confidence 7999999999999999864 3456999999999999999999999998 999999999999999999999999997643
Q ss_pred CC------------CCccccchhhcccCCCCCCccHHHHHHHHHHHHh-CCCcccCCCCCHHHHHHHHhhcCCCCccccC
Q 004979 585 TA------------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVD 651 (721)
Q Consensus 585 ~~------------~~~~~~apE~~~~~~~s~ksDVwSfGvvL~Ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d 651 (721)
.. ++..|+|||.+....++.++|||||||++|||+| |+.||... ...+....+..+.. .
T Consensus 198 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~--~~~~~~~~~~~~~~-~----- 269 (333)
T 1mqb_A 198 EDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWEL--SNHEVMKAINDGFR-L----- 269 (333)
T ss_dssp -------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC--CHHHHHHHHHTTCC-C-----
T ss_pred ccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccC--CHHHHHHHHHCCCc-C-----
Confidence 21 1235999999999999999999999999999999 99999533 23333333332211 1
Q ss_pred CccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhc
Q 004979 652 PTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAM 696 (721)
Q Consensus 652 ~~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~i~~~ 696 (721)
..+..++.++.+++.+||+.||++||++.|+++.|+++...
T Consensus 270 ----~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~ 310 (333)
T 1mqb_A 270 ----PTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRA 310 (333)
T ss_dssp ----CCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred ----CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 11223456789999999999999999999999999987664
No 117
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.7e-38 Score=347.05 Aligned_cols=262 Identities=18% Similarity=0.239 Sum_probs=208.2
Q ss_pred hhhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEEE
Q 004979 429 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 507 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~l 507 (721)
|.+.+.+|+|+||+||+|+.. +++.||||++...... ...+.+.+|++++++++|||||++++++...+....++
T Consensus 11 y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~----~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~l 86 (396)
T 4eut_A 11 WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFL----RPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVL 86 (396)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGG----SCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEE
T ss_pred eEEEEEEEcCCCeEEEEEEECCCCcEEEEEEecccccc----chHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEE
Confidence 467788999999999999965 5889999998643221 12456889999999999999999999998765446799
Q ss_pred EEecCCCCChhhhhhhcc-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEe----CCCCcEEEeccCCCC
Q 004979 508 VFEYSPNGSLFEHLHIQE-AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYL----TEDYAAKISDFSFWN 582 (721)
Q Consensus 508 V~Ey~~~GsL~~~l~~~~-~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl----~~~~~~kL~DFGla~ 582 (721)
||||+++|+|.+++.... ...+++..+..|+.||+.||+|||+++ |+||||||+|||+ +.++.+||+|||+++
T Consensus 87 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~ 164 (396)
T 4eut_A 87 IMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG--IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164 (396)
T ss_dssp EECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEEEECTTSCEEEEECCGGGCE
T ss_pred EEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCC--EEECCcCHHHEEEeecCCCceeEEEecCCCce
Confidence 999999999999997543 234999999999999999999999998 9999999999999 788889999999985
Q ss_pred CC--------CCCCccccchhhccc--------CCCCCCccHHHHHHHHHHHHhCCCcccCCC--CCHHHHHHHHhhcCC
Q 004979 583 NT--------TAAKTGSAAMELLET--------SAVDLESNVYSFGTILFEMITGRISYSIEN--GSLENWASEYLKGEQ 644 (721)
Q Consensus 583 ~~--------~~~~~~~~apE~~~~--------~~~s~ksDVwSfGvvL~ElltG~~P~~~~~--~~~~~~~~~~~~~~~ 644 (721)
.. ..++..|+|||.+.. ..++.++|||||||++|||+||+.||.... ....+.......+..
T Consensus 165 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p 244 (396)
T 4eut_A 165 ELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKP 244 (396)
T ss_dssp ECCCGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCC
T ss_pred EccCCCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCC
Confidence 42 234568999998864 567889999999999999999999997422 233444555554422
Q ss_pred CC--c---cccC---------CccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhc
Q 004979 645 PL--K---DIVD---------PTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAM 696 (721)
Q Consensus 645 ~~--~---~~~d---------~~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~i~~~ 696 (721)
.. . ...+ +............+.+++.+||+.||++||++.|+++.++++...
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~ 310 (396)
T 4eut_A 245 SGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR 310 (396)
T ss_dssp TTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred cccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence 10 0 0000 111134467788899999999999999999999999999987664
No 118
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=1e-38 Score=335.32 Aligned_cols=264 Identities=14% Similarity=0.196 Sum_probs=204.9
Q ss_pred hhhhCcCCCCceeEEEEEEe-cCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEEE
Q 004979 429 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 507 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~-~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~l 507 (721)
+++.+.+|+|+||+||+|+. .+++.||||++...... +.+.+|++++++++|++++..++++...+. ..++
T Consensus 11 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-------~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~-~~~l 82 (296)
T 3uzp_A 11 YRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH-------PQLHIESKIYKMMQGGVGIPTIRWCGAEGD-YNVM 82 (296)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSC-------CHHHHHHHHHHHHTTSTTCCCEEEEEEETT-EEEE
T ss_pred EEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcch-------hHHHHHHHHHHHhhcCCCCCccccccCCCC-ceEE
Confidence 36778899999999999996 57889999987654322 358899999999999998877777654332 5799
Q ss_pred EEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEe---CCCCcEEEeccCCCCCC
Q 004979 508 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYL---TEDYAAKISDFSFWNNT 584 (721)
Q Consensus 508 V~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl---~~~~~~kL~DFGla~~~ 584 (721)
||||+ +|+|.+++.. ....+++..+..++.|++.||+|||+++ |+||||||+|||+ ++++.+||+|||+++..
T Consensus 83 v~e~~-~~~L~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~--ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~ 158 (296)
T 3uzp_A 83 VMELL-GPSLEDLFNF-CSRKFSLKTVLLLADQMISRIEYIHSKN--FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKY 158 (296)
T ss_dssp EEECC-CCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEECCGGGTTCEEECCCTTCEEC
T ss_pred EEEec-CCCHHHHHHh-hccCCCHHHHHHHHHHHHHHHHHHHhCC--eeeCCCCHHHeEEecCCCCCeEEEeeCCCcccc
Confidence 99999 9999999863 3456999999999999999999999998 9999999999999 48899999999987532
Q ss_pred ----------------CCCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCCC-CHHHHHHHHhhcCCCCc
Q 004979 585 ----------------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENG-SLENWASEYLKGEQPLK 647 (721)
Q Consensus 585 ----------------~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~-~~~~~~~~~~~~~~~~~ 647 (721)
..++..|+|||.+.+..++.++|||||||++|||+||+.||..... ...+..........
T Consensus 159 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~--- 235 (296)
T 3uzp_A 159 RDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKM--- 235 (296)
T ss_dssp BCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHH---
T ss_pred cccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhccccc---
Confidence 2345578999999999999999999999999999999999974321 11111111111000
Q ss_pred cccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCChhHHHHH
Q 004979 648 DIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPDGATPKLSPLWWAEL 713 (721)
Q Consensus 648 ~~~d~~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~p~~~~~~~~~l 713 (721)
..........++.++.+++.+||+.||++||++.||++.|+++...... +...+++|+.+
T Consensus 236 ---~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~---~~~~~~dw~~~ 295 (296)
T 3uzp_A 236 ---STPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGF---SYDYVFDWNML 295 (296)
T ss_dssp ---HSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTTC---CSSCCCGGGGC
T ss_pred ---CCchHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcCC---ccccccccccc
Confidence 0000111123457799999999999999999999999999998876643 34556888754
No 119
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=3.6e-38 Score=341.59 Aligned_cols=240 Identities=19% Similarity=0.248 Sum_probs=191.5
Q ss_pred hhhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEEE
Q 004979 429 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 507 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~l 507 (721)
|++++.+|+|+||+||+++.. +++.||||++...... .+.+.+|+.++++++|||||++++++.+.+ ..++
T Consensus 22 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~------~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--~~~l 93 (361)
T 3uc3_A 22 YDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAI------DENVQREIINHRSLRHPNIVRFKEVILTPT--HLAI 93 (361)
T ss_dssp EEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTS------CHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEE
T ss_pred EEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccc------cHHHHHHHHHHHhCCCCCCCcEEEEEeeCC--EEEE
Confidence 477889999999999999965 7889999988643321 246889999999999999999999999877 6799
Q ss_pred EEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCc--EEEeccCCCCCC-
Q 004979 508 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYA--AKISDFSFWNNT- 584 (721)
Q Consensus 508 V~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~--~kL~DFGla~~~- 584 (721)
||||+++|+|.+++.. ...+++..+..++.|++.||+|||+++ |+||||||+|||++.++. +||+|||+++..
T Consensus 94 v~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~ql~~~L~~LH~~~--ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~ 169 (361)
T 3uc3_A 94 IMEYASGGELYERICN--AGRFSEDEARFFFQQLLSGVSYCHSMQ--ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSV 169 (361)
T ss_dssp EEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT--CCSCCCCGGGEEECSSSSCCEEECCCCCC----
T ss_pred EEEeCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEEcCCCCceEEEeecCcccccc
Confidence 9999999999999864 346899999999999999999999998 999999999999987765 999999988632
Q ss_pred -------CCCCccccchhhcccCCCCCC-ccHHHHHHHHHHHHhCCCcccCCC--CCHHHHHHHHhhcCCCCccccCCcc
Q 004979 585 -------TAAKTGSAAMELLETSAVDLE-SNVYSFGTILFEMITGRISYSIEN--GSLENWASEYLKGEQPLKDIVDPTL 654 (721)
Q Consensus 585 -------~~~~~~~~apE~~~~~~~s~k-sDVwSfGvvL~ElltG~~P~~~~~--~~~~~~~~~~~~~~~~~~~~~d~~l 654 (721)
..++..|+|||.+.+..++.+ +|||||||++|||+||+.||.... ...................
T Consensus 170 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~------ 243 (361)
T 3uc3_A 170 LHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPD------ 243 (361)
T ss_dssp -----------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCCCCCT------
T ss_pred ccCCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCCCCCC------
Confidence 235668999999988887665 899999999999999999997432 2333444444332221111
Q ss_pred ccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004979 655 KSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 689 (721)
Q Consensus 655 ~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 689 (721)
....+.++.+|+.+||+.||++|||+.|+++.
T Consensus 244 ---~~~~s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 244 ---DIRISPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp ---TSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred ---cCCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 11234678899999999999999999999864
No 120
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=8.5e-39 Score=341.78 Aligned_cols=245 Identities=20% Similarity=0.348 Sum_probs=193.4
Q ss_pred hhhhCcCCCCceeEEEEEEec-CCcEE----EEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCc
Q 004979 429 SNIIGSFSDGTVGTVYKGTLS-SGVEI----AVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPF 503 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~~-~~~~v----avk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~ 503 (721)
+++++.+|+|+||+||+|+.. ++..+ ++|.+.... .....+.+.+|++++++++||||+++++++....
T Consensus 17 y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~----~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-- 90 (327)
T 3lzb_A 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT----SPKANKEILDEAYVMASVDNPHVCRLLGICLTST-- 90 (327)
T ss_dssp EEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCS----SCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS--
T ss_pred ceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeecccc----CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC--
Confidence 367889999999999999954 45444 555443221 1223467999999999999999999999998754
Q ss_pred eEEEEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCC
Q 004979 504 TRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN 583 (721)
Q Consensus 504 ~~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~ 583 (721)
.++|+||+++|+|.+++... ...+++..+..|+.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++.
T Consensus 91 -~~~v~~~~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dikp~NIl~~~~~~~kL~DfG~a~~ 166 (327)
T 3lzb_A 91 -VQLITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKL 166 (327)
T ss_dssp -EEEEECCCSSCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEEEETTEEEECCTTC---
T ss_pred -ceEEEEecCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHhhCC--CcCCCCCHHHEEEcCCCCEEEccCcceeE
Confidence 57999999999999998643 456999999999999999999999998 99999999999999999999999999864
Q ss_pred CCC-----------CCccccchhhcccCCCCCCccHHHHHHHHHHHHh-CCCcccCCCCCHHHHHHHHhhcCCCCccccC
Q 004979 584 TTA-----------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVD 651 (721)
Q Consensus 584 ~~~-----------~~~~~~apE~~~~~~~s~ksDVwSfGvvL~Ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d 651 (721)
... ++..|+|||.+.+..++.++|||||||++|||+| |+.||...... +.......+.. .
T Consensus 167 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~--~~~~~~~~~~~-~----- 238 (327)
T 3lzb_A 167 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--EISSILEKGER-L----- 238 (327)
T ss_dssp -------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--GHHHHHHTTCC-C-----
T ss_pred ccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHH--HHHHHHHcCCC-C-----
Confidence 321 2336999999999999999999999999999999 99999643322 22222222111 0
Q ss_pred CccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhh
Q 004979 652 PTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITA 695 (721)
Q Consensus 652 ~~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~i~~ 695 (721)
..+..++.++.+++.+||+.||++||++.|+++.|+++..
T Consensus 239 ----~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 278 (327)
T 3lzb_A 239 ----PQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp ----CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHT
T ss_pred ----CCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 1122345678899999999999999999999999999864
No 121
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.5e-37 Score=332.58 Aligned_cols=254 Identities=22% Similarity=0.347 Sum_probs=195.8
Q ss_pred hhhhhhCcCCCCceeEEEEEEecCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcC--CCCccceEeEEEecCCC--
Q 004979 427 DFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV--NHKNFVNLIGYCEEDEP-- 502 (721)
Q Consensus 427 ~~~~ii~~lg~G~~g~Vyk~~~~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l--~H~nIv~l~g~~~~~~~-- 502 (721)
+-+++++.+|+|+||+||+|+.. +..||||++.... ...+.+|.+++..+ +||||+++++++.....
T Consensus 37 ~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--------~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~ 107 (337)
T 3mdy_A 37 KQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTE--------EASWFRETEIYQTVLMRHENILGFIAADIKGTGSW 107 (337)
T ss_dssp HHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGG--------HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGG
T ss_pred cceEEEeEeecCCCeEEEEEEEC-CceEEEEEEeccc--------cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCC
Confidence 33478899999999999999976 8899999875321 13345555655554 99999999999987632
Q ss_pred ceEEEEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcC------CCCeEeeCCCCCCeEeCCCCcEEEe
Q 004979 503 FTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQL------TPPIAHRNLQSSSIYLTEDYAAKIS 576 (721)
Q Consensus 503 ~~~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~------~~~IvHrDLKp~NILl~~~~~~kL~ 576 (721)
...++||||+++|+|.++++. ..+++..+..++.|++.||+|||+. .++|+||||||+|||++.++.+||+
T Consensus 108 ~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~ 184 (337)
T 3mdy_A 108 TQLYLITDYHENGSLYDYLKS---TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIA 184 (337)
T ss_dssp CEEEEEECCCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEEC
T ss_pred CceEEEEeccCCCcHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEE
Confidence 267999999999999999963 3589999999999999999999987 2239999999999999999999999
Q ss_pred ccCCCCCC-------------CCCCccccchhhcccCCCCCC------ccHHHHHHHHHHHHhC----------CCcccC
Q 004979 577 DFSFWNNT-------------TAAKTGSAAMELLETSAVDLE------SNVYSFGTILFEMITG----------RISYSI 627 (721)
Q Consensus 577 DFGla~~~-------------~~~~~~~~apE~~~~~~~s~k------sDVwSfGvvL~ElltG----------~~P~~~ 627 (721)
|||+++.. ..++..|+|||.+....++.+ +|||||||++|||+|| +.||..
T Consensus 185 Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~ 264 (337)
T 3mdy_A 185 DLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHD 264 (337)
T ss_dssp CCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTT
T ss_pred eCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhh
Confidence 99987421 235567999999987777665 9999999999999999 666643
Q ss_pred CC---CCHHHHHHHHhhcCCCCccccCCccc--cccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCC
Q 004979 628 EN---GSLENWASEYLKGEQPLKDIVDPTLK--SFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEP 698 (721)
Q Consensus 628 ~~---~~~~~~~~~~~~~~~~~~~~~d~~l~--~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 698 (721)
.. ...... ........ ..+... .....++.++.+++.+||+.||++||++.||++.|+++.+...
T Consensus 265 ~~~~~~~~~~~-~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~ 334 (337)
T 3mdy_A 265 LVPSDPSYEDM-REIVCIKK-----LRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQD 334 (337)
T ss_dssp TSCSSCCHHHH-HHHHTTSC-----CCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTTT
T ss_pred hcCCCCchhhh-HHHHhhhc-----cCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhcc
Confidence 21 111222 22111111 111111 1124678899999999999999999999999999999887654
No 122
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=5.1e-38 Score=326.77 Aligned_cols=238 Identities=22% Similarity=0.340 Sum_probs=179.5
Q ss_pred hhhhCcCCCCceeEEEEEEe-cCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEEE
Q 004979 429 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 507 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~-~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~l 507 (721)
+++++.+|+|+||+||+|+. .+++.||+|++....... ....+.+.+|++++++++||||+++++++.+.+ ..++
T Consensus 15 y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~l 90 (275)
T 2eue_A 15 YQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAK--SDMQGRIEREISYLRLLRHPHIIKLYDVIKSKD--EIIM 90 (275)
T ss_dssp BCCCC---------EEEEECTTTCCEEEEEEECSCC-------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--CEEE
T ss_pred eEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcch--HHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCC--eEEE
Confidence 36788999999999999985 468899999986543221 223467899999999999999999999998876 6799
Q ss_pred EEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCCC--
Q 004979 508 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT-- 585 (721)
Q Consensus 508 V~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~~-- 585 (721)
||||+ +|+|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++...
T Consensus 91 v~e~~-~~~l~~~~~~--~~~~~~~~~~~~~~~i~~~l~~LH~~~--i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 165 (275)
T 2eue_A 91 VIEYA-GNELFDYIVQ--RDKMSEQEARRFFQQIISAVEYCHRHK--IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG 165 (275)
T ss_dssp EEECC-CEEHHHHHHT--SSSCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCSGGGEEECTTSCEEECCSSCC------
T ss_pred Eehhc-CCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC--CeeccCChHhEEECCCCCEEEeecccceeccCc
Confidence 99999 7788888753 356999999999999999999999998 9999999999999999999999999885332
Q ss_pred ------CCCccccchhhcccCCC-CCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004979 586 ------AAKTGSAAMELLETSAV-DLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 658 (721)
Q Consensus 586 ------~~~~~~~apE~~~~~~~-s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 658 (721)
.++..|+|||.+.+..+ +.++|||||||++|||+||+.||... ...........+.... +
T Consensus 166 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~--~~~~~~~~~~~~~~~~-----------~ 232 (275)
T 2eue_A 166 NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDE--SIPVLFKNISNGVYTL-----------P 232 (275)
T ss_dssp ---------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHTCCCC-----------C
T ss_pred ccccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCC--CHHHHHHHHHhCCCCC-----------C
Confidence 24567999999987765 78999999999999999999999643 3344444443332221 2
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004979 659 ENVLEELLVVIKNCVHPDPKQRPSMRGIAA 688 (721)
Q Consensus 659 ~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 688 (721)
...+.++.+++.+||+.||++|||+.|+++
T Consensus 233 ~~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 262 (275)
T 2eue_A 233 KFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp TTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ccCCHHHHHHHHHHhhcCHhHCCCHHHHhh
Confidence 234567889999999999999999999975
No 123
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=4.9e-38 Score=339.04 Aligned_cols=241 Identities=20% Similarity=0.270 Sum_probs=187.0
Q ss_pred hhhhhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceE
Q 004979 427 DFSNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTR 505 (721)
Q Consensus 427 ~~~~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~ 505 (721)
+.+++.+.+|+|+||+||+|+.. +++.||||++.... ..+.+.+|++++++++||||+++++++.+.+ ..
T Consensus 53 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~-------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~ 123 (349)
T 2w4o_A 53 DFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV-------DKKIVRTEIGVLLRLSHPNIIKLKEIFETPT--EI 123 (349)
T ss_dssp GTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC-----------------CHHHHHCCCTTBCCEEEEEECSS--EE
T ss_pred CcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch-------hHHHHHHHHHHHHhCCCCCCcceeeeEecCC--eE
Confidence 33577788999999999999976 57889999886432 2356889999999999999999999998876 67
Q ss_pred EEEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCC---CCcEEEeccCCCC
Q 004979 506 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTE---DYAAKISDFSFWN 582 (721)
Q Consensus 506 ~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~---~~~~kL~DFGla~ 582 (721)
++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+|||++. ++.+||+|||+++
T Consensus 124 ~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~L~~LH~~~--ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~ 199 (349)
T 2w4o_A 124 SLVLELVTGGELFDRIVE--KGYYSERDAADAVKQILEAVAYLHENG--IVHRDLKPENLLYATPAPDAPLKIADFGLSK 199 (349)
T ss_dssp EEEECCCCSCBHHHHHTT--CSSCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEESSSSTTCCEEECCCC---
T ss_pred EEEEEeCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC--eEecCCCcccEEEecCCCCCCEEEccCcccc
Confidence 999999999999999863 356899999999999999999999998 999999999999975 8999999999976
Q ss_pred CCC--------CCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcc
Q 004979 583 NTT--------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTL 654 (721)
Q Consensus 583 ~~~--------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 654 (721)
... .++..|+|||.+.+..++.++|||||||++|||+||+.||...... ......+....... ..
T Consensus 200 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~~~~~i~~~~~~~---~~--- 272 (349)
T 2w4o_A 200 IVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGD-QFMFRRILNCEYYF---IS--- 272 (349)
T ss_dssp -------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCH-HHHHHHHHTTCCCC---CT---
T ss_pred ccCcccccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCccc-HHHHHHHHhCCCcc---CC---
Confidence 432 2456799999999999999999999999999999999999644322 22233333322111 11
Q ss_pred ccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004979 655 KSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 688 (721)
Q Consensus 655 ~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 688 (721)
......+.++.+|+.+||+.||++||++.|+++
T Consensus 273 -~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 273 -PWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp -TTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred -chhhhCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 112344567899999999999999999999986
No 124
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=1e-38 Score=332.66 Aligned_cols=246 Identities=25% Similarity=0.419 Sum_probs=197.8
Q ss_pred hhhhCcCCCCceeEEEEEEecCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEEEE
Q 004979 429 SNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 508 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~lV 508 (721)
+++++.+|+|+||+||+|+.. +..|+||++.... ..+.+.+|++++++++||||+++++++.+.+. ..++|
T Consensus 23 y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~-------~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~-~~~lv 93 (278)
T 1byg_A 23 LKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA-------TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKG-GLYIV 93 (278)
T ss_dssp EEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC---------HHHHHTHHHHTTCCCTTBCCEEEEECCC---CCEEE
T ss_pred ceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh-------HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCC-ceEEE
Confidence 367788999999999999875 7889999886432 23578999999999999999999999765432 46899
Q ss_pred EecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCCC---
Q 004979 509 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT--- 585 (721)
Q Consensus 509 ~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~~--- 585 (721)
|||+++|+|.+++.......+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++...
T Consensus 94 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 171 (278)
T 1byg_A 94 TEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN--FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ 171 (278)
T ss_dssp ECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEECTTSCEEECCCCC--------
T ss_pred EecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCC--ccccCCCcceEEEeCCCcEEEeeccccccccccc
Confidence 99999999999997544445889999999999999999999998 9999999999999999999999999876432
Q ss_pred ---CCCccccchhhcccCCCCCCccHHHHHHHHHHHHh-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHH
Q 004979 586 ---AAKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENV 661 (721)
Q Consensus 586 ---~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~Ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 661 (721)
.++..|+|||.+.+..++.++||||||+++|||+| |+.||.... ..+.......+.. ...+..+
T Consensus 172 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~--~~~~~~~~~~~~~----------~~~~~~~ 239 (278)
T 1byg_A 172 DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP--LKDVVPRVEKGYK----------MDAPDGC 239 (278)
T ss_dssp ----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSC--GGGHHHHHTTTCC----------CCCCTTC
T ss_pred cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCC--HHHHHHHHhcCCC----------CCCcccC
Confidence 23457999999998999999999999999999999 999996432 2222222222211 1122345
Q ss_pred HHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcC
Q 004979 662 LEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAME 697 (721)
Q Consensus 662 ~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 697 (721)
+.++.+++.+||+.||++||++.|+++.|+++....
T Consensus 240 ~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~~ 275 (278)
T 1byg_A 240 PPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTHE 275 (278)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhhh
Confidence 578899999999999999999999999999987654
No 125
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=1.2e-38 Score=343.15 Aligned_cols=260 Identities=12% Similarity=0.089 Sum_probs=192.2
Q ss_pred hhhhCcCCCCceeEEEEEEec----CCcEEEEEEeeeccccchh------hHHHHHHHHHHHHHhcCCCCccceEeEEEe
Q 004979 429 SNIIGSFSDGTVGTVYKGTLS----SGVEIAVTSTSVKSRADWS------KNLESQFRKKIDTLSKVNHKNFVNLIGYCE 498 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~~----~~~~vavk~~~~~~~~~~~------~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~ 498 (721)
+++.+.+|+|+||+||+|+.. ++..+++|+.......... ......+.+|+..+..++||||+++++++.
T Consensus 39 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~~~ 118 (345)
T 2v62_A 39 WVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGL 118 (345)
T ss_dssp EEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEEEE
T ss_pred EEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecccc
Confidence 467789999999999999975 5678999988654321110 011234778999999999999999999987
Q ss_pred cC--CCceEEEEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCC--cEE
Q 004979 499 ED--EPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDY--AAK 574 (721)
Q Consensus 499 ~~--~~~~~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~--~~k 574 (721)
.. +....++||||+ +|+|.+++.... .+++..+..|+.||+.||+|||+.+ |+||||||+|||++.++ .+|
T Consensus 119 ~~~~~~~~~~lv~e~~-~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dlkp~NIll~~~~~~~~k 193 (345)
T 2v62_A 119 TEFKGRSYRFMVMERL-GIDLQKISGQNG--TFKKSTVLQLGIRMLDVLEYIHENE--YVHGDIKAANLLLGYKNPDQVY 193 (345)
T ss_dssp EESSSCEEEEEEEECE-EEEHHHHCBGGG--BCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEEESSSTTSEE
T ss_pred cccCCCcEEEEEEecc-CCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCC--eeCCCcCHHHEEEccCCCCcEE
Confidence 62 123679999999 999999986433 7999999999999999999999998 99999999999999887 999
Q ss_pred EeccCCCCCC----------------CCCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHH
Q 004979 575 ISDFSFWNNT----------------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASE 638 (721)
Q Consensus 575 L~DFGla~~~----------------~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~ 638 (721)
|+|||+++.. ..++..|+|||.+.+..++.++|||||||++|||+||+.||.....+.......
T Consensus 194 L~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~ 273 (345)
T 2v62_A 194 LADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQTA 273 (345)
T ss_dssp ECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHHHH
T ss_pred EEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHHHH
Confidence 9999998532 234568999999999999999999999999999999999996433332222111
Q ss_pred HhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhh
Q 004979 639 YLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITA 695 (721)
Q Consensus 639 ~~~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~i~~ 695 (721)
................ ....++.++.+++.+||+.||++||++.+|++.|+++..
T Consensus 274 ~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 328 (345)
T 2v62_A 274 KTNLLDELPQSVLKWA--PSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGI 328 (345)
T ss_dssp HHHHHHTTTHHHHHHS--CTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred HHhhcccccHHHHhhc--cccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCC
Confidence 1100000110000000 001345689999999999999999999999999988654
No 126
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=6.4e-38 Score=326.74 Aligned_cols=239 Identities=21% Similarity=0.360 Sum_probs=196.5
Q ss_pred hhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEEEE
Q 004979 430 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 508 (721)
Q Consensus 430 ~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~lV 508 (721)
++.+.+|+|+||+||+|+.. ++..||+|++....... ......+.+|++++++++||||+++++++.+.+ ..++|
T Consensus 12 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv 87 (279)
T 3fdn_A 12 EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEK--AGVEHQLRREVEIQSHLRHPNILRLYGYFHDAT--RVYLI 87 (279)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHH--HTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEEE
T ss_pred EEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccch--hhHHHHHHHHHHHHHcCCCCCCcchhheEecCC--EEEEE
Confidence 67788999999999999865 56789999886432211 223467899999999999999999999998876 67999
Q ss_pred EecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCC----
Q 004979 509 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT---- 584 (721)
Q Consensus 509 ~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~---- 584 (721)
|||+++|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++...
T Consensus 88 ~e~~~~~~l~~~l~~~--~~~~~~~~~~~~~qi~~~l~~LH~~~--i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~ 163 (279)
T 3fdn_A 88 LEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 163 (279)
T ss_dssp ECCCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTTT--CEECCCCGGGEEECTTSCEEECSCCEESCC----
T ss_pred EecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC--EecccCChHhEEEcCCCCEEEEeccccccCCccc
Confidence 9999999999998643 45899999999999999999999988 999999999999999999999999987532
Q ss_pred ---CCCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHH
Q 004979 585 ---TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENV 661 (721)
Q Consensus 585 ---~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 661 (721)
..++..|+|||.+.+..++.++||||||+++|||++|+.||... ...+........... .+...
T Consensus 164 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~--~~~~~~~~~~~~~~~-----------~~~~~ 230 (279)
T 3fdn_A 164 RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN--TYQETYKRISRVEFT-----------FPDFV 230 (279)
T ss_dssp ----CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCS--SHHHHHHHHHHTCCC-----------CCTTS
T ss_pred ccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCC--cHHHHHHHHHhCCCC-----------CCCcC
Confidence 23456789999999999999999999999999999999999633 333333333332221 12234
Q ss_pred HHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004979 662 LEELLVVIKNCVHPDPKQRPSMRGIAAK 689 (721)
Q Consensus 662 ~~~l~~li~~Cl~~dP~~RPs~~evl~~ 689 (721)
+.++.+++.+||+.||++||++.|+++.
T Consensus 231 ~~~~~~li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 231 TEGARDLISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp CHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred CHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 4678899999999999999999999974
No 127
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=8.1e-39 Score=334.99 Aligned_cols=245 Identities=23% Similarity=0.344 Sum_probs=193.3
Q ss_pred hhhhCcCCCCceeEEEEEEecC-C-------cEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecC
Q 004979 429 SNIIGSFSDGTVGTVYKGTLSS-G-------VEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEED 500 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~~~-~-------~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~ 500 (721)
+++.+.+|+|+||+||+|+... + ..|++|++.... ....+.+.+|++++++++||||+++++++.+.
T Consensus 10 y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~-----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 84 (289)
T 4fvq_A 10 LIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAH-----RNYSESFFEAASMMSKLSHKHLVLNYGVCVCG 84 (289)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGG-----GGGHHHHHHHHHHHHTSCCTTBCCEEEEECCT
T ss_pred eeeeeeeccCCCceEEEEEEecccccccccchhhhhhhccccc-----HHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeC
Confidence 3677889999999999998653 3 468888875432 22346799999999999999999999999887
Q ss_pred CCceEEEEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCc--------
Q 004979 501 EPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYA-------- 572 (721)
Q Consensus 501 ~~~~~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~-------- 572 (721)
+ ..++||||+++|+|.+++... ...+++..+..|+.||+.||+|||+.+ |+||||||+|||++.++.
T Consensus 85 ~--~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~~--ivH~Dlkp~NIll~~~~~~~~~~~~~ 159 (289)
T 4fvq_A 85 D--ENILVQEFVKFGSLDTYLKKN-KNCINILWKLEVAKQLAAAMHFLEENT--LIHGNVCAKNILLIREEDRKTGNPPF 159 (289)
T ss_dssp T--CCEEEEECCTTCBHHHHHHHT-GGGCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEEEECCBGGGTBCCE
T ss_pred C--CCEEEEECCCCCCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHhhCC--eECCCcCcceEEEecCCcccccccce
Confidence 6 569999999999999999643 334899999999999999999999998 999999999999998887
Q ss_pred EEEeccCCCCCCCC-----CCccccchhhccc-CCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCC
Q 004979 573 AKISDFSFWNNTTA-----AKTGSAAMELLET-SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPL 646 (721)
Q Consensus 573 ~kL~DFGla~~~~~-----~~~~~~apE~~~~-~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~ 646 (721)
+||+|||++..... ++..|+|||.+.+ ..++.++|||||||++|||+||..|+.... ....... ........
T Consensus 160 ~kl~Dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~-~~~~~~~-~~~~~~~~ 237 (289)
T 4fvq_A 160 IKLSDPGISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSAL-DSQRKLQ-FYEDRHQL 237 (289)
T ss_dssp EEECCCCSCTTTSCHHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTS-CHHHHHH-HHHTTCCC
T ss_pred eeeccCcccccccCccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCcccc-chHHHHH-HhhccCCC
Confidence 99999999865433 3457999999977 779999999999999999999655543222 2222111 11111111
Q ss_pred ccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhc
Q 004979 647 KDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAM 696 (721)
Q Consensus 647 ~~~~d~~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~i~~~ 696 (721)
. ...+.++.+++.+||+.||++|||+.|+++.|+++...
T Consensus 238 ~-----------~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p 276 (289)
T 4fvq_A 238 P-----------APKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTP 276 (289)
T ss_dssp C-----------CCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC--
T ss_pred C-----------CCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCC
Confidence 1 11234578899999999999999999999999987664
No 128
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=1.8e-38 Score=332.14 Aligned_cols=245 Identities=21% Similarity=0.346 Sum_probs=202.5
Q ss_pred hhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEEEE
Q 004979 430 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 508 (721)
Q Consensus 430 ~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~lV 508 (721)
++.+.+|+|+||+||+|+.. ++..||+|++.... ...+.+.+|++++++++||||+++++++.+.+ ..++|
T Consensus 16 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~~v 87 (288)
T 3kfa_A 16 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT------MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP--PFYII 87 (288)
T ss_dssp EEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS------THHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--SEEEE
T ss_pred eEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH------HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCC--CEEEE
Confidence 67788999999999999976 47789999886432 23467999999999999999999999998776 57999
Q ss_pred EecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCCCCC-
Q 004979 509 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAA- 587 (721)
Q Consensus 509 ~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~~~~- 587 (721)
|||+++|+|.+++.......+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 88 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 165 (288)
T 3kfa_A 88 TEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 165 (288)
T ss_dssp EECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHT--CCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSS
T ss_pred EEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCC--ccCCCCCcceEEEcCCCCEEEccCccceeccCCc
Confidence 99999999999997656677999999999999999999999988 999999999999999999999999988644321
Q ss_pred ---------CccccchhhcccCCCCCCccHHHHHHHHHHHHh-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccc
Q 004979 588 ---------KTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSF 657 (721)
Q Consensus 588 ---------~~~~~apE~~~~~~~s~ksDVwSfGvvL~Ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 657 (721)
+..|+|||.+....++.++||||||+++|||++ |+.||..... .......... .. ...
T Consensus 166 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~--~~~~~~~~~~-~~---------~~~ 233 (288)
T 3kfa_A 166 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL--SQVYELLEKD-YR---------MER 233 (288)
T ss_dssp SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG--GGHHHHHHTT-CC---------CCC
T ss_pred cccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHhcc-CC---------CCC
Confidence 235899999998999999999999999999999 9999964332 2222222211 11 011
Q ss_pred cHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhc
Q 004979 658 QENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAM 696 (721)
Q Consensus 658 ~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~i~~~ 696 (721)
+..++.++.+++.+||+.||++||++.|+++.|+++...
T Consensus 234 ~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~ 272 (288)
T 3kfa_A 234 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 272 (288)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHh
Confidence 234457789999999999999999999999999987654
No 129
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=4.6e-38 Score=336.82 Aligned_cols=259 Identities=23% Similarity=0.340 Sum_probs=190.1
Q ss_pred hhhCcCCCCceeEEEEEEecCCcEEEEEEeeeccccchhhHHHHHHHHH--HHHHhcCCCCccceEeEEEec---CCCce
Q 004979 430 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKK--IDTLSKVNHKNFVNLIGYCEE---DEPFT 504 (721)
Q Consensus 430 ~ii~~lg~G~~g~Vyk~~~~~~~~vavk~~~~~~~~~~~~~~~~~f~~E--i~~l~~l~H~nIv~l~g~~~~---~~~~~ 504 (721)
++++.+|+|+||+||+|+. ++..||||++..... ..+..| +..+..++||||+++++++.. .+...
T Consensus 16 ~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~--------~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 86 (336)
T 3g2f_A 16 KLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANR--------QNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRME 86 (336)
T ss_dssp EEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGGH--------HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEE
T ss_pred heeeecccCCCeEEEEEEE-CCeEEEEEEeeccch--------hhHHHHHHHHHHHhccCcchhhheecccccccCCCce
Confidence 6778899999999999987 578999998864321 233344 444556899999999986542 22235
Q ss_pred EEEEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcC-------CCCeEeeCCCCCCeEeCCCCcEEEec
Q 004979 505 RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQL-------TPPIAHRNLQSSSIYLTEDYAAKISD 577 (721)
Q Consensus 505 ~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~-------~~~IvHrDLKp~NILl~~~~~~kL~D 577 (721)
.++||||+++|+|.+++.. ...++..+..|+.||+.||+|||+. .++|+||||||+|||++.++.+||+|
T Consensus 87 ~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~D 163 (336)
T 3g2f_A 87 YLLVMEYYPNGSLXKYLSL---HTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISD 163 (336)
T ss_dssp EEEEECCCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECC
T ss_pred EEEEEecCCCCcHHHHHhh---cccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEee
Confidence 6899999999999999964 3358999999999999999999998 11399999999999999999999999
Q ss_pred cCCCCCCC-----------------CCCccccchhhccc-------CCCCCCccHHHHHHHHHHHHhCCCcccCCCCC--
Q 004979 578 FSFWNNTT-----------------AAKTGSAAMELLET-------SAVDLESNVYSFGTILFEMITGRISYSIENGS-- 631 (721)
Q Consensus 578 FGla~~~~-----------------~~~~~~~apE~~~~-------~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~-- 631 (721)
||+++... .++..|+|||.+.+ ..++.++|||||||++|||+||+.||......
T Consensus 164 FG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~ 243 (336)
T 3g2f_A 164 FGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPE 243 (336)
T ss_dssp CTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCC
T ss_pred ccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhH
Confidence 99985321 25568999999876 45678899999999999999998776422110
Q ss_pred -------------HHHHHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCC
Q 004979 632 -------------LENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEP 698 (721)
Q Consensus 632 -------------~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 698 (721)
..+........... ...+.. .......++.++.+++.+||+.||++|||+.|+++.|+++.....
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~ 321 (336)
T 3g2f_A 244 YQMAFQTEVGNHPTFEDMQVLVSREKQ-RPKFPE-AWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWE 321 (336)
T ss_dssp CCCTTHHHHCSSCCHHHHHHHHTTSCC-CCCCCT-TCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCC
T ss_pred HHHhhhcccCCCchHHHHHhhhccccc-CCCCCc-ccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHHH
Confidence 00011111111110 000000 111123467789999999999999999999999999999987665
Q ss_pred CCCC
Q 004979 699 DGAT 702 (721)
Q Consensus 699 ~~~~ 702 (721)
....
T Consensus 322 ~~~~ 325 (336)
T 3g2f_A 322 RNKS 325 (336)
T ss_dssp C---
T ss_pred hccc
Confidence 4443
No 130
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.7e-38 Score=330.08 Aligned_cols=247 Identities=18% Similarity=0.290 Sum_probs=201.1
Q ss_pred hhhC-cCCCCceeEEEEEEec---CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceE
Q 004979 430 NIIG-SFSDGTVGTVYKGTLS---SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTR 505 (721)
Q Consensus 430 ~ii~-~lg~G~~g~Vyk~~~~---~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~ 505 (721)
.+++ .+|+|+||+||+|++. ++..||||++.... .....+.+.+|++++++++||||+++++++.. + ..
T Consensus 12 ~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~--~~ 84 (287)
T 1u59_A 12 LIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT----EKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-E--AL 84 (287)
T ss_dssp EEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSC----CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-S--SE
T ss_pred hhhhccccccCceeEEEeEeccCCCcceEEEEecCCcc----chhHHHHHHHHHHHHHhCCCCCEeEEEEEecC-C--Cc
Confidence 4555 7899999999999854 57789999886432 23345679999999999999999999999954 3 46
Q ss_pred EEEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCCC
Q 004979 506 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT 585 (721)
Q Consensus 506 ~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~~ 585 (721)
++||||+++|+|.+++.. ....+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 85 ~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~ 161 (287)
T 1u59_A 85 MLVMEMAGGGPLHKFLVG-KREEIPVSNVAELLHQVSMGMKYLEEKN--FVHRDLAARNVLLVNRHYAKISDFGLSKALG 161 (287)
T ss_dssp EEEEECCTTEEHHHHHTT-CTTTSCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEEEETTEEEECCCTTCEECT
T ss_pred EEEEEeCCCCCHHHHHHh-CCccCCHHHHHHHHHHHHHHHHHHHHCC--EeeCCCchheEEEcCCCCEEECcccceeeec
Confidence 999999999999999863 3456999999999999999999999998 9999999999999999999999999875332
Q ss_pred ------------CCCccccchhhcccCCCCCCccHHHHHHHHHHHHh-CCCcccCCCCCHHHHHHHHhhcCCCCccccCC
Q 004979 586 ------------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDP 652 (721)
Q Consensus 586 ------------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~Ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 652 (721)
.++..|+|||.+....++.++|||||||++|||+| |+.||.... ..+.......+..
T Consensus 162 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~--~~~~~~~i~~~~~-------- 231 (287)
T 1u59_A 162 ADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMK--GPEVMAFIEQGKR-------- 231 (287)
T ss_dssp TCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCC--THHHHHHHHTTCC--------
T ss_pred cCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCC--HHHHHHHHhcCCc--------
Confidence 12346899999988889999999999999999999 999996433 2333333322211
Q ss_pred ccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCC
Q 004979 653 TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEP 698 (721)
Q Consensus 653 ~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 698 (721)
...+..++.++.+++.+||+.||++||++.|+++.|+++.....
T Consensus 232 --~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~ 275 (287)
T 1u59_A 232 --MECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLA 275 (287)
T ss_dssp --CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred --CCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcC
Confidence 11223456789999999999999999999999999999876543
No 131
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=5.5e-38 Score=351.24 Aligned_cols=239 Identities=21% Similarity=0.346 Sum_probs=197.8
Q ss_pred hhhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEEE
Q 004979 429 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 507 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~l 507 (721)
+.+.+.+|+|+||.||+|+.. +++.||||++....... ......+.+|+++++.++||||+++++++...+ ..++
T Consensus 18 Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~--~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~--~~~l 93 (476)
T 2y94_A 18 YILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRS--LDVVGKIRREIQNLKLFRHPHIIKLYQVISTPS--DIFM 93 (476)
T ss_dssp EEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHH--TTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEE
T ss_pred EEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccC--HHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC--EEEE
Confidence 467788999999999999975 78999999986432211 123457899999999999999999999998876 6799
Q ss_pred EEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCC---
Q 004979 508 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT--- 584 (721)
Q Consensus 508 V~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~--- 584 (721)
||||+++|+|.+++. ....+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 94 v~E~~~gg~L~~~l~--~~~~l~~~~~~~i~~qi~~aL~~LH~~g--ivHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~ 169 (476)
T 2y94_A 94 VMEYVSGGELFDYIC--KNGRLDEKESRRLFQQILSGVDYCHRHM--VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG 169 (476)
T ss_dssp EEECCSSEEHHHHTT--SSSSCCHHHHHHHHHHHHHHHHHHHTTT--EECSCCSGGGEEECTTCCEEECCCSSCEECCTT
T ss_pred EEeCCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC--CCcccccHHHEEEecCCCeEEEeccchhhcccc
Confidence 999999999999986 3456999999999999999999999998 999999999999999999999999997532
Q ss_pred -----CCCCccccchhhcccCCC-CCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004979 585 -----TAAKTGSAAMELLETSAV-DLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 658 (721)
Q Consensus 585 -----~~~~~~~~apE~~~~~~~-s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 658 (721)
..++..|+|||.+.+..+ +.++||||+||++|||++|+.||... +.......+..+.... +
T Consensus 170 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~--~~~~~~~~i~~~~~~~-----------p 236 (476)
T 2y94_A 170 EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDD--HVPTLFKKICDGIFYT-----------P 236 (476)
T ss_dssp CCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCS--SSHHHHHHHHTTCCCC-----------C
T ss_pred ccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCC--CHHHHHHHHhcCCcCC-----------C
Confidence 234567999999987765 68999999999999999999999643 3334444444332211 1
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004979 659 ENVLEELLVVIKNCVHPDPKQRPSMRGIAA 688 (721)
Q Consensus 659 ~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 688 (721)
...+.++.+|+.+||+.||++|||+.|+++
T Consensus 237 ~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~ 266 (476)
T 2y94_A 237 QYLNPSVISLLKHMLQVDPMKRATIKDIRE 266 (476)
T ss_dssp TTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccCCHHHHHHHHHHcCCCchhCcCHHHHHh
Confidence 233467889999999999999999999987
No 132
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=3.8e-38 Score=334.57 Aligned_cols=253 Identities=19% Similarity=0.318 Sum_probs=199.1
Q ss_pred hhhhCcCCCCceeEEEEEEe-cCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecC--CCceE
Q 004979 429 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEED--EPFTR 505 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~-~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~--~~~~~ 505 (721)
+++++.+|+|+||.||+++. .+++.||||++.... ....+.+.+|++++++++||||+++++++... .....
T Consensus 31 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 105 (317)
T 2buj_A 31 YLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHE-----QQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEA 105 (317)
T ss_dssp EEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESS-----HHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEE
T ss_pred EEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCC-----HHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCcee
Confidence 36778899999999999996 578899999886432 23456789999999999999999999998732 22357
Q ss_pred EEEEecCCCCChhhhhhhc--cCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCC
Q 004979 506 MMVFEYSPNGSLFEHLHIQ--EAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN 583 (721)
Q Consensus 506 ~lV~Ey~~~GsL~~~l~~~--~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~ 583 (721)
++||||+++|+|.+++... ....+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++.
T Consensus 106 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~--ivH~dlkp~NIl~~~~~~~kl~dfg~~~~ 183 (317)
T 2buj_A 106 WLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKG--YAHRDLKPTNILLGDEGQPVLMDLGSMNQ 183 (317)
T ss_dssp EEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECTTSCEEECCCSSCEE
T ss_pred EEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHEEEcCCCCEEEEecCcchh
Confidence 9999999999999998643 3467999999999999999999999998 99999999999999999999999998764
Q ss_pred CCC------------------CCccccchhhcccCC---CCCCccHHHHHHHHHHHHhCCCcccCC---CCCHHHHHHHH
Q 004979 584 TTA------------------AKTGSAAMELLETSA---VDLESNVYSFGTILFEMITGRISYSIE---NGSLENWASEY 639 (721)
Q Consensus 584 ~~~------------------~~~~~~apE~~~~~~---~s~ksDVwSfGvvL~ElltG~~P~~~~---~~~~~~~~~~~ 639 (721)
... ++..|+|||.+.... ++.++|||||||++|||+||+.||... ........
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~--- 260 (317)
T 2buj_A 184 ACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAV--- 260 (317)
T ss_dssp SCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHH---
T ss_pred cccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHh---
Confidence 321 255699999986543 689999999999999999999999531 11111111
Q ss_pred hhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCCCCC
Q 004979 640 LKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPDGA 701 (721)
Q Consensus 640 ~~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~~ 701 (721)
...... ......+.++.+++.+||+.||++||++.|+++.|+.+....+.+.
T Consensus 261 -~~~~~~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~~~~~ 312 (317)
T 2buj_A 261 -QNQLSI---------PQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPAPGQH 312 (317)
T ss_dssp -HCC--C---------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCCCCC--
T ss_pred -hccCCC---------CccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCCCCCCC
Confidence 111100 0112345678999999999999999999999999999887666543
No 133
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=1.5e-38 Score=340.28 Aligned_cols=248 Identities=20% Similarity=0.319 Sum_probs=198.8
Q ss_pred hhhCcCCCCceeEEEEEEecC-C-----cEEEEEEeeeccccchhhHHHHHHHHHHHHHhcC-CCCccceEeEEEecCCC
Q 004979 430 NIIGSFSDGTVGTVYKGTLSS-G-----VEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEP 502 (721)
Q Consensus 430 ~ii~~lg~G~~g~Vyk~~~~~-~-----~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l-~H~nIv~l~g~~~~~~~ 502 (721)
++.+.+|+|+||+||+|+... + ..|++|.+.... .....+.+.+|+++++++ +||||+++++++.+.+
T Consensus 49 ~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~- 123 (333)
T 2i1m_A 49 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTA----HADEKEALMSELKIMSHLGQHENIVNLLGACTHGG- 123 (333)
T ss_dssp EEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-
T ss_pred eeeeEeccCCCcceEEEEecCCCcccchhHHHHHhccccc----ChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCC-
Confidence 667889999999999998643 2 468998876432 123456799999999999 8999999999998876
Q ss_pred ceEEEEEecCCCCChhhhhhhcc------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCC
Q 004979 503 FTRMMVFEYSPNGSLFEHLHIQE------------AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTED 570 (721)
Q Consensus 503 ~~~~lV~Ey~~~GsL~~~l~~~~------------~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~ 570 (721)
..++||||+++|+|.+++.... ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.+
T Consensus 124 -~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~Dlkp~NIl~~~~ 200 (333)
T 2i1m_A 124 -PVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKN--CIHRDVAARNVLLTNG 200 (333)
T ss_dssp -SCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGCEEEGG
T ss_pred -ceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCC--cccCCcccceEEECCC
Confidence 5699999999999999986432 345899999999999999999999988 9999999999999999
Q ss_pred CcEEEeccCCCCCCCC-----------CCccccchhhcccCCCCCCccHHHHHHHHHHHHh-CCCcccCCCCCHHHHHHH
Q 004979 571 YAAKISDFSFWNNTTA-----------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASE 638 (721)
Q Consensus 571 ~~~kL~DFGla~~~~~-----------~~~~~~apE~~~~~~~s~ksDVwSfGvvL~Ellt-G~~P~~~~~~~~~~~~~~ 638 (721)
+.+||+|||+++.... ++..|+|||.+.+..++.++|||||||++|||+| |+.||....... ....
T Consensus 201 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~--~~~~ 278 (333)
T 2i1m_A 201 HVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS--KFYK 278 (333)
T ss_dssp GEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSH--HHHH
T ss_pred CeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhH--HHHH
Confidence 9999999999864321 1236999999998999999999999999999999 999996443221 1222
Q ss_pred HhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhc
Q 004979 639 YLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAM 696 (721)
Q Consensus 639 ~~~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~i~~~ 696 (721)
........ ..+...+.++.+++.+||+.||++||++.||++.|+++...
T Consensus 279 ~~~~~~~~---------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~ 327 (333)
T 2i1m_A 279 LVKDGYQM---------AQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQE 327 (333)
T ss_dssp HHHHTCCC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHhcCCCC---------CCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHh
Confidence 22221111 01122346788999999999999999999999999987653
No 134
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=2.9e-38 Score=337.38 Aligned_cols=253 Identities=21% Similarity=0.283 Sum_probs=199.4
Q ss_pred hhhhCcCCCCceeEEEEEEe-----cCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCc
Q 004979 429 SNIIGSFSDGTVGTVYKGTL-----SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPF 503 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~-----~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~ 503 (721)
+++++.+|+|+||.||+|++ .++..||||++.... ....+.+.+|++++++++||||+++++++...+..
T Consensus 25 y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 99 (327)
T 3lxl_A 25 LKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG-----PDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQ 99 (327)
T ss_dssp EEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCC-----HHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSC
T ss_pred hhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCC-----HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCc
Confidence 36788999999999999984 367889999886432 23346799999999999999999999998865444
Q ss_pred eEEEEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCC
Q 004979 504 TRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN 583 (721)
Q Consensus 504 ~~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~ 583 (721)
..++||||+++|+|.+++... ...+++..+..|+.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 100 ~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~~--ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~ 176 (327)
T 3lxl_A 100 SLRLVMEYLPSGCLRDFLQRH-RARLDASRLLLYSSQICKGMEYLGSRR--CVHRDLAARNILVESEAHVKIADFGLAKL 176 (327)
T ss_dssp EEEEEEECCTTCBHHHHHHHH-GGGCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEEEETTEEEECCGGGCEE
T ss_pred eEEEEEeecCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhCC--ccCCCCChhhEEECCCCCEEEccccccee
Confidence 689999999999999998643 245899999999999999999999988 99999999999999999999999998753
Q ss_pred CC------------CCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCH------------HHHHHHH
Q 004979 584 TT------------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSL------------ENWASEY 639 (721)
Q Consensus 584 ~~------------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~------------~~~~~~~ 639 (721)
.. .++..|+|||.+.+..++.++|||||||++|||+||+.||....... .......
T Consensus 177 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (327)
T 3lxl_A 177 LPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLEL 256 (327)
T ss_dssp CCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHH
T ss_pred cccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHH
Confidence 22 12334899999988889999999999999999999999985321100 0011111
Q ss_pred hhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCC
Q 004979 640 LKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEP 698 (721)
Q Consensus 640 ~~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 698 (721)
..... ....+..++.++.+++.+||+.||++||++.|+++.|+.+.....
T Consensus 257 ~~~~~---------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~ 306 (327)
T 3lxl_A 257 LEEGQ---------RLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSR 306 (327)
T ss_dssp HHTTC---------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC-----
T ss_pred hhccc---------CCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhc
Confidence 11100 111233456789999999999999999999999999999866544
No 135
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.3e-37 Score=329.64 Aligned_cols=252 Identities=17% Similarity=0.214 Sum_probs=197.8
Q ss_pred hhhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEEE
Q 004979 429 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 507 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~l 507 (721)
+++.+.+|+|+||.||+|+.. +++.|++|++...... .....+.+.+|++++++++||||+++++++...+ ..++
T Consensus 36 y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~--~~~l 111 (309)
T 2h34_A 36 YRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSS--DPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDG--QLYV 111 (309)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGG--SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETT--EEEE
T ss_pred EEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCccccc--CHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCC--eEEE
Confidence 367788999999999999965 6788999988643322 2334578999999999999999999999998876 6799
Q ss_pred EEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCCC--
Q 004979 508 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT-- 585 (721)
Q Consensus 508 V~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~~-- 585 (721)
||||+++++|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++....
T Consensus 112 v~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~--i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 187 (309)
T 2h34_A 112 DMRLINGVDLAAMLRRQ--GPLAPPRAVAIVRQIGSALDAAHAAG--ATHRDVKPENILVSADDFAYLVDFGIASATTDE 187 (309)
T ss_dssp EEECCCCEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECTTSCEEECSCCC-------
T ss_pred EEEecCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCc--CCcCCCChHHEEEcCCCCEEEecCccCcccccc
Confidence 99999999999998643 46899999999999999999999998 9999999999999999999999999875332
Q ss_pred --------CCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccc
Q 004979 586 --------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSF 657 (721)
Q Consensus 586 --------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 657 (721)
.++..|+|||.+.+..++.++||||||+++|||+||+.||.... ............+.. ...
T Consensus 188 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~---~~~~~~~~~~~~~~~-------~~~ 257 (309)
T 2h34_A 188 KLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQ---LSVMGAHINQAIPRP-------STV 257 (309)
T ss_dssp ---------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCH---HHHHHHHHHSCCCCG-------GGT
T ss_pred ccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCch---HHHHHHHhccCCCCc-------ccc
Confidence 23457899999999999999999999999999999999996432 122222222221111 112
Q ss_pred cHHHHHHHHHHHHHcccCCCCCCC-CHHHHHHHHHHhhhcCC
Q 004979 658 QENVLEELLVVIKNCVHPDPKQRP-SMRGIAAKLKEITAMEP 698 (721)
Q Consensus 658 ~~~~~~~l~~li~~Cl~~dP~~RP-s~~evl~~L~~i~~~~~ 698 (721)
...++.++.+++.+||+.||++|| +++++++.|+++.....
T Consensus 258 ~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~~ 299 (309)
T 2h34_A 258 RPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATAD 299 (309)
T ss_dssp STTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC---
T ss_pred CCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhhc
Confidence 234556788999999999999999 99999999998765543
No 136
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=3.3e-38 Score=335.80 Aligned_cols=247 Identities=21% Similarity=0.331 Sum_probs=200.8
Q ss_pred hhhhCcCCCCceeEEEEEEec------CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCC
Q 004979 429 SNIIGSFSDGTVGTVYKGTLS------SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEP 502 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~~------~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~ 502 (721)
+++.+.+|+|+||.||+|+.. ++..||+|++.... .......+.+|++++++++||||+++++++.+.+
T Consensus 27 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 101 (322)
T 1p4o_A 27 ITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA----SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQ- 101 (322)
T ss_dssp EEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTS----CHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSS-
T ss_pred eeeeeEeccCCceEEEeeeecCccCCCCceEEEEEeccccc----CHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCC-
Confidence 367788999999999999864 36779999876332 1233467999999999999999999999998776
Q ss_pred ceEEEEEecCCCCChhhhhhhcc--------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEE
Q 004979 503 FTRMMVFEYSPNGSLFEHLHIQE--------AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAK 574 (721)
Q Consensus 503 ~~~~lV~Ey~~~GsL~~~l~~~~--------~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~k 574 (721)
..++||||+++|+|.+++.... ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+|
T Consensus 102 -~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--i~H~dikp~NIli~~~~~~k 178 (322)
T 1p4o_A 102 -PTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMVAEDFTVK 178 (322)
T ss_dssp -SCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTT--CBCSCCSGGGEEECTTCCEE
T ss_pred -ccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCC--CccCCCccceEEEcCCCeEE
Confidence 5699999999999999986432 145799999999999999999999998 99999999999999999999
Q ss_pred EeccCCCCCCCC-----------CCccccchhhcccCCCCCCccHHHHHHHHHHHHh-CCCcccCCCCCHHHHHHHHhhc
Q 004979 575 ISDFSFWNNTTA-----------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKG 642 (721)
Q Consensus 575 L~DFGla~~~~~-----------~~~~~~apE~~~~~~~s~ksDVwSfGvvL~Ellt-G~~P~~~~~~~~~~~~~~~~~~ 642 (721)
|+|||+++.... ++..|+|||.+.+..++.++|||||||++|||+| |+.||... ...+.......+
T Consensus 179 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~--~~~~~~~~~~~~ 256 (322)
T 1p4o_A 179 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL--SNEQVLRFVMEG 256 (322)
T ss_dssp ECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTS--CHHHHHHHHHTT
T ss_pred ECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccC--CHHHHHHHHHcC
Confidence 999999864321 2345899999998999999999999999999999 88998533 333333333322
Q ss_pred CCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhh
Q 004979 643 EQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITA 695 (721)
Q Consensus 643 ~~~~~~~~d~~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~i~~ 695 (721)
.. ...+..++.++.+++.+||+.||++||++.|+++.|+++..
T Consensus 257 ~~----------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~ 299 (322)
T 1p4o_A 257 GL----------LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 299 (322)
T ss_dssp CC----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred Cc----------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence 11 11223455678999999999999999999999999988644
No 137
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=4.4e-38 Score=328.24 Aligned_cols=243 Identities=17% Similarity=0.292 Sum_probs=197.5
Q ss_pred hhhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecC-------
Q 004979 429 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEED------- 500 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~------- 500 (721)
+++++.+|+|+||.||+|+.. +++.|++|++.... +.+.+|++++++++||||+++++++...
T Consensus 13 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---------~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 83 (284)
T 2a19_B 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN---------EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETS 83 (284)
T ss_dssp EEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS---------GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC----
T ss_pred cceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc---------HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccc
Confidence 367788999999999999975 78999999886432 2467899999999999999999988541
Q ss_pred -------CCceEEEEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcE
Q 004979 501 -------EPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAA 573 (721)
Q Consensus 501 -------~~~~~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~ 573 (721)
.....++||||+++|+|.+++.......+++..+..++.|++.||+|||+.+ |+||||||+|||+++++.+
T Consensus 84 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--i~H~dlkp~Nil~~~~~~~ 161 (284)
T 2a19_B 84 SKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKK--LINRDLKPSNIFLVDTKQV 161 (284)
T ss_dssp -----CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEEEETTEE
T ss_pred cccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeeccCCHHHEEEcCCCCE
Confidence 1224799999999999999997655567999999999999999999999998 9999999999999999999
Q ss_pred EEeccCCCCCC--------CCCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCC
Q 004979 574 KISDFSFWNNT--------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQP 645 (721)
Q Consensus 574 kL~DFGla~~~--------~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~ 645 (721)
||+|||+++.. ..++..|+|||.+.+..++.++|||||||++|||+||..|+... .........+ .
T Consensus 162 kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~----~~~~~~~~~~--~ 235 (284)
T 2a19_B 162 KIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET----SKFFTDLRDG--I 235 (284)
T ss_dssp EECCCTTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH----HHHHHHHHTT--C
T ss_pred EECcchhheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH----HHHHHHhhcc--c
Confidence 99999987532 22456799999999999999999999999999999999887421 1222222111 1
Q ss_pred CccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCCC
Q 004979 646 LKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPD 699 (721)
Q Consensus 646 ~~~~~d~~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~ 699 (721)
. +...+.++.+++.+||+.||++||++.|+++.|..+......
T Consensus 236 ~-----------~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~~ 278 (284)
T 2a19_B 236 I-----------SDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPEK 278 (284)
T ss_dssp C-----------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC----
T ss_pred c-----------cccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCCc
Confidence 1 122345688999999999999999999999999998775543
No 138
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=1.3e-37 Score=330.27 Aligned_cols=242 Identities=22% Similarity=0.325 Sum_probs=190.6
Q ss_pred hhhh-CcCCCCceeEEEEEEe-cCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcC-CCCccceEeEEEecCCCceE
Q 004979 429 SNII-GSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPFTR 505 (721)
Q Consensus 429 ~~ii-~~lg~G~~g~Vyk~~~-~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l-~H~nIv~l~g~~~~~~~~~~ 505 (721)
|+++ +.+|+|+||+||+|+. .+++.||||++..... .....+.+|++++.++ +||||+++++++.+.+ ..
T Consensus 14 y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~--~~ 86 (316)
T 2ac3_A 14 YQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPG-----HIRSRVFREVEMLYQCQGHRNVLELIEFFEEED--RF 86 (316)
T ss_dssp CEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSS-----CCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT--EE
T ss_pred EEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcc-----hhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCC--EE
Confidence 4554 5689999999999995 4788999999865422 1235788999999985 7999999999998877 67
Q ss_pred EEEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCc---EEEeccCCCC
Q 004979 506 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYA---AKISDFSFWN 582 (721)
Q Consensus 506 ~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~---~kL~DFGla~ 582 (721)
++||||+++|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++. +||+|||+++
T Consensus 87 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~--ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~ 162 (316)
T 2ac3_A 87 YLVFEKMRGGSILSHIHKR--RHFNELEASVVVQDVASALDFLHNKG--IAHRDLKPENILCEHPNQVSPVKICDFDLGS 162 (316)
T ss_dssp EEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEESCSSSSCSEEECCTTCCC
T ss_pred EEEEEcCCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhCC--ceeCCCCHHHEEEccCCCcCceEEEEccCcc
Confidence 9999999999999998643 46899999999999999999999998 999999999999998776 9999999875
Q ss_pred CCC----------------CCCccccchhhccc-----CCCCCCccHHHHHHHHHHHHhCCCcccCCCCC----------
Q 004979 583 NTT----------------AAKTGSAAMELLET-----SAVDLESNVYSFGTILFEMITGRISYSIENGS---------- 631 (721)
Q Consensus 583 ~~~----------------~~~~~~~apE~~~~-----~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~---------- 631 (721)
... .++..|+|||.+.. ..++.++|||||||++|||+||+.||......
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~ 242 (316)
T 2ac3_A 163 GIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEAC 242 (316)
T ss_dssp -------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CC
T ss_pred ccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccc
Confidence 321 25567999999864 56889999999999999999999999744321
Q ss_pred ---HHHHHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004979 632 ---LENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 688 (721)
Q Consensus 632 ---~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 688 (721)
.......+..+...... ......+.++.+|+.+||+.||++|||+.|+++
T Consensus 243 ~~~~~~~~~~i~~~~~~~~~-------~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 295 (316)
T 2ac3_A 243 PACQNMLFESIQEGKYEFPD-------KDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQ 295 (316)
T ss_dssp HHHHHHHHHHHHHCCCCCCH-------HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred hhHHHHHHHHHhccCcccCc-------hhcccCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 11122222222111100 001124567899999999999999999999987
No 139
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=6.5e-38 Score=339.20 Aligned_cols=247 Identities=20% Similarity=0.242 Sum_probs=193.3
Q ss_pred hhhhCcCCCCceeEEEEEEe-cCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCC-----CCccceEeEEEecCCC
Q 004979 429 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN-----HKNFVNLIGYCEEDEP 502 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~-~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~-----H~nIv~l~g~~~~~~~ 502 (721)
+++++.+|+|+||+||+|+. .++..||||++... ....+.+..|++++.+++ |||||++++++...+
T Consensus 37 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~------~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~- 109 (360)
T 3llt_A 37 FLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI------KKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYD- 109 (360)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC------HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETT-
T ss_pred EEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc------hhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECC-
Confidence 47888999999999999996 46888999988532 223456788999999886 999999999998877
Q ss_pred ceEEEEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCC-------------
Q 004979 503 FTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTE------------- 569 (721)
Q Consensus 503 ~~~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~------------- 569 (721)
..++||||+ +|+|.+++.......+++..+..|+.||+.||+|||+++ |+||||||+|||++.
T Consensus 110 -~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlkp~NIll~~~~~~~~~~~~~~~ 185 (360)
T 3llt_A 110 -HMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMS--LTHTDLKPENILLDDPYFEKSLITVRRV 185 (360)
T ss_dssp -EEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEESCTTCCEEEEEEECT
T ss_pred -eeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeeCCCCcccEEEccccccccccchhcc
Confidence 679999999 999999997655567999999999999999999999998 999999999999986
Q ss_pred ------------CCcEEEeccCCCCCC------CCCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCCCC
Q 004979 570 ------------DYAAKISDFSFWNNT------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGS 631 (721)
Q Consensus 570 ------------~~~~kL~DFGla~~~------~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~ 631 (721)
++.+||+|||+++.. ..++..|+|||.+.+..++.++|||||||++|||+||+.||....
T Consensus 186 ~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-- 263 (360)
T 3llt_A 186 TDGKKIQIYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHE-- 263 (360)
T ss_dssp TTCCEEEEEEESCCCEEECCCTTCEETTSCCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCSS--
T ss_pred cccccccccccCCCCEEEEeccCceecCCCCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCCc--
Confidence 789999999998632 234567999999999999999999999999999999999996432
Q ss_pred HHHHHHHHhhcCCCCcc-------------ccC--------Ccc--------------ccccHHHHHHHHHHHHHcccCC
Q 004979 632 LENWASEYLKGEQPLKD-------------IVD--------PTL--------------KSFQENVLEELLVVIKNCVHPD 676 (721)
Q Consensus 632 ~~~~~~~~~~~~~~~~~-------------~~d--------~~l--------------~~~~~~~~~~l~~li~~Cl~~d 676 (721)
..+....+.....+... ..+ +.. ........+.+.+|+.+||+.|
T Consensus 264 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d 343 (360)
T 3llt_A 264 HMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQID 343 (360)
T ss_dssp HHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSS
T ss_pred HHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhcCC
Confidence 22222211111111100 000 000 0000111256889999999999
Q ss_pred CCCCCCHHHHHH
Q 004979 677 PKQRPSMRGIAA 688 (721)
Q Consensus 677 P~~RPs~~evl~ 688 (721)
|++|||+.|+++
T Consensus 344 P~~Rpta~elL~ 355 (360)
T 3llt_A 344 PTLRPSPAELLK 355 (360)
T ss_dssp GGGSCCHHHHTT
T ss_pred hhhCCCHHHHhc
Confidence 999999999874
No 140
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=4.7e-38 Score=351.82 Aligned_cols=253 Identities=14% Similarity=0.153 Sum_probs=181.0
Q ss_pred hhhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCC---Cce
Q 004979 429 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDE---PFT 504 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~---~~~ 504 (721)
+++++.||+|+||+||+|+.. ++..||||++..... .....+++.+|+++|++++|||||++++++...+ ...
T Consensus 55 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 55 YEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFE---DLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp EEECCC-------CEEEEEECC--CEEEEEEECSTTS---SHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred eEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhc---CHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 478889999999999999854 688999998854321 1234567999999999999999999999986432 125
Q ss_pred EEEEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCC
Q 004979 505 RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT 584 (721)
Q Consensus 505 ~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~ 584 (721)
.|+||||+ +|+|.+++. ....+++..+..|+.||+.||+|||+.+ ||||||||+|||++.++.+||+|||+++..
T Consensus 132 ~~lv~e~~-~~~L~~~~~--~~~~l~~~~~~~~~~qi~~aL~~LH~~~--iiHrDlKp~NILl~~~~~~kl~DFGla~~~ 206 (458)
T 3rp9_A 132 LYVVLEIA-DSDFKKLFR--TPVYLTELHIKTLLYNLLVGVKYVHSAG--ILHRDLKPANCLVNQDCSVKVCDFGLARTV 206 (458)
T ss_dssp EEEEECCC-SEEHHHHHH--SSCCCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCCGGGEEECTTCCEEECCCTTCBCT
T ss_pred EEEEEecc-ccchhhhcc--cCCCCCHHHHHHHHHHHHHHHHHHHhCC--cCCCCCChhhEEECCCCCEeecccccchhc
Confidence 79999998 579999885 3456999999999999999999999998 999999999999999999999999998754
Q ss_pred C------------------------------------CCCccccchhhc-ccCCCCCCccHHHHHHHHHHHHh-------
Q 004979 585 T------------------------------------AAKTGSAAMELL-ETSAVDLESNVYSFGTILFEMIT------- 620 (721)
Q Consensus 585 ~------------------------------------~~~~~~~apE~~-~~~~~s~ksDVwSfGvvL~Ellt------- 620 (721)
. .++..|+|||++ ....|+.++|||||||++|||+|
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~~ 286 (458)
T 3rp9_A 207 DYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVA 286 (458)
T ss_dssp TSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCS
T ss_pred cCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhcccccc
Confidence 2 124569999976 56679999999999999999999
Q ss_pred ----CCCcccCCCCC------------------HHHHHHHHh--hcCCC------------------CccccCCcccccc
Q 004979 621 ----GRISYSIENGS------------------LENWASEYL--KGEQP------------------LKDIVDPTLKSFQ 658 (721)
Q Consensus 621 ----G~~P~~~~~~~------------------~~~~~~~~~--~~~~~------------------~~~~~d~~l~~~~ 658 (721)
|+.+|.+.... ....+..+. .+... +.......+....
T Consensus 287 ~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (458)
T 3rp9_A 287 YHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERF 366 (458)
T ss_dssp SGGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGGGS
T ss_pred ccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHHHC
Confidence 55555432210 000000000 00000 0000001111122
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004979 659 ENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 689 (721)
Q Consensus 659 ~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 689 (721)
+..+.++.+|+.+||+.||++|||++|+++.
T Consensus 367 ~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~H 397 (458)
T 3rp9_A 367 PASSADAIHLLKRMLVFNPNKRITINECLAH 397 (458)
T ss_dssp TTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred CCCCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 3446789999999999999999999999874
No 141
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=6.6e-38 Score=365.72 Aligned_cols=233 Identities=16% Similarity=0.218 Sum_probs=195.2
Q ss_pred hhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcC-CCCccceEeEEEecCCCceEEE
Q 004979 430 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPFTRMM 507 (721)
Q Consensus 430 ~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l-~H~nIv~l~g~~~~~~~~~~~l 507 (721)
+++..||+|+||+||+|+.. +++.||||++....... ....+.+..|.+++..+ +||||+++++++.+.+ ..|+
T Consensus 344 ~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~--~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~--~~~l 419 (674)
T 3pfq_A 344 NFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQ--DDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMD--RLYF 419 (674)
T ss_dssp EEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHH--TTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSS--EEEE
T ss_pred EEEEEEccCCCEEEEEEEECCCCcEEEEEEEecccccc--HHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCC--EEEE
Confidence 77889999999999999965 57889999987432211 22235688899999988 7999999999998776 6799
Q ss_pred EEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCC---
Q 004979 508 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT--- 584 (721)
Q Consensus 508 V~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~--- 584 (721)
||||+++|+|.++++.. ..+++..++.|+.||+.||+|||+.+ ||||||||+||||+.++.+||+|||+++..
T Consensus 420 V~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~g--IiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~ 495 (674)
T 3pfq_A 420 VMEYVNGGDLMYHIQQV--GRFKEPHAVFYAAEIAIGLFFLQSKG--IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD 495 (674)
T ss_dssp EEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTS--EECCCCCSTTEEECSSSCEEECCCTTCEECCCT
T ss_pred EEeCcCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC--eEeccCChhhEEEcCCCcEEEeecceeeccccC
Confidence 99999999999999743 46999999999999999999999998 999999999999999999999999998632
Q ss_pred ------CCCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004979 585 ------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 658 (721)
Q Consensus 585 ------~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 658 (721)
..++..|+|||++.+..|+.++|||||||++|||+||+.||.. .+..+....+...... ++
T Consensus 496 ~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~--~~~~~~~~~i~~~~~~-----------~p 562 (674)
T 3pfq_A 496 GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEG--EDEDELFQSIMEHNVA-----------YP 562 (674)
T ss_dssp TCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCC--SSHHHHHHHHHSSCCC-----------CC
T ss_pred CcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCC--CCHHHHHHHHHhCCCC-----------CC
Confidence 2356689999999999999999999999999999999999964 3445555555544322 22
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCH
Q 004979 659 ENVLEELLVVIKNCVHPDPKQRPSM 683 (721)
Q Consensus 659 ~~~~~~l~~li~~Cl~~dP~~RPs~ 683 (721)
...+.++.+|+.+||+.||++||++
T Consensus 563 ~~~s~~~~~li~~lL~~dP~~R~~~ 587 (674)
T 3pfq_A 563 KSMSKEAVAICKGLMTKHPGKRLGC 587 (674)
T ss_dssp TTSCHHHHHHHHHHSCSSSTTCTTC
T ss_pred ccCCHHHHHHHHHHccCCHHHCCCC
Confidence 3455789999999999999999997
No 142
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=3.5e-38 Score=365.60 Aligned_cols=240 Identities=21% Similarity=0.334 Sum_probs=196.5
Q ss_pred cCCCCceeEEEEEEec---CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEEEEEe
Q 004979 434 SFSDGTVGTVYKGTLS---SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFE 510 (721)
Q Consensus 434 ~lg~G~~g~Vyk~~~~---~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~lV~E 510 (721)
.||+|+||+||+|.+. .+..||||+++.... .....++|.+|+++|++++|||||+++++|... ..++|||
T Consensus 376 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~---~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~---~~~lv~E 449 (635)
T 4fl3_A 376 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAN---DPALKDELLAEANVMQQLDNPYIVRMIGICEAE---SWMLVME 449 (635)
T ss_dssp EEEECSSEEEEEEEEECSSCEEEEEEEEECGGGG---CGGGHHHHHHHHHHHHHCCCTTBCCEEEEEESS---SEEEEEE
T ss_pred EeccCCCEEEEEEEEcCCCcceEEEEEEeccccC---CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC---CEEEEEE
Confidence 6899999999999753 457899998864322 123356799999999999999999999999754 3689999
Q ss_pred cCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCCCC----
Q 004979 511 YSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA---- 586 (721)
Q Consensus 511 y~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~~~---- 586 (721)
||++|+|.+++.. ...+++..+..|+.||+.||+|||+.+ |+||||||+|||+++++.+||+|||+++....
T Consensus 450 ~~~~g~L~~~l~~--~~~l~~~~~~~i~~qi~~~L~yLH~~~--iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 525 (635)
T 4fl3_A 450 MAELGPLNKYLQQ--NRHVKDKNIIELVHQVSMGMKYLEESN--FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 525 (635)
T ss_dssp CCTTEEHHHHHHH--CTTCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEEEETTEEEECCTTHHHHTTC----
T ss_pred ccCCCCHHHHHhh--CCCCCHHHHHHHHHHHHHHHHHHHHCC--EeCCCCChHhEEEeCCCCEEEEEcCCccccccCccc
Confidence 9999999999963 456999999999999999999999998 99999999999999999999999998753211
Q ss_pred --------CCccccchhhcccCCCCCCccHHHHHHHHHHHHh-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccc
Q 004979 587 --------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSF 657 (721)
Q Consensus 587 --------~~~~~~apE~~~~~~~s~ksDVwSfGvvL~Ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 657 (721)
++..|+|||.+....++.++|||||||++|||+| |+.||... ...+....+..+.. ...
T Consensus 526 ~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~--~~~~~~~~i~~~~~----------~~~ 593 (635)
T 4fl3_A 526 YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM--KGSEVTAMLEKGER----------MGC 593 (635)
T ss_dssp ---------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTC--CHHHHHHHHHTTCC----------CCC
T ss_pred cccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC--CHHHHHHHHHcCCC----------CCC
Confidence 1245999999999999999999999999999999 99999643 23333333333211 112
Q ss_pred cHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhh
Q 004979 658 QENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITA 695 (721)
Q Consensus 658 ~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~i~~ 695 (721)
+..++.++.+||.+||+.||++||++.+|++.|+++..
T Consensus 594 p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~ 631 (635)
T 4fl3_A 594 PAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY 631 (635)
T ss_dssp CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence 23456789999999999999999999999999998754
No 143
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=1.4e-37 Score=327.17 Aligned_cols=250 Identities=24% Similarity=0.371 Sum_probs=196.3
Q ss_pred hhhCcCCCCceeEEEEEEecCC----cEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceE
Q 004979 430 NIIGSFSDGTVGTVYKGTLSSG----VEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTR 505 (721)
Q Consensus 430 ~ii~~lg~G~~g~Vyk~~~~~~----~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~ 505 (721)
++.+.+|+|+||+||+|+.... ..+++|.+.... .....+.+.+|++++++++||||+++++++...+. ..
T Consensus 28 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~-~~ 102 (298)
T 3f66_A 28 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT----DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG-SP 102 (298)
T ss_dssp EEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCC----SHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSS-CC
T ss_pred hhcceeeecCCceEEEEEEecCCCceeEEEEEecccCC----CHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCC-ce
Confidence 5677899999999999986432 246777665321 23345679999999999999999999999765443 46
Q ss_pred EEEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCCC
Q 004979 506 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT 585 (721)
Q Consensus 506 ~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~~ 585 (721)
++||||+++|+|.+++.. ....+++..+..|+.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++...
T Consensus 103 ~~v~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~ql~~~l~~lH~~~--i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~ 179 (298)
T 3f66_A 103 LVVLPYMKHGDLRNFIRN-ETHNPTVKDLIGFGLQVAKGMKYLASKK--FVHRDLAARNCMLDEKFTVKVADFGLARDMY 179 (298)
T ss_dssp EEEEECCTTCBHHHHHHC-TTCCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEECTTCCEEECSCGGGCCCS
T ss_pred EEEEeCCCCCCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhCC--ccCCCCchheEEECCCCCEEECccccccccc
Confidence 899999999999999963 3456899999999999999999999998 9999999999999999999999999986432
Q ss_pred C-------------CCccccchhhcccCCCCCCccHHHHHHHHHHHHh-CCCcccCCCCCHHHHHHHHhhcCCCCccccC
Q 004979 586 A-------------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVD 651 (721)
Q Consensus 586 ~-------------~~~~~~apE~~~~~~~s~ksDVwSfGvvL~Ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d 651 (721)
. ++..|+|||.+.+..++.++|||||||++|||+| |..||..... .+.......+...
T Consensus 180 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~------ 251 (298)
T 3f66_A 180 DKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT--FDITVYLLQGRRL------ 251 (298)
T ss_dssp CGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCT--TTHHHHHHTTCCC------
T ss_pred ccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCH--HHHHHHHhcCCCC------
Confidence 1 2235899999999999999999999999999999 5555543222 1222222222111
Q ss_pred CccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCCC
Q 004979 652 PTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPD 699 (721)
Q Consensus 652 ~~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~ 699 (721)
..+..++.++.+++.+||+.||++||++.|+++.|+++......
T Consensus 252 ----~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~~ 295 (298)
T 3f66_A 252 ----LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 295 (298)
T ss_dssp ----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTSCC
T ss_pred ----CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhcc
Confidence 11123446789999999999999999999999999998876554
No 144
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=6.9e-38 Score=332.13 Aligned_cols=251 Identities=20% Similarity=0.344 Sum_probs=201.1
Q ss_pred hhhhCcCCCCceeEEEEEEe------cCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcC-CCCccceEeEEEecCC
Q 004979 429 SNIIGSFSDGTVGTVYKGTL------SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDE 501 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~------~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l-~H~nIv~l~g~~~~~~ 501 (721)
+++.+.+|+|+||+||+|+. .+++.||||++.... .....+.+.+|++++.++ +||||+++++++...+
T Consensus 29 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 104 (316)
T 2xir_A 29 LKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA----THSEHRALMSELKILIHIGHHLNVVNLLGACTKPG 104 (316)
T ss_dssp EEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTT
T ss_pred eeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCC----CcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCC
Confidence 47788999999999999984 345789999886432 123446799999999999 7999999999987654
Q ss_pred CceEEEEEecCCCCChhhhhhhccC--------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEe
Q 004979 502 PFTRMMVFEYSPNGSLFEHLHIQEA--------------EHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYL 567 (721)
Q Consensus 502 ~~~~~lV~Ey~~~GsL~~~l~~~~~--------------~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl 567 (721)
. ..++||||+++|+|.+++..... ..+++..+..++.|++.||+|||+.+ |+||||||+|||+
T Consensus 105 ~-~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~--i~H~dikp~Nil~ 181 (316)
T 2xir_A 105 G-PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILL 181 (316)
T ss_dssp S-CCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEE
T ss_pred C-ceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCC--cccccCccceEEE
Confidence 3 36999999999999999974332 12889999999999999999999988 9999999999999
Q ss_pred CCCCcEEEeccCCCCCCCC-----------CCccccchhhcccCCCCCCccHHHHHHHHHHHHh-CCCcccCCCCCHHHH
Q 004979 568 TEDYAAKISDFSFWNNTTA-----------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENW 635 (721)
Q Consensus 568 ~~~~~~kL~DFGla~~~~~-----------~~~~~~apE~~~~~~~s~ksDVwSfGvvL~Ellt-G~~P~~~~~~~~~~~ 635 (721)
+.++.+||+|||+++.... ++..|+|||.+.+..++.++|||||||++|||+| |+.||....... ..
T Consensus 182 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~-~~ 260 (316)
T 2xir_A 182 SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-EF 260 (316)
T ss_dssp CGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSH-HH
T ss_pred CCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhH-HH
Confidence 9999999999999864322 1235899999999999999999999999999999 999996543322 22
Q ss_pred HHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcC
Q 004979 636 ASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAME 697 (721)
Q Consensus 636 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 697 (721)
......+.. . ..+...+.++.+++.+||+.||++||++.|+++.|+++.+..
T Consensus 261 ~~~~~~~~~-~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 312 (316)
T 2xir_A 261 CRRLKEGTR-M---------RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 312 (316)
T ss_dssp HHHHHHTCC-C---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HHHhccCcc-C---------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhh
Confidence 222222211 0 111234567899999999999999999999999999987654
No 145
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.2e-37 Score=325.46 Aligned_cols=252 Identities=21% Similarity=0.309 Sum_probs=198.2
Q ss_pred hhCcCCCCceeEEEEEEecC-C---cEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEE
Q 004979 431 IIGSFSDGTVGTVYKGTLSS-G---VEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRM 506 (721)
Q Consensus 431 ii~~lg~G~~g~Vyk~~~~~-~---~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~ 506 (721)
+.+.+|+|+||+||+|++.+ + ..+|+|++.... .....+.+.+|++++++++||||+++++++.+.+. ..+
T Consensus 25 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~-~~~ 99 (298)
T 3pls_A 25 SDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRIT----EMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEG-LPH 99 (298)
T ss_dssp EEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCC----SHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSS-CCE
T ss_pred cCceeccCCCceEEEEEEecCCCceeeeeeeeccccc----cHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCC-CcE
Confidence 34678999999999998532 2 268888775322 22345689999999999999999999999986553 348
Q ss_pred EEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCCC-
Q 004979 507 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT- 585 (721)
Q Consensus 507 lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~~- 585 (721)
+||||+.+|+|.+++.. ....+++..+..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++...
T Consensus 100 ~v~e~~~~~~L~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~--i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~ 176 (298)
T 3pls_A 100 VLLPYMCHGDLLQFIRS-PQRNPTVKDLISFGLQVARGMEYLAEQK--FVHRDLAARNCMLDESFTVKVADFGLARDILD 176 (298)
T ss_dssp EEECCCTTCBHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEECTTCCEEECCTTSSCTTTT
T ss_pred EEEecccCCCHHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCcceEEEcCCCcEEeCcCCCcccccC
Confidence 99999999999999864 3466899999999999999999999998 9999999999999999999999999986321
Q ss_pred ------------CCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCccccCCc
Q 004979 586 ------------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPT 653 (721)
Q Consensus 586 ------------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 653 (721)
.++..|+|||.+.+..++.++|||||||++|||+||..|+.... +..+.......+...
T Consensus 177 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~-~~~~~~~~~~~~~~~-------- 247 (298)
T 3pls_A 177 REYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHI-DPFDLTHFLAQGRRL-------- 247 (298)
T ss_dssp GGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTS-CGGGHHHHHHTTCCC--------
T ss_pred CcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccC-CHHHHHHHhhcCCCC--------
Confidence 12346899999999999999999999999999999666553222 222222222222110
Q ss_pred cccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCCCCC
Q 004979 654 LKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPDGA 701 (721)
Q Consensus 654 l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~~ 701 (721)
..+..++.++.+++.+||+.||++|||+.|+++.|+++........
T Consensus 248 --~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~~~~ 293 (298)
T 3pls_A 248 --PQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLGDH 293 (298)
T ss_dssp --CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCCSCC
T ss_pred --CCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHhccc
Confidence 1122345678999999999999999999999999999988765443
No 146
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=4.5e-38 Score=335.86 Aligned_cols=235 Identities=25% Similarity=0.384 Sum_probs=178.4
Q ss_pred CcCCCCceeEEEEEEec-CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCC-CCccceEeEEEecCCCceEEEEEe
Q 004979 433 GSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN-HKNFVNLIGYCEEDEPFTRMMVFE 510 (721)
Q Consensus 433 ~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~-H~nIv~l~g~~~~~~~~~~~lV~E 510 (721)
+.||+|+||+||+|+.. +++.||||++... ....+.+|++++.+++ |||||++++++.+.+ ..++|||
T Consensus 17 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~--------~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~--~~~lv~e 86 (325)
T 3kn6_A 17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKR--------MEANTQKEITALKLCEGHPNIVKLHEVFHDQL--HTFLVME 86 (325)
T ss_dssp CCSEEETTEEEEEEEETTTCCEEEEEEEEGG--------GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS--EEEEEEC
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEChh--------hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCC--EEEEEEE
Confidence 57899999999999975 6889999988532 1356788999999997 999999999998876 6799999
Q ss_pred cCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCC---cEEEeccCCCCCCC--
Q 004979 511 YSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDY---AAKISDFSFWNNTT-- 585 (721)
Q Consensus 511 y~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~---~~kL~DFGla~~~~-- 585 (721)
|+++|+|.+++.. ...+++..+..|+.|++.||+|||+++ |+||||||+|||++.++ .+||+|||+++...
T Consensus 87 ~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~--ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 162 (325)
T 3kn6_A 87 LLNGGELFERIKK--KKHFSETEASYIMRKLVSAVSHMHDVG--VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPD 162 (325)
T ss_dssp CCCSCBHHHHHHH--CSCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEEEC----CEEEECCCTTCEECCC-
T ss_pred ccCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC--CeecCCCHHHEEEecCCCcccEEEeccccceecCCC
Confidence 9999999999864 356999999999999999999999998 99999999999997665 89999999986322
Q ss_pred -------CCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCCC-----CHHHHHHHHhhcCCCCccccCCc
Q 004979 586 -------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENG-----SLENWASEYLKGEQPLKDIVDPT 653 (721)
Q Consensus 586 -------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~-----~~~~~~~~~~~~~~~~~~~~d~~ 653 (721)
.++..|+|||.+....++.++|||||||++|||+||+.||..... ...+....+..+.....
T Consensus 163 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~------ 236 (325)
T 3kn6_A 163 NQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFE------ 236 (325)
T ss_dssp ---------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCC------
T ss_pred CCcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCC------
Confidence 235578999999999999999999999999999999999974332 22333333333221111
Q ss_pred cccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004979 654 LKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 688 (721)
Q Consensus 654 l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 688 (721)
......++.++.+|+.+||+.||++||++.|+++
T Consensus 237 -~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 270 (325)
T 3kn6_A 237 -GEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRY 270 (325)
T ss_dssp -SHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred -cccccCCCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence 0111335678999999999999999999999874
No 147
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=5.6e-38 Score=327.50 Aligned_cols=246 Identities=18% Similarity=0.331 Sum_probs=197.1
Q ss_pred hhhCcCCCCceeEEEEEEecC----CcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceE
Q 004979 430 NIIGSFSDGTVGTVYKGTLSS----GVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTR 505 (721)
Q Consensus 430 ~ii~~lg~G~~g~Vyk~~~~~----~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~ 505 (721)
++.+.+|+|+||+||+|+... +..|++|.+.... .....+.|.+|++++++++||||+++++++.+.. .
T Consensus 15 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~---~ 87 (281)
T 3cc6_A 15 VLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDC----TLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEP---T 87 (281)
T ss_dssp EEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTS----CHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSSS---C
T ss_pred EEEEEEEecCCeeEEEeEEcCCCCCcceEEEEeccccc----CchHHHHHHHHHHHHHhCCCCCcceEEEEEcCCC---C
Confidence 567788999999999998643 2358888876432 2234578999999999999999999999987543 4
Q ss_pred EEEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCCC
Q 004979 506 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT 585 (721)
Q Consensus 506 ~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~~ 585 (721)
++||||+++|+|.+++.. ....+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++...
T Consensus 88 ~~v~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 164 (281)
T 3cc6_A 88 WIIMELYPYGELGHYLER-NKNSLKVLTLVLYSLQICKAMAYLESIN--CVHRDIAVRNILVASPECVKLGDFGLSRYIE 164 (281)
T ss_dssp EEEEECCTTCBHHHHHHH-HTTTCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCSGGGEEEEETTEEEECCCCGGGCC-
T ss_pred EEEEecCCCCCHHHHHHh-ccccCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCccceEEECCCCcEEeCccCCCcccc
Confidence 899999999999999864 3456899999999999999999999998 9999999999999999999999999876432
Q ss_pred ----------CCCccccchhhcccCCCCCCccHHHHHHHHHHHHh-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCcc
Q 004979 586 ----------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTL 654 (721)
Q Consensus 586 ----------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~Ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 654 (721)
.++..|+|||.+....++.++|||||||++|||+| |+.||...... +.......+...
T Consensus 165 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~--~~~~~~~~~~~~--------- 233 (281)
T 3cc6_A 165 DEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENK--DVIGVLEKGDRL--------- 233 (281)
T ss_dssp --------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGG--GHHHHHHHTCCC---------
T ss_pred cccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChH--HHHHHHhcCCCC---------
Confidence 12346999999998999999999999999999999 99999643221 122222222110
Q ss_pred ccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcC
Q 004979 655 KSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAME 697 (721)
Q Consensus 655 ~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 697 (721)
..+..+++++.+++.+||+.||++||++.|+++.|+++.+..
T Consensus 234 -~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~ 275 (281)
T 3cc6_A 234 -PKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQME 275 (281)
T ss_dssp -CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred -CCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHhh
Confidence 111234567889999999999999999999999999987643
No 148
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.1e-37 Score=330.23 Aligned_cols=251 Identities=21% Similarity=0.288 Sum_probs=193.4
Q ss_pred hhhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEEE
Q 004979 429 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 507 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~l 507 (721)
+++++.+|+|+||+||+|+.. ++..||+|++..... .....+.+.+|++++++++||||+++++++.+.+ ..++
T Consensus 5 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~l 79 (311)
T 4agu_A 5 YEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESED---DPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKR--RLHL 79 (311)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC----HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEE
T ss_pred ceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeecccc---chHHHHHHHHHHHHHHhCCCCCccchhheeecCC--eEEE
Confidence 367788999999999999975 588999998864432 2334567899999999999999999999998876 6799
Q ss_pred EEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCCC--
Q 004979 508 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT-- 585 (721)
Q Consensus 508 V~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~~-- 585 (721)
||||+++++|.+++. ....+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 80 v~e~~~~~~l~~~~~--~~~~~~~~~~~~i~~~l~~~l~~lH~~~--ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 155 (311)
T 4agu_A 80 VFEYCDHTVLHELDR--YQRGVPEHLVKSITWQTLQAVNFCHKHN--CIHRDVKPENILITKHSVIKLCDFGFARLLTGP 155 (311)
T ss_dssp EEECCSEEHHHHHHH--TSSCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTSCEEECCCTTCEECC--
T ss_pred EEEeCCCchHHHHHh--hhcCCCHHHHHHHHHHHHHHHHHHHHCC--CcCCCCChhhEEEcCCCCEEEeeCCCchhccCc
Confidence 999999999998875 3456899999999999999999999998 9999999999999999999999999985432
Q ss_pred -------CCCccccchhhccc-CCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHH-HHHHHHhhc-----------CCC
Q 004979 586 -------AAKTGSAAMELLET-SAVDLESNVYSFGTILFEMITGRISYSIENGSLE-NWASEYLKG-----------EQP 645 (721)
Q Consensus 586 -------~~~~~~~apE~~~~-~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~-~~~~~~~~~-----------~~~ 645 (721)
.++..|+|||.+.+ ..++.++|||||||++|||+||+.||........ ..+...... ...
T Consensus 156 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (311)
T 4agu_A 156 SDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQY 235 (311)
T ss_dssp ----------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGG
T ss_pred ccccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccc
Confidence 24556899999865 6789999999999999999999999964332111 111111100 000
Q ss_pred Cc--cccCCcc----ccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004979 646 LK--DIVDPTL----KSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 688 (721)
Q Consensus 646 ~~--~~~d~~l----~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 688 (721)
.. .+.++.. ....+..+.++.+++.+||+.||++|||++|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 284 (311)
T 4agu_A 236 FSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH 284 (311)
T ss_dssp GTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred cccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 00 0001100 0011235567899999999999999999999986
No 149
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=6.4e-38 Score=334.72 Aligned_cols=249 Identities=25% Similarity=0.439 Sum_probs=199.2
Q ss_pred hhhCcCCCCceeEEEEEEec-CCcEE--EEEEeeeccccchhhHHHHHHHHHHHHHhcC-CCCccceEeEEEecCCCceE
Q 004979 430 NIIGSFSDGTVGTVYKGTLS-SGVEI--AVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPFTR 505 (721)
Q Consensus 430 ~ii~~lg~G~~g~Vyk~~~~-~~~~v--avk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l-~H~nIv~l~g~~~~~~~~~~ 505 (721)
++.+.+|+|+||.||+|+.. ++..+ ++|.+.... .....+.+.+|++++.++ +||||+++++++.+.+ ..
T Consensus 28 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~----~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~--~~ 101 (327)
T 1fvr_A 28 KFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA----SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG--YL 101 (327)
T ss_dssp EEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC----------CHHHHHHHHHTTCCCCTTBCCEEEEEEETT--EE
T ss_pred cceeeeecCCCceEEEEEEccCCcccceeeeeecccc----chHHHHHHHHHHHHHHhccCCCchhhhceeeeeCC--ce
Confidence 67788999999999999964 45544 777765322 122346789999999999 9999999999998877 67
Q ss_pred EEEEecCCCCChhhhhhhcc--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCC
Q 004979 506 MMVFEYSPNGSLFEHLHIQE--------------AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDY 571 (721)
Q Consensus 506 ~lV~Ey~~~GsL~~~l~~~~--------------~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~ 571 (721)
++||||+++|+|.+++.... ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~dlkp~NIl~~~~~ 179 (327)
T 1fvr_A 102 YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ--FIHRDLAARNILVGENY 179 (327)
T ss_dssp EEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECGGG
T ss_pred EEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC--ccCCCCccceEEEcCCC
Confidence 99999999999999986432 246899999999999999999999998 99999999999999999
Q ss_pred cEEEeccCCCCCCC--------CCCccccchhhcccCCCCCCccHHHHHHHHHHHHh-CCCcccCCCCCHHHHHHHHhhc
Q 004979 572 AAKISDFSFWNNTT--------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKG 642 (721)
Q Consensus 572 ~~kL~DFGla~~~~--------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~Ellt-G~~P~~~~~~~~~~~~~~~~~~ 642 (721)
.+||+|||+++... .++..|+|||.+....++.++|||||||++|||+| |+.||... ...+.......+
T Consensus 180 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~--~~~~~~~~~~~~ 257 (327)
T 1fvr_A 180 VAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM--TCAELYEKLPQG 257 (327)
T ss_dssp CEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTC--CHHHHHHHGGGT
T ss_pred eEEEcccCcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCC--cHHHHHHHhhcC
Confidence 99999999875321 23446999999988889999999999999999998 99999633 333333333222
Q ss_pred CCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCC
Q 004979 643 EQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEP 698 (721)
Q Consensus 643 ~~~~~~~~d~~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 698 (721)
... ..+..++.++.+++.+||+.||++||++.|+++.|+++.....
T Consensus 258 ~~~----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 303 (327)
T 1fvr_A 258 YRL----------EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERK 303 (327)
T ss_dssp CCC----------CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSS
T ss_pred CCC----------CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhhc
Confidence 110 1122345678999999999999999999999999999877543
No 150
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=7.4e-38 Score=336.73 Aligned_cols=240 Identities=22% Similarity=0.299 Sum_probs=192.0
Q ss_pred hhhhCcCCCCceeEEEEEEecCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCC--CccceEeEEEecCCCceEE
Q 004979 429 SNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNH--KNFVNLIGYCEEDEPFTRM 506 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H--~nIv~l~g~~~~~~~~~~~ 506 (721)
|++++.||+|+||+||+|...++..||||++..... .....+.+.+|+++|.+++| +||+++++++.+.+ ..+
T Consensus 11 y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~---~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~--~~~ 85 (343)
T 3dbq_A 11 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEA---DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ--YIY 85 (343)
T ss_dssp EEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTC---CHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS--EEE
T ss_pred EEEEEEEecCCCeEEEEEEeCCCCEEEEEEeecccc---chHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCC--EEE
Confidence 477889999999999999988899999999875432 23345679999999999976 99999999999877 779
Q ss_pred EEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCC--
Q 004979 507 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT-- 584 (721)
Q Consensus 507 lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~-- 584 (721)
+||| +.+|+|.+++.. ...+++..+..|+.||+.||+|||+.+ |+||||||+|||++ ++.+||+|||+++..
T Consensus 86 lv~e-~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~al~~lH~~~--iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~ 159 (343)
T 3dbq_A 86 MVME-CGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIHQHG--IVHSDLKPANFLIV-DGMLKLIDFGIANQMQP 159 (343)
T ss_dssp EEEC-CCSEEHHHHHHH--SCCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEEE-TTEEEECCCSSSCCC--
T ss_pred EEEe-CCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCcceEEEE-CCcEEEeecccccccCc
Confidence 9999 568899999864 456899999999999999999999998 99999999999997 578999999998643
Q ss_pred ---------CCCCccccchhhccc-----------CCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCC
Q 004979 585 ---------TAAKTGSAAMELLET-----------SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQ 644 (721)
Q Consensus 585 ---------~~~~~~~~apE~~~~-----------~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~ 644 (721)
..++..|+|||.+.. ..++.++|||||||++|||+||+.||........ ..........
T Consensus 160 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-~~~~~~~~~~ 238 (343)
T 3dbq_A 160 DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS-KLHAIIDPNH 238 (343)
T ss_dssp ----------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHH-HHHHHHCTTS
T ss_pred ccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHH-HHHHHhcCCc
Confidence 235668999999854 6789999999999999999999999964332222 2222221111
Q ss_pred CCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004979 645 PLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 689 (721)
Q Consensus 645 ~~~~~~d~~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 689 (721)
. ..++.....++.+++.+||+.||++|||+.|+++.
T Consensus 239 ~---------~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h 274 (343)
T 3dbq_A 239 E---------IEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 274 (343)
T ss_dssp C---------CCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred c---------cCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence 1 01112234578899999999999999999999864
No 151
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=5e-38 Score=327.25 Aligned_cols=239 Identities=19% Similarity=0.311 Sum_probs=178.6
Q ss_pred hhhCcCCCCceeEEEEEEe-cCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEEEE
Q 004979 430 NIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 508 (721)
Q Consensus 430 ~ii~~lg~G~~g~Vyk~~~-~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~lV 508 (721)
++.+.+|+|+||.||+|+. .+++.|++|++...... .....+.+.+|++++++++||||+++++++.+.+ ..++|
T Consensus 14 ~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv 89 (278)
T 3cok_A 14 KVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMY--KAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSN--YVYLV 89 (278)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHH--HTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSS--EEEEE
T ss_pred eeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhh--hhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCC--eEEEE
Confidence 6778899999999999996 57889999988643211 1122467899999999999999999999998876 67999
Q ss_pred EecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCCC---
Q 004979 509 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT--- 585 (721)
Q Consensus 509 ~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~~--- 585 (721)
|||+++|+|.+++.. ....+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++....
T Consensus 90 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~ 166 (278)
T 3cok_A 90 LEMCHNGEMNRYLKN-RVKPFSENEARHFMHQIITGMLYLHSHG--ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPH 166 (278)
T ss_dssp EECCTTEEHHHHHHT-CSSCCCHHHHHHHHHHHHHHHHHHHHTT--EECSSCCGGGEEECTTCCEEECCCTTCEECC---
T ss_pred EecCCCCcHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEEcCCCCEEEEeecceeeccCCC
Confidence 999999999999863 3356899999999999999999999998 9999999999999999999999999875432
Q ss_pred ------CCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccH
Q 004979 586 ------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQE 659 (721)
Q Consensus 586 ------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 659 (721)
.++..|+|||.+....++.++|||||||++|||+||+.||...... +........ . ...+.
T Consensus 167 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~~~~~----------~-~~~~~ 233 (278)
T 3cok_A 167 EKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVK--NTLNKVVLA----------D-YEMPS 233 (278)
T ss_dssp -------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-------CCSS----------C-CCCCT
T ss_pred CcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHH--HHHHHHhhc----------c-cCCcc
Confidence 2355789999999889999999999999999999999999643321 111111100 0 01223
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004979 660 NVLEELLVVIKNCVHPDPKQRPSMRGIAA 688 (721)
Q Consensus 660 ~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 688 (721)
..+.++.+++.+||+.||++||++.|+++
T Consensus 234 ~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 234 FLSIEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp TSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 34567899999999999999999999975
No 152
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.1e-38 Score=336.14 Aligned_cols=251 Identities=23% Similarity=0.344 Sum_probs=198.5
Q ss_pred hhhhCcCCCCceeEEEEEEe-----cCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCc
Q 004979 429 SNIIGSFSDGTVGTVYKGTL-----SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPF 503 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~-----~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~ 503 (721)
+++++.+|+|+||.||+|++ .++..||||++.... ....+.+.+|++++++++||||+++++++...+..
T Consensus 43 y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 117 (326)
T 2w1i_A 43 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST-----EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR 117 (326)
T ss_dssp EEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCC-----SHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----
T ss_pred ceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCC-----HHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCC
Confidence 46788999999999999984 367889999886432 23356799999999999999999999998765433
Q ss_pred eEEEEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCC
Q 004979 504 TRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN 583 (721)
Q Consensus 504 ~~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~ 583 (721)
..++||||+++|+|.+++... ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 118 ~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~dikp~NIli~~~~~~kL~Dfg~~~~ 194 (326)
T 2w1i_A 118 NLKLIMEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVENENRVKIGDFGLTKV 194 (326)
T ss_dssp CCEEEECCCTTCBHHHHHHHS-TTSSCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEEEETTEEEECCCTTCEE
T ss_pred ceEEEEECCCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhCC--EeccCCCcceEEEcCCCcEEEecCcchhh
Confidence 568999999999999999643 356899999999999999999999988 99999999999999999999999998753
Q ss_pred CCC------------CCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHH-------------HHHHH
Q 004979 584 TTA------------AKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLE-------------NWASE 638 (721)
Q Consensus 584 ~~~------------~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~-------------~~~~~ 638 (721)
... ++..|+|||.+.+..++.++|||||||++|||+||+.||........ .....
T Consensus 195 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (326)
T 2w1i_A 195 LPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIE 274 (326)
T ss_dssp CCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHH
T ss_pred ccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHH
Confidence 321 22358999999888899999999999999999999998852110000 00111
Q ss_pred HhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhc
Q 004979 639 YLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAM 696 (721)
Q Consensus 639 ~~~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~i~~~ 696 (721)
.+.... ....+..++.++.+++.+||+.||++||++.||++.|+++.+.
T Consensus 275 ~~~~~~---------~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~ 323 (326)
T 2w1i_A 275 LLKNNG---------RLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQ 323 (326)
T ss_dssp HHHTTC---------CCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HhhcCC---------CCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 111110 0112234567899999999999999999999999999998753
No 153
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=1.5e-37 Score=325.26 Aligned_cols=241 Identities=19% Similarity=0.285 Sum_probs=192.9
Q ss_pred hhhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEEE
Q 004979 429 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 507 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~l 507 (721)
+.+.+.+|+|+||+||+|+.. ++..+++|++...... ...+.+.+|++++++++||||+++++++.+.+ ..++
T Consensus 24 y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~----~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~l 97 (285)
T 3is5_A 24 FIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQ----VPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYH--NMYI 97 (285)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCC----SCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEE
T ss_pred eeecceeccCCCeEEEEEEEccCCceEEEEEeeccccc----hhHHHHHHHHHHHHhCCCchHHhHHHheecCC--eEEE
Confidence 467789999999999999964 6788999988654321 12467899999999999999999999998776 6799
Q ss_pred EEecCCCCChhhhhhhc--cCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEe---CCCCcEEEeccCCCC
Q 004979 508 VFEYSPNGSLFEHLHIQ--EAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYL---TEDYAAKISDFSFWN 582 (721)
Q Consensus 508 V~Ey~~~GsL~~~l~~~--~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl---~~~~~~kL~DFGla~ 582 (721)
||||+++|+|.+++... ....+++..+..|+.|++.||+|||+.+ |+||||||+|||+ +.++.+||+|||+++
T Consensus 98 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~--ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~ 175 (285)
T 3is5_A 98 VMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQH--VVHKDLKPENILFQDTSPHSPIKIIDFGLAE 175 (285)
T ss_dssp EECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCSGGGEEESSSSTTCCEEECCCCCCC
T ss_pred EEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC--EEECCCCHHHEEEecCCCCCCEEEEeeecce
Confidence 99999999999998643 3467999999999999999999999998 9999999999999 456889999999986
Q ss_pred CC--------CCCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcc
Q 004979 583 NT--------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTL 654 (721)
Q Consensus 583 ~~--------~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 654 (721)
.. ..++..|+|||.+. ..++.++|||||||++|||+||+.||... ...+...............
T Consensus 176 ~~~~~~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~--~~~~~~~~~~~~~~~~~~~----- 247 (285)
T 3is5_A 176 LFKSDEHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGT--SLEEVQQKATYKEPNYAVE----- 247 (285)
T ss_dssp C----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHCCCCCCC------
T ss_pred ecCCcccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCC--CHHHHHhhhccCCcccccc-----
Confidence 42 22456789999875 56899999999999999999999999643 3333333333222211110
Q ss_pred ccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004979 655 KSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 688 (721)
Q Consensus 655 ~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 688 (721)
....++++.+++.+||+.||++||++.|+++
T Consensus 248 ---~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 248 ---CRPLTPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp ----CCCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred ---cCcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1113467889999999999999999999975
No 154
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=1.4e-37 Score=326.03 Aligned_cols=244 Identities=23% Similarity=0.341 Sum_probs=194.7
Q ss_pred hhhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecC--CCceE
Q 004979 429 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEED--EPFTR 505 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~--~~~~~ 505 (721)
+++...+|+|+||+||+|... ++..|++|++..... .....+.+.+|++++++++||||+++++++... +....
T Consensus 28 ~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 104 (290)
T 1t4h_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKL---TKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCI 104 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS---CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEE
T ss_pred EEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhh---CHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceE
Confidence 356667999999999999864 677899988764332 233457899999999999999999999998652 22357
Q ss_pred EEEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeC-CCCcEEEeccCCCCCC
Q 004979 506 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLT-EDYAAKISDFSFWNNT 584 (721)
Q Consensus 506 ~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~-~~~~~kL~DFGla~~~ 584 (721)
++||||+++|+|.+++... ..+++..+..|+.|++.||+|||+.+++|+||||||+|||++ +++.+||+|||++...
T Consensus 105 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~ 182 (290)
T 1t4h_A 105 VLVTELMTSGTLKTYLKRF--KVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK 182 (290)
T ss_dssp EEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGC
T ss_pred EEEEEecCCCCHHHHHHHc--cCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCCCEEEeeCCCcccc
Confidence 9999999999999999643 568999999999999999999999877799999999999998 8899999999987532
Q ss_pred C-------CCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccc
Q 004979 585 T-------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSF 657 (721)
Q Consensus 585 ~-------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 657 (721)
. .++..|+|||.+. ..++.++|||||||++|||+||+.||.... ...........+..+ ...
T Consensus 183 ~~~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~-~~~~~~~~~~~~~~~---------~~~ 251 (290)
T 1t4h_A 183 RASFAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQ-NAAQIYRRVTSGVKP---------ASF 251 (290)
T ss_dssp CTTSBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCS-SHHHHHHHHTTTCCC---------GGG
T ss_pred cccccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcC-cHHHHHHHHhccCCc---------ccc
Confidence 2 2456799999876 458999999999999999999999996432 333333333322111 011
Q ss_pred cHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004979 658 QENVLEELLVVIKNCVHPDPKQRPSMRGIAA 688 (721)
Q Consensus 658 ~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 688 (721)
....+.++.+++.+||+.||++||++.|+++
T Consensus 252 ~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 252 DKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp GGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CCCCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 2233467899999999999999999999985
No 155
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=8.2e-38 Score=343.49 Aligned_cols=238 Identities=18% Similarity=0.289 Sum_probs=185.5
Q ss_pred CcCCCCceeEEEEEEec-CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHh-cCCCCccceEeEEEec--CCCceEEEE
Q 004979 433 GSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLS-KVNHKNFVNLIGYCEE--DEPFTRMMV 508 (721)
Q Consensus 433 ~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~-~l~H~nIv~l~g~~~~--~~~~~~~lV 508 (721)
+.||+|+||+||+|+.. ++..||||++... ..+.+|++++. ..+||||+++++++.. .+....|+|
T Consensus 68 ~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~----------~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv 137 (400)
T 1nxk_A 68 QVLGLGINGKVLQIFNKRTQEKFALKMLQDC----------PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIV 137 (400)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECS----------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEE
T ss_pred ceeeeccCeEEEEEEECCCCCEEEEEEeCcc----------hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEE
Confidence 57899999999999965 6888999988521 34677888874 4589999999998864 222267999
Q ss_pred EecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCC---CCcEEEeccCCCCCCC
Q 004979 509 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTE---DYAAKISDFSFWNNTT 585 (721)
Q Consensus 509 ~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~---~~~~kL~DFGla~~~~ 585 (721)
|||+++|+|.+++.......+++..+..|+.||+.||+|||+++ |+||||||+|||++. ++.+||+|||+++...
T Consensus 138 ~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~ 215 (400)
T 1nxk_A 138 MECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 215 (400)
T ss_dssp EECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEESSSSTTCCEEECCCTTCEECC
T ss_pred EEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCcCcceEEEecCCCCccEEEEecccccccC
Confidence 99999999999997554557999999999999999999999988 999999999999997 7899999999986432
Q ss_pred --------CCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCH--HHHHHHHhhcCCCCccccCCccc
Q 004979 586 --------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSL--ENWASEYLKGEQPLKDIVDPTLK 655 (721)
Q Consensus 586 --------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~--~~~~~~~~~~~~~~~~~~d~~l~ 655 (721)
.++..|+|||++....++.++|||||||++|||+||+.||....... ......+..+..... .+
T Consensus 216 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~---~~--- 289 (400)
T 1nxk_A 216 SHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFP---NP--- 289 (400)
T ss_dssp -----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCCC---TT---
T ss_pred CCCccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcccCC---Cc---
Confidence 23567999999999999999999999999999999999997433210 111122222211111 01
Q ss_pred cccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004979 656 SFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 689 (721)
Q Consensus 656 ~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 689 (721)
....++.++.+|+.+||+.||++|||+.|+++.
T Consensus 290 -~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 322 (400)
T 1nxk_A 290 -EWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 322 (400)
T ss_dssp -TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred -ccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 112345778999999999999999999999874
No 156
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=8.2e-38 Score=328.10 Aligned_cols=245 Identities=21% Similarity=0.326 Sum_probs=196.7
Q ss_pred hhhC-cCCCCceeEEEEEEec---CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceE
Q 004979 430 NIIG-SFSDGTVGTVYKGTLS---SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTR 505 (721)
Q Consensus 430 ~ii~-~lg~G~~g~Vyk~~~~---~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~ 505 (721)
++.+ .+|+|+||+||+|.+. ++..|+||++..... .....+.+.+|++++++++||||+++++++.. + ..
T Consensus 19 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~--~~ 92 (291)
T 1xbb_A 19 TLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAN---DPALKDELLAEANVMQQLDNPYIVRMIGICEA-E--SW 92 (291)
T ss_dssp EEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC--------CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES-S--SE
T ss_pred hhccCccccccCeeeEeeeecCCCceeeEEEEeeccccc---CHHHHHHHHHHHHHHHhCCCCCEEEEEEEECC-C--Cc
Confidence 4556 7899999999999642 467899998864322 12345679999999999999999999999943 3 46
Q ss_pred EEEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCCC
Q 004979 506 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT 585 (721)
Q Consensus 506 ~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~~ 585 (721)
++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 93 ~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~--i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 168 (291)
T 1xbb_A 93 MLVMEMAELGPLNKYLQQ--NRHVKDKNIIELVHQVSMGMKYLEESN--FVHRDLAARNVLLVTQHYAKISDFGLSKALR 168 (291)
T ss_dssp EEEEECCTTEEHHHHHHH--CTTCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEEEETTEEEECCCTTCEECC
T ss_pred EEEEEeCCCCCHHHHHHh--CcCCCHHHHHHHHHHHHHHHHHHHhCC--eEcCCCCcceEEEeCCCcEEEccCCcceeec
Confidence 899999999999999964 356899999999999999999999998 9999999999999999999999999875332
Q ss_pred C------------CCccccchhhcccCCCCCCccHHHHHHHHHHHHh-CCCcccCCCCCHHHHHHHHhhcCCCCccccCC
Q 004979 586 A------------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDP 652 (721)
Q Consensus 586 ~------------~~~~~~apE~~~~~~~s~ksDVwSfGvvL~Ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 652 (721)
. ++..|+|||.+.+..++.++||||||+++|||+| |+.||.... ..+.......+..
T Consensus 169 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~--~~~~~~~~~~~~~-------- 238 (291)
T 1xbb_A 169 ADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK--GSEVTAMLEKGER-------- 238 (291)
T ss_dssp TTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCC--HHHHHHHHHTTCC--------
T ss_pred cCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCC--HHHHHHHHHcCCC--------
Confidence 1 1245899999988889999999999999999999 999996432 2333333222211
Q ss_pred ccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhc
Q 004979 653 TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAM 696 (721)
Q Consensus 653 ~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~i~~~ 696 (721)
...+..++.++.+++.+||+.||++||++.|+++.|+++...
T Consensus 239 --~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~ 280 (291)
T 1xbb_A 239 --MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYD 280 (291)
T ss_dssp --CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred --CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 112234557899999999999999999999999999987654
No 157
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=2.8e-37 Score=321.38 Aligned_cols=240 Identities=18% Similarity=0.270 Sum_probs=194.6
Q ss_pred hhhhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEE
Q 004979 428 FSNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRM 506 (721)
Q Consensus 428 ~~~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~ 506 (721)
.+.+.+.+|+|+||+||+|+.. ++..+++|++....... .+.+.+|++++++++||||+++++++.+.+ ..+
T Consensus 10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~-----~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~ 82 (277)
T 3f3z_A 10 YYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVED-----VDRFKQEIEIMKSLDHPNIIRLYETFEDNT--DIY 82 (277)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSC-----HHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEE
T ss_pred hEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccch-----HHHHHHHHHHHHhCCCCCEeeEEEEEecCC--eEE
Confidence 3577888999999999999965 46789999886543222 357899999999999999999999998876 679
Q ss_pred EEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEe---CCCCcEEEeccCCCCC
Q 004979 507 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYL---TEDYAAKISDFSFWNN 583 (721)
Q Consensus 507 lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl---~~~~~~kL~DFGla~~ 583 (721)
+||||+++|+|.+++.. ...+++..+..|+.|++.||+|||+.+ |+||||||+|||+ +.++.+||+|||++..
T Consensus 83 lv~e~~~~~~L~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~~--i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~ 158 (277)
T 3f3z_A 83 LVMELCTGGELFERVVH--KRVFRESDAARIMKDVLSAVAYCHKLN--VAHRDLKPENFLFLTDSPDSPLKLIDFGLAAR 158 (277)
T ss_dssp EEEECCCSCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred EEEeccCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC--ccCCCCCHHHEEEecCCCCCcEEEEeccccee
Confidence 99999999999998864 345899999999999999999999998 9999999999999 7889999999998753
Q ss_pred C--------CCCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccc
Q 004979 584 T--------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLK 655 (721)
Q Consensus 584 ~--------~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 655 (721)
. ..++..|+|||.+.+ .++.++|||||||++|||+||+.||... ...+.......+......
T Consensus 159 ~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~--~~~~~~~~~~~~~~~~~~------- 228 (277)
T 3f3z_A 159 FKPGKMMRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAP--TDSEVMLKIREGTFTFPE------- 228 (277)
T ss_dssp CCTTSCBCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHCCCCCCH-------
T ss_pred ccCccchhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCC--CHHHHHHHHHhCCCCCCc-------
Confidence 2 234567999998865 4899999999999999999999999643 333334443333221111
Q ss_pred cccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004979 656 SFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 688 (721)
Q Consensus 656 ~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 688 (721)
......+.++.+++.+||+.||++||++.|+++
T Consensus 229 ~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 229 KDWLNVSPQAESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred hhhhcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 001134567899999999999999999999986
No 158
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=5.9e-38 Score=343.37 Aligned_cols=250 Identities=19% Similarity=0.266 Sum_probs=185.9
Q ss_pred hhhhCcCCCCceeEEEEEEe-cCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCC-CCccceEeEEEecCCCceEE
Q 004979 429 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN-HKNFVNLIGYCEEDEPFTRM 506 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~-~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~-H~nIv~l~g~~~~~~~~~~~ 506 (721)
+++++.+|+|+||+||+|+. .++..||||++..... .....+.+.+|+.++.+++ |||||++++++...+....|
T Consensus 11 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~---~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~ 87 (388)
T 3oz6_A 11 YELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQ---NSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVY 87 (388)
T ss_dssp EEEEEC-------CEEEEEETTTCCEEEEEEECC--C---CHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEE
T ss_pred eEEEEEeeeCCCeEEEEEEECCCCCEEEEEEeccccc---ChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEE
Confidence 47888999999999999985 4688999998854321 1234467889999999997 99999999999865544679
Q ss_pred EEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCC--
Q 004979 507 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT-- 584 (721)
Q Consensus 507 lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~-- 584 (721)
+|||||+ |+|.+++.. ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 88 lv~e~~~-~~L~~~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~~--ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 161 (388)
T 3oz6_A 88 LVFDYME-TDLHAVIRA---NILEPVHKQYVVYQLIKVIKYLHSGG--LLHRDMKPSNILLNAECHVKVADFGLSRSFVN 161 (388)
T ss_dssp EEEECCS-EEHHHHHHH---TCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECTTCCEEECCCTTCEESSS
T ss_pred EEecccC-cCHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCC--EEeCCCCHHHeEEcCCCCEEecCCcccccccc
Confidence 9999997 689988863 46899999999999999999999998 999999999999999999999999998632
Q ss_pred ----------------------------CCCCccccchhhccc-CCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHH
Q 004979 585 ----------------------------TAAKTGSAAMELLET-SAVDLESNVYSFGTILFEMITGRISYSIENGSLENW 635 (721)
Q Consensus 585 ----------------------------~~~~~~~~apE~~~~-~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~ 635 (721)
..++..|+|||.+.+ ..++.++||||+||++|||+||+.||...+ ....
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~--~~~~ 239 (388)
T 3oz6_A 162 IRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSS--TMNQ 239 (388)
T ss_dssp CCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS--HHHH
T ss_pred cccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCC--HHHH
Confidence 134567899999876 678999999999999999999999996432 2222
Q ss_pred HHHHhhcC-CCCcccc----------------------CCcccccc-------------HHHHHHHHHHHHHcccCCCCC
Q 004979 636 ASEYLKGE-QPLKDIV----------------------DPTLKSFQ-------------ENVLEELLVVIKNCVHPDPKQ 679 (721)
Q Consensus 636 ~~~~~~~~-~~~~~~~----------------------d~~l~~~~-------------~~~~~~l~~li~~Cl~~dP~~ 679 (721)
...+.... .+..+.+ ........ ..++.++.+|+.+||+.||++
T Consensus 240 ~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~ 319 (388)
T 3oz6_A 240 LERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNK 319 (388)
T ss_dssp HHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGG
T ss_pred HHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCccc
Confidence 22222110 0000000 00000000 123567899999999999999
Q ss_pred CCCHHHHHHH
Q 004979 680 RPSMRGIAAK 689 (721)
Q Consensus 680 RPs~~evl~~ 689 (721)
|||+.|+++.
T Consensus 320 R~t~~e~l~H 329 (388)
T 3oz6_A 320 RISANDALKH 329 (388)
T ss_dssp SCCHHHHTTS
T ss_pred CCCHHHHhCC
Confidence 9999999875
No 159
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=1.3e-37 Score=348.80 Aligned_cols=265 Identities=14% Similarity=0.199 Sum_probs=207.2
Q ss_pred hhhhCcCCCCceeEEEEEEe-cCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCc-cceEeEEEecCCCceEE
Q 004979 429 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKN-FVNLIGYCEEDEPFTRM 506 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~-~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~n-Iv~l~g~~~~~~~~~~~ 506 (721)
+++++.||+|+||.||+|+. .++..||||++...... .++.+|++++..++|++ |..+..++...+ ..+
T Consensus 9 y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~-------~~~~~E~~il~~L~~~~~i~~i~~~~~~~~--~~~ 79 (483)
T 3sv0_A 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH-------PQLLYESKIYRILQGGTGIPNVRWFGVEGD--YNV 79 (483)
T ss_dssp EECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS-------CCHHHHHHHHHHTTTSTTCCCEEEEEEETT--EEE
T ss_pred EEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc-------HHHHHHHHHHHHhcCCCCCCeEEEEEeeCC--EEE
Confidence 47788999999999999995 57889999987654322 35789999999998754 555555555555 679
Q ss_pred EEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEe---CCCCcEEEeccCCCCC
Q 004979 507 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYL---TEDYAAKISDFSFWNN 583 (721)
Q Consensus 507 lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl---~~~~~~kL~DFGla~~ 583 (721)
|||||+ +|+|.+++.. ....+++..++.|+.||+.||+|||+++ ||||||||+|||| +.++.+||+|||+++.
T Consensus 80 lvme~~-g~sL~~ll~~-~~~~l~~~~~~~i~~qi~~aL~yLH~~g--IvHrDIKP~NILl~~~~~~~~vkL~DFGla~~ 155 (483)
T 3sv0_A 80 LVMDLL-GPSLEDLFNF-CSRKLSLKTVLMLADQMINRVEFVHSKS--FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKK 155 (483)
T ss_dssp EEEECC-CCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECCGGGTTCEEECCCTTCEE
T ss_pred EEEECC-CCCHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHHCC--EeecccCcceEEEecCCCCCeEEEEeCCccee
Confidence 999999 9999999863 3456999999999999999999999998 9999999999999 6889999999999753
Q ss_pred C----------------CCCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCCC-CHHHHHHHHhhcCCCC
Q 004979 584 T----------------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENG-SLENWASEYLKGEQPL 646 (721)
Q Consensus 584 ~----------------~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~-~~~~~~~~~~~~~~~~ 646 (721)
. ..++..|+|||.+.+..++.++|||||||+||||++|+.||..... ...+.+..+....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~--- 232 (483)
T 3sv0_A 156 YRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKK--- 232 (483)
T ss_dssp CBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHH---
T ss_pred ccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhcc---
Confidence 2 2345579999999999999999999999999999999999975432 2222222221110
Q ss_pred ccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCChhHHHHHHh
Q 004979 647 KDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPDGATPKLSPLWWAELEI 715 (721)
Q Consensus 647 ~~~~d~~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~p~~~~~~~~~l~~ 715 (721)
....+......++.++.+++..||+.+|++||++.+|++.|+++..... .+.+..++|+.+..
T Consensus 233 ---~~~~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~~~---~~~~~~~dW~~~~~ 295 (483)
T 3sv0_A 233 ---VATSIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIREG---FQFDYVFDWTILKY 295 (483)
T ss_dssp ---HHSCHHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTT---CCCSSCCHHHHHTC
T ss_pred ---ccccHHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHHcC---CCccCCcCchhhcc
Confidence 0011111223345789999999999999999999999999999877553 35677889987743
No 160
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=3.7e-37 Score=321.58 Aligned_cols=243 Identities=20% Similarity=0.278 Sum_probs=197.4
Q ss_pred hhhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEEE
Q 004979 429 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 507 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~l 507 (721)
+++.+.+|+|+||.||+|... ++..||+|++..... .....+.+.+|++++++++||||+++++++.+.+ ..++
T Consensus 8 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~~ 82 (284)
T 3kk8_A 8 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL---SARDFQKLEREARICRKLQHPNIVRLHDSIQEES--FHYL 82 (284)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC---CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEE
T ss_pred hhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccC---CHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCC--EEEE
Confidence 467788999999999999965 588999998865432 2334567899999999999999999999998776 6799
Q ss_pred EEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCc---EEEeccCCCCCC
Q 004979 508 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYA---AKISDFSFWNNT 584 (721)
Q Consensus 508 V~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~---~kL~DFGla~~~ 584 (721)
||||+++|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++. +||+|||++...
T Consensus 83 v~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~ 158 (284)
T 3kk8_A 83 VFDLVTGGELFEDIVAR--EFYSEADASHCIQQILESIAYCHSNG--IVHRNLKPENLLLASKAKGAAVKLADFGLAIEV 158 (284)
T ss_dssp EECCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEESSSSTTCCEEECCCTTCEEC
T ss_pred EEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC--cCcCCCCHHHEEEecCCCCCcEEEeeceeeEEc
Confidence 99999999999888643 56899999999999999999999998 999999999999986655 999999987432
Q ss_pred --------CCCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccc
Q 004979 585 --------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKS 656 (721)
Q Consensus 585 --------~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 656 (721)
..++..|+|||.+.+..++.++||||||+++|||++|+.||... ...........+...... +
T Consensus 159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~--~~~~~~~~~~~~~~~~~~---~---- 229 (284)
T 3kk8_A 159 NDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDE--DQHRLYAQIKAGAYDYPS---P---- 229 (284)
T ss_dssp CSSCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHTCCCCCT---T----
T ss_pred ccCccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCC--chhHHHHHHHhccccCCc---h----
Confidence 23456789999999999999999999999999999999999643 333334333333221111 1
Q ss_pred ccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004979 657 FQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 689 (721)
Q Consensus 657 ~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 689 (721)
.....+.++.+++.+||+.||++||++.|+++.
T Consensus 230 ~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (284)
T 3kk8_A 230 EWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 262 (284)
T ss_dssp TTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred hhcccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 112345678899999999999999999999873
No 161
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.5e-37 Score=329.68 Aligned_cols=236 Identities=22% Similarity=0.272 Sum_probs=187.0
Q ss_pred hhhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcC-CCCccceEeEEEecCCCceEE
Q 004979 429 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPFTRM 506 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l-~H~nIv~l~g~~~~~~~~~~~ 506 (721)
+++++.+|+|+||+||+|+.. +++.||||++...... ......+..|+..+.++ +|||||+++++|.+.+ ..+
T Consensus 59 y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~--~~~ 133 (311)
T 3p1a_A 59 FQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRG---PKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGG--ILY 133 (311)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCS---HHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEE
T ss_pred eeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccC---hHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCC--EEE
Confidence 477889999999999999976 7899999987543221 22334556666666555 9999999999998877 779
Q ss_pred EEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCC--
Q 004979 507 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT-- 584 (721)
Q Consensus 507 lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~-- 584 (721)
+||||+ +|+|.+++... ...++|..+..|+.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 134 lv~e~~-~~~L~~~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~ 209 (311)
T 3p1a_A 134 LQTELC-GPSLQQHCEAW-GASLPEAQVWGYLRDTLLALAHLHSQG--LVHLDVKPANIFLGPRGRCKLGDFGLLVELGT 209 (311)
T ss_dssp EEEECC-CCBHHHHHHHH-CSCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECGGGCEEECCCTTCEECC-
T ss_pred EEEecc-CCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC--EecCCCCHHHEEECCCCCEEEccceeeeeccc
Confidence 999999 77999988643 456999999999999999999999988 999999999999999999999999987532
Q ss_pred ------CCCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004979 585 ------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 658 (721)
Q Consensus 585 ------~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 658 (721)
..++..|+|||.+.+ .++.++|||||||++|||++|..|+... ..+ .....+. .. ....
T Consensus 210 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~----~~~-~~~~~~~------~~---~~~~ 274 (311)
T 3p1a_A 210 AGAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGG----EGW-QQLRQGY------LP---PEFT 274 (311)
T ss_dssp -----CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSH----HHH-HHHTTTC------CC---HHHH
T ss_pred CCCCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCc----cHH-HHHhccC------CC---cccc
Confidence 234668999998875 7999999999999999999997766421 111 1111110 00 1122
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004979 659 ENVLEELLVVIKNCVHPDPKQRPSMRGIAA 688 (721)
Q Consensus 659 ~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 688 (721)
...+.++.+++.+||+.||++|||+.|+++
T Consensus 275 ~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 275 AGLSSELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp TTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred cCCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 345678999999999999999999999985
No 162
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=6.3e-38 Score=335.20 Aligned_cols=251 Identities=18% Similarity=0.287 Sum_probs=187.5
Q ss_pred hhhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCC-CCccceEeEEEec------C
Q 004979 429 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN-HKNFVNLIGYCEE------D 500 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~-H~nIv~l~g~~~~------~ 500 (721)
+++.+.+|+|+||.||+|+.. +++.||||++.... ....+.+.+|+.++.+++ ||||+++++++.. .
T Consensus 30 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 104 (337)
T 3ll6_A 30 LRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNE-----EEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDT 104 (337)
T ss_dssp EEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESS-----HHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTT
T ss_pred EEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCc-----hHHHHHHHHHHHHHHHhccCCChhhcccccccccccccc
Confidence 367788999999999999964 78899999885432 233467899999999996 9999999999852 1
Q ss_pred CCceEEEEEecCCCCChhhhhhhc-cCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccC
Q 004979 501 EPFTRMMVFEYSPNGSLFEHLHIQ-EAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFS 579 (721)
Q Consensus 501 ~~~~~~lV~Ey~~~GsL~~~l~~~-~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFG 579 (721)
.....++||||+. |+|.+++... ....+++..+..|+.||+.||+|||+.+++|+||||||+|||++.++.+||+|||
T Consensus 105 ~~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg 183 (337)
T 3ll6_A 105 GQAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFG 183 (337)
T ss_dssp SSEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTSCEEBCCCT
T ss_pred CCceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCCCEEEecCc
Confidence 2225799999995 7999988642 3456999999999999999999999987789999999999999999999999999
Q ss_pred CCCCCCC---------------------CCccccchhhc---ccCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHH
Q 004979 580 FWNNTTA---------------------AKTGSAAMELL---ETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENW 635 (721)
Q Consensus 580 la~~~~~---------------------~~~~~~apE~~---~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~ 635 (721)
+++.... ++..|+|||.+ ....++.++|||||||++|||+||+.||..... ...
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~--~~~ 261 (337)
T 3ll6_A 184 SATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAK--LRI 261 (337)
T ss_dssp TCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC----------
T ss_pred cceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhH--HHh
Confidence 9864322 45568999998 567789999999999999999999999963221 111
Q ss_pred HHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCCCC
Q 004979 636 ASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPDG 700 (721)
Q Consensus 636 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~ 700 (721)
.. ...... .......++.+++.+||+.||++||++.|+++.|+++.+.....
T Consensus 262 ~~----~~~~~~---------~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~~~~ 313 (337)
T 3ll6_A 262 VN----GKYSIP---------PHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARNVN 313 (337)
T ss_dssp --------CCCC---------TTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHTTCC
T ss_pred hc----CcccCC---------cccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccCCC
Confidence 11 100000 01122345778999999999999999999999999998865543
No 163
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=9.3e-38 Score=333.67 Aligned_cols=247 Identities=17% Similarity=0.228 Sum_probs=198.4
Q ss_pred hhhhhhh-CcCCCCceeEEEEEEec-CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcC-CCCccceEeEEEecCCC
Q 004979 426 EDFSNII-GSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEP 502 (721)
Q Consensus 426 ~~~~~ii-~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l-~H~nIv~l~g~~~~~~~ 502 (721)
++++.+. +.+|+|+||+||+|+.. +++.||+|++...... ......+.+|+.++.++ +||||+++++++.+.+
T Consensus 27 ~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~- 102 (327)
T 3lm5_A 27 NNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRG---QDCRAEILHEIAVLELAKSCPRVINLHEVYENTS- 102 (327)
T ss_dssp HHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETT---EECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS-
T ss_pred hhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcc---hHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCC-
Confidence 4455555 67999999999999965 6889999988754322 12246789999999999 5699999999998876
Q ss_pred ceEEEEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCC---CCcEEEeccC
Q 004979 503 FTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTE---DYAAKISDFS 579 (721)
Q Consensus 503 ~~~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~---~~~~kL~DFG 579 (721)
..++||||+++|+|.+++.......+++..+..|+.|++.||+|||+.+ |+||||||+|||++. ++.+||+|||
T Consensus 103 -~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~g--ivH~Dikp~NIl~~~~~~~~~~kL~Dfg 179 (327)
T 3lm5_A 103 -EIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNN--IVHLDLKPQNILLSSIYPLGDIKIVDFG 179 (327)
T ss_dssp -EEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEESCBTTBCCEEECCGG
T ss_pred -eEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC--eecCcCChHHEEEecCCCCCcEEEeeCc
Confidence 6799999999999999986555577999999999999999999999998 999999999999998 7899999999
Q ss_pred CCCCCC--------CCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCccccC
Q 004979 580 FWNNTT--------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVD 651 (721)
Q Consensus 580 la~~~~--------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d 651 (721)
+++... .++..|+|||.+....++.++|||||||++|||+||+.||.... ..+..............
T Consensus 180 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~--~~~~~~~i~~~~~~~~~--- 254 (327)
T 3lm5_A 180 MSRKIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGED--NQETYLNISQVNVDYSE--- 254 (327)
T ss_dssp GCEEC---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHHHTCCCCCT---
T ss_pred cccccCCccccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--chHHHHHHHhcccccCc---
Confidence 885332 34567999999999999999999999999999999999996432 23333332222111111
Q ss_pred CccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004979 652 PTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 688 (721)
Q Consensus 652 ~~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 688 (721)
.....++.++.+++.+||+.||++|||++|+++
T Consensus 255 ----~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~ 287 (327)
T 3lm5_A 255 ----ETFSSVSQLATDFIQSLLVKNPEKRPTAEICLS 287 (327)
T ss_dssp ----TTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ----hhhcccCHHHHHHHHHHcCCChhhCcCHHHHhC
Confidence 112234567889999999999999999999975
No 164
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=2.7e-37 Score=322.45 Aligned_cols=254 Identities=18% Similarity=0.254 Sum_probs=202.9
Q ss_pred hhhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccch-hhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEE
Q 004979 429 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADW-SKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRM 506 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~-~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~ 506 (721)
+++++.+|+|+||+||+|+.. ++..+++|++........ .....+.+.+|++++++++||||+++++++.+.+ ..+
T Consensus 7 y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~ 84 (283)
T 3bhy_A 7 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKT--DVV 84 (283)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEE
T ss_pred hhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCC--eEE
Confidence 477889999999999999976 688999998875432211 1112467999999999999999999999998876 679
Q ss_pred EEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCC----cEEEeccCCCC
Q 004979 507 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDY----AAKISDFSFWN 582 (721)
Q Consensus 507 lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~----~~kL~DFGla~ 582 (721)
+||||+++++|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++ .+||+|||++.
T Consensus 85 lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~ 160 (283)
T 3bhy_A 85 LILELVSGGELFDFLAE--KESLTEDEATQFLKQILDGVHYLHSKR--IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH 160 (283)
T ss_dssp EEEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred EEEeecCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC--ccCCCCChHHEEEecCCCCCCceEEEecccce
Confidence 99999999999999864 346899999999999999999999998 99999999999999877 89999999876
Q ss_pred CCC--------CCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcc
Q 004979 583 NTT--------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTL 654 (721)
Q Consensus 583 ~~~--------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 654 (721)
... .++..|+|||.+....++.++||||||+++|||+||+.||... ...+.............
T Consensus 161 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~--~~~~~~~~~~~~~~~~~------- 231 (283)
T 3bhy_A 161 KIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGE--TKQETLTNISAVNYDFD------- 231 (283)
T ss_dssp ECC--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCS--SHHHHHHHHHTTCCCCC-------
T ss_pred eccCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCc--chHHHHHHhHhcccCCc-------
Confidence 432 2456799999999899999999999999999999999999643 23333333322211110
Q ss_pred ccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHHHhhhcC
Q 004979 655 KSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA--KLKEITAME 697 (721)
Q Consensus 655 ~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~--~L~~i~~~~ 697 (721)
.......+.++.+++.+||+.||++||++.|+++ .++.+....
T Consensus 232 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~~~ 276 (283)
T 3bhy_A 232 EEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRRRN 276 (283)
T ss_dssp HHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHHHCC
T ss_pred chhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHHHHh
Confidence 0111234567899999999999999999999997 356655443
No 165
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.9e-38 Score=340.56 Aligned_cols=242 Identities=19% Similarity=0.310 Sum_probs=193.5
Q ss_pred hhhhCcCCCCceeEEEEEEe----cCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcC-CCCccceEeEEEecCCCc
Q 004979 429 SNIIGSFSDGTVGTVYKGTL----SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPF 503 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~----~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l-~H~nIv~l~g~~~~~~~~ 503 (721)
+++++.||+|+||+||+|+. .+++.||||++....... .....+.+.+|++++.++ +||||+++++++...+
T Consensus 56 y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~-- 132 (355)
T 1vzo_A 56 FELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQ-KAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET-- 132 (355)
T ss_dssp EEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEE-EESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT--
T ss_pred eEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhh-hhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc--
Confidence 36778899999999999997 478899999986433211 011224577899999999 6999999999998877
Q ss_pred eEEEEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCC
Q 004979 504 TRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN 583 (721)
Q Consensus 504 ~~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~ 583 (721)
..++||||+++|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~--ivH~Dlkp~NIll~~~~~~kl~DfG~a~~ 208 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQR--ERFTEHEVQIYVGEIVLALEHLHKLG--IIYRDIKLENILLDSNGHVVLTDFGLSKE 208 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTSCEEESCSSEEEE
T ss_pred eEEEEeecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEECCCCcEEEeeCCCCee
Confidence 679999999999999998643 46899999999999999999999998 99999999999999999999999998753
Q ss_pred C----------CCCCccccchhhccc--CCCCCCccHHHHHHHHHHHHhCCCcccCCC--CCHHHHHHHHhhcCCCCccc
Q 004979 584 T----------TAAKTGSAAMELLET--SAVDLESNVYSFGTILFEMITGRISYSIEN--GSLENWASEYLKGEQPLKDI 649 (721)
Q Consensus 584 ~----------~~~~~~~~apE~~~~--~~~s~ksDVwSfGvvL~ElltG~~P~~~~~--~~~~~~~~~~~~~~~~~~~~ 649 (721)
. ..++..|+|||.+.+ ..++.++|||||||++|||+||+.||.... ...............+
T Consensus 209 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~---- 284 (355)
T 1vzo_A 209 FVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPP---- 284 (355)
T ss_dssp CCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCCCC----
T ss_pred cccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhccCCC----
Confidence 2 134667999999875 457899999999999999999999997433 2334444444333221
Q ss_pred cCCccccccHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 004979 650 VDPTLKSFQENVLEELLVVIKNCVHPDPKQRP-----SMRGIAA 688 (721)
Q Consensus 650 ~d~~l~~~~~~~~~~l~~li~~Cl~~dP~~RP-----s~~evl~ 688 (721)
.+...+..+.+|+.+||+.||++|| ++.|+++
T Consensus 285 -------~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~ 321 (355)
T 1vzo_A 285 -------YPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKE 321 (355)
T ss_dssp -------CCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHT
T ss_pred -------CCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHc
Confidence 2233456788999999999999999 8999876
No 166
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=2.4e-37 Score=324.93 Aligned_cols=240 Identities=17% Similarity=0.266 Sum_probs=197.2
Q ss_pred hhhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEEE
Q 004979 429 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 507 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~l 507 (721)
+.+.+.+|+|+||+||+|+.. ++..+++|++...... .....+.+.+|++++++++||||+++++++.+.+ ..++
T Consensus 17 y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~--~~~l 92 (294)
T 2rku_A 17 YVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLL--KPHQREKMSMEISIHRSLAHQHVVGFHGFFEDND--FVFV 92 (294)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCC--SHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEE
T ss_pred eEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhcc--CHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCC--EEEE
Confidence 366788899999999999975 5778899987654322 2334567899999999999999999999998876 6799
Q ss_pred EEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCCC--
Q 004979 508 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT-- 585 (721)
Q Consensus 508 V~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~~-- 585 (721)
||||+++++|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 93 v~e~~~~~~L~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~--i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~ 168 (294)
T 2rku_A 93 VLELCRRRSLLELHKR--RKALTEPEARYYLRQIVLGCQYLHRNR--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD 168 (294)
T ss_dssp EEECCTTCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECTTCCEEECCCTTCEECCST
T ss_pred EEecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCChHhEEEcCCCCEEEEeccCceecccC
Confidence 9999999999998853 346899999999999999999999998 9999999999999999999999999875322
Q ss_pred -------CCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004979 586 -------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 658 (721)
Q Consensus 586 -------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 658 (721)
.++..|+|||.+.+..++.++||||||+++|||+||+.||... ...+........... .+
T Consensus 169 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~--~~~~~~~~~~~~~~~-----------~~ 235 (294)
T 2rku_A 169 GERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS--CLKETYLRIKKNEYS-----------IP 235 (294)
T ss_dssp TCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCS--SHHHHHHHHHTTCCC-----------CC
T ss_pred ccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCC--CHHHHHHHHhhccCC-----------Cc
Confidence 2445699999999889999999999999999999999999643 333333333332211 12
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004979 659 ENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 689 (721)
Q Consensus 659 ~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 689 (721)
.....++.+++.+||+.||++||++.|+++.
T Consensus 236 ~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 236 KHINPVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred cccCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 2344678899999999999999999999874
No 167
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=2e-37 Score=332.17 Aligned_cols=240 Identities=17% Similarity=0.269 Sum_probs=197.4
Q ss_pred hhhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEEE
Q 004979 429 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 507 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~l 507 (721)
+.+.+.+|+|+||.||+++.. ++..+++|++...... .....+.+.+|++++++++||||+++++++.+.+ ..++
T Consensus 43 y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~l 118 (335)
T 2owb_A 43 YVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLL--KPHQREKMSMEISIHRSLAHQHVVGFHGFFEDND--FVFV 118 (335)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCC--SHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEE
T ss_pred eEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhc--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCC--eEEE
Confidence 356778899999999999965 5778899988654322 2334567999999999999999999999999876 6799
Q ss_pred EEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCCC--
Q 004979 508 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT-- 585 (721)
Q Consensus 508 V~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~~-- 585 (721)
||||+++++|.+++.. ...+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++...
T Consensus 119 v~e~~~~~~L~~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~--ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 194 (335)
T 2owb_A 119 VLELCRRRSLLELHKR--RKALTEPEARYYLRQIVLGCQYLHRNR--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD 194 (335)
T ss_dssp EECCCTTCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEECTTCCEEECCCTTCEECCST
T ss_pred EEecCCCCCHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC--CEecCCCchhEEEcCCCCEEEeeccCceecccC
Confidence 9999999999998864 356899999999999999999999998 9999999999999999999999999975332
Q ss_pred -------CCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004979 586 -------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 658 (721)
Q Consensus 586 -------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 658 (721)
.++..|+|||.+.+..++.++|||||||++|||+||+.||... ...+...........+ +
T Consensus 195 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~--~~~~~~~~~~~~~~~~-----------~ 261 (335)
T 2owb_A 195 GERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS--CLKETYLRIKKNEYSI-----------P 261 (335)
T ss_dssp TCCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCS--SHHHHHHHHHHTCCCC-----------C
T ss_pred cccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCC--CHHHHHHHHhcCCCCC-----------C
Confidence 2455799999999999999999999999999999999999633 3333333333332211 1
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004979 659 ENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 689 (721)
Q Consensus 659 ~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 689 (721)
.....++.+++.+||+.||++||++.|+++.
T Consensus 262 ~~~~~~~~~li~~~l~~dp~~Rps~~ell~~ 292 (335)
T 2owb_A 262 KHINPVAASLIQKMLQTDPTARPTINELLND 292 (335)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred ccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 2334678899999999999999999999873
No 168
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=5.5e-38 Score=327.70 Aligned_cols=238 Identities=17% Similarity=0.257 Sum_probs=191.4
Q ss_pred hhhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcC-CCCccceEeEEEecCCCceEE
Q 004979 429 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPFTRM 506 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l-~H~nIv~l~g~~~~~~~~~~~ 506 (721)
+++++.+|+|+||+||+|+.. +++.||+|++...... .....++.+|+..+.++ +||||+++++++.+.+ ..+
T Consensus 13 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~--~~~ 87 (289)
T 1x8b_A 13 FHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAG---SVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDD--HML 87 (289)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTT---SHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETT--EEE
T ss_pred hhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccc---cHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCC--eEE
Confidence 377889999999999999975 7899999988754322 22346788999999999 9999999999998877 679
Q ss_pred EEEecCCCCChhhhhhhcc--CCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCC---------------
Q 004979 507 MVFEYSPNGSLFEHLHIQE--AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTE--------------- 569 (721)
Q Consensus 507 lV~Ey~~~GsL~~~l~~~~--~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~--------------- 569 (721)
+||||+++|+|.+++.... ...+++..+..|+.||+.||+|||+++ |+||||||+|||++.
T Consensus 88 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~--ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~ 165 (289)
T 1x8b_A 88 IQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS--LVHMDIKPSNIFISRTSIPNAASEEGDEDD 165 (289)
T ss_dssp EEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEEC----------------
T ss_pred EEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCC--EeecCCCHHHEEEcCCCCCccccccccccc
Confidence 9999999999999997532 266899999999999999999999998 999999999999984
Q ss_pred ----CCcEEEeccCCCCCC-----CCCCccccchhhcccC-CCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHH
Q 004979 570 ----DYAAKISDFSFWNNT-----TAAKTGSAAMELLETS-AVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEY 639 (721)
Q Consensus 570 ----~~~~kL~DFGla~~~-----~~~~~~~~apE~~~~~-~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~ 639 (721)
...+||+|||++... ..++..|+|||.+... .++.++|||||||++|||++|+.++... . . ....
T Consensus 166 ~~~~~~~~kl~Dfg~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~--~--~-~~~~ 240 (289)
T 1x8b_A 166 WASNKVMFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNG--D--Q-WHEI 240 (289)
T ss_dssp ----CCCEEECCCTTCEETTCSCCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSS--H--H-HHHH
T ss_pred ccCCceEEEEcccccccccCCccccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcch--h--H-HHHH
Confidence 448999999987533 2356679999998765 5668999999999999999998776322 1 1 1112
Q ss_pred hhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004979 640 LKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 688 (721)
Q Consensus 640 ~~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 688 (721)
..+. ....+..++.++.+++.+||+.||++||++.|+++
T Consensus 241 ~~~~----------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 279 (289)
T 1x8b_A 241 RQGR----------LPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVK 279 (289)
T ss_dssp HTTC----------CCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HcCC----------CCCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence 2111 11122334577899999999999999999999975
No 169
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=6.3e-38 Score=326.49 Aligned_cols=247 Identities=18% Similarity=0.268 Sum_probs=197.2
Q ss_pred hhhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEEE
Q 004979 429 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 507 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~l 507 (721)
+++++.+|+|+||+||+|+.. +++.|++|++..... .....+.+.+|++++++++||||+++++++.+......++
T Consensus 8 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 8 YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSM---TEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTC---CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred eeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccC---CHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 367788999999999999965 688899998875432 2334567999999999999999999999886543336799
Q ss_pred EEecCCCCChhhhhhhc--cCCCCCHHHHHHHHHHHHHHHHHHhcCC---CCeEeeCCCCCCeEeCCCCcEEEeccCCCC
Q 004979 508 VFEYSPNGSLFEHLHIQ--EAEHLDWAMRLRIAMGMAYCLEHMHQLT---PPIAHRNLQSSSIYLTEDYAAKISDFSFWN 582 (721)
Q Consensus 508 V~Ey~~~GsL~~~l~~~--~~~~l~~~~~~~ia~~ia~gL~yLH~~~---~~IvHrDLKp~NILl~~~~~~kL~DFGla~ 582 (721)
||||+++|+|.+++... ....+++..+..++.|++.||+|||+.+ .+|+||||||+|||++.++.+||+|||+++
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~ 164 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR 164 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHH
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchhe
Confidence 99999999999998643 2345999999999999999999999865 349999999999999999999999999875
Q ss_pred CCC---------CCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCccccCCc
Q 004979 583 NTT---------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPT 653 (721)
Q Consensus 583 ~~~---------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 653 (721)
... .++..|+|||.+.+..++.++||||||+++|||+||+.||... +..+....+..+..+
T Consensus 165 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~--~~~~~~~~i~~~~~~-------- 234 (279)
T 2w5a_A 165 ILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAF--SQKELAGKIREGKFR-------- 234 (279)
T ss_dssp HC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHTCCC--------
T ss_pred eeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCccc--CHHHHHHHHhhcccc--------
Confidence 432 2355799999999889999999999999999999999999643 233333333333211
Q ss_pred cccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 004979 654 LKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKL 690 (721)
Q Consensus 654 l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L 690 (721)
..+..++.++.+++.+||+.||++||++.||++.+
T Consensus 235 --~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~ 269 (279)
T 2w5a_A 235 --RIPYRYSDELNEIITRMLNLKDYHRPSVEEILENP 269 (279)
T ss_dssp --CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTST
T ss_pred --cCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhCh
Confidence 12234457789999999999999999999998754
No 170
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=2.9e-37 Score=322.68 Aligned_cols=239 Identities=18% Similarity=0.316 Sum_probs=196.4
Q ss_pred hhhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEEE
Q 004979 429 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 507 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~l 507 (721)
+++.+.+|+|+||.||+|+.. ++..|++|++....... ......+.+|++++++++||||+++++++.+.+ ..++
T Consensus 16 y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~l 91 (284)
T 2vgo_A 16 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEK--EGVEHQLRREIEIQSHLRHPNILRMYNYFHDRK--RIYL 91 (284)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHH--TTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEE
T ss_pred ceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccch--HHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCC--EEEE
Confidence 367788999999999999965 56789999886432111 122467899999999999999999999998876 6799
Q ss_pred EEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCC---
Q 004979 508 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT--- 584 (721)
Q Consensus 508 V~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~--- 584 (721)
||||+++|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++...
T Consensus 92 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~ 167 (284)
T 2vgo_A 92 MLEFAPRGELYKELQKH--GRFDEQRSATFMEELADALHYCHERK--VIHRDIKPENLLMGYKGELKIADFGWSVHAPSL 167 (284)
T ss_dssp EECCCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTTT--EECCCCSGGGEEECTTCCEEECCCTTCEECSSS
T ss_pred EEEeCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC--ceecCCCHHHEEEcCCCCEEEecccccccCccc
Confidence 99999999999998643 45899999999999999999999988 999999999999999999999999987432
Q ss_pred ----CCCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHH
Q 004979 585 ----TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQEN 660 (721)
Q Consensus 585 ----~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 660 (721)
..++..|+|||.+.+..++.++||||||+++|||++|+.||... ...+........... ++..
T Consensus 168 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~--~~~~~~~~~~~~~~~-----------~~~~ 234 (284)
T 2vgo_A 168 RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSP--SHTETHRRIVNVDLK-----------FPPF 234 (284)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCS--SHHHHHHHHHTTCCC-----------CCTT
T ss_pred ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCC--CHhHHHHHHhccccC-----------CCCc
Confidence 23456789999999999999999999999999999999999643 233333333332211 1223
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004979 661 VLEELLVVIKNCVHPDPKQRPSMRGIAA 688 (721)
Q Consensus 661 ~~~~l~~li~~Cl~~dP~~RPs~~evl~ 688 (721)
.+.++.+++.+||+.||++||++.|+++
T Consensus 235 ~~~~~~~li~~~l~~~p~~Rps~~~ll~ 262 (284)
T 2vgo_A 235 LSDGSKDLISKLLRYHPPQRLPLKGVME 262 (284)
T ss_dssp SCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CCHHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence 4567889999999999999999999987
No 171
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=1.9e-37 Score=339.48 Aligned_cols=240 Identities=22% Similarity=0.294 Sum_probs=191.9
Q ss_pred hhhhCcCCCCceeEEEEEEecCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCC--CCccceEeEEEecCCCceEE
Q 004979 429 SNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN--HKNFVNLIGYCEEDEPFTRM 506 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~--H~nIv~l~g~~~~~~~~~~~ 506 (721)
|++++.||+|+||+||+|...++..||||++..... .....+.+.+|+++|.+++ |||||++++++...+ ..+
T Consensus 58 y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~--~~~ 132 (390)
T 2zmd_A 58 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEA---DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ--YIY 132 (390)
T ss_dssp EEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTC---CHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS--EEE
T ss_pred eEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccc---cHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCC--EEE
Confidence 467889999999999999988899999999875432 2334578999999999996 599999999998877 679
Q ss_pred EEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCC--
Q 004979 507 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT-- 584 (721)
Q Consensus 507 lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~-- 584 (721)
+||| +.+|+|.+++.. ...+++..+..|+.||+.||+|||+.+ |+||||||+|||++ ++.+||+|||+++..
T Consensus 133 lv~E-~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~lH~~~--ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~ 206 (390)
T 2zmd_A 133 MVME-CGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIHQHG--IVHSDLKPANFLIV-DGMLKLIDFGIANQMQP 206 (390)
T ss_dssp EEEE-CCSEEHHHHHHH--CSSCCHHHHHHHHHHHHHHHHHHHTTT--CCCCCCCGGGEEES-SSCEEECCCSSSCCC--
T ss_pred EEEe-cCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC--eeecCCCHHHEEEE-CCeEEEEecCccccccC
Confidence 9999 568899999864 346899999999999999999999998 99999999999996 589999999998643
Q ss_pred ---------CCCCccccchhhccc-----------CCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCC
Q 004979 585 ---------TAAKTGSAAMELLET-----------SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQ 644 (721)
Q Consensus 585 ---------~~~~~~~~apE~~~~-----------~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~ 644 (721)
..++..|+|||.+.. ..++.++|||||||++|||+||+.||..... .............
T Consensus 207 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~-~~~~~~~~~~~~~ 285 (390)
T 2zmd_A 207 DTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-QISKLHAIIDPNH 285 (390)
T ss_dssp -------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCC-HHHHHHHHHCTTS
T ss_pred CCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhH-HHHHHHHHhCccc
Confidence 235667999999864 4689999999999999999999999964322 2222333332211
Q ss_pred CCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004979 645 PLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 689 (721)
Q Consensus 645 ~~~~~~d~~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 689 (721)
.. .++...+.++.+|+.+||+.||++||++.|+++.
T Consensus 286 ~~---------~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 286 EI---------EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp CC---------CCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cC---------CCCccchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 10 1111224578899999999999999999999864
No 172
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=4e-38 Score=336.82 Aligned_cols=248 Identities=17% Similarity=0.229 Sum_probs=186.3
Q ss_pred hhhhCcCCCCceeEEEEEEe-cCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEEE
Q 004979 429 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 507 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~-~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~l 507 (721)
+++++.+|+|+||+||+|+. .+++.||||++..... .....+.+.+|++++++++||||+++++++.+.+ ..++
T Consensus 36 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~l 110 (329)
T 3gbz_A 36 YRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHE---EEGVPGTAIREVSLLKELQHRNIIELKSVIHHNH--RLHL 110 (329)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC-----------CHHHHHHGGGCCCTTBCCEEEEEEETT--EEEE
T ss_pred EEEEEEEEecCCeEEEEEEECCCCceEEEEEEccccc---ccccchhHHHHHHHHHHcCCCCcceEEEEEecCC--EEEE
Confidence 47788999999999999985 4788899998865432 1233456889999999999999999999999877 6799
Q ss_pred EEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEe-----CCCCcEEEeccCCCC
Q 004979 508 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYL-----TEDYAAKISDFSFWN 582 (721)
Q Consensus 508 V~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl-----~~~~~~kL~DFGla~ 582 (721)
||||++ |+|.+++.. ...+++..+..|+.||+.||+|||+++ |+||||||+|||+ ++++.+||+|||+++
T Consensus 111 v~e~~~-~~L~~~~~~--~~~~~~~~~~~i~~ql~~~l~~LH~~~--ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~ 185 (329)
T 3gbz_A 111 IFEYAE-NDLKKYMDK--NPDVSMRVIKSFLYQLINGVNFCHSRR--CLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR 185 (329)
T ss_dssp EEECCS-EEHHHHHHH--CTTCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEEEC-----CCEEEECCTTHHH
T ss_pred EEecCC-CCHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHhCC--EECCCCCHHHEEEecCCCCccceEEECcCCCcc
Confidence 999997 599999864 346899999999999999999999998 9999999999999 455669999999874
Q ss_pred CC---------CCCCccccchhhcccC-CCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCC-CCcc---
Q 004979 583 NT---------TAAKTGSAAMELLETS-AVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQ-PLKD--- 648 (721)
Q Consensus 583 ~~---------~~~~~~~~apE~~~~~-~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~-~~~~--- 648 (721)
.. ..++..|+|||.+.+. .++.++|||||||++|||+||+.||.... ..+.......... +...
T Consensus 186 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~--~~~~~~~~~~~~~~~~~~~~~ 263 (329)
T 3gbz_A 186 AFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDS--EIDQLFKIFEVLGLPDDTTWP 263 (329)
T ss_dssp HHC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHHHHHCCCCTTTST
T ss_pred ccCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCC--HHHHHHHHHHHhCCCchhhhh
Confidence 22 1235679999998764 58999999999999999999999996432 2222222221100 0000
Q ss_pred --------------ccCCccc-cccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004979 649 --------------IVDPTLK-SFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 688 (721)
Q Consensus 649 --------------~~d~~l~-~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 688 (721)
.....+. ........++.+|+.+||+.||++|||+.|+++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 264 GVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp TGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 0000000 011224578899999999999999999999975
No 173
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=4.6e-38 Score=337.29 Aligned_cols=235 Identities=18% Similarity=0.277 Sum_probs=191.1
Q ss_pred hhhhCcCCCCceeEEEEEEe-cCCcEEEEEEeeeccccch---hhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCce
Q 004979 429 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADW---SKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFT 504 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~-~~~~~vavk~~~~~~~~~~---~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~ 504 (721)
+++++.+|+|+||+||+|+. .++..||||++........ .......+.+|++++++++||||+++++++.+.+ .
T Consensus 26 y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~--~ 103 (335)
T 3dls_A 26 YSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQG--F 103 (335)
T ss_dssp EEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSS--E
T ss_pred eEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCC--E
Confidence 47888999999999999985 4678899998875432110 0112245778999999999999999999998877 6
Q ss_pred EEEEEecCCCC-ChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCC
Q 004979 505 RMMVFEYSPNG-SLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN 583 (721)
Q Consensus 505 ~~lV~Ey~~~G-sL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~ 583 (721)
.++||||+.+| +|.+++.. ...+++..+..|+.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 104 ~~lv~e~~~~g~~l~~~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~--ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~ 179 (335)
T 3dls_A 104 FQLVMEKHGSGLDLFAFIDR--HPRLDEPLASYIFRQLVSAVGYLRLKD--IIHRDIKDENIVIAEDFTIKLIDFGSAAY 179 (335)
T ss_dssp EEEEEECCTTSCBHHHHHHT--CCCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EEEEEEeCCCCccHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC--eEEeccCHHHEEEcCCCcEEEeecccceE
Confidence 79999999877 99999863 456999999999999999999999998 99999999999999999999999999864
Q ss_pred CC--------CCCccccchhhcccCCC-CCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcc
Q 004979 584 TT--------AAKTGSAAMELLETSAV-DLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTL 654 (721)
Q Consensus 584 ~~--------~~~~~~~apE~~~~~~~-s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 654 (721)
.. .++..|+|||.+.+..+ +.++|||||||++|||++|+.||..... .. ....
T Consensus 180 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~--------~~------~~~~---- 241 (335)
T 3dls_A 180 LERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE--------TV------EAAI---- 241 (335)
T ss_dssp CCTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG--------GT------TTCC----
T ss_pred CCCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH--------HH------hhcc----
Confidence 32 24568999999988776 7899999999999999999999953111 00 0000
Q ss_pred ccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004979 655 KSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 688 (721)
Q Consensus 655 ~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 688 (721)
..+..++.++.+++.+||+.||++||++.|+++
T Consensus 242 -~~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~ 274 (335)
T 3dls_A 242 -HPPYLVSKELMSLVSGLLQPVPERRTTLEKLVT 274 (335)
T ss_dssp -CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred -CCCcccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 011224567899999999999999999999987
No 174
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=1.5e-37 Score=331.84 Aligned_cols=248 Identities=22% Similarity=0.331 Sum_probs=197.3
Q ss_pred hhhhCcCCCCceeEEEEEEe------cCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCC
Q 004979 429 SNIIGSFSDGTVGTVYKGTL------SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEP 502 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~------~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~ 502 (721)
+++++.+|+|+||.||+|++ .++..||||++.... ......++.+|+.++++++||||+++++++.+.+
T Consensus 32 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~- 106 (327)
T 2yfx_A 32 ITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC----SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSL- 106 (327)
T ss_dssp CEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSC----CHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-
T ss_pred eEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEecccc----chhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCC-
Confidence 46788999999999999984 246789999885332 2334567999999999999999999999998876
Q ss_pred ceEEEEEecCCCCChhhhhhhccC-----CCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCC---CCcEE
Q 004979 503 FTRMMVFEYSPNGSLFEHLHIQEA-----EHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTE---DYAAK 574 (721)
Q Consensus 503 ~~~~lV~Ey~~~GsL~~~l~~~~~-----~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~---~~~~k 574 (721)
..++||||+++|+|.+++..... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++. +..+|
T Consensus 107 -~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~--i~H~dlkp~NIli~~~~~~~~~k 183 (327)
T 2yfx_A 107 -PRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAK 183 (327)
T ss_dssp -SCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEESCSSTTCCEE
T ss_pred -CcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC--eecCcCCHhHEEEecCCCcceEE
Confidence 56999999999999999975432 45899999999999999999999998 999999999999994 45699
Q ss_pred EeccCCCCCC-----------CCCCccccchhhcccCCCCCCccHHHHHHHHHHHHh-CCCcccCCCCCHHHHHHHHhhc
Q 004979 575 ISDFSFWNNT-----------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKG 642 (721)
Q Consensus 575 L~DFGla~~~-----------~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~Ellt-G~~P~~~~~~~~~~~~~~~~~~ 642 (721)
|+|||+++.. ..++..|+|||.+....++.++|||||||++|||+| |+.||... ...+.......+
T Consensus 184 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~--~~~~~~~~~~~~ 261 (327)
T 2yfx_A 184 IGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK--SNQEVLEFVTSG 261 (327)
T ss_dssp ECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC--CHHHHHHHHHTT
T ss_pred ECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCc--CHHHHHHHHhcC
Confidence 9999986421 122446999999988999999999999999999999 99999633 333333333322
Q ss_pred CCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhc
Q 004979 643 EQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAM 696 (721)
Q Consensus 643 ~~~~~~~~d~~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~i~~~ 696 (721)
... ..+..++.++.+++.+||+.||++||++.|+++.|+.+...
T Consensus 262 ~~~----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~ 305 (327)
T 2yfx_A 262 GRM----------DPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 305 (327)
T ss_dssp CCC----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred CCC----------CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcC
Confidence 111 11233456789999999999999999999999999987664
No 175
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=3.6e-37 Score=320.05 Aligned_cols=240 Identities=20% Similarity=0.314 Sum_probs=194.6
Q ss_pred hhhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEEE
Q 004979 429 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 507 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~l 507 (721)
+++++.+|+|+||.||+|+.. ++..|++|++..... ....+.+.+|++++++++||||+++++++.+.+ ..++
T Consensus 9 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~l 82 (276)
T 2yex_A 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA----VDCPENIKKEICINKMLNHENVVKFYGHRREGN--IQYL 82 (276)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGC----TTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT--EEEE
T ss_pred eEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccc----hhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCC--EEEE
Confidence 377888999999999999965 688999998865432 223467899999999999999999999998876 6799
Q ss_pred EEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCC---
Q 004979 508 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT--- 584 (721)
Q Consensus 508 V~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~--- 584 (721)
||||+++|+|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++...
T Consensus 83 v~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~ 158 (276)
T 2yex_A 83 FLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVVYLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYN 158 (276)
T ss_dssp EEECCTTEEGGGGSBT--TTBCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECTTCCEEECCCTTCEECEET
T ss_pred EEEecCCCcHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHHhCC--eeccCCChHHEEEccCCCEEEeeCCCccccCCC
Confidence 9999999999999853 356899999999999999999999998 999999999999999999999999987532
Q ss_pred --------CCCCccccchhhcccCCC-CCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccc
Q 004979 585 --------TAAKTGSAAMELLETSAV-DLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLK 655 (721)
Q Consensus 585 --------~~~~~~~~apE~~~~~~~-s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 655 (721)
..++..|+|||.+....+ +.++|||||||++|||+||+.||.........+. .........
T Consensus 159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~-~~~~~~~~~--------- 228 (276)
T 2yex_A 159 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS-DWKEKKTYL--------- 228 (276)
T ss_dssp TEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHH-HHHTTCTTS---------
T ss_pred cchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHH-Hhhhccccc---------
Confidence 224567999999977665 7889999999999999999999975443322221 111111100
Q ss_pred cccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004979 656 SFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 688 (721)
Q Consensus 656 ~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 688 (721)
......+.++.+++.+||+.||++|||+.|+++
T Consensus 229 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 229 NPWKKIDSAPLALLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CchhhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence 011234567889999999999999999999875
No 176
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=3.7e-37 Score=344.58 Aligned_cols=249 Identities=17% Similarity=0.226 Sum_probs=190.2
Q ss_pred hhhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCC----c
Q 004979 429 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEP----F 503 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~----~ 503 (721)
|++++.+|+|+||+||+|+.. +++.||||++..... .....+++.+|+++|+.++|||||++++++...+. .
T Consensus 64 y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~---~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 64 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ---NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGG---SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred eEEEEEeecCCCeEEEEEEECCCCCEEEEEEECcccc---ChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 467788999999999999854 688899999864321 23345678999999999999999999999975432 2
Q ss_pred eEEEEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCC
Q 004979 504 TRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN 583 (721)
Q Consensus 504 ~~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~ 583 (721)
..|+||||+++ +|.+.+. ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 141 ~~~lv~E~~~~-~l~~~~~----~~l~~~~~~~~~~qil~aL~~lH~~~--iiHrDlkp~NIll~~~~~~kl~DFG~a~~ 213 (464)
T 3ttj_A 141 DVYLVMELMDA-NLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLART 213 (464)
T ss_dssp EEEEEEECCSE-EHHHHHT----SCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTSCEEECCCCCC--
T ss_pred eEEEEEeCCCC-CHHHHHh----hcCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCChHhEEEeCCCCEEEEEEEeeee
Confidence 57999999976 4666653 34899999999999999999999998 99999999999999999999999999864
Q ss_pred CC--------CCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcC-CCCcc------
Q 004979 584 TT--------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGE-QPLKD------ 648 (721)
Q Consensus 584 ~~--------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~-~~~~~------ 648 (721)
.. .++..|+|||.+.+..|+.++||||+||++|||++|+.||.+.+ ..+....++... .+..+
T Consensus 214 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~--~~~~~~~i~~~lg~p~~~~~~~~~ 291 (464)
T 3ttj_A 214 AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRD--YIDQWNKVIEQLGTPCPEFMKKLQ 291 (464)
T ss_dssp ---CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHHHHHCSCCHHHHTTSC
T ss_pred cCCCcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHHhcCCCCHHHHHHcc
Confidence 32 34567999999999999999999999999999999999996432 222222221100 00000
Q ss_pred --------------------ccCCc----cccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004979 649 --------------------IVDPT----LKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 689 (721)
Q Consensus 649 --------------------~~d~~----l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 689 (721)
..... ..........++.+|+.+||+.||++|||++|+++.
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 292 PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp HHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred hhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00000 001112236789999999999999999999999873
No 177
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=8.7e-38 Score=327.33 Aligned_cols=250 Identities=22% Similarity=0.344 Sum_probs=192.7
Q ss_pred hhhhCcCCCCceeEEEEEEec--CCc--EEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCce
Q 004979 429 SNIIGSFSDGTVGTVYKGTLS--SGV--EIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFT 504 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~~--~~~--~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~ 504 (721)
+++++.+|+|+||+||+|++. ++. .|+||++...... .....+.+.+|++++++++||||+++++++....
T Consensus 20 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--- 94 (291)
T 1u46_A 20 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLS--QPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP--- 94 (291)
T ss_dssp EEEEEECC----CCCEEEEEECTTSCEEEEEEEC----------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS---
T ss_pred eeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccC--CHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC---
Confidence 367889999999999999863 233 5788877543221 1234578999999999999999999999998754
Q ss_pred EEEEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCC
Q 004979 505 RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT 584 (721)
Q Consensus 505 ~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~ 584 (721)
.++||||+++|+|.+++... ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 95 ~~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dikp~Nili~~~~~~kl~Dfg~~~~~ 171 (291)
T 1u46_A 95 MKMVTELAPLGSLLDRLRKH-QGHFLLGTLSRYAVQVAEGMGYLESKR--FIHRDLAARNLLLATRDLVKIGDFGLMRAL 171 (291)
T ss_dssp CEEEEECCTTCBHHHHHHHH-GGGSCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEEEETTEEEECCCTTCEEC
T ss_pred ceeeEecccCCCHHHHHHhc-cCCcCHHHHHHHHHHHHHHHHHHHhCC--cccCCCchheEEEcCCCCEEEccccccccc
Confidence 58999999999999998643 345899999999999999999999998 999999999999999999999999987543
Q ss_pred CC------------CCccccchhhcccCCCCCCccHHHHHHHHHHHHh-CCCcccCCCCCHHHHHHHHhhcCCCCccccC
Q 004979 585 TA------------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVD 651 (721)
Q Consensus 585 ~~------------~~~~~~apE~~~~~~~s~ksDVwSfGvvL~Ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d 651 (721)
.. ++..|+|||.+....++.++||||||+++|||+| |+.||... +..+............
T Consensus 172 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~--~~~~~~~~~~~~~~~~----- 244 (291)
T 1u46_A 172 PQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGL--NGSQILHKIDKEGERL----- 244 (291)
T ss_dssp CC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTC--CHHHHHHHHHTSCCCC-----
T ss_pred cccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccC--CHHHHHHHHHccCCCC-----
Confidence 21 2235899999988889999999999999999999 99999633 3344444443322111
Q ss_pred CccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcC
Q 004979 652 PTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAME 697 (721)
Q Consensus 652 ~~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 697 (721)
..+..++.++.+++.+||+.||++||++.|+++.|+++....
T Consensus 245 ----~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 286 (291)
T 1u46_A 245 ----PRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTD 286 (291)
T ss_dssp ----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC---
T ss_pred ----CCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCccc
Confidence 112345577999999999999999999999999999876544
No 178
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=7.5e-37 Score=322.89 Aligned_cols=240 Identities=18% Similarity=0.262 Sum_probs=196.1
Q ss_pred hhhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEEE
Q 004979 429 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 507 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~l 507 (721)
+.+++.+|+|+||+||+|+.. +++.||+|++..... ...+.+.+|++++++++||||+++++++.+.+ ..++
T Consensus 11 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~l 83 (304)
T 2jam_A 11 FIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPA-----FRDSSLENEIAVLKKIKHENIVTLEDIYESTT--HYYL 83 (304)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC-----------HHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEE
T ss_pred ceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccc-----cchHHHHHHHHHHHhCCCCCeeehhhhcccCC--EEEE
Confidence 467888999999999999965 688999998874321 12356889999999999999999999998876 6799
Q ss_pred EEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEe---CCCCcEEEeccCCCCCC
Q 004979 508 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYL---TEDYAAKISDFSFWNNT 584 (721)
Q Consensus 508 V~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl---~~~~~~kL~DFGla~~~ 584 (721)
||||+++|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+|||+ ++++.+||+|||+++..
T Consensus 84 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~ 159 (304)
T 2jam_A 84 VMQLVSGGELFDRILER--GVYTEKDASLVIQQVLSAVKYLHENG--IVHRDLKPENLLYLTPEENSKIMITDFGLSKME 159 (304)
T ss_dssp EECCCCSCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCC
T ss_pred EEEcCCCccHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCCHHHEEEecCCCCCCEEEccCCcceec
Confidence 99999999999998643 46899999999999999999999998 9999999999999 78899999999998654
Q ss_pred CC-------CCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccc
Q 004979 585 TA-------AKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSF 657 (721)
Q Consensus 585 ~~-------~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 657 (721)
.. ++..|+|||.+.+..++.++|||||||++|||+||+.||... ...+....+..+...... ..
T Consensus 160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~--~~~~~~~~i~~~~~~~~~-------~~ 230 (304)
T 2jam_A 160 QNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEE--TESKLFEKIKEGYYEFES-------PF 230 (304)
T ss_dssp CCBTTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTS--CHHHHHHHHHHCCCCCCT-------TT
T ss_pred CCCccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCC--CHHHHHHHHHcCCCCCCc-------cc
Confidence 33 456799999999999999999999999999999999999643 333344444333221111 11
Q ss_pred cHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004979 658 QENVLEELLVVIKNCVHPDPKQRPSMRGIAA 688 (721)
Q Consensus 658 ~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 688 (721)
....+.++.+++.+||+.||++||++.|+++
T Consensus 231 ~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (304)
T 2jam_A 231 WDDISESAKDFICHLLEKDPNERYTCEKALS 261 (304)
T ss_dssp TTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred cccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 2334567899999999999999999999986
No 179
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=1.4e-37 Score=334.30 Aligned_cols=239 Identities=19% Similarity=0.308 Sum_probs=193.5
Q ss_pred hhhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcC-CCCccceEeEEEecCCCceEE
Q 004979 429 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPFTRM 506 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l-~H~nIv~l~g~~~~~~~~~~~ 506 (721)
+++++.+|+|+||+||+|+.. +++.+|+|++..... .+.+|++++.++ +|||||++++++.+.+ ..+
T Consensus 24 y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~---------~~~~E~~~l~~~~~hp~iv~~~~~~~~~~--~~~ 92 (342)
T 2qr7_A 24 YEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR---------DPTEEIEILLRYGQHPNIITLKDVYDDGK--YVY 92 (342)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC---------CCHHHHHHHHHHTTSTTBCCEEEEEECSS--EEE
T ss_pred EEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC---------ChHHHHHHHHHhcCCCCcCeEEEEEEcCC--EEE
Confidence 477889999999999999965 678899998864321 245688888887 7999999999998876 779
Q ss_pred EEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCC----CcEEEeccCCCC
Q 004979 507 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTED----YAAKISDFSFWN 582 (721)
Q Consensus 507 lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~----~~~kL~DFGla~ 582 (721)
+||||+++|+|.+++.. ...+++..+..++.||+.||+|||+.+ |+||||||+|||+.++ +.+||+|||+++
T Consensus 93 lv~E~~~gg~L~~~i~~--~~~~~~~~~~~~~~qi~~al~~lH~~g--ivHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~ 168 (342)
T 2qr7_A 93 VVTELMKGGELLDKILR--QKFFSEREASAVLFTITKTVEYLHAQG--VVHRDLKPSNILYVDESGNPESIRICDFGFAK 168 (342)
T ss_dssp EEECCCCSCBHHHHHHT--CTTCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEESSSSCSGGGEEECCCTTCE
T ss_pred EEEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC--cEeccCCHHHEEEecCCCCcCeEEEEECCCcc
Confidence 99999999999999863 356999999999999999999999998 9999999999998543 359999999976
Q ss_pred CC---------CCCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCC-CCHHHHHHHHhhcCCCCccccCC
Q 004979 583 NT---------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIEN-GSLENWASEYLKGEQPLKDIVDP 652 (721)
Q Consensus 583 ~~---------~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~-~~~~~~~~~~~~~~~~~~~~~d~ 652 (721)
.. ..++..|+|||.+.+..++.++|||||||++|||++|+.||.... ....+....+..+......
T Consensus 169 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~---- 244 (342)
T 2qr7_A 169 QLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSG---- 244 (342)
T ss_dssp ECBCTTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCCCCCS----
T ss_pred cCcCCCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCcccCc----
Confidence 32 224567999999988889999999999999999999999997543 3444555554444322111
Q ss_pred ccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004979 653 TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 689 (721)
Q Consensus 653 ~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 689 (721)
......+.++.+|+.+||+.||++||++.|+++.
T Consensus 245 ---~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~h 278 (342)
T 2qr7_A 245 ---GYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRH 278 (342)
T ss_dssp ---TTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred ---cccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 1123345778999999999999999999999863
No 180
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=1e-37 Score=335.83 Aligned_cols=271 Identities=14% Similarity=0.180 Sum_probs=210.0
Q ss_pred hhhhCcCCCCceeEEEEEEecCCcEEEEEEeeeccccchh------------hHHHHHHHHHHHHHhcCCCCccceEeEE
Q 004979 429 SNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWS------------KNLESQFRKKIDTLSKVNHKNFVNLIGY 496 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~~~~~~vavk~~~~~~~~~~~------------~~~~~~f~~Ei~~l~~l~H~nIv~l~g~ 496 (721)
+++++.+|+|+||.||+|+. ++..||+|++......... ....+.+.+|++++++++||||++++++
T Consensus 33 y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~ 111 (348)
T 2pml_X 33 YRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGI 111 (348)
T ss_dssp EEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCSEE
T ss_pred eEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEEEE
Confidence 36778899999999999999 8999999998654221100 0112679999999999999999999999
Q ss_pred EecCCCceEEEEEecCCCCChhhh------hhhccCCCCCHHHHHHHHHHHHHHHHHHhc-CCCCeEeeCCCCCCeEeCC
Q 004979 497 CEEDEPFTRMMVFEYSPNGSLFEH------LHIQEAEHLDWAMRLRIAMGMAYCLEHMHQ-LTPPIAHRNLQSSSIYLTE 569 (721)
Q Consensus 497 ~~~~~~~~~~lV~Ey~~~GsL~~~------l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~-~~~~IvHrDLKp~NILl~~ 569 (721)
+.+.+ ..++||||+++|+|.++ +.......+++..+..++.|++.||+|||+ .+ |+||||||+|||++.
T Consensus 112 ~~~~~--~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~--i~H~dl~p~Nil~~~ 187 (348)
T 2pml_X 112 ITNYD--EVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKN--ICHRDVKPSNILMDK 187 (348)
T ss_dssp EESSS--EEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSC--EECCCCCGGGEEECT
T ss_pred EeeCC--eEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCC--EeecCCChHhEEEcC
Confidence 99876 67999999999999998 654335779999999999999999999998 88 999999999999999
Q ss_pred CCcEEEeccCCCCCC-------CCCCccccchhhcccC-CCCC-CccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHh
Q 004979 570 DYAAKISDFSFWNNT-------TAAKTGSAAMELLETS-AVDL-ESNVYSFGTILFEMITGRISYSIENGSLENWASEYL 640 (721)
Q Consensus 570 ~~~~kL~DFGla~~~-------~~~~~~~~apE~~~~~-~~s~-ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~ 640 (721)
++.+||+|||++... ..++..|+|||.+.+. .++. ++|||||||++|||+||+.||...... .+....+.
T Consensus 188 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~~~~i~ 266 (348)
T 2pml_X 188 NGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL-VELFNNIR 266 (348)
T ss_dssp TSCEEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS-HHHHHHHT
T ss_pred CCcEEEeccccccccccccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH-HHHHHHHh
Confidence 999999999987642 2345679999999876 6666 999999999999999999999744332 33344433
Q ss_pred hcCCCCccccC----C----ccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCChhHHHH
Q 004979 641 KGEQPLKDIVD----P----TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPDGATPKLSPLWWAE 712 (721)
Q Consensus 641 ~~~~~~~~~~d----~----~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~p~~~~~~~~~ 712 (721)
.+......... + .........+.++.+++.+||+.||++||++.|+++ +|.+....|++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~-------------hp~f~~~~~~~ 333 (348)
T 2pml_X 267 TKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK-------------HEWLADTNIED 333 (348)
T ss_dssp SCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT-------------SGGGTTCCHHH
T ss_pred ccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc-------------CccccCCCHHH
Confidence 33222111000 0 000011345678899999999999999999999986 57777777877
Q ss_pred HHhhhc
Q 004979 713 LEILSS 718 (721)
Q Consensus 713 l~~~~~ 718 (721)
++-+..
T Consensus 334 ~~~~~~ 339 (348)
T 2pml_X 334 LREFSK 339 (348)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 765543
No 181
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=2.1e-37 Score=342.35 Aligned_cols=246 Identities=20% Similarity=0.271 Sum_probs=188.5
Q ss_pred hhhhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccch---hhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCc
Q 004979 428 FSNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADW---SKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPF 503 (721)
Q Consensus 428 ~~~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~---~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~ 503 (721)
.+.+.+.+|+|+||+||+|+.. ++..||||++..+..... .......+.+|+++|++++|||||++++++...
T Consensus 136 ~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~--- 212 (419)
T 3i6u_A 136 EYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE--- 212 (419)
T ss_dssp TEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEESS---
T ss_pred cEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEecC---
Confidence 3477888999999999999864 678999999875432111 111223588999999999999999999998654
Q ss_pred eEEEEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCC---CcEEEeccCC
Q 004979 504 TRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTED---YAAKISDFSF 580 (721)
Q Consensus 504 ~~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~---~~~kL~DFGl 580 (721)
..++||||+++|+|.+++. ....+++..+..|+.|++.||+|||+++ |+||||||+|||++.+ +.+||+|||+
T Consensus 213 ~~~lv~e~~~~g~L~~~l~--~~~~~~~~~~~~i~~qi~~~l~~LH~~~--ivHrDlkp~NIll~~~~~~~~~kl~DFG~ 288 (419)
T 3i6u_A 213 DYYIVLELMEGGELFDKVV--GNKRLKEATCKLYFYQMLLAVQYLHENG--IIHRDLKPENVLLSSQEEDCLIKITDFGH 288 (419)
T ss_dssp EEEEEEECCTTCBGGGGTS--SSCCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEESSSSSSCCEEECCSST
T ss_pred ceEEEEEcCCCCcHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCChHhEEEecCCCcceEEEeeccc
Confidence 4689999999999999885 3456999999999999999999999998 9999999999999754 4599999999
Q ss_pred CCCCC--------CCCccccchhhcc---cCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCccc
Q 004979 581 WNNTT--------AAKTGSAAMELLE---TSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDI 649 (721)
Q Consensus 581 a~~~~--------~~~~~~~apE~~~---~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 649 (721)
++... .++..|+|||.+. ...++.++|||||||++|||+||+.||....... ........+....
T Consensus 289 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~-~~~~~i~~~~~~~--- 364 (419)
T 3i6u_A 289 SKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV-SLKDQITSGKYNF--- 364 (419)
T ss_dssp TTSCC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSC-CHHHHHHTTCCCC---
T ss_pred ceecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchH-HHHHHHhcCCCCC---
Confidence 87532 2456899999975 4678899999999999999999999997432211 1111111111110
Q ss_pred cCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004979 650 VDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 688 (721)
Q Consensus 650 ~d~~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 688 (721)
........+.++.+++.+||+.||++||++.|+++
T Consensus 365 ----~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 399 (419)
T 3i6u_A 365 ----IPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 399 (419)
T ss_dssp ----CHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred ----CchhhcccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence 01111234578899999999999999999999987
No 182
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=6.6e-37 Score=328.47 Aligned_cols=252 Identities=21% Similarity=0.341 Sum_probs=199.0
Q ss_pred hhhhhhhCcCCCCceeEEEEEEecCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhc--CCCCccceEeEEEecCCC-
Q 004979 426 EDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSK--VNHKNFVNLIGYCEEDEP- 502 (721)
Q Consensus 426 ~~~~~ii~~lg~G~~g~Vyk~~~~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~--l~H~nIv~l~g~~~~~~~- 502 (721)
.+.+++.+.+|+|+||+||+|+.. ++.||||++.... ...+.+|++++.. ++||||+++++++...+.
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~--------~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~ 111 (342)
T 1b6c_B 41 ARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSRE--------ERSWFREAEIYQTVMLRHENILGFIAADNKDNGT 111 (342)
T ss_dssp HHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEECGGG--------HHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSS
T ss_pred cccEEEEeeecCCCCcEEEEEEEc-CccEEEEEeCchh--------HHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCc
Confidence 344578889999999999999984 8899999875321 2467788888887 799999999999987542
Q ss_pred -ceEEEEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHh--------cCCCCeEeeCCCCCCeEeCCCCcE
Q 004979 503 -FTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMH--------QLTPPIAHRNLQSSSIYLTEDYAA 573 (721)
Q Consensus 503 -~~~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH--------~~~~~IvHrDLKp~NILl~~~~~~ 573 (721)
...++||||+++|+|.+++.. ..+++..+..++.|++.||+||| +.+ |+||||||+|||++.++.+
T Consensus 112 ~~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~--ivH~Dlkp~NIll~~~~~~ 186 (342)
T 1b6c_B 112 WTQLWLVSDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA--IAHRDLKSKNILVKKNGTC 186 (342)
T ss_dssp CCCEEEEECCCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCE--EECSCCSGGGEEECTTSCE
T ss_pred cceeEEEEeecCCCcHHHHHhc---cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCC--eeeCCCCHHHEEECCCCCE
Confidence 156999999999999999963 35899999999999999999999 666 9999999999999999999
Q ss_pred EEeccCCCCCC-------------CCCCccccchhhcccC------CCCCCccHHHHHHHHHHHHhC----------CCc
Q 004979 574 KISDFSFWNNT-------------TAAKTGSAAMELLETS------AVDLESNVYSFGTILFEMITG----------RIS 624 (721)
Q Consensus 574 kL~DFGla~~~-------------~~~~~~~~apE~~~~~------~~s~ksDVwSfGvvL~ElltG----------~~P 624 (721)
||+|||+++.. ..++..|+|||.+... .++.++|||||||++|||+|| +.|
T Consensus 187 kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p 266 (342)
T 1b6c_B 187 CIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLP 266 (342)
T ss_dssp EECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCT
T ss_pred EEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccC
Confidence 99999987421 1345679999998765 234689999999999999999 778
Q ss_pred ccCCC---CCHHHHHHHHhhcCCCCccccCCcccc--ccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcC
Q 004979 625 YSIEN---GSLENWASEYLKGEQPLKDIVDPTLKS--FQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAME 697 (721)
Q Consensus 625 ~~~~~---~~~~~~~~~~~~~~~~~~~~~d~~l~~--~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 697 (721)
|.... .....+........ ..+.+.. ...++...+.+|+.+||+.||++||++.||++.|+++.+..
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~~ 338 (342)
T 1b6c_B 267 YYDLVPSDPSVEEMRKVVCEQK------LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 338 (342)
T ss_dssp TTTTSCSSCCHHHHHHHHTTSC------CCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred ccccCcCcccHHHHHHHHHHHH------hCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHHh
Confidence 76432 23333333332211 1111111 12467788999999999999999999999999999987754
No 183
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=1.9e-38 Score=345.87 Aligned_cols=237 Identities=11% Similarity=0.156 Sum_probs=184.2
Q ss_pred hhhhCcCCCCceeEEEEEEe-cCCcEEEEEEeeeccccchhhHHHHHHHHHH---HHHhcCCCCccceEe-------EEE
Q 004979 429 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKI---DTLSKVNHKNFVNLI-------GYC 497 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~-~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei---~~l~~l~H~nIv~l~-------g~~ 497 (721)
+++.+.+|+|+||+||+|+. .+++.||||++....... ....+.|.+|+ +++++++|||||+++ +++
T Consensus 75 y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~--~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~ 152 (377)
T 3byv_A 75 LVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPP--SNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 152 (377)
T ss_dssp EEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CC--TTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEE
T ss_pred EEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccc--hHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhh
Confidence 36678899999999999995 568999999987543222 23456799999 556666899999998 666
Q ss_pred ecCCC---------------ceEEEEEecCCCCChhhhhhhccC-----CCCCHHHHHHHHHHHHHHHHHHhcCCCCeEe
Q 004979 498 EEDEP---------------FTRMMVFEYSPNGSLFEHLHIQEA-----EHLDWAMRLRIAMGMAYCLEHMHQLTPPIAH 557 (721)
Q Consensus 498 ~~~~~---------------~~~~lV~Ey~~~GsL~~~l~~~~~-----~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvH 557 (721)
...+. ...++||||+ +|+|.+++..... ..+++..+..|+.||+.||+|||+++ |+|
T Consensus 153 ~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~--ivH 229 (377)
T 3byv_A 153 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG--LVH 229 (377)
T ss_dssp ECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTT--EEC
T ss_pred hccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCC--eec
Confidence 54421 0268999999 6899999974321 12446888899999999999999998 999
Q ss_pred eCCCCCCeEeCCCCcEEEeccCCCCCC------CCCCccccchhhcccC-----------CCCCCccHHHHHHHHHHHHh
Q 004979 558 RNLQSSSIYLTEDYAAKISDFSFWNNT------TAAKTGSAAMELLETS-----------AVDLESNVYSFGTILFEMIT 620 (721)
Q Consensus 558 rDLKp~NILl~~~~~~kL~DFGla~~~------~~~~~~~~apE~~~~~-----------~~s~ksDVwSfGvvL~Ellt 620 (721)
|||||+|||++.++.+||+|||+++.. ..+ ..|+|||.+.+. .++.++|||||||++|||+|
T Consensus 230 rDikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~ellt 308 (377)
T 3byv_A 230 TYLRPVDIVLDQRGGVFLTGFEHLVRDGARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWC 308 (377)
T ss_dssp SCCCGGGEEECTTCCEEECCGGGCEETTCEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHEEEcCCCCEEEEechhheecCCcccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHH
Confidence 999999999999999999999998642 234 789999999877 89999999999999999999
Q ss_pred CCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004979 621 GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 688 (721)
Q Consensus 621 G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 688 (721)
|+.||...... .....+.. ....++.++.+++.+||+.||++||++.|+++
T Consensus 309 g~~Pf~~~~~~------------~~~~~~~~-----~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 359 (377)
T 3byv_A 309 ADLPITKDAAL------------GGSEWIFR-----SCKNIPQPVRALLEGFLRYPKEDRLLPLQAME 359 (377)
T ss_dssp SSCCC------------------CCSGGGGS-----SCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred CCCCCcccccc------------cchhhhhh-----hccCCCHHHHHHHHHHcCCCchhCCCHHHHhh
Confidence 99999532210 11111111 11234567899999999999999999999986
No 184
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.3e-37 Score=333.96 Aligned_cols=255 Identities=19% Similarity=0.245 Sum_probs=192.3
Q ss_pred hhhhCcCCCCceeEEEEEEe-cCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCC----c
Q 004979 429 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEP----F 503 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~-~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~----~ 503 (721)
|++++.+|+|+||.||+|+. .+++.||||++..... .....+++.+|++++++++||||+++++++...+. .
T Consensus 27 y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~---~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 27 YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQ---SELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp EEEEEEC------CEEEEEETTTCCEEEEEECSSTTS---SHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred EEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCcccc---CHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 46778899999999999996 4789999998854321 23345678999999999999999999999976531 2
Q ss_pred eEEEEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCC
Q 004979 504 TRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN 583 (721)
Q Consensus 504 ~~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~ 583 (721)
..++||||+ +++|.+++.. ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~~~~qi~~~L~~LH~~~--ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 177 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKH---EKLGEDRIQFLVYQMLKGLRYIHAAG--IIHRDLKPGNLAVNEDCELKILDFGLARQ 177 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred eEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCcCHHHEEEcCCCCEEEEeeecccc
Confidence 459999999 8899999864 46899999999999999999999998 99999999999999999999999999864
Q ss_pred CC------CCCccccchhhccc-CCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCC-CC---------
Q 004979 584 TT------AAKTGSAAMELLET-SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQ-PL--------- 646 (721)
Q Consensus 584 ~~------~~~~~~~apE~~~~-~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~-~~--------- 646 (721)
.. .++..|+|||.+.+ ..++.++||||+||++|||++|+.||...+ ..+.+..+..... +.
T Consensus 178 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~--~~~~l~~i~~~~g~~~~~~~~~~~~ 255 (367)
T 1cm8_A 178 ADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSD--HLDQLKEIMKVTGTPPAEFVQRLQS 255 (367)
T ss_dssp CCSSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHHHHHCCCCHHHHHTCSC
T ss_pred cccccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHHhcCCCCHHHHHHhhh
Confidence 32 34557899999876 789999999999999999999999996432 2222222221100 00
Q ss_pred ----------ccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HHHhh
Q 004979 647 ----------KDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK--LKEIT 694 (721)
Q Consensus 647 ----------~~~~d~~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~--L~~i~ 694 (721)
...............+.++.+|+.+||+.||++|||+.|+++. ++++.
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~~~ 315 (367)
T 1cm8_A 256 DEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLH 315 (367)
T ss_dssp HHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred HHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChHHHhhc
Confidence 0001111122233456789999999999999999999999873 44443
No 185
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.2e-37 Score=335.41 Aligned_cols=253 Identities=17% Similarity=0.195 Sum_probs=189.9
Q ss_pred hhhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEEE
Q 004979 429 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 507 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~l 507 (721)
+++++.+|+|+||+||+|+.. +++.||||++.............+.+.+|++++++++||||+++++++.+.+ ..++
T Consensus 12 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~l 89 (346)
T 1ua2_A 12 YEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKS--NISL 89 (346)
T ss_dssp -CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTT--CCEE
T ss_pred cEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCC--ceEE
Confidence 467788999999999999964 6889999998754322222222356889999999999999999999998776 5699
Q ss_pred EEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCCC--
Q 004979 508 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT-- 585 (721)
Q Consensus 508 V~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~~-- 585 (721)
||||+++ +|.+++.. ....+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 90 v~e~~~~-~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~ 165 (346)
T 1ua2_A 90 VFDFMET-DLEVIIKD-NSLVLTPSHIKAYMLMTLQGLEYLHQHW--ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSP 165 (346)
T ss_dssp EEECCSE-EHHHHHTT-CCSSCCSSHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTCCEEECCCGGGSTTTSC
T ss_pred EEEcCCC-CHHHHHHh-cCcCCCHHHHHHHHHHHHHHHHHHHHCC--EECCCCCHHHEEEcCCCCEEEEecccceeccCC
Confidence 9999975 88888753 3346888999999999999999999998 9999999999999999999999999886432
Q ss_pred -------CCCccccchhhccc-CCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhc--CCCCccc------
Q 004979 586 -------AAKTGSAAMELLET-SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKG--EQPLKDI------ 649 (721)
Q Consensus 586 -------~~~~~~~apE~~~~-~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~--~~~~~~~------ 649 (721)
.++..|+|||.+.+ ..++.++|||||||++|||++|..||.... ..+....+... ......+
T Consensus 166 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~ 243 (346)
T 1ua2_A 166 NRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDS--DLDQLTRIFETLGTPTEEQWPDMCSL 243 (346)
T ss_dssp CCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHHHHHCCCCTTTSSSTTSS
T ss_pred cccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCC--HHHHHHHHHHHcCCCChhhhhhhccC
Confidence 23556899999865 458999999999999999999999986432 22222332221 1100000
Q ss_pred ---cC-Cccc-----cccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004979 650 ---VD-PTLK-----SFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 689 (721)
Q Consensus 650 ---~d-~~l~-----~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 689 (721)
+. .... ......+.++.+|+.+||+.||++|||+.|+++.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 244 PDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp TTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred cccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 00 0000 1113345789999999999999999999999874
No 186
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=2.4e-37 Score=340.48 Aligned_cols=251 Identities=16% Similarity=0.202 Sum_probs=179.8
Q ss_pred hhhhhC-cCCCCceeEEEEEEec---CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCc
Q 004979 428 FSNIIG-SFSDGTVGTVYKGTLS---SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPF 503 (721)
Q Consensus 428 ~~~ii~-~lg~G~~g~Vyk~~~~---~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~ 503 (721)
.+++.| +||+|+||+||+|+.. ++..||+|++..... ...+.+|+++|++++|||||++++++......
T Consensus 21 ~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~-------~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 93 (405)
T 3rgf_A 21 LFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI-------SMSACREIALLRELKHPNVISLQKVFLSHADR 93 (405)
T ss_dssp HEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC-------CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTT
T ss_pred hhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC-------CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCC
Confidence 345555 6999999999999965 578899998864321 13688999999999999999999999754444
Q ss_pred eEEEEEecCCCCChhhhhhhcc-------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEe----CCCCc
Q 004979 504 TRMMVFEYSPNGSLFEHLHIQE-------AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYL----TEDYA 572 (721)
Q Consensus 504 ~~~lV~Ey~~~GsL~~~l~~~~-------~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl----~~~~~ 572 (721)
..++||||+. |+|.+++.... ...+++..+..|+.||+.||+|||+.+ |+||||||+|||+ +.++.
T Consensus 94 ~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~--ivH~Dlkp~NIll~~~~~~~~~ 170 (405)
T 3rgf_A 94 KVWLLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW--VLHRDLKPANILVMGEGPERGR 170 (405)
T ss_dssp EEEEEEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECCSSTTTTC
T ss_pred eEEEEEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC--EeCCCcCHHHeEEecCCCCCCc
Confidence 7899999996 58888875321 234899999999999999999999998 9999999999999 77899
Q ss_pred EEEeccCCCCCCC------------CCCccccchhhccc-CCCCCCccHHHHHHHHHHHHhCCCcccCCCCCH-------
Q 004979 573 AKISDFSFWNNTT------------AAKTGSAAMELLET-SAVDLESNVYSFGTILFEMITGRISYSIENGSL------- 632 (721)
Q Consensus 573 ~kL~DFGla~~~~------------~~~~~~~apE~~~~-~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~------- 632 (721)
+||+|||+++... .++..|+|||.+.+ ..++.++|||||||++|||+||+.||.....+.
T Consensus 171 ~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~ 250 (405)
T 3rgf_A 171 VKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYH 250 (405)
T ss_dssp EEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCC
T ss_pred EEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccch
Confidence 9999999986432 23557999999876 458999999999999999999999996443211
Q ss_pred HHHHHHHhhcCCCCccccCCccccc---------------------------cHHHHHHHHHHHHHcccCCCCCCCCHHH
Q 004979 633 ENWASEYLKGEQPLKDIVDPTLKSF---------------------------QENVLEELLVVIKNCVHPDPKQRPSMRG 685 (721)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~d~~l~~~---------------------------~~~~~~~l~~li~~Cl~~dP~~RPs~~e 685 (721)
.+.+..++.............+... ......++.+|+.+||+.||++|||+.|
T Consensus 251 ~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e 330 (405)
T 3rgf_A 251 HDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQ 330 (405)
T ss_dssp HHHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHH
T ss_pred HHHHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHH
Confidence 1111111111000000000000000 0011457889999999999999999999
Q ss_pred HHH
Q 004979 686 IAA 688 (721)
Q Consensus 686 vl~ 688 (721)
+++
T Consensus 331 ~L~ 333 (405)
T 3rgf_A 331 AMQ 333 (405)
T ss_dssp HHT
T ss_pred Hhc
Confidence 987
No 187
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=8.9e-37 Score=322.04 Aligned_cols=244 Identities=20% Similarity=0.234 Sum_probs=194.7
Q ss_pred hhhhCcCCCCceeEEEEEEe-cCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEEE
Q 004979 429 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 507 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~-~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~l 507 (721)
|++.+.+|+|+||.||+|+. .++..+++|++....... .....+.+.+|++++++++||||+++++++...+....++
T Consensus 7 y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (305)
T 2wtk_C 7 YLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRR-IPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYM 85 (305)
T ss_dssp BCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHH-STTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEEE
T ss_pred eeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccc-cchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEEE
Confidence 46778899999999999996 467899999886543211 1234567999999999999999999999986544336799
Q ss_pred EEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCC---
Q 004979 508 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT--- 584 (721)
Q Consensus 508 V~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~--- 584 (721)
||||+++| |.+++.......+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||++...
T Consensus 86 v~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~--i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~ 162 (305)
T 2wtk_C 86 VMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQG--IVHKDIKPGNLLLTTGGTLKISALGVAEALHPF 162 (305)
T ss_dssp EEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECTTCCEEECCCTTCEECCTT
T ss_pred EehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCC--eeecCCCcccEEEcCCCcEEeeccccccccCcc
Confidence 99999877 777776555667999999999999999999999998 999999999999999999999999987532
Q ss_pred --------CCCCccccchhhcccCC--CCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcc
Q 004979 585 --------TAAKTGSAAMELLETSA--VDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTL 654 (721)
Q Consensus 585 --------~~~~~~~~apE~~~~~~--~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 654 (721)
..++..|+|||.+.+.. ++.++|||||||++|||+||+.||.. .+..+.......+...
T Consensus 163 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~--~~~~~~~~~i~~~~~~--------- 231 (305)
T 2wtk_C 163 AADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEG--DNIYKLFENIGKGSYA--------- 231 (305)
T ss_dssp CSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCC--SSHHHHHHHHHHCCCC---------
T ss_pred ccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCC--chHHHHHHHHhcCCCC---------
Confidence 22456789999987644 37899999999999999999999963 3344444444333221
Q ss_pred ccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004979 655 KSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 689 (721)
Q Consensus 655 ~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 689 (721)
.+..++.++.+++.+||+.||++||++.|+++.
T Consensus 232 --~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 232 --IPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp --CCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred --CCCccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 122345678899999999999999999999874
No 188
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=1e-36 Score=323.11 Aligned_cols=247 Identities=19% Similarity=0.291 Sum_probs=192.0
Q ss_pred HHHHHHhhhhhhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEe
Q 004979 420 ELEAACEDFSNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCE 498 (721)
Q Consensus 420 ~l~~~~~~~~~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~ 498 (721)
++.....+.+++++.+|+|+||.||+|+.. ++..|++|++..... .+.+.+|++++.+++||||+++++++.
T Consensus 22 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-------~~~~~~e~~~l~~l~h~~i~~~~~~~~ 94 (314)
T 3com_A 22 SLTKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESD-------LQEIIKEISIMQQCDSPHVVKYYGSYF 94 (314)
T ss_dssp --------CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTSC-------CHHHHHHHHHHHTCCCTTBCCEEEEEE
T ss_pred hhhhcchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchHH-------HHHHHHHHHHHHhCCCCCCccEEEEEE
Confidence 333333444578889999999999999975 588999998864321 246889999999999999999999998
Q ss_pred cCCCceEEEEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEecc
Q 004979 499 EDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF 578 (721)
Q Consensus 499 ~~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DF 578 (721)
..+ ..++||||+++|+|.+++.. ....+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+||
T Consensus 95 ~~~--~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~--i~H~dl~p~Nil~~~~~~~kl~df 169 (314)
T 3com_A 95 KNT--DLWIVMEYCGAGSVSDIIRL-RNKTLTEDEIATILQSTLKGLEYLHFMR--KIHRDIKAGNILLNTEGHAKLADF 169 (314)
T ss_dssp ETT--EEEEEEECCTTEEHHHHHHH-HTCCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTCCEEECCC
T ss_pred eCC--EEEEEeecCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC--CcCCCcCHHHEEECCCCCEEEeec
Confidence 876 67999999999999999863 3457999999999999999999999998 999999999999999999999999
Q ss_pred CCCCCC---------CCCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCccc
Q 004979 579 SFWNNT---------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDI 649 (721)
Q Consensus 579 Gla~~~---------~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 649 (721)
|++... ..++..|+|||.+....++.++|||||||++|||+||+.||.... .............+ ..
T Consensus 170 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--~~~~~~~~~~~~~~--~~ 245 (314)
T 3com_A 170 GVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIH--PMRAIFMIPTNPPP--TF 245 (314)
T ss_dssp TTCEECBTTBSCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSC--HHHHHHHHHHSCCC--CC
T ss_pred ccchhhhhhccccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCC--hHHHHHHHhcCCCc--cc
Confidence 987432 224557899999999899999999999999999999999996332 22222222222111 00
Q ss_pred cCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004979 650 VDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 688 (721)
Q Consensus 650 ~d~~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 688 (721)
..+...+.++.+++.+||+.||++||++.|+++
T Consensus 246 ------~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 246 ------RKPELWSDNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp ------SSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred ------CCcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 112334577899999999999999999999986
No 189
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=4.7e-37 Score=333.29 Aligned_cols=241 Identities=13% Similarity=0.218 Sum_probs=194.2
Q ss_pred hhhhCcCCCCceeEEEEEE------ecCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCC---CCccceEeEEEec
Q 004979 429 SNIIGSFSDGTVGTVYKGT------LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN---HKNFVNLIGYCEE 499 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~------~~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~---H~nIv~l~g~~~~ 499 (721)
+.+.+.+|+|+||+||+|+ ..+++.||||++.... ..++.+|++++.+++ |+||+++++++..
T Consensus 67 y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--------~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~ 138 (365)
T 3e7e_A 67 VYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN--------PWEFYIGTQLMERLKPSMQHMFMKFYSAHLF 138 (365)
T ss_dssp EEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC--------HHHHHHHHHHHHHSCGGGGGGBCCEEEEEEC
T ss_pred EEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC--------hhHHHHHHHHHHHhhhhhhhhhhhhheeeec
Confidence 3677889999999999994 4568899999886432 245778888888886 9999999999988
Q ss_pred CCCceEEEEEecCCCCChhhhhhhc---cCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCC-------
Q 004979 500 DEPFTRMMVFEYSPNGSLFEHLHIQ---EAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTE------- 569 (721)
Q Consensus 500 ~~~~~~~lV~Ey~~~GsL~~~l~~~---~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~------- 569 (721)
.+ ..++||||+++|+|.+++... ....+++..+..|+.||+.||+|||+++ ||||||||+|||++.
T Consensus 139 ~~--~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~--ivHrDiKp~NIll~~~~~~~~~ 214 (365)
T 3e7e_A 139 QN--GSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCE--IIHGDIKPDNFILGNGFLEQDD 214 (365)
T ss_dssp SS--CEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTT--EECCCCSGGGEEECGGGTCC--
T ss_pred CC--CcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCC--eecCCCCHHHEEecccccCccc
Confidence 77 679999999999999999643 2456999999999999999999999988 999999999999998
Q ss_pred ----CCcEEEeccCCCCCC-----------CCCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHH
Q 004979 570 ----DYAAKISDFSFWNNT-----------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLEN 634 (721)
Q Consensus 570 ----~~~~kL~DFGla~~~-----------~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~ 634 (721)
++.+||+|||+++.. ..++..|+|||.+.+..++.++|||||||++|||+||+.||.......
T Consensus 215 ~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~-- 292 (365)
T 3e7e_A 215 EDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGE-- 292 (365)
T ss_dssp ----CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTE--
T ss_pred cccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCc--
Confidence 899999999998421 235678999999999999999999999999999999999985322110
Q ss_pred HHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCC-CCHHHHHHHHHHhhhcCC
Q 004979 635 WASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQR-PSMRGIAAKLKEITAMEP 698 (721)
Q Consensus 635 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~Cl~~dP~~R-Ps~~evl~~L~~i~~~~~ 698 (721)
. ......... ...+.+.+++..|++.+|.+| |++.++.+.|+++.....
T Consensus 293 ---------~----~~~~~~~~~--~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~~~ 342 (365)
T 3e7e_A 293 ---------C----KPEGLFRRL--PHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQHY 342 (365)
T ss_dssp ---------E----EECSCCTTC--SSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHHHT
T ss_pred ---------e----eechhcccc--CcHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHHhh
Confidence 0 011111111 124567789999999999998 689999999998776543
No 190
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=4.3e-37 Score=324.42 Aligned_cols=239 Identities=19% Similarity=0.292 Sum_probs=196.6
Q ss_pred hhhhhCcCCCCceeEEEEEEe-cCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEE
Q 004979 428 FSNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRM 506 (721)
Q Consensus 428 ~~~ii~~lg~G~~g~Vyk~~~-~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~ 506 (721)
.+++++.+|+|+||.||+|+. .++..|++|++...... ...+.+.+|+.++++++||||+++++++.+.+ ..+
T Consensus 23 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~ 96 (303)
T 3a7i_A 23 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAE----DEIEDIQQEITVLSQCDSPYVTKYYGSYLKDT--KLW 96 (303)
T ss_dssp TEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCS----TTHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEE
T ss_pred HHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccH----HHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC--eEE
Confidence 346788899999999999985 46889999988654322 23467999999999999999999999998876 679
Q ss_pred EEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCC--
Q 004979 507 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT-- 584 (721)
Q Consensus 507 lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~-- 584 (721)
+||||+++|+|.+++. ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++...
T Consensus 97 lv~e~~~~~~L~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~ 171 (303)
T 3a7i_A 97 IIMEYLGGGSALDLLE---PGPLDETQIATILREILKGLDYLHSEK--KIHRDIKAANVLLSEHGEVKLADFGVAGQLTD 171 (303)
T ss_dssp EEEECCTTEEHHHHHT---TSCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTSCEEECCCTTCEECBT
T ss_pred EEEEeCCCCcHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC--CccCCCChheEEECCCCCEEEeecccceecCc
Confidence 9999999999999985 346899999999999999999999998 999999999999999999999999987432
Q ss_pred -------CCCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccc
Q 004979 585 -------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSF 657 (721)
Q Consensus 585 -------~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 657 (721)
..++..|+|||.+....++.++|||||||++|||+||+.||... ...+..........+ ..
T Consensus 172 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~--~~~~~~~~~~~~~~~----------~~ 239 (303)
T 3a7i_A 172 TQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL--HPMKVLFLIPKNNPP----------TL 239 (303)
T ss_dssp TBCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTS--CHHHHHHHHHHSCCC----------CC
T ss_pred cccccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCc--CHHHHHHHhhcCCCC----------CC
Confidence 22455789999999999999999999999999999999999633 222322222222111 11
Q ss_pred cHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004979 658 QENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 689 (721)
Q Consensus 658 ~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 689 (721)
...++.++.+++.+||+.||++||++.|+++.
T Consensus 240 ~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 271 (303)
T 3a7i_A 240 EGNYSKPLKEFVEACLNKEPSFRPTAKELLKH 271 (303)
T ss_dssp CSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTC
T ss_pred ccccCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 22345678999999999999999999999875
No 191
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=4.3e-37 Score=323.56 Aligned_cols=249 Identities=18% Similarity=0.286 Sum_probs=192.0
Q ss_pred hhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEEEE
Q 004979 430 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 508 (721)
Q Consensus 430 ~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~lV 508 (721)
++++.+|+|+||+||+|+.. +++.|+||++...... ....+.+.+|++++++++||||+++++++...+ ..++|
T Consensus 6 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv 80 (299)
T 2r3i_A 6 QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTET---EGVPSTAIREISLLKELNHPNIVKLLDVIHTEN--KLYLV 80 (299)
T ss_dssp EEEEEEEECSSSEEEEEEETTTCCEEEEEEC-----------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETT--EEEEE
T ss_pred hhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccc---hhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCC--ceEEE
Confidence 56788999999999999975 6889999988643321 112356889999999999999999999998877 67999
Q ss_pred EecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCC----
Q 004979 509 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT---- 584 (721)
Q Consensus 509 ~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~---- 584 (721)
|||+. |+|.+++.......+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++...
T Consensus 81 ~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~ 157 (299)
T 2r3i_A 81 FEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 157 (299)
T ss_dssp EECCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCS
T ss_pred EEccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHCC--ccCCCCCHHHeEEcCCCCEEECcchhhhhccCCc
Confidence 99997 69999987655567999999999999999999999998 999999999999999999999999976421
Q ss_pred -----CCCCccccchhhcccCC-CCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCccc---------
Q 004979 585 -----TAAKTGSAAMELLETSA-VDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDI--------- 649 (721)
Q Consensus 585 -----~~~~~~~~apE~~~~~~-~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~--------- 649 (721)
..++..|+|||.+.+.. ++.++|||||||++|||+||+.||.... ..+...............
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (299)
T 2r3i_A 158 RTYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDS--EIDQLFRIFRTLGTPDEVVWPGVTSMP 235 (299)
T ss_dssp BCTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHHHHHCCCCTTTSTTGGGST
T ss_pred cccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCcc--HHHHHHHHHHHhCCCchhhhhHhhcCc
Confidence 22456789999987655 7999999999999999999999996433 222222222211110000
Q ss_pred ---------cCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004979 650 ---------VDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 688 (721)
Q Consensus 650 ---------~d~~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 688 (721)
............+.++.+++.+||+.||++|||+.|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 236 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp TCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 000111111234578899999999999999999999986
No 192
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=5.2e-37 Score=327.74 Aligned_cols=244 Identities=16% Similarity=0.210 Sum_probs=189.6
Q ss_pred hhhhCcCCCCceeEEEEEEe-cCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCC-CCccceEeEEEecCCCceEE
Q 004979 429 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN-HKNFVNLIGYCEEDEPFTRM 506 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~-~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~-H~nIv~l~g~~~~~~~~~~~ 506 (721)
+++++.+|+|+||+||+|+. .+++.||||++.... .+.+.+|++++++++ ||||+++++++.+......+
T Consensus 38 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--------~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~ 109 (330)
T 3nsz_A 38 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK--------KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPA 109 (330)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCC--------HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEE
T ss_pred eEEEEEecccCCeEEEEEEECCCCcEEEEEEecccc--------hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceE
Confidence 46788999999999999985 578899999876321 256889999999997 99999999999875444679
Q ss_pred EEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCC-cEEEeccCCCCCC-
Q 004979 507 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDY-AAKISDFSFWNNT- 584 (721)
Q Consensus 507 lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~-~~kL~DFGla~~~- 584 (721)
+||||+++++|.+++. .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++ .+||+|||+++..
T Consensus 110 lv~e~~~~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~ 182 (330)
T 3nsz_A 110 LVFEHVNNTDFKQLYQ-----TLTDYDIRFYMYEILKALDYCHSMG--IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH 182 (330)
T ss_dssp EEEECCCCCCHHHHGG-----GCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred EEEeccCchhHHHHHH-----hCCHHHHHHHHHHHHHHHHHHHhCC--eeeCCCCHHHEEEcCCCCEEEEEeCCCceEcC
Confidence 9999999999999874 3889999999999999999999998 99999999999999776 8999999998532
Q ss_pred -------CCCCccccchhhccc-CCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhh-------------cC
Q 004979 585 -------TAAKTGSAAMELLET-SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLK-------------GE 643 (721)
Q Consensus 585 -------~~~~~~~~apE~~~~-~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~-------------~~ 643 (721)
..++..|+|||.+.. ..++.++|||||||++|||+||+.||........... .... ..
T Consensus 183 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~ 261 (330)
T 3nsz_A 183 PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV-RIAKVLGTEDLYDYIDKYN 261 (330)
T ss_dssp TTCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHH-HHHHHHCHHHHHHHHHHTT
T ss_pred CCCccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHH-HHHHhcCCchhhhHHHHhc
Confidence 224557899999876 6789999999999999999999999964332221111 1100 00
Q ss_pred CCCc----cccC----Cc-----cccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004979 644 QPLK----DIVD----PT-----LKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 688 (721)
Q Consensus 644 ~~~~----~~~d----~~-----l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 688 (721)
.... +... .. ........+.++.+|+.+||+.||++|||++|+++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~ 319 (330)
T 3nsz_A 262 IELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 319 (330)
T ss_dssp CCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred cccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 0000 0000 00 00112235678999999999999999999999986
No 193
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=4.1e-37 Score=332.97 Aligned_cols=250 Identities=19% Similarity=0.290 Sum_probs=194.1
Q ss_pred hhhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEEE
Q 004979 429 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 507 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~l 507 (721)
+++++.+|+|+||+||+|+.. ++..||+|++.... .....+.+.+|++++++++||||+++++++.+.+ ..++
T Consensus 35 y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~l 108 (360)
T 3eqc_A 35 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI----KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG--EISI 108 (360)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCC----CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETT--EEEE
T ss_pred ceeeeeecCCCCeEEEEEEECCCCcEEEEEEecccc----CHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECC--EEEE
Confidence 367788999999999999965 68889999886542 2334578999999999999999999999998877 6799
Q ss_pred EEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcC-CCCeEeeCCCCCCeEeCCCCcEEEeccCCCC----
Q 004979 508 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQL-TPPIAHRNLQSSSIYLTEDYAAKISDFSFWN---- 582 (721)
Q Consensus 508 V~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~-~~~IvHrDLKp~NILl~~~~~~kL~DFGla~---- 582 (721)
||||+++|+|.+++... ..+++..+..|+.|++.||+|||+. + |+||||||+|||++.++.+||+|||+++
T Consensus 109 v~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~~i~~~l~~lh~~~~--i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 184 (360)
T 3eqc_A 109 CMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 184 (360)
T ss_dssp EECCCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHHHC--CCCSCCSGGGEEECTTCCEEECCCCCCHHHHH
T ss_pred EEECCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHhCC--EEcCCccHHHEEECCCCCEEEEECCCCccccc
Confidence 99999999999998643 4589999999999999999999985 7 9999999999999999999999999874
Q ss_pred ---CCCCCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHH-hhcCC------------CC
Q 004979 583 ---NTTAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEY-LKGEQ------------PL 646 (721)
Q Consensus 583 ---~~~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~-~~~~~------------~~ 646 (721)
....++..|+|||.+.+..++.++|||||||++|||+||+.||.............. ..+.. ..
T Consensus 185 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (360)
T 3eqc_A 185 SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPL 264 (360)
T ss_dssp HC----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC---------------------
T ss_pred ccccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcc
Confidence 223456789999999999999999999999999999999999964332111110000 00000 00
Q ss_pred c-------------cc----cCCcccc-ccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004979 647 K-------------DI----VDPTLKS-FQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 688 (721)
Q Consensus 647 ~-------------~~----~d~~l~~-~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 688 (721)
. +. ....... ....++.++.+|+.+||+.||++|||+.|+++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 324 (360)
T 3eqc_A 265 NKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV 324 (360)
T ss_dssp ---------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred cccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 0 00 0000000 01124567899999999999999999999986
No 194
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=7.7e-38 Score=333.86 Aligned_cols=248 Identities=17% Similarity=0.231 Sum_probs=189.6
Q ss_pred hhhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEEE
Q 004979 429 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 507 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~l 507 (721)
|.+++.+|+|+||+||+|+.. ++..||+|++...... .....+.+|++++++++||||+++++++...+ ..++
T Consensus 4 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~l 77 (324)
T 3mtl_A 4 YIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEE----GAPCTAIREVSLLKDLKHANIVTLHDIIHTEK--SLTL 77 (324)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC----------CCCCCCCHHHHSCCCCTTBCCEEEEEECSS--CEEE
T ss_pred eEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEeccccc----ccchhHHHHHHHHHhcCCCCCCeeeeEEeeCC--EEEE
Confidence 356788999999999999975 7889999988643221 11124568999999999999999999998876 6799
Q ss_pred EEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCCC--
Q 004979 508 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT-- 585 (721)
Q Consensus 508 V~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~~-- 585 (721)
||||++ |+|.+++.. ....+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 78 v~e~~~-~~l~~~~~~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~--ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~ 153 (324)
T 3mtl_A 78 VFEYLD-KDLKQYLDD-CGNIINMHNVKLFLFQLLRGLAYCHRQK--VLHRDLKPQNLLINERGELKLADFGLARAKSIP 153 (324)
T ss_dssp EEECCS-EEHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT--EEESSCCGGGEEECTTCCEEECSSSEEECC---
T ss_pred Eecccc-cCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC--ccCCCcCHHHEEECCCCCEEEccCcccccccCC
Confidence 999997 699988864 3456899999999999999999999998 9999999999999999999999999875332
Q ss_pred -------CCCccccchhhccc-CCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcC-CCCccccCC----
Q 004979 586 -------AAKTGSAAMELLET-SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGE-QPLKDIVDP---- 652 (721)
Q Consensus 586 -------~~~~~~~apE~~~~-~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~-~~~~~~~d~---- 652 (721)
.++..|+|||.+.+ ..++.++|||||||++|||+||+.||.... ..+....+.... .+.......
T Consensus 154 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~ 231 (324)
T 3mtl_A 154 TKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGST--VEEQLHFIFRILGTPTEETWPGILSN 231 (324)
T ss_dssp ---------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHHHHHCCCCTTTSTTGGGC
T ss_pred ccccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHHHhCCCChHhchhhhcc
Confidence 23567899999865 678999999999999999999999996433 222222222110 111110000
Q ss_pred --------------ccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004979 653 --------------TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 688 (721)
Q Consensus 653 --------------~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 688 (721)
......+....++.+|+.+||+.||++|||+.|+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 281 (324)
T 3mtl_A 232 EEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK 281 (324)
T ss_dssp HHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 000112234567899999999999999999999987
No 195
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=5.4e-37 Score=318.90 Aligned_cols=240 Identities=20% Similarity=0.334 Sum_probs=192.9
Q ss_pred hhhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEEE
Q 004979 429 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 507 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~l 507 (721)
+.+.+.+|+|+||.||+|+.. +++.|++|++...... .....+.+.+|++++++++||||+++++++...+ ..++
T Consensus 13 y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~l 88 (276)
T 2h6d_A 13 YVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIR--SLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPT--DFFM 88 (276)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHH--HTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEE
T ss_pred EEEEeeecCCCCeEEEEEEECCCCceEEEEEecccccc--chhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCC--eEEE
Confidence 366788999999999999975 7889999988643211 1223457899999999999999999999998876 6799
Q ss_pred EEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCCCC-
Q 004979 508 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA- 586 (721)
Q Consensus 508 V~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~~~- 586 (721)
||||+++++|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.....
T Consensus 89 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~ 164 (276)
T 2h6d_A 89 VMEYVSGGELFDYICKH--GRVEEMEARRLFQQILSAVDYCHRHM--VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG 164 (276)
T ss_dssp EEECCCSCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHHC--SSCCCCCGGGEEECTTSCEEECCCCGGGCCCC-
T ss_pred EEeccCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCC--CccCCCChhhEEECCCCCEEEeecccccccCCC
Confidence 99999999999998643 45899999999999999999999988 99999999999999999999999998764322
Q ss_pred -------CCccccchhhcccCCC-CCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004979 587 -------AKTGSAAMELLETSAV-DLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 658 (721)
Q Consensus 587 -------~~~~~~apE~~~~~~~-s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 658 (721)
++..|+|||.+.+..+ +.++||||||+++|||++|+.||... ...........+... .+
T Consensus 165 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~--~~~~~~~~~~~~~~~-----------~~ 231 (276)
T 2h6d_A 165 EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDE--HVPTLFKKIRGGVFY-----------IP 231 (276)
T ss_dssp ------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHCCCC-----------CC
T ss_pred cceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCC--cHHHHHHHhhcCccc-----------Cc
Confidence 3457899999987765 68999999999999999999999643 333333333332211 11
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004979 659 ENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 689 (721)
Q Consensus 659 ~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 689 (721)
.....++.+++.+||+.||++||++.|+++.
T Consensus 232 ~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 232 EYLNRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred hhcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 2334678899999999999999999999873
No 196
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=5.7e-38 Score=341.33 Aligned_cols=247 Identities=9% Similarity=0.059 Sum_probs=175.4
Q ss_pred hhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccchhhHHHHHHHHHH---HHHhcCCCCccceEe-------EEEe
Q 004979 430 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKI---DTLSKVNHKNFVNLI-------GYCE 498 (721)
Q Consensus 430 ~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei---~~l~~l~H~nIv~l~-------g~~~ 498 (721)
++++.+|+|+||+||+|+.. +++.||||++...... .....+.+.+|+ +.|+. +||||++++ +++.
T Consensus 65 ~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~~~ 141 (371)
T 3q60_A 65 KLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAEN--SRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDAVA 141 (371)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTT--HHHHHHHHHHHHHHHHHHHC-----------CBCCCCEEEE
T ss_pred eeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccc--cccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehhee
Confidence 56788999999999999965 7889999998765432 233456778885 45555 799988755 4444
Q ss_pred cCCC---------------ceEEEEEecCCCCChhhhhhhccCCCCCHHHH------HHHHHHHHHHHHHHhcCCCCeEe
Q 004979 499 EDEP---------------FTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMR------LRIAMGMAYCLEHMHQLTPPIAH 557 (721)
Q Consensus 499 ~~~~---------------~~~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~------~~ia~~ia~gL~yLH~~~~~IvH 557 (721)
..+. ...++||||++ |+|.+++.... ..+.+..+ ..++.||+.||+|||+++ |+|
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~-~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~--ivH 217 (371)
T 3q60_A 142 VQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLD-FVYVFRGDEGILALHILTAQLIRLAANLQSKG--LVH 217 (371)
T ss_dssp ETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHH-HSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTT--EEE
T ss_pred cCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhc-cccchhhhhhhhhHHHHHHHHHHHHHHHHHCC--Ccc
Confidence 3221 24799999998 89999997532 23455555 788899999999999998 999
Q ss_pred eCCCCCCeEeCCCCcEEEeccCCCCCCC------CCCccccchhhccc--CCCCCCccHHHHHHHHHHHHhCCCcccCCC
Q 004979 558 RNLQSSSIYLTEDYAAKISDFSFWNNTT------AAKTGSAAMELLET--SAVDLESNVYSFGTILFEMITGRISYSIEN 629 (721)
Q Consensus 558 rDLKp~NILl~~~~~~kL~DFGla~~~~------~~~~~~~apE~~~~--~~~s~ksDVwSfGvvL~ElltG~~P~~~~~ 629 (721)
|||||+|||++.++.+||+|||+++... .++..|+|||.+.+ ..++.++|||||||++|||+||+.||....
T Consensus 218 rDikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~ 297 (371)
T 3q60_A 218 GHFTPDNLFIMPDGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVT 297 (371)
T ss_dssp TTCSGGGEEECTTSCEEECCGGGEEETTCEEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCC
T ss_pred CcCCHHHEEECCCCCEEEEecceeeecCCCccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcC
Confidence 9999999999999999999999986432 23467999999977 789999999999999999999999997543
Q ss_pred CCHHHHHHHHhhcCCCCccccCCcc-ccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004979 630 GSLENWASEYLKGEQPLKDIVDPTL-KSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 688 (721)
Q Consensus 630 ~~~~~~~~~~~~~~~~~~~~~d~~l-~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 688 (721)
...... ... ........... ......++.++.+|+.+||+.||++||++.|+++
T Consensus 298 ~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 298 PGIKGS----WKR-PSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp TTCTTC----CCB-CCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred cccccc----hhh-hhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 211000 000 00000000000 0111345678999999999999999999999975
No 197
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=2.4e-36 Score=327.85 Aligned_cols=245 Identities=20% Similarity=0.305 Sum_probs=195.7
Q ss_pred hhhhCcCCCCceeEEEEEEec-CCcEEEEEEeeecccc---chhhHHHHHHHHHHHHHhcC-CCCccceEeEEEecCCCc
Q 004979 429 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRA---DWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPF 503 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~---~~~~~~~~~f~~Ei~~l~~l-~H~nIv~l~g~~~~~~~~ 503 (721)
+++...+|.|+||.||+|+.. +|..||||++...... .......+.+.+|+.++.++ +||||+++++++...+
T Consensus 96 y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~-- 173 (365)
T 2y7j_A 96 YDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSS-- 173 (365)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSS--
T ss_pred cccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCC--
Confidence 367788999999999999975 7899999988654321 11123356789999999999 8999999999998876
Q ss_pred eEEEEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCC
Q 004979 504 TRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN 583 (721)
Q Consensus 504 ~~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~ 583 (721)
..++||||+++|+|.+++.. ...+++..+..++.||+.||+|||+.+ |+||||||+|||+++++.+||+|||++..
T Consensus 174 ~~~lv~e~~~g~~L~~~l~~--~~~l~~~~~~~i~~qi~~~L~~LH~~g--i~H~Dlkp~NIl~~~~~~ikl~DfG~~~~ 249 (365)
T 2y7j_A 174 FMFLVFDLMRKGELFDYLTE--KVALSEKETRSIMRSLLEAVSFLHANN--IVHRDLKPENILLDDNMQIRLSDFGFSCH 249 (365)
T ss_dssp EEEEEECCCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEEEEEeCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEECCCCCEEEEecCcccc
Confidence 67999999999999999864 346899999999999999999999998 99999999999999999999999998753
Q ss_pred C--------CCCCccccchhhccc------CCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCccc
Q 004979 584 T--------TAAKTGSAAMELLET------SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDI 649 (721)
Q Consensus 584 ~--------~~~~~~~~apE~~~~------~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 649 (721)
. ..++..|+|||.+.+ ..++.++|||||||++|||+||+.||... ........+..+......
T Consensus 250 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~--~~~~~~~~i~~~~~~~~~- 326 (365)
T 2y7j_A 250 LEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHR--RQILMLRMIMEGQYQFSS- 326 (365)
T ss_dssp CCTTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHTCCCCCH-
T ss_pred cCCCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCC--CHHHHHHHHHhCCCCCCC-
Confidence 2 234567999998853 36889999999999999999999999643 233333333333211110
Q ss_pred cCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004979 650 VDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 688 (721)
Q Consensus 650 ~d~~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 688 (721)
+ .....+.++.+++.+||+.||++||++.|+++
T Consensus 327 --~----~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 327 --P----EWDDRSSTVKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp --H----HHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred --c----ccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 0 01123467889999999999999999999986
No 198
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=5e-37 Score=323.48 Aligned_cols=241 Identities=20% Similarity=0.286 Sum_probs=193.0
Q ss_pred hhhhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEE
Q 004979 428 FSNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRM 506 (721)
Q Consensus 428 ~~~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~ 506 (721)
.+++++.+|+|+||+||+|+.. ++..+++|++...... ..+.+.+|++++++++||||+++++++...+ ..+
T Consensus 20 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~ 92 (302)
T 2j7t_A 20 VWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEE-----ELEDYIVEIEILATCDHPYIVKLLGAYYHDG--KLW 92 (302)
T ss_dssp TEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----C-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECC---CEE
T ss_pred ceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHH-----HHHHHHHHHHHHhcCCCCCEeeeeeeeeeCC--eEE
Confidence 3478889999999999999975 5788999987644321 2467899999999999999999999998876 679
Q ss_pred EEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCC----
Q 004979 507 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWN---- 582 (721)
Q Consensus 507 lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~---- 582 (721)
+||||+++|+|.+++.. ....+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++.
T Consensus 93 lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 169 (302)
T 2j7t_A 93 IMIEFCPGGAVDAIMLE-LDRGLTEPQIQVVCRQMLEALNFLHSKR--IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLK 169 (302)
T ss_dssp EEEECCTTEEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCSGGGEEECTTSCEEECCCHHHHHHHH
T ss_pred EEEEeCCCCcHHHHHHh-hccCCCHHHHHHHHHHHHHHHHHHhcCC--cccCCCCHHHEEECCCCCEEEEECCCCccccc
Confidence 99999999999998864 2456999999999999999999999998 9999999999999999999999999753
Q ss_pred -----CCCCCCccccchhhc-----ccCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCccccCC
Q 004979 583 -----NTTAAKTGSAAMELL-----ETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDP 652 (721)
Q Consensus 583 -----~~~~~~~~~~apE~~-----~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 652 (721)
....++..|+|||.+ ....++.++|||||||++|||+||+.||... +.............+. .
T Consensus 170 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~--~~~~~~~~~~~~~~~~--~--- 242 (302)
T 2j7t_A 170 TLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHEL--NPMRVLLKIAKSDPPT--L--- 242 (302)
T ss_dssp HHHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTS--CHHHHHHHHHHSCCCC--C---
T ss_pred cccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccC--CHHHHHHHHhccCCcc--c---
Confidence 223456789999987 4677899999999999999999999999633 3333333333332211 0
Q ss_pred ccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004979 653 TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 688 (721)
Q Consensus 653 ~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 688 (721)
..+..++.++.+++.+||+.||++|||+.|+++
T Consensus 243 ---~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 243 ---LTPSKWSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp ---SSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred ---CCccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 112344567899999999999999999999875
No 199
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=1.4e-36 Score=343.12 Aligned_cols=243 Identities=21% Similarity=0.285 Sum_probs=192.7
Q ss_pred hhhhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEE
Q 004979 428 FSNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRM 506 (721)
Q Consensus 428 ~~~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~ 506 (721)
.|++++.||+|+||+||+|+.. ++..+|+|++....... .....+.+|++++++++|||||++++++.+.+ ..+
T Consensus 38 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~---~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--~~~ 112 (494)
T 3lij_A 38 MYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVST---SSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKR--NYY 112 (494)
T ss_dssp HEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC--------CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEE
T ss_pred CeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCc---hHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC--EEE
Confidence 3578889999999999999965 67889999987543221 12357899999999999999999999998876 679
Q ss_pred EEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCC---CCcEEEeccCCCCC
Q 004979 507 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTE---DYAAKISDFSFWNN 583 (721)
Q Consensus 507 lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~---~~~~kL~DFGla~~ 583 (721)
+||||+++|+|.+++... ..+++..+..|+.||+.||+|||+++ |+||||||+|||++. ++.+||+|||+++.
T Consensus 113 lv~e~~~~g~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~--ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~ 188 (494)
T 3lij_A 113 LVMECYKGGELFDEIIHR--MKFNEVDAAVIIKQVLSGVTYLHKHN--IVHRDLKPENLLLESKEKDALIKIVDFGLSAV 188 (494)
T ss_dssp EEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEESCSSTTCCEEECCCTTCEE
T ss_pred EEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCChhhEEEeCCCCCCcEEEEECCCCeE
Confidence 999999999999988643 46899999999999999999999998 999999999999976 45599999998753
Q ss_pred C--------CCCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccc
Q 004979 584 T--------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLK 655 (721)
Q Consensus 584 ~--------~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 655 (721)
. ..++..|+|||.+. ..++.++||||+||++|||++|+.||... ...+....+..+..... .+
T Consensus 189 ~~~~~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~--~~~~~~~~i~~~~~~~~---~~--- 259 (494)
T 3lij_A 189 FENQKKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQ--TDQEILRKVEKGKYTFD---SP--- 259 (494)
T ss_dssp CBTTBCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHTCCCCC---SG---
T ss_pred CCCCccccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCC--CHHHHHHHHHhCCCCCC---ch---
Confidence 2 23566899999886 56999999999999999999999999643 34445555444432211 11
Q ss_pred cccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004979 656 SFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 689 (721)
Q Consensus 656 ~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 689 (721)
.....+.++.+++.+||+.||++|||+.|+++.
T Consensus 260 -~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 292 (494)
T 3lij_A 260 -EWKNVSEGAKDLIKQMLQFDSQRRISAQQALEH 292 (494)
T ss_dssp -GGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred -hcccCCHHHHHHHHHHCCCChhhCccHHHHhcC
Confidence 112345678999999999999999999999863
No 200
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=8.1e-37 Score=320.64 Aligned_cols=237 Identities=21% Similarity=0.294 Sum_probs=188.8
Q ss_pred CcCCCCceeEEEEEEe-cCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEEEEEec
Q 004979 433 GSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEY 511 (721)
Q Consensus 433 ~~lg~G~~g~Vyk~~~-~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~lV~Ey 511 (721)
..+|+|+||.||+|+. .++..|++|.+..... ...+.+.+|+.++++++||||+++++++...+ ..++||||
T Consensus 28 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~ 100 (295)
T 2clq_A 28 VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDS-----RYSQPLHEEIALHKHLKHKNIVQYLGSFSENG--FIKIFMEQ 100 (295)
T ss_dssp CEEEECSSSEEEEEEETTTCCEEEEEEEECCCC--------HHHHHHHHHHHTCCCTTBCCEEEEEEETT--EEEEEEEC
T ss_pred EEEeecCcEEEEEEEECCCCeEEEEEEccCCch-----HHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCC--cEEEEEEe
Confidence 4678999999999995 4678899998865421 23467899999999999999999999998877 67999999
Q ss_pred CCCCChhhhhhhcc-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCC-CCcEEEeccCCCCCC-----
Q 004979 512 SPNGSLFEHLHIQE-AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTE-DYAAKISDFSFWNNT----- 584 (721)
Q Consensus 512 ~~~GsL~~~l~~~~-~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~-~~~~kL~DFGla~~~----- 584 (721)
+++|+|.+++.... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++. ++.+||+|||+++..
T Consensus 101 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~ 178 (295)
T 2clq_A 101 VPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ--IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP 178 (295)
T ss_dssp CSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEEETTTCCEEECCTTTCEESCC---
T ss_pred CCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCC--EEccCCChhhEEEECCCCCEEEeecccccccCCCCC
Confidence 99999999987542 335678899999999999999999988 999999999999987 899999999987532
Q ss_pred ----CCCCccccchhhcccC--CCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004979 585 ----TAAKTGSAAMELLETS--AVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 658 (721)
Q Consensus 585 ----~~~~~~~~apE~~~~~--~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 658 (721)
..++..|+|||.+... .++.++|||||||++|||+||+.||................... + ..+
T Consensus 179 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~-------~---~~~ 248 (295)
T 2clq_A 179 CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVH-------P---EIP 248 (295)
T ss_dssp --CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHCCC-------C---CCC
T ss_pred cccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhcccccc-------c---ccc
Confidence 2345678999998654 38899999999999999999999996433222222211111110 1 122
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004979 659 ENVLEELLVVIKNCVHPDPKQRPSMRGIAA 688 (721)
Q Consensus 659 ~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 688 (721)
...+.++.+++.+||+.||++||++.|+++
T Consensus 249 ~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 249 ESMSAEAKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp TTSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred ccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 344577899999999999999999999975
No 201
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=4.8e-37 Score=328.57 Aligned_cols=249 Identities=20% Similarity=0.317 Sum_probs=193.9
Q ss_pred hhhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEEE
Q 004979 429 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 507 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~l 507 (721)
+++++.+|+|+||.||+|+.. ++..||||++..... .....+.+.+|++++++++||||+++++++.+.+ ..++
T Consensus 27 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~l 101 (331)
T 4aaa_A 27 YENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDD---DKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKK--RWYL 101 (331)
T ss_dssp EEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSS---CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEE
T ss_pred heeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCC---chHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCC--EEEE
Confidence 367889999999999999965 588999998864432 2334567889999999999999999999998877 6799
Q ss_pred EEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCC---
Q 004979 508 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT--- 584 (721)
Q Consensus 508 V~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~--- 584 (721)
||||+++++|.+++. ....+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 102 v~e~~~~~~l~~~~~--~~~~~~~~~~~~~~~qi~~~l~~LH~~~--ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 177 (331)
T 4aaa_A 102 VFEFVDHTILDDLEL--FPNGLDYQVVQKYLFQIINGIGFCHSHN--IIHRDIKPENILVSQSGVVKLCDFGFARTLAAP 177 (331)
T ss_dssp EEECCSEEHHHHHHH--STTCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTSCEEECCCTTC------
T ss_pred EEecCCcchHHHHHh--hccCCCHHHHHHHHHHHHHHHHHHHHCC--EEccCcChheEEEcCCCcEEEEeCCCceeecCC
Confidence 999999999988764 3456999999999999999999999998 999999999999999999999999988532
Q ss_pred ------CCCCccccchhhcccC-CCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhh--------------cC
Q 004979 585 ------TAAKTGSAAMELLETS-AVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLK--------------GE 643 (721)
Q Consensus 585 ------~~~~~~~~apE~~~~~-~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~--------------~~ 643 (721)
..++..|+|||.+.+. .++.++|||||||++|||+||+.||..... .+....... ..
T Consensus 178 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (331)
T 4aaa_A 178 GEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSD--IDQLYHIMMCLGNLIPRHQELFNKN 255 (331)
T ss_dssp ------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHHHHHHCSCCHHHHHHHHHC
T ss_pred ccccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCc--HHHHHHHHHHhCCCChhhhhHhhhc
Confidence 2245678999998765 789999999999999999999999964432 111111110 00
Q ss_pred CCCccccCCcc------ccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004979 644 QPLKDIVDPTL------KSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 688 (721)
Q Consensus 644 ~~~~~~~d~~l------~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 688 (721)
........+.. ....+.+++++.+|+.+||+.||++|||+.|+++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 306 (331)
T 4aaa_A 256 PVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306 (331)
T ss_dssp GGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred cccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 00000111111 1112245678999999999999999999999886
No 202
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=5.4e-39 Score=338.40 Aligned_cols=249 Identities=21% Similarity=0.344 Sum_probs=180.3
Q ss_pred hhhhCcCCCCceeEEEEEEecCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhc--CCCCccceEeEEEecCCC--ce
Q 004979 429 SNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSK--VNHKNFVNLIGYCEEDEP--FT 504 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~--l~H~nIv~l~g~~~~~~~--~~ 504 (721)
+.+.+.+|+|+||+||+|+.. +..||||++.... ...+.+|.+++.. ++||||+++++++..... ..
T Consensus 5 y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--------~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 75 (303)
T 3gxj_A 5 IVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSRE--------ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQ 75 (303)
T ss_dssp CCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-TT--------HHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEE
T ss_pred eeehhhccCCCCeEEEEEEEc-CcceEEEEecccc--------hhhHHHHHHHHHHHhccCcceeeeeeecccCCCccce
Confidence 366788999999999999875 8899999875321 2457778888887 799999999999876542 24
Q ss_pred EEEEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHh--------cCCCCeEeeCCCCCCeEeCCCCcEEEe
Q 004979 505 RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMH--------QLTPPIAHRNLQSSSIYLTEDYAAKIS 576 (721)
Q Consensus 505 ~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH--------~~~~~IvHrDLKp~NILl~~~~~~kL~ 576 (721)
.++||||+++|+|.+++.. ..+++..+..++.|++.||+||| +.+ |+||||||+|||++.++.+||+
T Consensus 76 ~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~--ivH~Dlkp~Nil~~~~~~~kl~ 150 (303)
T 3gxj_A 76 LWLVSDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA--IAHRDLKSKNILVKKNGTCCIA 150 (303)
T ss_dssp EEEEEECCTTCCHHHHHHH---CCBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC---CCCSCCCGGGC-CCTTCCC-BC
T ss_pred eEEEEeccCCCCHHHHHhc---cCcchHHHHHHHHHHHHHHHHHHHHHhhhccCCC--EeeCcCCHHHeEECCCCCEEEe
Confidence 6999999999999999953 35788889999999999999999 766 9999999999999999999999
Q ss_pred ccCCCCCCC-------------CCCccccchhhcccC------CCCCCccHHHHHHHHHHHHhC----------CCcccC
Q 004979 577 DFSFWNNTT-------------AAKTGSAAMELLETS------AVDLESNVYSFGTILFEMITG----------RISYSI 627 (721)
Q Consensus 577 DFGla~~~~-------------~~~~~~~apE~~~~~------~~s~ksDVwSfGvvL~ElltG----------~~P~~~ 627 (721)
|||+++... .++..|+|||.+... .++.++|||||||++|||+|| +.||..
T Consensus 151 DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~ 230 (303)
T 3gxj_A 151 DLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYD 230 (303)
T ss_dssp CCCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTT
T ss_pred ecCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccc
Confidence 999874221 356679999998765 344689999999999999999 566642
Q ss_pred CC---CCHHHHHHHHhhcCCCCccccCCcccc--ccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcC
Q 004979 628 EN---GSLENWASEYLKGEQPLKDIVDPTLKS--FQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAME 697 (721)
Q Consensus 628 ~~---~~~~~~~~~~~~~~~~~~~~~d~~l~~--~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 697 (721)
.. ....+........ ...+.... ....++..+.+++.+||+.||++|||+.||++.|+++.+..
T Consensus 231 ~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~~ 299 (303)
T 3gxj_A 231 LVPSDPSVEEMRKVVCEQ------KLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299 (303)
T ss_dssp TCC-CCCCC-CHHHHTTS------CCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC-
T ss_pred cCCCCccHHHHHHHHHHh------hcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhhc
Confidence 21 1111111111111 11111111 12366778999999999999999999999999999887654
No 203
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=6.3e-37 Score=345.15 Aligned_cols=244 Identities=21% Similarity=0.256 Sum_probs=198.9
Q ss_pred hhhhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEE
Q 004979 428 FSNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRM 506 (721)
Q Consensus 428 ~~~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~ 506 (721)
.|++.+.+|+|+||+||+|+.. ++..||||++....... ....+.+.+|++++++++|||||++++++.+.+ ..+
T Consensus 27 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--~~~ 102 (484)
T 3nyv_A 27 RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQ--KTDKESLLREVQLLKQLDHPNIMKLYEFFEDKG--YFY 102 (484)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCB--SSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEE
T ss_pred ceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhccc--chHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC--EEE
Confidence 3577888999999999999965 78899999986543221 122467999999999999999999999998876 679
Q ss_pred EEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEe---CCCCcEEEeccCCCCC
Q 004979 507 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYL---TEDYAAKISDFSFWNN 583 (721)
Q Consensus 507 lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl---~~~~~~kL~DFGla~~ 583 (721)
+||||+.+|+|.+++.. ...+++..+..|+.||+.||+|||+.+ |+||||||+|||+ +.++.+||+|||+++.
T Consensus 103 lv~e~~~~~~L~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~--ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 178 (484)
T 3nyv_A 103 LVGEVYTGGELFDEIIS--RKRFSEVDAARIIRQVLSGITYMHKNK--IVHRDLKPENLLLESKSKDANIRIIDFGLSTH 178 (484)
T ss_dssp EEECCCCSCBHHHHHHT--CSCCBHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEESSSSTTCCEEECCTTHHHH
T ss_pred EEEecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC--eeeCCCCHHHEEEecCCCCCcEEEEeeeeeEE
Confidence 99999999999998863 356999999999999999999999998 9999999999999 5678999999998753
Q ss_pred CC--------CCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccc
Q 004979 584 TT--------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLK 655 (721)
Q Consensus 584 ~~--------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 655 (721)
.. .++..|+|||.+.+ .++.++||||+||++|||+||+.||... +..+....+..+......
T Consensus 179 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~--~~~~~~~~i~~~~~~~~~------- 248 (484)
T 3nyv_A 179 FEASKKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGA--NEYDILKKVEKGKYTFEL------- 248 (484)
T ss_dssp BCCCCSHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHCCCCCCS-------
T ss_pred cccccccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCC--CHHHHHHHHHcCCCCCCC-------
Confidence 22 24567999999865 6999999999999999999999999643 334444444443222110
Q ss_pred cccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004979 656 SFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 689 (721)
Q Consensus 656 ~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 689 (721)
.....++.++.+++.+||+.||++|||+.|+++.
T Consensus 249 ~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 282 (484)
T 3nyv_A 249 PQWKKVSESAKDLIRKMLTYVPSMRISARDALDH 282 (484)
T ss_dssp GGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred cccccCCHHHHHHHHHHCCCChhHCcCHHHHhhC
Confidence 1113456778999999999999999999999863
No 204
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=1.7e-36 Score=341.76 Aligned_cols=242 Identities=21% Similarity=0.271 Sum_probs=197.6
Q ss_pred hhhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEEE
Q 004979 429 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 507 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~l 507 (721)
|++++.||+|+||+||+|+.. ++..||||++....... .....+.+|++++++++|||||++++++.+.+ ..++
T Consensus 24 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--~~~l 98 (486)
T 3mwu_A 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKN---KDTSTILREVELLKKLDHPNIMKLFEILEDSS--SFYI 98 (486)
T ss_dssp EEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBC---SCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEE
T ss_pred eEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccc---hHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCC--EEEE
Confidence 578899999999999999965 78899999986432211 12467899999999999999999999998876 6799
Q ss_pred EEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeC---CCCcEEEeccCCCCCC
Q 004979 508 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLT---EDYAAKISDFSFWNNT 584 (721)
Q Consensus 508 V~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~---~~~~~kL~DFGla~~~ 584 (721)
||||+++|+|.+++... ..+++..+..|+.||+.||+|||+.+ |+||||||+|||++ .++.+||+|||+++..
T Consensus 99 v~e~~~~~~L~~~~~~~--~~~~~~~~~~i~~qi~~al~~lH~~~--ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 174 (486)
T 3mwu_A 99 VGELYTGGELFDEIIKR--KRFSEHDAARIIKQVFSGITYMHKHN--IVHRDLKPENILLESKEKDCDIKIIDFGLSTCF 174 (486)
T ss_dssp EECCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEESSSSTTCCEEECSCSCTTTB
T ss_pred EEEcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC--eEeccCchHHEEEecCCCCCCEEEEECCcCeEC
Confidence 99999999999988643 46899999999999999999999998 99999999999995 5668999999998633
Q ss_pred --------CCCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccc
Q 004979 585 --------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKS 656 (721)
Q Consensus 585 --------~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 656 (721)
..++..|+|||.+.+ .++.++||||+||++|||++|+.||... +..+....+..+...... .
T Consensus 175 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~--~~~~~~~~i~~~~~~~~~-------~ 244 (486)
T 3mwu_A 175 QQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGK--NEYDILKRVETGKYAFDL-------P 244 (486)
T ss_dssp CCC----CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHTCCCSCS-------G
T ss_pred CCCCccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCC--CHHHHHHHHHhCCCCCCC-------c
Confidence 235668999999875 5999999999999999999999999643 344444444443222110 1
Q ss_pred ccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004979 657 FQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 689 (721)
Q Consensus 657 ~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 689 (721)
....++.++.+++.+||+.||++|||+.|+++.
T Consensus 245 ~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 245 QWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp GGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred ccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 113455778999999999999999999999874
No 205
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=1.9e-36 Score=329.34 Aligned_cols=249 Identities=18% Similarity=0.224 Sum_probs=190.0
Q ss_pred hhhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCC----c
Q 004979 429 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEP----F 503 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~----~ 503 (721)
+++++.+|+|+||+||+|+.. ++..||||++..... .....+.+.+|++++++++||||+++++++...+. .
T Consensus 27 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 27 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ---NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTS---SHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred eeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccC---ChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 367788999999999999854 688899998864321 13345678999999999999999999999976542 2
Q ss_pred eEEEEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCC
Q 004979 504 TRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN 583 (721)
Q Consensus 504 ~~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~ 583 (721)
..++||||++ |+|.+++. ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 104 ~~~lv~e~~~-~~l~~~~~----~~~~~~~~~~i~~qi~~al~~lH~~~--ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~ 176 (371)
T 2xrw_A 104 DVYIVMELMD-ANLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLART 176 (371)
T ss_dssp EEEEEEECCS-EEHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECTTSCEEECCCCC---
T ss_pred ceEEEEEcCC-CCHHHHHh----hccCHHHHHHHHHHHHHHHHHHHHCC--eecccCCHHHEEEcCCCCEEEEEeecccc
Confidence 5799999996 57888874 34899999999999999999999998 99999999999999999999999999864
Q ss_pred CC--------CCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCC-CCcc------
Q 004979 584 TT--------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQ-PLKD------ 648 (721)
Q Consensus 584 ~~--------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~-~~~~------ 648 (721)
.. .++..|+|||.+.+..++.++|||||||++|||+||+.||...+ ..+....+..... +..+
T Consensus 177 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~--~~~~~~~i~~~~~~~~~~~~~~~~ 254 (371)
T 2xrw_A 177 AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTD--HIDQWNKVIEQLGTPCPEFMKKLQ 254 (371)
T ss_dssp -------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHHC-CCCCCHHHHTTSC
T ss_pred cccccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHHHhCCCCHHHHHHhh
Confidence 32 24557999999999999999999999999999999999996432 2222222221110 0000
Q ss_pred ------------------------ccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004979 649 ------------------------IVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 689 (721)
Q Consensus 649 ------------------------~~d~~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 689 (721)
..-+...........++.+|+.+||+.||++|||++|+++.
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 319 (371)
T 2xrw_A 255 PTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 319 (371)
T ss_dssp HHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred hHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence 00000011122346789999999999999999999999874
No 206
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=1.1e-36 Score=329.94 Aligned_cols=263 Identities=18% Similarity=0.196 Sum_probs=196.1
Q ss_pred HHHHHHhhhhhhhCcCCCCceeEEEEEEecCCcEEEEEEeeeccccc------hhhHHHHHHHHHHHHHhcCCCCccceE
Q 004979 420 ELEAACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRAD------WSKNLESQFRKKIDTLSKVNHKNFVNL 493 (721)
Q Consensus 420 ~l~~~~~~~~~ii~~lg~G~~g~Vyk~~~~~~~~vavk~~~~~~~~~------~~~~~~~~f~~Ei~~l~~l~H~nIv~l 493 (721)
++....+. +.+.+.+|+|+||.||+|+..++..||||++....... ......+.+.+|++++++++||||+++
T Consensus 16 ~~~~~~~~-y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~ 94 (362)
T 3pg1_A 16 ELHAMQSP-YTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGL 94 (362)
T ss_dssp HHHHTTCS-CEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCC
T ss_pred HHHHhccc-eEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccce
Confidence 33333333 37788999999999999998889999999886533211 112334789999999999999999999
Q ss_pred eEEEecCC---CceEEEEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCC
Q 004979 494 IGYCEEDE---PFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTED 570 (721)
Q Consensus 494 ~g~~~~~~---~~~~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~ 570 (721)
++++...+ ....++||||+. |+|.+++.. ....+++..+..|+.||+.||+|||+.+ |+||||||+|||++.+
T Consensus 95 ~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~Dlkp~NIl~~~~ 170 (362)
T 3pg1_A 95 RDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHD-QRIVISPQHIQYFMYHILLGLHVLHEAG--VVHRDLHPGNILLADN 170 (362)
T ss_dssp SEEEEECCTTTCCEEEEEEECCS-EEHHHHHHC-TTSCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTT
T ss_pred eeeEEeccCCCcceEEEEEccCC-CCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCc--CEecCCChHHEEEcCC
Confidence 99986422 225799999997 688888863 3456999999999999999999999998 9999999999999999
Q ss_pred CcEEEeccCCCCCCC--------CCCccccchhhccc-CCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhh
Q 004979 571 YAAKISDFSFWNNTT--------AAKTGSAAMELLET-SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLK 641 (721)
Q Consensus 571 ~~~kL~DFGla~~~~--------~~~~~~~apE~~~~-~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~ 641 (721)
+.+||+|||+++... .++..|+|||.+.+ ..++.++|||||||++|||+||+.||.... ..+....+..
T Consensus 171 ~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~--~~~~~~~i~~ 248 (362)
T 3pg1_A 171 NDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGST--FYNQLNKIVE 248 (362)
T ss_dssp CCEEECCTTC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHHH
T ss_pred CCEEEEecCcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCC--HHHHHHHHHH
Confidence 999999999986322 23456899999876 778999999999999999999999996432 2222222211
Q ss_pred c--CCC-------------------CccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004979 642 G--EQP-------------------LKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 689 (721)
Q Consensus 642 ~--~~~-------------------~~~~~d~~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 689 (721)
. ... ...................+.+|+.+||+.||++|||+.|+++.
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 317 (362)
T 3pg1_A 249 VVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH 317 (362)
T ss_dssp HHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence 0 000 00000111111223345678999999999999999999999873
No 207
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=5.6e-37 Score=321.04 Aligned_cols=242 Identities=18% Similarity=0.249 Sum_probs=184.4
Q ss_pred hhhhCcCCCCceeEEEEEEe-cCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEEE
Q 004979 429 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 507 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~-~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~l 507 (721)
+++++.+|+|+||+||+|+. .+++.||+|++..... .....+.+.++...++.++||||+++++++.+.+ ..++
T Consensus 9 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~--~~~l 83 (290)
T 3fme_A 9 LEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVN---SQEQKRLLMDLDISMRTVDCPFTVTFYGALFREG--DVWI 83 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---C---HHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--SEEE
T ss_pred hhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccC---cHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccC--CEEE
Confidence 36788999999999999996 4788999998864322 1223344556666688899999999999999876 6799
Q ss_pred EEecCCCCChhhhhhhc--cCCCCCHHHHHHHHHHHHHHHHHHhcC-CCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCC
Q 004979 508 VFEYSPNGSLFEHLHIQ--EAEHLDWAMRLRIAMGMAYCLEHMHQL-TPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT 584 (721)
Q Consensus 508 V~Ey~~~GsL~~~l~~~--~~~~l~~~~~~~ia~~ia~gL~yLH~~-~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~ 584 (721)
||||++ |+|.+++... ....+++..+..|+.|++.||+|||+. + |+||||||+|||++.++.+||+|||+++..
T Consensus 84 v~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~--i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 160 (290)
T 3fme_A 84 CMELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYL 160 (290)
T ss_dssp EEECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSC--CCCCCCSGGGCEECTTCCEEBCCC------
T ss_pred EEehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCC--eecCCCCHHHEEECCCCCEEEeecCCcccc
Confidence 999997 5888877532 356799999999999999999999986 8 999999999999999999999999987532
Q ss_pred --------CCCCccccchhhc----ccCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCccccCC
Q 004979 585 --------TAAKTGSAAMELL----ETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDP 652 (721)
Q Consensus 585 --------~~~~~~~~apE~~----~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 652 (721)
..++..|+|||.+ ....++.++|||||||++|||+||+.||......... .........+. .
T Consensus 161 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~-~~~~~~~~~~~--~--- 234 (290)
T 3fme_A 161 VDDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQ-LKQVVEEPSPQ--L--- 234 (290)
T ss_dssp ---------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHH-HHHHHHSCCCC--C---
T ss_pred cccccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHH-HHHHhccCCCC--c---
Confidence 2355679999996 5667899999999999999999999999643333322 22222221111 0
Q ss_pred ccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004979 653 TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 688 (721)
Q Consensus 653 ~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 688 (721)
.....+.++.+++.+||+.||++|||+.|+++
T Consensus 235 ----~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 235 ----PADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp ----CTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred ----ccccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 11234567899999999999999999999987
No 208
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=1.1e-36 Score=328.50 Aligned_cols=251 Identities=19% Similarity=0.245 Sum_probs=189.5
Q ss_pred hhhhCcCCCCceeEEEEEEe-cCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCC------
Q 004979 429 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDE------ 501 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~-~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~------ 501 (721)
+++++.+|+|+||+||+|+. .+++.||+|++....... .....+.+|++++++++||||+++++++....
T Consensus 19 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 19 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKE---GFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp EEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSS---SSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred eeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccc---cchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 47788999999999999997 578899999886543222 12346789999999999999999999987643
Q ss_pred CceEEEEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCC
Q 004979 502 PFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW 581 (721)
Q Consensus 502 ~~~~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla 581 (721)
....++||||+++ +|.+.+.. ....+++..+..|+.|++.||+|||+++ |+||||||+|||++.++.+||+|||++
T Consensus 96 ~~~~~lv~e~~~~-~l~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~--ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 171 (351)
T 3mi9_A 96 KGSIYLVFDFCEH-DLAGLLSN-VLVKFTLSEIKRVMQMLLNGLYYIHRNK--ILHRDMKAANVLITRDGVLKLADFGLA 171 (351)
T ss_dssp -CEEEEEEECCSE-EHHHHHHC-TTSCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred CceEEEEEeccCC-CHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC--eeCCCCCHHHEEEcCCCCEEEccchhc
Confidence 1257999999974 77777753 3356999999999999999999999998 999999999999999999999999987
Q ss_pred CCCC-------------CCCccccchhhccc-CCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhh--cCCC
Q 004979 582 NNTT-------------AAKTGSAAMELLET-SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLK--GEQP 645 (721)
Q Consensus 582 ~~~~-------------~~~~~~~apE~~~~-~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~--~~~~ 645 (721)
+... .++..|+|||.+.+ ..++.++|||||||++|||+||+.||..... ......+.. +..+
T Consensus 172 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~--~~~~~~i~~~~~~~~ 249 (351)
T 3mi9_A 172 RAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTE--QHQLALISQLCGSIT 249 (351)
T ss_dssp EECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHHHHHHCCCC
T ss_pred ccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCCh--HHHHHHHHHHhCCCC
Confidence 5321 23456899998865 5689999999999999999999999974332 222211111 1111
Q ss_pred Cc---cc-----------cCCccccccHH-----HHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004979 646 LK---DI-----------VDPTLKSFQEN-----VLEELLVVIKNCVHPDPKQRPSMRGIAA 688 (721)
Q Consensus 646 ~~---~~-----------~d~~l~~~~~~-----~~~~l~~li~~Cl~~dP~~RPs~~evl~ 688 (721)
.. .. ........... ...++.+|+.+||+.||++|||+.|+++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 311 (351)
T 3mi9_A 250 PEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 311 (351)
T ss_dssp TTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhC
Confidence 00 00 00000000111 1356889999999999999999999987
No 209
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=5.1e-37 Score=329.45 Aligned_cols=240 Identities=18% Similarity=0.270 Sum_probs=190.1
Q ss_pred hhhCcCCCCceeEEEEEEe-cCCcEEEEEEeeeccccchhhHHHHHHHHHHHH-HhcCCCCccceEeEEEecCCCceEEE
Q 004979 430 NIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDT-LSKVNHKNFVNLIGYCEEDEPFTRMM 507 (721)
Q Consensus 430 ~ii~~lg~G~~g~Vyk~~~-~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~-l~~l~H~nIv~l~g~~~~~~~~~~~l 507 (721)
++++.+|+|+||+||+|+. .+++.||||++...... ....++..|+.+ ++.++||||+++++++.+.+ ..++
T Consensus 54 ~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~----~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~--~~~l 127 (340)
T 3an0_A 54 EPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNS----QEQKRLLMDLDISMRTVDCPFTVTFYGALFREG--DVWI 127 (340)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCC----HHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSS--CEEE
T ss_pred eEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCc----HHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCC--cEEE
Confidence 5677899999999999996 57889999988654221 223455566655 78889999999999998876 6799
Q ss_pred EEecCCCCChhhhhhhc--cCCCCCHHHHHHHHHHHHHHHHHHhcC-CCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCC
Q 004979 508 VFEYSPNGSLFEHLHIQ--EAEHLDWAMRLRIAMGMAYCLEHMHQL-TPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT 584 (721)
Q Consensus 508 V~Ey~~~GsL~~~l~~~--~~~~l~~~~~~~ia~~ia~gL~yLH~~-~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~ 584 (721)
||||+++ +|.+++... ....+++..+..|+.||+.||+|||+. + |+||||||+|||++.++.+||+|||+++..
T Consensus 128 v~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~~--ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~ 204 (340)
T 3an0_A 128 CMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYL 204 (340)
T ss_dssp EECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHTC--CCCCSCCSTTEEECSTTCEEECCCSHHHHH
T ss_pred EHHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCC--eecCCCCHHHEEECCCCCEEEeeCCCceec
Confidence 9999975 998888632 456799999999999999999999985 7 999999999999999999999999987532
Q ss_pred --------CCCCccccchhhcc----cCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCccccCC
Q 004979 585 --------TAAKTGSAAMELLE----TSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDP 652 (721)
Q Consensus 585 --------~~~~~~~~apE~~~----~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 652 (721)
..++..|+|||.+. ...++.++|||||||++|||+||+.||....... ..+........+.
T Consensus 205 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~-~~~~~~~~~~~~~------ 277 (340)
T 3an0_A 205 VDSVAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPF-QQLKQVVEEPSPQ------ 277 (340)
T ss_dssp SCHHHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHH-HHHHHHHHSCCCC------
T ss_pred ccccccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchH-HHHHHHhcCCCCC------
Confidence 34667899999964 4478999999999999999999999996433322 2233333221110
Q ss_pred ccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004979 653 TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 688 (721)
Q Consensus 653 ~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 688 (721)
. ....++.++.+++.+||+.||++||++.|+++
T Consensus 278 -~--~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 310 (340)
T 3an0_A 278 -L--PADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 310 (340)
T ss_dssp -C--CGGGSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred -C--CcccCCHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 0 11234577999999999999999999999987
No 210
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=1.6e-36 Score=319.03 Aligned_cols=245 Identities=20% Similarity=0.290 Sum_probs=196.5
Q ss_pred hhhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccc----hhhHHHHHHHHHHHHHhcCC-CCccceEeEEEecCCC
Q 004979 429 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRAD----WSKNLESQFRKKIDTLSKVN-HKNFVNLIGYCEEDEP 502 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~----~~~~~~~~f~~Ei~~l~~l~-H~nIv~l~g~~~~~~~ 502 (721)
+++.+.+|+|+||.||+|+.. +++.||||++....... ......+.+.+|++++++++ ||||+++++++...+
T Consensus 19 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~- 97 (298)
T 1phk_A 19 YEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNT- 97 (298)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSS-
T ss_pred cceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeeccCC-
Confidence 367788999999999999975 67889999986543111 11234567899999999995 999999999998776
Q ss_pred ceEEEEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCC
Q 004979 503 FTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWN 582 (721)
Q Consensus 503 ~~~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~ 582 (721)
..++||||+++|+|.+++.. ...+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||++.
T Consensus 98 -~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~p~Nil~~~~~~~kl~dfg~~~ 172 (298)
T 1phk_A 98 -FFFLVFDLMKKGELFDYLTE--KVTLSEKETRKIMRALLEVICALHKLN--IVHRDLKPENILLDDDMNIKLTDFGFSC 172 (298)
T ss_dssp -EEEEEEECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred -eEEEEEeccCCCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCcceEEEcCCCcEEEecccchh
Confidence 67999999999999999864 346899999999999999999999998 9999999999999999999999999875
Q ss_pred CCC--------CCCccccchhhcc------cCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCcc
Q 004979 583 NTT--------AAKTGSAAMELLE------TSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKD 648 (721)
Q Consensus 583 ~~~--------~~~~~~~apE~~~------~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~ 648 (721)
... .++..|+|||.+. ...++.++||||||+++|||++|+.||... ...........+.....
T Consensus 173 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~--~~~~~~~~~~~~~~~~~- 249 (298)
T 1phk_A 173 QLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHR--KQMLMLRMIMSGNYQFG- 249 (298)
T ss_dssp ECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHTCCCCC-
T ss_pred hcCCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCc--cHHHHHHHHhcCCcccC-
Confidence 322 2455789999874 456889999999999999999999999643 33333333333322111
Q ss_pred ccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004979 649 IVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 688 (721)
Q Consensus 649 ~~d~~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 688 (721)
.+ ....++.++.+++.+||+.||++||++.|+++
T Consensus 250 --~~----~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 250 --SP----EWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp --TT----TGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred --cc----cccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 11 11245577899999999999999999999975
No 211
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=1.9e-37 Score=326.57 Aligned_cols=248 Identities=20% Similarity=0.277 Sum_probs=179.1
Q ss_pred hhhhCcCCCCceeEEEEEEe-cCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEEE
Q 004979 429 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 507 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~-~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~l 507 (721)
+++.+.+|+|+||+||+|+. .++..||||++..... ....+.+.+|++++++++||||+++++++...+ ..++
T Consensus 17 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~l 90 (303)
T 2vwi_A 17 YELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKC----QTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKD--ELWL 90 (303)
T ss_dssp CEEEEECC---CCCEEEEEC----CEEEEECCC--------------------CCCCCCCTTBCCEEEEEESSS--CEEE
T ss_pred hhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhc----chhHHHHHHHHHHHhhcCCCCEeeEEEEEeecC--CcEE
Confidence 36778899999999999985 4688999998764321 123467889999999999999999999998877 6799
Q ss_pred EEecCCCCChhhhhhhc------cCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCC
Q 004979 508 VFEYSPNGSLFEHLHIQ------EAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW 581 (721)
Q Consensus 508 V~Ey~~~GsL~~~l~~~------~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla 581 (721)
||||+++|+|.+++... ....+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||++
T Consensus 91 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--i~H~dl~p~Nil~~~~~~~kl~dfg~~ 168 (303)
T 2vwi_A 91 VMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG--QIHRDVKAGNILLGEDGSVQIADFGVS 168 (303)
T ss_dssp EEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCSGGGEEECTTCCEEECCCHHH
T ss_pred EehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCC--CCCCCCChhhEEEcCCCCEEEEeccch
Confidence 99999999999998631 2356899999999999999999999998 999999999999999999999999976
Q ss_pred CCC--------------CCCCccccchhhccc-CCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCC-
Q 004979 582 NNT--------------TAAKTGSAAMELLET-SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQP- 645 (721)
Q Consensus 582 ~~~--------------~~~~~~~~apE~~~~-~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~- 645 (721)
... ..++..|+|||.+.. ..++.++|||||||++|||+||+.||...... ...........+
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~~~~~~~~~ 246 (303)
T 2vwi_A 169 AFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPM--KVLMLTLQNDPPS 246 (303)
T ss_dssp HHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGG--GHHHHHHTSSCCC
T ss_pred heeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchh--hHHHHHhccCCCc
Confidence 422 124557999999865 57899999999999999999999999643321 112222222111
Q ss_pred CccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004979 646 LKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 688 (721)
Q Consensus 646 ~~~~~d~~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 688 (721)
..... ........++.++.+++.+||+.||++||++.|+++
T Consensus 247 ~~~~~--~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 247 LETGV--QDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp TTC-------CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred ccccc--ccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 10000 001112234567899999999999999999999986
No 212
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=8.2e-37 Score=329.36 Aligned_cols=256 Identities=16% Similarity=0.187 Sum_probs=194.8
Q ss_pred hhhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCC---Cce
Q 004979 429 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDE---PFT 504 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~---~~~ 504 (721)
+++.+.+|+|+||+||+|+.. ++..||||++.... .......+.+|++++++++||||+++++++.... ...
T Consensus 13 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 88 (353)
T 2b9h_A 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFD----KPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNE 88 (353)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCS----SHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCC
T ss_pred eEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccc----cchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccce
Confidence 367788999999999999965 68889999885322 1334567889999999999999999999987541 125
Q ss_pred EEEEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCC
Q 004979 505 RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT 584 (721)
Q Consensus 505 ~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~ 584 (721)
.++||||+. |+|.+++.. ..+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++..
T Consensus 89 ~~lv~e~~~-~~L~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~~--ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~ 162 (353)
T 2b9h_A 89 VYIIQELMQ-TDLHRVIST---QMLSDDHIQYFIYQTLRAVKVLHGSN--VIHRDLKPSNLLINSNCDLKVCDFGLARII 162 (353)
T ss_dssp EEEEECCCS-EEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEEeccC-ccHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHeEEcCCCcEEEEeccccccc
Confidence 799999996 699998853 46899999999999999999999998 999999999999999999999999987532
Q ss_pred C-------------------CCCccccchhhcc-cCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHh--hc
Q 004979 585 T-------------------AAKTGSAAMELLE-TSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYL--KG 642 (721)
Q Consensus 585 ~-------------------~~~~~~~apE~~~-~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~--~~ 642 (721)
. .++..|+|||.+. ...++.++|||||||++|||++|+.||...+. ......+. .+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--~~~~~~~~~~~~ 240 (353)
T 2b9h_A 163 DESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDY--RHQLLLIFGIIG 240 (353)
T ss_dssp C----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHHHHHHC
T ss_pred ccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCc--HHHHHHHHHHhC
Confidence 2 2355689999875 47789999999999999999999999964432 11111111 11
Q ss_pred CCCCcc----c---------------cCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HHHhhhc
Q 004979 643 EQPLKD----I---------------VDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK--LKEITAM 696 (721)
Q Consensus 643 ~~~~~~----~---------------~d~~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~--L~~i~~~ 696 (721)
...... + ............+.++.+++.+||+.||++|||+.|+++. ++.+...
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~~ 315 (353)
T 2b9h_A 241 TPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYHDP 315 (353)
T ss_dssp CCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTCCT
T ss_pred CCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCccccccCCc
Confidence 110000 0 0000111123456788999999999999999999999873 5544443
No 213
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=6.7e-37 Score=339.77 Aligned_cols=189 Identities=17% Similarity=0.186 Sum_probs=159.0
Q ss_pred hhhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCC---ce
Q 004979 429 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEP---FT 504 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~---~~ 504 (721)
+++++.+|+|+||+||+|+.. +++.||||++..... .....+++.+|+++|++++|||||++++++...+. ..
T Consensus 28 y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~---~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 28 YIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFE---DLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTT---SHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred EEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhc---ChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 467888999999999999964 578899998864321 23345689999999999999999999999976531 25
Q ss_pred EEEEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCC
Q 004979 505 RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT 584 (721)
Q Consensus 505 ~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~ 584 (721)
.|+||||+. |+|.+++. ....+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 105 ~~lv~e~~~-~~L~~~~~--~~~~l~~~~~~~i~~qil~aL~~LH~~g--ivHrDlkp~NILl~~~~~~kL~DFGla~~~ 179 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFK--TPIFLTEEHIKTILYNLLLGENFIHESG--IIHRDLKPANCLLNQDCSVKVCDFGLARTI 179 (432)
T ss_dssp EEEEEECCS-EEHHHHHH--SSCCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEEecCC-cCHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCC--CCCCCCCHHHeEECCCCCEEEccCCCcccc
Confidence 799999986 69999985 3456999999999999999999999998 999999999999999999999999998632
Q ss_pred C-------------------------------CCCccccchhhc-ccCCCCCCccHHHHHHHHHHHHhCCCcc
Q 004979 585 T-------------------------------AAKTGSAAMELL-ETSAVDLESNVYSFGTILFEMITGRISY 625 (721)
Q Consensus 585 ~-------------------------------~~~~~~~apE~~-~~~~~s~ksDVwSfGvvL~ElltG~~P~ 625 (721)
. .++..|+|||.+ ....++.++||||+||++|||+||..||
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~ 252 (432)
T 3n9x_A 180 NSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSH 252 (432)
T ss_dssp -------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTT
T ss_pred cccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccccc
Confidence 2 235569999986 5667999999999999999999865544
No 214
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=1.2e-36 Score=324.14 Aligned_cols=245 Identities=21% Similarity=0.288 Sum_probs=189.4
Q ss_pred hhhhhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccc---hhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCC
Q 004979 427 DFSNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRAD---WSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEP 502 (721)
Q Consensus 427 ~~~~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~---~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~ 502 (721)
+-+++++.+|+|+||.||+|+.. +++.||||++....... ........+.+|++++++++||||+++++++...+
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 88 (322)
T 2ycf_A 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED- 88 (322)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS-
T ss_pred hceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc-
Confidence 33578889999999999999965 57889999886543210 11122346889999999999999999999987654
Q ss_pred ceEEEEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCc---EEEeccC
Q 004979 503 FTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYA---AKISDFS 579 (721)
Q Consensus 503 ~~~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~---~kL~DFG 579 (721)
.++||||+++|+|.+++. ....+++.....++.||+.||+|||+++ |+||||||+|||++.++. +||+|||
T Consensus 89 --~~lv~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~dlkp~NIl~~~~~~~~~~kl~Dfg 162 (322)
T 2ycf_A 89 --YYIVLELMEGGELFDKVV--GNKRLKEATCKLYFYQMLLAVQYLHENG--IIHRDLKPENVLLSSQEEDCLIKITDFG 162 (322)
T ss_dssp --EEEEEECCTTEETHHHHS--TTCCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEESSSSSSCCEEECCCT
T ss_pred --eEEEEecCCCCcHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHHHEEEecCCCCCeEEEccCc
Confidence 589999999999999885 3456899999999999999999999998 999999999999987654 9999999
Q ss_pred CCCCCCC--------CCccccchhhcc---cCCCCCCccHHHHHHHHHHHHhCCCcccCCCC--CHHHHHHHHhhcCCCC
Q 004979 580 FWNNTTA--------AKTGSAAMELLE---TSAVDLESNVYSFGTILFEMITGRISYSIENG--SLENWASEYLKGEQPL 646 (721)
Q Consensus 580 la~~~~~--------~~~~~~apE~~~---~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~--~~~~~~~~~~~~~~~~ 646 (721)
+++.... ++..|+|||.+. ...++.++|||||||++|||+||+.||..... .....+ ..+....
T Consensus 163 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~---~~~~~~~ 239 (322)
T 2ycf_A 163 HSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI---TSGKYNF 239 (322)
T ss_dssp TCEECCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHH---HHTCCCC
T ss_pred cceecccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHH---HhCcccc
Confidence 9865432 456799999873 56789999999999999999999999974332 222211 1111110
Q ss_pred ccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004979 647 KDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 688 (721)
Q Consensus 647 ~~~~d~~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 688 (721)
........+.++.+++.+||+.||++||++.|+++
T Consensus 240 -------~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 240 -------IPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp -------CHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred -------CchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 01111234578899999999999999999999984
No 215
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=2.4e-36 Score=321.85 Aligned_cols=252 Identities=18% Similarity=0.234 Sum_probs=192.6
Q ss_pred hhhhCcCCCCceeEEEEEEe--cCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcC---CCCccceEeEEEec---C
Q 004979 429 SNIIGSFSDGTVGTVYKGTL--SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV---NHKNFVNLIGYCEE---D 500 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~--~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l---~H~nIv~l~g~~~~---~ 500 (721)
+++++.+|+|+||+||+|+. .+++.||+|++........ ....+.+|+++++++ +||||+++++++.. .
T Consensus 13 y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~---~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~ 89 (326)
T 1blx_A 13 YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEG---MPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD 89 (326)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTS---CBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECS
T ss_pred eeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCccccc---CCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccC
Confidence 47788999999999999997 4678899998875432211 112455677666655 89999999999872 1
Q ss_pred CCceEEEEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCC
Q 004979 501 EPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF 580 (721)
Q Consensus 501 ~~~~~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGl 580 (721)
.....++||||+. |+|.+++.......+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+
T Consensus 90 ~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~g--i~H~dlkp~Nili~~~~~~kl~Dfg~ 166 (326)
T 1blx_A 90 RETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR--VVHRDLKPQNILVTSSGQIKLADFGL 166 (326)
T ss_dssp SEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTCCEEECSCCS
T ss_pred CCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCCHHHeEEcCCCCEEEecCcc
Confidence 2236799999997 69999997655566999999999999999999999998 99999999999999999999999999
Q ss_pred CCCCC--------CCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhc--CCCCccc-
Q 004979 581 WNNTT--------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKG--EQPLKDI- 649 (721)
Q Consensus 581 a~~~~--------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~--~~~~~~~- 649 (721)
++... .++..|+|||.+.+..++.++|||||||++|||+||+.||.... ..+....+... ......+
T Consensus 167 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~--~~~~~~~i~~~~~~~~~~~~~ 244 (326)
T 1blx_A 167 ARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSS--DVDQLGKILDVIGLPGEEDWP 244 (326)
T ss_dssp CCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHHHHHCCCCGGGSC
T ss_pred cccccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCC--HHHHHHHHHHHcCCCCcccCc
Confidence 86432 24567899999999999999999999999999999999996432 22222222211 0000000
Q ss_pred -------------cCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004979 650 -------------VDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 688 (721)
Q Consensus 650 -------------~d~~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 688 (721)
.......+....+.++.+++.+||+.||++||++.|+++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 245 RDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp TTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred cccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 001111223345678899999999999999999999985
No 216
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=2.3e-36 Score=342.21 Aligned_cols=244 Identities=18% Similarity=0.229 Sum_probs=193.7
Q ss_pred hhhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccch--------hhHHHHHHHHHHHHHhcCCCCccceEeEEEec
Q 004979 429 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADW--------SKNLESQFRKKIDTLSKVNHKNFVNLIGYCEE 499 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~--------~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~ 499 (721)
|.+++.||+|+||+||+|+.. ++..+|+|++........ .....+.+.+|++++++++|||||++++++.+
T Consensus 38 Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~ 117 (504)
T 3q5i_A 38 YFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFED 117 (504)
T ss_dssp EEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEEEC
T ss_pred eEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc
Confidence 477889999999999999965 578899999875432110 01234678999999999999999999999988
Q ss_pred CCCceEEEEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCC---cEEEe
Q 004979 500 DEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDY---AAKIS 576 (721)
Q Consensus 500 ~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~---~~kL~ 576 (721)
.+ ..++||||+++|+|.+++... ..+++..+..|+.||+.||+|||+.+ |+||||||+|||++.++ .+||+
T Consensus 118 ~~--~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~--ivH~Dlkp~Nil~~~~~~~~~~kl~ 191 (504)
T 3q5i_A 118 KK--YFYLVTEFYEGGELFEQIINR--HKFDECDAANIMKQILSGICYLHKHN--IVHRDIKPENILLENKNSLLNIKIV 191 (504)
T ss_dssp SS--EEEEEEECCTTCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEESSTTCCSSEEEC
T ss_pred CC--EEEEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC--eEeCCCcHHHEEEecCCCCccEEEE
Confidence 76 679999999999999998643 56999999999999999999999998 99999999999999775 69999
Q ss_pred ccCCCCCC--------CCCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCcc
Q 004979 577 DFSFWNNT--------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKD 648 (721)
Q Consensus 577 DFGla~~~--------~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~ 648 (721)
|||+++.. ..++..|+|||.+. ..++.++||||+||++|||++|+.||... +..+....+..+......
T Consensus 192 Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~--~~~~~~~~i~~~~~~~~~ 268 (504)
T 3q5i_A 192 DFGLSSFFSKDYKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQ--NDQDIIKKVEKGKYYFDF 268 (504)
T ss_dssp CCTTCEECCTTSCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHCCCCCCH
T ss_pred ECCCCEEcCCCCccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCC--CHHHHHHHHHcCCCCCCc
Confidence 99988532 23566899999986 46899999999999999999999999643 344455554444221110
Q ss_pred ccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004979 649 IVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 688 (721)
Q Consensus 649 ~~d~~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 688 (721)
.....++.++.+|+.+||+.||++|||+.|+++
T Consensus 269 -------~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~ 301 (504)
T 3q5i_A 269 -------NDWKNISDEAKELIKLMLTYDYNKRCTAEEALN 301 (504)
T ss_dssp -------HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred -------cccCCCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 011234577999999999999999999999986
No 217
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=6.8e-37 Score=335.01 Aligned_cols=251 Identities=17% Similarity=0.201 Sum_probs=192.6
Q ss_pred hhhhCcCCCCceeEEEEEEe-cCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCC--------CCccceEeEEEec
Q 004979 429 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN--------HKNFVNLIGYCEE 499 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~-~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~--------H~nIv~l~g~~~~ 499 (721)
+++++.+|+|+||+||+|+. .+++.||||++... ....+.+.+|++++++++ |+||+++++++..
T Consensus 39 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~------~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~ 112 (397)
T 1wak_A 39 YHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA------EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKI 112 (397)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC------HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEE
T ss_pred EEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC------CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceee
Confidence 47788999999999999985 46788999988532 223467889999999985 8889999999873
Q ss_pred C--CCceEEEEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcC-CCCeEeeCCCCCCeEeCCCC-----
Q 004979 500 D--EPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQL-TPPIAHRNLQSSSIYLTEDY----- 571 (721)
Q Consensus 500 ~--~~~~~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~-~~~IvHrDLKp~NILl~~~~----- 571 (721)
. +....++||||+ +|+|.+++.......+++..+..|+.||+.||+|||+. + |+||||||+|||++.++
T Consensus 113 ~~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~g--ivHrDikp~NIll~~~~~~~~~ 189 (397)
T 1wak_A 113 SGVNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCR--IIHTDIKPENILLSVNEQYIRR 189 (397)
T ss_dssp EETTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC--EECCCCSGGGEEECCCHHHHHH
T ss_pred cCCCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCC--EecCCCCHHHeeEeccchhhhh
Confidence 2 223679999999 66777777655556799999999999999999999997 7 99999999999999775
Q ss_pred --------------------------------------------cEEEeccCCCCCC------CCCCccccchhhcccCC
Q 004979 572 --------------------------------------------AAKISDFSFWNNT------TAAKTGSAAMELLETSA 601 (721)
Q Consensus 572 --------------------------------------------~~kL~DFGla~~~------~~~~~~~~apE~~~~~~ 601 (721)
.+||+|||+++.. ..++..|+|||.+.+..
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~gt~~y~aPE~~~~~~ 269 (397)
T 1wak_A 190 LAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSG 269 (397)
T ss_dssp HHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSCSCCSCGGGCCHHHHHTSC
T ss_pred hhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccCccCCCCCcccCChhhcCCC
Confidence 8999999987532 23466899999999999
Q ss_pred CCCCccHHHHHHHHHHHHhCCCcccCCCCC----HHHHHHHHhh--cCCC-------------------CccccCCc---
Q 004979 602 VDLESNVYSFGTILFEMITGRISYSIENGS----LENWASEYLK--GEQP-------------------LKDIVDPT--- 653 (721)
Q Consensus 602 ~s~ksDVwSfGvvL~ElltG~~P~~~~~~~----~~~~~~~~~~--~~~~-------------------~~~~~d~~--- 653 (721)
++.++|||||||++|||+||+.||...... .......... +..+ ...+.+..
T Consensus 270 ~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (397)
T 1wak_A 270 YNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWG 349 (397)
T ss_dssp CCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCC
T ss_pred CCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcc
Confidence 999999999999999999999999743321 1111111110 1000 00000000
Q ss_pred -------cccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004979 654 -------LKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 688 (721)
Q Consensus 654 -------l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 688 (721)
..........++.+|+.+||+.||++|||+.|+++
T Consensus 350 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 350 LFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp HHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred hhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 01234567788999999999999999999999985
No 218
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=9.5e-37 Score=338.12 Aligned_cols=189 Identities=20% Similarity=0.274 Sum_probs=162.5
Q ss_pred hhhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcC------CCCccceEeEEEecCC
Q 004979 429 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV------NHKNFVNLIGYCEEDE 501 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l------~H~nIv~l~g~~~~~~ 501 (721)
+++++.||+|+||+||+|+.. ++..||||++... ....+.+.+|++++..+ +|+||+++++++...+
T Consensus 99 y~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~------~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~ 172 (429)
T 3kvw_A 99 YEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE------KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRN 172 (429)
T ss_dssp EEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC------HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETT
T ss_pred EEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc------cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCC
Confidence 477889999999999999865 5788999988642 22335677788877766 6779999999998877
Q ss_pred CceEEEEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCc--EEEeccC
Q 004979 502 PFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYA--AKISDFS 579 (721)
Q Consensus 502 ~~~~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~--~kL~DFG 579 (721)
..++||||+. |+|.+++.......+++..+..|+.||+.||+|||+.+ |+||||||+|||++.++. +||+|||
T Consensus 173 --~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlKp~NILl~~~~~~~vkL~DFG 247 (429)
T 3kvw_A 173 --HICMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNR--IIHCDLKPENILLKQQGRSGIKVIDFG 247 (429)
T ss_dssp --EEEEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHT--EECSCCSGGGEEESSTTSCCEEECCCT
T ss_pred --eEEEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHeEEccCCCcceEEeecc
Confidence 7799999995 69999987665567999999999999999999999988 999999999999999887 9999999
Q ss_pred CCCCC------CCCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCC
Q 004979 580 FWNNT------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIE 628 (721)
Q Consensus 580 la~~~------~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~ 628 (721)
+++.. ..++..|+|||.+.+..++.++|||||||++|||+||+.||...
T Consensus 248 ~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~ 302 (429)
T 3kvw_A 248 SSCYEHQRVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGE 302 (429)
T ss_dssp TCEETTCCCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cceecCCcccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCC
Confidence 97532 23456799999999999999999999999999999999999644
No 219
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.4e-36 Score=323.75 Aligned_cols=241 Identities=20% Similarity=0.306 Sum_probs=191.3
Q ss_pred hhhhCcCCCCceeEEEEEEe-cCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcC-CCCccceEeEEEecCC----C
Q 004979 429 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDE----P 502 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~-~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l-~H~nIv~l~g~~~~~~----~ 502 (721)
+++++.+|+|+||.||+|+. .+++.||+|++..... ..+.+.+|++++.++ +||||+++++++.... .
T Consensus 26 y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~------~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~ 99 (326)
T 2x7f_A 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD------EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD 99 (326)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS------TTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCC
T ss_pred EEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcc------cHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCcccc
Confidence 36788899999999999996 4788999998864322 125788999999999 8999999999997632 2
Q ss_pred ceEEEEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCC
Q 004979 503 FTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWN 582 (721)
Q Consensus 503 ~~~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~ 582 (721)
...++||||+++|+|.+++.......+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||++.
T Consensus 100 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--ivH~dlkp~NIl~~~~~~~kl~Dfg~~~ 177 (326)
T 2x7f_A 100 DQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHK--VIHRDIKGQNVLLTENAEVKLVDFGVSA 177 (326)
T ss_dssp CEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCSGGGEEECTTCCEEECCCTTTC
T ss_pred ceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCcHHHEEEcCCCCEEEeeCcCce
Confidence 26799999999999999997655567999999999999999999999998 9999999999999999999999999876
Q ss_pred CCC---------CCCccccchhhcc-----cCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCcc
Q 004979 583 NTT---------AAKTGSAAMELLE-----TSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKD 648 (721)
Q Consensus 583 ~~~---------~~~~~~~apE~~~-----~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~ 648 (721)
... .++..|+|||.+. ...++.++|||||||++|||+||+.||.... ............. ..
T Consensus 178 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--~~~~~~~~~~~~~--~~ 253 (326)
T 2x7f_A 178 QLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMH--PMRALFLIPRNPA--PR 253 (326)
T ss_dssp -------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSC--HHHHHHHHHHSCC--CC
T ss_pred ecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCc--HHHHHHHhhcCcc--cc
Confidence 432 2456799999986 5678999999999999999999999996332 2222222222211 11
Q ss_pred ccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004979 649 IVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 688 (721)
Q Consensus 649 ~~d~~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 688 (721)
.. ...++.++.+++.+||+.||++||++.|+++
T Consensus 254 ~~-------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 254 LK-------SKKWSKKFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp CS-------CSCSCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred CC-------ccccCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 11 1223467889999999999999999999986
No 220
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=2.8e-37 Score=328.11 Aligned_cols=248 Identities=17% Similarity=0.317 Sum_probs=191.6
Q ss_pred hhhCcCCCCceeEEEEEEecCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEEEEE
Q 004979 430 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 509 (721)
Q Consensus 430 ~ii~~lg~G~~g~Vyk~~~~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~lV~ 509 (721)
++.+.+|+|+||.||+|+... .+++|++....... ...+.+.+|++++++++||||+++++++.+.+ ..++||
T Consensus 36 ~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~--~~~iv~ 108 (319)
T 2y4i_B 36 EIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNE---DQLKAFKREVMAYRQTRHENVVLFMGACMSPP--HLAIIT 108 (319)
T ss_dssp ECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCC---CCCCCCCTTGGGGTTCCCTTBCCCCEEEECSS--CEEEEC
T ss_pred EEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCH---HHHHHHHHHHHHHhcCCCCCEeEEEEEEecCC--ceEEEe
Confidence 677899999999999999764 48888876543211 11245788999999999999999999999876 679999
Q ss_pred ecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCC-----
Q 004979 510 EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT----- 584 (721)
Q Consensus 510 Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~----- 584 (721)
||+++|+|.+++.. ....+++..+..++.||+.||+|||+.+ |+||||||+|||++ ++.+||+|||+++..
T Consensus 109 e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~--i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~ 184 (319)
T 2y4i_B 109 SLCKGRTLYSVVRD-AKIVLDVNKTRQIAQEIVKGMGYLHAKG--ILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQA 184 (319)
T ss_dssp BCCCSEEHHHHTTS-SCCCCCSHHHHHHHHHHHHHHHHHHHTT--CCCCCCCSTTEEEC---CCEECCCSCCC-------
T ss_pred ecccCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC--ccccCCChhhEEEe-CCCEEEeecCCccccccccc
Confidence 99999999999863 3346899999999999999999999998 99999999999998 679999999986532
Q ss_pred ---------CCCCccccchhhccc---------CCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCC
Q 004979 585 ---------TAAKTGSAAMELLET---------SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPL 646 (721)
Q Consensus 585 ---------~~~~~~~~apE~~~~---------~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~ 646 (721)
..++..|+|||.+.. ..++.++|||||||++|||+||+.||... ...........+..+
T Consensus 185 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~--~~~~~~~~~~~~~~~- 261 (319)
T 2y4i_B 185 GRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQ--PAEAIIWQMGTGMKP- 261 (319)
T ss_dssp ---CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSC--CHHHHHHHHHTTCCC-
T ss_pred cccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCC--CHHHHHHHhccCCCC-
Confidence 123456899999864 45789999999999999999999999643 333333333332211
Q ss_pred ccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCCC
Q 004979 647 KDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPD 699 (721)
Q Consensus 647 ~~~~d~~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~ 699 (721)
.... ..++.++.+++.+||+.||++||++.|+++.|+++.+....
T Consensus 262 -~~~~-------~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~~~ 306 (319)
T 2y4i_B 262 -NLSQ-------IGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRNRR 306 (319)
T ss_dssp -CCCC-------SSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC------
T ss_pred -CCCc-------CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhhcc
Confidence 1111 12345688999999999999999999999999998876543
No 221
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=1.2e-36 Score=325.29 Aligned_cols=248 Identities=19% Similarity=0.273 Sum_probs=193.4
Q ss_pred hhhhCcCCCCceeEEEEEEe--cCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCc------cceEeEEEecC
Q 004979 429 SNIIGSFSDGTVGTVYKGTL--SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKN------FVNLIGYCEED 500 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~--~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~n------Iv~l~g~~~~~ 500 (721)
+++++.+|+|+||+||+|+. .++..||||++... ....+.+.+|++++.+++|+| |+++++++...
T Consensus 16 y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~------~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~ 89 (339)
T 1z57_A 16 YEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV------DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHH 89 (339)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS------HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEET
T ss_pred eEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC------CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccC
Confidence 47788999999999999986 36788999987532 223467888999998887665 99999999887
Q ss_pred CCceEEEEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCC-----------
Q 004979 501 EPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTE----------- 569 (721)
Q Consensus 501 ~~~~~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~----------- 569 (721)
+ ..++||||+ +++|.+++.......+++..+..++.|++.||+|||+++ |+||||||+|||++.
T Consensus 90 ~--~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~Dlkp~Nil~~~~~~~~~~~~~~ 164 (339)
T 1z57_A 90 G--HICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNK--LTHTDLKPENILFVQSDYTEAYNPKI 164 (339)
T ss_dssp T--EEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEESCCCEEEEEC---
T ss_pred C--cEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCC--CcCCCCCHHHEEEeccccccccCCcc
Confidence 7 779999999 899999997655567899999999999999999999998 999999999999987
Q ss_pred --------CCcEEEeccCCCCCC------CCCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCH-HH
Q 004979 570 --------DYAAKISDFSFWNNT------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSL-EN 634 (721)
Q Consensus 570 --------~~~~kL~DFGla~~~------~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~-~~ 634 (721)
++.+||+|||+++.. ..++..|+|||.+.+..++.++|||||||++|||+||+.||...+... ..
T Consensus 165 ~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~ 244 (339)
T 1z57_A 165 KRDERTLINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLA 244 (339)
T ss_dssp -CEEEEESCCCEEECCCSSCEETTSCCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHH
T ss_pred ccccccccCCCceEeeCcccccCccccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHH
Confidence 678999999987633 234567999999999999999999999999999999999997443211 11
Q ss_pred HHHHHhhcCCCCc--------cc---------------------cCC--ccccccHHHHHHHHHHHHHcccCCCCCCCCH
Q 004979 635 WASEYLKGEQPLK--------DI---------------------VDP--TLKSFQENVLEELLVVIKNCVHPDPKQRPSM 683 (721)
Q Consensus 635 ~~~~~~~~~~~~~--------~~---------------------~d~--~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~ 683 (721)
.+.... +..+.. .. ..+ ..........+++.+|+.+||+.||++|||+
T Consensus 245 ~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~ 323 (339)
T 1z57_A 245 MMERIL-GPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITL 323 (339)
T ss_dssp HHHHHH-CSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCH
T ss_pred HHHHHh-CCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCH
Confidence 111111 100000 00 000 0001123457789999999999999999999
Q ss_pred HHHHH
Q 004979 684 RGIAA 688 (721)
Q Consensus 684 ~evl~ 688 (721)
.|+++
T Consensus 324 ~ell~ 328 (339)
T 1z57_A 324 REALK 328 (339)
T ss_dssp HHHTT
T ss_pred HHHhc
Confidence 99975
No 222
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.1e-36 Score=332.75 Aligned_cols=252 Identities=18% Similarity=0.264 Sum_probs=189.3
Q ss_pred hhhhCcCCCCceeEEEEEEe-cCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCC------
Q 004979 429 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDE------ 501 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~-~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~------ 501 (721)
+++++.+|+|+||+||+|+. .++..||+|++..... ...+|+++|++++|||||++++++....
T Consensus 9 y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~---------~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~ 79 (383)
T 3eb0_A 9 YSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR---------YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKP 79 (383)
T ss_dssp EEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT---------SCCHHHHHHTTCCCTTBCCEEEEEEEC-------
T ss_pred EEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc---------hHHHHHHHHHHcCCCCccchhheeeecCcccccc
Confidence 47788999999999999985 5789999998864321 2347999999999999999999985432
Q ss_pred ------------------------------CceEEEEEecCCCCChhhhhhh--ccCCCCCHHHHHHHHHHHHHHHHHHh
Q 004979 502 ------------------------------PFTRMMVFEYSPNGSLFEHLHI--QEAEHLDWAMRLRIAMGMAYCLEHMH 549 (721)
Q Consensus 502 ------------------------------~~~~~lV~Ey~~~GsL~~~l~~--~~~~~l~~~~~~~ia~~ia~gL~yLH 549 (721)
....++||||++ |+|.+.+.. .....+++..+..++.||+.||+|||
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH 158 (383)
T 3eb0_A 80 PQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIH 158 (383)
T ss_dssp ------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 113789999998 588877753 24567999999999999999999999
Q ss_pred cCCCCeEeeCCCCCCeEeC-CCCcEEEeccCCCCCC--------CCCCccccchhhcccC-CCCCCccHHHHHHHHHHHH
Q 004979 550 QLTPPIAHRNLQSSSIYLT-EDYAAKISDFSFWNNT--------TAAKTGSAAMELLETS-AVDLESNVYSFGTILFEMI 619 (721)
Q Consensus 550 ~~~~~IvHrDLKp~NILl~-~~~~~kL~DFGla~~~--------~~~~~~~~apE~~~~~-~~s~ksDVwSfGvvL~Ell 619 (721)
+++ |+||||||+|||++ +++.+||+|||+++.. ..++..|+|||.+.+. .++.++||||+||++|||+
T Consensus 159 ~~g--i~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell 236 (383)
T 3eb0_A 159 SLG--ICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELI 236 (383)
T ss_dssp TTT--EECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHH
T ss_pred HCc--CccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHH
Confidence 998 99999999999998 6899999999998632 2234568999998764 5899999999999999999
Q ss_pred hCCCcccCCCCCHHHHHHHHhh--cCC----------CCccccCCcc------ccccHHHHHHHHHHHHHcccCCCCCCC
Q 004979 620 TGRISYSIENGSLENWASEYLK--GEQ----------PLKDIVDPTL------KSFQENVLEELLVVIKNCVHPDPKQRP 681 (721)
Q Consensus 620 tG~~P~~~~~~~~~~~~~~~~~--~~~----------~~~~~~d~~l------~~~~~~~~~~l~~li~~Cl~~dP~~RP 681 (721)
+|+.||.... ..+....+.. +.. ...+..-+.. ..++...+.++.+|+.+||+.||++||
T Consensus 237 ~g~~pf~~~~--~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ 314 (383)
T 3eb0_A 237 LGKPLFSGET--SIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRI 314 (383)
T ss_dssp HSSCSSCCSS--HHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSC
T ss_pred hCCCCCCCCC--hHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCC
Confidence 9999997432 2222222211 000 0000000110 012334567899999999999999999
Q ss_pred CHHHHHHH--HHHhh
Q 004979 682 SMRGIAAK--LKEIT 694 (721)
Q Consensus 682 s~~evl~~--L~~i~ 694 (721)
|+.|+++. ++++.
T Consensus 315 t~~e~l~hp~f~~~~ 329 (383)
T 3eb0_A 315 NPYEAMAHPFFDHLR 329 (383)
T ss_dssp CHHHHHTSGGGHHHH
T ss_pred CHHHHhcCHHHHHHH
Confidence 99999853 44443
No 223
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=1.7e-36 Score=335.33 Aligned_cols=252 Identities=18% Similarity=0.261 Sum_probs=188.2
Q ss_pred hhhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecC----CCc
Q 004979 429 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEED----EPF 503 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~----~~~ 503 (721)
+++++.||+|+||+||+|+.. +++.||||++.... ..+.+|+++|++++|||||++++++... +..
T Consensus 56 y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~---------~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~ 126 (420)
T 1j1b_A 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK---------RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEV 126 (420)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT---------TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEE
T ss_pred EEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc---------hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcce
Confidence 356778999999999999975 68999999885432 1234799999999999999999988542 222
Q ss_pred eEEEEEecCCCCChhhhhhh--ccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCC-CcEEEeccCC
Q 004979 504 TRMMVFEYSPNGSLFEHLHI--QEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTED-YAAKISDFSF 580 (721)
Q Consensus 504 ~~~lV~Ey~~~GsL~~~l~~--~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~-~~~kL~DFGl 580 (721)
..++||||+++ +|.+.+.. .....+++..+..++.||+.||+|||+.+ |+||||||+|||++.+ +.+||+|||+
T Consensus 127 ~~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~--ivHrDlkp~NILl~~~~~~~kl~DFG~ 203 (420)
T 1j1b_A 127 YLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGS 203 (420)
T ss_dssp EEEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTT--EECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred eEEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCChhhEEEeCCCCeEEeccchh
Confidence 46799999975 66666542 23467999999999999999999999988 9999999999999955 6789999999
Q ss_pred CCCC--------CCCCccccchhhcccC-CCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhc---------
Q 004979 581 WNNT--------TAAKTGSAAMELLETS-AVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKG--------- 642 (721)
Q Consensus 581 a~~~--------~~~~~~~~apE~~~~~-~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~--------- 642 (721)
++.. ..++..|+|||.+.+. .++.++|||||||++|||++|+.||.... ..+.+..++..
T Consensus 204 a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~--~~~~l~~i~~~lg~p~~~~~ 281 (420)
T 1j1b_A 204 AKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS--GVDQLVEIIKVLGTPTREQI 281 (420)
T ss_dssp CEECCTTCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHHHHHCSCCHHHH
T ss_pred hhhcccCCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHHHhCCCCHHHH
Confidence 8632 2245679999998654 79999999999999999999999997443 22222222110
Q ss_pred ---CCCCccccCCccc------cccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HHHhh
Q 004979 643 ---EQPLKDIVDPTLK------SFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK--LKEIT 694 (721)
Q Consensus 643 ---~~~~~~~~d~~l~------~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~--L~~i~ 694 (721)
...+.+..-+.+. .+....+.++.+|+.+||+.||++||++.|+++. ++++.
T Consensus 282 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~f~~~~ 344 (420)
T 1j1b_A 282 REMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 344 (420)
T ss_dssp HHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGGG
T ss_pred HhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCHhhcccc
Confidence 0001111111111 1123345789999999999999999999999863 44443
No 224
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=1.2e-36 Score=330.24 Aligned_cols=250 Identities=18% Similarity=0.203 Sum_probs=180.2
Q ss_pred hhhhCcCCCCceeEEEEEEe-cCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCC----Cc
Q 004979 429 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDE----PF 503 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~-~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~----~~ 503 (721)
+++++.+|+|+||.||+|+. .++..||||++..... .....+.+.+|++++++++||||+++++++.... ..
T Consensus 31 y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~---~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ---SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp EEEEEECC----CCEEEEEETTTTEEEEEEECSSTTS---SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred eEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCcccc---CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 46788999999999999985 5688999998864321 1234567899999999999999999999987542 12
Q ss_pred eEEEEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCC
Q 004979 504 TRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN 583 (721)
Q Consensus 504 ~~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~ 583 (721)
..++|+||+ +++|.+++.. ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 108 ~~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~g--ivH~Dlkp~NIll~~~~~~kL~DFG~a~~ 181 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVKC---QKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH 181 (367)
T ss_dssp CCEEEEECC-CEECC--------CCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTCCEEECC------
T ss_pred eEEEEeccc-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC--eeeCCCCHhhEEECCCCCEEEeecccccc
Confidence 469999999 7899988853 56999999999999999999999998 99999999999999999999999999864
Q ss_pred CC------CCCccccchhhccc-CCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcC-CCCcccc-----
Q 004979 584 TT------AAKTGSAAMELLET-SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGE-QPLKDIV----- 650 (721)
Q Consensus 584 ~~------~~~~~~~apE~~~~-~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~-~~~~~~~----- 650 (721)
.. .++..|+|||.+.+ ..++.++|||||||++|||+||+.||...+ ....+..+.... .+..+..
T Consensus 182 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~--~~~~l~~i~~~~g~p~~~~~~~~~~ 259 (367)
T 2fst_X 182 TADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD--HIDQLKLILRLVGTPGAELLKKISS 259 (367)
T ss_dssp ---------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHHHHHCSCCHHHHTTCCC
T ss_pred ccccCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHHHhCCCCHHHHHHhhh
Confidence 32 34567899999876 688999999999999999999999996433 222222221110 0100000
Q ss_pred --------------CCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004979 651 --------------DPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 689 (721)
Q Consensus 651 --------------d~~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 689 (721)
.............++.+|+.+||+.||++|||+.|+++.
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 260 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp HHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 000111112335678999999999999999999999864
No 225
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=3e-36 Score=319.79 Aligned_cols=247 Identities=16% Similarity=0.228 Sum_probs=185.4
Q ss_pred hhhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecC-------
Q 004979 429 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEED------- 500 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~------- 500 (721)
+++++.+|+|+||.||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++...
T Consensus 13 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 87 (320)
T 2i6l_A 13 YMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTD-----PQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDD 87 (320)
T ss_dssp EEEEEECC-----CEEEEEETTTTEEEEEEEEECCS-----HHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC-
T ss_pred eeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCC-----hHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccc
Confidence 467788999999999999976 48899999886432 23456789999999999999999999988532
Q ss_pred -----CCceEEEEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeC-CCCcEE
Q 004979 501 -----EPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLT-EDYAAK 574 (721)
Q Consensus 501 -----~~~~~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~-~~~~~k 574 (721)
+....++||||++ |+|.+++. ...+++..+..++.|++.||+|||+++ |+||||||+|||++ +++.+|
T Consensus 88 ~~~~~~~~~~~lv~e~~~-~~L~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~Nil~~~~~~~~k 161 (320)
T 2i6l_A 88 VGSLTELNSVYIVQEYME-TDLANVLE---QGPLLEEHARLFMYQLLRGLKYIHSAN--VLHRDLKPANLFINTEDLVLK 161 (320)
T ss_dssp ---CCSCSEEEEEEECCS-EEHHHHHT---TCCCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCSGGGEEEETTTTEEE
T ss_pred cccccccCceeEEeeccC-CCHHHHhh---cCCccHHHHHHHHHHHHHHHHHHHhCC--EecCCCCHHHEEEcCCCCeEE
Confidence 1126799999997 69999985 346899999999999999999999998 99999999999997 677999
Q ss_pred EeccCCCCCCCC------------CCccccchhhccc-CCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhh
Q 004979 575 ISDFSFWNNTTA------------AKTGSAAMELLET-SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLK 641 (721)
Q Consensus 575 L~DFGla~~~~~------------~~~~~~apE~~~~-~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~ 641 (721)
|+|||+++.... ++..|+|||.+.. ..++.++|||||||++|||+||+.||.... ..+....+..
T Consensus 162 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~--~~~~~~~~~~ 239 (320)
T 2i6l_A 162 IGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAH--ELEQMQLILE 239 (320)
T ss_dssp ECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHHH
T ss_pred EccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCC--HHHHHHHHHH
Confidence 999999864321 2446899998755 778999999999999999999999996432 2222222222
Q ss_pred cCCCCcc-----------------ccCC--ccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004979 642 GEQPLKD-----------------IVDP--TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 688 (721)
Q Consensus 642 ~~~~~~~-----------------~~d~--~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 688 (721)
....... ...+ ........++.++.+++.+||+.||++||++.|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (320)
T 2i6l_A 240 SIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS 305 (320)
T ss_dssp HSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred hcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence 1111000 0000 001112335678999999999999999999999986
No 226
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=1.8e-36 Score=352.54 Aligned_cols=245 Identities=20% Similarity=0.331 Sum_probs=199.8
Q ss_pred hhhCcCCCCceeEEEEEEecC----CcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceE
Q 004979 430 NIIGSFSDGTVGTVYKGTLSS----GVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTR 505 (721)
Q Consensus 430 ~ii~~lg~G~~g~Vyk~~~~~----~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~ 505 (721)
++.+.+|+|+||+||+|++.. +..||+|+..... .....+.|.+|+.++++++|||||++++++.+. ..
T Consensus 393 ~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~---~~ 465 (656)
T 2j0j_A 393 ELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCT----SDSVREKFLQEALTMRQFDHPHIVKLIGVITEN---PV 465 (656)
T ss_dssp EEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTT----CHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS---SC
T ss_pred EEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccC----CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecC---ce
Confidence 667789999999999998743 4568888765322 233457899999999999999999999998543 45
Q ss_pred EEEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCCC
Q 004979 506 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT 585 (721)
Q Consensus 506 ~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~~ 585 (721)
++||||+++|+|.+++.. ....+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 466 ~lv~E~~~~g~L~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~g--ivHrDikp~NILl~~~~~vkL~DFG~a~~~~ 542 (656)
T 2j0j_A 466 WIIMELCTLGELRSFLQV-RKFSLDLASLILYAYQLSTALAYLESKR--FVHRDIAARNVLVSSNDCVKLGDFGLSRYME 542 (656)
T ss_dssp EEEEECCTTCBHHHHHHH-TTTTCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEEEETTEEEECCCCCCCSCC
T ss_pred EEEEEcCCCCcHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHhCC--ccccccchHhEEEeCCCCEEEEecCCCeecC
Confidence 899999999999999964 3346899999999999999999999998 9999999999999999999999999987542
Q ss_pred C----------CCccccchhhcccCCCCCCccHHHHHHHHHHHHh-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCcc
Q 004979 586 A----------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTL 654 (721)
Q Consensus 586 ~----------~~~~~~apE~~~~~~~s~ksDVwSfGvvL~Ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 654 (721)
. ++..|+|||.+....++.++|||||||++|||++ |+.||... ...+....+..+...
T Consensus 543 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~--~~~~~~~~i~~~~~~--------- 611 (656)
T 2j0j_A 543 DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV--KNNDVIGRIENGERL--------- 611 (656)
T ss_dssp C----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC--CHHHHHHHHHHTCCC---------
T ss_pred CCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCC--CHHHHHHHHHcCCCC---------
Confidence 2 2246999999998999999999999999999997 99999643 333333333333211
Q ss_pred ccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhc
Q 004979 655 KSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAM 696 (721)
Q Consensus 655 ~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~L~~i~~~ 696 (721)
..+..++.++.+++.+||+.||++||++.||++.|+++.+.
T Consensus 612 -~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~ 652 (656)
T 2j0j_A 612 -PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE 652 (656)
T ss_dssp -CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -CCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHH
Confidence 12234557889999999999999999999999999988653
No 227
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=1.3e-35 Score=312.16 Aligned_cols=239 Identities=23% Similarity=0.328 Sum_probs=187.7
Q ss_pred hhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCC-------
Q 004979 430 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDE------- 501 (721)
Q Consensus 430 ~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~------- 501 (721)
++++.+|+|+||+||+|+.. +++.||+|++... ....+.+.+|++++++++||||+++++++.+..
T Consensus 9 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~------~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 82 (303)
T 1zy4_A 9 EEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT------EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMT 82 (303)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE------HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC---
T ss_pred hhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc------HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhc
Confidence 67788999999999999964 7889999988532 233467999999999999999999999886531
Q ss_pred ----CceEEEEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEec
Q 004979 502 ----PFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISD 577 (721)
Q Consensus 502 ----~~~~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~D 577 (721)
....++||||+++|+|.+++.. ....+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|
T Consensus 83 ~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~--i~H~dlkp~Nil~~~~~~~kl~d 159 (303)
T 1zy4_A 83 AVKKKSTLFIQMEYCENGTLYDLIHS-ENLNQQRDEYWRLFRQILEALSYIHSQG--IIHRDLKPMNIFIDESRNVKIGD 159 (303)
T ss_dssp ---CEEEEEEEEECCCSCBHHHHHHH-SCGGGCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECTTSCEEECC
T ss_pred ccccCCceEEEEecCCCCCHHHhhhc-cccccchHHHHHHHHHHHHHHHHHHhCC--eecccCCHHhEEEcCCCCEEEee
Confidence 2357999999999999999964 3345788899999999999999999998 99999999999999999999999
Q ss_pred cCCCCCCC-----------------------CCCccccchhhcccC-CCCCCccHHHHHHHHHHHHhCCCcccCCCCCHH
Q 004979 578 FSFWNNTT-----------------------AAKTGSAAMELLETS-AVDLESNVYSFGTILFEMITGRISYSIENGSLE 633 (721)
Q Consensus 578 FGla~~~~-----------------------~~~~~~~apE~~~~~-~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~ 633 (721)
||+++... .++..|+|||.+.+. .++.++|||||||++|||++ ||... .+..
T Consensus 160 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~-~~~~ 235 (303)
T 1zy4_A 160 FGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTG-MERV 235 (303)
T ss_dssp CCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSH-HHHH
T ss_pred CcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCc-hhHH
Confidence 99876432 134568999998754 78999999999999999998 44311 1112
Q ss_pred HHHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004979 634 NWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 688 (721)
Q Consensus 634 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 688 (721)
.............. ..+....+..+.+++.+||+.||++|||+.|+++
T Consensus 236 ~~~~~~~~~~~~~~-------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 283 (303)
T 1zy4_A 236 NILKKLRSVSIEFP-------PDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN 283 (303)
T ss_dssp HHHHHHHSTTCCCC-------TTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHhccccccccC-------ccccccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence 22222222111111 1123345567889999999999999999999986
No 228
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=3.8e-36 Score=326.11 Aligned_cols=250 Identities=18% Similarity=0.225 Sum_probs=191.1
Q ss_pred hhhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCC---Cce
Q 004979 429 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDE---PFT 504 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~---~~~ 504 (721)
+++++.+|+|+||+||+|+.. ++..||+|++.... .....+.+.+|++++.+++||||+++++++.... ...
T Consensus 29 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 104 (364)
T 3qyz_A 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE----HQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD 104 (364)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTT----CHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCC
T ss_pred EEEEEEeecCCCeEEEEEEECCCCeEEEEEEecccc----CcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccce
Confidence 467889999999999999865 67889999886422 1334467899999999999999999999997543 125
Q ss_pred EEEEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCC
Q 004979 505 RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT 584 (721)
Q Consensus 505 ~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~ 584 (721)
.++||||+. |+|.+++.. ..+++..+..|+.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 105 ~~iv~e~~~-~~L~~~l~~---~~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~ 178 (364)
T 3qyz_A 105 VYIVQDLME-TDLYKLLKT---QHLSNDHICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVA 178 (364)
T ss_dssp EEEEEECCS-EEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEEcccC-cCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCChHhEEECCCCCEEEEeCcceEec
Confidence 799999997 599998853 45899999999999999999999998 999999999999999999999999987532
Q ss_pred C------------CCCccccchhhcc-cCCCCCCccHHHHHHHHHHHHhCCCcccCCCCC-HHHHHHHHhhcCCCCcc--
Q 004979 585 T------------AAKTGSAAMELLE-TSAVDLESNVYSFGTILFEMITGRISYSIENGS-LENWASEYLKGEQPLKD-- 648 (721)
Q Consensus 585 ~------------~~~~~~~apE~~~-~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~-~~~~~~~~~~~~~~~~~-- 648 (721)
. .++..|+|||.+. ...++.++|||||||++|||+||+.||...... ....+.... +......
T Consensus 179 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~-~~~~~~~~~ 257 (364)
T 3qyz_A 179 DPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGIL-GSPSQEDLN 257 (364)
T ss_dssp CGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHH-CSCCHHHHH
T ss_pred CCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHh-CCCCHHHHH
Confidence 2 3456789999865 455899999999999999999999999644321 111111111 1000000
Q ss_pred -------------ccCC---ccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004979 649 -------------IVDP---TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 689 (721)
Q Consensus 649 -------------~~d~---~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 689 (721)
.... .........+.++.+|+.+||+.||++|||+.|+++.
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 314 (364)
T 3qyz_A 258 CIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314 (364)
T ss_dssp TCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0000 0011123345678999999999999999999999873
No 229
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=4.6e-36 Score=326.32 Aligned_cols=249 Identities=16% Similarity=0.225 Sum_probs=191.8
Q ss_pred hhhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCc----
Q 004979 429 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPF---- 503 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~---- 503 (721)
+.+.+.+|+|+||+||+|+.. ++..||||++..... .....+.+.+|+.++++++||||+++++++...+..
T Consensus 44 y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 44 YVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQ---SEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTS---SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred EEEEeEEecCCCeEEEEEEECCCCCEEEEEEeccccc---chhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 356778999999999999864 688999998864322 233457889999999999999999999999865521
Q ss_pred eEEEEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCC
Q 004979 504 TRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN 583 (721)
Q Consensus 504 ~~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~ 583 (721)
..++||||+. |+|.+++. ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 121 ~~~lv~e~~~-~~l~~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dikp~NIll~~~~~~kL~Dfg~a~~ 193 (371)
T 4exu_A 121 DFYLVMPFMQ-TDLQKIMG----MEFSEEKIQYLVYQMLKGLKYIHSAG--VVHRDLKPGNLAVNEDCELKILDFGLARH 193 (371)
T ss_dssp CCEEEEECCC-EEHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECTTCCEEECSTTCC--
T ss_pred eEEEEEcccc-ccHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHHCC--CcCCCcCHHHeEECCCCCEEEEecCcccc
Confidence 2389999997 68888763 34899999999999999999999998 99999999999999999999999999864
Q ss_pred CC------CCCccccchhhccc-CCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCC-CCcccc-----
Q 004979 584 TT------AAKTGSAAMELLET-SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQ-PLKDIV----- 650 (721)
Q Consensus 584 ~~------~~~~~~~apE~~~~-~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~-~~~~~~----- 650 (721)
.. .++..|+|||.+.+ ..++.++|||||||++|||+||+.||...+ ..+....+..... +..+..
T Consensus 194 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~ 271 (371)
T 4exu_A 194 ADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKD--YLDQLTQILKVTGVPGTEFVQKLND 271 (371)
T ss_dssp ------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHHHHHCCCCHHHHTTCSC
T ss_pred cccCcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCC--hHHHHHHHHHHhCCCcHHHHHHhhh
Confidence 32 34567999999876 789999999999999999999999996432 2222222221100 000000
Q ss_pred --------------CCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004979 651 --------------DPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 689 (721)
Q Consensus 651 --------------d~~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 689 (721)
...........+.++.+|+.+||+.||++|||+.|+++.
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 272 KAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp HHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 001111223346789999999999999999999999874
No 230
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=2.6e-35 Score=308.39 Aligned_cols=243 Identities=21% Similarity=0.271 Sum_probs=194.9
Q ss_pred hhhhhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceE
Q 004979 427 DFSNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTR 505 (721)
Q Consensus 427 ~~~~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~ 505 (721)
+-+++++.+|+|+||+||+|+.. +++.|++|++...... ....+.+.+|++++++++||||+++++++.+.+ ..
T Consensus 22 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~ 96 (287)
T 2wei_A 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAK---NKDTSTILREVELLKKLDHPNIMKLFEILEDSS--SF 96 (287)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBS---SSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EE
T ss_pred hcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccc---hHHHHHHHHHHHHHHhccCCCccEEEEEEeCCC--eE
Confidence 33578899999999999999975 6889999988654322 122467899999999999999999999998876 67
Q ss_pred EEEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCC---CcEEEeccCCCC
Q 004979 506 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTED---YAAKISDFSFWN 582 (721)
Q Consensus 506 ~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~---~~~kL~DFGla~ 582 (721)
++||||+++++|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.+ +.+||+|||++.
T Consensus 97 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~~--i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~ 172 (287)
T 2wei_A 97 YIVGELYTGGELFDEIIKR--KRFSEHDAARIIKQVFSGITYMHKHN--IVHRDLKPENILLESKEKDCDIKIIDFGLST 172 (287)
T ss_dssp EEEECCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEESCSSTTCCEEECSTTGGG
T ss_pred EEEEEccCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC--eeccCCChhhEEEecCCCcccEEEeccCcce
Confidence 9999999999999988643 46899999999999999999999998 9999999999999754 479999999876
Q ss_pred CCCC--------CCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcc
Q 004979 583 NTTA--------AKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTL 654 (721)
Q Consensus 583 ~~~~--------~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 654 (721)
.... ++..|+|||.+.+ .++.++||||||+++|||+||+.||... +..+.......+..... .+
T Consensus 173 ~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~--~~~~~~~~~~~~~~~~~---~~-- 244 (287)
T 2wei_A 173 CFQQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGK--NEYDILKRVETGKYAFD---LP-- 244 (287)
T ss_dssp TBCCCSSCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHCCCCCC---SG--
T ss_pred eecCCCccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCC--CHHHHHHHHHcCCCCCC---ch--
Confidence 4332 2346899998865 4899999999999999999999999643 33344444433322111 00
Q ss_pred ccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004979 655 KSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 688 (721)
Q Consensus 655 ~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 688 (721)
....++.++.+++.+||+.||++|||+.|+++
T Consensus 245 --~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 245 --QWRTISDDAKDLIRKMLTFHPSLRITATQCLE 276 (287)
T ss_dssp --GGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred --hhhhcCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence 11234567899999999999999999999987
No 231
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=4e-36 Score=329.44 Aligned_cols=254 Identities=17% Similarity=0.234 Sum_probs=188.6
Q ss_pred hhhhCcCCCCceeEEEEEEecCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCC----Cce
Q 004979 429 SNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDE----PFT 504 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~----~~~ 504 (721)
|.+++.+|+|+||+||+|+...+..+|+|++..... ...+|+++|++++|||||++++++...+ ...
T Consensus 42 Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~---------~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~ 112 (394)
T 4e7w_A 42 YTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR---------FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVF 112 (394)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT---------SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEE
T ss_pred EEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc---------hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceE
Confidence 467788999999999999988777899998754321 1236999999999999999999986533 123
Q ss_pred EEEEEecCCCCChhhhhhh-ccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeC-CCCcEEEeccCCCC
Q 004979 505 RMMVFEYSPNGSLFEHLHI-QEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLT-EDYAAKISDFSFWN 582 (721)
Q Consensus 505 ~~lV~Ey~~~GsL~~~l~~-~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~-~~~~~kL~DFGla~ 582 (721)
.++||||++++.+....+. .....+++..+..++.||+.||+|||+.+ |+||||||+|||++ .++.+||+|||+++
T Consensus 113 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~--ivHrDlkp~Nill~~~~~~~kL~DFG~a~ 190 (394)
T 4e7w_A 113 LNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIG--ICHRDIKPQNLLLDPPSGVLKLIDFGSAK 190 (394)
T ss_dssp EEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred EEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCC--ccCCCCCHHHEEEcCCCCcEEEeeCCCcc
Confidence 6899999987544333221 23467999999999999999999999998 99999999999999 79999999999986
Q ss_pred CC--------CCCCccccchhhcccC-CCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhc--CC-------
Q 004979 583 NT--------TAAKTGSAAMELLETS-AVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKG--EQ------- 644 (721)
Q Consensus 583 ~~--------~~~~~~~~apE~~~~~-~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~--~~------- 644 (721)
.. ..++..|+|||.+.+. .++.++|||||||++|||++|+.||...+ ..+....+... ..
T Consensus 191 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~--~~~~l~~i~~~~g~p~~~~~~~ 268 (394)
T 4e7w_A 191 ILIAGEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGES--GIDQLVEIIKVLGTPSREQIKT 268 (394)
T ss_dssp ECCTTCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHHHHHCCCCHHHHHH
T ss_pred cccCCCCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHHHhCCCCHHHHHh
Confidence 43 2235569999998654 58999999999999999999999997443 22222221110 00
Q ss_pred --------CCccccCCcc-ccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HHHhhh
Q 004979 645 --------PLKDIVDPTL-KSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK--LKEITA 695 (721)
Q Consensus 645 --------~~~~~~d~~l-~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~--L~~i~~ 695 (721)
.+..+..... ..+....+.++.+|+.+||+.||++|||+.|+++. ++++..
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~ 330 (394)
T 4e7w_A 269 MNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDELRT 330 (394)
T ss_dssp HCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTTTS
T ss_pred hChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhhcc
Confidence 0000000000 01222356789999999999999999999999874 444433
No 232
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=6.6e-36 Score=317.01 Aligned_cols=240 Identities=21% Similarity=0.302 Sum_probs=191.1
Q ss_pred hhhhCcCCCCceeEEEEEEecCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCC--CCccceEeEEEecCCCceEE
Q 004979 429 SNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN--HKNFVNLIGYCEEDEPFTRM 506 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~--H~nIv~l~g~~~~~~~~~~~ 506 (721)
+++++.+|+|+||.||+|+..++..||||++..... .....+.+.+|++++.+++ |+||+++++++...+ ..+
T Consensus 30 y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~---~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~--~~~ 104 (313)
T 3cek_A 30 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEA---DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ--YIY 104 (313)
T ss_dssp EEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSC---CHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSS--EEE
T ss_pred EEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccc---cccchHHHHHHHHHHHhccccCCceEEEEEEeecCC--EEE
Confidence 367788999999999999988899999999865432 2334567999999999997 599999999998876 679
Q ss_pred EEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCCC-
Q 004979 507 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT- 585 (721)
Q Consensus 507 lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~~- 585 (721)
+||| +.+|+|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+|||+++ +.+||+|||+++...
T Consensus 105 lv~e-~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~ 178 (313)
T 3cek_A 105 MVME-CGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIHQHG--IVHSDLKPANFLIVD-GMLKLIDFGIANQMQP 178 (313)
T ss_dssp EEEC-CCSEEHHHHHHH--CSSCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEEET-TEEEECCCSSSCC---
T ss_pred EEEe-cCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC--ceecCCCcccEEEEC-CeEEEeeccccccccC
Confidence 9999 568899999864 356899999999999999999999998 999999999999975 899999999986432
Q ss_pred ----------CCCccccchhhccc-----------CCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCC
Q 004979 586 ----------AAKTGSAAMELLET-----------SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQ 644 (721)
Q Consensus 586 ----------~~~~~~~apE~~~~-----------~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~ 644 (721)
.++..|+|||.+.. ..++.++|||||||++|||+||+.||....... ...........
T Consensus 179 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-~~~~~~~~~~~ 257 (313)
T 3cek_A 179 DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI-SKLHAIIDPNH 257 (313)
T ss_dssp -----------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHH-HHHHHHHCTTS
T ss_pred ccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHH-HHHHHHHhccc
Confidence 24567899999865 478899999999999999999999996433222 22222222111
Q ss_pred CCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004979 645 PLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 689 (721)
Q Consensus 645 ~~~~~~d~~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 689 (721)
.. .++...+.++.+++.+||+.||++||++.|+++.
T Consensus 258 ~~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 293 (313)
T 3cek_A 258 EI---------EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 293 (313)
T ss_dssp CC---------CCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cc---------CCcccchHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 10 1112234678899999999999999999999863
No 233
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=1.2e-35 Score=324.33 Aligned_cols=191 Identities=24% Similarity=0.226 Sum_probs=160.5
Q ss_pred hhhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCC-CC-----ccceEeEEEecCC
Q 004979 429 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN-HK-----NFVNLIGYCEEDE 501 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~-H~-----nIv~l~g~~~~~~ 501 (721)
+++++.||+|+||+||+|+.. +++.||||++... .....++..|++++..++ |+ +|+++++++...+
T Consensus 56 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~------~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~ 129 (382)
T 2vx3_A 56 YEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK------KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRN 129 (382)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS------HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETT
T ss_pred EEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc------HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCC
Confidence 367788999999999999865 6788999988632 223456778888888774 55 4999999998877
Q ss_pred CceEEEEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeC--CCCcEEEeccC
Q 004979 502 PFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLT--EDYAAKISDFS 579 (721)
Q Consensus 502 ~~~~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~--~~~~~kL~DFG 579 (721)
..++||||+. |+|.+++.......+++..+..++.|++.||+|||....+|+||||||+|||++ .++.+||+|||
T Consensus 130 --~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG 206 (382)
T 2vx3_A 130 --HLCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFG 206 (382)
T ss_dssp --EEEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESSTTSCCEEECCCT
T ss_pred --ceEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecCCCCcEEEEecc
Confidence 7899999995 599999976555679999999999999999999996434599999999999994 57889999999
Q ss_pred CCCCC------CCCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCC
Q 004979 580 FWNNT------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIE 628 (721)
Q Consensus 580 la~~~------~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~ 628 (721)
+++.. ..++..|+|||.+.+..++.++|||||||++|||+||+.||...
T Consensus 207 ~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~ 261 (382)
T 2vx3_A 207 SSCQLGQRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA 261 (382)
T ss_dssp TCEETTCCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred CceecccccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 98543 23456799999999999999999999999999999999999743
No 234
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=5e-36 Score=314.11 Aligned_cols=232 Identities=12% Similarity=0.112 Sum_probs=183.2
Q ss_pred hhhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEEE
Q 004979 429 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 507 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~l 507 (721)
|++++.+|+|+||.||+|+.. +++.||||++....... ....+.|.+|++++.+++||||+++++++.+.+ ..|+
T Consensus 33 y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~--~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~--~~~l 108 (286)
T 3uqc_A 33 YRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLP--DDVLQETLSRTLRLSRIDKPGVARVLDVVHTRA--GGLV 108 (286)
T ss_dssp EEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSC--HHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT--EEEE
T ss_pred EEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccC--HHHHHHHHHHHHHHhcCCCCCcceeeEEEEECC--cEEE
Confidence 467789999999999999975 48899999987543222 334578999999999999999999999998877 6799
Q ss_pred EEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCCCCC
Q 004979 508 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAA 587 (721)
Q Consensus 508 V~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~~~~ 587 (721)
||||+++++|.+++.. ........+|+.|++.||+|||+++ |+||||||+|||+++++.+||+++|..
T Consensus 109 v~e~~~g~~L~~~l~~----~~~~~~~~~i~~ql~~aL~~lH~~g--ivH~Dikp~NIll~~~g~~kl~~~~~~------ 176 (286)
T 3uqc_A 109 VAEWIRGGSLQEVADT----SPSPVGAIRAMQSLAAAADAAHRAG--VALSIDHPSRVRVSIDGDVVLAYPATM------ 176 (286)
T ss_dssp EEECCCEEEHHHHHTT----CCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCSGGGEEEETTSCEEECSCCCC------
T ss_pred EEEecCCCCHHHHHhc----CCChHHHHHHHHHHHHHHHHHHHCC--CccCCCCcccEEEcCCCCEEEEecccc------
Confidence 9999999999999852 2355578899999999999999998 999999999999999999999976642
Q ss_pred CccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcc---ccccHHHHHH
Q 004979 588 KTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTL---KSFQENVLEE 664 (721)
Q Consensus 588 ~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l---~~~~~~~~~~ 664 (721)
..++.++|||||||++|||+||+.||...+.... + ........... ......++.+
T Consensus 177 ------------~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~------~---~~~~~~~~~~~~~~~~~~~~~~~~ 235 (286)
T 3uqc_A 177 ------------PDANPQDDIRGIGASLYALLVNRWPLPEAGVRSG------L---APAERDTAGQPIEPADIDRDIPFQ 235 (286)
T ss_dssp ------------TTCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCC------S---EECCBCTTSCBCCHHHHCTTSCHH
T ss_pred ------------CCCCchhHHHHHHHHHHHHHHCCCCCCcCCcchh------h---HHHHHHhccCCCChhhcccCCCHH
Confidence 2478899999999999999999999974332100 0 00001111111 1122345678
Q ss_pred HHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCC
Q 004979 665 LLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEP 698 (721)
Q Consensus 665 l~~li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 698 (721)
+.+++.+||+.||++| |+.|+++.|+++.....
T Consensus 236 l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~~~ 268 (286)
T 3uqc_A 236 ISAVAARSVQGDGGIR-SASTLLNLMQQATAVAD 268 (286)
T ss_dssp HHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC---
T ss_pred HHHHHHHHcccCCccC-CHHHHHHHHHHHhccCC
Confidence 9999999999999999 99999999999877544
No 235
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=6.4e-36 Score=322.03 Aligned_cols=248 Identities=19% Similarity=0.263 Sum_probs=190.5
Q ss_pred hhhhCcCCCCceeEEEEEEec-CC-cEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCc------cceEeEEEecC
Q 004979 429 SNIIGSFSDGTVGTVYKGTLS-SG-VEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKN------FVNLIGYCEED 500 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~~-~~-~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~n------Iv~l~g~~~~~ 500 (721)
+++++.+|+|+||+||+|+.. ++ ..||+|++... ....+.+.+|++++++++|++ ++.+++++...
T Consensus 21 y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~------~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 94 (355)
T 2eu9_A 21 YEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV------GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFH 94 (355)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC------HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEET
T ss_pred EEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc------ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeC
Confidence 477889999999999999964 34 68999987532 223467888999999987766 89999999887
Q ss_pred CCceEEEEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEe-------------
Q 004979 501 EPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYL------------- 567 (721)
Q Consensus 501 ~~~~~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl------------- 567 (721)
+ ..++||||+ +|+|.+++.......+++..+..|+.||+.||+|||+++ |+||||||+|||+
T Consensus 95 ~--~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~--ivH~Dlkp~NIll~~~~~~~~~~~~~ 169 (355)
T 2eu9_A 95 G--HMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQ--LTHTDLKPENILFVNSEFETLYNEHK 169 (355)
T ss_dssp T--EEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTT--EECCCCCGGGEEESCCCEEEEECCC-
T ss_pred C--eEEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEEecccccccccccc
Confidence 7 779999999 778888876555567999999999999999999999988 9999999999999
Q ss_pred ------CCCCcEEEeccCCCCCC------CCCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCH-HH
Q 004979 568 ------TEDYAAKISDFSFWNNT------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSL-EN 634 (721)
Q Consensus 568 ------~~~~~~kL~DFGla~~~------~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~-~~ 634 (721)
+.++.+||+|||+++.. ..++..|+|||.+.+..++.++|||||||++|||+||+.||....... ..
T Consensus 170 ~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~ 249 (355)
T 2eu9_A 170 SCEEKSVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLV 249 (355)
T ss_dssp CCCEEEESCCCEEECCCTTCEETTSCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH
T ss_pred cccccccCCCcEEEeecCccccccccccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 56789999999998632 234567999999999999999999999999999999999997433211 11
Q ss_pred HHHHHhhcCCCCc--------cc-cC--------------------C--ccccccHHHHHHHHHHHHHcccCCCCCCCCH
Q 004979 635 WASEYLKGEQPLK--------DI-VD--------------------P--TLKSFQENVLEELLVVIKNCVHPDPKQRPSM 683 (721)
Q Consensus 635 ~~~~~~~~~~~~~--------~~-~d--------------------~--~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~ 683 (721)
.+.... +..+.. .. .. + ...........++.+|+.+||+.||++|||+
T Consensus 250 ~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~ 328 (355)
T 2eu9_A 250 MMEKIL-GPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITL 328 (355)
T ss_dssp HHHHHH-CCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCH
T ss_pred HHHHHc-CCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCH
Confidence 111111 110000 00 00 0 0000112345689999999999999999999
Q ss_pred HHHHH
Q 004979 684 RGIAA 688 (721)
Q Consensus 684 ~evl~ 688 (721)
.|+++
T Consensus 329 ~e~l~ 333 (355)
T 2eu9_A 329 AEALL 333 (355)
T ss_dssp HHHTT
T ss_pred HHHhc
Confidence 99975
No 236
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=1.2e-35 Score=320.58 Aligned_cols=249 Identities=16% Similarity=0.223 Sum_probs=192.9
Q ss_pred hhhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCc----
Q 004979 429 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPF---- 503 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~---- 503 (721)
+.+.+.+|+|+||.||+|+.. ++..||||++..... .....+.+.+|+.++++++||||+++++++...+..
T Consensus 26 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 102 (353)
T 3coi_A 26 YVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQ---SEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 102 (353)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTS---SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred EEEeeeEecCCCeEEEEEEECCCCCEEEEEEeccccc---chHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence 356678899999999999964 688999998864321 233456789999999999999999999999865421
Q ss_pred eEEEEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCC
Q 004979 504 TRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN 583 (721)
Q Consensus 504 ~~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~ 583 (721)
..++||||+. |+|.+++. ..+++..+..++.||+.||+|||+++ |+||||||+|||+++++.+||+|||+++.
T Consensus 103 ~~~lv~e~~~-~~l~~~~~----~~~~~~~~~~i~~qi~~al~~LH~~~--ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~ 175 (353)
T 3coi_A 103 DFYLVMPFMQ-TDLQKIMG----LKFSEEKIQYLVYQMLKGLKYIHSAG--VVHRDLKPGNLAVNEDCELKILDFGLARH 175 (353)
T ss_dssp CCEEEEECCS-EEGGGTTT----SCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSSCCGGGEEECTTCCEEECSTTCTTC
T ss_pred eEEEEecccc-CCHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEeECCCCcEEEeecccccC
Confidence 3489999997 68888774 34899999999999999999999998 99999999999999999999999999864
Q ss_pred CC------CCCccccchhhccc-CCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCC-C----------
Q 004979 584 TT------AAKTGSAAMELLET-SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQ-P---------- 645 (721)
Q Consensus 584 ~~------~~~~~~~apE~~~~-~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~-~---------- 645 (721)
.. .++..|+|||.+.+ ..++.++|||||||++|||+||+.||...+ ..+....+..... +
T Consensus 176 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~ 253 (353)
T 3coi_A 176 ADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKD--YLDQLTQILKVTGVPGTEFVQKLND 253 (353)
T ss_dssp --------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSC--HHHHHHHHHHHHCBCCHHHHTTCSC
T ss_pred CCCCccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHHHhCCCCHHHHHHHhh
Confidence 32 34567999999876 688999999999999999999999996433 2222222211100 0
Q ss_pred ---------CccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004979 646 ---------LKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 689 (721)
Q Consensus 646 ---------~~~~~d~~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 689 (721)
+...............+.++.+++.+||+.||++|||+.|+++.
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 306 (353)
T 3coi_A 254 KAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 306 (353)
T ss_dssp HHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 00000111112223456789999999999999999999999863
No 237
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=6.6e-36 Score=323.17 Aligned_cols=263 Identities=17% Similarity=0.236 Sum_probs=182.9
Q ss_pred HHHHHhhhhhhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEec
Q 004979 421 LEAACEDFSNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEE 499 (721)
Q Consensus 421 l~~~~~~~~~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~ 499 (721)
.....++| ++.+.+|+|+||+||+|+.. ++..||||++...... ...+.+|++.+..++||||+++++++..
T Consensus 18 ~~~~~~~y-~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~------~~~~~~~~~~l~~l~h~niv~~~~~~~~ 90 (360)
T 3e3p_A 18 SRKEMDRF-QVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRF------RNRELQIMQDLAVLHHPNIVQLQSYFYT 90 (360)
T ss_dssp HHHHHTTE-EEC----------CEEEEETTTCCEEEEEEEECCTTC------CCHHHHHHHHHHHHCCTTBCCEEEEEEE
T ss_pred chhhccce-EEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccc------cHHHHHHHHHHHhcCCCCcccHHHhhhc
Confidence 33444444 77889999999999999974 6889999988543221 1356778888999999999999999865
Q ss_pred CCC-----ceEEEEEecCCCCChhhhhhh--ccCCCCCHHHHHHHHHHHHHHHHHHh--cCCCCeEeeCCCCCCeEeCC-
Q 004979 500 DEP-----FTRMMVFEYSPNGSLFEHLHI--QEAEHLDWAMRLRIAMGMAYCLEHMH--QLTPPIAHRNLQSSSIYLTE- 569 (721)
Q Consensus 500 ~~~-----~~~~lV~Ey~~~GsL~~~l~~--~~~~~l~~~~~~~ia~~ia~gL~yLH--~~~~~IvHrDLKp~NILl~~- 569 (721)
.+. ...++||||+++ +|...+.. .....+++..+..++.|++.||+||| +++ |+||||||+|||++.
T Consensus 91 ~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~--ivH~Dlkp~NIll~~~ 167 (360)
T 3e3p_A 91 LGERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVN--VCHRDIKPHNVLVNEA 167 (360)
T ss_dssp ECSSCTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTC--CBCSCCCGGGEEEETT
T ss_pred cccccccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCC--eecCcCCHHHEEEeCC
Confidence 321 136899999976 55544432 24567899999999999999999999 666 999999999999996
Q ss_pred CCcEEEeccCCCCCCC--------CCCccccchhhcccC-CCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHh
Q 004979 570 DYAAKISDFSFWNNTT--------AAKTGSAAMELLETS-AVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYL 640 (721)
Q Consensus 570 ~~~~kL~DFGla~~~~--------~~~~~~~apE~~~~~-~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~ 640 (721)
++.+||+|||+++... .++..|+|||.+.+. .++.++|||||||++|||+||+.||.... .......+.
T Consensus 168 ~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~--~~~~~~~~~ 245 (360)
T 3e3p_A 168 DGTLKLCDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDN--SAGQLHEIV 245 (360)
T ss_dssp TTEEEECCCTTCBCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHH
T ss_pred CCcEEEeeCCCceecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCC--hHHHHHHHH
Confidence 8999999999986432 245579999998654 48999999999999999999999996433 222222222
Q ss_pred hcC-CCC-------------ccccCCc-------cccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HHHhhh
Q 004979 641 KGE-QPL-------------KDIVDPT-------LKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK--LKEITA 695 (721)
Q Consensus 641 ~~~-~~~-------------~~~~d~~-------l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~--L~~i~~ 695 (721)
... .+. ....+.. ........+.++.+|+.+||+.||++|||+.|+++. ++++..
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~ 323 (360)
T 3e3p_A 246 RVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELHD 323 (360)
T ss_dssp HHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGGGC
T ss_pred HHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCccccccCC
Confidence 110 000 0000000 001112256789999999999999999999999874 555544
No 238
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=1.2e-35 Score=317.01 Aligned_cols=242 Identities=21% Similarity=0.327 Sum_probs=173.6
Q ss_pred hhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccchhhHHHHHHHHHHH-HHhcCCCCccceEeEEEecCCCceEEE
Q 004979 430 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKID-TLSKVNHKNFVNLIGYCEEDEPFTRMM 507 (721)
Q Consensus 430 ~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~-~l~~l~H~nIv~l~g~~~~~~~~~~~l 507 (721)
++++.+|+|+||.||+|+.. +++.||||++..... .....++..|+. +++.++||||+++++++...+ ..++
T Consensus 25 ~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~--~~~l 98 (327)
T 3aln_A 25 KDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVD----EKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREG--DCWI 98 (327)
T ss_dssp EC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCC----HHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSS--EEEE
T ss_pred hehheeccCCCEEEEEEEEcCCCCEEEEEEeecccC----chHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCC--ceEE
Confidence 56788999999999999975 688999998865422 222345556665 778889999999999998876 6799
Q ss_pred EEecCCCCChhhhhhh---ccCCCCCHHHHHHHHHHHHHHHHHHhcC-CCCeEeeCCCCCCeEeCCCCcEEEeccCCCCC
Q 004979 508 VFEYSPNGSLFEHLHI---QEAEHLDWAMRLRIAMGMAYCLEHMHQL-TPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN 583 (721)
Q Consensus 508 V~Ey~~~GsL~~~l~~---~~~~~l~~~~~~~ia~~ia~gL~yLH~~-~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~ 583 (721)
||||+++ +|.+++.. .....+++..+..++.|++.||.|||+. + |+||||||+|||++.++.+||+|||+++.
T Consensus 99 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~--ivH~dlkp~NIll~~~~~~kl~Dfg~~~~ 175 (327)
T 3aln_A 99 CMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLK--IIHRDIKPSNILLDRSGNIKLCDFGISGQ 175 (327)
T ss_dssp EECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHS--CCCSCCCGGGEEEETTTEEEECCCSSSCC
T ss_pred EEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCC--EeECCCCHHHEEEcCCCCEEEccCCCcee
Confidence 9999975 88777652 1246789999999999999999999997 7 99999999999999999999999999864
Q ss_pred CC--------CCCccccchhhc----ccCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCccccC
Q 004979 584 TT--------AAKTGSAAMELL----ETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVD 651 (721)
Q Consensus 584 ~~--------~~~~~~~apE~~----~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d 651 (721)
.. .++..|+|||.+ ....++.++|||||||++|||+||+.||....... +.......+. .
T Consensus 176 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~-------~ 247 (327)
T 3aln_A 176 LVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVF-DQLTQVVKGD-------P 247 (327)
T ss_dssp ------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC--------CCCCCSC-------C
T ss_pred cccccccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHH-HHHHHHhcCC-------C
Confidence 32 345578999998 46678999999999999999999999996432111 1111111110 0
Q ss_pred Cccc-cccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004979 652 PTLK-SFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 688 (721)
Q Consensus 652 ~~l~-~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 688 (721)
+.+. .....++.++.+++.+||+.||++||++.|+++
T Consensus 248 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 248 PQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp CCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence 1111 111234578999999999999999999999976
No 239
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=4.4e-36 Score=326.04 Aligned_cols=251 Identities=18% Similarity=0.283 Sum_probs=192.4
Q ss_pred hhhhCcCCCCceeEEEEEEe-cCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCC-----------CCccceEeEE
Q 004979 429 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN-----------HKNFVNLIGY 496 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~-~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~-----------H~nIv~l~g~ 496 (721)
+++++.+|+|+||+||+|+. .+++.||||++... ....+.+.+|++++.+++ |+||++++++
T Consensus 21 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~------~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~ 94 (373)
T 1q8y_A 21 YILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD------KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDH 94 (373)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC------HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEE
T ss_pred EEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC------ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHH
Confidence 46788999999999999996 56889999988632 223456889999998886 8999999999
Q ss_pred EecCC--CceEEEEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcC-CCCeEeeCCCCCCeEeC-----
Q 004979 497 CEEDE--PFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQL-TPPIAHRNLQSSSIYLT----- 568 (721)
Q Consensus 497 ~~~~~--~~~~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~-~~~IvHrDLKp~NILl~----- 568 (721)
+...+ ....++||||+ +++|.+++.......+++..+..|+.||+.||+|||+. + |+||||||+|||++
T Consensus 95 ~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~--ivH~Dikp~NIll~~~~~~ 171 (373)
T 1q8y_A 95 FNHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCG--IIHTDIKPENVLMEIVDSP 171 (373)
T ss_dssp EEEEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC--EECSCCSGGGEEEEEEETT
T ss_pred hhccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCC--EEecCCChHHeEEeccCCC
Confidence 87532 23579999999 99999999765556799999999999999999999997 8 99999999999994
Q ss_pred -CCCcEEEeccCCCCCC------CCCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCCCC----HHHHHH
Q 004979 569 -EDYAAKISDFSFWNNT------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGS----LENWAS 637 (721)
Q Consensus 569 -~~~~~kL~DFGla~~~------~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~----~~~~~~ 637 (721)
..+.+||+|||+++.. ..++..|+|||.+.+..++.++|||||||++|||+||+.||...... ......
T Consensus 172 ~~~~~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~ 251 (373)
T 1q8y_A 172 ENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIA 251 (373)
T ss_dssp TTEEEEEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHH
T ss_pred cCcceEEEcccccccccCCCCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHH
Confidence 4558999999997532 23456799999999999999999999999999999999999743311 111111
Q ss_pred HHhh--cCCC-------------------CccccCC----------ccccccHHHHHHHHHHHHHcccCCCCCCCCHHHH
Q 004979 638 EYLK--GEQP-------------------LKDIVDP----------TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGI 686 (721)
Q Consensus 638 ~~~~--~~~~-------------------~~~~~d~----------~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev 686 (721)
.... +..+ ...+... ....++.....++.+|+.+||+.||++|||+.|+
T Consensus 252 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~el 331 (373)
T 1q8y_A 252 QIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGL 331 (373)
T ss_dssp HHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHH
T ss_pred HHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHH
Confidence 1111 0000 0000000 0012345678899999999999999999999999
Q ss_pred HH
Q 004979 687 AA 688 (721)
Q Consensus 687 l~ 688 (721)
++
T Consensus 332 l~ 333 (373)
T 1q8y_A 332 VN 333 (373)
T ss_dssp HT
T ss_pred hh
Confidence 87
No 240
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=2.6e-35 Score=312.61 Aligned_cols=241 Identities=19% Similarity=0.269 Sum_probs=178.2
Q ss_pred hhhCcCCCCceeEEEEEEec-CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEEEE
Q 004979 430 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 508 (721)
Q Consensus 430 ~ii~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~lV 508 (721)
++++.+|+|+||.||+|+.. +++.||||++...... ....+.+.++..+++.++||||+++++++.+.+ ..++|
T Consensus 28 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~--~~~lv 102 (318)
T 2dyl_A 28 ENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNK---EENKRILMDLDVVLKSHDCPYIVQCFGTFITNT--DVFIA 102 (318)
T ss_dssp EEEEEC------CEEEEEETTTCCEEEEEEEETTSCH---HHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS--EEEEE
T ss_pred cccceeeecCCeeEEEEEEecCCeEEEEEEecccccc---hHHHHHHHHHHHHHHhcCCCceeeEEEEEecCC--cEEEE
Confidence 67788999999999999975 6889999988654321 222344555666788899999999999998876 67999
Q ss_pred EecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcC-CCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCC---
Q 004979 509 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQL-TPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT--- 584 (721)
Q Consensus 509 ~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~-~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~--- 584 (721)
|||+ ++.+..+. ......+++..+..++.|++.||+|||+. + |+||||||+|||++.++.+||+|||+++..
T Consensus 103 ~e~~-~~~~~~l~-~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~--i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 178 (318)
T 2dyl_A 103 MELM-GTCAEKLK-KRMQGPIPERILGKMTVAIVKALYYLKEKHG--VIHRDVKPSNILLDERGQIKLCDFGISGRLVDD 178 (318)
T ss_dssp ECCC-SEEHHHHH-HHHTSCCCHHHHHHHHHHHHHHHHHHHHHHC--CCCCCCCGGGEEECTTSCEEECCCTTC------
T ss_pred Eecc-CCcHHHHH-HHhccCCCHHHHHHHHHHHHHHHHHHHhhCC--EEeCCCCHHHEEECCCCCEEEEECCCchhccCC
Confidence 9999 45554444 33356799999999999999999999984 7 999999999999999999999999987533
Q ss_pred -----CCCCccccchhhcc-----cCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcc
Q 004979 585 -----TAAKTGSAAMELLE-----TSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTL 654 (721)
Q Consensus 585 -----~~~~~~~~apE~~~-----~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 654 (721)
..++..|+|||.+. ...++.++|||||||++|||+||+.||..... ..+.......+..+.. +
T Consensus 179 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-~~~~~~~~~~~~~~~~----~-- 251 (318)
T 2dyl_A 179 KAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKT-DFEVLTKVLQEEPPLL----P-- 251 (318)
T ss_dssp --------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCS-HHHHHHHHHHSCCCCC----C--
T ss_pred ccccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCc-cHHHHHHHhccCCCCC----C--
Confidence 23456799999984 56788999999999999999999999964332 2333344443322111 0
Q ss_pred ccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004979 655 KSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 688 (721)
Q Consensus 655 ~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 688 (721)
....++.++.+++.+||+.||.+||++.|+++
T Consensus 252 --~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 252 --GHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp --SSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred --ccCCCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 01124467889999999999999999999986
No 241
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=3.2e-36 Score=334.47 Aligned_cols=241 Identities=18% Similarity=0.274 Sum_probs=182.3
Q ss_pred hhhhhhCcCCCCceeEEEEEEecCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcC-CCCccceEeEEEecCCCceE
Q 004979 427 DFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPFTR 505 (721)
Q Consensus 427 ~~~~ii~~lg~G~~g~Vyk~~~~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l-~H~nIv~l~g~~~~~~~~~~ 505 (721)
+++.+.+.+|+|+||+||.+...+|+.||||++.... .+.+.+|++++.++ +|||||++++++.+.+ ..
T Consensus 15 ~~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~--------~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~--~~ 84 (434)
T 2rio_A 15 NLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF--------CDIALMEIKLLTESDDHPNVIRYYCSETTDR--FL 84 (434)
T ss_dssp SCEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGGG--------HHHHHHHHHHHHHHTTSTTBCCEEEEEECSS--EE
T ss_pred heeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHH--------HHHHHHHHHHHHhccCCCCcCeEEEEEecCC--eE
Confidence 3444456789999999987766779999999885421 24578899999876 8999999999998776 67
Q ss_pred EEEEecCCCCChhhhhhhccCCC-----CCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCC-----------
Q 004979 506 MMVFEYSPNGSLFEHLHIQEAEH-----LDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTE----------- 569 (721)
Q Consensus 506 ~lV~Ey~~~GsL~~~l~~~~~~~-----l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~----------- 569 (721)
++||||+. |+|.+++....... ..+..+..|+.||+.||+|||+++ |+||||||+|||++.
T Consensus 85 ~lv~E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivHrDLkp~NILl~~~~~~~~~~~~~ 161 (434)
T 2rio_A 85 YIALELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK--IIHRDLKPQNILVSTSSRFTADQQTG 161 (434)
T ss_dssp EEEECCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEEECCHHHHSCCTTC
T ss_pred EEEEecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCC--ccccCCChHhEEEecCcccccccccC
Confidence 99999995 79999996432211 123345789999999999999998 999999999999965
Q ss_pred --CCcEEEeccCCCCCCC-------------CCCccccchhhccc-------CCCCCCccHHHHHHHHHHHHh-CCCccc
Q 004979 570 --DYAAKISDFSFWNNTT-------------AAKTGSAAMELLET-------SAVDLESNVYSFGTILFEMIT-GRISYS 626 (721)
Q Consensus 570 --~~~~kL~DFGla~~~~-------------~~~~~~~apE~~~~-------~~~s~ksDVwSfGvvL~Ellt-G~~P~~ 626 (721)
++.+||+|||+++... .++..|+|||.+.+ ..++.++|||||||++|||+| |+.||.
T Consensus 162 ~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~ 241 (434)
T 2rio_A 162 AENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFG 241 (434)
T ss_dssp CCSCEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTC
T ss_pred CCceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCC
Confidence 4589999999876322 34567999999865 678999999999999999999 999996
Q ss_pred CCCCCHHHHHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004979 627 IENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 688 (721)
Q Consensus 627 ~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 688 (721)
....... ....+....... ........+.++.+++.+||+.||++||++.||++
T Consensus 242 ~~~~~~~----~i~~~~~~~~~~----~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 242 DKYSRES----NIIRGIFSLDEM----KCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp STTTHHH----HHHHTCCCCCCC----TTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CchhhHH----HHhcCCCCcccc----cccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 4332221 222222111111 01123467788999999999999999999999985
No 242
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=7.3e-36 Score=320.29 Aligned_cols=242 Identities=17% Similarity=0.243 Sum_probs=168.7
Q ss_pred hhhC-cCCCCceeEEEEEEec-CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecC--CCceE
Q 004979 430 NIIG-SFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEED--EPFTR 505 (721)
Q Consensus 430 ~ii~-~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~--~~~~~ 505 (721)
.+++ .+|+|+||+||+|+.. +++.||||++.... . ...+....+..++||||+++++++... +....
T Consensus 31 ~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~------~---~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 101 (336)
T 3fhr_A 31 QLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP------K---ARQEVDHHWQASGGPHIVCILDVYENMHHGKRCL 101 (336)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH------H---HHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred EecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH------H---HHHHHHHHHHhcCCCChHHHHHHHhhccCCCceE
Confidence 5555 4899999999999976 68899999885321 1 112222345667999999999998752 12247
Q ss_pred EEEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCC---CCcEEEeccCCCC
Q 004979 506 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTE---DYAAKISDFSFWN 582 (721)
Q Consensus 506 ~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~---~~~~kL~DFGla~ 582 (721)
++||||+++|+|.+++.......+++..+..|+.|++.||+|||+.+ |+||||||+|||++. ++.+||+|||+++
T Consensus 102 ~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~--ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~ 179 (336)
T 3fhr_A 102 LIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHN--IAHRDVKPENLLYTSKEKDAVLKLTDFGFAK 179 (336)
T ss_dssp EEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEESCSSTTCCEEECCCTTCE
T ss_pred EEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEEecCCCceEEEeccccce
Confidence 99999999999999997655567999999999999999999999998 999999999999986 4569999999986
Q ss_pred CCC-------CCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHH--HHHHHHhhcCCCCccccCCc
Q 004979 583 NTT-------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLE--NWASEYLKGEQPLKDIVDPT 653 (721)
Q Consensus 583 ~~~-------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~--~~~~~~~~~~~~~~~~~d~~ 653 (721)
... .++..|+|||.+....++.++|||||||++|||+||+.||........ ............. ..
T Consensus 180 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~---~~-- 254 (336)
T 3fhr_A 180 ETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGF---PN-- 254 (336)
T ss_dssp EC----------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------CC---CT--
T ss_pred eccccccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhcccccc---Cc--
Confidence 332 235678999999888899999999999999999999999964332111 0000100000000 00
Q ss_pred cccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004979 654 LKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 689 (721)
Q Consensus 654 l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 689 (721)
.....++.++.+++.+||+.||++|||+.|+++.
T Consensus 255 --~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 288 (336)
T 3fhr_A 255 --PEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNH 288 (336)
T ss_dssp --TTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred --hhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 1112345778999999999999999999999973
No 243
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=2e-36 Score=320.66 Aligned_cols=235 Identities=22% Similarity=0.376 Sum_probs=184.0
Q ss_pred hhhhCcCCCCceeEEEEEEe-cCCcEEEEEEeeeccccchhh-HHHHHHHHHHHHHhcC----CCCccceEeEEEecCCC
Q 004979 429 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSK-NLESQFRKKIDTLSKV----NHKNFVNLIGYCEEDEP 502 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~-~~~~~vavk~~~~~~~~~~~~-~~~~~f~~Ei~~l~~l----~H~nIv~l~g~~~~~~~ 502 (721)
+++.+.+|+|+||.||+|+. .+++.||||++.......... .....+.+|++++.++ +||||+++++++...+
T Consensus 33 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~~~- 111 (312)
T 2iwi_A 33 YRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQE- 111 (312)
T ss_dssp CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC-----
T ss_pred eEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEecCC-
Confidence 47788899999999999985 468899999986543221110 1223467789999888 8999999999998776
Q ss_pred ceEEEEEec-CCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeC-CCCcEEEeccCC
Q 004979 503 FTRMMVFEY-SPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLT-EDYAAKISDFSF 580 (721)
Q Consensus 503 ~~~~lV~Ey-~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~-~~~~~kL~DFGl 580 (721)
..++|||| +.+++|.+++.. ...+++..+..++.||+.||+|||+.+ |+||||||+||+++ +++.+||+|||+
T Consensus 112 -~~~~v~e~~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~Nil~~~~~~~~kl~dfg~ 186 (312)
T 2iwi_A 112 -GFMLVLERPLPAQDLFDYITE--KGPLGEGPSRCFFGQVVAAIQHCHSRG--VVHRDIKDENILIDLRRGCAKLIDFGS 186 (312)
T ss_dssp --CEEEEECCSSEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHHT--EECCCCSGGGEEEETTTTEEEECCCSS
T ss_pred -eEEEEEEecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC--eeecCCChhhEEEeCCCCeEEEEEcch
Confidence 56899999 789999999864 346899999999999999999999988 99999999999999 889999999998
Q ss_pred CCCCC-------CCCccccchhhcccCCCC-CCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCccccCC
Q 004979 581 WNNTT-------AAKTGSAAMELLETSAVD-LESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDP 652 (721)
Q Consensus 581 a~~~~-------~~~~~~~apE~~~~~~~s-~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 652 (721)
++... .++..|+|||.+....+. .++|||||||++|||+||+.||... .+ .......
T Consensus 187 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~----~~----~~~~~~~------- 251 (312)
T 2iwi_A 187 GALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERD----QE----ILEAELH------- 251 (312)
T ss_dssp CEECCSSCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH----HH----HHHTCCC-------
T ss_pred hhhcccCcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCCh----HH----HhhhccC-------
Confidence 75332 345679999998776664 5899999999999999999999532 11 1111111
Q ss_pred ccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004979 653 TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 688 (721)
Q Consensus 653 ~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 688 (721)
++.....++.+++.+||+.||++||++.|+++
T Consensus 252 ----~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~ 283 (312)
T 2iwi_A 252 ----FPAHVSPDCCALIRRCLAPKPSSRPSLEEILL 283 (312)
T ss_dssp ----CCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred ----CcccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 12334567889999999999999999999987
No 244
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=4.9e-35 Score=308.39 Aligned_cols=226 Identities=18% Similarity=0.302 Sum_probs=175.8
Q ss_pred hhh-CcCCCCceeEEEEEEe-cCCcEEEEEEeeeccccchhhHHHHHHHHHHHHH-hcCCCCccceEeEEEec--CCCce
Q 004979 430 NII-GSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTL-SKVNHKNFVNLIGYCEE--DEPFT 504 (721)
Q Consensus 430 ~ii-~~lg~G~~g~Vyk~~~-~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l-~~l~H~nIv~l~g~~~~--~~~~~ 504 (721)
.++ +.+|+|+||.||+|+. .+++.||+|++... ..+.+|++++ +..+||||+++++++.. .+...
T Consensus 20 ~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----------~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 89 (299)
T 3m2w_A 20 KVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC----------PKARREVELHWRASQCPHIVRIVDVYENLYAGRKC 89 (299)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS----------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEE
T ss_pred hhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc----------HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCce
Confidence 444 5689999999999996 56889999988531 3467888887 56699999999999875 22226
Q ss_pred EEEEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCC---CCcEEEeccCCC
Q 004979 505 RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTE---DYAAKISDFSFW 581 (721)
Q Consensus 505 ~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~---~~~~kL~DFGla 581 (721)
.++||||+++|+|.+++.......+++..+..++.|++.||+|||+.+ |+||||||+|||++. ++.+||+|||++
T Consensus 90 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a 167 (299)
T 3m2w_A 90 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFA 167 (299)
T ss_dssp EEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEESSSSTTCCEEECCCTTC
T ss_pred EEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHEEEecCCCCCcEEEeccccc
Confidence 799999999999999997655567999999999999999999999998 999999999999998 789999999987
Q ss_pred CCCCCCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc---
Q 004979 582 NNTTAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ--- 658 (721)
Q Consensus 582 ~~~~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~--- 658 (721)
.... ...++.++|||||||++|||+||+.||....... .. ......+.......+
T Consensus 168 ~~~~-------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~------~~---~~~~~~~~~~~~~~~~~~ 225 (299)
T 3m2w_A 168 KETT-------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA------IS---PGMKTRIRMGQYEFPNPE 225 (299)
T ss_dssp EECT-------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC----------------CCSCCSSCTTCCSSCHHH
T ss_pred cccc-------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchh------hh---HHHHHHHhhccccCCchh
Confidence 5432 3457789999999999999999999996432110 00 000111111111111
Q ss_pred -HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004979 659 -ENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 689 (721)
Q Consensus 659 -~~~~~~l~~li~~Cl~~dP~~RPs~~evl~~ 689 (721)
..++.++.+++.+||+.||++||++.|+++.
T Consensus 226 ~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 257 (299)
T 3m2w_A 226 WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 257 (299)
T ss_dssp HTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cccCCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 2356789999999999999999999999873
No 245
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=3.7e-36 Score=320.30 Aligned_cols=235 Identities=19% Similarity=0.357 Sum_probs=188.8
Q ss_pred hhhhCcCCCCceeEEEEEEe-cCCcEEEEEEeeeccccchhh-HHHHHHHHHHHHHhcCC--CCccceEeEEEecCCCce
Q 004979 429 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSK-NLESQFRKKIDTLSKVN--HKNFVNLIGYCEEDEPFT 504 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~-~~~~~vavk~~~~~~~~~~~~-~~~~~f~~Ei~~l~~l~--H~nIv~l~g~~~~~~~~~ 504 (721)
+++.+.+|+|+||+||+|+. .+++.||||++.......... ...+.+.+|++++++++ |+||+++++++...+ .
T Consensus 45 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~--~ 122 (320)
T 3a99_A 45 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPD--S 122 (320)
T ss_dssp EEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSS--E
T ss_pred eEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCC--c
Confidence 47788999999999999985 468889999987543221100 11245778999999996 599999999998877 6
Q ss_pred EEEEEecCCC-CChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeC-CCCcEEEeccCCCC
Q 004979 505 RMMVFEYSPN-GSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLT-EDYAAKISDFSFWN 582 (721)
Q Consensus 505 ~~lV~Ey~~~-GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~-~~~~~kL~DFGla~ 582 (721)
.++||||+.+ ++|.+++.. ...+++..+..++.||+.||+|||+.+ |+||||||+|||++ +++.+||+|||+++
T Consensus 123 ~~lv~e~~~~~~~L~~~l~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~--ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~ 198 (320)
T 3a99_A 123 FVLILERPEPVQDLFDFITE--RGALQEELARSFFWQVLEAVRHCHNCG--VLHRDIKDENILIDLNRGELKLIDFGSGA 198 (320)
T ss_dssp EEEEEECCSSEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred EEEEEEcCCCCccHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC--cEeCCCCHHHEEEeCCCCCEEEeeCcccc
Confidence 7999999976 899999864 356899999999999999999999998 99999999999999 78999999999875
Q ss_pred CCC-------CCCccccchhhcccCCC-CCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcc
Q 004979 583 NTT-------AAKTGSAAMELLETSAV-DLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTL 654 (721)
Q Consensus 583 ~~~-------~~~~~~~apE~~~~~~~-s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 654 (721)
... .++..|+|||.+....+ +.++|||||||++|||+||+.||.... + .......
T Consensus 199 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~----~----~~~~~~~--------- 261 (320)
T 3a99_A 199 LLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE----E----IIRGQVF--------- 261 (320)
T ss_dssp ECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH----H----HHHCCCC---------
T ss_pred ccccccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh----h----hhccccc---------
Confidence 332 34567999999877665 688999999999999999999995321 1 1111111
Q ss_pred ccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004979 655 KSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 688 (721)
Q Consensus 655 ~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 688 (721)
.....+.++.+++.+||+.||++||++.||++
T Consensus 262 --~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 262 --FRQRVSSECQHLIRWCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp --CSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred --ccccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 11233467889999999999999999999976
No 246
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=7.1e-35 Score=323.06 Aligned_cols=235 Identities=19% Similarity=0.256 Sum_probs=178.1
Q ss_pred hhhCcCCCCceeEEEEEEecCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcC-CCCccceEeEEEecCCCceEEEE
Q 004979 430 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPFTRMMV 508 (721)
Q Consensus 430 ~ii~~lg~G~~g~Vyk~~~~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l-~H~nIv~l~g~~~~~~~~~~~lV 508 (721)
++.+.+|+|+||+||.....+++.||||++..... ..+.+|+++|+++ +|||||++++++.+.+ ..++|
T Consensus 27 ~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~--------~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~--~~~lv 96 (432)
T 3p23_A 27 CPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF--------SFADREVQLLRESDEHPNVIRYFCTEKDRQ--FQYIA 96 (432)
T ss_dssp EEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE--------EECHHHHHHHHHSCCCTTBCCEEEEEEETT--EEEEE
T ss_pred ecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH--------HHHHHHHHHHHhccCCCCcCeEEEEEecCC--EEEEE
Confidence 45667899999996655556789999998864322 1256899999999 8999999999998876 67999
Q ss_pred EecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCC-----CCcEEEeccCCCCC
Q 004979 509 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTE-----DYAAKISDFSFWNN 583 (721)
Q Consensus 509 ~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~-----~~~~kL~DFGla~~ 583 (721)
|||+. |+|.+++.... ..+.+..+..|+.||+.||+|||+.+ |+||||||+|||++. ...+||+|||+++.
T Consensus 97 ~E~~~-g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~ 172 (432)
T 3p23_A 97 IELCA-ATLQEYVEQKD-FAHLGLEPITLLQQTTSGLAHLHSLN--IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKK 172 (432)
T ss_dssp EECCS-EEHHHHHHSSS-CCCCSSCHHHHHHHHHHHHHHHHHTT--CCCCCCSTTSEEECCCBTTTBCCEEECCTTEEEC
T ss_pred EECCC-CCHHHHHHhcC-CCccchhHHHHHHHHHHHHHHHHHCc--CEeCCCCHHHEEEecCCCCCceeEEEecccceee
Confidence 99996 69999986432 33445556789999999999999998 999999999999953 34688999998754
Q ss_pred CC------------CCCccccchhhcc---cCCCCCCccHHHHHHHHHHHHh-CCCcccCCCCCHHHHHHHHhhcCCCCc
Q 004979 584 TT------------AAKTGSAAMELLE---TSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLK 647 (721)
Q Consensus 584 ~~------------~~~~~~~apE~~~---~~~~s~ksDVwSfGvvL~Ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~ 647 (721)
.. .++..|+|||.+. ...++.++|||||||++|||+| |+.||....... ... ........
T Consensus 173 ~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~---~~~-~~~~~~~~ 248 (432)
T 3p23_A 173 LAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQ---ANI-LLGACSLD 248 (432)
T ss_dssp C------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHH---HHH-HTTCCCCT
T ss_pred ccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHH---HHH-HhccCCcc
Confidence 32 2566899999987 4677889999999999999999 999985332211 111 11111111
Q ss_pred cccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004979 648 DIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 688 (721)
Q Consensus 648 ~~~d~~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 688 (721)
. . .........+.+|+.+||+.||++||++.||++
T Consensus 249 ~-~-----~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 249 C-L-----HPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp T-S-----CTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred c-c-----CccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 1 1 112344567889999999999999999999984
No 247
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=1.2e-34 Score=332.39 Aligned_cols=261 Identities=20% Similarity=0.229 Sum_probs=195.1
Q ss_pred hhhhCcCCCCceeEEEEEEe-cCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecC----CCc
Q 004979 429 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEED----EPF 503 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~-~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~----~~~ 503 (721)
+++.+.+|+|+||+||+|.. .++..||||++.... .....+.+.+|++++++++|||||++++++... ...
T Consensus 16 Y~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~----~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~ 91 (676)
T 3qa8_A 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQEL----SPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPND 91 (676)
T ss_dssp -CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCC----CHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTS
T ss_pred eEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccC----CHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCC
Confidence 47889999999999999986 468899999875432 234457799999999999999999999987651 122
Q ss_pred eEEEEEecCCCCChhhhhhhcc-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCc---EEEeccC
Q 004979 504 TRMMVFEYSPNGSLFEHLHIQE-AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYA---AKISDFS 579 (721)
Q Consensus 504 ~~~lV~Ey~~~GsL~~~l~~~~-~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~---~kL~DFG 579 (721)
..++||||+++|+|.+++.... ...+++..+..|+.|++.||+|||+.+ |+||||||+|||++.++. +||+|||
T Consensus 92 ~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~g--IVHrDLKP~NILl~~~g~~~~vKL~DFG 169 (676)
T 3qa8_A 92 LPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENR--IIHRDLKPENIVLQPGPQRLIHKIIDLG 169 (676)
T ss_dssp SCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTT--BCCCCCCSTTEEEECCSSSCEEEECSCC
T ss_pred eEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC--CccCCCCHHHeEeecCCCceeEEEcccc
Confidence 5689999999999999987432 236889999999999999999999988 999999999999997664 9999999
Q ss_pred CCCCCC--------CCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcC---CCCcc
Q 004979 580 FWNNTT--------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGE---QPLKD 648 (721)
Q Consensus 580 la~~~~--------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~---~~~~~ 648 (721)
+++... .++..|+|||.+.+..++.++|||||||++|||+||+.||.... ....|........ ....+
T Consensus 170 ~a~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~-~~~~~~~~i~~~~~~~~~~~~ 248 (676)
T 3qa8_A 170 YAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNW-QPVQWHGKVREKSNEHIVVYD 248 (676)
T ss_dssp CCCBTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSC-HHHHSSTTCC------CCSCC
T ss_pred cccccccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCccc-chhhhhhhhhcccchhhhhhh
Confidence 986432 24567899999999999999999999999999999999996321 1111111000000 00000
Q ss_pred ccC---------CccccccHHHHHHHHHHHHHcccCCCCCCCCHHHH-----HHHHHHhhhc
Q 004979 649 IVD---------PTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGI-----AAKLKEITAM 696 (721)
Q Consensus 649 ~~d---------~~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~ev-----l~~L~~i~~~ 696 (721)
... +.........+.++.+++.+||..||++|||+.|+ .+.++++...
T Consensus 249 ~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL~~ 310 (676)
T 3qa8_A 249 DLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILSL 310 (676)
T ss_dssp CCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHHCC
T ss_pred hhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHHhc
Confidence 000 11112345678899999999999999999999884 4555555443
No 248
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=3.4e-34 Score=335.99 Aligned_cols=234 Identities=18% Similarity=0.273 Sum_probs=185.4
Q ss_pred hhhhCcCCCCceeEEEEEEec--CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCC---c
Q 004979 429 SNIIGSFSDGTVGTVYKGTLS--SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEP---F 503 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~~--~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~---~ 503 (721)
+++++.+|+|+||+||+|+.. +++.|+||++.... .......|.+|++++++++|||||++++++...+. .
T Consensus 82 y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~----~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 157 (681)
T 2pzi_A 82 YEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSG----DAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDP 157 (681)
T ss_dssp EEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSC----CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCE
T ss_pred eEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccC----CHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCc
Confidence 477889999999999999975 57889999875432 12345678999999999999999999999987542 1
Q ss_pred eEEEEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCC
Q 004979 504 TRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN 583 (721)
Q Consensus 504 ~~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~ 583 (721)
..||||||+++++|.+++. ..++|..++.|+.||+.||+|||+++ |+||||||+|||++++ .+||+|||+++.
T Consensus 158 ~~~lv~E~~~g~~L~~~~~----~~l~~~~~~~~~~qi~~aL~~lH~~g--iiHrDlkp~NIll~~~-~~kl~DFG~a~~ 230 (681)
T 2pzi_A 158 VGYIVMEYVGGQSLKRSKG----QKLPVAEAIAYLLEILPALSYLHSIG--LVYNDLKPENIMLTEE-QLKLIDLGAVSR 230 (681)
T ss_dssp EEEEEEECCCCEECC--------CCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECSS-CEEECCCTTCEE
T ss_pred eeEEEEEeCCCCcHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHHCC--CeecccChHHeEEeCC-cEEEEecccchh
Confidence 1599999999999998764 26999999999999999999999998 9999999999999986 899999999864
Q ss_pred CC-----CCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004979 584 TT-----AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 658 (721)
Q Consensus 584 ~~-----~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 658 (721)
.. .++..|+|||.+.+.. +.++|||||||++|||++|..||..... ..+. . ....
T Consensus 231 ~~~~~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~-------------~~~~----~--~~~~ 290 (681)
T 2pzi_A 231 INSFGYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYV-------------DGLP----E--DDPV 290 (681)
T ss_dssp TTCCSCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEEC-------------SSCC----T--TCHH
T ss_pred cccCCccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCccccc-------------cccc----c--cccc
Confidence 32 3567899999987654 8999999999999999999988752110 0000 0 0111
Q ss_pred HHHHHHHHHHHHHcccCCCCCCC-CHHHHHHHHHHh
Q 004979 659 ENVLEELLVVIKNCVHPDPKQRP-SMRGIAAKLKEI 693 (721)
Q Consensus 659 ~~~~~~l~~li~~Cl~~dP~~RP-s~~evl~~L~~i 693 (721)
......+.+++.+||+.||++|| +++++...|..+
T Consensus 291 ~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 326 (681)
T 2pzi_A 291 LKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGV 326 (681)
T ss_dssp HHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred cccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHH
Confidence 23456788999999999999999 566677766654
No 249
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=5.5e-34 Score=314.40 Aligned_cols=235 Identities=12% Similarity=0.143 Sum_probs=171.0
Q ss_pred hhCcCCCCceeEEEEEEe-cCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCC-CccceE---------e-----
Q 004979 431 IIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNH-KNFVNL---------I----- 494 (721)
Q Consensus 431 ii~~lg~G~~g~Vyk~~~-~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H-~nIv~l---------~----- 494 (721)
..+.||+|+||+||+|+. .+++.||||++....... ....+.|.+|+.+++.++| +|+..+ .
T Consensus 82 ~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~--~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 159 (413)
T 3dzo_A 82 RGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPP--SNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKD 159 (413)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC------CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEEC
T ss_pred EecccccCCCEEEEEEEecCCCCceEEEEEecCCCcc--HHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhccc
Confidence 345788999999999994 578999999886433222 2224679999999999987 322111 1
Q ss_pred -------EEEecCC---CceEEEEEecCCCCChhhhhhh-----ccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeC
Q 004979 495 -------GYCEEDE---PFTRMMVFEYSPNGSLFEHLHI-----QEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRN 559 (721)
Q Consensus 495 -------g~~~~~~---~~~~~lV~Ey~~~GsL~~~l~~-----~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrD 559 (721)
.++.... ....+++|+++ +|+|.+++.. .....+++..++.|+.||+.||+|||+++ |+|||
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~--iiHrD 236 (413)
T 3dzo_A 160 PQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG--LVHTY 236 (413)
T ss_dssp CC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT--EECSC
T ss_pred CCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCC
Confidence 1111111 12346777765 7899998841 22345788899999999999999999998 99999
Q ss_pred CCCCCeEeCCCCcEEEeccCCCCCC------CCCCccccchhhc----------ccCCCCCCccHHHHHHHHHHHHhCCC
Q 004979 560 LQSSSIYLTEDYAAKISDFSFWNNT------TAAKTGSAAMELL----------ETSAVDLESNVYSFGTILFEMITGRI 623 (721)
Q Consensus 560 LKp~NILl~~~~~~kL~DFGla~~~------~~~~~~~~apE~~----------~~~~~s~ksDVwSfGvvL~ElltG~~ 623 (721)
|||+|||++.++.+||+|||+++.. ..+ ..|+|||.+ ....++.++|||||||++|||+||+.
T Consensus 237 iKp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~ 315 (413)
T 3dzo_A 237 LRPVDIVLDQRGGVFLTGFEHLVRDGASAVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADL 315 (413)
T ss_dssp CCGGGEEECTTCCEEECCGGGCEETTEEECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSC
T ss_pred cccceEEEecCCeEEEEeccceeecCCccccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCC
Confidence 9999999999999999999997532 234 789999998 55668899999999999999999999
Q ss_pred cccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004979 624 SYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 688 (721)
Q Consensus 624 P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs~~evl~ 688 (721)
||...... .....++.. ...+++++.+|+.+||+.||++||++.|+++
T Consensus 316 Pf~~~~~~------------~~~~~~~~~-----~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~ 363 (413)
T 3dzo_A 316 PNTDDAAL------------GGSEWIFRS-----CKNIPQPVRALLEGFLRYPKEDRLLPLQAME 363 (413)
T ss_dssp CCCTTGGG------------SCSGGGGSS-----CCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCCCcchh------------hhHHHHHhh-----cccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 99643210 111111110 0123467999999999999999999777643
No 250
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=4.6e-34 Score=306.11 Aligned_cols=242 Identities=13% Similarity=0.133 Sum_probs=179.0
Q ss_pred hhhhCcCCCCceeEEEEEEecCCcEEEEEEeeeccccc---hhhHHHHHHHHHHHHHhcCC---------CCccceEeEE
Q 004979 429 SNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRAD---WSKNLESQFRKKIDTLSKVN---------HKNFVNLIGY 496 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~~~~~~vavk~~~~~~~~~---~~~~~~~~f~~Ei~~l~~l~---------H~nIv~l~g~ 496 (721)
+++++.+|+|+||+||+|+. +++.||||++....... ......+.+.+|++++++++ |||||+++++
T Consensus 22 y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~~~ 100 (336)
T 2vuw_A 22 LQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNSV 100 (336)
T ss_dssp HHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEEEE
T ss_pred chheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhcce
Confidence 47788999999999999998 68999999997653210 01122356888888888875 7777777776
Q ss_pred EecC----------------------------CCceEEEEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHH
Q 004979 497 CEED----------------------------EPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHM 548 (721)
Q Consensus 497 ~~~~----------------------------~~~~~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yL 548 (721)
+... +....++||||+++|++.+.+.. ..+++..+..|+.||+.||+||
T Consensus 101 ~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~---~~~~~~~~~~i~~qi~~aL~~l 177 (336)
T 2vuw_A 101 HCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT---KLSSLATAKSILHQLTASLAVA 177 (336)
T ss_dssp EEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT---TCCCHHHHHHHHHHHHHHHHHH
T ss_pred eEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh---cCCCHHHHHHHHHHHHHHHHHH
Confidence 4310 02267999999999987776632 5689999999999999999999
Q ss_pred h-cCCCCeEeeCCCCCCeEeCCCC--------------------cEEEeccCCCCCCC----CCCccccchhhcccCCCC
Q 004979 549 H-QLTPPIAHRNLQSSSIYLTEDY--------------------AAKISDFSFWNNTT----AAKTGSAAMELLETSAVD 603 (721)
Q Consensus 549 H-~~~~~IvHrDLKp~NILl~~~~--------------------~~kL~DFGla~~~~----~~~~~~~apE~~~~~~~s 603 (721)
| +++ |+||||||+|||++.++ .+||+|||+++... .++..|+|||.+.+.. +
T Consensus 178 H~~~~--ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~~~~gt~~y~aPE~~~g~~-~ 254 (336)
T 2vuw_A 178 EASLR--FEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDGIVVFCDVSMDEDLFTGDG-D 254 (336)
T ss_dssp HHHHC--CBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETTEEECCCCTTCSGGGCCCS-S
T ss_pred HHhCC--EeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCCcEEEeecccChhhhcCCC-c
Confidence 9 888 99999999999999887 89999999987543 3567899999998666 8
Q ss_pred CCccHHHHHHH-HHHHHhCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCC
Q 004979 604 LESNVYSFGTI-LFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPS 682 (721)
Q Consensus 604 ~ksDVwSfGvv-L~ElltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~Cl~~dP~~RPs 682 (721)
.++||||+|++ .+++++|..||.... ............ .... ...........+.++.+|+.+||+.| |
T Consensus 255 ~~~Diwsl~~~~~~~~~~g~~p~~~~~-~~~~~~~~~~~~-~~~~---~~~~~~~~~~~s~~~~dli~~~L~~d-----s 324 (336)
T 2vuw_A 255 YQFDIYRLMKKENNNRWGEYHPYSNVL-WLHYLTDKMLKQ-MTFK---TKCNTPAMKQIKRKIQEFHRTMLNFS-----S 324 (336)
T ss_dssp HHHHHHHHHHHHHTTCTTSCCTHHHHH-HHHHHHHHHHHT-CCCS---SCCCSHHHHHHHHHHHHHHHHGGGSS-----S
T ss_pred cceehhhhhCCCCcccccccCCCcchh-hhhHHHHhhhhh-hccC---cccchhhhhhcCHHHHHHHHHHhccC-----C
Confidence 99999998777 788889999984210 000111111111 1111 01112234568889999999999976 8
Q ss_pred HHHHH
Q 004979 683 MRGIA 687 (721)
Q Consensus 683 ~~evl 687 (721)
+.|++
T Consensus 325 a~e~l 329 (336)
T 2vuw_A 325 ATDLL 329 (336)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98887
No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.94 E-value=3.4e-27 Score=269.60 Aligned_cols=180 Identities=13% Similarity=0.089 Sum_probs=125.2
Q ss_pred CCCceeEEEEEE-ecCCcEEEEEEeeecccc-----chhhHHHHHHHHHHHHHhcC-CCCccceEeEEEecCCCceEEEE
Q 004979 436 SDGTVGTVYKGT-LSSGVEIAVTSTSVKSRA-----DWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPFTRMMV 508 (721)
Q Consensus 436 g~G~~g~Vyk~~-~~~~~~vavk~~~~~~~~-----~~~~~~~~~f~~Ei~~l~~l-~H~nIv~l~g~~~~~~~~~~~lV 508 (721)
+.|+.|.+++++ .-.|..++||.+...... .......++|.+|+++|+++ .|+||+++++++.+++ ..|||
T Consensus 243 ~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~--~~yLV 320 (569)
T 4azs_A 243 YAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQ--SGWLV 320 (569)
T ss_dssp C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSS--EEEEE
T ss_pred ccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECC--EEEEE
Confidence 345555555544 345788999988654211 12234456799999999999 7999999999999887 78999
Q ss_pred EecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCCCC--
Q 004979 509 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA-- 586 (721)
Q Consensus 509 ~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~~~-- 586 (721)
|||++||+|.++|.. ...++.. +|+.||+.||+|+|+++ ||||||||+||||++++.+||+|||+++....
T Consensus 321 MEyv~G~~L~d~i~~--~~~l~~~---~I~~QIl~AL~ylH~~G--IIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~ 393 (569)
T 4azs_A 321 MEKLPGRLLSDMLAA--GEEIDRE---KILGSLLRSLAALEKQG--FWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDC 393 (569)
T ss_dssp EECCCSEEHHHHHHT--TCCCCHH---HHHHHHHHHHHHHHHTT--CEESCCCGGGEEECTTSCEEECCCTTEESCC---
T ss_pred EecCCCCcHHHHHHh--CCCCCHH---HHHHHHHHHHHHHHHCC--ceeccCchHhEEECCCCCEEEeecccCeeCCCCC
Confidence 999999999999964 3456653 58999999999999999 99999999999999999999999999875432
Q ss_pred -------CCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCcc
Q 004979 587 -------AKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISY 625 (721)
Q Consensus 587 -------~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~ 625 (721)
++..|+|||.+.+ .+..++|+||+|++++++.++..++
T Consensus 394 ~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~~ 438 (569)
T 4azs_A 394 SWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSNW 438 (569)
T ss_dssp CCSHHHHHHHHHHHHHHC------------------CCCCTTHHHH
T ss_pred ccccCceechhhccHHHhCC-CCCCcccccccccchhhhccccchh
Confidence 3457899999865 4678899999999999887765443
No 252
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.91 E-value=1.1e-24 Score=247.60 Aligned_cols=176 Identities=13% Similarity=0.145 Sum_probs=138.8
Q ss_pred CcCCCCceeEEEEEEecCCcEEEEEEeeeccccch---hhHHHHHHHHHHHHHhcCCCCccceEeEEEecCCCceEEEEE
Q 004979 433 GSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADW---SKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 509 (721)
Q Consensus 433 ~~lg~G~~g~Vyk~~~~~~~~vavk~~~~~~~~~~---~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~~~lV~ 509 (721)
+.+|+|+||+||+|+. .+..+++|+...+..... .....++|.+|++++++++||||+++..++...+ ..++||
T Consensus 342 ~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~--~~~lVm 418 (540)
T 3en9_A 342 HLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLD--NKRIMM 418 (540)
T ss_dssp ------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETT--TTEEEE
T ss_pred CEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCC--ccEEEE
Confidence 4678999999999954 467888887654432211 1123466899999999999999996665555555 459999
Q ss_pred ecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCCCC---
Q 004979 510 EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA--- 586 (721)
Q Consensus 510 Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~~~--- 586 (721)
||+++|+|.+++.. +..|+.|++.||+|||+++ |+||||||+|||+++ .+||+|||+++....
T Consensus 419 E~~~ggsL~~~l~~----------~~~i~~qi~~aL~~LH~~g--IiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~ 484 (540)
T 3en9_A 419 SYINGKLAKDVIED----------NLDIAYKIGEIVGKLHKND--VIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDED 484 (540)
T ss_dssp ECCCSEEHHHHSTT----------CTHHHHHHHHHHHHHHHTT--EECTTCCTTSEEESS--SEEECCCTTCEECCCHHH
T ss_pred ECCCCCCHHHHHHH----------HHHHHHHHHHHHHHHHHCc--CccCCCCHHHEEECC--eEEEEECccCEECCCccc
Confidence 99999999999863 5689999999999999998 999999999999999 999999999875433
Q ss_pred -------------CCccccchhhccc--CCCCCCccHHHHHHHHHHHHhCCCcc
Q 004979 587 -------------AKTGSAAMELLET--SAVDLESNVYSFGTILFEMITGRISY 625 (721)
Q Consensus 587 -------------~~~~~~apE~~~~--~~~s~ksDVwSfGvvL~ElltG~~P~ 625 (721)
++..|+|||++.. ..|+..+|+|+..+-..|.+.++.+|
T Consensus 485 ~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY 538 (540)
T 3en9_A 485 KAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY 538 (540)
T ss_dssp HHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred cccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence 3457899999876 66788899999999999988887776
No 253
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.89 E-value=2.6e-23 Score=220.28 Aligned_cols=158 Identities=27% Similarity=0.473 Sum_probs=147.3
Q ss_pred cCChHHHHHHHHHHHhcccCCCCCCCCCCCCCCCCCCCCCCc--eeeEEeCC----CcEEEEEeCCCCCCC--cCchhhc
Q 004979 68 RCLNSEGMALLRFRERVVRDPFGALSKWSDNDGVGDNVNPCS--WFGVECSD----GKVVILNLRDLCLGG--MLAPELG 139 (721)
Q Consensus 68 ~~~~~~~~~ll~~k~~~~~~~~~~l~~W~~~~~~~~~~~~C~--w~gv~C~~----~~v~~l~L~~~~l~G--~ip~~l~ 139 (721)
.|.+.|..||++||+++. ||. .+.+|+.. .+||. |.||+|+. ++|+.|+|+++++.| .+|+.++
T Consensus 2 ~c~~~~~~aL~~~k~~~~-~~~-~l~~W~~~------~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~ 73 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLG-NPT-TLSSWLPT------TDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLA 73 (313)
T ss_dssp CSCHHHHHHHHHHHHHTT-CCG-GGTTCCTT------SCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGG
T ss_pred CCCHHHHHHHHHHHHhcC-Ccc-cccCCCCC------CCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHh
Confidence 377889999999999984 665 78999653 37898 99999974 799999999999999 9999999
Q ss_pred CCCCCCEEEccC-CcccccCchhhcCCCCCCEeEcccCcccccCCccccCCCCCCEEECccCCCCcCCChhccCCCCCCE
Q 004979 140 QLSELKSIILRN-NSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISE 218 (721)
Q Consensus 140 ~l~~L~~L~L~~-n~l~G~ip~~l~~l~~L~~l~ls~N~l~G~iP~~~~~~~~L~~l~l~~N~~~G~iP~~~~~l~~L~~ 218 (721)
++++|++|+|++ |++.|.+|..++++++|++|+|++|+++|.+|..+.++++|++|+|++|.++|.+|..+..+++|++
T Consensus 74 ~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 153 (313)
T 1ogq_A 74 NLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVG 153 (313)
T ss_dssp GCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCE
T ss_pred CCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCe
Confidence 999999999995 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEccCCCCCCccccc
Q 004979 219 IQVDESWLTNAASRA 233 (721)
Q Consensus 219 l~l~~n~~~g~~p~~ 233 (721)
|+|++|.++|.+|..
T Consensus 154 L~L~~N~l~~~~p~~ 168 (313)
T 1ogq_A 154 ITFDGNRISGAIPDS 168 (313)
T ss_dssp EECCSSCCEEECCGG
T ss_pred EECcCCcccCcCCHH
Confidence 999999999998874
No 254
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.85 E-value=4.5e-22 Score=207.39 Aligned_cols=159 Identities=14% Similarity=0.126 Sum_probs=122.1
Q ss_pred hhhCcCCCCceeEEEEEEecCCcEEEEEEeeecccc-------------chhhHHHHHHHHHHHHHhcCCCCccceEeEE
Q 004979 430 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRA-------------DWSKNLESQFRKKIDTLSKVNHKNFVNLIGY 496 (721)
Q Consensus 430 ~ii~~lg~G~~g~Vyk~~~~~~~~vavk~~~~~~~~-------------~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~ 496 (721)
.+.+.+|+|+||.||+|+..++..||+|.+...... .|.......+.+|+++|++++ | ++++++
T Consensus 93 ~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~~~ 169 (282)
T 1zar_A 93 AIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVPKV 169 (282)
T ss_dssp EEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSCCE
T ss_pred EecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcCeE
Confidence 456789999999999999977899999998643211 011124567999999999999 5 666666
Q ss_pred EecCCCceEEEEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCCCcEEEe
Q 004979 497 CEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKIS 576 (721)
Q Consensus 497 ~~~~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~~~~kL~ 576 (721)
+... ..++||||+++|+|.+ +.. .....++.|++.||+|||+++ |+||||||+|||++ ++.+||+
T Consensus 170 ~~~~---~~~lvmE~~~g~~L~~-l~~--------~~~~~i~~qi~~~l~~lH~~g--iiHrDlkp~NILl~-~~~vkl~ 234 (282)
T 1zar_A 170 YAWE---GNAVLMELIDAKELYR-VRV--------ENPDEVLDMILEEVAKFYHRG--IVHGDLSQYNVLVS-EEGIWII 234 (282)
T ss_dssp EEEE---TTEEEEECCCCEEGGG-CCC--------SCHHHHHHHHHHHHHHHHHTT--EECSCCSTTSEEEE-TTEEEEC
T ss_pred Eecc---ceEEEEEecCCCcHHH-cch--------hhHHHHHHHHHHHHHHHHHCC--CEeCCCCHHHEEEE-CCcEEEE
Confidence 5443 3489999999999988 421 123469999999999999998 99999999999999 9999999
Q ss_pred ccCCCCCCCCCCccccchhhccc----------CCCCCCccHHH
Q 004979 577 DFSFWNNTTAAKTGSAAMELLET----------SAVDLESNVYS 610 (721)
Q Consensus 577 DFGla~~~~~~~~~~~apE~~~~----------~~~s~ksDVwS 610 (721)
|||+++.. ..+.|||.+.. .+|..++|+|.
T Consensus 235 DFG~a~~~----~~~~a~e~l~rdv~~i~~~f~~~~~~~~~~~~ 274 (282)
T 1zar_A 235 DFPQSVEV----GEEGWREILERDVRNIITYFSRTYRTEKDINS 274 (282)
T ss_dssp CCTTCEET----TSTTHHHHHHHHHHHHHHHHHHHHCCCCCHHH
T ss_pred ECCCCeEC----CCCCHHHHHHHHHHHHHHHHHHhcCCCCChHH
Confidence 99998743 34678887642 44556666664
No 255
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.85 E-value=1.1e-21 Score=232.92 Aligned_cols=159 Identities=23% Similarity=0.299 Sum_probs=122.7
Q ss_pred hccCChHHHHHHHHHHHhcccCCCCCCCCCCCCCCCCCCCCCCceeeEEeCCCcEEEEEeCCCCCCCc---Cch------
Q 004979 66 LARCLNSEGMALLRFRERVVRDPFGALSKWSDNDGVGDNVNPCSWFGVECSDGKVVILNLRDLCLGGM---LAP------ 136 (721)
Q Consensus 66 ~~~~~~~~~~~ll~~k~~~~~~~~~~l~~W~~~~~~~~~~~~C~w~gv~C~~~~v~~l~L~~~~l~G~---ip~------ 136 (721)
++.+.++|+.||++||+++. ||. .+++|+.. .+||+|.||+|+.++|+.|+|+++++.|. +|+
T Consensus 6 ~~~~~~~~~~all~~k~~~~-~~~-~l~~W~~~------~~~C~w~gv~C~~~~v~~L~L~~~~l~g~~~~l~~~l~~L~ 77 (768)
T 3rgz_A 6 PSQSLYREIHQLISFKDVLP-DKN-LLPDWSSN------KNPCTFDGVTCRDDKVTSIDLSSKPLNVGFSAVSSSLLSLT 77 (768)
T ss_dssp --CCHHHHHHHHHHHHTTCS-CTT-SSTTCCTT------SCGGGSTTEEEETTEEEEEECTTSCCCEEHHHHHHHTTTCT
T ss_pred cccCCHHHHHHHHHHHhhCC-Ccc-cccCCCCC------CCCcCCcceEECCCcEEEEECCCCCcCCccCccChhHhccC
Confidence 34456789999999999986 787 89999743 47999999999989999999999999998 665
Q ss_pred -----------------hhcCCCCCCEEEccCCcccccCch--hhcCCCCCCEeEcccCcccccCCccc-cCCCCCCEEE
Q 004979 137 -----------------ELGQLSELKSIILRNNSFFGTIPK--EIGELKELEILDLGFNNFSGPFPSDF-GNSFSLTTLL 196 (721)
Q Consensus 137 -----------------~l~~l~~L~~L~L~~n~l~G~ip~--~l~~l~~L~~l~ls~N~l~G~iP~~~-~~~~~L~~l~ 196 (721)
.++++++|++|||++|.++|.+|. .+++|++|++|||++|.++|.+|..+ .++++|++|+
T Consensus 78 ~L~~l~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~ 157 (768)
T 3rgz_A 78 GLESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLD 157 (768)
T ss_dssp TCCEEECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEE
T ss_pred cccccCCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEE
Confidence 556667777777777777777777 77777777777777777777777665 6777777777
Q ss_pred CccCCCCcCCChh---ccCCCCCCEEEccCCCCCCcccc
Q 004979 197 LDNNQYLGGISPE---LHVLKVISEIQVDESWLTNAASR 232 (721)
Q Consensus 197 l~~N~~~G~iP~~---~~~l~~L~~l~l~~n~~~g~~p~ 232 (721)
|++|+++|.+|.. +.++++|++|+|++|.++|.+|.
T Consensus 158 Ls~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~ 196 (768)
T 3rgz_A 158 LSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDV 196 (768)
T ss_dssp CCSSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBC
T ss_pred CCCCccCCcCChhhhhhccCCCCCEEECCCCcccccCCc
Confidence 7777777777665 56666666666666666665544
No 256
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.83 E-value=1.1e-20 Score=224.57 Aligned_cols=157 Identities=21% Similarity=0.267 Sum_probs=140.3
Q ss_pred ChHHHHHHHHHHHhcccCCCCCCCCCCCCCCCCCCCCC--Cce------------eeEEeC-CCcEEEEEeCCCCCCCcC
Q 004979 70 LNSEGMALLRFRERVVRDPFGALSKWSDNDGVGDNVNP--CSW------------FGVECS-DGKVVILNLRDLCLGGML 134 (721)
Q Consensus 70 ~~~~~~~ll~~k~~~~~~~~~~l~~W~~~~~~~~~~~~--C~w------------~gv~C~-~~~v~~l~L~~~~l~G~i 134 (721)
...|..||++||+++. +| +|+.++.+.. .+| |.| .||+|+ .++|+.|+|++++|.|.+
T Consensus 267 ~~~d~~ALl~~k~~l~-~~-----~W~~~~~~~~-~~~~~C~W~~~~~~~~w~~~~GV~C~~~~~V~~L~Ls~~~L~G~i 339 (876)
T 4ecn_A 267 YIKDYKALKAIWEALD-GK-----NWRYYSGTIN-NTIHSLNWNFNKELDMWGDQPGVDLDNNGRVTGLSLAGFGAKGRV 339 (876)
T ss_dssp HHHHHHHHHHHHHHTT-GG-----GCCCCCSSCS-SCCCCCSCCCSSCGGGTTCCTTEEECTTSCEEEEECTTTCCEEEE
T ss_pred chHHHHHHHHHHHHcC-CC-----CCCcCCCccc-ccCCccccccccccccccCcCceEecCCCCEEEEECccCCCCCcC
Confidence 3579999999999984 44 8976542211 345 999 999998 589999999999999999
Q ss_pred chhhcCCCCCCEEEc-cCCccccc--------------------------------------------------------
Q 004979 135 APELGQLSELKSIIL-RNNSFFGT-------------------------------------------------------- 157 (721)
Q Consensus 135 p~~l~~l~~L~~L~L-~~n~l~G~-------------------------------------------------------- 157 (721)
|++|++|++|++|+| ++|.++|.
T Consensus 340 p~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i~~ 419 (876)
T 4ecn_A 340 PDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKK 419 (876)
T ss_dssp CGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCCCC
T ss_pred chHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCcccccccc
Confidence 999999999999999 88877766
Q ss_pred --------------------CchhhcCCCCCCEeEcccCcccc-----------------cCCcccc--CCCCCCEEECc
Q 004979 158 --------------------IPKEIGELKELEILDLGFNNFSG-----------------PFPSDFG--NSFSLTTLLLD 198 (721)
Q Consensus 158 --------------------ip~~l~~l~~L~~l~ls~N~l~G-----------------~iP~~~~--~~~~L~~l~l~ 198 (721)
||..++++++|+.|+|++|+|+| .||..++ ++++|++|+|+
T Consensus 420 ~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls 499 (876)
T 4ecn_A 420 DSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELY 499 (876)
T ss_dssp CCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEE
T ss_pred ccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECc
Confidence 89999999999999999999999 5999998 99999999999
Q ss_pred cCCCCcCCChhccCCCCCCEEEccCCC-CCC-ccccc
Q 004979 199 NNQYLGGISPELHVLKVISEIQVDESW-LTN-AASRA 233 (721)
Q Consensus 199 ~N~~~G~iP~~~~~l~~L~~l~l~~n~-~~g-~~p~~ 233 (721)
+|++.|.+|..++++++|+.|+|++|. ++| .+|..
T Consensus 500 ~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~ 536 (876)
T 4ecn_A 500 NCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKAD 536 (876)
T ss_dssp SCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHH
T ss_pred CCCCCccChHHHhCCCCCCEEECcCCCCcccccchHH
Confidence 999999999999999999999999998 999 88863
No 257
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.82 E-value=1.3e-20 Score=218.98 Aligned_cols=156 Identities=21% Similarity=0.265 Sum_probs=137.1
Q ss_pred hHHHHHHHHHHHhcccCC-------CCCCCCCCCCCCCCCCCCCCce---eeEEeC-CCcEEEEEeCCCCCCCcCchhhc
Q 004979 71 NSEGMALLRFRERVVRDP-------FGALSKWSDNDGVGDNVNPCSW---FGVECS-DGKVVILNLRDLCLGGMLAPELG 139 (721)
Q Consensus 71 ~~~~~~ll~~k~~~~~~~-------~~~l~~W~~~~~~~~~~~~C~w---~gv~C~-~~~v~~l~L~~~~l~G~ip~~l~ 139 (721)
..|..||.+++.++..+. .....+|+. +.+||.| .||+|+ .++|+.|+|++++++|.+|++++
T Consensus 29 ~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~------~~~~c~w~~~~GV~C~~~~~V~~L~L~~~~l~g~lp~~l~ 102 (636)
T 4eco_A 29 IKDYLALKEIWDALNGKNWSQQGFGTQPGANWNF------NKELDMWGAQPGVSLNSNGRVTGLSLEGFGASGRVPDAIG 102 (636)
T ss_dssp HHHHHHHHHHHHHTTGGGCCCCC------CCCCC------SSCGGGTTCCTTEEECTTCCEEEEECTTSCCEEEECGGGG
T ss_pred HHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCC------CCCcccccCCCCeEEcCCCCEEEEEecCcccCCcCChHHh
Confidence 468999999999875321 111235653 3589999 999997 47999999999999999999999
Q ss_pred CCCCCCEEEccCC-------------------------------------------------------------------
Q 004979 140 QLSELKSIILRNN------------------------------------------------------------------- 152 (721)
Q Consensus 140 ~l~~L~~L~L~~n------------------------------------------------------------------- 152 (721)
+|++|++|+|++|
T Consensus 103 ~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~ 182 (636)
T 4eco_A 103 QLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRIT 182 (636)
T ss_dssp GCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCC
T ss_pred cCccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccc
Confidence 9999999999988
Q ss_pred -----------cccccCchhhcCCCCCCEeEcccCccccc-----------------CCcccc--CCCCCCEEECccCCC
Q 004979 153 -----------SFFGTIPKEIGELKELEILDLGFNNFSGP-----------------FPSDFG--NSFSLTTLLLDNNQY 202 (721)
Q Consensus 153 -----------~l~G~ip~~l~~l~~L~~l~ls~N~l~G~-----------------iP~~~~--~~~~L~~l~l~~N~~ 202 (721)
+|+| ||..++++++|++|+|++|+|+|. +|..++ ++++|++|+|++|++
T Consensus 183 l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l 261 (636)
T 4eco_A 183 LKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPN 261 (636)
T ss_dssp CCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTT
T ss_pred hhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcC
Confidence 4556 999999999999999999999997 999999 999999999999999
Q ss_pred CcCCChhccCCCCCCEEEccCCC-CCC-ccccc
Q 004979 203 LGGISPELHVLKVISEIQVDESW-LTN-AASRA 233 (721)
Q Consensus 203 ~G~iP~~~~~l~~L~~l~l~~n~-~~g-~~p~~ 233 (721)
+|.+|..++++++|++|+|++|. ++| .+|..
T Consensus 262 ~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~ 294 (636)
T 4eco_A 262 LTKLPTFLKALPEMQLINVACNRGISGEQLKDD 294 (636)
T ss_dssp CSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHH
T ss_pred CccChHHHhcCCCCCEEECcCCCCCccccchHH
Confidence 99999999999999999999998 999 88863
No 258
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.74 E-value=4.4e-19 Score=188.97 Aligned_cols=159 Identities=17% Similarity=0.226 Sum_probs=140.9
Q ss_pred CChHHHHHHHHHHHhcccCCCCCCCCCCCCCCCCCCCCCCceeeEEeC----------CCcEEEEEeCCCCCCCcCchhh
Q 004979 69 CLNSEGMALLRFRERVVRDPFGALSKWSDNDGVGDNVNPCSWFGVECS----------DGKVVILNLRDLCLGGMLAPEL 138 (721)
Q Consensus 69 ~~~~~~~~ll~~k~~~~~~~~~~l~~W~~~~~~~~~~~~C~w~gv~C~----------~~~v~~l~L~~~~l~G~ip~~l 138 (721)
+..++..||++||..+..|+.+.+++|.... ....++|.|.|+.|. ..+|+.|+|++|.+. .+|+.+
T Consensus 24 ~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~--~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~l 100 (328)
T 4fcg_A 24 ALRPYHDVLSQWQRHYNADRNRWHSAWRQAN--SNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQA 100 (328)
T ss_dssp CCCCHHHHHHHHHHHHHHCCTTHHHHHHHHT--TTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSCG
T ss_pred cCchHHHHHHHHHHhccCCchhhhhhhcccc--cccccccccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChhh
Confidence 5578999999999988778877778894211 012578999999994 268999999999998 899999
Q ss_pred cCCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccCcccccCCccccCCCCCCEEECccCCCCcCCChhccC------
Q 004979 139 GQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLDNNQYLGGISPELHV------ 212 (721)
Q Consensus 139 ~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N~l~G~iP~~~~~~~~L~~l~l~~N~~~G~iP~~~~~------ 212 (721)
+++++|++|+|++|.++ .+|..++++++|++|+|++|+++ .||..++++++|++|+|++|++.|.+|..++.
T Consensus 101 ~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~ 178 (328)
T 4fcg_A 101 FRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGE 178 (328)
T ss_dssp GGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCC
T ss_pred hhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhh
Confidence 99999999999999999 99999999999999999999999 99999999999999999999999999998765
Q ss_pred ---CCCCCEEEccCCCCCCccccc
Q 004979 213 ---LKVISEIQVDESWLTNAASRA 233 (721)
Q Consensus 213 ---l~~L~~l~l~~n~~~g~~p~~ 233 (721)
+++|++|+|++|.++ .+|..
T Consensus 179 ~~~l~~L~~L~L~~n~l~-~lp~~ 201 (328)
T 4fcg_A 179 HQGLVNLQSLRLEWTGIR-SLPAS 201 (328)
T ss_dssp EEESTTCCEEEEEEECCC-CCCGG
T ss_pred hccCCCCCEEECcCCCcC-cchHh
Confidence 999999999999999 77764
No 259
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.74 E-value=2.7e-18 Score=176.43 Aligned_cols=141 Identities=13% Similarity=0.114 Sum_probs=104.8
Q ss_pred hhhhCcCCCCceeEEEEEEe-cCCcE--EEEEEeeeccccch-------------------hhHHHHHHHHHHHHHhcCC
Q 004979 429 SNIIGSFSDGTVGTVYKGTL-SSGVE--IAVTSTSVKSRADW-------------------SKNLESQFRKKIDTLSKVN 486 (721)
Q Consensus 429 ~~ii~~lg~G~~g~Vyk~~~-~~~~~--vavk~~~~~~~~~~-------------------~~~~~~~f~~Ei~~l~~l~ 486 (721)
+++.+.+|+|+||.||+|.. .+|.. ||||+......... .......+.+|+++|.+++
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 35667899999999999997 67888 99998653211100 1122346889999999998
Q ss_pred CCcc--ceEeEEEecCCCceEEEEEecCCC-C----ChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHh-cCCCCeEee
Q 004979 487 HKNF--VNLIGYCEEDEPFTRMMVFEYSPN-G----SLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMH-QLTPPIAHR 558 (721)
Q Consensus 487 H~nI--v~l~g~~~~~~~~~~~lV~Ey~~~-G----sL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH-~~~~~IvHr 558 (721)
|++| ..++++ . ..+|||||+.+ | +|.++... .++.....++.|++.||.||| +++ |+||
T Consensus 129 ~~~i~~p~~~~~--~----~~~lVmE~~g~~g~~~~~L~~~~~~-----~~~~~~~~i~~qi~~~l~~lH~~~g--ivHr 195 (258)
T 1zth_A 129 EAGVSVPQPYTY--M----KNVLLMEFIGEDELPAPTLVELGRE-----LKELDVEGIFNDVVENVKRLYQEAE--LVHA 195 (258)
T ss_dssp HTTCCCCCEEEE--E----TTEEEEECCEETTEECCBHHHHGGG-----GGGSCHHHHHHHHHHHHHHHHHTSC--EECS
T ss_pred hCCCCCCeEEEc--C----CCEEEEEecCCCCCccccHHHHhhc-----cChHHHHHHHHHHHHHHHHHHHHCC--EEeC
Confidence 8864 334432 1 34899999942 4 56655421 223456789999999999999 888 9999
Q ss_pred CCCCCCeEeCCCCcEEEeccCCCCCC
Q 004979 559 NLQSSSIYLTEDYAAKISDFSFWNNT 584 (721)
Q Consensus 559 DLKp~NILl~~~~~~kL~DFGla~~~ 584 (721)
||||+|||+++ .++|+|||++...
T Consensus 196 Dlkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 196 DLSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp SCSTTSEEESS--SEEECCCTTCEET
T ss_pred CCCHHHEEEcC--cEEEEECcccccC
Confidence 99999999998 9999999998654
No 260
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.60 E-value=2e-15 Score=147.71 Aligned_cols=125 Identities=22% Similarity=0.259 Sum_probs=114.6
Q ss_pred CceeeEEeCC-----------CcEEEEEeCCCCCCCcCch-hhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEccc
Q 004979 108 CSWFGVECSD-----------GKVVILNLRDLCLGGMLAP-ELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGF 175 (721)
Q Consensus 108 C~w~gv~C~~-----------~~v~~l~L~~~~l~G~ip~-~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~ 175 (721)
|.|..+.|.. ..++.|+|++|.+++..+. .++.+++|++|+|++|.+++.+|..+.++++|+.|+|++
T Consensus 8 C~~~~l~~s~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 8 CEGTTVDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp EETTEEECTTSCCSSCCSCCCTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred ECCCEEEcCCCCcCcCccCCCCCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 7899999963 2678999999999877665 389999999999999999999999999999999999999
Q ss_pred CcccccCCccccCCCCCCEEECccCCCCcCCChhccCCCCCCEEEccCCCCCCcccc
Q 004979 176 NNFSGPFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLTNAASR 232 (721)
Q Consensus 176 N~l~G~iP~~~~~~~~L~~l~l~~N~~~G~iP~~~~~l~~L~~l~l~~n~~~g~~p~ 232 (721)
|++++..|..+.++++|++|+|++|+++|.+|..+..+++|++|+|++|.|++..+.
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l 144 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHL 144 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGG
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcc
Confidence 999998888899999999999999999999999999999999999999999987653
No 261
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.58 E-value=1.1e-15 Score=163.66 Aligned_cols=141 Identities=9% Similarity=0.071 Sum_probs=99.5
Q ss_pred hhhhhCcCCCCceeEEEEEEecCCcEEEEEEeeecccc--------c---------hhhHHHHHHHHHHHHHhcCCCCcc
Q 004979 428 FSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRA--------D---------WSKNLESQFRKKIDTLSKVNHKNF 490 (721)
Q Consensus 428 ~~~ii~~lg~G~~g~Vyk~~~~~~~~vavk~~~~~~~~--------~---------~~~~~~~~f~~Ei~~l~~l~H~nI 490 (721)
.|.+.+.||.|+||.||+|...+|+.||||+++..... + +.........+|...|.++.+.++
T Consensus 96 iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv 175 (397)
T 4gyi_A 96 VYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGF 175 (397)
T ss_dssp CSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 35778899999999999999989999999987532110 0 000111123456777777755544
Q ss_pred ceEeEEEecCCCceEEEEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEeCCC
Q 004979 491 VNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTED 570 (721)
Q Consensus 491 v~l~g~~~~~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl~~~ 570 (721)
.-..-+... ..+|||||++++.|.++... .....++.|++.+|.|||+++ ||||||||.|||++++
T Consensus 176 ~vp~p~~~~----~~~LVME~i~G~~L~~l~~~--------~~~~~l~~qll~~l~~lH~~g--IVHrDLKp~NILl~~d 241 (397)
T 4gyi_A 176 PVPEPIAQS----RHTIVMSLVDALPMRQVSSV--------PDPASLYADLIALILRLAKHG--LIHGDFNEFNILIREE 241 (397)
T ss_dssp SCCCEEEEE----TTEEEEECCSCEEGGGCCCC--------SCHHHHHHHHHHHHHHHHHTT--EECSCCSTTSEEEEEE
T ss_pred CCCeeeecc----CceEEEEecCCccHhhhccc--------HHHHHHHHHHHHHHHHHHHCC--CcCCCCCHHHEEEeCC
Confidence 222112222 12799999999888765421 123568899999999999998 9999999999999887
Q ss_pred C----------cEEEeccCCCC
Q 004979 571 Y----------AAKISDFSFWN 582 (721)
Q Consensus 571 ~----------~~kL~DFGla~ 582 (721)
+ .+.|+||+-+-
T Consensus 242 gd~~d~~~~~~~~~iID~~Q~V 263 (397)
T 4gyi_A 242 KDAEDPSSITLTPIIIXFPQMV 263 (397)
T ss_dssp ECSSCTTSEEEEEEECCCTTCE
T ss_pred CCcccccccccceEEEEeCCcc
Confidence 6 38999999654
No 262
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.57 E-value=1e-14 Score=146.74 Aligned_cols=125 Identities=22% Similarity=0.286 Sum_probs=111.4
Q ss_pred CCCCceeeEEeCC-----------CcEEEEEeCCCCCCCcCchhhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEc
Q 004979 105 VNPCSWFGVECSD-----------GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDL 173 (721)
Q Consensus 105 ~~~C~w~gv~C~~-----------~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~l 173 (721)
...|+|.+|.|.. ..++.|+|++|.+.+..|..+..+++|++|+|++|.+.+..+..+..+++|+.|+|
T Consensus 16 ~~~Cs~~~v~c~~~~l~~ip~~~~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~L 95 (229)
T 3e6j_A 16 QCSCSGTTVDCRSKRHASVPAGIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDL 95 (229)
T ss_dssp TCEEETTEEECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCEEeCCEeEccCCCcCccCCCCCCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEEC
Confidence 3679999999963 25789999999999988989999999999999999996544456789999999999
Q ss_pred ccCcccccCCccccCCCCCCEEECccCCCCcCCChhccCCCCCCEEEccCCCCCCcc
Q 004979 174 GFNNFSGPFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLTNAA 230 (721)
Q Consensus 174 s~N~l~G~iP~~~~~~~~L~~l~l~~N~~~G~iP~~~~~l~~L~~l~l~~n~~~g~~ 230 (721)
++|++++..+..+..+++|++|+|++|+++ .||..+..+++|++|+|++|.+++-.
T Consensus 96 s~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~ 151 (229)
T 3e6j_A 96 GTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIP 151 (229)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCC
T ss_pred CCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccC
Confidence 999999766666889999999999999999 89999999999999999999999643
No 263
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.56 E-value=1.3e-15 Score=180.88 Aligned_cols=111 Identities=29% Similarity=0.472 Sum_probs=105.9
Q ss_pred EEeCCCCCCCcCchhhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccCcccccCCccccCCCCCCEEECccCCC
Q 004979 123 LNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLDNNQY 202 (721)
Q Consensus 123 l~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N~l~G~iP~~~~~~~~L~~l~l~~N~~ 202 (721)
+++..+.+.|.+|+.++++++|+.|||++|.|+|.||.++++++.|+.|||++|+|+|.||..++++++|++|||++|++
T Consensus 613 ~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l 692 (768)
T 3rgz_A 613 CNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKL 692 (768)
T ss_dssp SCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCC
T ss_pred cccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcc
Confidence 35566788899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcCCChhccCCCCCCEEEccCCCCCCccccc
Q 004979 203 LGGISPELHVLKVISEIQVDESWLTNAASRA 233 (721)
Q Consensus 203 ~G~iP~~~~~l~~L~~l~l~~n~~~g~~p~~ 233 (721)
+|.||..++.++.|++|+|++|+|+|.||..
T Consensus 693 ~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~ 723 (768)
T 3rgz_A 693 DGRIPQAMSALTMLTEIDLSNNNLSGPIPEM 723 (768)
T ss_dssp EECCCGGGGGCCCCSEEECCSSEEEEECCSS
T ss_pred cCcCChHHhCCCCCCEEECcCCcccccCCCc
Confidence 9999999999999999999999999999963
No 264
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.54 E-value=2.5e-14 Score=137.71 Aligned_cols=125 Identities=21% Similarity=0.215 Sum_probs=108.2
Q ss_pred CceeeEEeCC-----------CcEEEEEeCCCCCCCcCchhhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccC
Q 004979 108 CSWFGVECSD-----------GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFN 176 (721)
Q Consensus 108 C~w~gv~C~~-----------~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N 176 (721)
|+|.++.|.. ..++.|+|++|.+.+..+..+..+++|++|+|++|.+++..+..++.+++|+.|+|++|
T Consensus 7 C~~~~l~~~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 86 (177)
T 2o6r_A 7 CSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHEN 86 (177)
T ss_dssp EETTEEECCSSCCSSCCTTCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred eCCCEEEecCCCCccCCCCCCCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCC
Confidence 7899999963 25789999999999766666899999999999999999766666899999999999999
Q ss_pred cccccCCccccCCCCCCEEECccCCCCcCCChhccCCCCCCEEEccCCCCCCcccc
Q 004979 177 NFSGPFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLTNAASR 232 (721)
Q Consensus 177 ~l~G~iP~~~~~~~~L~~l~l~~N~~~G~iP~~~~~l~~L~~l~l~~n~~~g~~p~ 232 (721)
++++..|..+..+++|++|+|++|++++-.+..+..+++|+.|+|++|.+++..|.
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 142 (177)
T 2o6r_A 87 KLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 142 (177)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred CccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCcc
Confidence 99977667789999999999999999854444468899999999999999987763
No 265
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.50 E-value=1.1e-14 Score=153.98 Aligned_cols=116 Identities=21% Similarity=0.399 Sum_probs=110.6
Q ss_pred CcEEEEEeCC-CCCCCcCchhhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccCcccccCCccccCCCCCCEEE
Q 004979 118 GKVVILNLRD-LCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLL 196 (721)
Q Consensus 118 ~~v~~l~L~~-~~l~G~ip~~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N~l~G~iP~~~~~~~~L~~l~ 196 (721)
.++..|+|++ |.+.|.+|..++++++|++|+|++|.++|.+|..++++++|++|+|++|.++|.+|..++++++|++|+
T Consensus 76 ~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 155 (313)
T 1ogq_A 76 PYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGIT 155 (313)
T ss_dssp TTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEE
T ss_pred CCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEE
Confidence 4678999995 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCCCcCCChhccCCC-CCCEEEccCCCCCCccccc
Q 004979 197 LDNNQYLGGISPELHVLK-VISEIQVDESWLTNAASRA 233 (721)
Q Consensus 197 l~~N~~~G~iP~~~~~l~-~L~~l~l~~n~~~g~~p~~ 233 (721)
|++|.++|.+|..++.+. +|+.|+|++|.++|.+|..
T Consensus 156 L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~ 193 (313)
T 1ogq_A 156 FDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPT 193 (313)
T ss_dssp CCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGG
T ss_pred CcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChH
Confidence 999999999999999998 9999999999999988864
No 266
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.50 E-value=8.6e-14 Score=137.59 Aligned_cols=125 Identities=20% Similarity=0.254 Sum_probs=108.3
Q ss_pred CCceeeEEeCC-----------CcEEEEEeCCCCCCCcCchhhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEccc
Q 004979 107 PCSWFGVECSD-----------GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGF 175 (721)
Q Consensus 107 ~C~w~gv~C~~-----------~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~ 175 (721)
.|.|.+|.|.. .+++.|+|++|.+.+..+..+..+++|++|+|++|.+++..+..+..+++|++|+|++
T Consensus 6 ~C~~~~v~c~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~ 85 (208)
T 2o6s_A 6 SCSGTTVECYSQGRTSVPTGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLST 85 (208)
T ss_dssp EEETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred EECCCEEEecCCCccCCCCCCCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCC
Confidence 37899999963 2588999999999976666688999999999999999966566678999999999999
Q ss_pred CcccccCCccccCCCCCCEEECccCCCCcCCChhccCCCCCCEEEccCCCCCCccc
Q 004979 176 NNFSGPFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLTNAAS 231 (721)
Q Consensus 176 N~l~G~iP~~~~~~~~L~~l~l~~N~~~G~iP~~~~~l~~L~~l~l~~n~~~g~~p 231 (721)
|++++..+..+.++++|++|+|++|++++-.+..+..+++|+.|+|++|.+++..+
T Consensus 86 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 141 (208)
T 2o6s_A 86 NQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPD 141 (208)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred CcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCH
Confidence 99997666668999999999999999997666668999999999999999996433
No 267
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.49 E-value=6.7e-14 Score=139.92 Aligned_cols=125 Identities=19% Similarity=0.168 Sum_probs=112.0
Q ss_pred CceeeEEeCCC-----------cEEEEEeCCCCCCCcCch-hhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEccc
Q 004979 108 CSWFGVECSDG-----------KVVILNLRDLCLGGMLAP-ELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGF 175 (721)
Q Consensus 108 C~w~gv~C~~~-----------~v~~l~L~~~~l~G~ip~-~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~ 175 (721)
|.|..+.|... .++.|+|++|.+++..+. .+..+++|++|+|++|.+++..|..+..+++|+.|+|++
T Consensus 11 C~~~~l~~s~n~l~~iP~~~~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 11 CEGTTVDCSNQKLNKIPEHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp EETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred ECCCEeEeCCCCcccCccCCCCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 78999999632 467899999999988664 478999999999999999988888899999999999999
Q ss_pred CcccccCCccccCCCCCCEEECccCCCCcCCChhccCCCCCCEEEccCCCCCCcccc
Q 004979 176 NNFSGPFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLTNAASR 232 (721)
Q Consensus 176 N~l~G~iP~~~~~~~~L~~l~l~~N~~~G~iP~~~~~l~~L~~l~l~~n~~~g~~p~ 232 (721)
|++++..|..+.++++|++|+|++|++++-.|..+..+++|+.|+|++|.+++..|.
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 147 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPG 147 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTT
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHH
Confidence 999988788899999999999999999999999999999999999999999986664
No 268
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.48 E-value=1.1e-13 Score=138.39 Aligned_cols=124 Identities=23% Similarity=0.226 Sum_probs=111.2
Q ss_pred CceeeEEeCC-----------CcEEEEEeCCCCCCCcCchhhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccC
Q 004979 108 CSWFGVECSD-----------GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFN 176 (721)
Q Consensus 108 C~w~gv~C~~-----------~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N 176 (721)
|.|..|.|.. ..++.|+|++|.+.+..+..+..+++|++|+|++|.+++..|..+..+++|++|+|++|
T Consensus 11 C~~~~v~c~~~~l~~iP~~l~~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 11 CSNNIVDCRGKGLTEIPTNLPETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp EETTEEECTTSCCSSCCSSCCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred ECCCEEEcCCCCcCcCCCccCcCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 7899999963 25789999999999877778999999999999999999999999999999999999999
Q ss_pred cccccCCccccCCCCCCEEECccCCCCcCCChhccCCCCCCEEEccCCCCCCccc
Q 004979 177 NFSGPFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLTNAAS 231 (721)
Q Consensus 177 ~l~G~iP~~~~~~~~L~~l~l~~N~~~G~iP~~~~~l~~L~~l~l~~n~~~g~~p 231 (721)
++++-.+..+.++++|++|+|++|++++-.|..+..+++|+.|+|++|.+++..+
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 145 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAK 145 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECH
Confidence 9995434446889999999999999999989999999999999999999997544
No 269
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.46 E-value=1.2e-13 Score=146.99 Aligned_cols=114 Identities=17% Similarity=0.142 Sum_probs=86.5
Q ss_pred CcEEEEEeCCCCCCCcCchhhcC---------CCCCCEEEccCCcccccCchhhcCCCCCCEeEcccCcccccCCccccC
Q 004979 118 GKVVILNLRDLCLGGMLAPELGQ---------LSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGN 188 (721)
Q Consensus 118 ~~v~~l~L~~~~l~G~ip~~l~~---------l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N~l~G~iP~~~~~ 188 (721)
.++..|+|++|++.|.+|..++. +++|++|+|++|.++ .+|..++++++|+.|+|++|++++ +|+.++.
T Consensus 150 ~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~ 227 (328)
T 4fcg_A 150 NRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHH 227 (328)
T ss_dssp TTCCEEEEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGG
T ss_pred cCCCEEECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-Cchhhcc
Confidence 36777788887777777776654 777778888777777 777777777777777777777774 6667777
Q ss_pred CCCCCEEECccCCCCcCCChhccCCCCCCEEEccCCCCCCccccc
Q 004979 189 SFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLTNAASRA 233 (721)
Q Consensus 189 ~~~L~~l~l~~N~~~G~iP~~~~~l~~L~~l~l~~n~~~g~~p~~ 233 (721)
+++|++|+|++|++.|.+|..++.+++|+.|+|++|.+.+.+|..
T Consensus 228 l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~ 272 (328)
T 4fcg_A 228 LPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLD 272 (328)
T ss_dssp CTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTT
T ss_pred CCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchh
Confidence 777777777777777777777777777777777777777777753
No 270
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.45 E-value=2.1e-13 Score=139.10 Aligned_cols=109 Identities=21% Similarity=0.203 Sum_probs=72.4
Q ss_pred EEEEEeCCCCCCCcCchhhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccCcccccCCccccCCCCCCEEECcc
Q 004979 120 VVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLDN 199 (721)
Q Consensus 120 v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N~l~G~iP~~~~~~~~L~~l~l~~ 199 (721)
+..|+|++|.+.+..+..+..+++|++|+|++|.+++..|..+..+++|+.|+|++|++++..|..+..+++|++|+|++
T Consensus 37 l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 116 (251)
T 3m19_A 37 TEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGG 116 (251)
T ss_dssp CCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCC
Confidence 45666666666666666666677777777777777666666666677777777777777655555566667777777777
Q ss_pred CCCCcCCChhccCCCCCCEEEccCCCCCC
Q 004979 200 NQYLGGISPELHVLKVISEIQVDESWLTN 228 (721)
Q Consensus 200 N~~~G~iP~~~~~l~~L~~l~l~~n~~~g 228 (721)
|++++-.+..+..+++|+.|+|++|.+++
T Consensus 117 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 145 (251)
T 3m19_A 117 NQLKSLPSGVFDRLTKLKELRLNTNQLQS 145 (251)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCC
T ss_pred CcCCCcChhHhccCCcccEEECcCCcCCc
Confidence 77665444445666777777777776664
No 271
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.44 E-value=2.5e-13 Score=135.74 Aligned_cols=114 Identities=17% Similarity=0.108 Sum_probs=107.8
Q ss_pred CcEEEEEeCCCCCCCcCchhhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccCcccccCCccccCCCCCCEEEC
Q 004979 118 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 197 (721)
Q Consensus 118 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N~l~G~iP~~~~~~~~L~~l~l 197 (721)
.++..|+|++|.+++..+..+..+++|++|+|++|.+++..|..+..+++|+.|+|++|++++..|..+.++++|++|+|
T Consensus 57 ~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 136 (220)
T 2v70_A 57 PQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSL 136 (220)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEEC
T ss_pred CCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEEC
Confidence 57899999999999887778999999999999999999888888999999999999999999999999999999999999
Q ss_pred ccCCCCcCCChhccCCCCCCEEEccCCCCCCccc
Q 004979 198 DNNQYLGGISPELHVLKVISEIQVDESWLTNAAS 231 (721)
Q Consensus 198 ~~N~~~G~iP~~~~~l~~L~~l~l~~n~~~g~~p 231 (721)
++|++++-.|..+..+++|+.|+|++|.+++..+
T Consensus 137 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 137 YDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp TTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred CCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 9999999999999999999999999999998654
No 272
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.44 E-value=3.4e-13 Score=131.88 Aligned_cols=121 Identities=23% Similarity=0.224 Sum_probs=100.9
Q ss_pred CceeeEEeCC-----------CcEEEEEeCCCCCCCcCchhhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccC
Q 004979 108 CSWFGVECSD-----------GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFN 176 (721)
Q Consensus 108 C~w~gv~C~~-----------~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N 176 (721)
|.|..+.|.. ..++.|+|++|.++ .+|..+.++++|+.|+|++|.+++..|..+..+++|+.|+|++|
T Consensus 10 C~~~~l~~~~~~l~~ip~~~~~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 10 CLDTVVRCSNKGLKVLPKGIPRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp EETTEEECTTSCCSSCCSCCCTTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred eCCCEEEcCCCCCCcCCCCCCCCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 6788888853 25778899999887 67888888999999999999998877778888999999999999
Q ss_pred cccccCCccccCCCCCCEEECccCCCCcCCChhccCCCCCCEEEccCCCCCCc
Q 004979 177 NFSGPFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLTNA 229 (721)
Q Consensus 177 ~l~G~iP~~~~~~~~L~~l~l~~N~~~G~iP~~~~~l~~L~~l~l~~n~~~g~ 229 (721)
++++..|..+.++++|++|+|++|++++-.+..+..+++|+.|+|++|.++..
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~ 141 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCD 141 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecC
Confidence 99987777888899999999999998865445678889999999999988754
No 273
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.43 E-value=8e-14 Score=163.82 Aligned_cols=106 Identities=24% Similarity=0.351 Sum_probs=50.9
Q ss_pred EEEeCCCCCCCcCchhhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccCcccccCCccccCCCCCCEEECccCC
Q 004979 122 ILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLDNNQ 201 (721)
Q Consensus 122 ~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N~l~G~iP~~~~~~~~L~~l~l~~N~ 201 (721)
.|+|++|.+. .||+.++.|++|++|+|++|.|+ .||..+++|++|++|||++|+|+ .||..+++|++|++|+|++|.
T Consensus 228 ~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~ 304 (727)
T 4b8c_D 228 ALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNM 304 (727)
T ss_dssp EEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSC
T ss_pred EEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCC
Confidence 3444444443 34444444444445555544444 44444444445555555555444 444444444445555554444
Q ss_pred CCcCCChhccCCCCCCEEEccCCCCCCccc
Q 004979 202 YLGGISPELHVLKVISEIQVDESWLTNAAS 231 (721)
Q Consensus 202 ~~G~iP~~~~~l~~L~~l~l~~n~~~g~~p 231 (721)
++ .||..++.+++|+.|+|++|.|+|.+|
T Consensus 305 l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p 333 (727)
T 4b8c_D 305 VT-TLPWEFGNLCNLQFLGVEGNPLEKQFL 333 (727)
T ss_dssp CC-CCCSSTTSCTTCCCEECTTSCCCSHHH
T ss_pred CC-ccChhhhcCCCccEEeCCCCccCCCCh
Confidence 43 444444444455555555555444444
No 274
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.41 E-value=1.2e-13 Score=128.95 Aligned_cols=112 Identities=21% Similarity=0.183 Sum_probs=102.2
Q ss_pred CcEEEEEeCCCCCC-CcCchhhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccCcccccCCccccCCCCCCEEE
Q 004979 118 GKVVILNLRDLCLG-GMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLL 196 (721)
Q Consensus 118 ~~v~~l~L~~~~l~-G~ip~~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N~l~G~iP~~~~~~~~L~~l~ 196 (721)
.+++.|+|++|.+. |.+|..+..+++|++|+|++|.+++. ..++.+++|++|+|++|.+++.+|..+..+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 46889999999999 89999899999999999999999976 7889999999999999999998998888899999999
Q ss_pred CccCCCCc-CCChhccCCCCCCEEEccCCCCCCccc
Q 004979 197 LDNNQYLG-GISPELHVLKVISEIQVDESWLTNAAS 231 (721)
Q Consensus 197 l~~N~~~G-~iP~~~~~l~~L~~l~l~~n~~~g~~p 231 (721)
+++|.+++ ..|..+..+++|+.|++++|.+++..+
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 130 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLND 130 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTT
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHH
Confidence 99999988 456889999999999999999987543
No 275
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.40 E-value=2.8e-13 Score=154.22 Aligned_cols=125 Identities=24% Similarity=0.251 Sum_probs=113.8
Q ss_pred CCceeeEEeCC-------------CcEEEEEeCCCCCCCcCchhhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEc
Q 004979 107 PCSWFGVECSD-------------GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDL 173 (721)
Q Consensus 107 ~C~w~gv~C~~-------------~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~l 173 (721)
.|.|.|+ |+. .+++.|+|++|.+++..|..+.++++|++|+|++|.+++..|..++++++|++|||
T Consensus 3 ~C~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L 81 (549)
T 2z81_A 3 SCDASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDL 81 (549)
T ss_dssp EECTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred cCCCCce-EECCCCccccccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEEC
Confidence 4999998 852 26899999999999988889999999999999999999988899999999999999
Q ss_pred ccCcccccCCccccCCCCCCEEECccCCCCc-CCChhccCCCCCCEEEccCCCCCCcccc
Q 004979 174 GFNNFSGPFPSDFGNSFSLTTLLLDNNQYLG-GISPELHVLKVISEIQVDESWLTNAASR 232 (721)
Q Consensus 174 s~N~l~G~iP~~~~~~~~L~~l~l~~N~~~G-~iP~~~~~l~~L~~l~l~~n~~~g~~p~ 232 (721)
++|++++..|..++++++|++|+|++|.+++ .+|..++++++|++|++++|.+.+.+|.
T Consensus 82 s~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~ 141 (549)
T 2z81_A 82 SDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRR 141 (549)
T ss_dssp TTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECT
T ss_pred CCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCH
Confidence 9999998877779999999999999999997 6788899999999999999997777774
No 276
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.38 E-value=6.5e-13 Score=147.40 Aligned_cols=127 Identities=17% Similarity=0.255 Sum_probs=114.5
Q ss_pred CCCceee--EEeCC----------CcEEEEEeCCCCCCCcCchhhcCCCCCCEEEccCCcccccCc-hhhcCCCCCCEeE
Q 004979 106 NPCSWFG--VECSD----------GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIP-KEIGELKELEILD 172 (721)
Q Consensus 106 ~~C~w~g--v~C~~----------~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~l~G~ip-~~l~~l~~L~~l~ 172 (721)
..|.|.+ |.|.. .+++.|+|++|.+.+..|..++++++|++|+|++|.+.+.+| ..+.++++|++|+
T Consensus 6 ~~c~~~~~~~~c~~~~l~~lp~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~ 85 (455)
T 3v47_A 6 SECSVIGYNAICINRGLHQVPELPAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILK 85 (455)
T ss_dssp -CCEEETTEEECCSSCCSSCCCCCTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEE
T ss_pred ceeEEEccccCcCCCCcccCCCCCCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEe
Confidence 4577776 88863 358999999999999889999999999999999999998885 4689999999999
Q ss_pred cccCcccccCCccccCCCCCCEEECccCCCCcCCChh--ccCCCCCCEEEccCCCCCCcccc
Q 004979 173 LGFNNFSGPFPSDFGNSFSLTTLLLDNNQYLGGISPE--LHVLKVISEIQVDESWLTNAASR 232 (721)
Q Consensus 173 ls~N~l~G~iP~~~~~~~~L~~l~l~~N~~~G~iP~~--~~~l~~L~~l~l~~n~~~g~~p~ 232 (721)
|++|++++..|..++++++|++|+|++|+++|.+|.. +..+++|++|+|++|.+++..|.
T Consensus 86 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 147 (455)
T 3v47_A 86 LDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPA 147 (455)
T ss_dssp CTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCC
T ss_pred CCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcc
Confidence 9999999999999999999999999999999988776 89999999999999999987665
No 277
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.37 E-value=2.4e-12 Score=123.10 Aligned_cols=107 Identities=21% Similarity=0.182 Sum_probs=92.9
Q ss_pred EEEeCCCCCCCcCchhhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccCcccccCCccccCCCCCCEEECccCC
Q 004979 122 ILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLDNNQ 201 (721)
Q Consensus 122 ~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N~l~G~iP~~~~~~~~L~~l~l~~N~ 201 (721)
.|+++++.|.. +|..+. +.|++|+|++|.+++..|..++++++|+.|+|++|+|++-.|..+.++++|++|+|++|+
T Consensus 13 ~l~~s~n~l~~-ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~ 89 (170)
T 3g39_A 13 TVDCSGKSLAS-VPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQ 89 (170)
T ss_dssp EEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEeCCCCcCc-cCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCc
Confidence 45566777765 776653 889999999999999989999999999999999999996655667899999999999999
Q ss_pred CCcCCChhccCCCCCCEEEccCCCCCCccc
Q 004979 202 YLGGISPELHVLKVISEIQVDESWLTNAAS 231 (721)
Q Consensus 202 ~~G~iP~~~~~l~~L~~l~l~~n~~~g~~p 231 (721)
+++-.|..+..+++|+.|+|++|.|++..+
T Consensus 90 l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 90 LKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred cCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 998666679999999999999999997654
No 278
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.36 E-value=8e-13 Score=150.72 Aligned_cols=108 Identities=23% Similarity=0.237 Sum_probs=101.7
Q ss_pred cEEEEEeCCCCCCCcCchhhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccCcccccCCccccCCCCCCEEECc
Q 004979 119 KVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLD 198 (721)
Q Consensus 119 ~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N~l~G~iP~~~~~~~~L~~l~l~ 198 (721)
.+..|+|++|.|++ +|. ++.|++|+.|+|++|.|+ .||..++++++|+.|+|++|+|++ || .++++++|++|+|+
T Consensus 442 ~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls 516 (567)
T 1dce_A 442 DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLC 516 (567)
T ss_dssp TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECC
T ss_pred CceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECC
Confidence 46789999999998 776 999999999999999999 999999999999999999999998 88 89999999999999
Q ss_pred cCCCCcCC-ChhccCCCCCCEEEccCCCCCCccc
Q 004979 199 NNQYLGGI-SPELHVLKVISEIQVDESWLTNAAS 231 (721)
Q Consensus 199 ~N~~~G~i-P~~~~~l~~L~~l~l~~n~~~g~~p 231 (721)
+|++++.+ |..++.+++|+.|+|++|.|++..|
T Consensus 517 ~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 550 (567)
T 1dce_A 517 NNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEG 550 (567)
T ss_dssp SSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSS
T ss_pred CCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCcc
Confidence 99999988 9999999999999999999998655
No 279
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.35 E-value=2.5e-12 Score=132.61 Aligned_cols=120 Identities=19% Similarity=0.213 Sum_probs=60.2
Q ss_pred CCCceeeEEeC-CCcEEEEEeCCCCCCCcCchhhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccCcccccCCc
Q 004979 106 NPCSWFGVECS-DGKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPS 184 (721)
Q Consensus 106 ~~C~w~gv~C~-~~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N~l~G~iP~ 184 (721)
+.|.|.|+.|. .+.++.+++++++|.. ||..+. +.|+.|+|++|.+++..+..++++++|++|+|++|+++.-.+.
T Consensus 3 ~~C~~~~~~C~c~~~~~~l~~~~~~l~~-ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~ 79 (270)
T 2o6q_A 3 ALCKKDGGVCSCNNNKNSVDCSSKKLTA-IPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAG 79 (270)
T ss_dssp CCBGGGTCSBEEETTTTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTT
T ss_pred ccCCCCCCCCEeCCCCCEEEccCCCCCc-cCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChh
Confidence 56888887774 2233455555555552 443332 3455555555555543333455555555555555555522222
Q ss_pred cccCCCCCCEEECccCCCCcCCChhccCCCCCCEEEccCCCCCC
Q 004979 185 DFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLTN 228 (721)
Q Consensus 185 ~~~~~~~L~~l~l~~N~~~G~iP~~~~~l~~L~~l~l~~n~~~g 228 (721)
.+.++++|++|+|++|.+++-.+..+..+++|++|+|++|.+++
T Consensus 80 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 123 (270)
T 2o6q_A 80 IFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKS 123 (270)
T ss_dssp TTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCC
T ss_pred hhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCe
Confidence 23445555555555555544333334455555555555555544
No 280
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.35 E-value=2.3e-12 Score=125.84 Aligned_cols=109 Identities=15% Similarity=0.187 Sum_probs=99.2
Q ss_pred EEEEeCCCCCCCcCchhhcCCCCCCEEEccCCcccccCch-hhcCCCCCCEeEcccCcccccCCccccCCCCCCEEECcc
Q 004979 121 VILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPK-EIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLDN 199 (721)
Q Consensus 121 ~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~l~G~ip~-~l~~l~~L~~l~ls~N~l~G~iP~~~~~~~~L~~l~l~~ 199 (721)
..+++++++| +.||..+.. +|++|+|++|.+++..|. .++.+++|++|+|++|++++.+|..+.++++|++|+|++
T Consensus 11 ~~l~~s~~~l-~~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGL-KEIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCC-SSCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCc-CcCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 4789999999 678876654 899999999999877665 489999999999999999999999999999999999999
Q ss_pred CCCCcCCChhccCCCCCCEEEccCCCCCCcccc
Q 004979 200 NQYLGGISPELHVLKVISEIQVDESWLTNAASR 232 (721)
Q Consensus 200 N~~~G~iP~~~~~l~~L~~l~l~~n~~~g~~p~ 232 (721)
|++++..|..+..+++|++|+|++|.+++.+|.
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 120 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPG 120 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTT
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHH
Confidence 999999888899999999999999999987765
No 281
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.35 E-value=3.4e-13 Score=156.47 Aligned_cols=124 Identities=14% Similarity=0.171 Sum_probs=114.1
Q ss_pred CCceeeEEeC---CCcEEEEEeCCCCCCCc-----------------Cchhhc--CCCCCCEEEccCCcccccCchhhcC
Q 004979 107 PCSWFGVECS---DGKVVILNLRDLCLGGM-----------------LAPELG--QLSELKSIILRNNSFFGTIPKEIGE 164 (721)
Q Consensus 107 ~C~w~gv~C~---~~~v~~l~L~~~~l~G~-----------------ip~~l~--~l~~L~~L~L~~n~l~G~ip~~l~~ 164 (721)
++...|+.-. -.++..|+|++|.++|. +|..++ ++++|++|+|++|.+.|.+|..+++
T Consensus 192 ~n~l~~ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~ 271 (636)
T 4eco_A 192 SNNITFVSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKA 271 (636)
T ss_dssp SCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTT
T ss_pred cCCCccCCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhc
Confidence 4567774211 35789999999999997 999999 9999999999999999999999999
Q ss_pred CCCCCEeEcccCc-ccc-cCCccccCC------CCCCEEECccCCCCcCCCh--hccCCCCCCEEEccCCCCCCccc
Q 004979 165 LKELEILDLGFNN-FSG-PFPSDFGNS------FSLTTLLLDNNQYLGGISP--ELHVLKVISEIQVDESWLTNAAS 231 (721)
Q Consensus 165 l~~L~~l~ls~N~-l~G-~iP~~~~~~------~~L~~l~l~~N~~~G~iP~--~~~~l~~L~~l~l~~n~~~g~~p 231 (721)
+++|+.|+|++|+ ++| .+|..++++ ++|++|+|++|+++ .||. .++++++|+.|+|++|.++|.+|
T Consensus 272 l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip 347 (636)
T 4eco_A 272 LPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP 347 (636)
T ss_dssp CSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC
T ss_pred CCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh
Confidence 9999999999998 999 999998887 99999999999999 9999 99999999999999999999998
No 282
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.35 E-value=6.8e-13 Score=126.36 Aligned_cols=112 Identities=20% Similarity=0.165 Sum_probs=100.1
Q ss_pred CcEEEEEeCCCCCC-CcCchhhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccCcccccCCccccCCCCCCEEE
Q 004979 118 GKVVILNLRDLCLG-GMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLL 196 (721)
Q Consensus 118 ~~v~~l~L~~~~l~-G~ip~~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N~l~G~iP~~~~~~~~L~~l~ 196 (721)
.+++.|+|++|.+. |.+|..+..+++|++|+|++|.+++. ..++.+++|+.|+|++|++++.+|..+.++++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 46889999999998 89998889999999999999999876 7889999999999999999998888888899999999
Q ss_pred CccCCCCcC-CChhccCCCCCCEEEccCCCCCCccc
Q 004979 197 LDNNQYLGG-ISPELHVLKVISEIQVDESWLTNAAS 231 (721)
Q Consensus 197 l~~N~~~G~-iP~~~~~l~~L~~l~l~~n~~~g~~p 231 (721)
|++|.+++- .+..+..+++|+.|++++|.+++..+
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~ 137 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLND 137 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTT
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHH
Confidence 999999873 33788999999999999999986543
No 283
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.35 E-value=3.8e-12 Score=122.17 Aligned_cols=107 Identities=18% Similarity=0.193 Sum_probs=93.5
Q ss_pred EEEEeCCCCCCCcCchhhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccCcccccCCccccCCCCCCEEECccC
Q 004979 121 VILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLDNN 200 (721)
Q Consensus 121 ~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N~l~G~iP~~~~~~~~L~~l~l~~N 200 (721)
..++++++.| +.||..+. ++|++|+|++|.|.+..|..++++++|+.|+|++|+|++-.+..+.++++|++|+|++|
T Consensus 15 ~~l~~~~n~l-~~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRL-ASVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCC-SSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCC-CccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 4678889988 57887765 89999999999999999999999999999999999999744445689999999999999
Q ss_pred CCCcCCChhccCCCCCCEEEccCCCCCCcc
Q 004979 201 QYLGGISPELHVLKVISEIQVDESWLTNAA 230 (721)
Q Consensus 201 ~~~G~iP~~~~~l~~L~~l~l~~n~~~g~~ 230 (721)
++++-.+..+..+++|+.|+|++|.|+...
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~ 121 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDCEC 121 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCTTB
T ss_pred ccceeCHHHhccccCCCEEEeCCCCccccc
Confidence 999655555999999999999999998653
No 284
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.33 E-value=4.3e-12 Score=130.95 Aligned_cols=115 Identities=19% Similarity=0.199 Sum_probs=97.7
Q ss_pred CcEEEEEeCCCCCCCcCchhhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccCcccccCCccccCCCCCCEEEC
Q 004979 118 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 197 (721)
Q Consensus 118 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N~l~G~iP~~~~~~~~L~~l~l 197 (721)
.++..|+|++|.+++..+..++.+++|++|+|++|.+++..|..++.+++|+.|+|++|++++..|..++++++|++|++
T Consensus 85 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 164 (272)
T 3rfs_A 85 TNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDL 164 (272)
T ss_dssp TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEEC
Confidence 46888999999998777667888999999999999998777777888999999999999999766666788999999999
Q ss_pred ccCCCCcCCChhccCCCCCCEEEccCCCCCCcccc
Q 004979 198 DNNQYLGGISPELHVLKVISEIQVDESWLTNAASR 232 (721)
Q Consensus 198 ~~N~~~G~iP~~~~~l~~L~~l~l~~n~~~g~~p~ 232 (721)
++|++++-.|..++.+++|+.|+|++|.+++..|.
T Consensus 165 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 199 (272)
T 3rfs_A 165 SYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDG 199 (272)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTT
T ss_pred CCCCcCccCHHHhcCCccCCEEECCCCcCCccCHH
Confidence 99999877666678899999999999999875553
No 285
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.33 E-value=4.9e-12 Score=128.86 Aligned_cols=114 Identities=23% Similarity=0.202 Sum_probs=100.3
Q ss_pred CcEEEEEeCCCCCCCcCchhhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccCcccccCCccccCCCCCCEEEC
Q 004979 118 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 197 (721)
Q Consensus 118 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N~l~G~iP~~~~~~~~L~~l~l 197 (721)
.+++.|+|++|.+++..+..+..+++|++|+|++|.+++..|..+..+++|+.|+|++|++++..|..+.++++|++|+|
T Consensus 59 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 138 (251)
T 3m19_A 59 TKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRL 138 (251)
T ss_dssp TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred ccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEEC
Confidence 47889999999999987778899999999999999999777778899999999999999999666666789999999999
Q ss_pred ccCCCCcCCChhccCCCCCCEEEccCCCCCCccc
Q 004979 198 DNNQYLGGISPELHVLKVISEIQVDESWLTNAAS 231 (721)
Q Consensus 198 ~~N~~~G~iP~~~~~l~~L~~l~l~~n~~~g~~p 231 (721)
++|++++-.|..+..+++|++|+|++|.+++..+
T Consensus 139 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 172 (251)
T 3m19_A 139 NTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPH 172 (251)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred cCCcCCccCHHHcCcCcCCCEEECCCCcCCccCH
Confidence 9999987666678999999999999999996544
No 286
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.32 E-value=5.2e-12 Score=124.72 Aligned_cols=114 Identities=18% Similarity=0.112 Sum_probs=101.0
Q ss_pred CcEEEEEeCCCCCCCcCchhhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccCcccccCCccccCCCCCCEEEC
Q 004979 118 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 197 (721)
Q Consensus 118 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N~l~G~iP~~~~~~~~L~~l~l 197 (721)
.++..|+|++|.+.+..+..+..+++|++|+|++|.+++..+..+..+++|+.|+|++|++++..|..+.++++|++|+|
T Consensus 52 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 131 (208)
T 2o6s_A 52 TSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRL 131 (208)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred ccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEEC
Confidence 47889999999999655556789999999999999999766666899999999999999999766667899999999999
Q ss_pred ccCCCCcCCChhccCCCCCCEEEccCCCCCCccc
Q 004979 198 DNNQYLGGISPELHVLKVISEIQVDESWLTNAAS 231 (721)
Q Consensus 198 ~~N~~~G~iP~~~~~l~~L~~l~l~~n~~~g~~p 231 (721)
++|++++-.+..+..+++|+.|+|++|.+++..|
T Consensus 132 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 165 (208)
T 2o6s_A 132 YQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 165 (208)
T ss_dssp CSSCCSCCCTTTTTTCTTCCEEECCSCCBCCCTT
T ss_pred CCCccceeCHHHhccCCCccEEEecCCCeecCCC
Confidence 9999997666668999999999999999998765
No 287
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.32 E-value=3.4e-12 Score=127.46 Aligned_cols=112 Identities=17% Similarity=0.167 Sum_probs=102.7
Q ss_pred CcEEEEEeCCCCCCCcCchhhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccCcccccCCccccCCCCCCEEEC
Q 004979 118 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 197 (721)
Q Consensus 118 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N~l~G~iP~~~~~~~~L~~l~l 197 (721)
.++..|+|++|.+++..|..+..+++|++|+|++|.|++-.+..+..+++|+.|+|++|++++..|..+.++++|++|+|
T Consensus 56 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 135 (220)
T 2v9t_B 56 KKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSL 135 (220)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEEC
Confidence 47899999999999988999999999999999999999544445788999999999999999988999999999999999
Q ss_pred ccCCCCcCCChhccCCCCCCEEEccCCCCCCc
Q 004979 198 DNNQYLGGISPELHVLKVISEIQVDESWLTNA 229 (721)
Q Consensus 198 ~~N~~~G~iP~~~~~l~~L~~l~l~~n~~~g~ 229 (721)
++|++++-.+..+..+++|+.|+|++|.|+..
T Consensus 136 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 167 (220)
T 2v9t_B 136 YDNKLQTIAKGTFSPLRAIQTMHLAQNPFICD 167 (220)
T ss_dssp CSSCCSCCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred CCCcCCEECHHHHhCCCCCCEEEeCCCCcCCC
Confidence 99999988877899999999999999998754
No 288
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.32 E-value=5.1e-12 Score=126.96 Aligned_cols=113 Identities=19% Similarity=0.126 Sum_probs=101.3
Q ss_pred CcEEEEEeCCCCCCCcCchhhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccCcccccCCccccCCCCCCEEEC
Q 004979 118 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 197 (721)
Q Consensus 118 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N~l~G~iP~~~~~~~~L~~l~l 197 (721)
..+..|+|++|.+++-.+..+..+++|++|+|++|.|++..+..+..+++|+.|+|++|+++ .||..+..+++|++|+|
T Consensus 64 ~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L 142 (229)
T 3e6j_A 64 INLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLAL 142 (229)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEEC
T ss_pred cCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEEC
Confidence 47899999999996544455789999999999999999776777899999999999999999 89999999999999999
Q ss_pred ccCCCCcCCChhccCCCCCCEEEccCCCCCCccc
Q 004979 198 DNNQYLGGISPELHVLKVISEIQVDESWLTNAAS 231 (721)
Q Consensus 198 ~~N~~~G~iP~~~~~l~~L~~l~l~~n~~~g~~p 231 (721)
++|++++-.+..+..+++|+.|+|++|.+++..+
T Consensus 143 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 143 DQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred CCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 9999997666678999999999999999997654
No 289
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.31 E-value=4.9e-12 Score=146.00 Aligned_cols=127 Identities=17% Similarity=0.116 Sum_probs=109.3
Q ss_pred CCCcee----eEEeCC-----------CcEEEEEeCCCCCCCcCchhhcCCCCCCEEEccCCcccccCchhhcCCCCCCE
Q 004979 106 NPCSWF----GVECSD-----------GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEI 170 (721)
Q Consensus 106 ~~C~w~----gv~C~~-----------~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~ 170 (721)
.+|.+. .|.|.. ..++.|+|++|.+++-.+..|.+|++|++|||++|.+++-.|..+.+|++|++
T Consensus 25 ~~c~~~~~~~~~~c~~~~l~~vP~~lp~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~ 104 (635)
T 4g8a_A 25 EPCVEVVPNITYQCMELNFYKIPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLST 104 (635)
T ss_dssp CCSEEEETTTEEECTTSCCSSCCSSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCE
T ss_pred CCccccCCCCEEECCCCCcCccCCCCCcCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCE
Confidence 467653 477852 25789999999999877778999999999999999999877778999999999
Q ss_pred eEcccCcccccCCccccCCCCCCEEECccCCCCcCCChhccCCCCCCEEEccCCCCCC-cccc
Q 004979 171 LDLGFNNFSGPFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLTN-AASR 232 (721)
Q Consensus 171 l~ls~N~l~G~iP~~~~~~~~L~~l~l~~N~~~G~iP~~~~~l~~L~~l~l~~n~~~g-~~p~ 232 (721)
|+|++|++++-.|..+.++++|++|+|++|++++-.+..++++++|++|+|++|.+++ .+|.
T Consensus 105 L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~ 167 (635)
T 4g8a_A 105 LILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPE 167 (635)
T ss_dssp EECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCG
T ss_pred EEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCch
Confidence 9999999997666678999999999999999998666679999999999999999976 3444
No 290
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.31 E-value=5.8e-12 Score=134.71 Aligned_cols=109 Identities=18% Similarity=0.145 Sum_probs=94.3
Q ss_pred CceeeEEeCCCcEEEEEeCCC-CCCCcCchhhcCCCCCCEEEccC-CcccccCchhhcCCCCCCEeEcccCcccccCCcc
Q 004979 108 CSWFGVECSDGKVVILNLRDL-CLGGMLAPELGQLSELKSIILRN-NSFFGTIPKEIGELKELEILDLGFNNFSGPFPSD 185 (721)
Q Consensus 108 C~w~gv~C~~~~v~~l~L~~~-~l~G~ip~~l~~l~~L~~L~L~~-n~l~G~ip~~l~~l~~L~~l~ls~N~l~G~iP~~ 185 (721)
|.|..|.|. ++ +|.+ ||. |..+++|+.|+|++ |.|.+..|..+++|++|+.|+|++|+|+|..|..
T Consensus 8 C~~~~v~~~----------~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~ 75 (347)
T 2ifg_A 8 HGSSGLRCT----------RDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDA 75 (347)
T ss_dssp SSSSCEECC----------SSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTG
T ss_pred ccCCEEEcC----------CCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHH
Confidence 888888775 44 6665 888 99999999999996 9999888889999999999999999999998989
Q ss_pred ccCCCCCCEEECccCCCCcCCChhccCCCCCCEEEccCCCCCCc
Q 004979 186 FGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLTNA 229 (721)
Q Consensus 186 ~~~~~~L~~l~l~~N~~~G~iP~~~~~l~~L~~l~l~~n~~~g~ 229 (721)
|+++++|+.|+|++|+|++ +|+.+.....|+.|+|.+|.|...
T Consensus 76 ~~~l~~L~~L~l~~N~l~~-~~~~~~~~~~L~~l~l~~N~~~c~ 118 (347)
T 2ifg_A 76 FHFTPRLSRLNLSFNALES-LSWKTVQGLSLQELVLSGNPLHCS 118 (347)
T ss_dssp GGSCSCCCEEECCSSCCSC-CCSTTTCSCCCCEEECCSSCCCCC
T ss_pred hcCCcCCCEEeCCCCccce-eCHHHcccCCceEEEeeCCCccCC
Confidence 9999999999999999996 555444433499999999999864
No 291
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.30 E-value=8.3e-12 Score=128.81 Aligned_cols=112 Identities=22% Similarity=0.176 Sum_probs=100.6
Q ss_pred CcEEEEEeCCCCCCCcCchhhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccCcccccCCccccCCCCCCEEEC
Q 004979 118 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 197 (721)
Q Consensus 118 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N~l~G~iP~~~~~~~~L~~l~l 197 (721)
..+..|+|++|.+.+ + +.+..+++|++|+|++|.+++..|..++++++|+.|+|++|++++..|..++++++|++|+|
T Consensus 63 ~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 140 (272)
T 3rfs_A 63 PNVRYLALGGNKLHD-I-SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNL 140 (272)
T ss_dssp TTCCEEECTTSCCCC-C-GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEECCCCCCCC-c-hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEEC
Confidence 578899999999988 3 47999999999999999999877777899999999999999999877777899999999999
Q ss_pred ccCCCCcCCChhccCCCCCCEEEccCCCCCCccc
Q 004979 198 DNNQYLGGISPELHVLKVISEIQVDESWLTNAAS 231 (721)
Q Consensus 198 ~~N~~~G~iP~~~~~l~~L~~l~l~~n~~~g~~p 231 (721)
++|++++-.|..++.+++|+.|+|++|.+++..+
T Consensus 141 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 174 (272)
T 3rfs_A 141 AHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPE 174 (272)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCT
T ss_pred CCCccCccCHHHhccCccCCEEECCCCCcCccCH
Confidence 9999997777678999999999999999997544
No 292
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.29 E-value=8.7e-12 Score=143.64 Aligned_cols=128 Identities=20% Similarity=0.160 Sum_probs=109.3
Q ss_pred CCCcee----eEEeCC-----------CcEEEEEeCCCCCCCcCchhhcCCCCCCEEEccCCcccccCchhhcCCCCCCE
Q 004979 106 NPCSWF----GVECSD-----------GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEI 170 (721)
Q Consensus 106 ~~C~w~----gv~C~~-----------~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~ 170 (721)
+||.|. .+.|.. .+++.|+|++|.+.+..+..+.++++|++|+|++|.+++..|..++++++|++
T Consensus 5 ~~c~~~~~~~~~~c~~~~l~~ip~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~ 84 (606)
T 3vq2_A 5 NPCIEVVPNITYQCMDQKLSKVPDDIPSSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSN 84 (606)
T ss_dssp -CCEEEETTTEEECTTSCCSSCCTTSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCE
T ss_pred CCceecCCCCceEccCCCcccCCCCCCCCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCE
Confidence 567763 577852 36889999999999888888999999999999999999888888999999999
Q ss_pred eEcccCcccccCCccccCCCCCCEEECccCCCCcCCChhccCCCCCCEEEccCCCCCC-ccccc
Q 004979 171 LDLGFNNFSGPFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLTN-AASRA 233 (721)
Q Consensus 171 l~ls~N~l~G~iP~~~~~~~~L~~l~l~~N~~~G~iP~~~~~l~~L~~l~l~~n~~~g-~~p~~ 233 (721)
|+|++|.+++..|..++++++|++|+|++|.+++-.|..++++.+|++|+|++|.+++ .+|..
T Consensus 85 L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~ 148 (606)
T 3vq2_A 85 LILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAY 148 (606)
T ss_dssp EECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGG
T ss_pred eECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHh
Confidence 9999999998889899999999999999999988777788889999999999998876 56653
No 293
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.28 E-value=8.3e-12 Score=134.43 Aligned_cols=124 Identities=19% Similarity=0.207 Sum_probs=109.7
Q ss_pred CceeeEEeCC-----------CcEEEEEeCCCCCCCcCchhhc-CCCCCCEEEccCCcccccCchhhcCCCCCCEeEccc
Q 004979 108 CSWFGVECSD-----------GKVVILNLRDLCLGGMLAPELG-QLSELKSIILRNNSFFGTIPKEIGELKELEILDLGF 175 (721)
Q Consensus 108 C~w~gv~C~~-----------~~v~~l~L~~~~l~G~ip~~l~-~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~ 175 (721)
|.|..+.|.. ..++.|+|++|.+++..+..+. .+++|+.|+|++|.+++..|..+.++++|++|+|++
T Consensus 18 C~~~~l~c~~~~l~~iP~~~~~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 18 CASNILSCSKQQLPNVPQSLPSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp EETTEEECCSSCCSSCCSSCCTTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred ECCCEEEeCCCCcCccCccCCCCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 6788899963 2467899999999987776676 999999999999999988788899999999999999
Q ss_pred CcccccCCccccCCCCCCEEECccCCCCcCCChhccCCCCCCEEEccCCCCCCcccc
Q 004979 176 NNFSGPFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLTNAASR 232 (721)
Q Consensus 176 N~l~G~iP~~~~~~~~L~~l~l~~N~~~G~iP~~~~~l~~L~~l~l~~n~~~g~~p~ 232 (721)
|+|++..+..+.++++|++|+|++|++++-.|..+..+++|+.|+|++|.+++ +|.
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~-l~~ 153 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISR-FPV 153 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCS-CCG
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCe-eCH
Confidence 99997777778999999999999999998888899999999999999999986 444
No 294
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.27 E-value=6.2e-12 Score=141.02 Aligned_cols=121 Identities=19% Similarity=0.112 Sum_probs=89.2
Q ss_pred CceeeEEeCC-CcEEEEEeCCCCCCCcCchhhcCCCCCCEEEccCCcccccCchhhc-CCCCCCEeEcccCcccccCCcc
Q 004979 108 CSWFGVECSD-GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIG-ELKELEILDLGFNNFSGPFPSD 185 (721)
Q Consensus 108 C~w~gv~C~~-~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~l~G~ip~~l~-~l~~L~~l~ls~N~l~G~iP~~ 185 (721)
|.+.++.|.. ..+..|+|++|.++|..|..++.+++|++|+|++|.++|.+|..+. .+++|+.|+|++|.|++. | .
T Consensus 109 N~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~-~-~ 186 (487)
T 3oja_A 109 NNISRVSCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-K-G 186 (487)
T ss_dssp SCCCCEEECCCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-E-C
T ss_pred CcCCCCCccccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc-c-c
Confidence 5566666652 4677788888888877777777788888888888888887777765 678888888888888765 2 2
Q ss_pred ccCCCCCCEEECccCCCCcCCChhccCCCCCCEEEccCCCCCCcccc
Q 004979 186 FGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLTNAASR 232 (721)
Q Consensus 186 ~~~~~~L~~l~l~~N~~~G~iP~~~~~l~~L~~l~l~~n~~~g~~p~ 232 (721)
+..+++|+.|+|++|.++| +|+.+..+++|+.|+|++|.+++ +|.
T Consensus 187 ~~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~Ls~N~l~~-lp~ 231 (487)
T 3oja_A 187 QVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVL-IEK 231 (487)
T ss_dssp CCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCCE-ECT
T ss_pred cccCCCCCEEECCCCCCCC-CCHhHcCCCCccEEEecCCcCcc-cch
Confidence 3457788888888888876 45557778888888888888775 443
No 295
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.27 E-value=2.2e-11 Score=125.74 Aligned_cols=114 Identities=17% Similarity=0.065 Sum_probs=99.4
Q ss_pred cEEEEEeCCCCCCCcCchhhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccCcccccCCccccCCCCCCEEECc
Q 004979 119 KVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLD 198 (721)
Q Consensus 119 ~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N~l~G~iP~~~~~~~~L~~l~l~ 198 (721)
.++.|+|++|.+.+..+..+.++++|++|+|++|.+.+..+..+.++++|+.|+|++|.+++..|..+.++++|++|+++
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 108 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred CccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECC
Confidence 47899999999988777788999999999999999987777788999999999999999998888888999999999999
Q ss_pred cCCCCcCCChhccCCCCCCEEEccCCCCCC-cccc
Q 004979 199 NNQYLGGISPELHVLKVISEIQVDESWLTN-AASR 232 (721)
Q Consensus 199 ~N~~~G~iP~~~~~l~~L~~l~l~~n~~~g-~~p~ 232 (721)
+|++++-.+..++.+++|++|+|++|.+++ .+|.
T Consensus 109 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~ 143 (276)
T 2z62_A 109 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPE 143 (276)
T ss_dssp TSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCG
T ss_pred CCCccccCchhcccCCCCCEEECcCCccceecCch
Confidence 999988777678899999999999999886 3454
No 296
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.27 E-value=1.1e-11 Score=137.53 Aligned_cols=112 Identities=19% Similarity=0.134 Sum_probs=96.0
Q ss_pred CcEEEEEeCCCCCCCcCchhhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccCcccccCCccccCCCCCCEEEC
Q 004979 118 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 197 (721)
Q Consensus 118 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N~l~G~iP~~~~~~~~L~~l~l 197 (721)
..+..++|++|.+.+.+|..++.+++|++|+|++|.+.+..|..++.+++|+.|+|++|.+++..|..+.++++|++|+|
T Consensus 275 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 354 (455)
T 3v47_A 275 SGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDL 354 (455)
T ss_dssp SCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEEC
T ss_pred cCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEEC
Confidence 36788888888888888888888888888888888888888888888888888888888888777888888888888888
Q ss_pred ccCCCCcCCChhccCCCCCCEEEccCCCCCCc
Q 004979 198 DNNQYLGGISPELHVLKVISEIQVDESWLTNA 229 (721)
Q Consensus 198 ~~N~~~G~iP~~~~~l~~L~~l~l~~n~~~g~ 229 (721)
++|++++.+|..+..+++|++|+|++|.+++.
T Consensus 355 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 386 (455)
T 3v47_A 355 SYNHIRALGDQSFLGLPNLKELALDTNQLKSV 386 (455)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCCcccccChhhccccccccEEECCCCccccC
Confidence 88888888888888888888888888888863
No 297
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.26 E-value=2e-12 Score=153.82 Aligned_cols=122 Identities=15% Similarity=0.165 Sum_probs=110.9
Q ss_pred CceeeEEeC---CCcEEEEEeCCCCCCC-----------------cCchhhc--CCCCCCEEEccCCcccccCchhhcCC
Q 004979 108 CSWFGVECS---DGKVVILNLRDLCLGG-----------------MLAPELG--QLSELKSIILRNNSFFGTIPKEIGEL 165 (721)
Q Consensus 108 C~w~gv~C~---~~~v~~l~L~~~~l~G-----------------~ip~~l~--~l~~L~~L~L~~n~l~G~ip~~l~~l 165 (721)
|...|+.-. -.++..|+|++|.|+| .||+.++ +|++|++|+|++|.+.|.+|..++++
T Consensus 435 N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L 514 (876)
T 4ecn_A 435 NRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDL 514 (876)
T ss_dssp CEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGC
T ss_pred CcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCC
Confidence 566774322 3578999999999999 4999988 99999999999999999999999999
Q ss_pred CCCCEeEcccCc-ccc-cCCccccCCC-------CCCEEECccCCCCcCCCh--hccCCCCCCEEEccCCCCCCccc
Q 004979 166 KELEILDLGFNN-FSG-PFPSDFGNSF-------SLTTLLLDNNQYLGGISP--ELHVLKVISEIQVDESWLTNAAS 231 (721)
Q Consensus 166 ~~L~~l~ls~N~-l~G-~iP~~~~~~~-------~L~~l~l~~N~~~G~iP~--~~~~l~~L~~l~l~~n~~~g~~p 231 (721)
++|+.|+|++|+ |+| .+|..+++++ +|++|+|++|+++ .||. .++++++|+.|+|++|.++ .+|
T Consensus 515 ~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp 589 (876)
T 4ecn_A 515 PELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE 589 (876)
T ss_dssp SSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC
T ss_pred CCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch
Confidence 999999999998 999 9998777665 9999999999999 9999 9999999999999999999 888
No 298
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.26 E-value=8.6e-12 Score=122.12 Aligned_cols=108 Identities=12% Similarity=0.181 Sum_probs=93.8
Q ss_pred CcEEEEEeCCCCCCCcCchhhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccCcccccCCccccCCCCCCEEEC
Q 004979 118 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 197 (721)
Q Consensus 118 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N~l~G~iP~~~~~~~~L~~l~l 197 (721)
.++..|+|++|.+ ..++.+..+++|++|+|++|.+++..|..++.+++|+.|+|++|++++..|..++.+++|++|++
T Consensus 66 ~~L~~L~l~~n~~--~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L 143 (197)
T 4ezg_A 66 HNIKDLTINNIHA--TNYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDL 143 (197)
T ss_dssp TTCSEEEEESCCC--SCCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEEC
T ss_pred CCCCEEEccCCCC--CcchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEc
Confidence 4678889988854 34457888999999999999999888888999999999999999999988888999999999999
Q ss_pred ccCCCCcCCChhccCCCCCCEEEccCCCCCC
Q 004979 198 DNNQYLGGISPELHVLKVISEIQVDESWLTN 228 (721)
Q Consensus 198 ~~N~~~G~iP~~~~~l~~L~~l~l~~n~~~g 228 (721)
++|.+.+.+| .+..+++|+.|++++|.+++
T Consensus 144 ~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~~ 173 (197)
T 4ezg_A 144 SYNGAITDIM-PLKTLPELKSLNIQFDGVHD 173 (197)
T ss_dssp CSCTBCCCCG-GGGGCSSCCEEECTTBCCCC
T ss_pred cCCCCccccH-hhcCCCCCCEEECCCCCCcC
Confidence 9998667787 68889999999999999886
No 299
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.26 E-value=5.8e-12 Score=150.95 Aligned_cols=123 Identities=20% Similarity=0.186 Sum_probs=78.3
Q ss_pred CceeeEEeCCCcEEEEEeCCCCCCCcCchhhcCCCCCCEEEccCCcccccC-chhhcCCCCCCEeEcccCcccccCCccc
Q 004979 108 CSWFGVECSDGKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTI-PKEIGELKELEILDLGFNNFSGPFPSDF 186 (721)
Q Consensus 108 C~w~gv~C~~~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~l~G~i-p~~l~~l~~L~~l~ls~N~l~G~iP~~~ 186 (721)
|.|..|.+-..+++.|+|++|.+++..|..+.+|++|++|+|++|.+.+.| |..++++++|++|+|++|++++..|..+
T Consensus 14 ~~L~~vP~lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~ 93 (844)
T 3j0a_A 14 CNLTQVPQVLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAF 93 (844)
T ss_dssp CCSSCCCSSCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSS
T ss_pred CCCCCCCCCCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHc
Confidence 445555553346667777777776666666666666666666666666666 4456666666666666666666666666
Q ss_pred cCCCCCCEEECccCCCCcCCChh--ccCCCCCCEEEccCCCCCCcc
Q 004979 187 GNSFSLTTLLLDNNQYLGGISPE--LHVLKVISEIQVDESWLTNAA 230 (721)
Q Consensus 187 ~~~~~L~~l~l~~N~~~G~iP~~--~~~l~~L~~l~l~~n~~~g~~ 230 (721)
+++++|++|+|++|.+++.+|.. ++++++|++|+|++|.+++..
T Consensus 94 ~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~ 139 (844)
T 3j0a_A 94 QGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLY 139 (844)
T ss_dssp CSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCC
T ss_pred cCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccc
Confidence 66666666666666666665554 566666666666666666543
No 300
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.25 E-value=1.6e-11 Score=141.32 Aligned_cols=112 Identities=16% Similarity=0.165 Sum_probs=72.1
Q ss_pred EEEEEeCCCCCCCcCchhhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccCcccccCCccccCCCCCCEEECcc
Q 004979 120 VVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLDN 199 (721)
Q Consensus 120 v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N~l~G~iP~~~~~~~~L~~l~l~~ 199 (721)
+..++|+++.+++-.+..+..+++|++|+|++|.+.+..|..++.+++|+.|+|++|.+++..|..++++++|++|+|++
T Consensus 53 l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 132 (597)
T 3oja_B 53 QKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLER 132 (597)
T ss_dssp CSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred ceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeC
Confidence 34566666665443333356677777777777777766666677777777777777777766666666777777777777
Q ss_pred CCCCcCCChhccCCCCCCEEEccCCCCCCccc
Q 004979 200 NQYLGGISPELHVLKVISEIQVDESWLTNAAS 231 (721)
Q Consensus 200 N~~~G~iP~~~~~l~~L~~l~l~~n~~~g~~p 231 (721)
|.+++-.+..++.+++|++|+|++|.+++..|
T Consensus 133 n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~ 164 (597)
T 3oja_B 133 NDLSSLPRGIFHNTPKLTTLSMSNNNLERIED 164 (597)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCBCCT
T ss_pred CCCCCCCHHHhccCCCCCEEEeeCCcCCCCCh
Confidence 77663322334667777777777777766544
No 301
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.24 E-value=1.6e-11 Score=128.75 Aligned_cols=112 Identities=17% Similarity=0.137 Sum_probs=84.9
Q ss_pred CcEEEEEeCCCCCCCcCc-hhhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccCcccc-cCCccccCCCCCCEE
Q 004979 118 GKVVILNLRDLCLGGMLA-PELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSG-PFPSDFGNSFSLTTL 195 (721)
Q Consensus 118 ~~v~~l~L~~~~l~G~ip-~~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N~l~G-~iP~~~~~~~~L~~l 195 (721)
..+..|+|++|.+.+..+ ..+..+++|++|+|++|.+.+.+|..+..+++|+.|+|++|.+++ .+|..+..+++|++|
T Consensus 101 ~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L 180 (306)
T 2z66_A 101 EQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFL 180 (306)
T ss_dssp TTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEE
T ss_pred CCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEE
Confidence 467777787777776554 457777788888888888777777777777888888888887776 567777777788888
Q ss_pred ECccCCCCcCCChhccCCCCCCEEEccCCCCCCc
Q 004979 196 LLDNNQYLGGISPELHVLKVISEIQVDESWLTNA 229 (721)
Q Consensus 196 ~l~~N~~~G~iP~~~~~l~~L~~l~l~~n~~~g~ 229 (721)
+|++|.+++..|..+..+++|+.|+|++|.+++.
T Consensus 181 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 214 (306)
T 2z66_A 181 DLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSL 214 (306)
T ss_dssp ECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBC
T ss_pred ECCCCCcCCcCHHHhcCCCCCCEEECCCCccCcc
Confidence 8888887777777777777888888888877754
No 302
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.24 E-value=5e-12 Score=143.69 Aligned_cols=111 Identities=26% Similarity=0.321 Sum_probs=98.9
Q ss_pred CCC-----ceeeE-EeCCCcEEEEEeCCCCCCCcCchhhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccCccc
Q 004979 106 NPC-----SWFGV-ECSDGKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFS 179 (721)
Q Consensus 106 ~~C-----~w~gv-~C~~~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N~l~ 179 (721)
.+| .|.|+ .|..++++.|+|++|+|++ ||+.+. ++|++|+|++|.|+ .|| ..+++|+.|+|++|+|+
T Consensus 41 ~~~~~~~~~~~~l~~C~~~~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~ 113 (571)
T 3cvr_A 41 LPGENRNEAVSLLKECLINQFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLS 113 (571)
T ss_dssp CTTCCHHHHHHHHHHHHHTTCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCS
T ss_pred CccccccchhhhccccccCCccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCC
Confidence 567 79999 7877789999999999998 888774 89999999999999 788 56899999999999999
Q ss_pred ccCCccccCCCCCCEEECccCCCCcCCChhccCCCCCCEEEccCCCCCCcccc
Q 004979 180 GPFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLTNAASR 232 (721)
Q Consensus 180 G~iP~~~~~~~~L~~l~l~~N~~~G~iP~~~~~l~~L~~l~l~~n~~~g~~p~ 232 (721)
+ ||. +.+ +|++|+|++|++++ ||. .+++|+.|+|++|.+++ +|.
T Consensus 114 ~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~ 157 (571)
T 3cvr_A 114 T-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE 157 (571)
T ss_dssp C-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC
T ss_pred C-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC
Confidence 8 888 665 99999999999998 887 68999999999999997 665
No 303
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.24 E-value=1.3e-11 Score=120.84 Aligned_cols=111 Identities=14% Similarity=0.131 Sum_probs=97.8
Q ss_pred CcEEEEEeCCCCCCCcCchhhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccCcccccCCccccCCCCCCEEEC
Q 004979 118 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 197 (721)
Q Consensus 118 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N~l~G~iP~~~~~~~~L~~l~l 197 (721)
.+++.|+|+++.+. .+| .+..+++|++|+|++|.+. .++.+..+++|+.|+|++|.+++..|..++.+++|++|+|
T Consensus 44 ~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L 119 (197)
T 4ezg_A 44 NSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDI 119 (197)
T ss_dssp HTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEEC
T ss_pred CCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEe
Confidence 36788999999998 666 7899999999999999654 4558899999999999999999989999999999999999
Q ss_pred ccCCCCcCCChhccCCCCCCEEEccCCCCCCcccc
Q 004979 198 DNNQYLGGISPELHVLKVISEIQVDESWLTNAASR 232 (721)
Q Consensus 198 ~~N~~~G~iP~~~~~l~~L~~l~l~~n~~~g~~p~ 232 (721)
++|.+++.+|..++.+++|++|+|++|.+.+.+|.
T Consensus 120 s~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~~ 154 (197)
T 4ezg_A 120 SHSAHDDSILTKINTLPKVNSIDLSYNGAITDIMP 154 (197)
T ss_dssp CSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCGG
T ss_pred cCCccCcHhHHHHhhCCCCCEEEccCCCCccccHh
Confidence 99999999999999999999999999985455653
No 304
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.23 E-value=1.1e-11 Score=132.98 Aligned_cols=124 Identities=23% Similarity=0.257 Sum_probs=99.6
Q ss_pred CCCceeeEEeCC-------------CcEEEEEeCCCCCCCcCchhhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeE
Q 004979 106 NPCSWFGVECSD-------------GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILD 172 (721)
Q Consensus 106 ~~C~w~gv~C~~-------------~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ 172 (721)
.+|.|.|+ |+. .+++.|+|++|.+.+..+..+.++++|++|+|++|.+++..|..++++++|++|+
T Consensus 28 ~~C~~~~~-c~~~~~~l~~iP~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (353)
T 2z80_A 28 LSCDRNGI-CKGSSGSLNSIPSGLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLD 106 (353)
T ss_dssp CEECTTSE-EECCSTTCSSCCTTCCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCCCeE-eeCCCCCcccccccccccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEE
Confidence 56899987 641 2578899999998876556788999999999999999988788899999999999
Q ss_pred cccCcccccCCccccCCCCCCEEECccCCCCcCCCh--hccCCCCCCEEEccCCCCCCccc
Q 004979 173 LGFNNFSGPFPSDFGNSFSLTTLLLDNNQYLGGISP--ELHVLKVISEIQVDESWLTNAAS 231 (721)
Q Consensus 173 ls~N~l~G~iP~~~~~~~~L~~l~l~~N~~~G~iP~--~~~~l~~L~~l~l~~n~~~g~~p 231 (721)
|++|++++-.+..++++++|++|+|++|.++ .+|. .+..+++|++|++++|...+.++
T Consensus 107 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~~l~~L~~L~l~~n~~~~~~~ 166 (353)
T 2z80_A 107 LSYNYLSNLSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQILRVGNMDTFTKIQ 166 (353)
T ss_dssp CCSSCCSSCCHHHHTTCTTCSEEECTTCCCS-SSCSSCSCTTCTTCCEEEEEESSSCCEEC
T ss_pred CCCCcCCcCCHhHhCCCccCCEEECCCCCCc-ccCchhhhccCCCCcEEECCCCccccccC
Confidence 9999998533334888999999999999888 4665 67889999999999885333443
No 305
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.23 E-value=4.3e-11 Score=116.87 Aligned_cols=104 Identities=22% Similarity=0.302 Sum_probs=94.8
Q ss_pred EEEEeCCCCCCCcCchhhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccCcccccCCccccCCCCCCEEECccC
Q 004979 121 VILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLDNN 200 (721)
Q Consensus 121 ~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N~l~G~iP~~~~~~~~L~~l~l~~N 200 (721)
..++++++++. .||..+. +.|++|+|++|.++ .||..+.++++|+.|+|++|++++..|..+.++++|++|+|++|
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 36889999987 5776553 68999999999998 89999999999999999999999887788999999999999999
Q ss_pred CCCcCCChhccCCCCCCEEEccCCCCCC
Q 004979 201 QYLGGISPELHVLKVISEIQVDESWLTN 228 (721)
Q Consensus 201 ~~~G~iP~~~~~l~~L~~l~l~~n~~~g 228 (721)
++++-.|..+..+++|+.|+|++|.+++
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~ 116 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISV 116 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCB
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCe
Confidence 9999888889999999999999999995
No 306
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.23 E-value=5.1e-12 Score=133.15 Aligned_cols=110 Identities=21% Similarity=0.221 Sum_probs=86.3
Q ss_pred CcEEEEEeCCCCCCCcCchhh--cCCCCCCEEEccCCcccccCchhhcCC-----CCCCEeEcccCcccccCCccccCCC
Q 004979 118 GKVVILNLRDLCLGGMLAPEL--GQLSELKSIILRNNSFFGTIPKEIGEL-----KELEILDLGFNNFSGPFPSDFGNSF 190 (721)
Q Consensus 118 ~~v~~l~L~~~~l~G~ip~~l--~~l~~L~~L~L~~n~l~G~ip~~l~~l-----~~L~~l~ls~N~l~G~iP~~~~~~~ 190 (721)
.++..|+|++|.++|.+|..+ +.+++|++|+|++|.+++. |..++.+ ++|++|+|++|++++..|..+++++
T Consensus 95 ~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~ 173 (312)
T 1wwl_A 95 SGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFP 173 (312)
T ss_dssp SCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCS
T ss_pred CCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCC
Confidence 367788888888888888776 7788888888888888876 7767666 7888888888888877777888888
Q ss_pred CCCEEECccCCCCcC--CChhc--cCCCCCCEEEccCCCCCC
Q 004979 191 SLTTLLLDNNQYLGG--ISPEL--HVLKVISEIQVDESWLTN 228 (721)
Q Consensus 191 ~L~~l~l~~N~~~G~--iP~~~--~~l~~L~~l~l~~n~~~g 228 (721)
+|++|+|++|+++|. +|+.+ ..+++|++|+|++|.+++
T Consensus 174 ~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~ 215 (312)
T 1wwl_A 174 ALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMET 215 (312)
T ss_dssp SCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCC
T ss_pred CCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcc
Confidence 888888888888776 34455 778888888888888874
No 307
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.22 E-value=2.9e-11 Score=125.45 Aligned_cols=114 Identities=18% Similarity=0.169 Sum_probs=71.3
Q ss_pred cEEEEEeCCCC-CCCcCchhhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccCcccccCCccccCCCCCCEEEC
Q 004979 119 KVVILNLRDLC-LGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 197 (721)
Q Consensus 119 ~v~~l~L~~~~-l~G~ip~~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N~l~G~iP~~~~~~~~L~~l~l 197 (721)
.+..|+|++|. +.+..|..+..+++|++|+|++|.+++..|..+.++++|+.|+|++|++++..+..++.+++|++|+|
T Consensus 81 ~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 160 (285)
T 1ozn_A 81 LLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFL 160 (285)
T ss_dssp TCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEEC
Confidence 56666666665 44433555666666666666666666655666666666666666666666544445666666666666
Q ss_pred ccCCCCcCCChhccCCCCCCEEEccCCCCCCcccc
Q 004979 198 DNNQYLGGISPELHVLKVISEIQVDESWLTNAASR 232 (721)
Q Consensus 198 ~~N~~~G~iP~~~~~l~~L~~l~l~~n~~~g~~p~ 232 (721)
++|++++-.+..+..+++|+.|+|++|.+++..|.
T Consensus 161 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 195 (285)
T 1ozn_A 161 HGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPH 195 (285)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTT
T ss_pred CCCcccccCHHHhcCccccCEEECCCCcccccCHh
Confidence 66666654444466666666666666666655443
No 308
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.22 E-value=3.2e-11 Score=124.52 Aligned_cols=114 Identities=15% Similarity=0.137 Sum_probs=105.0
Q ss_pred CcEEEEEeCCCCCCCcCchhhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccCcccccCCccccCCCCCCEEEC
Q 004979 118 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 197 (721)
Q Consensus 118 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N~l~G~iP~~~~~~~~L~~l~l 197 (721)
.++..|+|++|.+.+..+..+..+++|++|+|++|.+.+..|..+.++++|+.|++++|++++..+..++++++|++|++
T Consensus 52 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 131 (276)
T 2z62_A 52 PELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNV 131 (276)
T ss_dssp TTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEEC
T ss_pred cCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEEC
Confidence 47889999999999877778999999999999999999988889999999999999999999877778999999999999
Q ss_pred ccCCCCc-CCChhccCCCCCCEEEccCCCCCCccc
Q 004979 198 DNNQYLG-GISPELHVLKVISEIQVDESWLTNAAS 231 (721)
Q Consensus 198 ~~N~~~G-~iP~~~~~l~~L~~l~l~~n~~~g~~p 231 (721)
++|.+++ .+|..++.+++|+.|+|++|.+++..+
T Consensus 132 ~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~ 166 (276)
T 2z62_A 132 AHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYC 166 (276)
T ss_dssp CSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECG
T ss_pred cCCccceecCchhhccCCCCCEEECCCCCCCcCCH
Confidence 9999987 689999999999999999999987543
No 309
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.21 E-value=3.1e-11 Score=125.23 Aligned_cols=112 Identities=19% Similarity=0.102 Sum_probs=101.3
Q ss_pred cEEEEEeCCCCCCCcCchhhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccCc-ccccCCccccCCCCCCEEEC
Q 004979 119 KVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNN-FSGPFPSDFGNSFSLTTLLL 197 (721)
Q Consensus 119 ~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N~-l~G~iP~~~~~~~~L~~l~l 197 (721)
.++.|+|++|.+.+..+..+..+++|++|+|++|.+++..|..+..+++|+.|+|++|. +++..|..+..+++|++|++
T Consensus 33 ~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l 112 (285)
T 1ozn_A 33 ASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHL 112 (285)
T ss_dssp TCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEEC
T ss_pred CceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEEC
Confidence 57899999999998777789999999999999999998889999999999999999998 66655788999999999999
Q ss_pred ccCCCCcCCChhccCCCCCCEEEccCCCCCCcc
Q 004979 198 DNNQYLGGISPELHVLKVISEIQVDESWLTNAA 230 (721)
Q Consensus 198 ~~N~~~G~iP~~~~~l~~L~~l~l~~n~~~g~~ 230 (721)
++|.+++..|..+..+++|++|+|++|.+++..
T Consensus 113 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 145 (285)
T 1ozn_A 113 DRCGLQELGPGLFRGLAALQYLYLQDNALQALP 145 (285)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCC
T ss_pred CCCcCCEECHhHhhCCcCCCEEECCCCcccccC
Confidence 999999888888999999999999999998643
No 310
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.21 E-value=2.1e-11 Score=137.79 Aligned_cols=108 Identities=21% Similarity=0.257 Sum_probs=101.6
Q ss_pred CcEEEEEeCCCCCCCcCchhhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccCcccccCCccccCCCCCCEEEC
Q 004979 118 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 197 (721)
Q Consensus 118 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N~l~G~iP~~~~~~~~L~~l~l 197 (721)
.+++.|+|++|.+.+..|..+.++++|++|+|++|.+++..|..++++++|++|||++|+++ .||.. .+++|++|+|
T Consensus 21 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L 97 (520)
T 2z7x_B 21 QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCH--PTVNLKHLDL 97 (520)
T ss_dssp TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC--CCCCCSEEEC
T ss_pred ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCcc--ccCCccEEec
Confidence 57889999999999988889999999999999999999988999999999999999999999 68877 8999999999
Q ss_pred ccCCCCc-CCChhccCCCCCCEEEccCCCCCC
Q 004979 198 DNNQYLG-GISPELHVLKVISEIQVDESWLTN 228 (721)
Q Consensus 198 ~~N~~~G-~iP~~~~~l~~L~~l~l~~n~~~g 228 (721)
++|.+++ .+|..++++++|++|+|++|.+++
T Consensus 98 ~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~ 129 (520)
T 2z7x_B 98 SFNAFDALPICKEFGNMSQLKFLGLSTTHLEK 129 (520)
T ss_dssp CSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG
T ss_pred cCCccccccchhhhccCCcceEEEecCcccch
Confidence 9999998 799999999999999999999986
No 311
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.21 E-value=9.7e-12 Score=115.78 Aligned_cols=103 Identities=17% Similarity=0.147 Sum_probs=94.3
Q ss_pred CcEEEEEeCCCCCCCcCchhhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccCcccc-cCCccccCCCCCCEEE
Q 004979 118 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSG-PFPSDFGNSFSLTTLL 196 (721)
Q Consensus 118 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N~l~G-~iP~~~~~~~~L~~l~ 196 (721)
.++..|+|++|.+.+. ..++.+++|++|+|++|.+++.+|..++.+++|+.|+|++|.+++ +.|..++.+++|++|+
T Consensus 42 ~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~l~~L~~L~ 119 (149)
T 2je0_A 42 EELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLD 119 (149)
T ss_dssp TTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEECTTSCCCSHHHHGGGGGCTTCCEEE
T ss_pred CCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEECCCCcCCChHHHHHHhhCCCCCEEe
Confidence 5789999999999987 779999999999999999999999988899999999999999998 4568899999999999
Q ss_pred CccCCCCcCCC---hhccCCCCCCEEEcc
Q 004979 197 LDNNQYLGGIS---PELHVLKVISEIQVD 222 (721)
Q Consensus 197 l~~N~~~G~iP---~~~~~l~~L~~l~l~ 222 (721)
+++|.+++..+ ..+..+++|+.|+++
T Consensus 120 l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 120 LFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp CTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred CcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 99999998766 578999999999886
No 312
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.20 E-value=3.2e-11 Score=138.93 Aligned_cols=115 Identities=15% Similarity=0.163 Sum_probs=107.0
Q ss_pred CcEEEEEeCCCCCCCcCchhhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccCcccccCCccccCCCCCCEEEC
Q 004979 118 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 197 (721)
Q Consensus 118 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N~l~G~iP~~~~~~~~L~~l~l 197 (721)
.+++.|+|++|.+.+..|..++++++|++|+|++|.+.+..|..++++++|++|+|++|.+++..|..++++++|++|+|
T Consensus 56 ~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 135 (606)
T 3vq2_A 56 SELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNV 135 (606)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEEC
T ss_pred ccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeC
Confidence 47899999999999888888999999999999999999988999999999999999999999877788999999999999
Q ss_pred ccCCCCc-CCChhccCCCCCCEEEccCCCCCCcccc
Q 004979 198 DNNQYLG-GISPELHVLKVISEIQVDESWLTNAASR 232 (721)
Q Consensus 198 ~~N~~~G-~iP~~~~~l~~L~~l~l~~n~~~g~~p~ 232 (721)
++|.+++ .+|..++++++|++|+|++|.+++..|.
T Consensus 136 ~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~ 171 (606)
T 3vq2_A 136 AHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVN 171 (606)
T ss_dssp CSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTT
T ss_pred CCCcccceechHhHhhcCCCCEEEccCCcceecChh
Confidence 9999986 8899999999999999999999986554
No 313
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.20 E-value=1.9e-11 Score=116.33 Aligned_cols=108 Identities=19% Similarity=0.158 Sum_probs=97.6
Q ss_pred CcEEEEEeCCCCCCCcCchhhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccCccccc-CCccccCCCCCCEEE
Q 004979 118 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGP-FPSDFGNSFSLTTLL 196 (721)
Q Consensus 118 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N~l~G~-iP~~~~~~~~L~~l~ 196 (721)
.++..|+|++|.+.+. ..+..+++|++|+|++|.+++.+|..+.++++|++|+|++|++++. .+..+..+++|++|+
T Consensus 49 ~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~~l~~L~~L~ 126 (168)
T 2ell_A 49 VNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNLSGNKLKDISTLEPLKKLECLKSLD 126 (168)
T ss_dssp GGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEECBSSSCCSSGGGGGGSSCSCCCEEE
T ss_pred CCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEeccCCccCcchhHHHHhcCCCCCEEE
Confidence 4788999999999886 7899999999999999999999998888899999999999999973 337899999999999
Q ss_pred CccCCCCcCCC---hhccCCCCCCEEEccCCCCC
Q 004979 197 LDNNQYLGGIS---PELHVLKVISEIQVDESWLT 227 (721)
Q Consensus 197 l~~N~~~G~iP---~~~~~l~~L~~l~l~~n~~~ 227 (721)
+++|.+++..+ ..+..+++|++|+++.|.+.
T Consensus 127 l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 127 LFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp CCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred eeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 99999997655 47899999999999999876
No 314
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.20 E-value=4e-11 Score=133.09 Aligned_cols=123 Identities=20% Similarity=0.131 Sum_probs=106.9
Q ss_pred eeeEEeCC-----------CcEEEEEeCCCCCCCcCchhhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccCcc
Q 004979 110 WFGVECSD-----------GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNF 178 (721)
Q Consensus 110 w~gv~C~~-----------~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N~l 178 (721)
|..|.|.. ..++.|+|++|.+.+..|..+.++++|++|+|++|.+++..|..+.++++|+.|+|++|++
T Consensus 56 ~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l 135 (452)
T 3zyi_A 56 FSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWL 135 (452)
T ss_dssp SCEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred CcEEEECCCCcCccCCCCCCCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcC
Confidence 67888963 2578999999999998888999999999999999999998889999999999999999999
Q ss_pred cccCCccccCCCCCCEEECccCCCCcCCChhccCCCCCCEEEccCCCCCCcccc
Q 004979 179 SGPFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLTNAASR 232 (721)
Q Consensus 179 ~G~iP~~~~~~~~L~~l~l~~N~~~G~iP~~~~~l~~L~~l~l~~n~~~g~~p~ 232 (721)
++..+..+.++++|++|+|++|.+++-.+..+.++++|+.|+|++|+.-+.++.
T Consensus 136 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~ 189 (452)
T 3zyi_A 136 TVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISE 189 (452)
T ss_dssp SBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECT
T ss_pred CccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccCh
Confidence 976666789999999999999999865555788888999999988666666654
No 315
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.20 E-value=2.3e-11 Score=127.48 Aligned_cols=116 Identities=18% Similarity=0.260 Sum_probs=104.8
Q ss_pred CcEEEEEeCCCCCCCcCchhhcCCCCCCEEEccCCcccc-cCchhhcCCCCCCEeEcccCcccccCCccccCCCCCCEEE
Q 004979 118 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFG-TIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLL 196 (721)
Q Consensus 118 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~l~G-~ip~~l~~l~~L~~l~ls~N~l~G~iP~~~~~~~~L~~l~ 196 (721)
.++..|+|++|.+.+.++..+..+++|++|+|++|.+.+ .+|..+..+++|+.|+|++|++++..|..+..+++|+.|+
T Consensus 126 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 205 (306)
T 2z66_A 126 RNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLN 205 (306)
T ss_dssp TTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred cCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEE
Confidence 478899999999998888889999999999999999988 6788899999999999999999988888999999999999
Q ss_pred CccCCCCcCCChhccCCCCCCEEEccCCCCCCccccc
Q 004979 197 LDNNQYLGGISPELHVLKVISEIQVDESWLTNAASRA 233 (721)
Q Consensus 197 l~~N~~~G~iP~~~~~l~~L~~l~l~~n~~~g~~p~~ 233 (721)
|++|.+++..+..+..+++|+.|+|++|.+++..|..
T Consensus 206 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 242 (306)
T 2z66_A 206 MSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQE 242 (306)
T ss_dssp CTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSS
T ss_pred CCCCccCccChhhccCcccCCEeECCCCCCcccCHHH
Confidence 9999999877778889999999999999999877653
No 316
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.20 E-value=4.1e-11 Score=133.82 Aligned_cols=124 Identities=19% Similarity=0.165 Sum_probs=110.6
Q ss_pred ceeeEEeCC-----------CcEEEEEeCCCCCCCcCchhhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccCc
Q 004979 109 SWFGVECSD-----------GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNN 177 (721)
Q Consensus 109 ~w~gv~C~~-----------~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N~ 177 (721)
.|..|.|.. ..++.|+|++|.+.+..+..+.++++|++|+|++|.+++..|..++++++|++|+|++|+
T Consensus 12 ~~~~v~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~ 91 (477)
T 2id5_A 12 QDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNR 91 (477)
T ss_dssp TTTEEECCSCCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred CCCEEEeCCCCcCcCCCCCCCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCc
Confidence 377899963 257899999999999888899999999999999999999989999999999999999999
Q ss_pred ccccCCccccCCCCCCEEECccCCCCcCCChhccCCCCCCEEEccCCCCCCcccc
Q 004979 178 FSGPFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLTNAASR 232 (721)
Q Consensus 178 l~G~iP~~~~~~~~L~~l~l~~N~~~G~iP~~~~~l~~L~~l~l~~n~~~g~~p~ 232 (721)
+++..+..+.++++|++|+|++|.+++.+|..+..+++|+.|+|++|.+++..|.
T Consensus 92 l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 146 (477)
T 2id5_A 92 LKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHR 146 (477)
T ss_dssp CCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTT
T ss_pred CCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChh
Confidence 9965555688999999999999999999999999999999999999999875543
No 317
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.19 E-value=4.9e-11 Score=128.38 Aligned_cols=110 Identities=20% Similarity=0.154 Sum_probs=100.0
Q ss_pred CcEEEEEeCCCCCCCcCchhhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccCcccccCCccccCCCCCCEEEC
Q 004979 118 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 197 (721)
Q Consensus 118 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N~l~G~iP~~~~~~~~L~~l~l 197 (721)
.++..|+|++|.+++..+..+..+++|++|+|++|.|.+..+..+..+++|+.|+|++|++++..|..+.++++|+.|+|
T Consensus 64 ~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L 143 (361)
T 2xot_A 64 TNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYL 143 (361)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred cccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEEC
Confidence 57899999999999877778999999999999999999877778999999999999999999888999999999999999
Q ss_pred ccCCCCcCCChhc----cCCCCCCEEEccCCCCCC
Q 004979 198 DNNQYLGGISPEL----HVLKVISEIQVDESWLTN 228 (721)
Q Consensus 198 ~~N~~~G~iP~~~----~~l~~L~~l~l~~n~~~g 228 (721)
++|++++ +|..+ ..+++|+.|+|++|.|++
T Consensus 144 ~~N~l~~-l~~~~~~~~~~l~~L~~L~L~~N~l~~ 177 (361)
T 2xot_A 144 SQNQISR-FPVELIKDGNKLPKLMLLDLSSNKLKK 177 (361)
T ss_dssp CSSCCCS-CCGGGTC----CTTCCEEECCSSCCCC
T ss_pred CCCcCCe-eCHHHhcCcccCCcCCEEECCCCCCCc
Confidence 9999986 67665 579999999999999995
No 318
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.18 E-value=3.6e-11 Score=137.20 Aligned_cols=115 Identities=17% Similarity=0.152 Sum_probs=101.1
Q ss_pred CcEEEEEeCCCCCCCcCc-hhhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccCccc-ccCCccccCCCCCCEE
Q 004979 118 GKVVILNLRDLCLGGMLA-PELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFS-GPFPSDFGNSFSLTTL 195 (721)
Q Consensus 118 ~~v~~l~L~~~~l~G~ip-~~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N~l~-G~iP~~~~~~~~L~~l 195 (721)
..+..|+|++|.+.+..| ..+..+++|++|+|++|.+.+.+|..+..+++|+.|+|++|.++ |.+|..+..+++|++|
T Consensus 396 ~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L 475 (570)
T 2z63_A 396 EQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFL 475 (570)
T ss_dssp TTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEE
T ss_pred CCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEE
Confidence 467788999999888776 45788999999999999999999988999999999999999998 6899899999999999
Q ss_pred ECccCCCCcCCChhccCCCCCCEEEccCCCCCCcccc
Q 004979 196 LLDNNQYLGGISPELHVLKVISEIQVDESWLTNAASR 232 (721)
Q Consensus 196 ~l~~N~~~G~iP~~~~~l~~L~~l~l~~n~~~g~~p~ 232 (721)
++++|++++.+|..+..+++|+.|+|++|.+++..|.
T Consensus 476 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 512 (570)
T 2z63_A 476 DLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDG 512 (570)
T ss_dssp ECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTT
T ss_pred ECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHH
Confidence 9999999998898999999999999999999876553
No 319
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.18 E-value=7.5e-11 Score=122.88 Aligned_cols=108 Identities=21% Similarity=0.094 Sum_probs=60.1
Q ss_pred cEEEEEeCCCCCCCcCchhhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccCcccccCCccccCCCCCCEEECc
Q 004979 119 KVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLD 198 (721)
Q Consensus 119 ~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N~l~G~iP~~~~~~~~L~~l~l~ 198 (721)
.+..|+|++|.+. .+|..+..+++|++|+|++|.+++..|..+..+++|+.|+|++|++++..|..+..+++|+.|+|+
T Consensus 78 ~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 156 (290)
T 1p9a_G 78 VLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLA 156 (290)
T ss_dssp TCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECT
T ss_pred cCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECC
Confidence 4555556655554 455555556666666666666655444555556666666666666654433444555666666666
Q ss_pred cCCCCcCCChhccCCCCCCEEEccCCCCC
Q 004979 199 NNQYLGGISPELHVLKVISEIQVDESWLT 227 (721)
Q Consensus 199 ~N~~~G~iP~~~~~l~~L~~l~l~~n~~~ 227 (721)
+|++++-.+..+..+++|+.|+|++|.++
T Consensus 157 ~N~l~~l~~~~~~~l~~L~~L~L~~N~l~ 185 (290)
T 1p9a_G 157 NNNLTELPAGLLNGLENLDTLLLQENSLY 185 (290)
T ss_dssp TSCCSCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred CCcCCccCHHHhcCcCCCCEEECCCCcCC
Confidence 66655322223345566666666666655
No 320
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.17 E-value=6.7e-11 Score=138.19 Aligned_cols=114 Identities=21% Similarity=0.195 Sum_probs=91.0
Q ss_pred cEEEEEeCCCCCCCcCchhhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccCcccccCCccccCCCCCCEEECc
Q 004979 119 KVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLD 198 (721)
Q Consensus 119 ~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N~l~G~iP~~~~~~~~L~~l~l~ 198 (721)
+++.|+|++|.+.+..+..++++++|++|+|++|.+++..|..++++++|++|+|++|++++-.+..++++++|++|+|+
T Consensus 26 ~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~ 105 (680)
T 1ziw_A 26 NITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLM 105 (680)
T ss_dssp TCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECC
T ss_pred CCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEECC
Confidence 67888888888888777778888888888888888888888888888888888888888885333457888888888888
Q ss_pred cCCCCcCCChhccCCCCCCEEEccCCCCCCcccc
Q 004979 199 NNQYLGGISPELHVLKVISEIQVDESWLTNAASR 232 (721)
Q Consensus 199 ~N~~~G~iP~~~~~l~~L~~l~l~~n~~~g~~p~ 232 (721)
+|++++-.|..++++++|++|+|++|.+++..|.
T Consensus 106 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~ 139 (680)
T 1ziw_A 106 SNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLG 139 (680)
T ss_dssp SSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCC
T ss_pred CCccCccChhHccccCCCCEEECCCCcccccCch
Confidence 8888766666788888888888888888776554
No 321
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.16 E-value=8.9e-11 Score=124.65 Aligned_cols=118 Identities=22% Similarity=0.308 Sum_probs=106.2
Q ss_pred CceeeEEeCC-----------CcEEEEEeCCCCCCCcCchhhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccC
Q 004979 108 CSWFGVECSD-----------GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFN 176 (721)
Q Consensus 108 C~w~gv~C~~-----------~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N 176 (721)
|+|..+.|.. ..++.|+|++|.+.+..|..+.++++|++|+|++|.+++..|..++++++|++|+|++|
T Consensus 33 c~l~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 112 (332)
T 2ft3_A 33 CHLRVVQCSDLGLKAVPKEISPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKN 112 (332)
T ss_dssp EETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSS
T ss_pred ccCCEEECCCCCccccCCCCCCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCC
Confidence 7899999962 25789999999999877778999999999999999999998999999999999999999
Q ss_pred cccccCCccccCCCCCCEEECccCCCCcCCChhccCCCCCCEEEccCCCCCC
Q 004979 177 NFSGPFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLTN 228 (721)
Q Consensus 177 ~l~G~iP~~~~~~~~L~~l~l~~N~~~G~iP~~~~~l~~L~~l~l~~n~~~g 228 (721)
+++ .+|..+. ++|++|++++|++++-.+..+..+++|+.|++++|.++.
T Consensus 113 ~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~ 161 (332)
T 2ft3_A 113 HLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLEN 161 (332)
T ss_dssp CCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBG
T ss_pred cCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCcccc
Confidence 998 7888776 899999999999986655668999999999999999973
No 322
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.16 E-value=5.1e-11 Score=113.77 Aligned_cols=100 Identities=27% Similarity=0.271 Sum_probs=88.8
Q ss_pred CceeeEEeCC-----------CcEEEEEeCCCCCCCcCchhhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccC
Q 004979 108 CSWFGVECSD-----------GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFN 176 (721)
Q Consensus 108 C~w~gv~C~~-----------~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N 176 (721)
|+|..+.|.. ..+..|+|++|.+++..|..+..+++|++|+|++|.|++..|..+..+++|++|+|++|
T Consensus 9 C~~~~l~~s~n~l~~ip~~~~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 9 CSGTTVDCSGKSLASVPTGIPTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp EETTEEECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cCCCEEEeCCCCcCccCccCCCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 7899999963 25778999999999988989999999999999999999766666799999999999999
Q ss_pred cccccCCccccCCCCCCEEECccCCCCcCCC
Q 004979 177 NFSGPFPSDFGNSFSLTTLLLDNNQYLGGIS 207 (721)
Q Consensus 177 ~l~G~iP~~~~~~~~L~~l~l~~N~~~G~iP 207 (721)
+|++..|..+.++++|++|+|++|.+++..+
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 9997666679999999999999999987654
No 323
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.16 E-value=7e-11 Score=134.92 Aligned_cols=108 Identities=19% Similarity=0.191 Sum_probs=100.1
Q ss_pred CcEEEEEeCCCCCCCcCchhhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccCcccccCCccccCCCCCCEEEC
Q 004979 118 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 197 (721)
Q Consensus 118 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N~l~G~iP~~~~~~~~L~~l~l 197 (721)
.+++.|+|++|.+.+..|..+.++++|++|+|++|.+++..|..++++++|++|||++|+++ .||.. .+++|++|+|
T Consensus 52 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L 128 (562)
T 3a79_B 52 PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASLRHLDL 128 (562)
T ss_dssp TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTTCSEEEC
T ss_pred CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccccCCEEEC
Confidence 47889999999999888889999999999999999999988999999999999999999999 78877 8999999999
Q ss_pred ccCCCCc-CCChhccCCCCCCEEEccCCCCCC
Q 004979 198 DNNQYLG-GISPELHVLKVISEIQVDESWLTN 228 (721)
Q Consensus 198 ~~N~~~G-~iP~~~~~l~~L~~l~l~~n~~~g 228 (721)
++|++++ ++|..++++++|++|+|++|.+++
T Consensus 129 s~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~ 160 (562)
T 3a79_B 129 SFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQ 160 (562)
T ss_dssp CSSCCSBCCCCGGGGGCTTCCEEEEECSBCCT
T ss_pred CCCCccccCchHhhcccCcccEEecCCCcccc
Confidence 9999988 788899999999999999999886
No 324
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.16 E-value=8.1e-11 Score=135.74 Aligned_cols=115 Identities=15% Similarity=0.135 Sum_probs=104.3
Q ss_pred CcEEEEEeCCCCCCCcCchhhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccCcccccCCccccCCCCCCEEEC
Q 004979 118 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 197 (721)
Q Consensus 118 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N~l~G~iP~~~~~~~~L~~l~l 197 (721)
.+++.|+|++|.+++-.|..|.+|++|++|+|++|.|++-.|..+.+|++|++|+|++|++++-.|..++++++|++|+|
T Consensus 76 ~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~L 155 (635)
T 4g8a_A 76 PELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNV 155 (635)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEEC
T ss_pred CCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeecc
Confidence 47899999999999866777999999999999999999877778999999999999999999766667999999999999
Q ss_pred ccCCCCc-CCChhccCCCCCCEEEccCCCCCCcccc
Q 004979 198 DNNQYLG-GISPELHVLKVISEIQVDESWLTNAASR 232 (721)
Q Consensus 198 ~~N~~~G-~iP~~~~~l~~L~~l~l~~n~~~g~~p~ 232 (721)
++|.+++ .+|..++.+++|++|+|++|.+++-.|.
T Consensus 156 s~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 191 (635)
T 4g8a_A 156 AHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCT 191 (635)
T ss_dssp CSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGG
T ss_pred ccCccccCCCchhhccchhhhhhcccCccccccccc
Confidence 9999976 6889999999999999999999976554
No 325
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.15 E-value=6.3e-11 Score=136.42 Aligned_cols=114 Identities=12% Similarity=0.072 Sum_probs=105.0
Q ss_pred cEEEEEeCCCCCCCcCchhhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccCcccccCCccccCCCCCCEEECc
Q 004979 119 KVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLD 198 (721)
Q Consensus 119 ~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N~l~G~iP~~~~~~~~L~~l~l~ 198 (721)
.++.|+|++|.+++..|..++++++|++|+|++|.+.+..|..++++++|++|+|++|++++..|..++++++|++|+|+
T Consensus 34 ~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 113 (606)
T 3t6q_A 34 STECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFI 113 (606)
T ss_dssp TCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEECT
T ss_pred cCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeecc
Confidence 68899999999998888899999999999999999999889999999999999999999999999999999999999999
Q ss_pred cCCCCcCCChhccCCCCCCEEEccCCCCCC-cccc
Q 004979 199 NNQYLGGISPELHVLKVISEIQVDESWLTN-AASR 232 (721)
Q Consensus 199 ~N~~~G~iP~~~~~l~~L~~l~l~~n~~~g-~~p~ 232 (721)
+|.+++-.|..++.+++|++|+|++|.+++ .+|.
T Consensus 114 ~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 148 (606)
T 3t6q_A 114 QTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPK 148 (606)
T ss_dssp TSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCT
T ss_pred ccCcccCCcchhccCCcccEEECCCCcccccCccc
Confidence 999998667778999999999999999987 3343
No 326
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.15 E-value=1.6e-10 Score=119.03 Aligned_cols=112 Identities=21% Similarity=0.198 Sum_probs=82.0
Q ss_pred CcEEEEEeCCCCCCCcCchhhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccCcccccCCccccCCCCCCEEEC
Q 004979 118 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 197 (721)
Q Consensus 118 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N~l~G~iP~~~~~~~~L~~l~l 197 (721)
.++..|+|++|.+++-.+..+..+++|++|+|++|.+.+..+..+..+++|+.|+|++|++++..|..+.++++|++|+|
T Consensus 61 ~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L 140 (270)
T 2o6q_A 61 TKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSL 140 (270)
T ss_dssp TTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEEC
Confidence 36777888888777433334567888888888888887655556677888888888888887766666777888888888
Q ss_pred ccCCCCcCCChhccCCCCCCEEEccCCCCCCc
Q 004979 198 DNNQYLGGISPELHVLKVISEIQVDESWLTNA 229 (721)
Q Consensus 198 ~~N~~~G~iP~~~~~l~~L~~l~l~~n~~~g~ 229 (721)
++|.+++-.+..+..+++|+.|+|++|.+++-
T Consensus 141 s~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 172 (270)
T 2o6q_A 141 GYNELQSLPKGVFDKLTSLKELRLYNNQLKRV 172 (270)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCCcCCccCHhHccCCcccceeEecCCcCcEe
Confidence 88887764444567788888888888877753
No 327
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.14 E-value=8.6e-11 Score=118.55 Aligned_cols=109 Identities=12% Similarity=0.117 Sum_probs=96.6
Q ss_pred CcEEEEEeCCCCCCCcCchhhcCCCCCCEEEccCCc-ccccCchhhcCCCCCCEeEccc-CcccccCCccccCCCCCCEE
Q 004979 118 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNS-FFGTIPKEIGELKELEILDLGF-NNFSGPFPSDFGNSFSLTTL 195 (721)
Q Consensus 118 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~-l~G~ip~~l~~l~~L~~l~ls~-N~l~G~iP~~~~~~~~L~~l 195 (721)
..++.|+|++|.+.+..+..+..+++|++|+|++|. +++-.+..+.++++|+.|+|++ |++++-.|..+.++++|++|
T Consensus 31 ~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L 110 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFL 110 (239)
T ss_dssp TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEE
T ss_pred CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEE
Confidence 468899999999998777789999999999999997 7755555889999999999999 99997666788999999999
Q ss_pred ECccCCCCcCCChhccCCCCCC---EEEccCC-CCCC
Q 004979 196 LLDNNQYLGGISPELHVLKVIS---EIQVDES-WLTN 228 (721)
Q Consensus 196 ~l~~N~~~G~iP~~~~~l~~L~---~l~l~~n-~~~g 228 (721)
++++|.+++ +|. +..+.+|+ .|++++| .+++
T Consensus 111 ~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~ 145 (239)
T 2xwt_C 111 GIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTS 145 (239)
T ss_dssp EEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCE
T ss_pred eCCCCCCcc-ccc-cccccccccccEEECCCCcchhh
Confidence 999999998 887 88888888 9999999 8875
No 328
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.14 E-value=1e-11 Score=130.90 Aligned_cols=108 Identities=18% Similarity=0.234 Sum_probs=88.5
Q ss_pred EEEeCCCCC-CCcCchhhc-------CCCCCCEEEccCCcccccCchhh--cCCCCCCEeEcccCcccccCCccccCC--
Q 004979 122 ILNLRDLCL-GGMLAPELG-------QLSELKSIILRNNSFFGTIPKEI--GELKELEILDLGFNNFSGPFPSDFGNS-- 189 (721)
Q Consensus 122 ~l~L~~~~l-~G~ip~~l~-------~l~~L~~L~L~~n~l~G~ip~~l--~~l~~L~~l~ls~N~l~G~iP~~~~~~-- 189 (721)
.|+|++|.+ .+.+|..+. ++++|++|+|++|.++|.+|..+ +.+++|++|+|++|++++. |..++.+
T Consensus 67 ~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~ 145 (312)
T 1wwl_A 67 SLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQ 145 (312)
T ss_dssp HCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHT
T ss_pred hcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHH
Confidence 345555555 355666555 78899999999999999998876 8899999999999999887 8777766
Q ss_pred ---CCCCEEECccCCCCcCCChhccCCCCCCEEEccCCCCCCcc
Q 004979 190 ---FSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLTNAA 230 (721)
Q Consensus 190 ---~~L~~l~l~~N~~~G~iP~~~~~l~~L~~l~l~~n~~~g~~ 230 (721)
++|++|+|++|++++..|..++.+++|++|+|++|.++|.+
T Consensus 146 ~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 189 (312)
T 1wwl_A 146 WLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGER 189 (312)
T ss_dssp TCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHH
T ss_pred hhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcch
Confidence 88999999999998888888999999999999999988763
No 329
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.14 E-value=3.6e-11 Score=136.65 Aligned_cols=116 Identities=22% Similarity=0.248 Sum_probs=107.2
Q ss_pred CcEEEEEeCCCCCCCcCchhhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccCcccc-cCCccccCCCCCCEEE
Q 004979 118 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSG-PFPSDFGNSFSLTTLL 196 (721)
Q Consensus 118 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N~l~G-~iP~~~~~~~~L~~l~ 196 (721)
.+++.|+|++|.+.+..|..++.+++|++|+|++|.+++..|..++++++|++|+|++|.+++ .+|..++++++|++|+
T Consensus 50 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~ 129 (549)
T 2z81_A 50 ANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLR 129 (549)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEE
T ss_pred CcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEE
Confidence 578999999999999888899999999999999999999888889999999999999999997 6788999999999999
Q ss_pred CccCCCCcCCC-hhccCCCCCCEEEccCCCCCCccccc
Q 004979 197 LDNNQYLGGIS-PELHVLKVISEIQVDESWLTNAASRA 233 (721)
Q Consensus 197 l~~N~~~G~iP-~~~~~l~~L~~l~l~~n~~~g~~p~~ 233 (721)
+++|.+.+.+| ..+..+++|++|++++|.+++.+|..
T Consensus 130 L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 167 (549)
T 2z81_A 130 IGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQS 167 (549)
T ss_dssp EEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTT
T ss_pred CCCCccccccCHhhhhcccccCeeeccCCcccccChhh
Confidence 99999888887 47999999999999999999887753
No 330
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.14 E-value=1.3e-10 Score=121.16 Aligned_cols=108 Identities=21% Similarity=0.163 Sum_probs=95.8
Q ss_pred cEEEEEeCCCCCCCcCchhhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccCcccccCCccccCCCCCCEEECc
Q 004979 119 KVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLD 198 (721)
Q Consensus 119 ~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N~l~G~iP~~~~~~~~L~~l~l~ 198 (721)
.++.|+|++|.+++..+..+..+++|++|+|++|.+++. |.. +.+++|+.|+|++|+++ .+|..+..+++|++|+|+
T Consensus 32 ~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~~-~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~ 108 (290)
T 1p9a_G 32 DTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKL-QVD-GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVS 108 (290)
T ss_dssp TCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEE-ECC-SCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECC
T ss_pred CCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcc-cCC-CCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECC
Confidence 578999999999988888899999999999999999864 433 78999999999999998 789888999999999999
Q ss_pred cCCCCcCCChhccCCCCCCEEEccCCCCCCc
Q 004979 199 NNQYLGGISPELHVLKVISEIQVDESWLTNA 229 (721)
Q Consensus 199 ~N~~~G~iP~~~~~l~~L~~l~l~~n~~~g~ 229 (721)
+|++++-.|..+..+++|+.|+|++|.+++-
T Consensus 109 ~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~ 139 (290)
T 1p9a_G 109 FNRLTSLPLGALRGLGELQELYLKGNELKTL 139 (290)
T ss_dssp SSCCCCCCSSTTTTCTTCCEEECTTSCCCCC
T ss_pred CCcCcccCHHHHcCCCCCCEEECCCCCCCcc
Confidence 9999977777889999999999999999854
No 331
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.13 E-value=2.6e-10 Score=109.36 Aligned_cols=106 Identities=18% Similarity=0.164 Sum_probs=91.6
Q ss_pred EEEEeCCCCCCCcCchhhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccCcccccCCccccCCCCCCEEECccC
Q 004979 121 VILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLDNN 200 (721)
Q Consensus 121 ~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N~l~G~iP~~~~~~~~L~~l~l~~N 200 (721)
..++++++++.. +|..+ .++|+.|+|++|.+.+..+..++.+++|+.|+|++|++++..|..+.++++|++|+|++|
T Consensus 10 ~~l~~~~~~l~~-~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 86 (177)
T 2o6r_A 10 TEIRCNSKGLTS-VPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHEN 86 (177)
T ss_dssp TEEECCSSCCSS-CCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCCcc-CCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCC
Confidence 478899998864 55444 479999999999999766667899999999999999999766666899999999999999
Q ss_pred CCCcCCChhccCCCCCCEEEccCCCCCCc
Q 004979 201 QYLGGISPELHVLKVISEIQVDESWLTNA 229 (721)
Q Consensus 201 ~~~G~iP~~~~~l~~L~~l~l~~n~~~g~ 229 (721)
++++-.+..+..+++|+.|+|++|.+++-
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 115 (177)
T 2o6r_A 87 KLQSLPNGVFDKLTQLKELALDTNQLKSV 115 (177)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CccccCHHHhhCCcccCEEECcCCcceEe
Confidence 99987777789999999999999999953
No 332
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.13 E-value=8.5e-11 Score=132.73 Aligned_cols=110 Identities=19% Similarity=0.163 Sum_probs=53.5
Q ss_pred EEEEEeCCCCCCCcCchhhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccCcccc--cCCccccCCCCCCEEEC
Q 004979 120 VVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSG--PFPSDFGNSFSLTTLLL 197 (721)
Q Consensus 120 v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N~l~G--~iP~~~~~~~~L~~l~l 197 (721)
+..|+|++|.+.+..- ...+++|++|+|++|.+++.+|..++++++|+.|+|++|++++ .+|..++.+++|++|++
T Consensus 304 L~~L~l~~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~L 381 (520)
T 2z7x_B 304 IKNFTVSGTRMVHMLC--PSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDI 381 (520)
T ss_dssp CSEEEEESSCCCCCCC--CSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEEC
T ss_pred eeEEEcCCCccccccc--hhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEEC
Confidence 4445555554433210 1344455555555555555555555555555555555555554 44444555555555555
Q ss_pred ccCCCCcCCChh-ccCCCCCCEEEccCCCCCCccc
Q 004979 198 DNNQYLGGISPE-LHVLKVISEIQVDESWLTNAAS 231 (721)
Q Consensus 198 ~~N~~~G~iP~~-~~~l~~L~~l~l~~n~~~g~~p 231 (721)
++|.+++.+|.. +..+++|+.|+|++|.+++.+|
T Consensus 382 s~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~ 416 (520)
T 2z7x_B 382 SQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIF 416 (520)
T ss_dssp CSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGG
T ss_pred CCCcCCcccccchhccCccCCEEECcCCCCCcchh
Confidence 555555544443 3444555555555555554444
No 333
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.13 E-value=1.4e-10 Score=122.88 Aligned_cols=119 Identities=22% Similarity=0.309 Sum_probs=103.7
Q ss_pred CCceeeEEeCC-----------CcEEEEEeCCCCCCCcCchhhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEccc
Q 004979 107 PCSWFGVECSD-----------GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGF 175 (721)
Q Consensus 107 ~C~w~gv~C~~-----------~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~ 175 (721)
.|+|..+.|.. ..++.|+|++|.+.+..+..++++++|++|+|++|.+++..|..++++++|++|+|++
T Consensus 30 ~c~l~~l~~~~~~l~~lp~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~ 109 (330)
T 1xku_A 30 QCHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSK 109 (330)
T ss_dssp EEETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred cCCCeEEEecCCCccccCccCCCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCC
Confidence 37899999962 2578899999999987777899999999999999999998899999999999999999
Q ss_pred CcccccCCccccCCCCCCEEECccCCCCcCCChhccCCCCCCEEEccCCCCCC
Q 004979 176 NNFSGPFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLTN 228 (721)
Q Consensus 176 N~l~G~iP~~~~~~~~L~~l~l~~N~~~G~iP~~~~~l~~L~~l~l~~n~~~g 228 (721)
|+++ .+|..+. ++|++|++++|.+++-.+..+..+++|+.|++++|.++.
T Consensus 110 n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 159 (330)
T 1xku_A 110 NQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKS 159 (330)
T ss_dssp SCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCG
T ss_pred CcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCc
Confidence 9998 7887665 689999999998887777778888889999998888863
No 334
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.13 E-value=5.5e-11 Score=133.28 Aligned_cols=111 Identities=18% Similarity=0.213 Sum_probs=99.4
Q ss_pred CcEEEEEeCCCCCCCcCchhhc-CCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccCcccccCCccccCCCCCCEEE
Q 004979 118 GKVVILNLRDLCLGGMLAPELG-QLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLL 196 (721)
Q Consensus 118 ~~v~~l~L~~~~l~G~ip~~l~-~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N~l~G~iP~~~~~~~~L~~l~ 196 (721)
.++..|+|++|.++|.+|..+. .+++|+.|+|++|.|++. | .+..+++|+.|+|++|.++| +|+.+..+++|+.|+
T Consensus 144 ~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~ 220 (487)
T 3oja_A 144 SRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-K-GQVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWIS 220 (487)
T ss_dssp SSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-E-CCCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEE
T ss_pred CCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc-c-ccccCCCCCEEECCCCCCCC-CCHhHcCCCCccEEE
Confidence 5799999999999999998886 899999999999999987 3 34579999999999999997 566699999999999
Q ss_pred CccCCCCcCCChhccCCCCCCEEEccCCCCC-Ccccc
Q 004979 197 LDNNQYLGGISPELHVLKVISEIQVDESWLT-NAASR 232 (721)
Q Consensus 197 l~~N~~~G~iP~~~~~l~~L~~l~l~~n~~~-g~~p~ 232 (721)
|++|.+++ ||..++.+++|+.|++++|.++ +.+|.
T Consensus 221 Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~ 256 (487)
T 3oja_A 221 LRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRD 256 (487)
T ss_dssp CTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHH
T ss_pred ecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHH
Confidence 99999996 8999999999999999999998 54443
No 335
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.13 E-value=8.3e-11 Score=140.94 Aligned_cols=115 Identities=21% Similarity=0.205 Sum_probs=96.4
Q ss_pred CcEEEEEeCCCCCCCcC-chhhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccCcccccCCcc--ccCCCCCCE
Q 004979 118 GKVVILNLRDLCLGGML-APELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSD--FGNSFSLTT 194 (721)
Q Consensus 118 ~~v~~l~L~~~~l~G~i-p~~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N~l~G~iP~~--~~~~~~L~~ 194 (721)
..++.|+|++|.+.+.| |..+.+|++|++|+|++|.+.+..|..++++++|++|+|++|.+++.+|.. ++++++|++
T Consensus 48 ~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~ 127 (844)
T 3j0a_A 48 EQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTR 127 (844)
T ss_dssp CSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCE
T ss_pred ccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCE
Confidence 46788888888888888 456888899999999999998888888888999999999999998887765 888889999
Q ss_pred EECccCCCCcCCC-hhccCCCCCCEEEccCCCCCCcccc
Q 004979 195 LLLDNNQYLGGIS-PELHVLKVISEIQVDESWLTNAASR 232 (721)
Q Consensus 195 l~l~~N~~~G~iP-~~~~~l~~L~~l~l~~n~~~g~~p~ 232 (721)
|+|++|.+++..| ..++++++|++|+|++|.+++..+.
T Consensus 128 L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~ 166 (844)
T 3j0a_A 128 LDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEH 166 (844)
T ss_dssp EEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSG
T ss_pred EECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHH
Confidence 9999998887655 5788888999999988888876554
No 336
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.12 E-value=3.8e-12 Score=149.56 Aligned_cols=113 Identities=21% Similarity=0.218 Sum_probs=103.0
Q ss_pred CcEEEEEeCCCCCCCcCchhhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccCcccccCCccccCCCCCCEEEC
Q 004979 118 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 197 (721)
Q Consensus 118 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N~l~G~iP~~~~~~~~L~~l~l 197 (721)
.++..|+|++|.|+ .||..|++|++|++|+|++|.|+ .||..+++|++|++|+|++|.|+ .||..|+++++|++|+|
T Consensus 247 ~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L 323 (727)
T 4b8c_D 247 DFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGV 323 (727)
T ss_dssp CSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEEC
T ss_pred CCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeC
Confidence 46889999999999 89999999999999999999999 89999999999999999999997 89999999999999999
Q ss_pred ccCCCCcCCChhccCCCCC-CEEEccCCCCCCccccc
Q 004979 198 DNNQYLGGISPELHVLKVI-SEIQVDESWLTNAASRA 233 (721)
Q Consensus 198 ~~N~~~G~iP~~~~~l~~L-~~l~l~~n~~~g~~p~~ 233 (721)
++|.|+|.+|..+..+..+ ..|+|++|.++|.+|..
T Consensus 324 ~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~ 360 (727)
T 4b8c_D 324 EGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE 360 (727)
T ss_dssp TTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_pred CCCccCCCChHHHhhcchhhhHHhhccCcccCcCccc
Confidence 9999999999888664322 24789999999999874
No 337
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.11 E-value=1e-10 Score=112.14 Aligned_cols=105 Identities=21% Similarity=0.186 Sum_probs=90.2
Q ss_pred CcEEEEEeCCCCCCCcCchhhcCCC-CCCEEEccCCcccccCchhhcCCCCCCEeEcccCcccccCCcc-ccCCCCCCEE
Q 004979 118 GKVVILNLRDLCLGGMLAPELGQLS-ELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSD-FGNSFSLTTL 195 (721)
Q Consensus 118 ~~v~~l~L~~~~l~G~ip~~l~~l~-~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N~l~G~iP~~-~~~~~~L~~l 195 (721)
..++.|+|++|.+.. +| .+..+. +|++|+|++|.+++. ..++.+++|+.|+|++|++++ +|+. +..+++|++|
T Consensus 19 ~~L~~L~l~~n~l~~-i~-~~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L 93 (176)
T 1a9n_A 19 VRDRELDLRGYKIPV-IE-NLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICR-IGEGLDQALPDLTEL 93 (176)
T ss_dssp TSCEEEECTTSCCCS-CC-CGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCE-ECSCHHHHCTTCCEE
T ss_pred CCceEEEeeCCCCch-hH-HhhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccc-cCcchhhcCCCCCEE
Confidence 468899999999984 54 465555 999999999999975 678999999999999999995 5544 4899999999
Q ss_pred ECccCCCCcCCCh--hccCCCCCCEEEccCCCCCC
Q 004979 196 LLDNNQYLGGISP--ELHVLKVISEIQVDESWLTN 228 (721)
Q Consensus 196 ~l~~N~~~G~iP~--~~~~l~~L~~l~l~~n~~~g 228 (721)
+|++|.+ +.+|. .+..+++|+.|+|++|.++.
T Consensus 94 ~L~~N~i-~~~~~~~~l~~l~~L~~L~l~~N~i~~ 127 (176)
T 1a9n_A 94 ILTNNSL-VELGDLDPLASLKSLTYLCILRNPVTN 127 (176)
T ss_dssp ECCSCCC-CCGGGGGGGGGCTTCCEEECCSSGGGG
T ss_pred ECCCCcC-CcchhhHhhhcCCCCCEEEecCCCCCC
Confidence 9999998 56887 88999999999999999873
No 338
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.11 E-value=8e-11 Score=134.44 Aligned_cols=94 Identities=20% Similarity=0.123 Sum_probs=60.9
Q ss_pred cCCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccCcccc--cCCccccCCCCCCEEECccCCCCcCCChh-ccCCCC
Q 004979 139 GQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSG--PFPSDFGNSFSLTTLLLDNNQYLGGISPE-LHVLKV 215 (721)
Q Consensus 139 ~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N~l~G--~iP~~~~~~~~L~~l~l~~N~~~G~iP~~-~~~l~~ 215 (721)
..+++|++|+|++|.+++.+|..++++++|+.|+|++|++++ .+|..+.++++|++|+|++|++++.+|.. +..+++
T Consensus 350 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~ 429 (562)
T 3a79_B 350 PSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAES 429 (562)
T ss_dssp SSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTT
T ss_pred cCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCccc
Confidence 455666666666666666666666666666666666666665 44555666666666666666666666654 555666
Q ss_pred CCEEEccCCCCCCcccc
Q 004979 216 ISEIQVDESWLTNAASR 232 (721)
Q Consensus 216 L~~l~l~~n~~~g~~p~ 232 (721)
|+.|+|++|.+++.+|.
T Consensus 430 L~~L~l~~n~l~~~~~~ 446 (562)
T 3a79_B 430 ILVLNLSSNMLTGSVFR 446 (562)
T ss_dssp CCEEECCSSCCCGGGGS
T ss_pred CCEEECCCCCCCcchhh
Confidence 66666666666665553
No 339
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.10 E-value=3.7e-11 Score=126.34 Aligned_cols=113 Identities=14% Similarity=0.047 Sum_probs=55.1
Q ss_pred cEEEEEeCCCCCCCcCc----hhhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccCccccc--CC--ccccCCC
Q 004979 119 KVVILNLRDLCLGGMLA----PELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGP--FP--SDFGNSF 190 (721)
Q Consensus 119 ~v~~l~L~~~~l~G~ip----~~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N~l~G~--iP--~~~~~~~ 190 (721)
.+..|+|++|.+++.++ ..+..+++|++|+|++|.+.+..|..++.+++|++|||++|++.|. +| ..++.++
T Consensus 118 ~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~ 197 (310)
T 4glp_A 118 ALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFP 197 (310)
T ss_dssp CCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSC
T ss_pred CCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCC
Confidence 34455555555555433 2234455555555555555555555555555555555555555442 22 1124455
Q ss_pred CCCEEECccCCCC--cCCChh-ccCCCCCCEEEccCCCCCCccc
Q 004979 191 SLTTLLLDNNQYL--GGISPE-LHVLKVISEIQVDESWLTNAAS 231 (721)
Q Consensus 191 ~L~~l~l~~N~~~--G~iP~~-~~~l~~L~~l~l~~n~~~g~~p 231 (721)
+|++|+|++|+++ +.++.. +..+++|++|+|++|.+++.+|
T Consensus 198 ~L~~L~Ls~N~l~~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p 241 (310)
T 4glp_A 198 AIQNLALRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLRATVN 241 (310)
T ss_dssp CCCSCBCCSSCCCCHHHHHHHHHHHTCCCSSEECTTSCCCCCCC
T ss_pred CCCEEECCCCCCCchHHHHHHHHhcCCCCCEEECCCCCCCccch
Confidence 5555555555553 111111 2444555555555555555444
No 340
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.10 E-value=1.7e-10 Score=125.32 Aligned_cols=111 Identities=16% Similarity=0.221 Sum_probs=91.5
Q ss_pred cEEEEEeCCCCCCCcCchh-hcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccCcccccCCccccCCCCCCEEEC
Q 004979 119 KVVILNLRDLCLGGMLAPE-LGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 197 (721)
Q Consensus 119 ~v~~l~L~~~~l~G~ip~~-l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N~l~G~iP~~~~~~~~L~~l~l 197 (721)
.+..++|+++.+.. +|+. +..+++|++|+|++|.+.+..|..++.+++|+.|+|++|.+++..|..++++++|++|+|
T Consensus 46 ~l~~l~l~~~~l~~-l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 124 (390)
T 3o6n_A 46 NQKIVTFKNSTMRK-LPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVL 124 (390)
T ss_dssp CCSEEEEESCEESE-ECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CceEEEecCCchhh-CChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEEC
Confidence 35677888877654 5544 688999999999999998877778899999999999999999877788889999999999
Q ss_pred ccCCCCcCCChh-ccCCCCCCEEEccCCCCCCccc
Q 004979 198 DNNQYLGGISPE-LHVLKVISEIQVDESWLTNAAS 231 (721)
Q Consensus 198 ~~N~~~G~iP~~-~~~l~~L~~l~l~~n~~~g~~p 231 (721)
++|.++ .+|+. +..+++|++|+|++|.+++..|
T Consensus 125 ~~n~l~-~l~~~~~~~l~~L~~L~L~~n~l~~~~~ 158 (390)
T 3o6n_A 125 ERNDLS-SLPRGIFHNTPKLTTLSMSNNNLERIED 158 (390)
T ss_dssp CSSCCC-CCCTTTTTTCTTCCEEECCSSCCCBCCT
T ss_pred CCCccC-cCCHHHhcCCCCCcEEECCCCccCccCh
Confidence 999988 56665 5789999999999999886544
No 341
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.09 E-value=2.1e-10 Score=131.95 Aligned_cols=116 Identities=19% Similarity=0.135 Sum_probs=103.1
Q ss_pred CcEEEEEeCCCCCCCcCchh-hcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccCccccc---CCccccCCCCCC
Q 004979 118 GKVVILNLRDLCLGGMLAPE-LGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGP---FPSDFGNSFSLT 193 (721)
Q Consensus 118 ~~v~~l~L~~~~l~G~ip~~-l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N~l~G~---iP~~~~~~~~L~ 193 (721)
..+..|+|++|.+.+.+++. +..+++|+.|+|++|.+.+..|..++.+++|+.|+|++|.+++. .+..+..+++|+
T Consensus 400 ~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~ 479 (606)
T 3t6q_A 400 PQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLE 479 (606)
T ss_dssp TTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCC
T ss_pred ccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCcc
Confidence 46789999999999887765 88999999999999999999999999999999999999999873 335688999999
Q ss_pred EEECccCCCCcCCChhccCCCCCCEEEccCCCCCCccccc
Q 004979 194 TLLLDNNQYLGGISPELHVLKVISEIQVDESWLTNAASRA 233 (721)
Q Consensus 194 ~l~l~~N~~~G~iP~~~~~l~~L~~l~l~~n~~~g~~p~~ 233 (721)
+|++++|++++.+|..+..+++|+.|+|++|.+++.+|..
T Consensus 480 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 519 (606)
T 3t6q_A 480 ILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEA 519 (606)
T ss_dssp EEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGG
T ss_pred EEECCCCccCccChhhhccccCCCEEECCCCccCcCChhH
Confidence 9999999999999999999999999999999999877754
No 342
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.08 E-value=3.1e-10 Score=125.41 Aligned_cols=123 Identities=19% Similarity=0.128 Sum_probs=107.4
Q ss_pred eeeEEeCC-----------CcEEEEEeCCCCCCCcCchhhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccCcc
Q 004979 110 WFGVECSD-----------GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNF 178 (721)
Q Consensus 110 w~gv~C~~-----------~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N~l 178 (721)
|..|.|.. ..++.|+|++|.+.+..+..+.++++|++|+|++|.+.+..|..+.++++|+.|+|++|++
T Consensus 45 ~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l 124 (440)
T 3zyj_A 45 FSKVICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRL 124 (440)
T ss_dssp SCEEECCSCCCSSCCSCCCTTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCC
T ss_pred CCEEEeCCCCcCcCCCCCCCCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcC
Confidence 67899963 2467899999999998888999999999999999999988888999999999999999999
Q ss_pred cccCCccccCCCCCCEEECccCCCCcCCChhccCCCCCCEEEccCCCCCCcccc
Q 004979 179 SGPFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLTNAASR 232 (721)
Q Consensus 179 ~G~iP~~~~~~~~L~~l~l~~N~~~G~iP~~~~~l~~L~~l~l~~n~~~g~~p~ 232 (721)
++-.+..+..+++|++|+|++|.+++-.+..+..+++|+.|+|++|+..+.++.
T Consensus 125 ~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~ 178 (440)
T 3zyj_A 125 TTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISE 178 (440)
T ss_dssp SSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECT
T ss_pred CeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCc
Confidence 965556799999999999999999876666788999999999998776666665
No 343
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.08 E-value=2.8e-10 Score=129.80 Aligned_cols=110 Identities=17% Similarity=0.070 Sum_probs=55.5
Q ss_pred cEEEEEeCCCCCCCcCchhhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccCcccccCCccccCCCCCCEEECc
Q 004979 119 KVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLD 198 (721)
Q Consensus 119 ~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N~l~G~iP~~~~~~~~L~~l~l~ 198 (721)
+++.|+|++|.+++..+..+.++++|++|+|++|.+++..|..++++++|++|+|++|++++..|..++++++|++|+++
T Consensus 29 ~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 108 (570)
T 2z63_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (570)
T ss_dssp SCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred cccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCcccccccccc
Confidence 34455555555555444445555555555555555554444445555555555555555554444445555555555555
Q ss_pred cCCCCcCCChhccCCCCCCEEEccCCCCCC
Q 004979 199 NNQYLGGISPELHVLKVISEIQVDESWLTN 228 (721)
Q Consensus 199 ~N~~~G~iP~~~~~l~~L~~l~l~~n~~~g 228 (721)
+|++++--+..++++++|++|+|++|.+++
T Consensus 109 ~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~ 138 (570)
T 2z63_A 109 ETNLASLENFPIGHLKTLKELNVAHNLIQS 138 (570)
T ss_dssp TSCCCCSTTCSCTTCTTCCEEECCSSCCCC
T ss_pred ccccccCCCccccccccccEEecCCCccce
Confidence 555444322234455555555555554443
No 344
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.07 E-value=2.3e-10 Score=133.71 Aligned_cols=115 Identities=17% Similarity=0.096 Sum_probs=88.7
Q ss_pred CcEEEEEeCCCCCCCcCchhhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccCcccccCCccccCCCCCCEEEC
Q 004979 118 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 197 (721)
Q Consensus 118 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N~l~G~iP~~~~~~~~L~~l~l 197 (721)
.+++.|+|++|.+.+..|..++++++|++|+|++|.+++-.+..++++++|++|+|++|++++..|..++++++|++|+|
T Consensus 49 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 128 (680)
T 1ziw_A 49 SQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDL 128 (680)
T ss_dssp TTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEEC
T ss_pred CcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEEC
Confidence 46778888888888877777888888888888888887533345788888888888888887666667788888888888
Q ss_pred ccCCCCcCCChhccCCCCCCEEEccCCCCCCcccc
Q 004979 198 DNNQYLGGISPELHVLKVISEIQVDESWLTNAASR 232 (721)
Q Consensus 198 ~~N~~~G~iP~~~~~l~~L~~l~l~~n~~~g~~p~ 232 (721)
++|.+++..|..++++++|++|+|++|.+++..+.
T Consensus 129 s~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 163 (680)
T 1ziw_A 129 SHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSE 163 (680)
T ss_dssp CSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHH
T ss_pred CCCcccccCchhhcccccCCEEEccCCcccccCHH
Confidence 88888887777777888888888888888765443
No 345
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.07 E-value=8.5e-11 Score=123.62 Aligned_cols=110 Identities=21% Similarity=0.193 Sum_probs=89.3
Q ss_pred cEEEEEeCCCCCCCcCchhh--cCCCCCCEEEccCCcccccCc----hhhcCCCCCCEeEcccCcccccCCccccCCCCC
Q 004979 119 KVVILNLRDLCLGGMLAPEL--GQLSELKSIILRNNSFFGTIP----KEIGELKELEILDLGFNNFSGPFPSDFGNSFSL 192 (721)
Q Consensus 119 ~v~~l~L~~~~l~G~ip~~l--~~l~~L~~L~L~~n~l~G~ip----~~l~~l~~L~~l~ls~N~l~G~iP~~~~~~~~L 192 (721)
++..|+|++|.+.|.+|..+ ..+++|++|+|++|.+++.+| ..+..+++|+.|+|++|++++..|..++++++|
T Consensus 92 ~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L 171 (310)
T 4glp_A 92 RLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPAL 171 (310)
T ss_dssp CCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTC
T ss_pred ceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCC
Confidence 47788888999888888887 888889999999999888666 344578889999999999988878888888899
Q ss_pred CEEECccCCCCcC--CChh--ccCCCCCCEEEccCCCCCC
Q 004979 193 TTLLLDNNQYLGG--ISPE--LHVLKVISEIQVDESWLTN 228 (721)
Q Consensus 193 ~~l~l~~N~~~G~--iP~~--~~~l~~L~~l~l~~n~~~g 228 (721)
++|+|++|++.|. ++.. ++.+++|++|+|++|.++.
T Consensus 172 ~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~ 211 (310)
T 4glp_A 172 TSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET 211 (310)
T ss_dssp CEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC
T ss_pred CEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc
Confidence 9999999988764 3322 3678888999999998873
No 346
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.07 E-value=3.6e-10 Score=122.70 Aligned_cols=111 Identities=23% Similarity=0.278 Sum_probs=101.0
Q ss_pred CcEEEEEeCCCCCCCcCchhhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccCcccccCCcc-ccCCCCCCEEE
Q 004979 118 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSD-FGNSFSLTTLL 196 (721)
Q Consensus 118 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N~l~G~iP~~-~~~~~~L~~l~ 196 (721)
.++..|+|++|.+.+..+..+..+++|++|+|++|.+.+..|..++++++|++|+|++|.++ .+|.. +.++++|++|+
T Consensus 69 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~l~~L~~L~ 147 (390)
T 3o6n_A 69 RQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTLS 147 (390)
T ss_dssp CCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEE
T ss_pred ccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccC-cCCHHHhcCCCCCcEEE
Confidence 36789999999998877778999999999999999999888888999999999999999999 56665 58999999999
Q ss_pred CccCCCCcCCChhccCCCCCCEEEccCCCCCCc
Q 004979 197 LDNNQYLGGISPELHVLKVISEIQVDESWLTNA 229 (721)
Q Consensus 197 l~~N~~~G~iP~~~~~l~~L~~l~l~~n~~~g~ 229 (721)
+++|.+++-.|..+..+++|+.|++++|.+++.
T Consensus 148 L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 180 (390)
T 3o6n_A 148 MSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV 180 (390)
T ss_dssp CCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC
T ss_pred CCCCccCccChhhccCCCCCCEEECCCCcCCcc
Confidence 999999988888899999999999999999863
No 347
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.06 E-value=2.5e-10 Score=127.50 Aligned_cols=112 Identities=17% Similarity=0.180 Sum_probs=88.8
Q ss_pred CcEEEEEeCCCCCCCcCchhhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccCcccccCCccccCCCCCCEEEC
Q 004979 118 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 197 (721)
Q Consensus 118 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N~l~G~iP~~~~~~~~L~~l~l 197 (721)
.++..|+|++|.+.+..|..+.++++|++|+|++|.+++..+..+.++++|+.|+|++|++++..|..+.++++|+.|+|
T Consensus 56 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l 135 (477)
T 2id5_A 56 PHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEV 135 (477)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEE
T ss_pred CCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEEC
Confidence 46778888888888877777888888888888888887544455678888888888888888877777888888888888
Q ss_pred ccCCCCcCCChhccCCCCCCEEEccCCCCCCc
Q 004979 198 DNNQYLGGISPELHVLKVISEIQVDESWLTNA 229 (721)
Q Consensus 198 ~~N~~~G~iP~~~~~l~~L~~l~l~~n~~~g~ 229 (721)
++|.+++-.|..+..+++|+.|+|++|.+++.
T Consensus 136 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 167 (477)
T 2id5_A 136 GDNDLVYISHRAFSGLNSLEQLTLEKCNLTSI 167 (477)
T ss_dssp CCTTCCEECTTSSTTCTTCCEEEEESCCCSSC
T ss_pred CCCccceeChhhccCCCCCCEEECCCCcCccc
Confidence 88888877777788888888888888887753
No 348
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.05 E-value=4.4e-10 Score=114.98 Aligned_cols=137 Identities=12% Similarity=0.136 Sum_probs=101.8
Q ss_pred hhhCcCCCCceeEEEEEEecCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCC-CCccceEeEEEecCCCceEEEE
Q 004979 430 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN-HKNFVNLIGYCEEDEPFTRMMV 508 (721)
Q Consensus 430 ~ii~~lg~G~~g~Vyk~~~~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~-H~nIv~l~g~~~~~~~~~~~lV 508 (721)
.+....+.|+.+.||+.... +..+++|......... ...+.+|+++++.+. |..+.++++++...+ ..++|
T Consensus 17 ~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~-----~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~--~~~lv 88 (263)
T 3tm0_A 17 RCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGT-----TYDVEREKDMMLWLEGKLPVPKVLHFERHDG--WSNLL 88 (263)
T ss_dssp EEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTS-----TTCHHHHHHHHHHHTTTSCCCCEEEEEEETT--EEEEE
T ss_pred eeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCC-----HHHHHHHHHHHHHHhcCCCCCeEEEEEecCC--ceEEE
Confidence 44455566777899999754 6788998875421111 135888999999884 677889999888765 67999
Q ss_pred EecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCC------------------------------------
Q 004979 509 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLT------------------------------------ 552 (721)
Q Consensus 509 ~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~------------------------------------ 552 (721)
|||++|.+|.+.+. +......++.+++.+|+.||+..
T Consensus 89 ~e~i~G~~l~~~~~-------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (263)
T 3tm0_A 89 MSEADGVLCSEEYE-------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEED 161 (263)
T ss_dssp EECCSSEEHHHHCC-------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTT
T ss_pred EEecCCeehhhccC-------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccccccc
Confidence 99999999877531 11123468889999999999711
Q ss_pred ---------------------CCeEeeCCCCCCeEeCCCCcEEEeccCCC
Q 004979 553 ---------------------PPIAHRNLQSSSIYLTEDYAAKISDFSFW 581 (721)
Q Consensus 553 ---------------------~~IvHrDLKp~NILl~~~~~~kL~DFGla 581 (721)
+.++|+|+++.|||++++..+.|+||+.+
T Consensus 162 ~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a 211 (263)
T 3tm0_A 162 TPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRS 211 (263)
T ss_dssp CSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTC
T ss_pred ccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhc
Confidence 34899999999999987666779999864
No 349
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.05 E-value=2.2e-10 Score=130.47 Aligned_cols=101 Identities=22% Similarity=0.180 Sum_probs=91.9
Q ss_pred CcEEEEEeCCCCCCCcCchhhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccCcccccC-CccccCCCCCCEEE
Q 004979 118 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPF-PSDFGNSFSLTTLL 196 (721)
Q Consensus 118 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N~l~G~i-P~~~~~~~~L~~l~ 196 (721)
..++.|+|++|.|+ .+|..++.|++|+.|+|++|.|++ || .++.+++|+.|+|++|+|++.+ |..++.+++|+.|+
T Consensus 463 ~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~ 539 (567)
T 1dce_A 463 LLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLN 539 (567)
T ss_dssp TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEE
T ss_pred ccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEE
Confidence 57899999999999 899999999999999999999998 88 8999999999999999999987 99999999999999
Q ss_pred CccCCCCcCCChh---ccCCCCCCEEEc
Q 004979 197 LDNNQYLGGISPE---LHVLKVISEIQV 221 (721)
Q Consensus 197 l~~N~~~G~iP~~---~~~l~~L~~l~l 221 (721)
|++|.++|..|.. +..+++|+.|+|
T Consensus 540 L~~N~l~~~~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 540 LQGNSLCQEEGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp CTTSGGGGSSSCTTHHHHHCTTCSEEEC
T ss_pred ecCCcCCCCccHHHHHHHHCcccCccCC
Confidence 9999999876632 334889998865
No 350
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.04 E-value=1.3e-09 Score=120.53 Aligned_cols=114 Identities=19% Similarity=0.110 Sum_probs=99.2
Q ss_pred CcEEEEEeCCCCCCCcCchhhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccCcccccCCccccCCCCCCEEEC
Q 004979 118 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 197 (721)
Q Consensus 118 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N~l~G~iP~~~~~~~~L~~l~l 197 (721)
.++..|+|++|.+.+..+..+.++++|++|+|++|.+++..+..+..+++|+.|+|++|.+++-.+..+.++++|+.|+|
T Consensus 88 ~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l 167 (440)
T 3zyj_A 88 RHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDL 167 (440)
T ss_dssp SSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCC
Confidence 47889999999999887888999999999999999999666667999999999999999999766668889999999999
Q ss_pred ccCCCCcCCCh-hccCCCCCCEEEccCCCCCCcccc
Q 004979 198 DNNQYLGGISP-ELHVLKVISEIQVDESWLTNAASR 232 (721)
Q Consensus 198 ~~N~~~G~iP~-~~~~l~~L~~l~l~~n~~~g~~p~ 232 (721)
++|+..+.+|. .+..+++|++|+|++|.++ .+|.
T Consensus 168 ~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~~ 202 (440)
T 3zyj_A 168 GELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIPN 202 (440)
T ss_dssp CCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCCC
T ss_pred CCCCCcceeCcchhhcccccCeecCCCCcCc-cccc
Confidence 99777777776 5788999999999999988 3553
No 351
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.04 E-value=1.2e-10 Score=111.60 Aligned_cols=105 Identities=16% Similarity=0.120 Sum_probs=92.8
Q ss_pred cEEEEEeCCCCCCCcCchhhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccCcccccCCc--cccCCCCCCEEE
Q 004979 119 KVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPS--DFGNSFSLTTLL 196 (721)
Q Consensus 119 ~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N~l~G~iP~--~~~~~~~L~~l~ 196 (721)
.+..|+|++|.+++- +.+..+++|++|+|++|.+++..|..++.+++|++|+|++|+++ .+|. .+..+++|+.|+
T Consensus 43 ~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~ 119 (176)
T 1a9n_A 43 QFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLV-ELGDLDPLASLKSLTYLC 119 (176)
T ss_dssp CCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECCSCCCC-CGGGGGGGGGCTTCCEEE
T ss_pred CCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEECCCCcCC-cchhhHhhhcCCCCCEEE
Confidence 788999999999985 67999999999999999999654444589999999999999995 6786 889999999999
Q ss_pred CccCCCCcCCChh----ccCCCCCCEEEccCCCCC
Q 004979 197 LDNNQYLGGISPE----LHVLKVISEIQVDESWLT 227 (721)
Q Consensus 197 l~~N~~~G~iP~~----~~~l~~L~~l~l~~n~~~ 227 (721)
+++|.++ .+|.. +..+++|+.|+++.|...
T Consensus 120 l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 120 ILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred ecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 9999997 67775 899999999999998765
No 352
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.03 E-value=5.8e-10 Score=118.16 Aligned_cols=111 Identities=16% Similarity=0.172 Sum_probs=92.9
Q ss_pred CcEEEEEeCCCCCC--CcCchhhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccCcccccCCccccCCCCCCEE
Q 004979 118 GKVVILNLRDLCLG--GMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTL 195 (721)
Q Consensus 118 ~~v~~l~L~~~~l~--G~ip~~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N~l~G~iP~~~~~~~~L~~l 195 (721)
..+..|+|++|.+. |..+..+..+++|++|+|++|.++. +|..+. ++|+.|+|++|.+++..|..+..+++|+.|
T Consensus 145 ~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 221 (330)
T 1xku_A 145 NQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT-IPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKL 221 (330)
T ss_dssp TTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS-CCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEE
T ss_pred ccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcccc-CCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEE
Confidence 46788999999886 4667778889999999999998874 676554 789999999999988888888889999999
Q ss_pred ECccCCCCcCCChhccCCCCCCEEEccCCCCCCcccc
Q 004979 196 LLDNNQYLGGISPELHVLKVISEIQVDESWLTNAASR 232 (721)
Q Consensus 196 ~l~~N~~~G~iP~~~~~l~~L~~l~l~~n~~~g~~p~ 232 (721)
+|++|.+++..|..+..+++|+.|+|++|.++ .+|.
T Consensus 222 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~ 257 (330)
T 1xku_A 222 GLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPG 257 (330)
T ss_dssp ECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCT
T ss_pred ECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCCh
Confidence 99999988877778888899999999999888 5665
No 353
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.02 E-value=2.3e-12 Score=126.40 Aligned_cols=105 Identities=25% Similarity=0.316 Sum_probs=68.1
Q ss_pred cEEEEEeCCCCCCCcCch------hhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccCcccccCCccccCCCCC
Q 004979 119 KVVILNLRDLCLGGMLAP------ELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSL 192 (721)
Q Consensus 119 ~v~~l~L~~~~l~G~ip~------~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N~l~G~iP~~~~~~~~L 192 (721)
+|+.++|+.+.|+|.+|+ .+..+++|++|+|++|.+++ +| .+.++++|+.|+|++|.++ .+|..+..+++|
T Consensus 19 ~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L 95 (198)
T 1ds9_A 19 SVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTL 95 (198)
T ss_dssp CCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHC
T ss_pred cccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcC
Confidence 344555555566666554 66667777777777777665 56 6666677777777777766 566666566667
Q ss_pred CEEECccCCCCcCCChhccCCCCCCEEEccCCCCCC
Q 004979 193 TTLLLDNNQYLGGISPELHVLKVISEIQVDESWLTN 228 (721)
Q Consensus 193 ~~l~l~~N~~~G~iP~~~~~l~~L~~l~l~~n~~~g 228 (721)
++|+|++|++++ +| .+..+++|++|+|++|.+++
T Consensus 96 ~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~ 129 (198)
T 1ds9_A 96 EELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITN 129 (198)
T ss_dssp SEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCC
T ss_pred CEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCc
Confidence 777777776665 44 46666667777777666664
No 354
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.01 E-value=6.2e-10 Score=117.39 Aligned_cols=106 Identities=19% Similarity=0.101 Sum_probs=68.9
Q ss_pred cEEEEEeCCCCCCCcCchhhcCCCCCCEEEccCCcccccCchhhc-CCCCCCEeEcccCcccccCCccccCCCCCCEEEC
Q 004979 119 KVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIG-ELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 197 (721)
Q Consensus 119 ~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~l~G~ip~~l~-~l~~L~~l~ls~N~l~G~iP~~~~~~~~L~~l~l 197 (721)
.+..|+|++|.+++..+..++.+++|++|+|++|.+.+..|..+. .+++|+.|+|++|.+++. | ....+++|++|+|
T Consensus 121 ~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~-~~~~l~~L~~L~L 198 (317)
T 3o53_A 121 GKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-K-GQVVFAKLKTLDL 198 (317)
T ss_dssp SCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-E-CCCCCTTCCEEEC
T ss_pred CCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-c-cccccccCCEEEC
Confidence 456666666666665555666667777777777777766555553 566777777777776644 2 2334667777777
Q ss_pred ccCCCCcCCChhccCCCCCCEEEccCCCCC
Q 004979 198 DNNQYLGGISPELHVLKVISEIQVDESWLT 227 (721)
Q Consensus 198 ~~N~~~G~iP~~~~~l~~L~~l~l~~n~~~ 227 (721)
++|.+++ +|+.+..+++|+.|+|++|.++
T Consensus 199 s~N~l~~-l~~~~~~l~~L~~L~L~~N~l~ 227 (317)
T 3o53_A 199 SSNKLAF-MGPEFQSAAGVTWISLRNNKLV 227 (317)
T ss_dssp CSSCCCE-ECGGGGGGTTCSEEECTTSCCC
T ss_pred CCCcCCc-chhhhcccCcccEEECcCCccc
Confidence 7777664 4455666777777777777766
No 355
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.00 E-value=6.9e-10 Score=123.06 Aligned_cols=112 Identities=21% Similarity=0.203 Sum_probs=98.4
Q ss_pred CcEEEEEeCCCCCCCcCch-hhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccCcccccCCccccCCCCCCEEE
Q 004979 118 GKVVILNLRDLCLGGMLAP-ELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLL 196 (721)
Q Consensus 118 ~~v~~l~L~~~~l~G~ip~-~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N~l~G~iP~~~~~~~~L~~l~ 196 (721)
..+..|+|++++.-+.+++ .+..+++|++|+|++|.+++ +| .+..+++|+.|+|++|++++..|..+.++++|+.|+
T Consensus 171 ~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 248 (452)
T 3zyi_A 171 PSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD-MP-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLW 248 (452)
T ss_dssp TTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS-CC-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEE
T ss_pred CcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccc-cc-cccccccccEEECcCCcCcccCcccccCccCCCEEE
Confidence 3678899999777777776 48899999999999999985 45 588999999999999999998899999999999999
Q ss_pred CccCCCCcCCChhccCCCCCCEEEccCCCCCCccc
Q 004979 197 LDNNQYLGGISPELHVLKVISEIQVDESWLTNAAS 231 (721)
Q Consensus 197 l~~N~~~G~iP~~~~~l~~L~~l~l~~n~~~g~~p 231 (721)
|++|++++..|..+..+++|+.|+|++|.+++-.+
T Consensus 249 L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 283 (452)
T 3zyi_A 249 VMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPH 283 (452)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred eCCCcCceECHHHhcCCCCCCEEECCCCcCCccCh
Confidence 99999999889899999999999999999986433
No 356
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.00 E-value=3.7e-10 Score=120.93 Aligned_cols=114 Identities=18% Similarity=0.170 Sum_probs=99.8
Q ss_pred CcEEEEEeCCCCCCCcCchhhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccCcccccCCc--cccCCCCCCEE
Q 004979 118 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPS--DFGNSFSLTTL 195 (721)
Q Consensus 118 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N~l~G~iP~--~~~~~~~L~~l 195 (721)
.++..|+|++|.+.+..|..+.++++|++|+|++|.+++..+..++++++|++|+|++|+++ .+|. .+.++++|++|
T Consensus 76 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~~l~~L~~L 154 (353)
T 2z80_A 76 VNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQIL 154 (353)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCS-SSCSSCSCTTCTTCCEE
T ss_pred CCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCc-ccCchhhhccCCCCcEE
Confidence 47899999999999888888999999999999999999654555899999999999999999 5665 78899999999
Q ss_pred ECccCC-CCcCCChhccCCCCCCEEEccCCCCCCcccc
Q 004979 196 LLDNNQ-YLGGISPELHVLKVISEIQVDESWLTNAASR 232 (721)
Q Consensus 196 ~l~~N~-~~G~iP~~~~~l~~L~~l~l~~n~~~g~~p~ 232 (721)
++++|+ +.+-.|..+..+++|+.|++++|.+++..|.
T Consensus 155 ~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 192 (353)
T 2z80_A 155 RVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPK 192 (353)
T ss_dssp EEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTT
T ss_pred ECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHH
Confidence 999995 5555567889999999999999999987665
No 357
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.00 E-value=5.4e-10 Score=128.56 Aligned_cols=111 Identities=22% Similarity=0.221 Sum_probs=101.9
Q ss_pred cEEEEEeCCCCCCCcCchhhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccCcccccCCccccCCCCCCEEECc
Q 004979 119 KVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLD 198 (721)
Q Consensus 119 ~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N~l~G~iP~~~~~~~~L~~l~l~ 198 (721)
.+..|+|++|.+.+..|..++.+++|++|+|++|.+++..|..++++++|++|+|++|.+++-.|..++++++|++|+|+
T Consensus 76 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls 155 (597)
T 3oja_B 76 QVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMS 155 (597)
T ss_dssp CCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEee
Confidence 57899999999999888899999999999999999999888889999999999999999995444446899999999999
Q ss_pred cCCCCcCCChhccCCCCCCEEEccCCCCCCc
Q 004979 199 NNQYLGGISPELHVLKVISEIQVDESWLTNA 229 (721)
Q Consensus 199 ~N~~~G~iP~~~~~l~~L~~l~l~~n~~~g~ 229 (721)
+|.+++..|..++.+++|+.|+|++|.+++.
T Consensus 156 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 186 (597)
T 3oja_B 156 NNNLERIEDDTFQATTSLQNLQLSSNRLTHV 186 (597)
T ss_dssp SSCCCBCCTTTTTTCTTCCEEECTTSCCSBC
T ss_pred CCcCCCCChhhhhcCCcCcEEECcCCCCCCc
Confidence 9999998888999999999999999999974
No 358
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.00 E-value=4.9e-10 Score=118.16 Aligned_cols=111 Identities=18% Similarity=0.213 Sum_probs=97.8
Q ss_pred CcEEEEEeCCCCCCCcCchhhc-CCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccCcccccCCccccCCCCCCEEE
Q 004979 118 GKVVILNLRDLCLGGMLAPELG-QLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLL 196 (721)
Q Consensus 118 ~~v~~l~L~~~~l~G~ip~~l~-~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N~l~G~iP~~~~~~~~L~~l~ 196 (721)
..+..|+|++|.+.+..+..+. .+++|++|+|++|.+++. | ....+++|+.|+|++|++++ +|+.+..+++|+.|+
T Consensus 144 ~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~ 220 (317)
T 3o53_A 144 SRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-K-GQVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWIS 220 (317)
T ss_dssp SSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-E-CCCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEE
T ss_pred CCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-c-cccccccCCEEECCCCcCCc-chhhhcccCcccEEE
Confidence 4799999999999998887774 799999999999999865 4 34569999999999999995 666799999999999
Q ss_pred CccCCCCcCCChhccCCCCCCEEEccCCCCC-Ccccc
Q 004979 197 LDNNQYLGGISPELHVLKVISEIQVDESWLT-NAASR 232 (721)
Q Consensus 197 l~~N~~~G~iP~~~~~l~~L~~l~l~~n~~~-g~~p~ 232 (721)
|++|.++ .||..+..+++|+.|+|++|.++ +.+|.
T Consensus 221 L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~ 256 (317)
T 3o53_A 221 LRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRD 256 (317)
T ss_dssp CTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHH
T ss_pred CcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHH
Confidence 9999999 58999999999999999999998 54443
No 359
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.00 E-value=4.2e-10 Score=113.45 Aligned_cols=113 Identities=16% Similarity=0.145 Sum_probs=98.8
Q ss_pred CcEEEEEeCCCC-CCCcCchhhcCCCCCCEEEccC-CcccccCchhhcCCCCCCEeEcccCcccccCCccccCCCCCC--
Q 004979 118 GKVVILNLRDLC-LGGMLAPELGQLSELKSIILRN-NSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLT-- 193 (721)
Q Consensus 118 ~~v~~l~L~~~~-l~G~ip~~l~~l~~L~~L~L~~-n~l~G~ip~~l~~l~~L~~l~ls~N~l~G~iP~~~~~~~~L~-- 193 (721)
.++..|+|++|. +++-.+..+..+++|++|+|++ |.+++..|..+..+++|+.|+|++|.+++ +|. +..+++|+
T Consensus 55 ~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L 132 (239)
T 2xwt_C 55 PNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIF 132 (239)
T ss_dssp TTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSE
T ss_pred CCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-cccccccccc
Confidence 478999999997 7655555789999999999999 99997667788999999999999999997 887 88889998
Q ss_pred -EEECccC-CCCcCCChhccCCCCCC-EEEccCCCCCCccccc
Q 004979 194 -TLLLDNN-QYLGGISPELHVLKVIS-EIQVDESWLTNAASRA 233 (721)
Q Consensus 194 -~l~l~~N-~~~G~iP~~~~~l~~L~-~l~l~~n~~~g~~p~~ 233 (721)
+|++++| ++++-.+..+..+++|+ .|++++|.++ .+|..
T Consensus 133 ~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~ 174 (239)
T 2xwt_C 133 FILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGY 174 (239)
T ss_dssp EEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTT
T ss_pred cEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHh
Confidence 9999999 88766556689999999 9999999998 67753
No 360
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=98.99 E-value=3.1e-10 Score=120.39 Aligned_cols=110 Identities=21% Similarity=0.234 Sum_probs=80.5
Q ss_pred CcEEEEEeCCCCCC--CcCchhhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccCcccccCCccccCCCCCCEE
Q 004979 118 GKVVILNLRDLCLG--GMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTL 195 (721)
Q Consensus 118 ~~v~~l~L~~~~l~--G~ip~~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N~l~G~iP~~~~~~~~L~~l 195 (721)
..+..|+|++|.+. |..+..+..+ +|++|++++|.+++ +|..+. ++|+.|+|++|.+++..|..+..+++|+.|
T Consensus 147 ~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L 222 (332)
T 2ft3_A 147 RNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG-IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRL 222 (332)
T ss_dssp SSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCC
T ss_pred ccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc-cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEE
Confidence 46888999999885 4566667766 77788888777775 665544 677777777777777666777777777777
Q ss_pred ECccCCCCcCCChhccCCCCCCEEEccCCCCCCcccc
Q 004979 196 LLDNNQYLGGISPELHVLKVISEIQVDESWLTNAASR 232 (721)
Q Consensus 196 ~l~~N~~~G~iP~~~~~l~~L~~l~l~~n~~~g~~p~ 232 (721)
+|++|.+++..|..+..+++|+.|+|++|.++ .+|.
T Consensus 223 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~ 258 (332)
T 2ft3_A 223 GLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPA 258 (332)
T ss_dssp BCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCT
T ss_pred ECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecCh
Confidence 77777777766667777777777777777777 5554
No 361
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=98.99 E-value=9.4e-10 Score=105.37 Aligned_cols=98 Identities=22% Similarity=0.245 Sum_probs=83.6
Q ss_pred CceeeEEeCC-----------CcEEEEEeCCCCCCCcCchhhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccC
Q 004979 108 CSWFGVECSD-----------GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFN 176 (721)
Q Consensus 108 C~w~gv~C~~-----------~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N 176 (721)
|...-+.|.+ ..+..|+|++|.+.+..|..+..+++|++|+|++|.|++-.+..+.++++|+.|+|++|
T Consensus 12 C~~~~l~~~~n~l~~iP~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 12 CDQTLVNCQNIRLASVPAGIPTDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp ECSSEEECCSSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred ECCcEEEeCCCCCCccCCCcCCCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 4455667752 25789999999999988989999999999999999999755555789999999999999
Q ss_pred cccccCCccccCCCCCCEEECccCCCCcC
Q 004979 177 NFSGPFPSDFGNSFSLTTLLLDNNQYLGG 205 (721)
Q Consensus 177 ~l~G~iP~~~~~~~~L~~l~l~~N~~~G~ 205 (721)
+|++-.|..+..+++|++|+|++|.+...
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c~ 120 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDCE 120 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCTT
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcccc
Confidence 99965555599999999999999999864
No 362
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=98.97 E-value=5.6e-10 Score=126.79 Aligned_cols=98 Identities=20% Similarity=0.178 Sum_probs=80.2
Q ss_pred cEEEEEeCCCCCCCcCchhhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccCcccccCCccccCCCCCCEEECc
Q 004979 119 KVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLD 198 (721)
Q Consensus 119 ~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N~l~G~iP~~~~~~~~L~~l~l~ 198 (721)
.+..|+|++|.|++ ||. .+++|+.|+|++|.|++ ||. .+++|+.|+|++|+|++ ||. +. ++|++|+|+
T Consensus 121 ~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls 188 (571)
T 3cvr_A 121 SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVS 188 (571)
T ss_dssp TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECC
T ss_pred CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECc
Confidence 67778888888877 666 67889999999999987 776 67899999999999998 888 65 899999999
Q ss_pred cCCCCcCCChhccCCCCC-------CEEEccCCCCCCccccc
Q 004979 199 NNQYLGGISPELHVLKVI-------SEIQVDESWLTNAASRA 233 (721)
Q Consensus 199 ~N~~~G~iP~~~~~l~~L-------~~l~l~~n~~~g~~p~~ 233 (721)
+|+++ .||. +.. +| +.|+|++|.++ .+|..
T Consensus 189 ~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~ 225 (571)
T 3cvr_A 189 TNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRIT-HIPEN 225 (571)
T ss_dssp SSCCS-SCCC-CC----------CCEEEECCSSCCC-CCCGG
T ss_pred CCCCC-chhh-HHH--hhhcccccceEEecCCCcce-ecCHH
Confidence 99998 7887 654 77 99999999998 47764
No 363
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=98.97 E-value=1.7e-09 Score=112.64 Aligned_cols=106 Identities=22% Similarity=0.285 Sum_probs=81.8
Q ss_pred CcEEEEEeCCCCCCCcCchhhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccCcccccCCccccCCCCCCEEEC
Q 004979 118 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 197 (721)
Q Consensus 118 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N~l~G~iP~~~~~~~~L~~l~l 197 (721)
.++..|+|++|.+.+..+ +..+++|++|+|++|.+++ +| .++.+++|+.|+|++|++++ + +.+..+++|+.|++
T Consensus 68 ~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~n~i~~-~-~~l~~l~~L~~L~l 141 (291)
T 1h6t_A 68 PNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYL 141 (291)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCCC-C-GGGGGCTTCCEEEC
T ss_pred CCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEECCCCcCCC-C-hhhcCCCCCCEEEc
Confidence 467788888888877443 7888888888888888876 33 47888888888888888876 3 45778888888888
Q ss_pred ccCCCCcCCChhccCCCCCCEEEccCCCCCCccc
Q 004979 198 DNNQYLGGISPELHVLKVISEIQVDESWLTNAAS 231 (721)
Q Consensus 198 ~~N~~~G~iP~~~~~l~~L~~l~l~~n~~~g~~p 231 (721)
++|++++- +.+..+++|+.|+|++|.+++..|
T Consensus 142 ~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~ 173 (291)
T 1h6t_A 142 GNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP 173 (291)
T ss_dssp CSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG
T ss_pred cCCcCCcc--hhhccCCCCCEEEccCCccccchh
Confidence 88888764 567888888888888888876544
No 364
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=98.97 E-value=1.6e-10 Score=128.28 Aligned_cols=49 Identities=12% Similarity=-0.018 Sum_probs=22.6
Q ss_pred CcEEEEEeCCCCCCCcCchhhcCCCCCCEEEccCCcccccCchhhcCCCC
Q 004979 118 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKE 167 (721)
Q Consensus 118 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~ 167 (721)
.++..++|++|.+ |.||+++++|++|++|+|++|.+.|.+|..++++.+
T Consensus 11 ~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~ 59 (454)
T 1jl5_A 11 TFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQRE 59 (454)
T ss_dssp ------------------------CCHHHHHHHHHHHHHTSCTTSCCCHH
T ss_pred ccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchh
Confidence 4688899999999 899999999999999999999999999988877654
No 365
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=98.97 E-value=1.4e-09 Score=120.78 Aligned_cols=100 Identities=16% Similarity=0.228 Sum_probs=70.0
Q ss_pred CcEEEEEeCCCCCCCcCchhhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccCcccccCCccccCCCCCCEEEC
Q 004979 118 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 197 (721)
Q Consensus 118 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N~l~G~iP~~~~~~~~L~~l~l 197 (721)
.+++.|+|+++.+.|. | .++.+++|++|+|++|.+++ +| ++.+++|++|+|++|++++ +| ++++++|++|++
T Consensus 42 ~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~-~~--~~~l~~L~~L~Ls~N~l~~-~~--~~~l~~L~~L~L 113 (457)
T 3bz5_A 42 ATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITT-LD--LSQNTNLTYLACDSNKLTN-LD--VTPLTKLTYLNC 113 (457)
T ss_dssp TTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSC-CC--CTTCTTCCEEEC
T ss_pred CCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCe-Ec--cccCCCCCEEECcCCCCce-ee--cCCCCcCCEEEC
Confidence 3566777777777763 3 57777777777777777776 33 6777777777777777776 33 667777777777
Q ss_pred ccCCCCcCCChhccCCCCCCEEEccCCCCCC
Q 004979 198 DNNQYLGGISPELHVLKVISEIQVDESWLTN 228 (721)
Q Consensus 198 ~~N~~~G~iP~~~~~l~~L~~l~l~~n~~~g 228 (721)
++|++++ +| ++.+++|++|++++|.+++
T Consensus 114 ~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~ 141 (457)
T 3bz5_A 114 DTNKLTK-LD--VSQNPLLTYLNCARNTLTE 141 (457)
T ss_dssp CSSCCSC-CC--CTTCTTCCEEECTTSCCSC
T ss_pred CCCcCCe-ec--CCCCCcCCEEECCCCccce
Confidence 7777776 44 6677777777777777776
No 366
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=98.95 E-value=2.2e-09 Score=109.96 Aligned_cols=102 Identities=18% Similarity=0.158 Sum_probs=59.1
Q ss_pred cEEEEEeCCCCCCCcCchhhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccCcccccCCccccCCCCCCEEECc
Q 004979 119 KVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLD 198 (721)
Q Consensus 119 ~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N~l~G~iP~~~~~~~~L~~l~l~ 198 (721)
++..|+|++|.+++..+ +..+++|+.|+|++|.+++ +|.. .. ++|+.|+|++|++++ +| .+..+++|+.|+|+
T Consensus 64 ~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N~l~~-l~~~-~~-~~L~~L~L~~N~l~~-~~-~l~~l~~L~~L~Ls 136 (263)
T 1xeu_A 64 NLKELHLSHNQISDLSP--LKDLTKLEELSVNRNRLKN-LNGI-PS-ACLSRLFLDNNELRD-TD-SLIHLKNLEILSIR 136 (263)
T ss_dssp TCCEEECCSSCCCCCGG--GTTCSSCCEEECCSSCCSC-CTTC-CC-SSCCEEECCSSCCSB-SG-GGTTCTTCCEEECT
T ss_pred CCCEEECCCCccCCChh--hccCCCCCEEECCCCccCC-cCcc-cc-CcccEEEccCCccCC-Ch-hhcCcccccEEECC
Confidence 45566666666655332 6666666666666666654 3332 22 566666666666664 22 45666666666666
Q ss_pred cCCCCcCCChhccCCCCCCEEEccCCCCCCc
Q 004979 199 NNQYLGGISPELHVLKVISEIQVDESWLTNA 229 (721)
Q Consensus 199 ~N~~~G~iP~~~~~l~~L~~l~l~~n~~~g~ 229 (721)
+|++++- | .+..+++|+.|+|++|.+++.
T Consensus 137 ~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~~ 165 (263)
T 1xeu_A 137 NNKLKSI-V-MLGFLSKLEVLDLHGNEITNT 165 (263)
T ss_dssp TSCCCBC-G-GGGGCTTCCEEECTTSCCCBC
T ss_pred CCcCCCC-h-HHccCCCCCEEECCCCcCcch
Confidence 6666552 3 456666666666666666543
No 367
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=98.94 E-value=2.1e-09 Score=111.97 Aligned_cols=103 Identities=25% Similarity=0.304 Sum_probs=92.6
Q ss_pred CcEEEEEeCCCCCCCcCchhhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccCcccccCCccccCCCCCCEEEC
Q 004979 118 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 197 (721)
Q Consensus 118 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N~l~G~iP~~~~~~~~L~~l~l 197 (721)
.++..|+|++|.+.+ + +.+..+++|++|+|++|.+++ + +.+..+++|+.|+|++|++++. +.+..+++|+.|+|
T Consensus 90 ~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~n~i~~-~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L 163 (291)
T 1h6t_A 90 KNLGWLFLDENKVKD-L-SSLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSL 163 (291)
T ss_dssp TTCCEEECCSSCCCC-G-GGGTTCTTCCEEECTTSCCCC-C-GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEEC
T ss_pred CCCCEEECCCCcCCC-C-hhhccCCCCCEEECCCCcCCC-C-hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEc
Confidence 578999999999987 3 459999999999999999987 3 4789999999999999999975 67899999999999
Q ss_pred ccCCCCcCCChhccCCCCCCEEEccCCCCCC
Q 004979 198 DNNQYLGGISPELHVLKVISEIQVDESWLTN 228 (721)
Q Consensus 198 ~~N~~~G~iP~~~~~l~~L~~l~l~~n~~~g 228 (721)
++|.+++..| +..+++|+.|+|++|.+++
T Consensus 164 ~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~ 192 (291)
T 1h6t_A 164 EDNQISDIVP--LAGLTKLQNLYLSKNHISD 192 (291)
T ss_dssp CSSCCCCCGG--GTTCTTCCEEECCSSCCCB
T ss_pred cCCccccchh--hcCCCccCEEECCCCcCCC
Confidence 9999987554 9999999999999999986
No 368
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=98.94 E-value=2.3e-09 Score=109.86 Aligned_cols=103 Identities=23% Similarity=0.279 Sum_probs=89.7
Q ss_pred CcEEEEEeCCCCCCCcCchhhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccCcccccCCccccCCCCCCEEEC
Q 004979 118 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 197 (721)
Q Consensus 118 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N~l~G~iP~~~~~~~~L~~l~l 197 (721)
.++..|+|++|.+.. ++ .+..+++|++|+|++|.+++..| +.++++|+.|+|++|++++ +|... . ++|+.|+|
T Consensus 41 ~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N~l~~-l~~~~-~-~~L~~L~L 113 (263)
T 1xeu_A 41 SGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVNRNRLKN-LNGIP-S-ACLSRLFL 113 (263)
T ss_dssp TTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCSSCCSC-CTTCC-C-SSCCEEEC
T ss_pred CcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECCCCccCC-cCccc-c-CcccEEEc
Confidence 468899999999874 55 78999999999999999997544 9999999999999999997 66433 3 89999999
Q ss_pred ccCCCCcCCChhccCCCCCCEEEccCCCCCCc
Q 004979 198 DNNQYLGGISPELHVLKVISEIQVDESWLTNA 229 (721)
Q Consensus 198 ~~N~~~G~iP~~~~~l~~L~~l~l~~n~~~g~ 229 (721)
++|++++ + +.+..+++|+.|+|++|.+++-
T Consensus 114 ~~N~l~~-~-~~l~~l~~L~~L~Ls~N~i~~~ 143 (263)
T 1xeu_A 114 DNNELRD-T-DSLIHLKNLEILSIRNNKLKSI 143 (263)
T ss_dssp CSSCCSB-S-GGGTTCTTCCEEECTTSCCCBC
T ss_pred cCCccCC-C-hhhcCcccccEEECCCCcCCCC
Confidence 9999987 4 4699999999999999999874
No 369
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=98.93 E-value=1.7e-09 Score=110.06 Aligned_cols=126 Identities=12% Similarity=0.123 Sum_probs=92.5
Q ss_pred CCceeEEEEEEecCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCc--cceEeEEEecCCCceEEEEEecCCC
Q 004979 437 DGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKN--FVNLIGYCEEDEPFTRMMVFEYSPN 514 (721)
Q Consensus 437 ~G~~g~Vyk~~~~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~n--Iv~l~g~~~~~~~~~~~lV~Ey~~~ 514 (721)
.|..+.||+....+|..+++|...... ...+.+|+++++.+++.+ +.+++++....+ ..++||||++|
T Consensus 30 gg~~~~v~~~~~~~g~~~vlK~~~~~~--------~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~--~~~~v~e~i~G 99 (264)
T 1nd4_A 30 GCSDAAVFRLSAQGRPVLFVKTDLSGA--------LNELQDEAARLSWLATTGVPCAAVLDVVTEAG--RDWLLLGEVPG 99 (264)
T ss_dssp TTSSCEEEEEECTTSCCEEEEEECSCT--------TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSS--CEEEEEECCSS
T ss_pred CCCCceEEEEecCCCCeEEEEeCCccc--------chhhhHHHHHHHHHHhCCCCCCeEEEeccCCC--CCEEEEEecCC
Confidence 455689999987777789998764321 134778899998886545 456888877655 56999999999
Q ss_pred CChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCC------------------------------------------
Q 004979 515 GSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLT------------------------------------------ 552 (721)
Q Consensus 515 GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~------------------------------------------ 552 (721)
.+|. ... .+ ...++.+++..|+.||+..
T Consensus 100 ~~l~--~~~-----~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (264)
T 1nd4_A 100 QDLL--SSH-----LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAE 169 (264)
T ss_dssp EETT--TSC-----CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHH
T ss_pred cccC--cCc-----CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHH
Confidence 8884 211 11 2356777888888888643
Q ss_pred --------------CCeEeeCCCCCCeEeCCCCcEEEeccCCCC
Q 004979 553 --------------PPIAHRNLQSSSIYLTEDYAAKISDFSFWN 582 (721)
Q Consensus 553 --------------~~IvHrDLKp~NILl~~~~~~kL~DFGla~ 582 (721)
+.++|+|++|.|||++++..++|.||+.+.
T Consensus 170 ~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 170 LFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp HHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred HHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 129999999999999887667899999753
No 370
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=98.92 E-value=2.9e-10 Score=123.38 Aligned_cols=111 Identities=14% Similarity=0.123 Sum_probs=71.0
Q ss_pred CcEEEEEeCCCCCC-CcCc---hhhcCCCCCCEEEccCCccc--c---cCchhhcCCCCCCEeEcccCccc----ccCCc
Q 004979 118 GKVVILNLRDLCLG-GMLA---PELGQLSELKSIILRNNSFF--G---TIPKEIGELKELEILDLGFNNFS----GPFPS 184 (721)
Q Consensus 118 ~~v~~l~L~~~~l~-G~ip---~~l~~l~~L~~L~L~~n~l~--G---~ip~~l~~l~~L~~l~ls~N~l~----G~iP~ 184 (721)
.++..|+|++|.++ +.++ ..+..+++|+.|+|++|.++ | .+|..+..+++|+.|+|++|.++ +.+|.
T Consensus 159 ~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~ 238 (386)
T 2ca6_A 159 PPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAI 238 (386)
T ss_dssp CCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHH
T ss_pred CCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHH
Confidence 35666777777766 4444 35556667777777777666 3 23446666677777777777765 56666
Q ss_pred cccCCCCCCEEECccCCCCcC----CChhc--cCCCCCCEEEccCCCCCC
Q 004979 185 DFGNSFSLTTLLLDNNQYLGG----ISPEL--HVLKVISEIQVDESWLTN 228 (721)
Q Consensus 185 ~~~~~~~L~~l~l~~N~~~G~----iP~~~--~~l~~L~~l~l~~n~~~g 228 (721)
.+..+++|++|+|++|.+++. +|..+ +++++|+.|+|++|.+++
T Consensus 239 ~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~ 288 (386)
T 2ca6_A 239 ALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIEL 288 (386)
T ss_dssp HGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBH
T ss_pred HHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCH
Confidence 666666777777777776654 45555 336667777777777666
No 371
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=98.92 E-value=4e-10 Score=119.53 Aligned_cols=111 Identities=14% Similarity=0.110 Sum_probs=91.3
Q ss_pred CcEEEEEeCCCCCCCcCchhhcCCCCCCEEEccCCccccc-CchhhcCCCCCCEeEcccCcccccCCccccCCCCCCEEE
Q 004979 118 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGT-IPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLL 196 (721)
Q Consensus 118 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~l~G~-ip~~l~~l~~L~~l~ls~N~l~G~iP~~~~~~~~L~~l~ 196 (721)
.++..++|++|.+.+.++. +..+++|++|+|++|.+++. +|..+..+++|+.|+|++|.+++.+|..++.+++|++|+
T Consensus 70 ~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~ 148 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLN 148 (336)
T ss_dssp TTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEE
T ss_pred ccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEE
Confidence 4577888888888776654 66788888999998888876 888888888899999998888888888888888899999
Q ss_pred CccC-CCCc-CCChhccCCCCCCEEEccCC-CCCCc
Q 004979 197 LDNN-QYLG-GISPELHVLKVISEIQVDES-WLTNA 229 (721)
Q Consensus 197 l~~N-~~~G-~iP~~~~~l~~L~~l~l~~n-~~~g~ 229 (721)
|++| .+++ .+|..+..+++|++|+|++| .+++.
T Consensus 149 L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~ 184 (336)
T 2ast_B 149 LSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEK 184 (336)
T ss_dssp CTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHH
T ss_pred CCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChH
Confidence 9888 6776 37777888888888988888 88764
No 372
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=98.92 E-value=3e-09 Score=111.68 Aligned_cols=106 Identities=20% Similarity=0.345 Sum_probs=89.3
Q ss_pred CcEEEEEeCCCCCCCcCchhhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccCcccccCCccccCCCCCCEEEC
Q 004979 118 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 197 (721)
Q Consensus 118 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N~l~G~iP~~~~~~~~L~~l~l 197 (721)
.++..|+|++|.+.+ + +.+..+++|++|+|++|.+++ +|. +..+++|+.|+|++|.+++..+ +..+++|++|+|
T Consensus 85 ~~L~~L~L~~n~l~~-~-~~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l 158 (308)
T 1h6u_A 85 TKITELELSGNPLKN-V-SAIAGLQSIKTLDLTSTQITD-VTP-LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSI 158 (308)
T ss_dssp CSCCEEECCSCCCSC-C-GGGTTCTTCCEEECTTSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEEC
T ss_pred CCCCEEEccCCcCCC-c-hhhcCCCCCCEEECCCCCCCC-chh-hcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEc
Confidence 478899999999887 3 468899999999999999987 453 8899999999999999986543 888999999999
Q ss_pred ccCCCCcCCChhccCCCCCCEEEccCCCCCCccc
Q 004979 198 DNNQYLGGISPELHVLKVISEIQVDESWLTNAAS 231 (721)
Q Consensus 198 ~~N~~~G~iP~~~~~l~~L~~l~l~~n~~~g~~p 231 (721)
++|.+++ +|+ +..+++|+.|+|++|.+++..+
T Consensus 159 ~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~ 190 (308)
T 1h6u_A 159 GNAQVSD-LTP-LANLSKLTTLKADDNKISDISP 190 (308)
T ss_dssp CSSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG
T ss_pred cCCcCCC-Chh-hcCCCCCCEEECCCCccCcChh
Confidence 9999886 444 8889999999999999987543
No 373
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=98.91 E-value=8.6e-12 Score=122.22 Aligned_cols=110 Identities=17% Similarity=0.176 Sum_probs=98.0
Q ss_pred CcEEEEEeCCCCCCCcCchhhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccCcccccCCccccCCCCCCEEEC
Q 004979 118 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 197 (721)
Q Consensus 118 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N~l~G~iP~~~~~~~~L~~l~l 197 (721)
..+..|+|++|.+.+ +| .+..+++|++|+|++|.++ .+|..+..+++|+.|+|++|++++ +| .+..+++|++|+|
T Consensus 48 ~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l 122 (198)
T 1ds9_A 48 KACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNLRVLYM 122 (198)
T ss_dssp TTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEE
T ss_pred CCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCCCEEEC
Confidence 578899999999988 77 8999999999999999998 789888889999999999999997 66 6889999999999
Q ss_pred ccCCCCcCC-ChhccCCCCCCEEEccCCCCCCcccc
Q 004979 198 DNNQYLGGI-SPELHVLKVISEIQVDESWLTNAASR 232 (721)
Q Consensus 198 ~~N~~~G~i-P~~~~~l~~L~~l~l~~n~~~g~~p~ 232 (721)
++|++++-- ...+..+++|++|++++|.+++.+|.
T Consensus 123 ~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~ 158 (198)
T 1ds9_A 123 SNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKE 158 (198)
T ss_dssp SEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHT
T ss_pred CCCcCCchhHHHHHhcCCCCCEEEecCCcccccccc
Confidence 999998622 24789999999999999999887664
No 374
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=98.91 E-value=3.8e-09 Score=110.93 Aligned_cols=104 Identities=22% Similarity=0.350 Sum_probs=84.4
Q ss_pred CcEEEEEeCCCCCCCcCchhhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccCcccccCCccccCCCCCCEEEC
Q 004979 118 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 197 (721)
Q Consensus 118 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N~l~G~iP~~~~~~~~L~~l~l 197 (721)
.++..|+|++|.+.+.. + +..+++|++|+|++|.+.+ +| .+..+++|+.|+|++|++++ +|+ +..+++|++|++
T Consensus 63 ~~L~~L~L~~n~i~~~~-~-~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l 136 (308)
T 1h6u_A 63 NNLIGLELKDNQITDLA-P-LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLDLTSTQITD-VTP-LAGLSNLQVLYL 136 (308)
T ss_dssp TTCCEEECCSSCCCCCG-G-GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEECTTSCCCC-CGG-GTTCTTCCEEEC
T ss_pred CCCCEEEccCCcCCCCh-h-HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEEECCCCCCCC-chh-hcCCCCCCEEEC
Confidence 46888899888887643 3 8888999999999998876 34 68888999999999999886 443 888889999999
Q ss_pred ccCCCCcCCChhccCCCCCCEEEccCCCCCCc
Q 004979 198 DNNQYLGGISPELHVLKVISEIQVDESWLTNA 229 (721)
Q Consensus 198 ~~N~~~G~iP~~~~~l~~L~~l~l~~n~~~g~ 229 (721)
++|.+++- |+ +..+++|+.|+|++|.+++.
T Consensus 137 ~~n~l~~~-~~-l~~l~~L~~L~l~~n~l~~~ 166 (308)
T 1h6u_A 137 DLNQITNI-SP-LAGLTNLQYLSIGNAQVSDL 166 (308)
T ss_dssp CSSCCCCC-GG-GGGCTTCCEEECCSSCCCCC
T ss_pred CCCccCcC-cc-ccCCCCccEEEccCCcCCCC
Confidence 99988764 33 88888999999999988863
No 375
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=98.91 E-value=2.8e-09 Score=122.18 Aligned_cols=106 Identities=22% Similarity=0.282 Sum_probs=85.3
Q ss_pred CcEEEEEeCCCCCCCcCchhhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccCcccccCCccccCCCCCCEEEC
Q 004979 118 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 197 (721)
Q Consensus 118 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N~l~G~iP~~~~~~~~L~~l~l 197 (721)
.++..|+|++|.|.+..| +..|++|+.|+|++|.|.+ +| .+..|++|+.|+|++|++++ + +.+..+++|+.|+|
T Consensus 65 ~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~L 138 (605)
T 1m9s_A 65 PNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYL 138 (605)
T ss_dssp TTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEEC
T ss_pred CCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEEC
Confidence 467888888888887544 8888888888888888876 33 68888888888888888886 3 45788888888888
Q ss_pred ccCCCCcCCChhccCCCCCCEEEccCCCCCCccc
Q 004979 198 DNNQYLGGISPELHVLKVISEIQVDESWLTNAAS 231 (721)
Q Consensus 198 ~~N~~~G~iP~~~~~l~~L~~l~l~~n~~~g~~p 231 (721)
++|.+++- +.+..+++|+.|+|++|.+++..|
T Consensus 139 s~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~ 170 (605)
T 1m9s_A 139 GNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP 170 (605)
T ss_dssp CSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG
T ss_pred CCCccCCc--hhhcccCCCCEEECcCCcCCCchh
Confidence 88888874 568888888888888888887665
No 376
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=98.91 E-value=1.4e-10 Score=123.00 Aligned_cols=119 Identities=11% Similarity=0.082 Sum_probs=106.1
Q ss_pred CCceeeEEeCCCcEEEEEeCCCCCCCcCchhhcCC--CCCCEEEccCCcccccCchhhcCCCCCCEeEcccCccccc-CC
Q 004979 107 PCSWFGVECSDGKVVILNLRDLCLGGMLAPELGQL--SELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGP-FP 183 (721)
Q Consensus 107 ~C~w~gv~C~~~~v~~l~L~~~~l~G~ip~~l~~l--~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N~l~G~-iP 183 (721)
|.+|.++.|+...+..++|+++.+. +..+..+ +.++.|++++|.+.+.+|. +.++++|+.|+|++|.+++. +|
T Consensus 36 c~~W~~~~~~~~~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~ 111 (336)
T 2ast_B 36 CKRWYRLASDESLWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLH 111 (336)
T ss_dssp CHHHHHHHTCSTTSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHH
T ss_pred HHHHHHHhcCchhheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHH
Confidence 4469998887666889999999887 5566777 8999999999999988775 67899999999999999987 99
Q ss_pred ccccCCCCCCEEECccCCCCcCCChhccCCCCCCEEEccCC-CCCCc
Q 004979 184 SDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDES-WLTNA 229 (721)
Q Consensus 184 ~~~~~~~~L~~l~l~~N~~~G~iP~~~~~l~~L~~l~l~~n-~~~g~ 229 (721)
..+..+++|++|+|++|.+++.+|..++.+++|++|+|++| .+++.
T Consensus 112 ~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~ 158 (336)
T 2ast_B 112 GILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEF 158 (336)
T ss_dssp HHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHH
T ss_pred HHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHH
Confidence 89999999999999999999999999999999999999999 78863
No 377
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=98.90 E-value=2.8e-09 Score=122.16 Aligned_cols=105 Identities=25% Similarity=0.285 Sum_probs=92.5
Q ss_pred CCcEEEEEeCCCCCCCcCchhhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccCcccccCCccccCCCCCCEEE
Q 004979 117 DGKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLL 196 (721)
Q Consensus 117 ~~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N~l~G~iP~~~~~~~~L~~l~ 196 (721)
..++..|+|++|.|.+ + +.+..|++|+.|+|++|.+.+ + +.+..|++|+.|+|++|.+++. +.+..+++|+.|+
T Consensus 86 l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~ 159 (605)
T 1m9s_A 86 LKNLGWLFLDENKIKD-L-SSLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLS 159 (605)
T ss_dssp CTTCCEEECCSSCCCC-C-TTSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEE
T ss_pred CCCCCEEECcCCCCCC-C-hhhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEE
Confidence 3578899999999987 3 478999999999999999987 4 4689999999999999999975 6788999999999
Q ss_pred CccCCCCcCCChhccCCCCCCEEEccCCCCCCc
Q 004979 197 LDNNQYLGGISPELHVLKVISEIQVDESWLTNA 229 (721)
Q Consensus 197 l~~N~~~G~iP~~~~~l~~L~~l~l~~n~~~g~ 229 (721)
|++|.+++..| +..+++|+.|+|++|.+++.
T Consensus 160 Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l 190 (605)
T 1m9s_A 160 LEDNQISDIVP--LAGLTKLQNLYLSKNHISDL 190 (605)
T ss_dssp CCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC
T ss_pred CcCCcCCCchh--hccCCCCCEEECcCCCCCCC
Confidence 99999998766 89999999999999999873
No 378
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.87 E-value=5.2e-09 Score=112.27 Aligned_cols=142 Identities=11% Similarity=0.209 Sum_probs=102.6
Q ss_pred hCcCCCCceeEEEEEEecCCcEEEEEEee--eccccchhhHHHHHHHHHHHHHhcCC--CCccceEeEEEecCCC-ceEE
Q 004979 432 IGSFSDGTVGTVYKGTLSSGVEIAVTSTS--VKSRADWSKNLESQFRKKIDTLSKVN--HKNFVNLIGYCEEDEP-FTRM 506 (721)
Q Consensus 432 i~~lg~G~~g~Vyk~~~~~~~~vavk~~~--~~~~~~~~~~~~~~f~~Ei~~l~~l~--H~nIv~l~g~~~~~~~-~~~~ 506 (721)
+..++.|.++.||+....+ ..+++|+.. .... ......+.+|+++++.++ +..+.++++++.+.+. ...+
T Consensus 43 ~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~----~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~ 117 (359)
T 3dxp_A 43 VEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKL----LPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAF 117 (359)
T ss_dssp EEECCC-CCSCEEEEECSS-CEEEEECCCC--------------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCE
T ss_pred EEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCC----CCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeE
Confidence 3567789999999998764 567777654 2111 011246788999999886 4567889998876531 1358
Q ss_pred EEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcC-----------------------------------
Q 004979 507 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQL----------------------------------- 551 (721)
Q Consensus 507 lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~----------------------------------- 551 (721)
+||||++|..+.+.. ...++...+..++.++++.|+.||..
T Consensus 118 ~vme~v~G~~l~~~~----~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (359)
T 3dxp_A 118 YIMEFVSGRVLWDQS----LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETES 193 (359)
T ss_dssp EEEECCCCBCCCCTT----CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSC
T ss_pred EEEEecCCeecCCCc----cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcC
Confidence 999999998875421 23477888889999999999999963
Q ss_pred ---------------------CCCeEeeCCCCCCeEeCCCCc--EEEeccCCCC
Q 004979 552 ---------------------TPPIAHRNLQSSSIYLTEDYA--AKISDFSFWN 582 (721)
Q Consensus 552 ---------------------~~~IvHrDLKp~NILl~~~~~--~kL~DFGla~ 582 (721)
.+.++|+|+++.|||+++++. +.|.||+.+.
T Consensus 194 ~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~ 247 (359)
T 3dxp_A 194 IPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELST 247 (359)
T ss_dssp CHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCE
T ss_pred ChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccc
Confidence 145999999999999997753 6899999764
No 379
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=98.85 E-value=3.1e-09 Score=113.17 Aligned_cols=109 Identities=21% Similarity=0.286 Sum_probs=97.7
Q ss_pred CcEEEEEeCCCCCCCcCchhhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccCcccccCCccccCCCCCCEEEC
Q 004979 118 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 197 (721)
Q Consensus 118 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N~l~G~iP~~~~~~~~L~~l~l 197 (721)
.++..|+|++|.+.+..+ +..+++|++|+|++|.+++ + +.+..+++|+.|++++|++++. +.+..+++|+.|++
T Consensus 221 ~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L 294 (347)
T 4fmz_A 221 TRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISD-I-NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFL 294 (347)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEEC
T ss_pred CcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCC-C-hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEEC
Confidence 478899999999987544 8999999999999999987 3 4689999999999999999974 45889999999999
Q ss_pred ccCCCCcCCChhccCCCCCCEEEccCCCCCCcccc
Q 004979 198 DNNQYLGGISPELHVLKVISEIQVDESWLTNAASR 232 (721)
Q Consensus 198 ~~N~~~G~iP~~~~~l~~L~~l~l~~n~~~g~~p~ 232 (721)
++|.+++..|..++.+++|+.|+|++|.+++..|.
T Consensus 295 ~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~ 329 (347)
T 4fmz_A 295 NNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRPL 329 (347)
T ss_dssp CSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGGG
T ss_pred cCCcCCCcChhHhhccccCCEEEccCCccccccCh
Confidence 99999999999999999999999999999987663
No 380
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=98.85 E-value=5.3e-09 Score=111.37 Aligned_cols=107 Identities=18% Similarity=0.240 Sum_probs=94.1
Q ss_pred CcEEEEEeCCCCCCCcCchhhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccCcccccCCccccCCCCCCEEEC
Q 004979 118 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 197 (721)
Q Consensus 118 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N~l~G~iP~~~~~~~~L~~l~l 197 (721)
..+..+++++|.+.+..+ +..+++|+.|+|++|.+++..+ +..+++|+.|+|++|.+++ + +.+..+++|++|++
T Consensus 199 ~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~l 272 (347)
T 4fmz_A 199 TSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISD-I-NAVKDLTKLKMLNV 272 (347)
T ss_dssp TTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCCEEEC
T ss_pred CccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCC-C-hhHhcCCCcCEEEc
Confidence 468899999999987655 8899999999999999986544 8999999999999999987 3 46889999999999
Q ss_pred ccCCCCcCCChhccCCCCCCEEEccCCCCCCcccc
Q 004979 198 DNNQYLGGISPELHVLKVISEIQVDESWLTNAASR 232 (721)
Q Consensus 198 ~~N~~~G~iP~~~~~l~~L~~l~l~~n~~~g~~p~ 232 (721)
++|.+++- +.+..+++|+.|++++|.+++..|.
T Consensus 273 ~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~ 305 (347)
T 4fmz_A 273 GSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDME 305 (347)
T ss_dssp CSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHH
T ss_pred cCCccCCC--hhhcCCCCCCEEECcCCcCCCcChh
Confidence 99999874 4689999999999999999987665
No 381
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=98.85 E-value=5.8e-09 Score=116.07 Aligned_cols=104 Identities=20% Similarity=0.223 Sum_probs=85.2
Q ss_pred CcEEEEEeCCCCCCCcCchhhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccCcccccCCccccCCCCCCEEEC
Q 004979 118 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 197 (721)
Q Consensus 118 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N~l~G~iP~~~~~~~~L~~l~l 197 (721)
.++..|+|++|.+.+..+ +..+++|+.|+|++|.+++..| +..+++|+.|+|++|++++..| ++.+++|+.|+|
T Consensus 243 ~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L 316 (466)
T 1o6v_A 243 TNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTL 316 (466)
T ss_dssp TTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEEC
T ss_pred CCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEEC
Confidence 467888999998887654 7888899999999998887544 7888889999999998887544 778888899999
Q ss_pred ccCCCCcCCChhccCCCCCCEEEccCCCCCCc
Q 004979 198 DNNQYLGGISPELHVLKVISEIQVDESWLTNA 229 (721)
Q Consensus 198 ~~N~~~G~iP~~~~~l~~L~~l~l~~n~~~g~ 229 (721)
++|++++..| +..+++|+.|++++|.+++.
T Consensus 317 ~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~ 346 (466)
T 1o6v_A 317 YFNNISDISP--VSSLTKLQRLFFYNNKVSDV 346 (466)
T ss_dssp CSSCCSCCGG--GGGCTTCCEEECCSSCCCCC
T ss_pred cCCcCCCchh--hccCccCCEeECCCCccCCc
Confidence 8888887665 77888888888888888874
No 382
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=98.84 E-value=2.3e-09 Score=118.89 Aligned_cols=103 Identities=21% Similarity=0.285 Sum_probs=73.5
Q ss_pred CcEEEEEeCCCCCCCcCchhhcCCCCCCEEEccCCcccc--cCchhhc-------------CC-CCCCEeEcccCccccc
Q 004979 118 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFG--TIPKEIG-------------EL-KELEILDLGFNNFSGP 181 (721)
Q Consensus 118 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~l~G--~ip~~l~-------------~l-~~L~~l~ls~N~l~G~ 181 (721)
..+..|+|++|.+.+ +|.. +++|+.|+|++|.++| .+|+.+. .+ ++|+.|+|++|++++
T Consensus 257 ~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~l~~~~~~L~~L~l~~N~l~~i~~~~~~L~~L~Ls~N~l~~- 331 (454)
T 1jl5_A 257 PSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSGLSELPPNLYYLNASSNEIRSLCDLPPSLEELNVSNNKLIE- 331 (454)
T ss_dssp TTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSEESCCCTTCCEEECCSSCCSEECCCCTTCCEEECCSSCCSC-
T ss_pred cccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCcccCcCCcCCEEECcCCcCCcccCCcCcCCEEECCCCcccc-
Confidence 356677777777766 4432 3566666666666666 4443332 22 578888888888886
Q ss_pred CCccccCCCCCCEEECccCCCCcCCChhccCCCCCCEEEccCCCCCC--cccc
Q 004979 182 FPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLTN--AASR 232 (721)
Q Consensus 182 iP~~~~~~~~L~~l~l~~N~~~G~iP~~~~~l~~L~~l~l~~n~~~g--~~p~ 232 (721)
+|.. +++|++|++++|+++ .||. .+++|+.|+|++|.++| .+|.
T Consensus 332 lp~~---~~~L~~L~L~~N~l~-~lp~---~l~~L~~L~L~~N~l~~l~~ip~ 377 (454)
T 1jl5_A 332 LPAL---PPRLERLIASFNHLA-EVPE---LPQNLKQLHVEYNPLREFPDIPE 377 (454)
T ss_dssp CCCC---CTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCSSCCCCCT
T ss_pred cccc---CCcCCEEECCCCccc-cccc---hhhhccEEECCCCCCCcCCCChH
Confidence 7764 578899999999888 5877 47889999999999998 6665
No 383
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=98.82 E-value=5.7e-09 Score=119.91 Aligned_cols=58 Identities=17% Similarity=0.184 Sum_probs=31.3
Q ss_pred CCCCEeEcccCcccccCCccccCCCCCCEEECccCCCCcCCChhccCCCCCCEEEccCCCCCCcccc
Q 004979 166 KELEILDLGFNNFSGPFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLTNAASR 232 (721)
Q Consensus 166 ~~L~~l~ls~N~l~G~iP~~~~~~~~L~~l~l~~N~~~G~iP~~~~~l~~L~~l~l~~n~~~g~~p~ 232 (721)
++|+.|+|++|++++ +| ..+++|+.|+|++|+++ .||. .+++|+.|+|++|.++ .+|.
T Consensus 221 ~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~ 278 (622)
T 3g06_A 221 SGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPE 278 (622)
T ss_dssp TTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCG
T ss_pred CCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCH
Confidence 455556666665554 44 33455555666655555 3544 4455555666666555 4443
No 384
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=98.82 E-value=9.5e-09 Score=114.04 Aligned_cols=99 Identities=17% Similarity=0.183 Sum_probs=55.7
Q ss_pred cEEEEEeCCCCCCCcCchhhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccCcccccCCccccCCCCCCEEECc
Q 004979 119 KVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLD 198 (721)
Q Consensus 119 ~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N~l~G~iP~~~~~~~~L~~l~l~ 198 (721)
++..|+|++|.+++ ++ ++.+++|++|+|++|.+.|.+ .++.+++|+.|+|++|++++ +| ++.+++|+.|+++
T Consensus 128 ~L~~L~l~~N~l~~-l~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~ 199 (457)
T 3bz5_A 128 LLTYLNCARNTLTE-ID--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCD 199 (457)
T ss_dssp TCCEEECTTSCCSC-CC--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCC-CC--CTTCTTCCEEECC
T ss_pred cCCEEECCCCccce-ec--cccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCccce-ec--cccCCCCCEEECc
Confidence 56666677666666 32 555666666666666555555 25555666666666666555 44 4555555555555
Q ss_pred cCCCCcCCChhccCCCCCCEEEccCCCCCC
Q 004979 199 NNQYLGGISPELHVLKVISEIQVDESWLTN 228 (721)
Q Consensus 199 ~N~~~G~iP~~~~~l~~L~~l~l~~n~~~g 228 (721)
+|++++- .++.+++|+.|+|++|.+++
T Consensus 200 ~N~l~~~---~l~~l~~L~~L~Ls~N~l~~ 226 (457)
T 3bz5_A 200 TNNITKL---DLNQNIQLTFLDCSSNKLTE 226 (457)
T ss_dssp SSCCSCC---CCTTCTTCSEEECCSSCCSC
T ss_pred CCcCCee---ccccCCCCCEEECcCCcccc
Confidence 5555542 24555555555555555554
No 385
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=98.81 E-value=1.1e-09 Score=118.81 Aligned_cols=113 Identities=21% Similarity=0.296 Sum_probs=98.7
Q ss_pred CCcEEEEEeCCCCCCC----cCchhhcCC---------CCCCEEEccCCccc-ccCc---hhhcCCCCCCEeEcccCccc
Q 004979 117 DGKVVILNLRDLCLGG----MLAPELGQL---------SELKSIILRNNSFF-GTIP---KEIGELKELEILDLGFNNFS 179 (721)
Q Consensus 117 ~~~v~~l~L~~~~l~G----~ip~~l~~l---------~~L~~L~L~~n~l~-G~ip---~~l~~l~~L~~l~ls~N~l~ 179 (721)
..++..|+|++|.+++ .++..+..+ ++|++|+|++|.++ +.+| ..+..+++|+.|+|++|+++
T Consensus 121 ~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~ 200 (386)
T 2ca6_A 121 HTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIR 200 (386)
T ss_dssp CTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCC
T ss_pred CCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCC
Confidence 3578999999999974 356667777 89999999999998 6677 57788999999999999998
Q ss_pred --c---cCCccccCCCCCCEEECccCCCC----cCCChhccCCCCCCEEEccCCCCCCc
Q 004979 180 --G---PFPSDFGNSFSLTTLLLDNNQYL----GGISPELHVLKVISEIQVDESWLTNA 229 (721)
Q Consensus 180 --G---~iP~~~~~~~~L~~l~l~~N~~~----G~iP~~~~~l~~L~~l~l~~n~~~g~ 229 (721)
| .+|..+..+++|++|+|++|.++ +.+|..+..+++|+.|+|++|.+++.
T Consensus 201 ~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~ 259 (386)
T 2ca6_A 201 PEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSAR 259 (386)
T ss_dssp HHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHH
T ss_pred HhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchh
Confidence 4 45558899999999999999997 78999999999999999999999876
No 386
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=98.80 E-value=5.4e-09 Score=116.32 Aligned_cols=107 Identities=25% Similarity=0.294 Sum_probs=95.8
Q ss_pred CcEEEEEeCCCCCCCcCchhhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccCcccccCCccccCCCCCCEEEC
Q 004979 118 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 197 (721)
Q Consensus 118 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N~l~G~iP~~~~~~~~L~~l~l 197 (721)
..+..|+|++|.+.+..+ +..+++|+.|+|++|.+.+..| ++.+++|+.|+|++|++++..| +..+++|+.|++
T Consensus 265 ~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l 338 (466)
T 1o6v_A 265 TKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFF 338 (466)
T ss_dssp TTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEEC
T ss_pred CCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeEC
Confidence 468899999999988544 8899999999999999998554 8899999999999999998776 789999999999
Q ss_pred ccCCCCcCCChhccCCCCCCEEEccCCCCCCcccc
Q 004979 198 DNNQYLGGISPELHVLKVISEIQVDESWLTNAASR 232 (721)
Q Consensus 198 ~~N~~~G~iP~~~~~l~~L~~l~l~~n~~~g~~p~ 232 (721)
++|.+++. +.+..+++|+.|++++|.+++.+|.
T Consensus 339 ~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~~ 371 (466)
T 1o6v_A 339 YNNKVSDV--SSLANLTNINWLSAGHNQISDLTPL 371 (466)
T ss_dssp CSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGGG
T ss_pred CCCccCCc--hhhccCCCCCEEeCCCCccCccchh
Confidence 99999985 5799999999999999999998874
No 387
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=98.79 E-value=8.7e-09 Score=109.85 Aligned_cols=83 Identities=10% Similarity=0.030 Sum_probs=76.6
Q ss_pred CEEEccCC-cccccCchhhcCCCCCCEeEccc-CcccccCCccccCCCCCCEEECccCCCCcCCChhccCCCCCCEEEcc
Q 004979 145 KSIILRNN-SFFGTIPKEIGELKELEILDLGF-NNFSGPFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVD 222 (721)
Q Consensus 145 ~~L~L~~n-~l~G~ip~~l~~l~~L~~l~ls~-N~l~G~iP~~~~~~~~L~~l~l~~N~~~G~iP~~~~~l~~L~~l~l~ 222 (721)
..++++++ .|++ ||. ++.+++|+.|+|++ |+|++..|..|+++++|+.|+|++|+|+|-.|..+.++++|+.|+|+
T Consensus 11 ~~v~~~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 35789998 8885 999 99999999999996 99998888899999999999999999999999899999999999999
Q ss_pred CCCCCCc
Q 004979 223 ESWLTNA 229 (721)
Q Consensus 223 ~n~~~g~ 229 (721)
+|.|++-
T Consensus 89 ~N~l~~~ 95 (347)
T 2ifg_A 89 FNALESL 95 (347)
T ss_dssp SSCCSCC
T ss_pred CCcccee
Confidence 9999964
No 388
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=98.75 E-value=3.2e-08 Score=105.78 Aligned_cols=115 Identities=17% Similarity=0.136 Sum_probs=68.0
Q ss_pred CceeeEEeCCC-----------cEEEEEeCCCCCCCcCch-hhcCCCCCCEEEccCCcccccCchh-hcCCCCCCE-eEc
Q 004979 108 CSWFGVECSDG-----------KVVILNLRDLCLGGMLAP-ELGQLSELKSIILRNNSFFGTIPKE-IGELKELEI-LDL 173 (721)
Q Consensus 108 C~w~gv~C~~~-----------~v~~l~L~~~~l~G~ip~-~l~~l~~L~~L~L~~n~l~G~ip~~-l~~l~~L~~-l~l 173 (721)
|.|..|.|+.. .++.|+|++|.++. ||+ .+.+|++|++|+|++|.+.+.||.. +.++++|.. +++
T Consensus 9 C~~~~v~C~~~~Lt~iP~~l~~~l~~L~Ls~N~i~~-i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~ 87 (350)
T 4ay9_X 9 CSNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLRV-IQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIE 87 (350)
T ss_dssp EETTEEEEESTTCCSCCTTCCTTCSEEEEESCCCSE-ECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEE
T ss_pred eeCCEEEecCCCCCccCcCcCCCCCEEEccCCcCCC-cCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcc
Confidence 78889999632 35566666666653 443 3566666666666666666666543 455555543 445
Q ss_pred ccCcccccCCccccCCCCCCEEECccCCCCcCCChhccCCCCCCEEEccC
Q 004979 174 GFNNFSGPFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDE 223 (721)
Q Consensus 174 s~N~l~G~iP~~~~~~~~L~~l~l~~N~~~G~iP~~~~~l~~L~~l~l~~ 223 (721)
+.|++++-.|..+.++++|++|++++|++++..+..+....++..|++.+
T Consensus 88 ~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~ 137 (350)
T 4ay9_X 88 KANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQD 137 (350)
T ss_dssp EETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEES
T ss_pred cCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhcc
Confidence 55666655555566666666666666666554444444444555555544
No 389
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.75 E-value=5.1e-10 Score=114.19 Aligned_cols=124 Identities=20% Similarity=0.131 Sum_probs=88.0
Q ss_pred CCceeeEEeCCC--cEEEEEeCC---CCCCCcCchh------------------------hcCCCCCCE--EEccCC---
Q 004979 107 PCSWFGVECSDG--KVVILNLRD---LCLGGMLAPE------------------------LGQLSELKS--IILRNN--- 152 (721)
Q Consensus 107 ~C~w~gv~C~~~--~v~~l~L~~---~~l~G~ip~~------------------------l~~l~~L~~--L~L~~n--- 152 (721)
.|+|.|+.|+.+ +|+.+...+ ..+.|.+.++ +...+.|.. ++++.|
T Consensus 77 l~~~~g~i~~~~~~ki~~~v~~~~~~~~~~~~l~~~~~~~Lk~~l~~ryn~~~~~LdLs~l~~dp~L~~~~l~l~~N~~~ 156 (267)
T 3rw6_A 77 LKAVNYKILDRENRRISIIINSSAPPHTILNELKPEQVEQLKLIMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNRRS 156 (267)
T ss_dssp HHHTTSSCBCTTSCBCCCEEEECCCCHHHHTSCCHHHHHHHHHHHHHTEETTTTEEECTTGGGCHHHHHTTCCCCTTSHH
T ss_pred HHhcCcEEECCCCCEEEEEEecCCCcccccccCCHHHHHHHHHHHHhccchhccccCHHHcCCCcchhhcCccccCCHHH
Confidence 488999999743 676665554 3344555431 111222332 455666
Q ss_pred cccccCchhhcCCCCCCEeEcccCcccc--cCCccccCCCCCCEEECccCCCCcCCChhccCCC--CCCEEEccCCCCCC
Q 004979 153 SFFGTIPKEIGELKELEILDLGFNNFSG--PFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLK--VISEIQVDESWLTN 228 (721)
Q Consensus 153 ~l~G~ip~~l~~l~~L~~l~ls~N~l~G--~iP~~~~~~~~L~~l~l~~N~~~G~iP~~~~~l~--~L~~l~l~~n~~~g 228 (721)
.+.+.++-.-.++++|+.|+||+|+|++ .+|..+..+++|+.|+|++|++++- .++..+. +|+.|+|++|.+++
T Consensus 157 ~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~ 234 (267)
T 3rw6_A 157 CMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCD 234 (267)
T ss_dssp HHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGG
T ss_pred HHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCcc
Confidence 3333333333578999999999999999 7888888999999999999999875 4455555 99999999999998
Q ss_pred cccc
Q 004979 229 AASR 232 (721)
Q Consensus 229 ~~p~ 232 (721)
.+|.
T Consensus 235 ~~~~ 238 (267)
T 3rw6_A 235 TFRD 238 (267)
T ss_dssp GCSS
T ss_pred ccCc
Confidence 7763
No 390
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=98.75 E-value=3.3e-09 Score=114.03 Aligned_cols=104 Identities=14% Similarity=0.044 Sum_probs=45.8
Q ss_pred EeCCCCCCCcCchhhcCCCCCCEEEccCCcccccCc----hhhcCCC-CCCEeEcccCcccccCCccccCC-----CCCC
Q 004979 124 NLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIP----KEIGELK-ELEILDLGFNNFSGPFPSDFGNS-----FSLT 193 (721)
Q Consensus 124 ~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~l~G~ip----~~l~~l~-~L~~l~ls~N~l~G~iP~~~~~~-----~~L~ 193 (721)
+|+.++++|.+|..+...++|++|+|++|.+++.-+ ..+..++ +|+.|+|++|.+++..+..+..+ ++|+
T Consensus 4 ~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~ 83 (362)
T 3goz_A 4 KLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVT 83 (362)
T ss_dssp ECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCC
T ss_pred ccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCcc
Confidence 344444444444444444444444444444444333 3334444 44444444444444444333332 4444
Q ss_pred EEECccCCCCcCCChhccC----C-CCCCEEEccCCCCC
Q 004979 194 TLLLDNNQYLGGISPELHV----L-KVISEIQVDESWLT 227 (721)
Q Consensus 194 ~l~l~~N~~~G~iP~~~~~----l-~~L~~l~l~~n~~~ 227 (721)
+|+|++|.+++..+..++. + ++|+.|+|++|.++
T Consensus 84 ~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~ 122 (362)
T 3goz_A 84 SLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFS 122 (362)
T ss_dssp EEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGG
T ss_pred EEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCC
Confidence 4444444444444332222 1 44444444444444
No 391
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=98.70 E-value=4.6e-09 Score=112.89 Aligned_cols=111 Identities=20% Similarity=0.149 Sum_probs=80.0
Q ss_pred cEEEEEeCCCCCCCcCc----hhhcCCC-CCCEEEccCCcccccCchhhcCC-----CCCCEeEcccCcccccCCcccc-
Q 004979 119 KVVILNLRDLCLGGMLA----PELGQLS-ELKSIILRNNSFFGTIPKEIGEL-----KELEILDLGFNNFSGPFPSDFG- 187 (721)
Q Consensus 119 ~v~~l~L~~~~l~G~ip----~~l~~l~-~L~~L~L~~n~l~G~ip~~l~~l-----~~L~~l~ls~N~l~G~iP~~~~- 187 (721)
.++.|+|++|.+++.-+ ..+..++ +|++|+|++|.+++..+..+..+ ++|+.|+|++|.+++..+..+.
T Consensus 23 ~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~ 102 (362)
T 3goz_A 23 GVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVK 102 (362)
T ss_dssp TCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHH
T ss_pred CceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHHH
Confidence 47788888888777665 5667777 78888888888887777666654 7888888888888776665443
Q ss_pred ---CC-CCCCEEECccCCCCcCCChhccC-----CCCCCEEEccCCCCCCc
Q 004979 188 ---NS-FSLTTLLLDNNQYLGGISPELHV-----LKVISEIQVDESWLTNA 229 (721)
Q Consensus 188 ---~~-~~L~~l~l~~N~~~G~iP~~~~~-----l~~L~~l~l~~n~~~g~ 229 (721)
.+ ++|++|+|++|.+++..+..++. .++|++|+|++|.+++.
T Consensus 103 ~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~ 153 (362)
T 3goz_A 103 TLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIK 153 (362)
T ss_dssp HHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGS
T ss_pred HHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHH
Confidence 33 77888888888877665554432 35788888888877753
No 392
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=98.70 E-value=6.6e-09 Score=119.39 Aligned_cols=109 Identities=17% Similarity=0.245 Sum_probs=72.3
Q ss_pred CCCCceeeEE--------eCCCcEEEEEeCCCCCCCcCchhhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccC
Q 004979 105 VNPCSWFGVE--------CSDGKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFN 176 (721)
Q Consensus 105 ~~~C~w~gv~--------C~~~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N 176 (721)
.+||.|.|.. |....++.|+|++++|+ .||..+. ++|+.|+|++|.++ .||. .+++|+.|+|++|
T Consensus 19 ~~~~~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N 91 (622)
T 3g06_A 19 APAEESRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGN 91 (622)
T ss_dssp CCGGGHHHHHHHHHHHHHHHHHCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSC
T ss_pred CCcchhccccccCcccccccCCCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCC
Confidence 3678886643 22345778888888887 7776665 67888888888877 5665 5677888888888
Q ss_pred cccccCCccccCCCCCCEEECccCCCCcCCChhccCCCCCCEEEccCCCCCC
Q 004979 177 NFSGPFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLTN 228 (721)
Q Consensus 177 ~l~G~iP~~~~~~~~L~~l~l~~N~~~G~iP~~~~~l~~L~~l~l~~n~~~g 228 (721)
+++ .||. .+++|++|+|++|++++ +|. .+.+|+.|+|++|.+++
T Consensus 92 ~l~-~lp~---~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~~ 135 (622)
T 3g06_A 92 QLT-SLPV---LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGNQLTS 135 (622)
T ss_dssp CCS-CCCC---CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSSCCSC
T ss_pred cCC-cCCC---CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCCCCCc
Confidence 877 4665 55667777777776665 343 34445555555555543
No 393
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.61 E-value=4.1e-08 Score=102.64 Aligned_cols=178 Identities=14% Similarity=0.174 Sum_probs=113.8
Q ss_pred CcCCCCceeEEEEEEecCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCC-CCc--cceEeEEEecCCC-ceEEEE
Q 004979 433 GSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN-HKN--FVNLIGYCEEDEP-FTRMMV 508 (721)
Q Consensus 433 ~~lg~G~~g~Vyk~~~~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~-H~n--Iv~l~g~~~~~~~-~~~~lV 508 (721)
..++.|....||+.. ..+++|+... ......+.+|+++|+.+. +.. +.+++......+. ...|+|
T Consensus 26 ~~~~~G~~n~v~~v~----~~~vlR~~~~-------~~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~v 94 (304)
T 3sg8_A 26 EISGEGNDCIAYEIN----RDFIFKFPKH-------SRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAG 94 (304)
T ss_dssp CEEEECSSEEEEEST----TSEEEEEESS-------HHHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEE
T ss_pred EecCCCCcceEEEEC----CEEEEEecCC-------cchHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEE
Confidence 456678888999863 4577776432 123457889999998873 333 3344444433221 134799
Q ss_pred EecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcC-------------------------------------
Q 004979 509 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQL------------------------------------- 551 (721)
Q Consensus 509 ~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~------------------------------------- 551 (721)
|||++|..|.+... ..++..++..++.+++..++.||+.
T Consensus 95 m~~i~G~~l~~~~~----~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (304)
T 3sg8_A 95 FTKIKGVPLTPLLL----NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQM 170 (304)
T ss_dssp EECCCCEECCHHHH----HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHH
T ss_pred EcccCCeECCcccc----ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccH
Confidence 99999988865322 2356667777788888888777751
Q ss_pred -------------------CCCeEeeCCCCCCeEeCC--CCcEEEeccCCCCCCCCC-----Cccc---cchhhc----c
Q 004979 552 -------------------TPPIAHRNLQSSSIYLTE--DYAAKISDFSFWNNTTAA-----KTGS---AAMELL----E 598 (721)
Q Consensus 552 -------------------~~~IvHrDLKp~NILl~~--~~~~kL~DFGla~~~~~~-----~~~~---~apE~~----~ 598 (721)
.+.++|+|+++.||++++ ...+.|.||+.+...... .... ..++.. .
T Consensus 171 ~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~ 250 (304)
T 3sg8_A 171 KKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILN 250 (304)
T ss_dssp HHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHH
Confidence 134899999999999998 556889999976432211 0000 122211 1
Q ss_pred c-CCC---------CCCccHHHHHHHHHHHHhCCCcc
Q 004979 599 T-SAV---------DLESNVYSFGTILFEMITGRISY 625 (721)
Q Consensus 599 ~-~~~---------s~ksDVwSfGvvL~ElltG~~P~ 625 (721)
. ... ....+.|++|.++|++.+|..+|
T Consensus 251 ~Y~~~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 251 HYKHKDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp HHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHH
Confidence 0 111 11257899999999999998876
No 394
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=98.50 E-value=1.2e-08 Score=113.04 Aligned_cols=111 Identities=19% Similarity=0.147 Sum_probs=85.2
Q ss_pred CcEEEEEeCCCCCCCc----CchhhcCCCCCCEEEccCCcccccCchhhcC-----CCCCCEeEcccCccccc----CCc
Q 004979 118 GKVVILNLRDLCLGGM----LAPELGQLSELKSIILRNNSFFGTIPKEIGE-----LKELEILDLGFNNFSGP----FPS 184 (721)
Q Consensus 118 ~~v~~l~L~~~~l~G~----ip~~l~~l~~L~~L~L~~n~l~G~ip~~l~~-----l~~L~~l~ls~N~l~G~----iP~ 184 (721)
.++..|+|++|.+++. ++..+..+++|++|+|++|.+++..+..+.. .++|+.|+|++|.+++. +|.
T Consensus 256 ~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~ 335 (461)
T 1z7x_W 256 SRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSS 335 (461)
T ss_dssp CCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHH
T ss_pred CCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHH
Confidence 4788899999988865 6777888889999999999887655444433 26888888888888875 566
Q ss_pred cccCCCCCCEEECccCCCCcCCChhccC-----CCCCCEEEccCCCCCC
Q 004979 185 DFGNSFSLTTLLLDNNQYLGGISPELHV-----LKVISEIQVDESWLTN 228 (721)
Q Consensus 185 ~~~~~~~L~~l~l~~N~~~G~iP~~~~~-----l~~L~~l~l~~n~~~g 228 (721)
.+..+++|+.|+|++|.+++..+..+.. .++|+.|+|++|.+++
T Consensus 336 ~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~ 384 (461)
T 1z7x_W 336 VLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSD 384 (461)
T ss_dssp HHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCH
T ss_pred HHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCCh
Confidence 6777788888888888887665554543 6788888888888875
No 395
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=98.48 E-value=2.3e-07 Score=99.04 Aligned_cols=111 Identities=13% Similarity=0.171 Sum_probs=91.2
Q ss_pred EeCCCcEEEEEeCCCCCCCcCchhhcCCCCCCEEEccCCcccccCch-hhcCCCCCCEeEcccCcccccCCc-cccCCCC
Q 004979 114 ECSDGKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPK-EIGELKELEILDLGFNNFSGPFPS-DFGNSFS 191 (721)
Q Consensus 114 ~C~~~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~l~G~ip~-~l~~l~~L~~l~ls~N~l~G~iP~-~~~~~~~ 191 (721)
.|.. + .++-++++|+ .||..+ .++|+.|+|++|.++ .||+ .+.++++|+.|+|++|++.+.||. .+.++++
T Consensus 8 ~C~~-~--~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~-~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~ 80 (350)
T 4ay9_X 8 HCSN-R--VFLCQESKVT-EIPSDL--PRNAIELRFVLTKLR-VIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPK 80 (350)
T ss_dssp EEET-T--EEEEESTTCC-SCCTTC--CTTCSEEEEESCCCS-EECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTT
T ss_pred EeeC-C--EEEecCCCCC-ccCcCc--CCCCCEEEccCCcCC-CcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchh
Confidence 4643 3 4677888887 678766 468999999999998 5665 689999999999999999999986 4678888
Q ss_pred CCE-EECccCCCCcCCChhccCCCCCCEEEccCCCCCCccc
Q 004979 192 LTT-LLLDNNQYLGGISPELHVLKVISEIQVDESWLTNAAS 231 (721)
Q Consensus 192 L~~-l~l~~N~~~G~iP~~~~~l~~L~~l~l~~n~~~g~~p 231 (721)
|.. +.++.|++++-.|..+..+++|++|++++|.+++..+
T Consensus 81 l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~ 121 (350)
T 4ay9_X 81 LHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPD 121 (350)
T ss_dssp CCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCC
T ss_pred hhhhhcccCCcccccCchhhhhccccccccccccccccCCc
Confidence 765 6677899988778889999999999999999986433
No 396
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.42 E-value=5.2e-08 Score=99.29 Aligned_cols=80 Identities=20% Similarity=0.286 Sum_probs=68.3
Q ss_pred cCCCCCCEEEccCCcccc--cCchhhcCCCCCCEeEcccCcccccCCccccCCC--CCCEEECccCCCCcCCCh------
Q 004979 139 GQLSELKSIILRNNSFFG--TIPKEIGELKELEILDLGFNNFSGPFPSDFGNSF--SLTTLLLDNNQYLGGISP------ 208 (721)
Q Consensus 139 ~~l~~L~~L~L~~n~l~G--~ip~~l~~l~~L~~l~ls~N~l~G~iP~~~~~~~--~L~~l~l~~N~~~G~iP~------ 208 (721)
.++++|+.|+|++|.|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|++|+|++|.+++.+|.
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~ 244 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYIS 244 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHH
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHH
Confidence 468999999999999999 7888889999999999999999975 3344444 999999999999999883
Q ss_pred -hccCCCCCCEEE
Q 004979 209 -ELHVLKVISEIQ 220 (721)
Q Consensus 209 -~~~~l~~L~~l~ 220 (721)
-+..+++|+.||
T Consensus 245 ~il~~~P~L~~LD 257 (267)
T 3rw6_A 245 AIRERFPKLLRLD 257 (267)
T ss_dssp HHHHHCTTCCEES
T ss_pred HHHHHCcccCeEC
Confidence 356788888774
No 397
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=98.41 E-value=2.5e-08 Score=110.46 Aligned_cols=115 Identities=19% Similarity=0.245 Sum_probs=94.5
Q ss_pred CcEEEEEeCCCCCCCc----Cchhh-cCCCCCCEEEccCCccccc----CchhhcCCCCCCEeEcccCcccccCCcccc-
Q 004979 118 GKVVILNLRDLCLGGM----LAPEL-GQLSELKSIILRNNSFFGT----IPKEIGELKELEILDLGFNNFSGPFPSDFG- 187 (721)
Q Consensus 118 ~~v~~l~L~~~~l~G~----ip~~l-~~l~~L~~L~L~~n~l~G~----ip~~l~~l~~L~~l~ls~N~l~G~iP~~~~- 187 (721)
..+..|+|++|.+++. +.+.+ ..+++|++|+|++|.+++. ++..+.++++|+.|+|++|.+++..+..+.
T Consensus 227 ~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~ 306 (461)
T 1z7x_W 227 ASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCE 306 (461)
T ss_dssp TTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHH
T ss_pred CCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHH
Confidence 5788999999998764 22333 3689999999999999875 788888999999999999999876554443
Q ss_pred ----CCCCCCEEECccCCCCcC----CChhccCCCCCCEEEccCCCCCCcccc
Q 004979 188 ----NSFSLTTLLLDNNQYLGG----ISPELHVLKVISEIQVDESWLTNAASR 232 (721)
Q Consensus 188 ----~~~~L~~l~l~~N~~~G~----iP~~~~~l~~L~~l~l~~n~~~g~~p~ 232 (721)
..++|+.|+|++|.+++. +|..+..+++|+.|+|++|.+++..+.
T Consensus 307 ~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~ 359 (461)
T 1z7x_W 307 TLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVR 359 (461)
T ss_dssp HHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHH
T ss_pred HhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHH
Confidence 236999999999999876 677788899999999999999875443
No 398
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.40 E-value=1.1e-07 Score=102.36 Aligned_cols=111 Identities=16% Similarity=0.095 Sum_probs=71.0
Q ss_pred CcEEEEEeCCCCCCCcCchhh-cCCCCCCEEEccCCcccccCchhh-----cCCCCCCEeEcccCcccc----cCCcccc
Q 004979 118 GKVVILNLRDLCLGGMLAPEL-GQLSELKSIILRNNSFFGTIPKEI-----GELKELEILDLGFNNFSG----PFPSDFG 187 (721)
Q Consensus 118 ~~v~~l~L~~~~l~G~ip~~l-~~l~~L~~L~L~~n~l~G~ip~~l-----~~l~~L~~l~ls~N~l~G----~iP~~~~ 187 (721)
..+..|+|++|.++..-...+ ..+.+|+.|+|++|.++..-...+ ...+.|+.|+|++|.++. .++..+.
T Consensus 101 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~ 180 (372)
T 3un9_A 101 HALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLA 180 (372)
T ss_dssp SCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHH
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHh
Confidence 467788888887764322222 234567777888777765433333 245677777887777754 3444556
Q ss_pred CCCCCCEEECccCCCCc----CCChhccCCCCCCEEEccCCCCCC
Q 004979 188 NSFSLTTLLLDNNQYLG----GISPELHVLKVISEIQVDESWLTN 228 (721)
Q Consensus 188 ~~~~L~~l~l~~N~~~G----~iP~~~~~l~~L~~l~l~~n~~~g 228 (721)
.+++|++|+|++|.++. .|+..+...++|+.|+|++|.++.
T Consensus 181 ~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~ 225 (372)
T 3un9_A 181 GNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGD 225 (372)
T ss_dssp TCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCH
T ss_pred cCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCH
Confidence 67777777777777754 234555666777777777777764
No 399
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.34 E-value=1.5e-06 Score=91.50 Aligned_cols=130 Identities=12% Similarity=0.211 Sum_probs=91.8
Q ss_pred hCcCCCCceeEEEEEEecCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCC----CccceEeEEEecCCCceEEE
Q 004979 432 IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNH----KNFVNLIGYCEEDEPFTRMM 507 (721)
Q Consensus 432 i~~lg~G~~g~Vyk~~~~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H----~nIv~l~g~~~~~~~~~~~l 507 (721)
+..++.|....||+. +..+++|+... ......+.+|.++|..+.+ -.+.+++++ + ..++
T Consensus 42 v~~l~~G~~n~vy~v----g~~~vlR~~~~-------~~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~--~~~l 104 (320)
T 3r70_A 42 LRYLSSGDDSDTFLC----NEQYVVKVPKR-------DSVRISQKRELELYRFLENCKLSYQIPAVVYQ----S--DRFN 104 (320)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESS-------HHHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----C--SSCE
T ss_pred EEeCCCCCCceEEEE----CCEEEEEeCCc-------HHHHHHHHHHHHHHHHHHhcCCCCCcceEEec----C--CcEE
Confidence 446678999999998 56677775432 1123458899998888866 223455554 2 3479
Q ss_pred EEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCC-----------------------------------
Q 004979 508 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLT----------------------------------- 552 (721)
Q Consensus 508 V~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~----------------------------------- 552 (721)
||||++|..+..... ..++..++..++.+++..++.||+..
T Consensus 105 vme~i~G~~l~~~~~----~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (320)
T 3r70_A 105 IMKYIKGERITYEQY----HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQL 180 (320)
T ss_dssp EEECCCCBCCCHHHH----TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEeecCCcccccccc----ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhccc
Confidence 999999988864321 23566666777777777777777432
Q ss_pred --------------------------CCeEeeCCCCCCeEeCCCCcEEEeccCCCC
Q 004979 553 --------------------------PPIAHRNLQSSSIYLTEDYAAKISDFSFWN 582 (721)
Q Consensus 553 --------------------------~~IvHrDLKp~NILl~~~~~~kL~DFGla~ 582 (721)
+.++|+|+++.|||++++..+.|.||+.+.
T Consensus 181 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~ 236 (320)
T 3r70_A 181 LTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFN 236 (320)
T ss_dssp CCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCE
T ss_pred ccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccc
Confidence 235999999999999987667999999764
No 400
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.21 E-value=3e-07 Score=98.98 Aligned_cols=110 Identities=13% Similarity=0.128 Sum_probs=73.4
Q ss_pred cEEEEEeCCCCCCCcCchhh-----cCCCCCCEEEccCCcccc----cCchhhcCCCCCCEeEcccCcccc----cCCcc
Q 004979 119 KVVILNLRDLCLGGMLAPEL-----GQLSELKSIILRNNSFFG----TIPKEIGELKELEILDLGFNNFSG----PFPSD 185 (721)
Q Consensus 119 ~v~~l~L~~~~l~G~ip~~l-----~~l~~L~~L~L~~n~l~G----~ip~~l~~l~~L~~l~ls~N~l~G----~iP~~ 185 (721)
++..|+|++|.++..-...+ ...+.|+.|+|++|.++. .++..+..+++|++|||++|.++. .++..
T Consensus 127 ~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~ 206 (372)
T 3un9_A 127 RARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQ 206 (372)
T ss_dssp TEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHH
T ss_pred hccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHH
Confidence 57778888887764433222 245677888888887754 355556677778888888887764 23455
Q ss_pred ccCCCCCCEEECccCCCCc----CCChhccCCCCCCEEEccCCCCCC
Q 004979 186 FGNSFSLTTLLLDNNQYLG----GISPELHVLKVISEIQVDESWLTN 228 (721)
Q Consensus 186 ~~~~~~L~~l~l~~N~~~G----~iP~~~~~l~~L~~l~l~~n~~~g 228 (721)
+...++|+.|+|++|.++. .++..+..+++|++|+|++|.++.
T Consensus 207 L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~ 253 (372)
T 3un9_A 207 LDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSS 253 (372)
T ss_dssp GGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCH
T ss_pred HhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCH
Confidence 6666778888888887764 244445566778888888777664
No 401
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.19 E-value=2.1e-06 Score=88.97 Aligned_cols=75 Identities=15% Similarity=0.236 Sum_probs=56.6
Q ss_pred hCcCCCCceeEEEEEEecCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCC---ccceEeEEEecCCCceEEEE
Q 004979 432 IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHK---NFVNLIGYCEEDEPFTRMMV 508 (721)
Q Consensus 432 i~~lg~G~~g~Vyk~~~~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~---nIv~l~g~~~~~~~~~~~lV 508 (721)
+..++.|.++.||++...+|..++||+...... .....|..|++.|+.++|. .+.+++++. ..++|
T Consensus 20 ~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~-----~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~------~~~lv 88 (288)
T 3d1u_A 20 VAERGHSHRWHLYRVELADGTPLFVKALPDDAP-----ALDGLFRAEALGLDWLGRSFGSPVPQVAGWD------DRTLA 88 (288)
T ss_dssp EEEEEEETTEEEEEEEETTSCEEEEEECCTTCC-----CCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE------TTEEE
T ss_pred eeeeCCcchhheEEEEeCCCCeEEEEecCCCCc-----chhHHHHHHHHHHHHHHhcCCCCcCeEEEec------CcEEE
Confidence 345778999999999988899999998542211 0124689999999999876 477777763 23899
Q ss_pred EecCCCCCh
Q 004979 509 FEYSPNGSL 517 (721)
Q Consensus 509 ~Ey~~~GsL 517 (721)
|||++++.+
T Consensus 89 me~l~g~~~ 97 (288)
T 3d1u_A 89 MEWVDERPP 97 (288)
T ss_dssp EECCCCCCC
T ss_pred EEecccCCC
Confidence 999999875
No 402
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.16 E-value=4.1e-07 Score=104.04 Aligned_cols=110 Identities=11% Similarity=0.060 Sum_probs=52.4
Q ss_pred cEEEEEeCCCCCCCcCchhhcC-CCCCCEEEcc----CCccccc-----CchhhcCCCCCCEeEccc--CcccccCCccc
Q 004979 119 KVVILNLRDLCLGGMLAPELGQ-LSELKSIILR----NNSFFGT-----IPKEIGELKELEILDLGF--NNFSGPFPSDF 186 (721)
Q Consensus 119 ~v~~l~L~~~~l~G~ip~~l~~-l~~L~~L~L~----~n~l~G~-----ip~~l~~l~~L~~l~ls~--N~l~G~iP~~~ 186 (721)
++..|+|..+.+++..+..++. +++|+.|+|+ .|.+++. ++..+.++++|+.|+|+. |.+++..+..+
T Consensus 379 ~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~ 458 (592)
T 3ogk_B 379 ELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYI 458 (592)
T ss_dssp TCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHH
T ss_pred cCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHH
Confidence 4455555555555555544443 5555555554 4455442 333344455555555542 22444433333
Q ss_pred cC-CCCCCEEECccCCCCc-CCChhccCCCCCCEEEccCCCCCC
Q 004979 187 GN-SFSLTTLLLDNNQYLG-GISPELHVLKVISEIQVDESWLTN 228 (721)
Q Consensus 187 ~~-~~~L~~l~l~~N~~~G-~iP~~~~~l~~L~~l~l~~n~~~g 228 (721)
+. +++|+.|+|++|++++ .++..+..+++|+.|+|++|.+++
T Consensus 459 ~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~ 502 (592)
T 3ogk_B 459 GQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSE 502 (592)
T ss_dssp HHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBH
T ss_pred HHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcH
Confidence 32 4445555555555544 233333444555555555555443
No 403
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.14 E-value=9.7e-06 Score=84.65 Aligned_cols=134 Identities=14% Similarity=0.108 Sum_probs=85.3
Q ss_pred CcCCCCceeEEEEEEecCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCC---ccceEeEEEecCCCceEEEEE
Q 004979 433 GSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHK---NFVNLIGYCEEDEPFTRMMVF 509 (721)
Q Consensus 433 ~~lg~G~~g~Vyk~~~~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~---nIv~l~g~~~~~~~~~~~lV~ 509 (721)
..++.|....||+. +..+++|+-.. ......+.+|+++|..+++. .|.+++.++..... ..++||
T Consensus 25 ~~l~~G~~n~v~~v----g~~~VlR~~~~-------~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g-~~~~v~ 92 (306)
T 3tdw_A 25 ESLGEGFRNYAILV----NGDWVFRFPKS-------QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDG-NPFVGY 92 (306)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEESS-------HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTS-CEEEEE
T ss_pred eecCCCcceeEEEE----CCEEEEEecCC-------chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCC-ceEEEE
Confidence 34566777889987 56677776321 12345789999999999653 25566666653222 468999
Q ss_pred ecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhc---------------------------------------
Q 004979 510 EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQ--------------------------------------- 550 (721)
Q Consensus 510 Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~--------------------------------------- 550 (721)
||++|..+.+... ..++...+..++.++++.|+.||+
T Consensus 93 e~i~G~~l~~~~~----~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~ 168 (306)
T 3tdw_A 93 RKVQGQILGEDGM----AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESL 168 (306)
T ss_dssp ECCCSEECHHHHH----TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHH
T ss_pred eccCCeECchhhh----hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhh
Confidence 9999988765211 112333333344444444444432
Q ss_pred -------------------CCCCeEeeCCCCCCeEeCC---CCc-EEEeccCCCC
Q 004979 551 -------------------LTPPIAHRNLQSSSIYLTE---DYA-AKISDFSFWN 582 (721)
Q Consensus 551 -------------------~~~~IvHrDLKp~NILl~~---~~~-~kL~DFGla~ 582 (721)
..+.++|+|+++.|||+++ ++. +.|.||+.+.
T Consensus 169 ~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~ 223 (306)
T 3tdw_A 169 RDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAA 223 (306)
T ss_dssp HHHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCE
T ss_pred HHHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcC
Confidence 2234799999999999997 455 4899999754
No 404
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.07 E-value=9.3e-07 Score=85.23 Aligned_cols=110 Identities=14% Similarity=0.087 Sum_probs=87.3
Q ss_pred CcEEEEEeCCC-CCCCc----CchhhcCCCCCCEEEccCCcccc----cCchhhcCCCCCCEeEcccCccccc----CCc
Q 004979 118 GKVVILNLRDL-CLGGM----LAPELGQLSELKSIILRNNSFFG----TIPKEIGELKELEILDLGFNNFSGP----FPS 184 (721)
Q Consensus 118 ~~v~~l~L~~~-~l~G~----ip~~l~~l~~L~~L~L~~n~l~G----~ip~~l~~l~~L~~l~ls~N~l~G~----iP~ 184 (721)
..++.|+|++| .++.. +...+...+.|++|+|++|.+.. .|...+...+.|+.|+|++|.++.. |..
T Consensus 36 ~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~~ 115 (185)
T 1io0_A 36 PDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVE 115 (185)
T ss_dssp TTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHH
T ss_pred CCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHHH
Confidence 46889999998 88742 45667788999999999999964 2555666778999999999999864 556
Q ss_pred cccCCCCCCEEEC--ccCCCCcC----CChhccCCCCCCEEEccCCCCC
Q 004979 185 DFGNSFSLTTLLL--DNNQYLGG----ISPELHVLKVISEIQVDESWLT 227 (721)
Q Consensus 185 ~~~~~~~L~~l~l--~~N~~~G~----iP~~~~~l~~L~~l~l~~n~~~ 227 (721)
.+...++|++|+| ++|.++.. |-..+...+.|+.|+|+.|.++
T Consensus 116 ~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 116 ALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp GGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 6778889999999 88998754 3445566789999999999875
No 405
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.05 E-value=2.3e-05 Score=79.85 Aligned_cols=124 Identities=11% Similarity=0.139 Sum_probs=82.1
Q ss_pred EEEEEEec-CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCC-CCccceEeEEEecCCCceEEEEEecCCCCChhh
Q 004979 442 TVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN-HKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFE 519 (721)
Q Consensus 442 ~Vyk~~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~-H~nIv~l~g~~~~~~~~~~~lV~Ey~~~GsL~~ 519 (721)
.||+.... ++..+++|+.... ....+.+|+..|+.+. +--|-++++++.+.+ ..++|||++++.++.+
T Consensus 40 ~v~rl~~~~~~~~~~lk~~~~~--------~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~--~~~lvme~l~G~~~~~ 109 (272)
T 4gkh_A 40 TIYRLYGKPNAPELFLKHGKGS--------VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPD--DAWLLTTAIPGKTAFQ 109 (272)
T ss_dssp EEEEEECCTTCCCEEEEEEETH--------HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETT--EEEEEEECCCSEEHHH
T ss_pred eEEEEEecCCCeEEEEEECCCC--------CHhHHHHHHHHHHHhccCCCcCeEEEEEEECC--eEEEEEEeeCCccccc
Confidence 68987754 3556777765321 2346788999888773 333667888888766 6799999999987765
Q ss_pred hhhhccCCCCCHHHHHHHHHHHHHHHHHHhcC------------------------------------------------
Q 004979 520 HLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQL------------------------------------------------ 551 (721)
Q Consensus 520 ~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~------------------------------------------------ 551 (721)
..... ......++.+++..|.-||..
T Consensus 110 ~~~~~------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 183 (272)
T 4gkh_A 110 VLEEY------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKEM 183 (272)
T ss_dssp HHHHC------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHHH
T ss_pred cccCC------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHHHH
Confidence 43210 011223344444444444421
Q ss_pred --------CCCeEeeCCCCCCeEeCCCCcEEEeccCCC
Q 004979 552 --------TPPIAHRNLQSSSIYLTEDYAAKISDFSFW 581 (721)
Q Consensus 552 --------~~~IvHrDLKp~NILl~~~~~~kL~DFGla 581 (721)
.+.++|+|+.+.|||+++++.+-|.||+.+
T Consensus 184 ~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a 221 (272)
T 4gkh_A 184 HKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRV 221 (272)
T ss_dssp HTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTC
T ss_pred HhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccc
Confidence 113799999999999998877789999865
No 406
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=97.94 E-value=1.7e-05 Score=84.80 Aligned_cols=138 Identities=11% Similarity=0.122 Sum_probs=84.4
Q ss_pred CcCCCCceeEEEEEEecCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCc--cceEeEEEecCCCceEEEEEe
Q 004979 433 GSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKN--FVNLIGYCEEDEPFTRMMVFE 510 (721)
Q Consensus 433 ~~lg~G~~g~Vyk~~~~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~n--Iv~l~g~~~~~~~~~~~lV~E 510 (721)
..++.|....+|+... ++..+++|..... ..+.+|+.++..+.... +.++++++...+. ..++|||
T Consensus 47 ~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~----------~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g-~~~lv~e 114 (362)
T 3ovc_A 47 MQLSEGEESRAFSFDV-GGRGYVLRVNSCA----------DGFYKDRYVYRHFASAALPIPEVLDIGEFSES-LTYCISR 114 (362)
T ss_dssp EEEEECSSEEEEEEEE-TTEEEEEEEESCC----------HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSS-CEEEEEE
T ss_pred EECCCCCcceEEEEEE-CCcEEEEEeCCch----------hhHHHHHHHHHHHHhcCCCCceEEEeccCCCC-CeEEEEE
Confidence 4566788889999875 4677888765321 24788888888886533 4567777765432 5689999
Q ss_pred cCCCCChhhh------------------hhhccCCC---------------CCHHHH---------------------HH
Q 004979 511 YSPNGSLFEH------------------LHIQEAEH---------------LDWAMR---------------------LR 536 (721)
Q Consensus 511 y~~~GsL~~~------------------l~~~~~~~---------------l~~~~~---------------------~~ 536 (721)
|+++..+.+. ||...... -.|... ..
T Consensus 115 ~l~G~~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~~~ 194 (362)
T 3ovc_A 115 RAQGVTLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSAS 194 (362)
T ss_dssp CCCSEETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTHHH
T ss_pred ecCCCCcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhccccc
Confidence 9997655321 11110000 011111 11
Q ss_pred HHHHHHHHHHHHhcC--CCCeEeeCCCCCCeEeCCCCcEEEeccCCCC
Q 004979 537 IAMGMAYCLEHMHQL--TPPIAHRNLQSSSIYLTEDYAAKISDFSFWN 582 (721)
Q Consensus 537 ia~~ia~gL~yLH~~--~~~IvHrDLKp~NILl~~~~~~kL~DFGla~ 582 (721)
....+...++++... .+.++|+|+.+.|||++++..+.|.||+.+.
T Consensus 195 ~~~~~~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~ 242 (362)
T 3ovc_A 195 VAQALDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAM 242 (362)
T ss_dssp HHHHHHHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCE
T ss_pred chHHHHHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCcccc
Confidence 112222233333221 2468999999999999887778899999764
No 407
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=97.80 E-value=3.7e-05 Score=81.83 Aligned_cols=84 Identities=7% Similarity=-0.024 Sum_probs=51.0
Q ss_pred CcC-CCCceeEEEEEEec-------CCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCC-C--CccceEeEEEecCC
Q 004979 433 GSF-SDGTVGTVYKGTLS-------SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN-H--KNFVNLIGYCEEDE 501 (721)
Q Consensus 433 ~~l-g~G~~g~Vyk~~~~-------~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~-H--~nIv~l~g~~~~~~ 501 (721)
..+ +.|....+|+.... ++..+++|+.......... ....+.+|+.+++.++ + -.+.++++++.+.+
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~--~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~ 103 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVF--PTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGD 103 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSS--SCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSST
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccC--chhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCC
Confidence 344 67888999998754 2556777765432100000 0124667888887774 2 34667888776542
Q ss_pred C-ceEEEEEecCCCCChh
Q 004979 502 P-FTRMMVFEYSPNGSLF 518 (721)
Q Consensus 502 ~-~~~~lV~Ey~~~GsL~ 518 (721)
. ...++||||++|..+.
T Consensus 104 ~~g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 104 VLGTPFFLMDYVEGVVPP 121 (357)
T ss_dssp TTSSCEEEEECCCCBCCC
T ss_pred ccCCceEEEEecCCCChh
Confidence 1 1357999999987654
No 408
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=97.79 E-value=1.6e-05 Score=90.66 Aligned_cols=109 Identities=12% Similarity=0.058 Sum_probs=59.4
Q ss_pred cEEEEEeCCCCCCCc----CchhhcCCCCCCEEEccCCccc----ccCchhhcCCCCCCEeEcccCcccccCCccccCCC
Q 004979 119 KVVILNLRDLCLGGM----LAPELGQLSELKSIILRNNSFF----GTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSF 190 (721)
Q Consensus 119 ~v~~l~L~~~~l~G~----ip~~l~~l~~L~~L~L~~n~l~----G~ip~~l~~l~~L~~l~ls~N~l~G~iP~~~~~~~ 190 (721)
++..|+|+++.+++. ++..+..+++|++|+|+.|.++ +.++..+.++++|+.|+|++|.+.+ +|..+.+++
T Consensus 165 ~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~ 243 (592)
T 3ogk_B 165 KIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAA 243 (592)
T ss_dssp TCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCT
T ss_pred CCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhh
Confidence 455566666655443 3334445556666666666654 3444445555666666666665554 444444444
Q ss_pred C---------------------------CCEEECccCCCCcCCChhccCCCCCCEEEccCCCCCCc
Q 004979 191 S---------------------------LTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLTNA 229 (721)
Q Consensus 191 ~---------------------------L~~l~l~~N~~~G~iP~~~~~l~~L~~l~l~~n~~~g~ 229 (721)
+ |+.|+++++ ..+.+|..+..+++|++|+|++|.+++.
T Consensus 244 ~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~-~~~~l~~~~~~~~~L~~L~Ls~~~l~~~ 308 (592)
T 3ogk_B 244 NLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYM-GPNEMPILFPFAAQIRKLDLLYALLETE 308 (592)
T ss_dssp TCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTC-CTTTGGGGGGGGGGCCEEEETTCCCCHH
T ss_pred HHHhhcccccccccchHHHHHHhhccccccccCcccc-chhHHHHHHhhcCCCcEEecCCCcCCHH
Confidence 4 444444443 2345555556666666666666665543
No 409
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=97.66 E-value=5.6e-06 Score=94.50 Aligned_cols=110 Identities=7% Similarity=-0.031 Sum_probs=72.6
Q ss_pred cEEEEEeCCCCCCCcCchhhc-CCCCCCEEEcc--C----Cccc-----ccCchhhcCCCCCCEeEcccCcccccCCccc
Q 004979 119 KVVILNLRDLCLGGMLAPELG-QLSELKSIILR--N----NSFF-----GTIPKEIGELKELEILDLGFNNFSGPFPSDF 186 (721)
Q Consensus 119 ~v~~l~L~~~~l~G~ip~~l~-~l~~L~~L~L~--~----n~l~-----G~ip~~l~~l~~L~~l~ls~N~l~G~iP~~~ 186 (721)
++..|.+.++.+++.....+. .+++|+.|+|+ + |.++ ..++.-+..+++|+.|+|++ ++++..+..+
T Consensus 373 ~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l 451 (594)
T 2p1m_B 373 KLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYI 451 (594)
T ss_dssp TCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHH
T ss_pred hHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHH
Confidence 456667777777776665555 47778888887 3 4554 12333456677778888766 6666555555
Q ss_pred cC-CCCCCEEECccCCCCcCCChhc-cCCCCCCEEEccCCCCCCc
Q 004979 187 GN-SFSLTTLLLDNNQYLGGISPEL-HVLKVISEIQVDESWLTNA 229 (721)
Q Consensus 187 ~~-~~~L~~l~l~~N~~~G~iP~~~-~~l~~L~~l~l~~n~~~g~ 229 (721)
+. +++|+.|+|++|.+++..+..+ ..+++|+.|+|++|.+++.
T Consensus 452 ~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~ 496 (594)
T 2p1m_B 452 GTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDK 496 (594)
T ss_dssp HHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHH
T ss_pred HHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHH
Confidence 54 6777777777777766555444 5577777777777777543
No 410
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=97.63 E-value=2.3e-05 Score=75.37 Aligned_cols=96 Identities=14% Similarity=0.130 Sum_probs=77.3
Q ss_pred CchhhcCCCCCCEEEccCC-cccc----cCchhhcCCCCCCEeEcccCccccc----CCccccCCCCCCEEECccCCCCc
Q 004979 134 LAPELGQLSELKSIILRNN-SFFG----TIPKEIGELKELEILDLGFNNFSGP----FPSDFGNSFSLTTLLLDNNQYLG 204 (721)
Q Consensus 134 ip~~l~~l~~L~~L~L~~n-~l~G----~ip~~l~~l~~L~~l~ls~N~l~G~----iP~~~~~~~~L~~l~l~~N~~~G 204 (721)
+...+...+.|++|+|++| .+.. .+...+...+.|+.|+|++|.++.. |...+...++|++|+|++|.++.
T Consensus 28 l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~ 107 (185)
T 1io0_A 28 LKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISG 107 (185)
T ss_dssp HHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCH
T ss_pred HHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCH
Confidence 4556778999999999999 8864 2556677889999999999999752 34455667899999999999975
Q ss_pred C----CChhccCCCCCCEEEc--cCCCCCCc
Q 004979 205 G----ISPELHVLKVISEIQV--DESWLTNA 229 (721)
Q Consensus 205 ~----iP~~~~~l~~L~~l~l--~~n~~~g~ 229 (721)
. |...+...+.|++|+| ++|.++..
T Consensus 108 ~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~ 138 (185)
T 1io0_A 108 SGILALVEALQSNTSLIELRIDNQSQPLGNN 138 (185)
T ss_dssp HHHHHHHHGGGGCSSCCEEECCCCSSCCCHH
T ss_pred HHHHHHHHHHHhCCCceEEEecCCCCCCCHH
Confidence 3 5566778899999999 88988753
No 411
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=97.62 E-value=2.6e-05 Score=88.89 Aligned_cols=106 Identities=11% Similarity=0.107 Sum_probs=80.4
Q ss_pred CcEEEEEeCCCCCCCcCchhhc-CCCCCCEEEccCC-ccccc-CchhhcCCCCCCEeEcccCcccccCCccc----cCCC
Q 004979 118 GKVVILNLRDLCLGGMLAPELG-QLSELKSIILRNN-SFFGT-IPKEIGELKELEILDLGFNNFSGPFPSDF----GNSF 190 (721)
Q Consensus 118 ~~v~~l~L~~~~l~G~ip~~l~-~l~~L~~L~L~~n-~l~G~-ip~~l~~l~~L~~l~ls~N~l~G~iP~~~----~~~~ 190 (721)
.+++.|+|+++.+++..+..+. .+++|+.|+|++| .++.. ++..+.++++|+.|+|++|.+++..+..+ ..++
T Consensus 105 ~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~ 184 (594)
T 2p1m_B 105 TWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYT 184 (594)
T ss_dssp TTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCC
T ss_pred CCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCC
Confidence 4788899999988887777776 6899999999998 55543 55555689999999999999887554433 3677
Q ss_pred CCCEEECccCCCCcCCCh-----hccCCCCCCEEEccCCC
Q 004979 191 SLTTLLLDNNQYLGGISP-----ELHVLKVISEIQVDESW 225 (721)
Q Consensus 191 ~L~~l~l~~N~~~G~iP~-----~~~~l~~L~~l~l~~n~ 225 (721)
+|+.|++++|. +.++. -+..+++|+.|+|++|.
T Consensus 185 ~L~~L~l~~~~--~~~~~~~l~~l~~~~~~L~~L~L~~~~ 222 (594)
T 2p1m_B 185 SLVSLNISCLA--SEVSFSALERLVTRCPNLKSLKLNRAV 222 (594)
T ss_dssp CCCEEECTTCC--SCCCHHHHHHHHHHCTTCCEEECCTTS
T ss_pred cCcEEEecccC--CcCCHHHHHHHHHhCCCCcEEecCCCC
Confidence 89999999886 33332 23457899999998883
No 412
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.53 E-value=0.00021 Score=77.22 Aligned_cols=80 Identities=10% Similarity=0.028 Sum_probs=46.7
Q ss_pred hCcCCCCceeEEEEEEec-CCcEEEEEEeeeccc-c-chhhHHHHHHHHHHHHHhcCCC--Cc-cceEeEEEecCCCceE
Q 004979 432 IGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSR-A-DWSKNLESQFRKKIDTLSKVNH--KN-FVNLIGYCEEDEPFTR 505 (721)
Q Consensus 432 i~~lg~G~~g~Vyk~~~~-~~~~vavk~~~~~~~-~-~~~~~~~~~f~~Ei~~l~~l~H--~n-Iv~l~g~~~~~~~~~~ 505 (721)
+..+|.|..+.||+++.. ++..++||......+ . ........++..|++++..+.. +. +.+++.+. .+ ..
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~d--~~--~~ 110 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD--TE--MA 110 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE--TT--TT
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEEc--CC--cc
Confidence 346788999999999754 467888987643221 0 0000112346778888887632 33 34565543 22 23
Q ss_pred EEEEecCCCC
Q 004979 506 MMVFEYSPNG 515 (721)
Q Consensus 506 ~lV~Ey~~~G 515 (721)
++||||+++.
T Consensus 111 ~lvmE~l~g~ 120 (397)
T 2olc_A 111 VTVMEDLSHL 120 (397)
T ss_dssp EEEECCCTTS
T ss_pred EEEEEeCCCc
Confidence 7999999763
No 413
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.45 E-value=0.00069 Score=71.13 Aligned_cols=30 Identities=17% Similarity=0.308 Sum_probs=26.6
Q ss_pred CCCeEeeCCCCCCeEeCCCCcEEEeccCCC
Q 004979 552 TPPIAHRNLQSSSIYLTEDYAAKISDFSFW 581 (721)
Q Consensus 552 ~~~IvHrDLKp~NILl~~~~~~kL~DFGla 581 (721)
.+.++|+|+++.|||++.++.+.|.||+.+
T Consensus 221 ~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a 250 (346)
T 2q83_A 221 SPNLCHQDYGTGNTLLGENEQIWVIDLDTV 250 (346)
T ss_dssp SCCEECSSCSTTSEEECGGGCEEECCCTTC
T ss_pred cCceecCCCCcccEEEeCCCcEEEEehhhc
Confidence 346999999999999988889999999864
No 414
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=97.39 E-value=3.2e-05 Score=82.59 Aligned_cols=109 Identities=15% Similarity=0.135 Sum_probs=71.3
Q ss_pred CcEEEEEeCCCCCCCcCchhhcCCCCCCEEEccCCcccccCchhhc--CCCCCCEeEccc--Cccccc--C---Cccc--
Q 004979 118 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIG--ELKELEILDLGF--NNFSGP--F---PSDF-- 186 (721)
Q Consensus 118 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~l~G~ip~~l~--~l~~L~~l~ls~--N~l~G~--i---P~~~-- 186 (721)
.++..|+|+++. .-.+++ + .+++|+.|+|..+.++...-..++ .+++|+.|+|+. |...|. + -..+
T Consensus 172 P~L~~L~L~g~~-~l~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~ 248 (362)
T 2ra8_A 172 PLLNNLKIKGTN-NLSIGK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSK 248 (362)
T ss_dssp TTCCEEEEECCB-TCBCCS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCT
T ss_pred CCCcEEEEeCCC-Cceecc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhc
Confidence 468888887762 113443 3 378888998888887655444554 688888888863 332222 1 1112
Q ss_pred cCCCCCCEEECccCCCCcCCChhcc---CCCCCCEEEccCCCCCCc
Q 004979 187 GNSFSLTTLLLDNNQYLGGISPELH---VLKVISEIQVDESWLTNA 229 (721)
Q Consensus 187 ~~~~~L~~l~l~~N~~~G~iP~~~~---~l~~L~~l~l~~n~~~g~ 229 (721)
..+++|++|+|.+|.+.+..+..+. .+++|+.|+|+.|.+++.
T Consensus 249 ~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~ 294 (362)
T 2ra8_A 249 DRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDE 294 (362)
T ss_dssp TTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHH
T ss_pred CCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChH
Confidence 2478888888888888765444343 467888888888888764
No 415
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.33 E-value=0.00033 Score=72.15 Aligned_cols=75 Identities=17% Similarity=0.269 Sum_probs=51.1
Q ss_pred hCcCCCCceeEEEEEEecCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCC---ccceEeEEEecCCCceEEEE
Q 004979 432 IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHK---NFVNLIGYCEEDEPFTRMMV 508 (721)
Q Consensus 432 i~~lg~G~~g~Vyk~~~~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~---nIv~l~g~~~~~~~~~~~lV 508 (721)
+..+|.|..+.||+.+..+|+.+.||+....... ....|..|++.|+.+.-. -+.+++++. . .++|
T Consensus 20 v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~-----~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~--~----~~lv 88 (288)
T 3f7w_A 20 VAERGHSHRWHLYRVELADGTPLFVKALPDDAPA-----LDGLFRAEALGLDWLGRSFGSPVPQVAGWD--D----RTLA 88 (288)
T ss_dssp EEEEEEETTEEEEEEEETTSCEEEEEECCTTCCC-----CTTHHHHHHHHHHHHTCSTTCCSCCEEEEE--T----TEEE
T ss_pred EEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcc-----hhhHHHHHHHHHHHHHhhCCCCcceEEecc--C----ceEE
Confidence 4567789999999999999999999975432211 123578899888877422 244554432 2 2789
Q ss_pred EecCCCCCh
Q 004979 509 FEYSPNGSL 517 (721)
Q Consensus 509 ~Ey~~~GsL 517 (721)
|||++.+..
T Consensus 89 ~e~l~~~~~ 97 (288)
T 3f7w_A 89 MEWVDERPP 97 (288)
T ss_dssp EECCCCCCC
T ss_pred EEeecccCC
Confidence 999987654
No 416
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.32 E-value=0.00083 Score=69.99 Aligned_cols=135 Identities=17% Similarity=0.229 Sum_probs=87.1
Q ss_pred CcCCCCceeEEEEEEecCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCC---CCccceEeEEEecCCCceEEEEE
Q 004979 433 GSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN---HKNFVNLIGYCEEDEPFTRMMVF 509 (721)
Q Consensus 433 ~~lg~G~~g~Vyk~~~~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~---H~nIv~l~g~~~~~~~~~~~lV~ 509 (721)
..++.|....+|+.... +..+++|+.... ....|..|++.|+.+. ...+.++++++...+ ..++||
T Consensus 42 ~~l~gG~~n~~y~v~~~-~~~~vlK~~~~~--------~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g--~~~lvm 110 (312)
T 3jr1_A 42 EKLYSGEMNEIWLINDE-VQTVFVKINERS--------YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQG--HSFLLL 110 (312)
T ss_dssp EEECCSSSSEEEEEESS-SCEEEEEEEEGG--------GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSS--EEEEEE
T ss_pred EEeCCccceeeeEEEEC-CCeEEEEeCCcc--------cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCC--ceEEEE
Confidence 45678888999998764 567788765421 1356888988888873 356788888887655 579999
Q ss_pred ecCCCCChhh-----------hhhhccC-C-------------------CCCHHHHH---HHHH----------------
Q 004979 510 EYSPNGSLFE-----------HLHIQEA-E-------------------HLDWAMRL---RIAM---------------- 539 (721)
Q Consensus 510 Ey~~~GsL~~-----------~l~~~~~-~-------------------~l~~~~~~---~ia~---------------- 539 (721)
||+++..+.. .||.... . .-+|.... ++..
T Consensus 111 e~l~G~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~ 190 (312)
T 3jr1_A 111 EALNKSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNID 190 (312)
T ss_dssp ECCCCCCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHH
T ss_pred EeccCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHH
Confidence 9999876521 1232111 0 12464321 1111
Q ss_pred HHH-HHHHHH--hcCCCCeEeeCCCCCCeEeCCCCcEEEeccC
Q 004979 540 GMA-YCLEHM--HQLTPPIAHRNLQSSSIYLTEDYAAKISDFS 579 (721)
Q Consensus 540 ~ia-~gL~yL--H~~~~~IvHrDLKp~NILl~~~~~~kL~DFG 579 (721)
.+. .....| |...+.++|+|+.+.||+++.++ +.|.||.
T Consensus 191 ~l~~~l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 191 LIVQIVADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHHHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHHHHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 111 112334 23346799999999999999887 8899974
No 417
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=96.93 E-value=0.0016 Score=68.35 Aligned_cols=83 Identities=20% Similarity=0.181 Sum_probs=59.7
Q ss_pred CCCCCCEEEccCCcccccCch-hhcCCCCCCEeEcccCcccccCC-ccccCCCCCC-EEECccCCCCcCCC-hhccCCCC
Q 004979 140 QLSELKSIILRNNSFFGTIPK-EIGELKELEILDLGFNNFSGPFP-SDFGNSFSLT-TLLLDNNQYLGGIS-PELHVLKV 215 (721)
Q Consensus 140 ~l~~L~~L~L~~n~l~G~ip~-~l~~l~~L~~l~ls~N~l~G~iP-~~~~~~~~L~-~l~l~~N~~~G~iP-~~~~~l~~ 215 (721)
.+++|+.|+|++|+++ .||. .+.+|++|+.|+|++| ++ .|+ ..|.+|.+|+ .+++.+ +++ .|+ ..+..|.+
T Consensus 224 ~~~~L~~l~L~~n~i~-~I~~~aF~~~~~L~~l~l~~n-i~-~I~~~aF~~~~~L~~~l~l~~-~l~-~I~~~aF~~c~~ 298 (329)
T 3sb4_A 224 YMPNLVSLDISKTNAT-TIPDFTFAQKKYLLKIKLPHN-LK-TIGQRVFSNCGRLAGTLELPA-SVT-AIEFGAFMGCDN 298 (329)
T ss_dssp HCTTCCEEECTTBCCC-EECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCTTCCEEEEECT-TCC-EECTTTTTTCTT
T ss_pred hcCCCeEEECCCCCcc-eecHhhhhCCCCCCEEECCcc-cc-eehHHHhhCChhccEEEEEcc-cce-EEchhhhhCCcc
Confidence 3778888888888877 4444 5777888888888887 55 354 4577888888 888876 443 333 45677888
Q ss_pred CCEEEccCCCCC
Q 004979 216 ISEIQVDESWLT 227 (721)
Q Consensus 216 L~~l~l~~n~~~ 227 (721)
|+.++++.|.++
T Consensus 299 L~~l~l~~n~i~ 310 (329)
T 3sb4_A 299 LRYVLATGDKIT 310 (329)
T ss_dssp EEEEEECSSCCC
T ss_pred CCEEEeCCCccC
Confidence 888888888776
No 418
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=96.88 E-value=0.00056 Score=72.92 Aligned_cols=110 Identities=15% Similarity=0.124 Sum_probs=67.5
Q ss_pred CcEEEEEeCCCCC---------CCcCchhhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccCcccccCCcccc-
Q 004979 118 GKVVILNLRDLCL---------GGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFG- 187 (721)
Q Consensus 118 ~~v~~l~L~~~~l---------~G~ip~~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N~l~G~iP~~~~- 187 (721)
.++..|.+.++.. .+.+.+-+..+++|+.|+|++|.- -.+|+ + .+++|+.|+|..+.++...-..+.
T Consensus 139 ~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~-l~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~ 215 (362)
T 2ra8_A 139 AHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNN-LSIGK-K-PRPNLKSLEIISGGLPDSVVEDILG 215 (362)
T ss_dssp TTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBT-CBCCS-C-BCTTCSEEEEECSBCCHHHHHHHHH
T ss_pred chhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCC-ceecc-c-cCCCCcEEEEecCCCChHHHHHHHH
Confidence 3566666655433 234666677788888888887731 13443 3 378888888888776654333343
Q ss_pred -CCCCCCEEECcc--CCCCcC--C---Chhc--cCCCCCCEEEccCCCCCCcc
Q 004979 188 -NSFSLTTLLLDN--NQYLGG--I---SPEL--HVLKVISEIQVDESWLTNAA 230 (721)
Q Consensus 188 -~~~~L~~l~l~~--N~~~G~--i---P~~~--~~l~~L~~l~l~~n~~~g~~ 230 (721)
.+++|+.|+|+. |...|. + -+.+ ..+++|++|+|..|.+++..
T Consensus 216 ~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~ 268 (362)
T 2ra8_A 216 SDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVV 268 (362)
T ss_dssp SBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHH
T ss_pred ccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHH
Confidence 678888888753 332222 1 1112 24678888888888877543
No 419
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=96.68 E-value=0.0025 Score=65.85 Aligned_cols=29 Identities=10% Similarity=0.096 Sum_probs=24.1
Q ss_pred CCeEeeCCCCCCeEeCCCCcEEEeccCCCC
Q 004979 553 PPIAHRNLQSSSIYLTEDYAAKISDFSFWN 582 (721)
Q Consensus 553 ~~IvHrDLKp~NILl~~~~~~kL~DFGla~ 582 (721)
+.++|+|+.+.||+ ..++.+.|.||..+.
T Consensus 173 ~~l~HgDl~~~Nil-~~~~~~~lID~e~a~ 201 (301)
T 3dxq_A 173 LAACHCDPLCENFL-DTGERMWIVDWEYSG 201 (301)
T ss_dssp CEEECSCCCGGGEE-ECSSCEEECCCTTCE
T ss_pred ceeeccCCCcCCEE-ECCCCEEEEeccccc
Confidence 35899999999999 556678999998654
No 420
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.61 E-value=0.0069 Score=63.45 Aligned_cols=30 Identities=13% Similarity=0.227 Sum_probs=25.9
Q ss_pred CCeEeeCCCCCCeEeCCC----CcEEEeccCCCC
Q 004979 553 PPIAHRNLQSSSIYLTED----YAAKISDFSFWN 582 (721)
Q Consensus 553 ~~IvHrDLKp~NILl~~~----~~~kL~DFGla~ 582 (721)
+.++|||+.+.|||++.+ ..+.|.||+.+.
T Consensus 183 ~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~ 216 (333)
T 3csv_A 183 MVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAK 216 (333)
T ss_dssp CEEECSCCSGGGEEECTTSCGGGGEEECCCTTCE
T ss_pred CeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcC
Confidence 359999999999999875 689999998754
No 421
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=96.47 E-value=0.008 Score=65.30 Aligned_cols=30 Identities=23% Similarity=0.379 Sum_probs=26.2
Q ss_pred CCeEeeCCCCCCeEeCCCCcEEEeccCCCCC
Q 004979 553 PPIAHRNLQSSSIYLTEDYAAKISDFSFWNN 583 (721)
Q Consensus 553 ~~IvHrDLKp~NILl~~~~~~kL~DFGla~~ 583 (721)
+.++|+|+++.|||+++++ ++|.||+.+..
T Consensus 232 ~~liHGDl~~~Nil~~~~~-~~lID~e~a~~ 261 (420)
T 2pyw_A 232 QALIHGDLHTGSVMVTQDS-TQVIDPEFSFY 261 (420)
T ss_dssp CEEECSCCSGGGEEECSSC-EEECCCTTCEE
T ss_pred CeEEecCCCCCcEEEeCCC-CEEEeCccccc
Confidence 4599999999999999876 99999987653
No 422
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=96.38 E-value=0.0052 Score=64.32 Aligned_cols=83 Identities=13% Similarity=0.135 Sum_probs=56.3
Q ss_pred CCCCCEEEccCCcccccCchhhcCCCCCCEeEcccCcccccCCc-cccCCCCCCEEECccCCCCcCCCh-hccCCCCCC-
Q 004979 141 LSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPS-DFGNSFSLTTLLLDNNQYLGGISP-ELHVLKVIS- 217 (721)
Q Consensus 141 l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N~l~G~iP~-~~~~~~~L~~l~l~~N~~~G~iP~-~~~~l~~L~- 217 (721)
+.+++.+.+.++-....+..-...|++|+.|+|++|+++ .||. .+.+|.+|+.|+|++| +. .|+. .+..+.+|+
T Consensus 201 ~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~-~I~~~aF~~~~~L~~l~l~~n-i~-~I~~~aF~~~~~L~~ 277 (329)
T 3sb4_A 201 PRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNAT-TIPDFTFAQKKYLLKIKLPHN-LK-TIGQRVFSNCGRLAG 277 (329)
T ss_dssp GGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCC-EECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCTTCCE
T ss_pred ccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcc-eecHhhhhCCCCCCEEECCcc-cc-eehHHHhhCChhccE
Confidence 566777776665332222221223788999999988887 5664 5788889999999887 43 4554 467788898
Q ss_pred EEEccCCCCC
Q 004979 218 EIQVDESWLT 227 (721)
Q Consensus 218 ~l~l~~n~~~ 227 (721)
.+.+.. .++
T Consensus 278 ~l~l~~-~l~ 286 (329)
T 3sb4_A 278 TLELPA-SVT 286 (329)
T ss_dssp EEEECT-TCC
T ss_pred EEEEcc-cce
Confidence 888876 443
No 423
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=96.22 E-value=0.01 Score=61.63 Aligned_cols=157 Identities=10% Similarity=0.151 Sum_probs=82.5
Q ss_pred CCCHHHHHHHHhhhh--h--hhCcCCCCceeEEEEEEecCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCc-
Q 004979 415 KLKRSELEAACEDFS--N--IIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKN- 489 (721)
Q Consensus 415 ~~~~~~l~~~~~~~~--~--ii~~lg~G~~g~Vyk~~~~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~n- 489 (721)
.++.+++......|. + -+..++.|....+|+....++ .+++|....... ...+..|+.++..++...
T Consensus 6 ~~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~~-------~~~l~~e~~~l~~L~~~g~ 77 (322)
T 2ppq_A 6 DITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRVE-------KNDLPFFLGLMQHLAAKGL 77 (322)
T ss_dssp CCCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC----------CCHHHHHHHHHHHHHHTTC
T ss_pred cCCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCCC-------HHHHHHHHHHHHHHHHCCC
Confidence 455566666665542 1 123456677789999887655 567776653111 123455666666553212
Q ss_pred -cceEeEE------EecCCCceEEEEEecCCCCChhh--------------hhhhcc----CC---C---CCHHHHHH--
Q 004979 490 -FVNLIGY------CEEDEPFTRMMVFEYSPNGSLFE--------------HLHIQE----AE---H---LDWAMRLR-- 536 (721)
Q Consensus 490 -Iv~l~g~------~~~~~~~~~~lV~Ey~~~GsL~~--------------~l~~~~----~~---~---l~~~~~~~-- 536 (721)
+.+++.. ....+ ..+++|||++|..+.. .+|... .. . ..|.....
T Consensus 78 ~vP~~~~~~~g~~~~~~~g--~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~ 155 (322)
T 2ppq_A 78 SCPLPLPRKDGELLGELSG--RPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKS 155 (322)
T ss_dssp CCCCBCCBTTCCSCEEETT--EEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHH
T ss_pred CCCcccCCCCCCEEEEECC--EEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHH
Confidence 2233321 11112 4589999998865421 122110 00 0 12332110
Q ss_pred ----------HHHHHHHHHHHHhcC-----CCCeEeeCCCCCCeEeCCCCcEEEeccCCC
Q 004979 537 ----------IAMGMAYCLEHMHQL-----TPPIAHRNLQSSSIYLTEDYAAKISDFSFW 581 (721)
Q Consensus 537 ----------ia~~ia~gL~yLH~~-----~~~IvHrDLKp~NILl~~~~~~kL~DFGla 581 (721)
+...+...++++++. ...++|+|+.+.|||++++..+.|.||+.+
T Consensus 156 ~~~~~~~~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a 215 (322)
T 2ppq_A 156 EERADEVEKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFA 215 (322)
T ss_dssp GGGGGGTSTTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTC
T ss_pred HHHHHhhhhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhc
Confidence 111244455555421 235999999999999998766689999864
No 424
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=95.96 E-value=0.018 Score=61.58 Aligned_cols=136 Identities=14% Similarity=0.150 Sum_probs=75.7
Q ss_pred cCCCCceeEEEEEEecC--------CcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCC-CCccceEeEEEecCCCce
Q 004979 434 SFSDGTVGTVYKGTLSS--------GVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN-HKNFVNLIGYCEEDEPFT 504 (721)
Q Consensus 434 ~lg~G~~g~Vyk~~~~~--------~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~-H~nIv~l~g~~~~~~~~~ 504 (721)
.+..|-...+|+....+ +..+.+++..... . ....+.+|.++++.+. +.-..++++++. +
T Consensus 57 ~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~-~-----~~~~~~rE~~vl~~L~~~gv~P~ll~~~~--~--- 125 (379)
T 3feg_A 57 PVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAIL-Q-----GVDSLVLESVMFAILAERSLGPQLYGVFP--E--- 125 (379)
T ss_dssp EC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----C-----CHHHHHHHHHHHHHHHHTTSSCCEEEEET--T---
T ss_pred EcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCcc-c-----hHHHHHHHHHHHHHHHhcCCCCeEEEEcC--C---
Confidence 44457777899988642 4677777642211 0 1234568888887773 222356666653 2
Q ss_pred EEEEEecCCCCChhhh-----------------hhhcc---CCCCC--HHHHHHHHHHHH-------------------H
Q 004979 505 RMMVFEYSPNGSLFEH-----------------LHIQE---AEHLD--WAMRLRIAMGMA-------------------Y 543 (721)
Q Consensus 505 ~~lV~Ey~~~GsL~~~-----------------l~~~~---~~~l~--~~~~~~ia~~ia-------------------~ 543 (721)
.+||||++|..|..- ||... ..... |.+..++..++. .
T Consensus 126 -g~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~ 204 (379)
T 3feg_A 126 -GRLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKD 204 (379)
T ss_dssp -EEEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHH
T ss_pred -ccEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHH
Confidence 289999987655311 12111 11122 344444443332 1
Q ss_pred HHHHH----hc--CCCCeEeeCCCCCCeEeCCC----CcEEEeccCCC
Q 004979 544 CLEHM----HQ--LTPPIAHRNLQSSSIYLTED----YAAKISDFSFW 581 (721)
Q Consensus 544 gL~yL----H~--~~~~IvHrDLKp~NILl~~~----~~~kL~DFGla 581 (721)
.++.| .. ....++|+|+.+.|||++++ +.+.|.||..+
T Consensus 205 ~~~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a 252 (379)
T 3feg_A 205 EMGNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYS 252 (379)
T ss_dssp HHHHHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTC
T ss_pred HHHHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccC
Confidence 23333 22 22359999999999999876 78999999865
No 425
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=95.96 E-value=0.03 Score=58.25 Aligned_cols=158 Identities=9% Similarity=0.048 Sum_probs=83.8
Q ss_pred CCCCHHHHHHHHhhhh-h---hhCcCCCCceeEEEEEEecCCcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCC-
Q 004979 414 PKLKRSELEAACEDFS-N---IIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHK- 488 (721)
Q Consensus 414 ~~~~~~~l~~~~~~~~-~---ii~~lg~G~~g~Vyk~~~~~~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~- 488 (721)
..++.+++....+.+. . -+..++ |....||+....+|..+++|....... . ...+..|+.++..++..
T Consensus 9 ~~l~~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~---~---~~~~~~E~~~~~~L~~~g 81 (328)
T 1zyl_A 9 QTLHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDEDRRRFVVKFYRPERW---T---ADQILEEHQFALQLVNDE 81 (328)
T ss_dssp CCCCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCTTCCCEEEEEECTTTS---C---HHHHHHHHHHHHHHHHTT
T ss_pred CCCCHHHHHHHHHHcCCCCCceEEeec-CcccceEEEEcCCCCEEEEEEcCCCCC---C---HHHHHHHHHHHHHHHHcC
Confidence 4455666666655442 0 112344 666799998776677788887652211 1 23456677777666322
Q ss_pred -ccceEeEE-----EecCCCceEEEEEecCCCCChhh-----h---------hhhcc-------CCCCCHHHH----HHH
Q 004979 489 -NFVNLIGY-----CEEDEPFTRMMVFEYSPNGSLFE-----H---------LHIQE-------AEHLDWAMR----LRI 537 (721)
Q Consensus 489 -nIv~l~g~-----~~~~~~~~~~lV~Ey~~~GsL~~-----~---------l~~~~-------~~~l~~~~~----~~i 537 (721)
.+.+++.. ....+ ..++||||++|..+.. . +|... ....++... ..+
T Consensus 82 ~~vp~~~~~~g~~~~~~~g--~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (328)
T 1zyl_A 82 VPVAAPVAFNGQTLLNHQG--FYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKL 159 (328)
T ss_dssp CSBCCCCCBTTBSCEEETT--EEEEEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHH
T ss_pred CeecceeecCCcEEEEECC--EEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHH
Confidence 23444433 11122 4578999998754321 0 12110 111232211 001
Q ss_pred ---------------HHHHHHHHHHHhc-----CCCCeEeeCCCCCCeEeCCCCcEEEeccCCCC
Q 004979 538 ---------------AMGMAYCLEHMHQ-----LTPPIAHRNLQSSSIYLTEDYAAKISDFSFWN 582 (721)
Q Consensus 538 ---------------a~~ia~gL~yLH~-----~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~ 582 (721)
...+...++.+.+ ....++|+|+++.|||++ + .+.|.||+.+.
T Consensus 160 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~ 222 (328)
T 1zyl_A 160 FEDATLIPSGLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDAR 222 (328)
T ss_dssp HHTCSSSCTTTHHHHHHHHHHHHHHHHHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCC
T ss_pred HhhcCcCCHHHHHHHHHHHHHHHHHHHHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCC
Confidence 1111122333321 233589999999999999 4 89999998653
No 426
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=95.91 E-value=0.034 Score=60.93 Aligned_cols=73 Identities=11% Similarity=0.059 Sum_probs=43.7
Q ss_pred CcCCCCceeEEEEEEecC-CcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCcc-ceEeEEEecCCCceEEEEEe
Q 004979 433 GSFSDGTVGTVYKGTLSS-GVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNF-VNLIGYCEEDEPFTRMMVFE 510 (721)
Q Consensus 433 ~~lg~G~~g~Vyk~~~~~-~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nI-v~l~g~~~~~~~~~~~lV~E 510 (721)
..++.|-...+|+....+ +..+++|+..... ... -+-.+|..++..+...++ .++++++. + .+|||
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~-~~~-----idR~~E~~vl~~L~~~gl~P~ll~~~~--~----G~v~e 181 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKT-DEI-----INREREKKISCILYNKNIAKKIYVFFT--N----GRIEE 181 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-C-CSC-----SCHHHHHHHHHHHTTSSSBCCEEEEET--T----EEEEE
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCCh-hhh-----cCHHHHHHHHHHHHhcCCCCCEEEEeC--C----eEEEE
Confidence 355667788999998765 4667777653221 110 012477888888754444 46777662 2 35999
Q ss_pred cCCCCCh
Q 004979 511 YSPNGSL 517 (721)
Q Consensus 511 y~~~GsL 517 (721)
|+++..|
T Consensus 182 ~I~G~~l 188 (458)
T 2qg7_A 182 FMDGYAL 188 (458)
T ss_dssp CCCSEEC
T ss_pred eeCCccC
Confidence 9987544
No 427
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=95.83 E-value=0.022 Score=62.07 Aligned_cols=72 Identities=15% Similarity=0.202 Sum_probs=45.2
Q ss_pred CcCCCCceeEEEEEEecC--------CcEEEEEEeeeccccchhhHHHHHHHHHHHHHhcCCCCcc-ceEeEEEecCCCc
Q 004979 433 GSFSDGTVGTVYKGTLSS--------GVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNF-VNLIGYCEEDEPF 503 (721)
Q Consensus 433 ~~lg~G~~g~Vyk~~~~~--------~~~vavk~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nI-v~l~g~~~~~~~~ 503 (721)
..++.|....||+....+ +..+.+|+..... . ...+.+|..++..+...++ .++++.+. +
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~----~---~~~li~E~~~l~~L~~~g~~P~l~~~~~--~-- 147 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE----T---ESHLVAESVIFTLLSERHLGPKLYGIFS--G-- 147 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC----C---HHHHHHHHHHHHHHHHTTSSSCEEEEET--T--
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCC----c---HHHHHHHHHHHHHHHhCCCCCcEEEEeC--C--
Confidence 345667778999998753 4677787663211 1 1234578888887743333 56776553 2
Q ss_pred eEEEEEecCCCCCh
Q 004979 504 TRMMVFEYSPNGSL 517 (721)
Q Consensus 504 ~~~lV~Ey~~~GsL 517 (721)
.+|+||+++..|
T Consensus 148 --g~v~e~l~G~~l 159 (429)
T 1nw1_A 148 --GRLEEYIPSRPL 159 (429)
T ss_dssp --EEEECCCCEEEC
T ss_pred --CEEEEEeCCccc
Confidence 389999986443
No 428
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=95.80 E-value=0.0056 Score=57.74 Aligned_cols=33 Identities=9% Similarity=0.046 Sum_probs=15.0
Q ss_pred CCCEEECccCC-CCcCCChhccCCCCCCEEEccC
Q 004979 191 SLTTLLLDNNQ-YLGGISPELHVLKVISEIQVDE 223 (721)
Q Consensus 191 ~L~~l~l~~N~-~~G~iP~~~~~l~~L~~l~l~~ 223 (721)
+|++|+|+++. +|..==..+..+++|+.|+|++
T Consensus 115 ~L~~L~Ls~C~~ITD~Gl~~L~~~~~L~~L~L~~ 148 (176)
T 3e4g_A 115 SMLEMEIISCGNVTDKGIIALHHFRNLKYLFLSD 148 (176)
T ss_dssp HCCEEEEESCTTCCHHHHHHGGGCTTCCEEEEES
T ss_pred CCCEEEcCCCCcCCHHHHHHHhcCCCCCEEECCC
Confidence 45555555542 3321112344555555555554
No 429
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=95.69 E-value=0.013 Score=52.29 Aligned_cols=16 Identities=6% Similarity=0.086 Sum_probs=7.3
Q ss_pred cCCCCCCEEEccCCCC
Q 004979 211 HVLKVISEIQVDESWL 226 (721)
Q Consensus 211 ~~l~~L~~l~l~~n~~ 226 (721)
..+++|+.|+|++|.+
T Consensus 52 ~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 52 DALPALRTAHLGANPW 67 (130)
T ss_dssp GGCTTCCEEECCSSCC
T ss_pred hhccccCEEEecCCCe
Confidence 3344444444544444
No 430
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=95.65 E-value=0.0045 Score=58.41 Aligned_cols=83 Identities=14% Similarity=0.127 Sum_probs=63.5
Q ss_pred cEEEEEeCCCCCCCcCchhhcCCCCCCEEEccCCc-ccccCchhhcCC----CCCCEeEcccC-cccccCCccccCCCCC
Q 004979 119 KVVILNLRDLCLGGMLAPELGQLSELKSIILRNNS-FFGTIPKEIGEL----KELEILDLGFN-NFSGPFPSDFGNSFSL 192 (721)
Q Consensus 119 ~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~-l~G~ip~~l~~l----~~L~~l~ls~N-~l~G~iP~~~~~~~~L 192 (721)
+++.|||+++.++..=-..+..+++|+.|+|+++. ++..-=..++.+ ++|+.|||+++ ++|..==..+.++++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 69999999998764433457899999999999985 665433456664 47999999996 4765333457789999
Q ss_pred CEEECccCC
Q 004979 193 TTLLLDNNQ 201 (721)
Q Consensus 193 ~~l~l~~N~ 201 (721)
+.|+|++..
T Consensus 142 ~~L~L~~c~ 150 (176)
T 3e4g_A 142 KYLFLSDLP 150 (176)
T ss_dssp CEEEEESCT
T ss_pred CEEECCCCC
Confidence 999999874
No 431
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=95.61 E-value=0.018 Score=61.25 Aligned_cols=27 Identities=26% Similarity=0.455 Sum_probs=22.9
Q ss_pred CeEeeCCCCCCeEeCCCCcEEEeccCCC
Q 004979 554 PIAHRNLQSSSIYLTEDYAAKISDFSFW 581 (721)
Q Consensus 554 ~IvHrDLKp~NILl~~~~~~kL~DFGla 581 (721)
.++|+|+++.|||++++. +.|+||..+
T Consensus 213 ~l~HgDl~~~Nil~~~~~-~~lID~e~a 239 (369)
T 3c5i_A 213 VFCHNDLQENNIINTNKC-LRLIDFEYS 239 (369)
T ss_dssp EEECSCCCGGGEEECC-C-EEECCCTTC
T ss_pred EEEeCCCCcccEEecCCc-EEEEEecCC
Confidence 589999999999998655 899999864
No 432
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=95.25 E-value=0.011 Score=56.89 Aligned_cols=108 Identities=10% Similarity=0.078 Sum_probs=71.5
Q ss_pred CcEEEEEeCCC-CCCC----cCchhhcCCCCCCEEEccCCcccc----cCchhhcCCCCCCEeEcccCccccc----CCc
Q 004979 118 GKVVILNLRDL-CLGG----MLAPELGQLSELKSIILRNNSFFG----TIPKEIGELKELEILDLGFNNFSGP----FPS 184 (721)
Q Consensus 118 ~~v~~l~L~~~-~l~G----~ip~~l~~l~~L~~L~L~~n~l~G----~ip~~l~~l~~L~~l~ls~N~l~G~----iP~ 184 (721)
..++.|+|+++ .++. .|...|..=+.|+.|+|++|.+.- .|-..|..-+.|+.|+|++|+++.. |-.
T Consensus 41 ~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~ 120 (197)
T 1pgv_A 41 TDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLR 120 (197)
T ss_dssp SSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHH
T ss_pred CCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHH
Confidence 46778888875 6652 244566677889999999998863 2344455567899999999988753 223
Q ss_pred cccCCCCCCEEECccC---CCCc----CCChhccCCCCCCEEEccCCC
Q 004979 185 DFGNSFSLTTLLLDNN---QYLG----GISPELHVLKVISEIQVDESW 225 (721)
Q Consensus 185 ~~~~~~~L~~l~l~~N---~~~G----~iP~~~~~l~~L~~l~l~~n~ 225 (721)
.+..-+.|+.|+|++| .+.. .|-..+..-+.|..|+|+.|.
T Consensus 121 aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~ 168 (197)
T 1pgv_A 121 STLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFAS 168 (197)
T ss_dssp HTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCC
T ss_pred HHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCC
Confidence 3445566889998764 2221 133345566788888887664
No 433
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=95.02 E-value=0.045 Score=48.79 Aligned_cols=56 Identities=18% Similarity=0.182 Sum_probs=45.8
Q ss_pred CEEEccCCccc-ccCchhhcCCCCCCEeEcccCcccccCC-ccccCCCCCCEEECccCCCC
Q 004979 145 KSIILRNNSFF-GTIPKEIGELKELEILDLGFNNFSGPFP-SDFGNSFSLTTLLLDNNQYL 203 (721)
Q Consensus 145 ~~L~L~~n~l~-G~ip~~l~~l~~L~~l~ls~N~l~G~iP-~~~~~~~~L~~l~l~~N~~~ 203 (721)
..++.+++.|+ -.||..+. ++|+.|+|++|+|+. || ..+..+++|+.|+|++|.+.
T Consensus 11 ~~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~-l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTA-LPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TEEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSS-CCTTTGGGCTTCCEEECCSSCCB
T ss_pred CEEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCc-cChhhhhhccccCEEEecCCCee
Confidence 47899999997 57776543 479999999999995 55 45678999999999999874
No 434
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=94.95 E-value=0.091 Score=55.10 Aligned_cols=30 Identities=10% Similarity=0.175 Sum_probs=26.3
Q ss_pred CCeEeeCCCCCCeEeCCCCcEEEeccCCCC
Q 004979 553 PPIAHRNLQSSSIYLTEDYAAKISDFSFWN 582 (721)
Q Consensus 553 ~~IvHrDLKp~NILl~~~~~~kL~DFGla~ 582 (721)
..++|+|+.+.||++++++.+.|.||+.+.
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~ 235 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPM 235 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCe
Confidence 359999999999999988889999997643
No 435
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=94.49 E-value=0.14 Score=49.58 Aligned_cols=98 Identities=18% Similarity=0.145 Sum_probs=63.7
Q ss_pred CChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHH-hcCCCCeEeeCCCCCCeEeCCCCcEEEeccCCCCCCCCCCccccc
Q 004979 515 GSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHM-HQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSAA 593 (721)
Q Consensus 515 GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yL-H~~~~~IvHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~a 593 (721)
-+|.++|.. ...++++.++..++.|.+.+|.-+ +...+ ..+=+-|..|++..+|.+...+ +.+. .......+
T Consensus 33 vSL~eIL~~-~~~PlsEEqaWALc~Qc~~~L~~~~~~~~~--~~~i~~~~~i~l~~dG~V~f~~-~~s~---~~~~~~~~ 105 (229)
T 2yle_A 33 LSLEEILRL-YNQPINEEQAWAVCYQCCGSLRAAARRRQP--RHRVRSAAQIRVWRDGAVTLAP-AADD---AGEPPPVA 105 (229)
T ss_dssp EEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHTTCC--CCCCCSGGGEEEETTSCEEECC-C--------------
T ss_pred ccHHHHHHH-cCCCcCHHHHHHHHHHHHHHHHhhhhcccC--CceecCCcceEEecCCceeccc-cccc---ccccCCCC
Confidence 478888864 457899999999999999988776 22111 1222346899999999998875 2211 12234557
Q ss_pred hhhcccCCCCCCccHHHHHHHHHHHHh
Q 004979 594 MELLETSAVDLESNVYSFGTILFEMIT 620 (721)
Q Consensus 594 pE~~~~~~~s~ksDVwSfGvvL~Ellt 620 (721)
||... ...+.+.=|||+|+++|.-+-
T Consensus 106 pe~~~-~~~te~~~IysLG~tLY~ALD 131 (229)
T 2yle_A 106 GKLGY-SQCMETEVIESLGIIIYKALD 131 (229)
T ss_dssp -CCSS-SSSCHHHHHHHHHHHHHHHHT
T ss_pred hhhcc-ccchHHHHHHHHHHHHHHHhh
Confidence 77653 344677789999999998876
No 436
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=93.18 E-value=0.18 Score=54.11 Aligned_cols=78 Identities=10% Similarity=0.042 Sum_probs=34.9
Q ss_pred CCCCEEEccCCcccccCchhhcCCCCCCEeEcccCcccc----cCC-ccccCCCCCCEEECccCCCCcCCC-hhccCCCC
Q 004979 142 SELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSG----PFP-SDFGNSFSLTTLLLDNNQYLGGIS-PELHVLKV 215 (721)
Q Consensus 142 ~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N~l~G----~iP-~~~~~~~~L~~l~l~~N~~~G~iP-~~~~~l~~ 215 (721)
..|+.++|. |++.--=+..+.+|++|+.+++++|.+.. .|+ ..+.+|++|+.++|.+ +++ .|+ ..+..|.+
T Consensus 248 ~~L~~i~lp-~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~~-~i~-~I~~~aF~~c~~ 324 (401)
T 4fdw_A 248 SGITTVKLP-NGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIPE-SIR-ILGQGLLGGNRK 324 (401)
T ss_dssp CCCSEEEEE-TTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCCT-TCC-EECTTTTTTCCS
T ss_pred CCccEEEeC-CCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeCC-ceE-EEhhhhhcCCCC
Confidence 455555552 33331112344555555555555554431 122 2344555555555552 222 222 22344555
Q ss_pred CCEEEcc
Q 004979 216 ISEIQVD 222 (721)
Q Consensus 216 L~~l~l~ 222 (721)
|+.+.|.
T Consensus 325 L~~l~lp 331 (401)
T 4fdw_A 325 VTQLTIP 331 (401)
T ss_dssp CCEEEEC
T ss_pred ccEEEEC
Confidence 5555553
No 437
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=93.01 E-value=0.058 Score=51.74 Aligned_cols=89 Identities=18% Similarity=0.138 Sum_probs=64.2
Q ss_pred hhhcCCCCCCEEEccCC-cccc----cCchhhcCCCCCCEeEcccCccccc----CCccccCCCCCCEEECccCCCCcC-
Q 004979 136 PELGQLSELKSIILRNN-SFFG----TIPKEIGELKELEILDLGFNNFSGP----FPSDFGNSFSLTTLLLDNNQYLGG- 205 (721)
Q Consensus 136 ~~l~~l~~L~~L~L~~n-~l~G----~ip~~l~~l~~L~~l~ls~N~l~G~----iP~~~~~~~~L~~l~l~~N~~~G~- 205 (721)
.-+.+-+.|+.|+|++| .+.. .|-..+..-+.|+.|+|++|++... |-..+..-+.|+.|+|++|++...
T Consensus 35 ~ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~G 114 (197)
T 1pgv_A 35 RLREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPEL 114 (197)
T ss_dssp HHHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHH
T ss_pred HHHhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHH
Confidence 33456688999999986 7642 2445566778999999999999742 223344557899999999998742
Q ss_pred ---CChhccCCCCCCEEEccCC
Q 004979 206 ---ISPELHVLKVISEIQVDES 224 (721)
Q Consensus 206 ---iP~~~~~l~~L~~l~l~~n 224 (721)
|-..+..-..|+.|+|++|
T Consensus 115 a~ala~aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 115 LARLLRSTLVTQSIVEFKADNQ 136 (197)
T ss_dssp HHHHHHHTTTTCCCSEEECCCC
T ss_pred HHHHHHHHhhCCceeEEECCCC
Confidence 3334556678999999865
No 438
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=92.83 E-value=0.29 Score=52.44 Aligned_cols=28 Identities=25% Similarity=0.374 Sum_probs=25.0
Q ss_pred CeEeeCCCCCCeEeCCC------CcEEEeccCCC
Q 004979 554 PIAHRNLQSSSIYLTED------YAAKISDFSFW 581 (721)
Q Consensus 554 ~IvHrDLKp~NILl~~~------~~~kL~DFGla 581 (721)
.++|+|+.+.|||++++ +.+.++||..+
T Consensus 245 v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a 278 (401)
T 3f2s_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYS 278 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSSCEEECCCTTC
T ss_pred eEEeccCCcccEEEcCCcccCcccceEEEeeccC
Confidence 58999999999999876 78999999764
No 439
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=90.43 E-value=0.6 Score=50.01 Aligned_cols=103 Identities=14% Similarity=0.137 Sum_probs=74.1
Q ss_pred cEEEEEeCCCCCCCcCchhhcCCCCCCEEEccCCcccc----cCc-hhhcCCCCCCEeEcccCcccccCC-ccccCCCCC
Q 004979 119 KVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFG----TIP-KEIGELKELEILDLGFNNFSGPFP-SDFGNSFSL 192 (721)
Q Consensus 119 ~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~n~l~G----~ip-~~l~~l~~L~~l~ls~N~l~G~iP-~~~~~~~~L 192 (721)
.+..|.|. +++.---...+.++++|+.++|.+|.+.. .|+ ..+..|++|+.++|++ +++ .|+ ..+.+|++|
T Consensus 249 ~L~~i~lp-~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~~-~i~-~I~~~aF~~c~~L 325 (401)
T 4fdw_A 249 GITTVKLP-NGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIPE-SIR-ILGQGLLGGNRKV 325 (401)
T ss_dssp CCSEEEEE-TTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCCT-TCC-EECTTTTTTCCSC
T ss_pred CccEEEeC-CCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeCC-ceE-EEhhhhhcCCCCc
Confidence 45666774 33432223457889999999999988751 244 4678899999999994 465 454 467889999
Q ss_pred CEEECccCCCCcCCC-hhccCCCCCCEEEccCCCCC
Q 004979 193 TTLLLDNNQYLGGIS-PELHVLKVISEIQVDESWLT 227 (721)
Q Consensus 193 ~~l~l~~N~~~G~iP-~~~~~l~~L~~l~l~~n~~~ 227 (721)
+.+.|..| ++ .|+ ..+.++ +|+.+.+.+|.+.
T Consensus 326 ~~l~lp~~-l~-~I~~~aF~~~-~L~~l~l~~n~~~ 358 (401)
T 4fdw_A 326 TQLTIPAN-VT-QINFSAFNNT-GIKEVKVEGTTPP 358 (401)
T ss_dssp CEEEECTT-CC-EECTTSSSSS-CCCEEEECCSSCC
T ss_pred cEEEECcc-cc-EEcHHhCCCC-CCCEEEEcCCCCc
Confidence 99999666 33 343 356678 9999999999765
No 440
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=90.24 E-value=0.58 Score=50.50 Aligned_cols=27 Identities=19% Similarity=0.434 Sum_probs=24.2
Q ss_pred CeEeeCCCCCCeEeCCCCcEEEeccCCC
Q 004979 554 PIAHRNLQSSSIYLTEDYAAKISDFSFW 581 (721)
Q Consensus 554 ~IvHrDLKp~NILl~~~~~~kL~DFGla 581 (721)
.++|+|+.+.||+ ++++.+.+.||..+
T Consensus 263 ~~~H~D~~~~N~l-~~~~~~~~IDwe~a 289 (424)
T 3mes_A 263 VFAHNDLQENNLL-QTQNNIRMIDYEYS 289 (424)
T ss_dssp EEECSCCCGGGEE-ECSSCEEECCCTTC
T ss_pred eEECCCCCcccee-cCCCcEEEEecccC
Confidence 5899999999999 77889999999765
No 441
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=87.30 E-value=0.42 Score=33.42 Aligned_cols=28 Identities=29% Similarity=0.599 Sum_probs=15.9
Q ss_pred eeehHHHHHHHHHHHHHHH-HHhhhcccc
Q 004979 364 LVLAGIIGGLSLILISAIG-FFVCRSSKV 391 (721)
Q Consensus 364 ~i~~~~~~~~~~~~~~~~~-~~~~r~~~~ 391 (721)
.|+++++++++++++++++ ++++|+|+.
T Consensus 12 ~IA~gVVgGv~~~~ii~~~~~~~~RRr~~ 40 (44)
T 2ks1_B 12 SIATGMVGALLLLLVVALGIGLFMRRRHI 40 (44)
T ss_dssp SSTHHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred eEEeehhHHHHHHHHHHHHHHHHhhhhHh
Confidence 4777887766655444443 455555443
No 442
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=87.12 E-value=1.9 Score=45.97 Aligned_cols=28 Identities=25% Similarity=0.444 Sum_probs=23.5
Q ss_pred eEeeCCCCCCeEe------CCCCcEEEeccCCCC
Q 004979 555 IAHRNLQSSSIYL------TEDYAAKISDFSFWN 582 (721)
Q Consensus 555 IvHrDLKp~NILl------~~~~~~kL~DFGla~ 582 (721)
++|+|+.+.|||+ +++..++++||-++.
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~ 279 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhcc
Confidence 5799999999999 456789999997653
No 443
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=86.27 E-value=0.42 Score=33.35 Aligned_cols=29 Identities=31% Similarity=0.596 Sum_probs=16.1
Q ss_pred eeehHHHHHHHHHHHHHHH-HHhhhccccc
Q 004979 364 LVLAGIIGGLSLILISAIG-FFVCRSSKVV 392 (721)
Q Consensus 364 ~i~~~~~~~~~~~~~~~~~-~~~~r~~~~~ 392 (721)
.|++++++++++++++++. ++++|+|+.+
T Consensus 11 aIA~gVVgGv~~v~ii~~~~~~~~RRRr~~ 40 (44)
T 2l2t_A 11 LIAAGVIGGLFILVIVGLTFAVYVRRKSIK 40 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCSS
T ss_pred eEEEeehHHHHHHHHHHHHHHHHhhhhhhh
Confidence 4677777766654444443 5555554443
No 444
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=81.63 E-value=0.91 Score=31.62 Aligned_cols=26 Identities=8% Similarity=0.333 Sum_probs=10.9
Q ss_pred eehHHHHHHHHHHHHHHHHHhhhccc
Q 004979 365 VLAGIIGGLSLILISAIGFFVCRSSK 390 (721)
Q Consensus 365 i~~~~~~~~~~~~~~~~~~~~~r~~~ 390 (721)
+++++++.+++++++++.+++.|||+
T Consensus 14 Ia~~vVGvll~vi~~l~~~~~~RRR~ 39 (44)
T 2jwa_A 14 IISAVVGILLVVVLGVVFGILIKRRQ 39 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHHHHHHHhheehhh
Confidence 55555553333333333334444433
No 445
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=79.97 E-value=4.6 Score=38.89 Aligned_cols=117 Identities=11% Similarity=0.097 Sum_probs=76.7
Q ss_pred CCCCccceEeEEEecCCCceEEEEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCC
Q 004979 485 VNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSS 564 (721)
Q Consensus 485 l~H~nIv~l~g~~~~~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~IvHrDLKp~N 564 (721)
..||+.+.. .+-.+.+ . +++.|-...+...+-. -..++...+++++..|+..-++++. -+|--|.|+|
T Consensus 42 ~~~~~Fl~~-~I~e~eD--~--v~~~y~~~~~~~~f~~---ik~~~~~eKlr~l~ni~~l~~~~~~----r~tf~L~P~N 109 (215)
T 4ann_A 42 QHSPYFIDA-ELTELRD--S--FQIHYDINDNHTPFDN---IKSFTKNEKLRYLLNIKNLEEVNRT----RYTFVLAPDE 109 (215)
T ss_dssp SCCTTBCCE-EEEECSS--E--EEEEECCCTTSEEGGG---GGGSCHHHHHHHHHHGGGGGGGGGS----SEECCCSGGG
T ss_pred ccCCcccce-EEEEccc--E--EEEEEEcCcccCCHHH---HHhcCHHHHHHHHHHHHHHHHHhcC----ceEEEEecce
Confidence 368888866 4444444 3 4444444444443321 2347788899999999887766554 4577788999
Q ss_pred eEeCCCCcEEEeccCCCCCCCCCCccccchhhcccCCCCCCccHHHHHHHHHHHHhCCCccc
Q 004979 565 IYLTEDYAAKISDFSFWNNTTAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYS 626 (721)
Q Consensus 565 ILl~~~~~~kL~DFGla~~~~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ElltG~~P~~ 626 (721)
|+++.++.+++.-.|+-.... |. ..+..-=.-.+=+++..+++++..|+
T Consensus 110 L~f~~~~~p~i~~RGik~~l~--------P~-----~~~ee~fL~qyKAliiall~~K~~Fe 158 (215)
T 4ann_A 110 LFFTRDGLPIAKTRGLQNVVD--------PL-----PVSEAEFLTRYKALVICAFNEKQSFD 158 (215)
T ss_dssp EEECTTSCEEESCCEETTTBS--------CC-----CCCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred EEEcCCCCEEEEEccCccCCC--------CC-----CCCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 999999999999888643222 11 11111113367788889999998884
No 446
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=75.57 E-value=1.1 Score=30.83 Aligned_cols=26 Identities=35% Similarity=0.814 Sum_probs=12.7
Q ss_pred eeehHHHHHHHHHH-HHHHHHHhhhcc
Q 004979 364 LVLAGIIGGLSLIL-ISAIGFFVCRSS 389 (721)
Q Consensus 364 ~i~~~~~~~~~~~~-~~~~~~~~~r~~ 389 (721)
.+++++++++++++ ++++.++++||+
T Consensus 14 ~I~~~vv~Gv~ll~~iv~~~~~~~rRr 40 (41)
T 2k9y_A 14 AVIGGVAVGVVLLLVLAGVGFFIHRRR 40 (41)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSSSSSC
T ss_pred EEEeehhHHHHHHHHHHHHheeEeeec
Confidence 45556666655544 333334445543
No 447
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=74.72 E-value=0.4 Score=52.48 Aligned_cols=62 Identities=6% Similarity=0.033 Sum_probs=16.4
Q ss_pred hCcCCCCceeEEEEEEecC-CcEEEE------EEeeeccccchhhHHHHHHHHHHHHHhcCCCCccceEeEEEec
Q 004979 432 IGSFSDGTVGTVYKGTLSS-GVEIAV------TSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEE 499 (721)
Q Consensus 432 i~~lg~G~~g~Vyk~~~~~-~~~vav------k~~~~~~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~ 499 (721)
..++| ||.||+|.+.. ...||| |..... .........|.+|..++..++|||+++.+++...
T Consensus 147 ~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~---~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~ 215 (463)
T 3cxl_A 147 YEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQD---GVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH 215 (463)
T ss_dssp TTTSS---BCCC---------CCBGGGC--------------------------------------CBCCCEEEE
T ss_pred cccCC---chhhhcccccccCCchhhhhccCccccccc---cccccccccccccccccccccccccCCCcceEEe
Confidence 34555 88999999864 356777 443321 1222334568889999999999999999887653
No 448
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=72.26 E-value=10 Score=36.52 Aligned_cols=114 Identities=6% Similarity=0.049 Sum_probs=71.5
Q ss_pred CCCccceEeEEEecCCCceEEEEEecCCCCChhhhhhhccCCCCCHHHHHHHHHHHHHHHH-HHhcCCCCeEeeCCCCCC
Q 004979 486 NHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLE-HMHQLTPPIAHRNLQSSS 564 (721)
Q Consensus 486 ~H~nIv~l~g~~~~~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~-yLH~~~~~IvHrDLKp~N 564 (721)
.||++ -..+-.+.+ ...+.|+--+++-=...+ ..++...+++++..|+.... +++. -+|--|.|+|
T Consensus 48 ~~~~f--~~~I~~~eD--~~~i~y~~~~~~~~f~~i-----~~~~~~eKlrll~nl~~L~~~~~~~----r~tf~l~P~N 114 (219)
T 4ano_A 48 VDPCI--VRDIDVSED--EVKVVIKPPSSFLTFAAI-----RKTTLLSRIRAAIHLVSKVKHHSAR----RLIFIVCPEN 114 (219)
T ss_dssp SCSSS--EEEEEECSS--EEEEEEECCTTCEEHHHH-----HTSCHHHHHHHHHHHHHHHSSCCSS----SEECCCCGGG
T ss_pred cCCCC--CeEEEEeCC--EEEEEEEcCcccCcHHHH-----HhcCHHHHHHHHHHHHHHHHHhhhC----ceeEEEeCce
Confidence 67887 233334444 434444443333222222 34778889999999988666 5443 5677788999
Q ss_pred eEeCCCCcEEEeccCCCCCCCCCCccccchhhcccCCCCCCccH-HHHHHHHHHHHhCCCccc
Q 004979 565 IYLTEDYAAKISDFSFWNNTTAAKTGSAAMELLETSAVDLESNV-YSFGTILFEMITGRISYS 626 (721)
Q Consensus 565 ILl~~~~~~kL~DFGla~~~~~~~~~~~apE~~~~~~~s~ksDV-wSfGvvL~ElltG~~P~~ 626 (721)
|++|.++.+++.-.|+-..+ +|.. . ...|. -.+=+++..++.++..|+
T Consensus 115 L~f~~~~~p~i~hRGi~~~l--------pP~e-----~-~ee~fl~qyKali~all~~K~~Fe 163 (219)
T 4ano_A 115 LMFNRALEPFFLHVGVKESL--------PPDE-----W-DDERLLREVKATVLALTEGEYRFD 163 (219)
T ss_dssp EEECTTCCEEESCCEETTTB--------SSCS-----C-CHHHHHHHHHHHHHHHTTCSSCHH
T ss_pred EEEeCCCcEEEEEcCCcccC--------CCCC-----C-CHHHHHHHHHHHHHHHHcCCCCHH
Confidence 99999999999998874322 1211 1 11232 366778888888887763
No 449
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=71.07 E-value=12 Score=39.39 Aligned_cols=82 Identities=15% Similarity=0.199 Sum_probs=49.6
Q ss_pred hhcCCCCCCEEEccCCcccccCc-hhhcCCCCCCEeEcccCcccccCC-ccccCCCCCCEEECccCCCCcCCC-hhccCC
Q 004979 137 ELGQLSELKSIILRNNSFFGTIP-KEIGELKELEILDLGFNNFSGPFP-SDFGNSFSLTTLLLDNNQYLGGIS-PELHVL 213 (721)
Q Consensus 137 ~l~~l~~L~~L~L~~n~l~G~ip-~~l~~l~~L~~l~ls~N~l~G~iP-~~~~~~~~L~~l~l~~N~~~G~iP-~~~~~l 213 (721)
.+.++..|+.+.+..+... |. ..+.+++.|+.+.++. .++ .|+ ..+.+|.+|+.++|..| ++ .|. ..+..+
T Consensus 260 aF~~c~~L~~i~lp~~~~~--I~~~aF~~c~~L~~i~l~~-~i~-~I~~~aF~~c~~L~~i~lp~~-v~-~I~~~aF~~C 333 (394)
T 4gt6_A 260 AFDSCAYLASVKMPDSVVS--IGTGAFMNCPALQDIEFSS-RIT-ELPESVFAGCISLKSIDIPEG-IT-QILDDAFAGC 333 (394)
T ss_dssp TTTTCSSCCEEECCTTCCE--ECTTTTTTCTTCCEEECCT-TCC-EECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTC
T ss_pred eeeecccccEEecccccce--ecCcccccccccccccCCC-ccc-ccCceeecCCCCcCEEEeCCc-cc-EehHhHhhCC
Confidence 3556778888887655432 22 3456677888887763 333 344 34667778888887654 22 232 245567
Q ss_pred CCCCEEEccCC
Q 004979 214 KVISEIQVDES 224 (721)
Q Consensus 214 ~~L~~l~l~~n 224 (721)
.+|+.+.+..+
T Consensus 334 ~~L~~i~ip~s 344 (394)
T 4gt6_A 334 EQLERIAIPSS 344 (394)
T ss_dssp TTCCEEEECTT
T ss_pred CCCCEEEECcc
Confidence 77887777544
No 450
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=70.08 E-value=7.9 Score=40.80 Aligned_cols=80 Identities=19% Similarity=0.059 Sum_probs=41.5
Q ss_pred hcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccCcccccCC-ccccCCCCCCEEECccCCCCcCCC-hhccCCCC
Q 004979 138 LGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFP-SDFGNSFSLTTLLLDNNQYLGGIS-PELHVLKV 215 (721)
Q Consensus 138 l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N~l~G~iP-~~~~~~~~L~~l~l~~N~~~G~iP-~~~~~l~~ 215 (721)
+..+..|+.+.+..+.+. ...+..+.+|+.+.+..| +. .|+ ..+.+|.+|+.++|..+ ++ .|+ ..+.++.+
T Consensus 272 F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~~~-i~-~I~~~aF~~c~~L~~i~lp~~-v~-~I~~~aF~~c~~ 344 (394)
T 4fs7_A 272 FYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLLDS-VK-FIGEEAFESCTSLVSIDLPYL-VE-EIGKRSFRGCTS 344 (394)
T ss_dssp TTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEECTT-CC-EECTTTTTTCTTCCEECCCTT-CC-EECTTTTTTCTT
T ss_pred cccccccceeccCceeec---cccccccccccccccccc-cc-eechhhhcCCCCCCEEEeCCc-cc-EEhHHhccCCCC
Confidence 445566666655544321 113445666776666554 32 233 23556666777766533 22 232 23455666
Q ss_pred CCEEEccCC
Q 004979 216 ISEIQVDES 224 (721)
Q Consensus 216 L~~l~l~~n 224 (721)
|+.+.+..|
T Consensus 345 L~~i~lp~~ 353 (394)
T 4fs7_A 345 LSNINFPLS 353 (394)
T ss_dssp CCEECCCTT
T ss_pred CCEEEECcc
Confidence 666666544
No 451
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=69.63 E-value=4.7 Score=42.55 Aligned_cols=83 Identities=12% Similarity=0.179 Sum_probs=60.7
Q ss_pred hhcCCCCCCEEEccCCcccccCc-hhhcCCCCCCEeEcccCcccccCC-ccccCCCCCCEEECccCCCCcCCCh-hccCC
Q 004979 137 ELGQLSELKSIILRNNSFFGTIP-KEIGELKELEILDLGFNNFSGPFP-SDFGNSFSLTTLLLDNNQYLGGISP-ELHVL 213 (721)
Q Consensus 137 ~l~~l~~L~~L~L~~n~l~G~ip-~~l~~l~~L~~l~ls~N~l~G~iP-~~~~~~~~L~~l~l~~N~~~G~iP~-~~~~l 213 (721)
.+.+++.|+.+.+.. .+. .|+ ..+.+|.+|+.++|..| ++ .|. ..+.+|.+|+.+.+..+ ++ .|.. .+.++
T Consensus 283 aF~~c~~L~~i~l~~-~i~-~I~~~aF~~c~~L~~i~lp~~-v~-~I~~~aF~~C~~L~~i~ip~s-v~-~I~~~aF~~C 356 (394)
T 4gt6_A 283 AFMNCPALQDIEFSS-RIT-ELPESVFAGCISLKSIDIPEG-IT-QILDDAFAGCEQLERIAIPSS-VT-KIPESAFSNC 356 (394)
T ss_dssp TTTTCTTCCEEECCT-TCC-EECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCTTCCEEEECTT-CC-BCCGGGGTTC
T ss_pred ccccccccccccCCC-ccc-ccCceeecCCCCcCEEEeCCc-cc-EehHhHhhCCCCCCEEEECcc-cC-EEhHhHhhCC
Confidence 356789999999863 443 344 35778999999999865 43 343 45788999999999755 33 4553 56789
Q ss_pred CCCCEEEccCCC
Q 004979 214 KVISEIQVDESW 225 (721)
Q Consensus 214 ~~L~~l~l~~n~ 225 (721)
.+|+.+.+.+|.
T Consensus 357 ~~L~~i~~~~~~ 368 (394)
T 4gt6_A 357 TALNNIEYSGSR 368 (394)
T ss_dssp TTCCEEEESSCH
T ss_pred CCCCEEEECCce
Confidence 999999998764
No 452
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=68.05 E-value=12 Score=39.02 Aligned_cols=84 Identities=13% Similarity=0.127 Sum_probs=51.3
Q ss_pred hhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccCcccccCC-ccccCCCCCCEEECccCCCCcCCC-hhccCCC
Q 004979 137 ELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFP-SDFGNSFSLTTLLLDNNQYLGGIS-PELHVLK 214 (721)
Q Consensus 137 ~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N~l~G~iP-~~~~~~~~L~~l~l~~N~~~G~iP-~~~~~l~ 214 (721)
.+.++..|+.+.+..+ ++--=...+.++.+|+.+.+..+ +. .|+ ..+.+|.+|+.+.+.+|.++ .|+ ..+.++.
T Consensus 235 ~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~-~i~~~aF~~c~~L~~i~l~~~~i~-~I~~~aF~~c~ 310 (379)
T 4h09_A 235 AFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VK-TVPYLLCSGCSNLTKVVMDNSAIE-TLEPRVFMDCV 310 (379)
T ss_dssp TTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CS-EECTTTTTTCTTCCEEEECCTTCC-EECTTTTTTCT
T ss_pred cccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ce-eccccccccccccccccccccccc-eehhhhhcCCC
Confidence 3556777888877654 33111234556777888877654 32 233 34567788888888766654 233 3456677
Q ss_pred CCCEEEccCC
Q 004979 215 VISEIQVDES 224 (721)
Q Consensus 215 ~L~~l~l~~n 224 (721)
+|+.+.|..+
T Consensus 311 ~L~~i~lp~~ 320 (379)
T 4h09_A 311 KLSSVTLPTA 320 (379)
T ss_dssp TCCEEECCTT
T ss_pred CCCEEEcCcc
Confidence 8888877543
No 453
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=60.20 E-value=8.7 Score=40.47 Aligned_cols=82 Identities=13% Similarity=0.145 Sum_probs=60.5
Q ss_pred hhcCCCCCCEEEccCCcccccCc-hhhcCCCCCCEeEcccCcccccCC-ccccCCCCCCEEECccCCCCcCCCh-hccCC
Q 004979 137 ELGQLSELKSIILRNNSFFGTIP-KEIGELKELEILDLGFNNFSGPFP-SDFGNSFSLTTLLLDNNQYLGGISP-ELHVL 213 (721)
Q Consensus 137 ~l~~l~~L~~L~L~~n~l~G~ip-~~l~~l~~L~~l~ls~N~l~G~iP-~~~~~~~~L~~l~l~~N~~~G~iP~-~~~~l 213 (721)
.+..+.+|+.+.+..+ +. .|+ ..+.+|.+|+.++|+.+ ++ .|. ..+.+|++|+.+++..| ++ .|+. .+..+
T Consensus 292 ~F~~~~~L~~i~l~~~-i~-~I~~~aF~~c~~L~~i~lp~~-v~-~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~aF~~C 365 (394)
T 4fs7_A 292 TFYGCSSLTEVKLLDS-VK-FIGEEAFESCTSLVSIDLPYL-VE-EIGKRSFRGCTSLSNINFPLS-LR-KIGANAFQGC 365 (394)
T ss_dssp TTTTCTTCCEEEECTT-CC-EECTTTTTTCTTCCEECCCTT-CC-EECTTTTTTCTTCCEECCCTT-CC-EECTTTBTTC
T ss_pred cccccccccccccccc-cc-eechhhhcCCCCCCEEEeCCc-cc-EEhHHhccCCCCCCEEEECcc-cc-EehHHHhhCC
Confidence 4567889999998765 43 343 45778999999999755 44 454 45788999999999776 33 3443 56788
Q ss_pred CCCCEEEccCC
Q 004979 214 KVISEIQVDES 224 (721)
Q Consensus 214 ~~L~~l~l~~n 224 (721)
.+|+.+.+..|
T Consensus 366 ~~L~~i~lp~~ 376 (394)
T 4fs7_A 366 INLKKVELPKR 376 (394)
T ss_dssp TTCCEEEEEGG
T ss_pred CCCCEEEECCC
Confidence 99999998654
No 454
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=55.34 E-value=30 Score=35.78 Aligned_cols=86 Identities=14% Similarity=0.067 Sum_probs=58.5
Q ss_pred hhcCCCCCCEEEccCCcccccCchhhcCCCCCCEeEcccCcccccCC-ccccCCCCCCEEECccCCCCcCCCh-hccCCC
Q 004979 137 ELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFP-SDFGNSFSLTTLLLDNNQYLGGISP-ELHVLK 214 (721)
Q Consensus 137 ~l~~l~~L~~L~L~~n~l~G~ip~~l~~l~~L~~l~ls~N~l~G~iP-~~~~~~~~L~~l~l~~N~~~G~iP~-~~~~l~ 214 (721)
.+..+..|+.+.+..+ +.---...+..+..|+.+.+..+ ++ .|. ..+.++.+|+.+.+..+ +. .|+. .+..+.
T Consensus 212 ~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~-~I~~~aF~~~~~l~~i~l~~~-i~-~i~~~aF~~c~ 286 (379)
T 4h09_A 212 GFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VT-SIGSFLLQNCTALKTLNFYAK-VK-TVPYLLCSGCS 286 (379)
T ss_dssp TTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CC-EECTTTTTTCTTCCEEEECCC-CS-EECTTTTTTCT
T ss_pred ccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-cc-EeCccccceeehhcccccccc-ce-ecccccccccc
Confidence 4556778888887654 22122335677899999999876 43 233 45677889999998654 22 3333 456789
Q ss_pred CCCEEEccCCCCC
Q 004979 215 VISEIQVDESWLT 227 (721)
Q Consensus 215 ~L~~l~l~~n~~~ 227 (721)
+|+.+.+..|.++
T Consensus 287 ~L~~i~l~~~~i~ 299 (379)
T 4h09_A 287 NLTKVVMDNSAIE 299 (379)
T ss_dssp TCCEEEECCTTCC
T ss_pred ccccccccccccc
Confidence 9999999887765
No 455
>1iij_A ERBB-2 receptor protein-tyrosine kinase; alpha-helix-PI-bulge-alpha-helix, signaling protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=52.28 E-value=3.4 Score=27.19 Aligned_cols=7 Identities=29% Similarity=0.952 Sum_probs=4.2
Q ss_pred eehHHHH
Q 004979 365 VLAGIIG 371 (721)
Q Consensus 365 i~~~~~~ 371 (721)
|++++++
T Consensus 10 IaagVvg 16 (35)
T 1iij_A 10 IIATVVG 16 (35)
T ss_dssp HHHHHHH
T ss_pred eHHHHHH
Confidence 5566655
No 456
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=38.76 E-value=20 Score=24.06 Aligned_cols=9 Identities=33% Similarity=0.364 Sum_probs=4.2
Q ss_pred HHHHHhhhc
Q 004979 380 AIGFFVCRS 388 (721)
Q Consensus 380 ~~~~~~~r~ 388 (721)
++.++++||
T Consensus 29 ~l~~~~~rr 37 (38)
T 2k1k_A 29 GILVFRSRR 37 (38)
T ss_dssp HHHHHHHCC
T ss_pred HHHHHHeec
Confidence 334555554
Done!