Query 004987
Match_columns 720
No_of_seqs 760 out of 3613
Neff 7.9
Searched_HMMs 29240
Date Mon Mar 25 11:55:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004987.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004987hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fpq_A Serine/threonine-protei 100.0 2.8E-45 9.6E-50 385.8 14.1 210 63-367 71-289 (290)
2 4g31_A Eukaryotic translation 100.0 1.3E-45 4.6E-50 390.9 11.1 227 63-367 49-286 (299)
3 4fih_A Serine/threonine-protei 100.0 9.2E-45 3.1E-49 389.8 16.6 241 28-368 78-331 (346)
4 4b9d_A Serine/threonine-protei 100.0 2E-45 6.8E-50 395.6 11.4 246 26-367 26-283 (350)
5 3hyh_A Carbon catabolite-derep 100.0 5.1E-45 1.7E-49 380.7 12.3 243 26-367 15-269 (275)
6 4aw0_A HPDK1, 3-phosphoinositi 100.0 7.6E-45 2.6E-49 384.9 9.8 247 26-367 34-297 (311)
7 4fie_A Serine/threonine-protei 100.0 8.3E-44 2.9E-48 391.6 16.9 243 26-368 153-408 (423)
8 3ubd_A Ribosomal protein S6 ki 100.0 4.5E-44 1.6E-48 378.6 12.5 209 62-367 71-288 (304)
9 4g3f_A NF-kappa-beta-inducing 100.0 4.3E-44 1.5E-48 383.4 11.6 215 65-370 98-332 (336)
10 4b99_A Mitogen-activated prote 100.0 5.7E-43 1.9E-47 384.8 13.0 221 63-371 99-355 (398)
11 3omv_A RAF proto-oncogene seri 100.0 3.5E-41 1.2E-45 357.2 13.8 238 29-360 41-293 (307)
12 4f9c_A Cell division cycle 7-r 100.0 7.5E-41 2.6E-45 363.7 14.3 235 63-367 65-359 (361)
13 4gt4_A Tyrosine-protein kinase 100.0 3.6E-40 1.2E-44 350.3 10.8 205 64-361 76-300 (308)
14 4asz_A BDNF/NT-3 growth factor 100.0 9E-40 3.1E-44 345.9 12.1 205 63-360 61-282 (299)
15 3v5w_A G-protein coupled recep 100.0 3E-40 1E-44 379.3 9.0 203 66-367 241-456 (689)
16 4aoj_A High affinity nerve gro 100.0 3.4E-39 1.2E-43 346.1 15.6 205 63-360 89-312 (329)
17 3uto_A Twitchin; kinase, muscl 100.0 8.7E-39 3E-43 367.8 15.6 208 66-369 203-419 (573)
18 4ase_A Vascular endothelial gr 100.0 1E-38 3.5E-43 345.2 10.6 207 64-361 114-341 (353)
19 3hmm_A TGF-beta receptor type- 100.0 1.1E-38 3.6E-43 339.0 8.9 212 61-360 41-290 (303)
20 3fxz_A Serine/threonine-protei 100.0 4.5E-36 1.6E-40 317.5 17.4 209 65-369 65-278 (297)
21 3qd2_B Eukaryotic translation 100.0 1.2E-36 4E-41 325.0 12.7 226 63-366 50-331 (332)
22 3fe3_A MAP/microtubule affinit 100.0 3.1E-36 1.1E-40 323.6 14.3 208 63-368 60-272 (328)
23 2yab_A Death-associated protei 100.0 1.1E-35 3.6E-40 323.7 18.0 207 64-367 62-279 (361)
24 3p1a_A MYT1 kinase, membrane-a 100.0 4E-36 1.4E-40 319.9 13.4 206 65-367 104-311 (311)
25 3g33_A Cell division protein k 100.0 3E-35 1E-39 312.1 17.9 210 66-367 60-303 (308)
26 3o0g_A Cell division protein k 100.0 1E-35 3.5E-40 313.2 14.1 211 63-367 47-289 (292)
27 3ttj_A Mitogen-activated prote 100.0 1.1E-35 3.9E-40 334.2 14.8 213 63-370 107-365 (464)
28 3zgw_A Maternal embryonic leuc 100.0 1.3E-35 4.5E-40 321.2 13.3 209 63-367 54-267 (347)
29 1cm8_A Phosphorylated MAP kina 100.0 2.6E-35 8.9E-40 321.3 15.1 213 63-371 70-318 (367)
30 3niz_A Rhodanese family protei 100.0 4.5E-35 1.5E-39 311.9 16.4 211 64-368 66-308 (311)
31 1tki_A Titin; serine kinase, m 100.0 1.5E-35 5.3E-40 317.2 12.7 208 65-368 49-265 (321)
32 1fot_A TPK1 delta, CAMP-depend 100.0 2.2E-35 7.6E-40 315.6 13.6 201 66-367 55-265 (318)
33 1o6l_A RAC-beta serine/threoni 100.0 3.1E-35 1.1E-39 317.0 14.8 206 64-367 52-267 (337)
34 2y0a_A Death-associated protei 100.0 5.4E-35 1.8E-39 313.5 16.5 207 64-367 61-278 (326)
35 3oz6_A Mitogen-activated prote 100.0 1.5E-35 5.2E-40 325.3 12.2 235 63-370 54-338 (388)
36 2bdw_A Hypothetical protein K1 100.0 3.4E-35 1.2E-39 319.8 14.5 208 63-367 74-291 (362)
37 1ob3_A PFPK5, cell division co 100.0 4.6E-35 1.6E-39 307.8 14.2 209 65-367 48-287 (288)
38 3txo_A PKC-L, NPKC-ETA, protei 100.0 8.1E-36 2.8E-40 323.7 8.7 205 66-367 72-287 (353)
39 3rp9_A Mitogen-activated prote 100.0 2.9E-35 1E-39 330.2 13.4 244 63-370 98-406 (458)
40 3mi9_A Cell division protein k 100.0 1.2E-34 4.1E-39 313.4 17.5 220 63-370 62-321 (351)
41 1t4h_A Serine/threonine-protei 100.0 6.1E-35 2.1E-39 306.8 14.7 210 64-367 72-289 (290)
42 3soa_A Calcium/calmodulin-depe 100.0 5.8E-35 2E-39 326.4 15.1 207 64-366 57-273 (444)
43 3h4j_B AMPK kdaid, SNF1-like p 100.0 6.3E-36 2.2E-40 322.3 6.8 206 63-367 55-265 (336)
44 1rdq_E PKA C-alpha, CAMP-depen 100.0 4E-35 1.4E-39 317.9 13.0 202 65-367 89-300 (350)
45 4aw2_A Serine/threonine-protei 100.0 2.5E-35 8.6E-40 328.4 11.7 208 66-367 123-345 (437)
46 1u5q_A Serine/threonine protei 100.0 4.1E-35 1.4E-39 317.5 12.6 207 64-369 101-314 (348)
47 2eue_A Carbon catabolite derep 100.0 7.1E-35 2.4E-39 303.9 13.5 207 63-367 59-269 (275)
48 1kob_A Twitchin; kinase, intra 100.0 7.9E-35 2.7E-39 319.7 14.5 209 64-368 95-312 (387)
49 3tki_A Serine/threonine-protei 100.0 3.2E-35 1.1E-39 314.9 10.9 211 65-368 53-269 (323)
50 4fr4_A YANK1, serine/threonine 100.0 4.4E-35 1.5E-39 321.2 12.1 206 64-367 62-278 (384)
51 1xjd_A Protein kinase C, theta 100.0 1.5E-35 5.1E-40 320.6 7.7 204 66-367 66-276 (345)
52 4dc2_A Protein kinase C IOTA t 100.0 8.1E-35 2.8E-39 320.3 13.6 205 66-367 101-325 (396)
53 2w4o_A Calcium/calmodulin-depe 100.0 2.8E-34 9.6E-39 311.0 17.6 209 65-369 96-314 (349)
54 2zv2_A Calcium/calmodulin-depe 100.0 1.2E-34 4.2E-39 305.9 13.9 206 65-365 84-297 (298)
55 3nyv_A Calmodulin-domain prote 100.0 2.8E-34 9.7E-39 324.5 17.6 207 63-367 72-288 (484)
56 3c0i_A Peripheral plasma membr 100.0 1.8E-34 6.1E-39 312.7 15.2 208 64-367 73-293 (351)
57 3gni_B Strad alpha; kinase fol 100.0 7.8E-35 2.7E-39 319.6 12.5 218 63-368 72-341 (389)
58 3v8s_A RHO-associated protein 100.0 4E-35 1.4E-39 324.3 10.2 206 66-367 118-336 (410)
59 3mtl_A Cell division protein k 100.0 2.1E-34 7.1E-39 308.4 15.0 214 63-370 46-291 (324)
60 2pmi_A Negative RE, cyclin-dep 100.0 1.8E-34 6.3E-39 307.9 14.4 212 64-369 50-302 (317)
61 2fst_X Mitogen-activated prote 100.0 4.9E-35 1.7E-39 319.3 9.9 213 63-371 74-322 (367)
62 2r5t_A Serine/threonine-protei 100.0 8.8E-35 3E-39 317.8 11.9 204 66-367 87-300 (373)
63 3a8x_A Protein kinase C IOTA t 100.0 1.6E-34 5.6E-39 312.4 13.8 206 65-367 57-282 (345)
64 2c30_A Serine/threonine-protei 100.0 6.5E-34 2.2E-38 304.4 17.8 207 65-368 90-302 (321)
65 3gbz_A Kinase, CMGC CDK; ssgci 100.0 1.5E-34 5.1E-39 310.2 12.6 209 64-367 80-325 (329)
66 3is5_A Calcium-dependent prote 100.0 3.5E-34 1.2E-38 300.7 15.1 208 63-366 66-284 (285)
67 3dbq_A Dual specificity protei 100.0 1E-34 3.5E-39 313.4 11.2 213 64-370 54-283 (343)
68 4ejn_A RAC-alpha serine/threon 100.0 2.8E-34 9.6E-39 321.3 14.9 208 63-367 194-411 (446)
69 3dls_A PAS domain-containing s 100.0 6.2E-34 2.1E-38 306.5 16.9 203 63-369 75-283 (335)
70 2a2a_A Death-associated protei 100.0 7.8E-34 2.7E-38 303.3 17.3 208 64-368 62-280 (321)
71 2x4f_A Myosin light chain kina 100.0 2.2E-34 7.4E-39 314.8 13.3 208 65-367 134-349 (373)
72 2vd5_A DMPK protein; serine/th 100.0 9.8E-35 3.4E-39 321.4 10.6 207 66-367 110-334 (412)
73 3kk8_A Calcium/calmodulin depe 100.0 2.6E-34 8.8E-39 300.7 13.0 211 63-370 51-271 (284)
74 1zy4_A Serine/threonine-protei 100.0 4.9E-34 1.7E-38 300.5 15.1 227 65-367 50-290 (303)
75 1x8b_A WEE1HU, WEE1-like prote 100.0 2E-34 6.7E-39 301.0 12.0 223 63-367 56-286 (289)
76 2zmd_A Dual specificity protei 100.0 1.6E-34 5.4E-39 317.8 11.7 212 64-369 101-329 (390)
77 3mwu_A Calmodulin-domain prote 100.0 8.9E-34 3E-38 320.7 18.1 207 64-368 68-284 (486)
78 3uc3_A Serine/threonine-protei 100.0 4.2E-34 1.4E-38 311.1 14.1 207 65-367 64-281 (361)
79 3n9x_A Phosphotransferase; mal 100.0 3.7E-34 1.3E-38 319.0 14.0 241 63-373 71-374 (432)
80 3pg1_A Mitogen-activated prote 100.0 2.4E-34 8.1E-39 312.3 11.6 219 64-373 76-329 (362)
81 3i6u_A CDS1, serine/threonine- 100.0 2.6E-34 8.8E-39 319.1 11.9 208 63-367 186-406 (419)
82 3rgf_A Cyclin-dependent kinase 100.0 7.3E-34 2.5E-38 313.8 15.3 216 64-368 65-341 (405)
83 2y94_A 5'-AMP-activated protei 100.0 2.8E-34 9.5E-39 323.3 12.1 207 63-367 62-273 (476)
84 3qyz_A Mitogen-activated prote 100.0 1.6E-34 5.4E-39 314.4 9.8 220 63-372 71-325 (364)
85 3a62_A Ribosomal protein S6 ki 100.0 3.5E-34 1.2E-38 307.3 11.9 207 63-367 67-283 (327)
86 3lij_A Calcium/calmodulin depe 100.0 1.1E-33 3.7E-38 320.7 16.4 207 63-367 82-298 (494)
87 3fdn_A Serine/threonine-protei 100.0 1.8E-34 6.3E-39 301.4 9.1 204 65-368 57-265 (279)
88 3ork_A Serine/threonine protei 100.0 9.7E-35 3.3E-39 308.9 6.9 216 63-366 58-279 (311)
89 2i0e_A Protein kinase C-beta I 100.0 1.8E-33 6.2E-38 305.1 17.0 205 65-367 68-283 (353)
90 1ua2_A CAK, cell division prot 100.0 8.3E-34 2.8E-38 306.6 14.0 210 65-368 60-299 (346)
91 3llt_A Serine/threonine kinase 100.0 9.1E-34 3.1E-38 307.4 13.9 202 66-365 80-360 (360)
92 2xrw_A Mitogen-activated prote 100.0 3.9E-34 1.3E-38 312.3 10.8 213 63-370 70-328 (371)
93 4exu_A Mitogen-activated prote 100.0 3.3E-34 1.1E-38 312.9 10.0 214 63-373 87-336 (371)
94 3f3z_A Calcium/calmodulin-depe 100.0 1.9E-33 6.6E-38 293.1 15.3 206 64-367 53-268 (277)
95 3fme_A Dual specificity mitoge 100.0 3.1E-34 1.1E-38 300.8 9.2 207 66-367 55-273 (290)
96 2j7t_A Serine/threonine-protei 100.0 8.6E-34 3E-38 299.4 12.4 212 64-370 63-285 (302)
97 1nxk_A MAP kinase-activated pr 100.0 9E-34 3.1E-38 312.8 12.7 210 66-367 103-328 (400)
98 3cok_A Serine/threonine-protei 100.0 5.8E-34 2E-38 297.2 10.2 208 64-368 58-270 (278)
99 2acx_A G protein-coupled recep 100.0 3.6E-34 1.2E-38 327.5 9.4 206 65-367 232-451 (576)
100 3q5i_A Protein kinase; CDPK, m 100.0 4.9E-33 1.7E-37 316.1 18.7 207 65-369 94-310 (504)
101 3lm5_A Serine/threonine-protei 100.0 8.1E-34 2.8E-38 304.3 11.5 208 64-367 75-294 (327)
102 4agu_A Cyclin-dependent kinase 100.0 7.4E-34 2.5E-38 301.4 11.1 210 65-369 50-293 (311)
103 2ac3_A MAP kinase-interacting 100.0 8.8E-34 3E-38 301.5 11.7 217 63-367 56-302 (316)
104 3pfq_A PKC-B, PKC-beta, protei 100.0 5.4E-34 1.9E-38 334.4 10.9 205 66-367 390-604 (674)
105 4e7w_A Glycogen synthase kinas 100.0 2.2E-33 7.4E-38 309.1 15.0 214 65-369 80-330 (394)
106 3kn6_A Ribosomal protein S6 ki 100.0 1.4E-33 4.7E-38 302.4 12.9 210 64-368 52-278 (325)
107 2r3i_A Cell division protein k 100.0 2.4E-33 8.3E-38 295.5 14.5 213 64-370 49-293 (299)
108 2yex_A Serine/threonine-protei 100.0 2E-33 6.9E-38 292.4 13.2 213 64-369 52-270 (276)
109 3coi_A Mitogen-activated prote 100.0 5.3E-34 1.8E-38 308.7 8.9 213 63-372 69-317 (353)
110 3eb0_A Putative uncharacterize 100.0 3E-33 1E-37 306.5 14.2 213 65-368 48-329 (383)
111 1j1b_A Glycogen synthase kinas 100.0 3.4E-33 1.2E-37 310.2 14.6 214 65-369 95-345 (420)
112 3kvw_A DYRK2, dual specificity 100.0 3.1E-33 1.1E-37 311.3 14.2 197 75-368 157-416 (429)
113 3eqc_A Dual specificity mitoge 100.0 8.1E-34 2.8E-38 308.0 9.2 208 63-367 77-331 (360)
114 4eqm_A Protein kinase; transfe 100.0 2E-33 6.8E-38 296.6 11.4 209 63-365 57-272 (294)
115 3hko_A Calcium/calmodulin-depe 100.0 2.3E-33 7.7E-38 302.1 12.0 218 63-370 74-340 (345)
116 1blx_A Cyclin-dependent kinase 100.0 5.2E-33 1.8E-37 296.7 14.6 213 66-369 60-305 (326)
117 3byv_A Rhoptry kinase; malaria 100.0 9.1E-35 3.1E-39 317.9 0.5 203 66-368 122-367 (377)
118 4aaa_A Cyclin-dependent kinase 100.0 2.1E-33 7.1E-38 301.3 10.7 209 64-367 71-313 (331)
119 2qr7_A Ribosomal protein S6 ki 100.0 2.4E-33 8.3E-38 302.9 11.3 207 66-367 64-284 (342)
120 3lb7_A RAF proto-oncogene seri 100.0 6.1E-33 2.1E-37 294.9 13.8 208 63-363 78-296 (307)
121 3nsz_A CK II alpha, casein kin 100.0 4.3E-33 1.5E-37 298.1 12.5 208 64-368 77-327 (330)
122 3c4z_A Rhodopsin kinase; Ser/T 100.0 3.8E-33 1.3E-37 318.0 12.9 207 65-367 233-455 (543)
123 3com_A Serine/threonine-protei 100.0 1.5E-32 5E-37 291.8 16.2 212 64-369 71-287 (314)
124 3e3p_A Protein kinase, putativ 100.0 5.2E-33 1.8E-37 301.1 13.0 217 63-370 65-324 (360)
125 3a7i_A MST3 kinase, serine/thr 100.0 1E-32 3.5E-37 291.7 14.7 207 63-367 66-277 (303)
126 3an0_A Dual specificity mitoge 100.0 1.4E-33 4.8E-38 303.5 8.2 203 70-367 103-317 (340)
127 2vgo_A Serine/threonine-protei 100.0 7E-33 2.4E-37 290.2 13.0 204 64-367 61-269 (284)
128 3p86_A Serine/threonine-protei 100.0 3.8E-33 1.3E-37 296.8 11.2 202 64-360 81-291 (309)
129 3p23_A Serine/threonine-protei 100.0 4.4E-33 1.5E-37 310.3 12.0 212 64-367 64-290 (432)
130 2vwi_A Serine/threonine-protei 100.0 8.1E-33 2.8E-37 291.6 13.2 216 64-368 60-295 (303)
131 2y7j_A Phosphorylase B kinase 100.0 1.5E-32 5.2E-37 299.2 15.6 204 66-366 148-365 (365)
132 2x7f_A TRAF2 and NCK-interacti 100.0 1.3E-32 4.5E-37 293.8 14.6 213 65-368 68-294 (326)
133 2jam_A Calcium/calmodulin-depe 100.0 9.8E-33 3.4E-37 292.1 13.4 207 64-368 53-269 (304)
134 2ycf_A Serine/threonine-protei 100.0 4.3E-33 1.5E-37 297.5 10.7 208 63-367 61-281 (322)
135 2clq_A Mitogen-activated prote 100.0 9.3E-33 3.2E-37 290.2 13.0 211 64-368 66-286 (295)
136 2h6d_A 5'-AMP-activated protei 100.0 5E-33 1.7E-37 289.6 10.8 207 64-368 58-269 (276)
137 3bhy_A Death-associated protei 100.0 9.2E-33 3.2E-37 288.7 12.7 207 64-367 55-272 (283)
138 2rku_A Serine/threonine-protei 100.0 1.1E-32 3.7E-37 290.2 13.1 206 65-367 63-272 (294)
139 2owb_A Serine/threonine-protei 100.0 8.5E-33 2.9E-37 297.3 12.5 207 65-368 89-299 (335)
140 2w5a_A Serine/threonine-protei 100.0 4.7E-33 1.6E-37 290.3 10.1 213 64-369 52-276 (279)
141 3kmu_A ILK, integrin-linked ki 100.0 1.2E-32 4.2E-37 285.2 13.0 201 63-360 53-263 (271)
142 1wak_A Serine/threonine-protei 100.0 3.5E-33 1.2E-37 305.9 9.0 252 66-366 82-397 (397)
143 4euu_A Serine/threonine-protei 100.0 6E-33 2.1E-37 296.0 10.5 205 65-362 55-304 (319)
144 3q60_A ROP5B; pseudokinase, tr 100.0 2.1E-34 7.1E-39 314.3 -1.0 207 68-368 116-360 (371)
145 3kex_A Receptor tyrosine-prote 100.0 1.5E-32 5.3E-37 293.9 13.3 206 62-361 60-270 (325)
146 1z57_A Dual specificity protei 100.0 1.6E-32 5.5E-37 293.6 13.1 225 66-369 60-337 (339)
147 2pml_X PFPK7, Ser/Thr protein 100.0 2.4E-32 8.1E-37 294.5 14.3 208 65-368 91-330 (348)
148 2b9h_A MAP kinase FUS3, mitoge 100.0 1.1E-32 3.7E-37 297.8 11.6 225 63-370 55-315 (353)
149 2i6l_A Mitogen-activated prote 100.0 2.7E-32 9.1E-37 289.7 14.2 218 64-371 55-316 (320)
150 3cek_A Dual specificity protei 100.0 9.3E-33 3.2E-37 293.6 10.7 215 64-372 73-304 (313)
151 3s95_A LIMK-1, LIM domain kina 100.0 2.1E-33 7.2E-38 298.1 5.5 215 63-360 53-275 (310)
152 1vzo_A Ribosomal protein S6 ki 100.0 1.4E-32 4.8E-37 298.2 12.1 208 65-367 106-328 (355)
153 2psq_A Fibroblast growth facto 100.0 2.9E-32 1E-36 297.5 14.5 204 64-360 133-357 (370)
154 1phk_A Phosphorylase kinase; g 100.0 3.8E-32 1.3E-36 286.2 14.8 207 65-368 71-291 (298)
155 3kul_A Ephrin type-A receptor 100.0 2.7E-32 9.2E-37 292.3 13.7 205 64-360 97-306 (325)
156 4hcu_A Tyrosine-protein kinase 100.0 2.2E-32 7.7E-37 284.0 12.5 204 64-361 52-260 (269)
157 1mp8_A Focal adhesion kinase 1 100.0 1.7E-32 5.7E-37 287.0 10.8 203 63-360 62-269 (281)
158 3soc_A Activin receptor type-2 100.0 1.1E-32 3.9E-37 294.6 9.7 209 62-360 63-311 (322)
159 4f0f_A Serine/threonine-protei 100.0 8E-32 2.7E-36 282.4 15.6 198 64-360 70-282 (287)
160 3ugc_A Tyrosine-protein kinase 100.0 1.1E-32 3.7E-37 290.3 9.0 209 63-360 57-284 (295)
161 3fhr_A MAP kinase-activated pr 100.0 6E-33 2.1E-37 298.8 7.0 206 70-367 75-294 (336)
162 1rjb_A FL cytokine receptor; k 100.0 1.8E-32 6.2E-37 295.1 10.5 207 63-361 94-328 (344)
163 3l9p_A Anaplastic lymphoma kin 100.0 1.1E-32 3.6E-37 300.6 8.7 209 63-364 120-342 (367)
164 4e5w_A Tyrosine-protein kinase 100.0 2.7E-32 9.2E-37 287.9 11.3 209 63-360 69-295 (302)
165 3sxs_A Cytoplasmic tyrosine-pr 100.0 3.8E-32 1.3E-36 281.9 11.9 203 65-361 51-258 (268)
166 3lzb_A Epidermal growth factor 100.0 4.3E-32 1.5E-36 291.0 12.5 204 63-360 63-271 (327)
167 3vhe_A Vascular endothelial gr 100.0 2.5E-32 8.4E-37 295.7 10.7 208 63-361 71-349 (359)
168 3tt0_A Basic fibroblast growth 100.0 3.7E-32 1.3E-36 297.9 11.8 205 63-360 120-345 (382)
169 2wtk_C Serine/threonine-protei 100.0 1.6E-31 5.6E-36 282.3 16.3 214 64-369 53-272 (305)
170 3og7_A AKAP9-BRAF fusion prote 100.0 3E-32 1E-36 286.5 10.5 205 63-360 66-281 (289)
171 3cbl_A C-FES, proto-oncogene t 100.0 2.1E-32 7.2E-37 299.3 9.7 204 63-360 158-367 (377)
172 2vx3_A Dual specificity tyrosi 100.0 7.1E-32 2.4E-36 295.5 13.9 205 66-367 99-379 (382)
173 1fvr_A Tyrosine-protein kinase 100.0 3.6E-32 1.2E-36 291.1 11.2 202 63-360 71-293 (327)
174 3poz_A Epidermal growth factor 100.0 3.1E-32 1.1E-36 291.9 10.7 204 63-360 63-271 (327)
175 2wei_A Calmodulin-domain prote 100.0 3.2E-32 1.1E-36 285.7 10.5 207 63-367 67-283 (287)
176 2dyl_A Dual specificity mitoge 100.0 3E-32 1E-36 289.6 10.2 205 68-367 75-290 (318)
177 2qol_A Ephrin receptor; recept 100.0 3.7E-32 1.3E-36 297.1 11.2 205 64-360 93-302 (373)
178 3gen_A Tyrosine-protein kinase 100.0 5.7E-32 2E-36 282.9 12.1 202 65-360 67-273 (283)
179 3dtc_A Mitogen-activated prote 100.0 5E-32 1.7E-36 281.3 11.5 199 64-361 53-267 (271)
180 2eu9_A Dual specificity protei 100.0 7E-32 2.4E-36 290.8 12.8 223 66-367 65-340 (355)
181 3qup_A Tyrosine-protein kinase 100.0 1E-31 3.5E-36 286.6 13.9 215 63-367 71-305 (323)
182 3pls_A Macrophage-stimulating 100.0 1.3E-31 4.3E-36 282.0 14.3 209 63-360 68-280 (298)
183 3op5_A Serine/threonine-protei 100.0 2.6E-32 8.9E-37 296.9 9.4 212 66-360 97-322 (364)
184 3f66_A Hepatocyte growth facto 100.0 9.5E-32 3.3E-36 283.4 13.2 208 63-360 72-284 (298)
185 1q8y_A SR protein kinase; tran 100.0 2.7E-32 9.1E-37 296.8 8.9 210 66-368 64-341 (373)
186 4fvq_A Tyrosine-protein kinase 100.0 4.9E-32 1.7E-36 284.1 10.5 195 64-360 59-268 (289)
187 2a19_B Interferon-induced, dou 100.0 5.4E-32 1.9E-36 282.5 10.7 208 64-366 51-273 (284)
188 2izr_A Casein kinase I isoform 100.0 1.1E-31 3.7E-36 287.8 12.8 210 64-360 51-274 (330)
189 2rio_A Serine/threonine-protei 100.0 4.2E-32 1.4E-36 302.7 9.8 210 65-367 56-302 (434)
190 3c1x_A Hepatocyte growth facto 100.0 7E-32 2.4E-36 294.9 11.3 208 63-360 136-348 (373)
191 2eva_A TAK1 kinase - TAB1 chim 100.0 7.8E-32 2.7E-36 286.2 11.1 198 64-360 48-256 (307)
192 1u59_A Tyrosine-protein kinase 100.0 1.5E-31 5.2E-36 280.6 12.7 206 63-361 56-266 (287)
193 3uim_A Brassinosteroid insensi 100.0 2.7E-31 9.1E-36 283.8 14.6 208 63-363 73-307 (326)
194 1k9a_A Carboxyl-terminal SRC k 100.0 9.1E-32 3.1E-36 301.3 11.4 200 64-360 233-438 (450)
195 3aln_A Dual specificity mitoge 100.0 5.4E-32 1.8E-36 289.5 9.1 203 70-367 74-292 (327)
196 2ivs_A Proto-oncogene tyrosine 100.0 1.5E-31 5.1E-36 283.6 12.4 205 63-360 72-304 (314)
197 3cc6_A Protein tyrosine kinase 100.0 9.2E-32 3.1E-36 281.2 10.6 203 63-360 59-266 (281)
198 3q4u_A Activin receptor type-1 100.0 4.5E-32 1.5E-36 285.9 7.9 210 63-360 48-295 (301)
199 1t46_A HOMO sapiens V-KIT hard 100.0 1.3E-31 4.6E-36 283.8 11.6 205 64-360 73-300 (313)
200 1luf_A Muscle-specific tyrosin 100.0 1.3E-31 4.5E-36 287.9 11.6 205 63-360 96-328 (343)
201 3a99_A Proto-oncogene serine/t 100.0 2.2E-31 7.5E-36 284.4 13.1 206 63-370 92-303 (320)
202 2y4i_B KSR2, HKSR2, kinase sup 100.0 4.9E-31 1.7E-35 280.5 15.8 208 62-360 74-295 (319)
203 1csn_A Casein kinase-1; phosph 100.0 1E-31 3.4E-36 282.8 10.2 208 66-360 54-276 (298)
204 2h34_A Serine/threonine-protei 100.0 1.7E-31 5.7E-36 283.8 11.7 202 64-360 81-289 (309)
205 2qkw_B Protein kinase; three-h 100.0 5.8E-32 2E-36 288.7 7.5 207 63-361 81-309 (321)
206 2v62_A Serine/threonine-protei 100.0 8.1E-32 2.8E-36 290.8 8.4 211 66-360 97-321 (345)
207 2xir_A Vascular endothelial gr 100.0 1.6E-31 5.5E-36 283.6 10.5 208 63-361 76-304 (316)
208 3t9t_A Tyrosine-protein kinase 100.0 2.6E-31 8.9E-36 275.0 11.7 202 65-360 51-257 (267)
209 1mqb_A Ephrin type-A receptor 100.0 5.5E-31 1.9E-35 283.0 14.6 205 64-360 93-302 (333)
210 2ozo_A Tyrosine-protein kinase 100.0 5.8E-31 2E-35 305.7 15.4 205 63-360 382-591 (613)
211 1byg_A CSK, protein (C-termina 100.0 7.6E-32 2.6E-36 281.4 7.2 200 64-360 61-266 (278)
212 3lxl_A Tyrosine-protein kinase 100.0 1.7E-31 5.8E-36 285.8 10.0 208 64-360 71-296 (327)
213 3kfa_A Tyrosine-protein kinase 100.0 4.8E-31 1.6E-35 276.4 12.7 203 64-360 56-264 (288)
214 1p4o_A Insulin-like growth fac 100.0 3.6E-31 1.2E-35 282.1 11.8 205 64-361 75-293 (322)
215 3lxp_A Non-receptor tyrosine-p 100.0 2.4E-31 8.4E-36 283.7 9.8 206 64-360 80-303 (318)
216 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 2.5E-31 8.7E-36 297.9 10.4 206 65-365 227-440 (452)
217 2i1m_A Macrophage colony-stimu 100.0 1.9E-31 6.4E-36 285.9 8.9 205 64-360 96-319 (333)
218 2yfx_A Tyrosine-protein kinase 100.0 1.6E-31 5.6E-36 285.9 8.4 209 63-364 79-301 (327)
219 3brb_A Proto-oncogene tyrosine 100.0 9.9E-31 3.4E-35 277.7 14.0 208 64-360 83-301 (313)
220 1xbb_A Tyrosine-protein kinase 100.0 8.3E-31 2.9E-35 275.5 13.1 204 63-360 64-272 (291)
221 1u46_A ACK-1, activated CDC42 100.0 3.4E-31 1.2E-35 277.7 9.8 205 63-360 67-277 (291)
222 2wqm_A Serine/threonine-protei 100.0 7.6E-31 2.6E-35 278.2 12.6 204 63-360 78-290 (310)
223 2iwi_A Serine/threonine-protei 100.0 6.8E-31 2.3E-35 278.9 11.8 206 63-370 80-293 (312)
224 3mdy_A Bone morphogenetic prot 100.0 9.7E-31 3.3E-35 280.2 12.9 208 65-360 79-324 (337)
225 4fl3_A Tyrosine-protein kinase 100.0 4.8E-31 1.6E-35 307.4 10.7 203 64-360 417-624 (635)
226 1qcf_A Haematopoetic cell kina 100.0 5.4E-31 1.8E-35 295.4 10.7 202 64-360 230-437 (454)
227 1opk_A P150, C-ABL, proto-onco 100.0 1.1E-30 3.8E-35 296.0 13.1 202 65-360 264-471 (495)
228 3qa8_A MGC80376 protein; kinas 100.0 6.7E-31 2.3E-35 303.8 11.5 213 63-367 58-304 (676)
229 2pvf_A Fibroblast growth facto 100.0 1.3E-30 4.4E-35 279.9 12.8 205 63-360 86-311 (334)
230 4hgt_A Casein kinase I isoform 100.0 2E-30 6.7E-35 272.4 13.7 211 64-360 51-273 (296)
231 3g2f_A Bone morphogenetic prot 100.0 5.9E-31 2E-35 282.1 9.8 215 62-360 52-311 (336)
232 1qpc_A LCK kinase; alpha beta 100.0 1.1E-30 3.6E-35 272.6 11.1 202 64-360 55-262 (279)
233 2nru_A Interleukin-1 receptor- 100.0 1E-30 3.5E-35 276.6 11.0 205 63-360 76-299 (307)
234 3gxj_A TGF-beta receptor type- 100.0 6.3E-32 2.2E-36 284.8 1.6 207 66-360 46-290 (303)
235 2w1i_A JAK2; chromosomal rearr 100.0 9.5E-31 3.3E-35 280.0 10.6 209 63-360 88-315 (326)
236 3uzp_A CKI-delta, CKID, casein 100.0 3.4E-30 1.2E-34 270.8 13.0 211 64-360 51-273 (296)
237 2j0j_A Focal adhesion kinase 1 100.0 2.2E-30 7.5E-35 302.9 11.9 202 64-360 438-644 (656)
238 2buj_A Serine/threonine-protei 100.0 3.6E-30 1.2E-34 273.8 12.5 217 64-361 73-300 (317)
239 2h8h_A Proto-oncogene tyrosine 100.0 9.4E-31 3.2E-35 299.4 8.6 207 65-366 310-524 (535)
240 4eut_A Serine/threonine-protei 100.0 5.3E-31 1.8E-35 290.1 6.2 203 65-360 55-302 (396)
241 3ll6_A Cyclin G-associated kin 100.0 2.7E-30 9.3E-35 276.2 10.4 215 65-361 73-302 (337)
242 2jii_A Serine/threonine-protei 100.0 1.9E-30 6.6E-35 280.7 8.2 212 64-360 89-329 (352)
243 3dzo_A Rhoptry kinase domain; 100.0 5.1E-31 1.7E-35 292.0 1.8 175 93-367 177-370 (413)
244 1b6c_B TGF-B superfamily recep 100.0 4.8E-30 1.7E-34 275.5 9.2 207 66-360 83-329 (342)
245 3e7e_A HBUB1, BUB1A, mitotic c 100.0 5.5E-30 1.9E-34 278.6 9.3 200 66-360 113-331 (365)
246 3m2w_A MAP kinase-activated pr 100.0 3.8E-29 1.3E-33 264.2 14.1 190 66-368 59-264 (299)
247 2pzi_A Probable serine/threoni 100.0 5.6E-30 1.9E-34 301.4 6.4 198 63-365 125-325 (681)
248 3sv0_A Casein kinase I-like; t 100.0 3.1E-29 1.1E-33 282.6 12.0 211 64-360 49-271 (483)
249 2vuw_A Serine/threonine-protei 100.0 2.2E-29 7.6E-34 270.5 7.5 170 93-365 134-336 (336)
250 3uqc_A Probable conserved tran 99.9 1.3E-27 4.5E-32 251.4 5.7 173 63-360 77-258 (286)
251 4azs_A Methyltransferase WBDD; 99.9 1.4E-26 4.8E-31 266.1 5.7 189 65-364 289-479 (569)
252 3en9_A Glycoprotease, O-sialog 99.7 4.7E-19 1.6E-23 202.4 0.3 93 64-171 386-479 (540)
253 4gqb_B Methylosome protein 50; 99.6 1.6E-14 5.4E-19 155.4 13.8 125 581-714 102-237 (344)
254 3ow8_A WD repeat-containing pr 99.6 3.2E-14 1.1E-18 151.2 15.6 121 581-715 185-313 (321)
255 2ynn_A Coatomer subunit beta'; 99.5 5.1E-14 1.7E-18 148.0 15.3 103 604-715 10-120 (304)
256 1zar_A RIO2 kinase; serine kin 99.5 2.3E-15 7.9E-20 157.6 1.9 88 64-168 151-239 (282)
257 2pm7_B Protein transport prote 99.5 1.1E-13 3.9E-18 144.8 14.9 106 603-714 5-123 (297)
258 4gqb_B Methylosome protein 50; 99.5 8.3E-14 2.8E-18 149.8 14.2 125 578-715 145-281 (344)
259 2xzm_R RACK1; ribosome, transl 99.5 1.3E-13 4.4E-18 147.3 15.3 112 602-715 16-141 (343)
260 3frx_A Guanine nucleotide-bind 99.5 1.1E-13 3.6E-18 146.7 14.1 110 602-715 12-130 (319)
261 1vyh_C Platelet-activating fac 99.5 6.2E-14 2.1E-18 154.1 12.4 121 580-714 128-256 (410)
262 2ynn_A Coatomer subunit beta'; 99.5 8.8E-14 3E-18 146.2 12.7 123 579-715 32-164 (304)
263 1vyh_C Platelet-activating fac 99.5 1.3E-13 4.4E-18 151.6 14.2 105 603-716 104-216 (410)
264 3bg1_A Protein SEC13 homolog; 99.5 6.7E-14 2.3E-18 148.0 10.9 107 603-715 9-128 (316)
265 1got_B GT-beta; complex (GTP-b 99.5 4.2E-13 1.4E-17 143.3 16.6 120 581-714 163-292 (340)
266 4g56_B MGC81050 protein; prote 99.5 2.6E-13 9E-18 146.3 14.7 123 582-715 204-335 (357)
267 1got_B GT-beta; complex (GTP-b 99.5 3.4E-13 1.2E-17 144.0 15.4 123 581-717 205-337 (340)
268 2ymu_A WD-40 repeat protein; u 99.5 3E-13 1E-17 154.1 15.3 104 602-716 11-122 (577)
269 4gq1_A NUP37; propeller, trans 99.5 8.2E-14 2.8E-18 152.2 10.0 86 601-693 130-223 (393)
270 2hes_X YDR267CP; beta-propelle 99.5 4.4E-13 1.5E-17 142.6 14.7 107 603-714 103-221 (330)
271 4ery_A WD repeat-containing pr 99.4 8.4E-13 2.9E-17 138.4 16.1 104 603-715 19-130 (312)
272 3ow8_A WD repeat-containing pr 99.4 5.7E-13 1.9E-17 141.5 15.0 102 605-715 162-271 (321)
273 3fm0_A Protein CIAO1; WDR39,SG 99.4 5.2E-13 1.8E-17 143.0 14.7 113 592-715 5-128 (345)
274 1nr0_A Actin interacting prote 99.4 6.1E-13 2.1E-17 154.0 16.2 129 581-715 169-347 (611)
275 2hes_X YDR267CP; beta-propelle 99.4 7.6E-13 2.6E-17 140.8 15.6 109 605-715 56-176 (330)
276 1erj_A Transcriptional repress 99.4 9.4E-13 3.2E-17 143.6 16.6 122 581-715 144-279 (393)
277 4h5i_A Guanine nucleotide-exch 99.4 2.7E-13 9.2E-18 146.7 11.6 79 602-689 264-344 (365)
278 4e54_B DNA damage-binding prot 99.4 3.3E-13 1.1E-17 149.1 12.6 106 605-715 117-232 (435)
279 2pbi_B Guanine nucleotide-bind 99.4 1E-12 3.6E-17 141.3 16.0 123 581-717 219-351 (354)
280 4ery_A WD repeat-containing pr 99.4 1.1E-12 3.9E-17 137.4 15.4 121 581-715 44-172 (312)
281 3iz6_a 40S ribosomal protein R 99.4 1.3E-12 4.5E-17 141.8 15.3 128 580-715 178-321 (380)
282 3fm0_A Protein CIAO1; WDR39,SG 99.4 1.3E-12 4.6E-17 139.7 14.8 105 604-715 58-173 (345)
283 2pbi_B Guanine nucleotide-bind 99.4 2E-12 6.9E-17 139.1 15.4 105 603-715 150-263 (354)
284 4aow_A Guanine nucleotide-bind 99.4 3.2E-12 1.1E-16 134.5 16.6 117 590-715 26-151 (340)
285 3f3f_A Nucleoporin SEH1; struc 99.4 1.9E-12 6.6E-17 135.4 14.8 108 603-714 7-134 (351)
286 2w18_A PALB2, fancn, partner a 99.4 8.6E-13 3E-17 140.2 12.1 105 605-717 176-351 (356)
287 3iz6_a 40S ribosomal protein R 99.4 1.2E-12 4.1E-17 142.0 13.7 106 602-716 244-368 (380)
288 2aq5_A Coronin-1A; WD40 repeat 99.4 3.2E-12 1.1E-16 139.3 16.9 113 602-715 76-199 (402)
289 4h5i_A Guanine nucleotide-exch 99.4 1E-12 3.4E-17 142.3 12.3 108 603-715 215-335 (365)
290 2xzm_R RACK1; ribosome, transl 99.4 4.5E-12 1.5E-16 135.3 16.2 103 603-714 72-194 (343)
291 4aow_A Guanine nucleotide-bind 99.4 3.2E-12 1.1E-16 134.5 14.7 121 582-717 195-331 (340)
292 3frx_A Guanine nucleotide-bind 99.4 5.2E-12 1.8E-16 133.6 16.1 122 580-715 85-219 (319)
293 1erj_A Transcriptional repress 99.4 5.6E-12 1.9E-16 137.4 16.8 99 607-714 123-229 (393)
294 3zwl_B Eukaryotic translation 99.4 5.8E-12 2E-16 133.6 15.9 102 603-713 28-136 (369)
295 4g56_B MGC81050 protein; prote 99.4 2.5E-12 8.4E-17 138.6 12.3 126 579-714 158-292 (357)
296 3vu4_A KMHSV2; beta-propeller 99.4 4.2E-12 1.4E-16 136.6 13.9 103 603-714 191-327 (355)
297 1nr0_A Actin interacting prote 99.4 6.6E-12 2.3E-16 145.3 16.5 106 601-715 141-262 (611)
298 2pm7_B Protein transport prote 99.3 9.6E-12 3.3E-16 130.0 15.7 108 603-715 95-230 (297)
299 3mmy_A MRNA export factor; mRN 99.3 9.1E-12 3.1E-16 132.0 15.8 106 603-715 35-152 (368)
300 3k26_A Polycomb protein EED; W 99.3 6.7E-12 2.3E-16 133.1 14.0 125 583-715 45-184 (366)
301 3jrp_A Fusion protein of prote 99.3 4.7E-12 1.6E-16 135.0 12.7 107 603-715 7-126 (379)
302 3dm0_A Maltose-binding peripla 99.3 6.2E-12 2.1E-16 147.6 14.8 111 601-715 376-495 (694)
303 2j04_B YDR362CP, TAU91; beta p 99.3 2.3E-12 7.9E-17 146.5 9.1 107 603-717 304-422 (524)
304 3lrv_A PRE-mRNA-splicing facto 99.3 1.4E-11 4.9E-16 131.3 14.3 103 605-716 123-238 (343)
305 3vl1_A 26S proteasome regulato 99.3 1.5E-11 5E-16 133.9 14.6 100 581-694 118-218 (420)
306 2ymu_A WD-40 repeat protein; u 99.3 1.3E-11 4.5E-16 140.4 13.9 102 603-715 463-572 (577)
307 3ei3_B DNA damage-binding prot 99.3 2.8E-11 9.6E-16 130.4 15.7 112 590-715 61-186 (383)
308 2pm9_A Protein WEB1, protein t 99.3 1.5E-11 5.3E-16 133.3 13.0 128 581-715 187-329 (416)
309 2oit_A Nucleoporin 214KDA; NH2 99.3 9.2E-12 3.1E-16 138.2 11.4 109 606-714 91-214 (434)
310 2j04_A TAU60, YPL007P, hypothe 99.3 2E-11 7E-16 137.6 14.2 100 605-717 83-205 (588)
311 2oaj_A Protein SNI1; WD40 repe 99.3 2E-11 6.8E-16 147.8 14.7 100 605-714 15-120 (902)
312 3dm0_A Maltose-binding peripla 99.3 2.1E-11 7.2E-16 143.0 14.0 127 580-715 450-584 (694)
313 3dwl_C Actin-related protein 2 99.2 1.1E-11 3.9E-16 132.9 10.0 107 602-714 50-168 (377)
314 2j04_B YDR362CP, TAU91; beta p 99.2 9.8E-12 3.4E-16 141.3 9.6 105 602-714 261-377 (524)
315 3dwl_C Actin-related protein 2 99.2 1.4E-11 4.9E-16 132.2 10.2 111 606-717 145-276 (377)
316 2oaj_A Protein SNI1; WD40 repe 99.2 3.9E-11 1.3E-15 145.3 15.2 109 605-715 486-653 (902)
317 4a11_B DNA excision repair pro 99.2 5.5E-11 1.9E-15 128.0 14.7 111 603-713 39-165 (408)
318 3bg1_A Protein SEC13 homolog; 99.2 2.1E-11 7E-16 128.8 10.5 108 603-715 146-285 (316)
319 4aez_A CDC20, WD repeat-contai 99.2 9.2E-11 3.2E-15 127.8 15.8 103 603-713 213-326 (401)
320 3lrv_A PRE-mRNA-splicing facto 99.2 2.7E-11 9.2E-16 129.1 11.2 120 580-712 147-280 (343)
321 3ei3_B DNA damage-binding prot 99.2 8E-11 2.8E-15 126.8 15.1 102 605-715 161-274 (383)
322 4e54_B DNA damage-binding prot 99.2 2.1E-11 7.3E-16 134.6 10.7 101 606-715 208-319 (435)
323 1zth_A RIO1 serine protein kin 99.2 4.1E-12 1.4E-16 130.9 4.5 94 64-171 117-219 (258)
324 2aq5_A Coronin-1A; WD40 repeat 99.2 8.8E-11 3E-15 127.8 14.7 100 602-710 126-238 (402)
325 1pgu_A Actin interacting prote 99.2 8.9E-11 3E-15 134.0 15.1 121 582-715 467-606 (615)
326 3mkq_A Coatomer beta'-subunit; 99.2 8.7E-11 3E-15 139.4 15.4 103 603-714 9-119 (814)
327 1k8k_C P40, ARP2/3 complex 41 99.2 6.6E-11 2.2E-15 126.0 13.0 102 606-714 7-118 (372)
328 3vl1_A 26S proteasome regulato 99.2 5.6E-11 1.9E-15 129.3 12.1 98 608-714 98-203 (420)
329 3sfz_A APAF-1, apoptotic pepti 99.2 1.2E-10 4.1E-15 145.3 16.2 102 603-713 611-722 (1249)
330 3gre_A Serine/threonine-protei 99.2 8.3E-11 2.8E-15 129.1 12.6 105 591-702 51-164 (437)
331 3dw8_B Serine/threonine-protei 99.2 1.2E-10 4E-15 127.7 13.8 112 603-715 173-308 (447)
332 3jro_A Fusion protein of prote 99.2 7E-11 2.4E-15 140.2 12.7 107 603-715 5-124 (753)
333 4gq1_A NUP37; propeller, trans 99.2 1.7E-11 5.9E-16 133.7 6.8 108 605-715 87-210 (393)
334 3k26_A Polycomb protein EED; W 99.2 7E-11 2.4E-15 125.2 11.2 99 580-692 93-196 (366)
335 2xyi_A Probable histone-bindin 99.2 9.8E-11 3.3E-15 129.1 12.8 110 604-714 178-300 (430)
336 1yfq_A Cell cycle arrest prote 99.2 1.3E-10 4.6E-15 122.3 13.0 106 604-715 8-123 (342)
337 1gxr_A ESG1, transducin-like e 99.2 3.4E-10 1.1E-14 118.4 15.9 119 581-714 204-328 (337)
338 3jrp_A Fusion protein of prote 99.2 2.3E-10 8E-15 121.7 14.9 125 581-715 78-232 (379)
339 3mmy_A MRNA export factor; mRN 99.2 1.3E-10 4.3E-15 123.1 12.6 92 604-704 83-182 (368)
340 4gga_A P55CDC, cell division c 99.2 2.6E-10 8.9E-15 125.1 15.6 121 581-715 124-253 (420)
341 3f3f_A Nucleoporin SEH1; struc 99.2 1.7E-10 5.9E-15 120.4 13.2 112 604-715 107-329 (351)
342 1sq9_A Antiviral protein SKI8; 99.2 2.5E-10 8.7E-15 123.0 14.7 123 582-715 207-387 (397)
343 1gxr_A ESG1, transducin-like e 99.1 4.7E-10 1.6E-14 117.3 16.3 118 583-714 164-287 (337)
344 3gre_A Serine/threonine-protei 99.1 1.6E-10 5.4E-15 126.8 13.2 104 581-695 191-299 (437)
345 3sfz_A APAF-1, apoptotic pepti 99.1 2.4E-10 8.3E-15 142.5 16.4 121 581-714 636-765 (1249)
346 2xyi_A Probable histone-bindin 99.1 2.8E-10 9.5E-15 125.5 14.8 106 603-713 227-343 (430)
347 2j04_A TAU60, YPL007P, hypothe 99.1 1.8E-10 6.1E-15 129.9 13.3 103 608-717 130-249 (588)
348 3i2n_A WD repeat-containing pr 99.1 1.3E-10 4.4E-15 122.8 11.1 125 583-716 191-346 (357)
349 3dw8_B Serine/threonine-protei 99.1 3E-10 1E-14 124.5 14.0 131 581-717 197-367 (447)
350 3vu4_A KMHSV2; beta-propeller 99.1 4.5E-10 1.6E-14 120.6 15.1 126 583-715 82-263 (355)
351 1k8k_C P40, ARP2/3 complex 41 99.1 4.4E-10 1.5E-14 119.6 14.7 106 604-710 139-262 (372)
352 3mkq_A Coatomer beta'-subunit; 99.1 2.1E-10 7.2E-15 136.1 13.5 120 581-714 34-163 (814)
353 2vdu_B TRNA (guanine-N(7)-)-me 99.1 3.3E-10 1.1E-14 125.5 14.1 84 602-695 190-278 (450)
354 2oit_A Nucleoporin 214KDA; NH2 99.1 2.2E-10 7.4E-15 127.1 12.6 96 603-707 145-255 (434)
355 1r5m_A SIR4-interacting protei 99.1 5.1E-10 1.7E-14 120.9 14.8 101 604-714 244-352 (425)
356 2pm9_A Protein WEB1, protein t 99.1 9.6E-11 3.3E-15 127.0 8.9 103 605-715 260-406 (416)
357 4aez_A CDC20, WD repeat-contai 99.1 8.2E-10 2.8E-14 120.2 16.1 120 581-715 112-240 (401)
358 3i2n_A WD repeat-containing pr 99.1 1.5E-10 5.2E-15 122.2 10.0 104 605-714 16-139 (357)
359 3zwl_B Eukaryotic translation 99.1 1E-09 3.6E-14 116.0 16.2 118 584-715 199-338 (369)
360 2vdu_B TRNA (guanine-N(7)-)-me 99.1 3.5E-10 1.2E-14 125.3 12.6 127 581-715 124-263 (450)
361 1r5m_A SIR4-interacting protei 99.1 5.1E-10 1.7E-14 120.9 13.5 104 607-714 45-171 (425)
362 3v7d_B Cell division control p 99.1 7.6E-10 2.6E-14 122.4 14.1 116 580-711 288-410 (464)
363 3odt_A Protein DOA1; ubiquitin 99.1 8.6E-10 2.9E-14 114.1 13.0 96 606-713 183-286 (313)
364 4gga_A P55CDC, cell division c 99.1 1.7E-09 5.7E-14 118.6 16.1 105 603-716 272-388 (420)
365 3odt_A Protein DOA1; ubiquitin 99.1 1.3E-09 4.5E-14 112.7 14.5 108 590-713 6-123 (313)
366 4ggc_A P55CDC, cell division c 99.0 2.1E-09 7.2E-14 111.6 15.6 114 603-716 146-308 (318)
367 3v7d_B Cell division control p 99.0 1.2E-09 4.1E-14 120.8 13.9 98 605-714 119-227 (464)
368 4ggc_A P55CDC, cell division c 99.0 3.2E-09 1.1E-13 110.2 15.4 121 581-715 44-173 (318)
369 1yfq_A Cell cycle arrest prote 99.0 3.8E-10 1.3E-14 118.8 7.9 97 605-713 54-169 (342)
370 2w18_A PALB2, fancn, partner a 99.0 9.5E-10 3.2E-14 116.8 10.9 97 607-709 111-243 (356)
371 3jro_A Fusion protein of prote 99.0 1.8E-09 6E-14 128.2 14.4 125 581-715 76-230 (753)
372 4a11_B DNA excision repair pro 99.0 3.3E-09 1.1E-13 114.0 15.0 104 603-714 95-209 (408)
373 1sq9_A Antiviral protein SKI8; 99.0 2.7E-09 9.1E-14 114.9 14.2 101 605-715 184-314 (397)
374 2ovr_B FBW7, F-BOX/WD repeat p 99.0 4.1E-09 1.4E-13 116.2 15.1 116 581-714 298-429 (445)
375 1l0q_A Surface layer protein; 98.9 6.4E-09 2.2E-13 111.9 15.1 117 583-713 13-137 (391)
376 1pgu_A Actin interacting prote 98.9 6.5E-09 2.2E-13 118.5 15.7 99 581-694 182-289 (615)
377 4gyi_A RIO2 kinase; protein ki 98.9 1.8E-10 6.2E-15 124.7 1.6 90 74-170 162-264 (397)
378 1p22_A F-BOX/WD-repeat protein 98.9 8.5E-09 2.9E-13 113.4 14.9 94 605-713 131-232 (435)
379 2ovr_B FBW7, F-BOX/WD repeat p 98.9 1.1E-08 3.8E-13 112.6 14.5 106 580-703 137-250 (445)
380 1p22_A F-BOX/WD-repeat protein 98.9 1.4E-08 4.9E-13 111.6 15.0 97 603-714 252-356 (435)
381 3bws_A Protein LP49; two-domai 98.9 7.3E-09 2.5E-13 113.1 11.9 119 585-711 147-272 (433)
382 1l0q_A Surface layer protein; 98.8 3.2E-08 1.1E-12 106.4 15.6 119 581-713 53-179 (391)
383 2hqs_A Protein TOLB; TOLB, PAL 98.8 3.9E-08 1.3E-12 108.0 13.2 99 605-712 176-286 (415)
384 3bws_A Protein LP49; two-domai 98.6 2.5E-07 8.6E-12 100.8 15.1 118 582-713 191-324 (433)
385 1nir_A Nitrite reductase; hemo 98.4 1.1E-06 3.8E-11 100.1 12.7 97 585-695 162-264 (543)
386 2hqs_A Protein TOLB; TOLB, PAL 98.4 1.8E-06 6E-11 94.7 13.5 102 603-714 262-375 (415)
387 1k32_A Tricorn protease; prote 98.3 2.3E-06 8E-11 105.0 13.4 100 603-711 374-490 (1045)
388 3tm0_A Aminoglycoside 3'-phosp 98.3 3.8E-07 1.3E-11 93.2 5.0 95 64-168 56-211 (263)
389 1ri6_A Putative isomerase YBHE 98.2 2.9E-06 9.8E-11 88.5 10.1 102 591-705 27-141 (343)
390 2ecf_A Dipeptidyl peptidase IV 98.2 3.6E-06 1.2E-10 98.8 11.3 107 607-715 36-174 (741)
391 2ojh_A Uncharacterized protein 98.2 2.8E-06 9.4E-11 86.1 8.9 103 603-713 168-292 (297)
392 2ojh_A Uncharacterized protein 98.2 7.8E-06 2.7E-10 82.7 12.3 98 608-713 129-237 (297)
393 1pby_B Quinohemoprotein amine 98.2 5.4E-06 1.8E-10 86.2 11.3 78 607-695 240-317 (337)
394 1z68_A Fibroblast activation p 98.2 1.1E-06 3.7E-11 103.0 6.2 95 609-713 61-189 (719)
395 3o4h_A Acylamino-acid-releasin 98.2 2.2E-06 7.5E-11 97.9 7.9 94 603-709 190-298 (582)
396 3dxp_A Putative acyl-COA dehyd 98.1 2.2E-06 7.4E-11 92.1 6.9 102 64-169 83-247 (359)
397 1ri6_A Putative isomerase YBHE 98.1 1.3E-05 4.3E-10 83.6 12.3 103 591-705 73-190 (343)
398 1nir_A Nitrite reductase; hemo 98.1 6.9E-06 2.4E-10 93.5 11.0 85 615-708 145-241 (543)
399 3hfq_A Uncharacterized protein 98.1 3.1E-05 1.1E-09 81.6 14.9 97 607-709 85-204 (347)
400 3o4h_A Acylamino-acid-releasin 98.1 3.5E-06 1.2E-10 96.1 7.6 94 611-713 153-266 (582)
401 1xfd_A DIP, dipeptidyl aminope 98.1 1.7E-06 5.9E-11 101.1 5.0 98 609-716 18-137 (723)
402 1xfd_A DIP, dipeptidyl aminope 98.1 4.7E-06 1.6E-10 97.4 8.5 97 609-713 62-193 (723)
403 3u4y_A Uncharacterized protein 98.1 3.4E-05 1.2E-09 80.4 13.9 110 587-705 113-233 (331)
404 1z68_A Fibroblast activation p 98.0 2E-06 7E-11 100.6 4.7 96 611-716 19-133 (719)
405 2z3z_A Dipeptidyl aminopeptida 98.0 4.9E-06 1.7E-10 97.1 8.0 106 606-713 119-278 (706)
406 2ecf_A Dipeptidyl peptidase IV 98.0 7.8E-06 2.7E-10 95.9 9.6 98 608-714 109-230 (741)
407 1jmx_B Amine dehydrogenase; ox 98.0 1.5E-05 5.3E-10 83.3 10.6 78 607-695 254-332 (349)
408 1pby_B Quinohemoprotein amine 98.0 1.5E-05 5E-10 82.9 10.2 105 588-705 17-147 (337)
409 3u4y_A Uncharacterized protein 98.0 3.5E-05 1.2E-09 80.3 13.2 110 586-709 24-145 (331)
410 3vgz_A Uncharacterized protein 98.0 3.6E-05 1.2E-09 80.7 13.3 106 590-705 214-326 (353)
411 2bkl_A Prolyl endopeptidase; m 97.9 1.6E-05 5.6E-10 93.0 9.3 100 605-712 118-246 (695)
412 3vgz_A Uncharacterized protein 97.9 0.0001 3.5E-09 77.1 14.3 103 590-705 172-284 (353)
413 1xip_A Nucleoporin NUP159; bet 97.9 9.9E-05 3.4E-09 80.0 13.6 90 607-710 88-180 (388)
414 4a5s_A Dipeptidyl peptidase 4 97.9 2E-05 6.9E-10 92.9 8.5 120 585-714 39-192 (740)
415 1jmx_B Amine dehydrogenase; ox 97.8 4.2E-05 1.4E-09 79.9 9.9 90 612-709 4-108 (349)
416 2z3z_A Dipeptidyl aminopeptida 97.8 2.3E-05 8E-10 91.3 8.5 94 608-713 82-201 (706)
417 1nd4_A Aminoglycoside 3'-phosp 97.8 6.5E-06 2.2E-10 83.3 3.1 91 65-168 61-212 (264)
418 1k32_A Tricorn protease; prote 97.8 4.8E-05 1.6E-09 93.3 11.3 100 603-712 332-440 (1045)
419 3scy_A Hypothetical bacterial 97.8 0.00013 4.4E-09 77.3 13.2 100 607-707 154-273 (361)
420 3hfq_A Uncharacterized protein 97.8 0.00018 6.2E-09 75.6 14.1 81 608-694 240-325 (347)
421 3scy_A Hypothetical bacterial 97.8 9.6E-05 3.3E-09 78.3 12.0 91 606-701 257-360 (361)
422 2xdw_A Prolyl endopeptidase; a 97.8 5.5E-05 1.9E-09 88.6 10.8 96 607-711 124-251 (710)
423 4a5s_A Dipeptidyl peptidase 4 97.7 3.5E-05 1.2E-09 90.8 7.8 92 609-711 18-130 (740)
424 3azo_A Aminopeptidase; POP fam 97.7 7.8E-05 2.7E-09 86.1 10.2 98 606-712 128-261 (662)
425 2gop_A Trilobed protease; beta 97.6 0.00034 1.2E-08 73.3 11.8 92 608-710 59-187 (347)
426 2oiz_A Aromatic amine dehydrog 97.5 0.00049 1.7E-08 73.6 12.0 81 613-704 259-359 (361)
427 3fvz_A Peptidyl-glycine alpha- 97.5 0.0015 5.2E-08 68.5 15.0 97 605-710 140-258 (329)
428 1jof_A Carboxy-CIS,CIS-muconat 97.4 0.0011 3.7E-08 70.7 13.9 79 606-691 143-229 (365)
429 3pe7_A Oligogalacturonate lyas 97.4 0.00023 8E-09 75.8 8.3 73 612-693 40-116 (388)
430 1q7f_A NHL, brain tumor CG1071 97.3 0.0026 8.8E-08 64.7 14.6 93 607-710 163-268 (286)
431 2dg1_A DRP35, lactonase; beta 97.3 0.0021 7.1E-08 67.0 13.8 97 606-711 43-153 (333)
432 1yr2_A Prolyl oligopeptidase; 97.3 0.00042 1.4E-08 81.6 8.9 94 608-711 163-286 (741)
433 3sg8_A APH(2'')-ID; antibiotic 97.2 0.00016 5.3E-09 75.6 4.1 103 63-169 56-222 (304)
434 1jof_A Carboxy-CIS,CIS-muconat 97.2 0.00032 1.1E-08 74.8 6.3 92 608-706 40-158 (365)
435 1qks_A Cytochrome CD1 nitrite 97.2 0.0022 7.6E-08 73.1 13.2 93 589-696 184-283 (567)
436 1q7f_A NHL, brain tumor CG1071 97.1 0.0058 2E-07 62.1 14.5 102 601-712 23-140 (286)
437 3pe7_A Oligogalacturonate lyas 97.1 0.0015 5.3E-08 69.3 10.4 97 606-710 79-206 (388)
438 3fvz_A Peptidyl-glycine alpha- 97.1 0.006 2.1E-07 63.9 14.5 97 607-713 195-312 (329)
439 2yle_A Protein spire homolog 1 97.1 0.0018 6.2E-08 63.7 9.4 59 104-162 32-91 (229)
440 3c5m_A Oligogalacturonate lyas 97.0 0.00068 2.3E-08 72.0 6.9 79 606-693 34-116 (396)
441 3azo_A Aminopeptidase; POP fam 97.0 0.0013 4.4E-08 75.8 9.8 83 605-693 185-279 (662)
442 3r70_A Aminoglycoside phosphot 97.0 0.00053 1.8E-08 72.2 5.8 94 64-168 74-235 (320)
443 3e5z_A Putative gluconolactona 97.0 0.0035 1.2E-07 64.2 11.3 93 607-709 27-131 (296)
444 2oiz_A Aromatic amine dehydrog 96.9 0.0015 5E-08 69.9 8.0 89 590-694 39-146 (361)
445 3tdw_A Gentamicin resistance p 96.9 0.0014 4.9E-08 68.4 7.6 100 63-168 55-222 (306)
446 1xip_A Nucleoporin NUP159; bet 96.9 0.0046 1.6E-07 66.9 11.5 69 607-691 126-194 (388)
447 3c5m_A Oligogalacturonate lyas 96.8 0.0035 1.2E-07 66.4 9.9 72 609-691 239-332 (396)
448 3iuj_A Prolyl endopeptidase; h 96.6 0.0053 1.8E-07 71.6 10.0 91 607-707 128-248 (693)
449 3dsm_A Uncharacterized protein 96.4 0.014 4.7E-07 61.2 11.2 110 586-711 68-190 (328)
450 3e5z_A Putative gluconolactona 96.4 0.014 4.7E-07 59.7 10.7 89 607-703 171-267 (296)
451 3sjl_D Methylamine dehydrogena 96.2 0.0095 3.2E-07 64.3 8.8 92 588-695 65-176 (386)
452 1rwi_B Serine/threonine-protei 96.1 0.037 1.3E-06 55.2 12.0 98 608-713 150-254 (270)
453 3g4e_A Regucalcin; six bladed 96.0 0.033 1.1E-06 57.2 11.5 90 608-701 149-249 (297)
454 3no2_A Uncharacterized protein 95.8 0.027 9.2E-07 57.6 9.6 78 608-695 125-202 (276)
455 3no2_A Uncharacterized protein 95.8 0.036 1.2E-06 56.7 10.4 81 617-709 3-93 (276)
456 2dg1_A DRP35, lactonase; beta 95.8 0.097 3.3E-06 54.0 13.8 92 607-705 86-194 (333)
457 2mad_H Methylamine dehydrogena 95.7 0.041 1.4E-06 59.0 10.9 86 610-703 269-365 (373)
458 3ovc_A Hygromycin-B 4-O-kinase 95.7 0.0047 1.6E-07 66.2 3.3 28 141-168 214-241 (362)
459 4gkh_A Aminoglycoside 3'-phosp 95.7 0.012 3.9E-07 59.8 6.1 94 66-168 68-221 (272)
460 3ats_A Putative uncharacterize 95.5 0.0079 2.7E-07 63.8 4.2 30 140-169 222-251 (357)
461 2bkl_A Prolyl endopeptidase; m 95.4 0.032 1.1E-06 64.8 9.4 76 611-691 171-264 (695)
462 1rwi_B Serine/threonine-protei 95.4 0.075 2.6E-06 52.9 10.9 96 608-711 108-210 (270)
463 2gop_A Trilobed protease; beta 95.4 0.042 1.4E-06 57.0 9.3 70 606-690 261-332 (347)
464 1pjx_A Dfpase, DIISOPROPYLFLUO 95.2 0.088 3E-06 53.6 10.9 99 608-711 18-135 (314)
465 1mda_H Methylamine dehydrogena 95.2 0.042 1.4E-06 58.9 8.7 75 613-695 269-353 (368)
466 2mad_H Methylamine dehydrogena 95.2 0.1 3.4E-06 55.9 11.7 90 588-694 53-162 (373)
467 1qks_A Cytochrome CD1 nitrite 95.0 0.094 3.2E-06 59.6 11.3 78 615-701 163-248 (567)
468 1pjx_A Dfpase, DIISOPROPYLFLUO 95.0 0.11 3.9E-06 52.7 10.9 74 608-689 226-300 (314)
469 3hrp_A Uncharacterized protein 95.0 0.22 7.4E-06 54.0 13.6 91 608-708 131-235 (409)
470 3dsm_A Uncharacterized protein 94.8 0.12 4E-06 54.0 10.8 79 607-695 43-121 (328)
471 2iwa_A Glutamine cyclotransfer 94.5 0.31 1.1E-05 49.5 12.5 92 590-695 7-102 (266)
472 2z2n_A Virginiamycin B lyase; 94.4 0.75 2.6E-05 45.9 15.2 95 606-710 13-116 (299)
473 2xdw_A Prolyl endopeptidase; a 94.3 0.25 8.4E-06 57.4 12.9 83 606-690 231-322 (710)
474 2qe8_A Uncharacterized protein 94.3 0.18 6.3E-06 52.7 10.8 87 605-693 64-159 (343)
475 2z2n_A Virginiamycin B lyase; 94.3 0.8 2.7E-05 45.6 15.2 94 607-710 56-158 (299)
476 2q83_A YTAA protein; 2635576, 94.0 0.062 2.1E-06 56.1 6.2 29 140-168 222-250 (346)
477 2ghs_A AGR_C_1268P; regucalcin 93.9 0.62 2.1E-05 48.3 13.8 92 608-703 179-282 (326)
478 3g4e_A Regucalcin; six bladed 93.7 0.81 2.8E-05 46.5 14.0 92 607-710 12-115 (297)
479 2ghs_A AGR_C_1268P; regucalcin 93.6 0.52 1.8E-05 48.8 12.7 90 608-709 49-150 (326)
480 3c75_H MADH, methylamine dehyd 93.6 0.11 3.9E-06 56.6 7.6 84 612-703 323-417 (426)
481 3c75_H MADH, methylamine dehyd 93.1 0.18 6E-06 55.1 8.0 93 588-696 105-217 (426)
482 2qe8_A Uncharacterized protein 92.9 0.46 1.6E-05 49.6 11.0 100 609-710 196-308 (343)
483 1kb0_A Quinohemoprotein alcoho 92.9 0.16 5.3E-06 59.1 7.9 59 629-696 457-515 (677)
484 3nol_A Glutamine cyclotransfer 92.9 0.65 2.2E-05 46.9 11.4 91 590-695 29-123 (262)
485 3dr2_A Exported gluconolactona 92.8 0.84 2.9E-05 46.5 12.6 92 607-709 44-147 (305)
486 2hz6_A Endoplasmic reticulum t 92.8 0.073 2.5E-06 56.8 4.4 67 618-694 8-74 (369)
487 2qc5_A Streptogramin B lactona 92.5 1.9 6.4E-05 42.9 14.5 94 607-710 19-121 (300)
488 1mda_H Methylamine dehydrogena 92.0 0.19 6.3E-06 53.8 6.4 85 588-688 52-158 (368)
489 3sjl_D Methylamine dehydrogena 91.9 0.37 1.3E-05 51.8 8.6 76 612-695 284-370 (386)
490 3nok_A Glutaminyl cyclase; bet 91.2 1.5 5.3E-05 44.3 11.8 91 591-695 42-132 (268)
491 2xe4_A Oligopeptidase B; hydro 91.1 0.47 1.6E-05 55.6 9.1 90 609-708 175-286 (751)
492 3mbr_X Glutamine cyclotransfer 90.9 4.3 0.00015 40.5 14.7 90 591-695 8-101 (243)
493 2qc5_A Streptogramin B lactona 90.9 3.3 0.00011 40.9 14.3 94 607-710 61-163 (300)
494 1yiq_A Quinohemoprotein alcoho 90.9 0.27 9.4E-06 57.1 6.8 58 628-694 454-511 (689)
495 1yr2_A Prolyl oligopeptidase; 90.8 0.31 1.1E-05 56.9 7.3 73 611-689 212-304 (741)
496 3hrp_A Uncharacterized protein 90.7 1.1 3.7E-05 48.3 11.0 92 613-711 176-286 (409)
497 2pyw_A Uncharacterized protein 90.6 0.15 5.1E-06 55.4 3.9 30 138-168 230-259 (420)
498 3dr2_A Exported gluconolactona 90.1 1.3 4.3E-05 45.2 10.4 73 608-690 131-226 (305)
499 1fwx_A Nitrous oxide reductase 89.4 0.59 2E-05 52.8 7.6 79 609-688 278-361 (595)
500 2p4o_A Hypothetical protein; p 89.0 3.9 0.00013 41.5 13.3 88 589-692 19-108 (306)
No 1
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=2.8e-45 Score=385.79 Aligned_cols=210 Identities=15% Similarity=0.160 Sum_probs=172.0
Q ss_pred eeeehhhhcccCCCCCceecccceeec-CCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004987 63 RKHSDGVELTHGDHLRNQGGLSGVCEN-EAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~-~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~ 140 (720)
+..+|..+|++++|||||++|+ ++++ ......+|+|||| .||+|.++|.+.+ .+++.+++.|+.||+.||+|||++
T Consensus 71 ~~~~E~~il~~l~HpnIV~~~~-~~~~~~~~~~~~~lvmEy~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~ylH~~ 148 (290)
T 3fpq_A 71 RFKEEAEMLKGLQHPNIVRFYD-SWESTVKGKKCIVLVTELMTSGTLKTYLKRFK-VMKIKVLRSWCRQILKGLQFLHTR 148 (290)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEE-EEEEEETTEEEEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHhCCCCCCCcEEE-EEeeccCCCcEEEEEEeCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC
Confidence 4457888999999999999999 5543 2333468999999 8999999996543 499999999999999999999999
Q ss_pred C--ceeccCCCCcEEEc-cCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCC
Q 004987 141 G--IVVHNVRPSCFVMS-SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 141 g--IvHrDLKP~NILl~-~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~ 217 (720)
| ||||||||+||||+ .+|.+||+|||+|+.....
T Consensus 149 ~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~~------------------------------------------- 185 (290)
T 3fpq_A 149 TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS------------------------------------------- 185 (290)
T ss_dssp SSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCTT-------------------------------------------
T ss_pred CCCEEecccChhheeEECCCCCEEEEeCcCCEeCCCC-------------------------------------------
Confidence 9 99999999999998 4789999888776321000
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhh
Q 004987 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRL 297 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSL 297 (720)
.....+||+.|||||++.+ .|+.++|||||
T Consensus 186 -------------------------------------------------~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSl 215 (290)
T 3fpq_A 186 -------------------------------------------------FAKAVIGTPEFMAPEMYEE-KYDESVDVYAF 215 (290)
T ss_dssp -------------------------------------------------SBEESCSSCCCCCGGGGGT-CCCTHHHHHHH
T ss_pred -------------------------------------------------ccCCcccCccccCHHHcCC-CCCcHHHHHHH
Confidence 0012579999999999976 49999999999
Q ss_pred hhhhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004987 298 GVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 298 GvlL~eLlt---pf~~~~~~~~~~~~i~~~~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
||+||||+| ||.........+..+..+..|+.+....+ ...+||.+||++||++|||+.|+|+||||++.
T Consensus 216 Gvilyelltg~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~Hp~~~~~ 289 (290)
T 3fpq_A 216 GMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQEE 289 (290)
T ss_dssp HHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC--
T ss_pred HHHHHHHHHCCCCCCCCCcHHHHHHHHHcCCCCCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcCccccCC
Confidence 999999999 77666666667777777777776665554 45599999999999999999999999999863
No 2
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=1.3e-45 Score=390.86 Aligned_cols=227 Identities=25% Similarity=0.394 Sum_probs=175.6
Q ss_pred eeeehhhhcccCCCCCceecccceeecCC--------CCCcEEEEEec-CCCCHHHHHhCCCC--CCCHHHHHHHHHHHH
Q 004987 63 RKHSDGVELTHGDHLRNQGGLSGVCENEA--------AIDPFVHAIEW-GDVSLRQWLDKPKR--SVDVYECLHIFRQIV 131 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~--------~~~~~~lV~E~-~g~sL~~~L~~~~~--~l~~~~~~~i~~QIl 131 (720)
+..+|..+|++++|||||++|+.+..... ...++|+|||| .|++|.+++..... ..++..++.|+.||+
T Consensus 49 ~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~ 128 (299)
T 4g31_A 49 KVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIA 128 (299)
T ss_dssp HHHHHHHHHTTCCCTTBCCEEEEEEEEC----------CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHH
Confidence 34578899999999999999994443332 12247999999 89999999965432 245677999999999
Q ss_pred HHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccc
Q 004987 132 EIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQ 211 (720)
Q Consensus 132 ~aL~~LHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfg 211 (720)
.||+|||++|||||||||+|||++.+|.+||+|||+++.......... ..
T Consensus 129 ~al~ylH~~~IiHRDlKp~NILl~~~~~vKl~DFGla~~~~~~~~~~~-----------------------------~~- 178 (299)
T 4g31_A 129 EAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQT-----------------------------VL- 178 (299)
T ss_dssp HHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCCCC-------------------------------------------
T ss_pred HHHHHHHHCcCccccCcHHHeEECCCCcEEEccCccceecCCCccccc-----------------------------cc-
Confidence 999999999999999999999999999999999998865432211000 00
Q ss_pred cccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCcc
Q 004987 212 LVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCA 291 (720)
Q Consensus 212 la~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~ 291 (720)
. ........+..+||+.|||||++.+..|+.+
T Consensus 179 -~-----------------------------------------------~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~ 210 (299)
T 4g31_A 179 -T-----------------------------------------------PMPAYARHTGQVGTKLYMSPEQIHGNSYSHK 210 (299)
T ss_dssp -------------------------------------------------------------CCCTTSCHHHHTTCCCCTH
T ss_pred -c-----------------------------------------------ccccccccCCcccCccccCHHHHcCCCCCCH
Confidence 0 0000001123589999999999999999999
Q ss_pred ccchhhhhhhhhccccCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004987 292 SDIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 292 sDIwSLGvlL~eLltpf~~~~~~~~~~~~i~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
+|||||||+||||++||....+....+..+....+|+.+....|...+||.+||++||.+|||+.|+|+||||++.
T Consensus 211 ~DiwSlGvilyell~Pf~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~ 286 (299)
T 4g31_A 211 VDIFSLGLILFELLYPFSTQMERVRTLTDVRNLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIENAVFEDL 286 (299)
T ss_dssp HHHHHHHHHHHHHHSCCSSHHHHHHHHHHHHTTCCCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGCCC
T ss_pred HHHHHHHHHHHHHccCCCCccHHHHHHHHHhcCCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhCCC
Confidence 9999999999999999987666666777777788888777778888899999999999999999999999999876
No 3
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=9.2e-45 Score=389.82 Aligned_cols=241 Identities=15% Similarity=0.263 Sum_probs=185.2
Q ss_pred CCcccccccccC-------CCCCCccccccccccCCCCccceeeeehhhhcccCCCCCceecccceeecCCCCCcEEEEE
Q 004987 28 SSRALNISGVSD-------RNPRLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAI 100 (720)
Q Consensus 28 ~~~~~~~~~~~~-------~~~~~~~~~~~~~~g~~~~~~~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~ 100 (720)
..+.+|.|+++. .+.+.++++.+...... . .-+..+|..+|++++|||||++|+ +++++. .+||||
T Consensus 78 ~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~-~--~~~~~~Ei~il~~l~HpnIV~l~~-~~~~~~---~~~ivm 150 (346)
T 4fih_A 78 NFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ-R--RELLFNEVVIMRDYQHENVVEMYN-SYLVGD---ELWVVM 150 (346)
T ss_dssp EEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCS-S--GGGGHHHHHHHHHCCCTTBCCEEE-EEEETT---EEEEEE
T ss_pred EeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchh-H--HHHHHHHHHHHHhCCCCCCCcEEE-EEEECC---EEEEEE
Confidence 345567777765 23344555555443322 1 123347888999999999999999 665554 679999
Q ss_pred ec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccc
Q 004987 101 EW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEG 179 (720)
Q Consensus 101 E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~ 179 (720)
|| .||+|.+++.+. .+++.+++.|+.||+.||+|||++|||||||||+||||+.+|++||+|||+++......
T Consensus 151 Ey~~gg~L~~~l~~~--~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~---- 224 (346)
T 4fih_A 151 EFLEGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV---- 224 (346)
T ss_dssp CCCTTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSS----
T ss_pred eCCCCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEECCCCCEEEecCcCceecCCCC----
Confidence 99 899999999653 49999999999999999999999999999999999999999999998888874321110
Q ss_pred cccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhc
Q 004987 180 LNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEE 259 (720)
Q Consensus 180 ~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~ 259 (720)
+
T Consensus 225 -----------------------------~-------------------------------------------------- 225 (346)
T 4fih_A 225 -----------------------------P-------------------------------------------------- 225 (346)
T ss_dssp -----------------------------C--------------------------------------------------
T ss_pred -----------------------------C--------------------------------------------------
Confidence 0
Q ss_pred ccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhccc---cCCCCchHHHHHHHhhcCCCC--ccccccC
Q 004987 260 KKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLP--PQLLLKF 334 (720)
Q Consensus 260 ~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGvlL~eLlt---pf~~~~~~~~~~~~i~~~~~p--~~~~~~~ 334 (720)
.....+||++|||||++.+..|+.++|||||||+||||++ ||...... ..+..+.....+ +.+....
T Consensus 226 -------~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~-~~~~~i~~~~~~~~~~~~~~s 297 (346)
T 4fih_A 226 -------RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL-KAMKMIRDNLPPRLKNLHKVS 297 (346)
T ss_dssp -------CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-HHHHHHHHSSCCCCSCGGGSC
T ss_pred -------cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH-HHHHHHHcCCCCCCCccccCC
Confidence 0012589999999999999999999999999999999999 67665443 445555544322 1222334
Q ss_pred chHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004987 335 PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 335 p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
+...+||.+||.+||++|||+.|+|+||||+...
T Consensus 298 ~~~~dli~~~L~~dP~~R~ta~e~l~Hp~~~~~~ 331 (346)
T 4fih_A 298 PSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAG 331 (346)
T ss_dssp HHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCC
T ss_pred HHHHHHHHHHcCCChhHCcCHHHHhcCHhhcCCC
Confidence 5556999999999999999999999999998764
No 4
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=2e-45 Score=395.58 Aligned_cols=246 Identities=17% Similarity=0.204 Sum_probs=184.6
Q ss_pred ccCCcccccccccC-------CCCCCccccccccccCCCCccceeeeehhhhcccCCCCCceecccceeecCCCCCcEEE
Q 004987 26 SDSSRALNISGVSD-------RNPRLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVH 98 (720)
Q Consensus 26 ~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~g~~~~~~~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~l 98 (720)
....+.+|.|+++. .+.+.++++.+..... .....-+..+|+.+|++++|||||++++ +++++. .+|+
T Consensus 26 Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~-~~~~~~~~~~E~~il~~l~HpnIV~~~~-~~~~~~---~~yi 100 (350)
T 4b9d_A 26 YVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRM-SSKEREESRREVAVLANMKHPNIVQYRE-SFEENG---SLYI 100 (350)
T ss_dssp EEEEEEC------CEEEEEETTTCCEEEEEEEECTTS-CHHHHHHHHHHHHHHHHCCCTTBCCEEE-EEEETT---EEEE
T ss_pred eEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHC-CHHHHHHHHHHHHHHHHCCCCCCCcEEE-EEEECC---EEEE
Confidence 44456677777766 2333444444333221 1222234458899999999999999999 565543 6899
Q ss_pred EEec-CCCCHHHHHh-CCCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCc
Q 004987 99 AIEW-GDVSLRQWLD-KPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSH 176 (720)
Q Consensus 99 V~E~-~g~sL~~~L~-~~~~~l~~~~~~~i~~QIl~aL~~LHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~ 176 (720)
|||| .||+|.++|. +.+..+++.+++.|+.||+.||+|||++|||||||||+||||+.+|.+||+|||+++......
T Consensus 101 VmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~- 179 (350)
T 4b9d_A 101 VMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTV- 179 (350)
T ss_dssp EEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHH-
T ss_pred EEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCCEEEcccccceeecCCc-
Confidence 9999 8999999994 344558999999999999999999999999999999999999999999998888874321000
Q ss_pred ccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhh
Q 004987 177 EEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQ 256 (720)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~ 256 (720)
+
T Consensus 180 --------------------------------~----------------------------------------------- 180 (350)
T 4b9d_A 180 --------------------------------E----------------------------------------------- 180 (350)
T ss_dssp --------------------------------H-----------------------------------------------
T ss_pred --------------------------------c-----------------------------------------------
Confidence 0
Q ss_pred hhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCcccccc
Q 004987 257 VEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLK 333 (720)
Q Consensus 257 ~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGvlL~eLlt---pf~~~~~~~~~~~~i~~~~~p~~~~~~ 333 (720)
.....+||+.|||||++.+..|+.++|||||||+||||++ ||...... ..+..+..+.+|+.....
T Consensus 181 ----------~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~-~~~~~i~~~~~~~~~~~~ 249 (350)
T 4b9d_A 181 ----------LARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMK-NLVLKIISGSFPPVSLHY 249 (350)
T ss_dssp ----------HHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHTCCCCCCTTS
T ss_pred ----------cccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH-HHHHHHHcCCCCCCCccC
Confidence 0012579999999999999999999999999999999999 77765554 455555555555544444
Q ss_pred CchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004987 334 FPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 334 ~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
.+...+||.+||++||++|||+.|+|+||||+..
T Consensus 250 s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~~ 283 (350)
T 4b9d_A 250 SYDLRSLVSQLFKRNPRDRPSVNSILEKGFIAKR 283 (350)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHTT
T ss_pred CHHHHHHHHHHccCChhHCcCHHHHhcCHHhhcC
Confidence 4555699999999999999999999999999865
No 5
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=5.1e-45 Score=380.71 Aligned_cols=243 Identities=16% Similarity=0.224 Sum_probs=174.4
Q ss_pred ccCCcccccccccC-------CCCCCccccccccccCCCCccceeeeehhhhcccCCCCCceecccceeecCCCCCcEEE
Q 004987 26 SDSSRALNISGVSD-------RNPRLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVH 98 (720)
Q Consensus 26 ~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~g~~~~~~~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~l 98 (720)
....+.+|.|+++. .+.+..+++.+............+..+|..+|++++|||||++++ ++++.. .+|+
T Consensus 15 Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~-~~~~~~---~~~i 90 (275)
T 3hyh_A 15 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD-VIKSKD---EIIM 90 (275)
T ss_dssp CEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEE-EEECSS---EEEE
T ss_pred eEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEE-EEEECC---EEEE
Confidence 33445666666665 222333333332222222222334558888999999999999999 666554 6799
Q ss_pred EEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCccc
Q 004987 99 AIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEE 178 (720)
Q Consensus 99 V~E~~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~ 178 (720)
||||.+|+|.++|.+.+ .+++.+++.+++||+.||+|||++||+||||||+|||++.++++||+|||+++......
T Consensus 91 vmEy~~g~L~~~l~~~~-~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~--- 166 (275)
T 3hyh_A 91 VIEYAGNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN--- 166 (275)
T ss_dssp EEECCCEEHHHHHHHSC-SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTCCEEECCSSCC----------
T ss_pred EEeCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEECCCCCEEEeecCCCeecCCCC---
Confidence 99998889999996554 49999999999999999999999999999999999999999999998888874321100
Q ss_pred ccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhh
Q 004987 179 GLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVE 258 (720)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~ 258 (720)
T Consensus 167 -------------------------------------------------------------------------------- 166 (275)
T 3hyh_A 167 -------------------------------------------------------------------------------- 166 (275)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccCCCCccccccccCCcccCCccccCCCC-Cccccchhhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCccccc-c
Q 004987 259 EKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL-K 333 (720)
Q Consensus 259 ~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~-s~~sDIwSLGvlL~eLlt---pf~~~~~~~~~~~~i~~~~~p~~~~~-~ 333 (720)
.....+||+.|||||++.+..| ++++|||||||++|||++ ||...... ..+..+..+.++ ++. .
T Consensus 167 --------~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~-~~~~~i~~~~~~--~p~~~ 235 (275)
T 3hyh_A 167 --------FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP-VLFKNISNGVYT--LPKFL 235 (275)
T ss_dssp ----------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHTCCC--CCTTS
T ss_pred --------ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHH-HHHHHHHcCCCC--CCCCC
Confidence 0011479999999999998886 689999999999999999 77665443 455555554332 222 3
Q ss_pred CchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004987 334 FPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 334 ~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
.+...+||.+||++||++|||++|+|+||||+..
T Consensus 236 s~~~~~li~~~L~~dP~~R~s~~eil~hpw~k~~ 269 (275)
T 3hyh_A 236 SPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKVD 269 (275)
T ss_dssp CHHHHHHHHHHSCSSGGGSCCHHHHHHCHHHHTT
T ss_pred CHHHHHHHHHHccCChhHCcCHHHHHcCcccccC
Confidence 3455699999999999999999999999999754
No 6
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=7.6e-45 Score=384.88 Aligned_cols=247 Identities=17% Similarity=0.194 Sum_probs=185.0
Q ss_pred ccCCcccccccccC-------CCCCCccccccccccCCCCccceeeeehhhhcccCCCCCceecccceeecCCCCCcEEE
Q 004987 26 SDSSRALNISGVSD-------RNPRLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVH 98 (720)
Q Consensus 26 ~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~g~~~~~~~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~l 98 (720)
....+.+|.|+++. .+.+..+.+.+...........-+..+|..+|++++|||||++++ +++++. .+|+
T Consensus 34 y~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~-~~~~~~---~~yi 109 (311)
T 4aw0_A 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF-TFQDDE---KLYF 109 (311)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEE-EEECSS---EEEE
T ss_pred cEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEE-EEEeCC---EEEE
Confidence 34456677777776 223333333332211111122224457888999999999999999 666654 6799
Q ss_pred EEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcc
Q 004987 99 AIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHE 177 (720)
Q Consensus 99 V~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~ 177 (720)
|||| .||+|.++|.+.+ .+++.+++.|+.||+.||+|||++|||||||||+||||+.+|++||+|||+++........
T Consensus 110 vmEy~~gG~L~~~i~~~~-~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~ 188 (311)
T 4aw0_A 110 GLSYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 188 (311)
T ss_dssp EECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTC
T ss_pred EEecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCc
Confidence 9999 8999999996544 4999999999999999999999999999999999999999999999888887443211000
Q ss_pred cccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhh
Q 004987 178 EGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQV 257 (720)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~ 257 (720)
T Consensus 189 -------------------------------------------------------------------------------- 188 (311)
T 4aw0_A 189 -------------------------------------------------------------------------------- 188 (311)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCccccccC
Q 004987 258 EEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF 334 (720)
Q Consensus 258 ~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGvlL~eLlt---pf~~~~~~~~~~~~i~~~~~p~~~~~~~ 334 (720)
......+||+.|||||++.+..|+.++|||||||+||||++ ||...+.. ..+..+.+..+.. ....+
T Consensus 189 --------~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~-~~~~~i~~~~~~~-p~~~s 258 (311)
T 4aw0_A 189 --------ARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEG-LIFAKIIKLEYDF-PEKFF 258 (311)
T ss_dssp --------CCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHTCCCC-CTTCC
T ss_pred --------ccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHcCCCCC-CcccC
Confidence 00112589999999999999999999999999999999999 77665544 4444554433211 11234
Q ss_pred chHHHHHHHcCCCCCCCCCChHH------HHcCcccCCC
Q 004987 335 PKEASFCLWLLHPEPSGRPKMGE------LLQSEFLNEP 367 (720)
Q Consensus 335 p~~~~Li~~~L~~dP~~Rpta~e------iL~hp~~~~~ 367 (720)
+...+||.+||++||++|||++| |++||||+..
T Consensus 259 ~~~~dli~~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~~i 297 (311)
T 4aw0_A 259 PKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 297 (311)
T ss_dssp HHHHHHHHHHSCSSGGGSTTSGGGTCHHHHHTSGGGTTC
T ss_pred HHHHHHHHHHccCCHhHCcChHHHcCCHHHHCCCCcCCC
Confidence 55569999999999999999988 5899999986
No 7
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=8.3e-44 Score=391.59 Aligned_cols=243 Identities=15% Similarity=0.250 Sum_probs=185.9
Q ss_pred ccCCcccccccccC-------CCCCCccccccccccCCCCccceeeeehhhhcccCCCCCceecccceeecCCCCCcEEE
Q 004987 26 SDSSRALNISGVSD-------RNPRLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVH 98 (720)
Q Consensus 26 ~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~g~~~~~~~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~l 98 (720)
....+.+|.|+++. .+.+.++++.+..... ...-+..+|+.+|++++|||||++|+ +++++. .+||
T Consensus 153 y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~---~~~~~~~~Ei~il~~l~HpnIV~l~~-~~~~~~---~~~i 225 (423)
T 4fie_A 153 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ---QRRELLFNEVVIMRDYQHENVVEMYN-SYLVGD---ELWV 225 (423)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTC---SSGGGHHHHHHHHHHCCCTTBCCEEE-EEEETT---EEEE
T ss_pred cEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccch---hHHHHHHHHHHHHHhCCCCCCCceEE-EEEECC---EEEE
Confidence 44456677777766 2334445554443322 11223347888999999999999999 565553 6899
Q ss_pred EEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcc
Q 004987 99 AIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHE 177 (720)
Q Consensus 99 V~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~ 177 (720)
|||| .||+|.+++... .+++.+++.|++||+.||+|||++|||||||||+||||+.+|.+||+|||+|+......
T Consensus 226 VmEy~~gG~L~~~i~~~--~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~-- 301 (423)
T 4fie_A 226 VMEFLEGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV-- 301 (423)
T ss_dssp EEECCTTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSC--
T ss_pred EEeCCCCCcHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEecCccceECCCCC--
Confidence 9999 899999999643 39999999999999999999999999999999999999999999998888874321110
Q ss_pred cccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhh
Q 004987 178 EGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQV 257 (720)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~ 257 (720)
.
T Consensus 302 -------------------------------~------------------------------------------------ 302 (423)
T 4fie_A 302 -------------------------------P------------------------------------------------ 302 (423)
T ss_dssp -------------------------------C------------------------------------------------
T ss_pred -------------------------------c------------------------------------------------
Confidence 0
Q ss_pred hcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCc-cc-cc
Q 004987 258 EEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPP-QL-LL 332 (720)
Q Consensus 258 ~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGvlL~eLlt---pf~~~~~~~~~~~~i~~~~~p~-~~-~~ 332 (720)
.....+||++|||||++.+..|+.++|||||||++|||++ ||...... ..+..+.....+. .. ..
T Consensus 303 ---------~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~-~~~~~i~~~~~~~~~~~~~ 372 (423)
T 4fie_A 303 ---------RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL-KAMKMIRDNLPPRLKNLHK 372 (423)
T ss_dssp ---------CBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-HHHHHHHHSCCCCCSCTTS
T ss_pred ---------cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH-HHHHHHHcCCCCCCccccc
Confidence 0012589999999999999999999999999999999999 67665444 4455555443221 22 22
Q ss_pred cCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004987 333 KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 333 ~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
..+...+||.+||.+||.+|||+.|+|+||||+...
T Consensus 373 ~s~~~~dli~~~L~~dP~~R~ta~ell~Hp~~~~~~ 408 (423)
T 4fie_A 373 VSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAG 408 (423)
T ss_dssp SCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCC
T ss_pred CCHHHHHHHHHHcCCChhHCcCHHHHhcCHHhcCCC
Confidence 344556999999999999999999999999998763
No 8
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=4.5e-44 Score=378.60 Aligned_cols=209 Identities=18% Similarity=0.241 Sum_probs=164.9
Q ss_pred eeeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004987 62 LRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 62 ~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~ 140 (720)
.+..+|..+|++++|||||++++ +++++. .+|+|||| .||+|.++|.+.+ .+++.+++.|+.||+.||+|||++
T Consensus 71 ~~~~~E~~il~~l~HpnIv~l~~-~~~~~~---~~~ivmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~ylH~~ 145 (304)
T 3ubd_A 71 VRTKMERDILVEVNHPFIVKLHY-AFQTEG---KLYLILDFLRGGDLFTRLSKEV-MFTEEDVKFYLAELALALDHLHSL 145 (304)
T ss_dssp C------CCCCCCCCTTEECEEE-EEEETT---EEEEEECCCTTCEEHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHCCCCCCCeEEE-EEEECC---EEEEEEEcCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC
Confidence 35557888999999999999999 665553 68999999 9999999996544 499999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004987 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
|||||||||+|||++.+|++||+|||+++......
T Consensus 146 ~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~--------------------------------------------- 180 (304)
T 3ubd_A 146 GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE--------------------------------------------- 180 (304)
T ss_dssp TCCCSSCCGGGEEECTTSCEEEESSEEEEC--------------------------------------------------
T ss_pred CCcCCCCCHHHeEEcCCCCEEecccccceeccCCC---------------------------------------------
Confidence 99999999999999999999998888874321100
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhh
Q 004987 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
......+||+.|||||++.+..|+.++|||||||+
T Consensus 181 ---------------------------------------------~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvi 215 (304)
T 3ubd_A 181 ---------------------------------------------KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVL 215 (304)
T ss_dssp ---------------------------------------------CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHH
T ss_pred ---------------------------------------------ccccccccCcccCCHHHhccCCCCCCCcccchHHH
Confidence 00012589999999999999999999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCCh-----HHHHcCcccCCC
Q 004987 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM-----GELLQSEFLNEP 367 (720)
Q Consensus 301 L~eLlt---pf~~~~~~~~~~~~i~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta-----~eiL~hp~~~~~ 367 (720)
||||++ ||...+.. ..+..+.+..++. .....+...+||.+||++||++|||+ +|+++||||+..
T Consensus 216 lyemltG~~PF~~~~~~-~~~~~i~~~~~~~-p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~Hp~f~~i 288 (304)
T 3ubd_A 216 MFEMLTGTLPFQGKDRK-ETMTMILKAKLGM-PQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTI 288 (304)
T ss_dssp HHHHHHSSCSSCCSSHH-HHHHHHHHCCCCC-CTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTSGGGTTC
T ss_pred HHHHHhCCCCCCCcCHH-HHHHHHHcCCCCC-CCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcCccccCC
Confidence 999999 77765554 4444444433221 11234555699999999999999984 799999999986
No 9
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=4.3e-44 Score=383.43 Aligned_cols=215 Identities=16% Similarity=0.105 Sum_probs=166.7
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004987 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~gIv 143 (720)
.+|..+|++++|||||++|+ +++++. .+|||||| .||+|.++|++.+ .+++.+++.|+.||+.||+|||++|||
T Consensus 98 ~~E~~il~~l~HpnIV~l~~-~~~~~~---~~~ivmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~ylH~~~Ii 172 (336)
T 4g3f_A 98 VEELVACAGLSSPRIVPLYG-AVREGP---WVNIFMELLEGGSLGQLIKQMG-CLPEDRALYYLGQALEGLEYLHTRRIL 172 (336)
T ss_dssp THHHHTTTTCCCTTBCCEEE-EEEETT---EEEEEECCCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHTTTEE
T ss_pred HHHHHHHHhCCCCCCCcEEE-EEEECC---EEEEEEeccCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCce
Confidence 36888999999999999999 565553 67999999 8999999996544 499999999999999999999999999
Q ss_pred eccCCCCcEEEccCC-ceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004987 144 VHNVRPSCFVMSSFN-HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 144 HrDLKP~NILl~~~~-~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
||||||+||||+.+| ++||+|||+++........ .
T Consensus 173 HRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~------------------------------------~-------- 208 (336)
T 4g3f_A 173 HGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLG------------------------------------K-------- 208 (336)
T ss_dssp CSCCCGGGEEECTTSCCEEECCCTTCEEC---------------------------------------------------
T ss_pred ecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcc------------------------------------c--------
Confidence 999999999999887 6999888887543221000 0
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004987 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGvlL~ 302 (720)
........+||+.|||||++.+..|+.++|||||||+||
T Consensus 209 -----------------------------------------~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvily 247 (336)
T 4g3f_A 209 -----------------------------------------SLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMML 247 (336)
T ss_dssp ----------------------------------------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHH
T ss_pred -----------------------------------------ceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHH
Confidence 000011257999999999999999999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCCC-ccccccCch-HHHHHHHcCCCCCCCCCChHHH-------------HcCccc
Q 004987 303 ELFC---PFSTGEEKTRTMSSLRHRVLP-PQLLLKFPK-EASFCLWLLHPEPSGRPKMGEL-------------LQSEFL 364 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~i~~~~~p-~~~~~~~p~-~~~Li~~~L~~dP~~Rpta~ei-------------L~hp~~ 364 (720)
||++ ||...... ..+..+.....+ ..++..++. ..+||.+||++||.+|||+.|+ |+|||+
T Consensus 248 emltG~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~~l~hPw~ 326 (336)
T 4g3f_A 248 HMLNGCHPWTQYFRG-PLCLKIASEPPPIREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVGGLKSPWK 326 (336)
T ss_dssp HHHHSSCSSTTTCCS-CCHHHHHHSCCGGGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTTSSCSCSS
T ss_pred HHHHCcCCCCCCCHH-HHHHHHHcCCCCchhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhhhccCCCc
Confidence 9999 67654333 223333333322 233344444 4599999999999999999998 569999
Q ss_pred CCCccc
Q 004987 365 NEPRDS 370 (720)
Q Consensus 365 ~~~~~~ 370 (720)
.+..++
T Consensus 327 ~~~~~P 332 (336)
T 4g3f_A 327 GEYKEP 332 (336)
T ss_dssp SSCCCC
T ss_pred CCCCCC
Confidence 887554
No 10
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=5.7e-43 Score=384.75 Aligned_cols=221 Identities=15% Similarity=0.162 Sum_probs=168.1
Q ss_pred eeeehhhhcccCCCCCceecccceeecC---CCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004987 63 RKHSDGVELTHGDHLRNQGGLSGVCENE---AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~---~~~~~~~lV~E~~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs 139 (720)
+..+|..+|++++|||||++++ ++... .....+|+||||.+|+|.++|.+. +.+++.+++.|++||+.||.|||+
T Consensus 99 ~~~~Ei~il~~l~HpnIv~l~~-~~~~~~~~~~~~~~~ivmE~~~g~L~~~i~~~-~~l~~~~~~~~~~qil~al~ylH~ 176 (398)
T 4b99_A 99 RTLRELKILKHFKHDNIIAIKD-ILRPTVPYGEFKSVYVVLDLMESDLHQIIHSS-QPLTLEHVRYFLYQLLRGLKYMHS 176 (398)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-ECCCSSCTTTCCCEEEEEECCSEEHHHHHTSS-SCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCcceEee-eeecccccccCCEEEEEEeCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH
Confidence 4447899999999999999999 44332 233478999999778999999554 459999999999999999999999
Q ss_pred cCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004987 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+|||||||||+|||++.+|.+||+|||+++.+.......
T Consensus 177 ~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~~~~~~----------------------------------------- 215 (398)
T 4b99_A 177 AQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEH----------------------------------------- 215 (398)
T ss_dssp TTCBCCCCCGGGEEECTTCCEEECCCTTCBCC------------------------------------------------
T ss_pred CcCcCCCcCccccccCCCCCEEEeecceeeecccCcccc-----------------------------------------
Confidence 999999999999999999999999888885432110000
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC-CCccccchhhh
Q 004987 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLG 298 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~-~s~~sDIwSLG 298 (720)
.......+||++|||||++.+.. |+.++||||||
T Consensus 216 ---------------------------------------------~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG 250 (398)
T 4b99_A 216 ---------------------------------------------QYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVG 250 (398)
T ss_dssp ---------------------------------------------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHH
T ss_pred ---------------------------------------------ccccccceeChHhcCHHHhcCCCCCCChhheehhH
Confidence 00011258999999999998865 79999999999
Q ss_pred hhhhhccc---cCCCCchHHHHHHHhhc-CCCCcc----------------------------ccccCchHHHHHHHcCC
Q 004987 299 VLLFELFC---PFSTGEEKTRTMSSLRH-RVLPPQ----------------------------LLLKFPKEASFCLWLLH 346 (720)
Q Consensus 299 vlL~eLlt---pf~~~~~~~~~~~~i~~-~~~p~~----------------------------~~~~~p~~~~Li~~~L~ 346 (720)
|++|||++ ||.+.+........+.. +.++.. +....+...+||.+||.
T Consensus 251 ~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~ 330 (398)
T 4b99_A 251 CIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLR 330 (398)
T ss_dssp HHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSC
T ss_pred HHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCc
Confidence 99999999 67665554332222211 111111 01123445699999999
Q ss_pred CCCCCCCChHHHHcCcccCCCccch
Q 004987 347 PEPSGRPKMGELLQSEFLNEPRDSM 371 (720)
Q Consensus 347 ~dP~~Rpta~eiL~hp~~~~~~~~l 371 (720)
+||.+|||+.|+|+||||+...++.
T Consensus 331 ~dP~~R~ta~e~L~Hp~f~~~~~p~ 355 (398)
T 4b99_A 331 FEPSARISAAAALRHPFLAKYHDPD 355 (398)
T ss_dssp SSTTTSCCHHHHTTSGGGTTTCCGG
T ss_pred CChhHCcCHHHHhcCHhhCcCCCCc
Confidence 9999999999999999999875543
No 11
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=3.5e-41 Score=357.25 Aligned_cols=238 Identities=15% Similarity=0.192 Sum_probs=174.7
Q ss_pred CcccccccccC----CCCCCccccccccccCCCCccceeeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-C
Q 004987 29 SRALNISGVSD----RNPRLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-G 103 (720)
Q Consensus 29 ~~~~~~~~~~~----~~~~~~~~~~~~~~g~~~~~~~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~ 103 (720)
.+.+|.|+|+. ...+.++++.+... ..+....-+..+|..+|++++|||||++++ ++..+ .+|+|||| .
T Consensus 41 ~~~iG~G~fG~Vy~~~~~~~vAvK~~~~~-~~~~~~~~~f~~E~~il~~l~HpNIV~l~g-~~~~~----~~~iVmEy~~ 114 (307)
T 3omv_A 41 STRIGSGSFGTVYKGKWHGDVAVKILKVV-DPTPEQFQAFRNEVAVLRKTRHVNILLFMG-YMTKD----NLAIVTQWCE 114 (307)
T ss_dssp EEECCCCSSSEEEEEESSSEEEEEECCCS-SCCHHHHHHHHHHHHHHTTCCCTTBCCEEE-EECSS----SCEEEEECCS
T ss_pred eeEEeeCCCcEEEEEEECCcEEEEEEEec-CCCHHHHHHHHHHHHHHHhCCCCCEeeEEE-EEECC----eEEEEEEcCC
Confidence 45567777766 22233333333221 111222223447888999999999999999 55433 46999999 9
Q ss_pred CCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccc
Q 004987 104 DVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQ 183 (720)
Q Consensus 104 g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~ 183 (720)
||+|.++|......+++.+++.|+.||+.||.|||++|||||||||+||||+.++.+||+|||+++........
T Consensus 115 gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~------ 188 (307)
T 3omv_A 115 GSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGS------ 188 (307)
T ss_dssp SCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEETTEEEEECCCSSCBC-------------
T ss_pred CCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEECCCCcEEEeeccCceecccCCcc------
Confidence 99999999766667999999999999999999999999999999999999999999999888877432111000
Q ss_pred cccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCC
Q 004987 184 NMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQP 263 (720)
Q Consensus 184 ~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~ 263 (720)
T Consensus 189 -------------------------------------------------------------------------------- 188 (307)
T 3omv_A 189 -------------------------------------------------------------------------------- 188 (307)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCccccccccCCcccCCccccCC---CCCccccchhhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCcc---ccccC
Q 004987 264 FPMKQILLMETNWYASPEELAGA---PVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQ---LLLKF 334 (720)
Q Consensus 264 ~~~~~~~~~Gt~~Y~APE~l~~~---~~s~~sDIwSLGvlL~eLlt---pf~~~~~~~~~~~~i~~~~~p~~---~~~~~ 334 (720)
......+||+.|||||++.+. +|+.++|||||||+||||+| ||............+..+..+|. ....+
T Consensus 189 --~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 266 (307)
T 3omv_A 189 --QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNC 266 (307)
T ss_dssp -------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCCCSTTSCTTS
T ss_pred --eeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCCcccccccc
Confidence 000124799999999999643 48999999999999999999 78766555555555555544433 23344
Q ss_pred ch-HHHHHHHcCCCCCCCCCChHHHHc
Q 004987 335 PK-EASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 335 p~-~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|. ..+||.+||+.||++|||+.||++
T Consensus 267 ~~~l~~li~~cl~~dP~~RPs~~ei~~ 293 (307)
T 3omv_A 267 PKAMKRLVADCVKKVKEERPLFPQILS 293 (307)
T ss_dssp CHHHHHHHHHHTCSSSTTSCCHHHHHH
T ss_pred hHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence 44 459999999999999999998864
No 12
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=7.5e-41 Score=363.74 Aligned_cols=235 Identities=18% Similarity=0.216 Sum_probs=162.7
Q ss_pred eeeehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004987 63 RKHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~ 140 (720)
+..+|..+|..+ +|||||++++ ++++.. ++|+|||| .|++|.++++ .+++.+++.|++||+.||+|||++
T Consensus 65 ~~~~E~~~l~~~~~h~nIv~l~~-~~~~~~---~~~lvmE~~~g~~L~~~~~----~l~~~~~~~~~~qll~al~ylH~~ 136 (361)
T 4f9c_A 65 RIAAELQCLTVAGGQDNVMGVKY-CFRKND---HVVIAMPYLEHESFLDILN----SLSFQEVREYMLNLFKALKRIHQF 136 (361)
T ss_dssp HHHHHHHHHHHTCSBTTBCCCSE-EEEETT---EEEEEEECCCCCCHHHHHT----TCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhcCCCCCceEEE-EEEECC---EEEEEEeCCCcccHHHHHc----CCCHHHHHHHHHHHHHHHHHHHHC
Confidence 445777888887 6999999999 665553 68999999 8999999993 399999999999999999999999
Q ss_pred CceeccCCCCcEEEccC-CceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004987 141 GIVVHNVRPSCFVMSSF-NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~-~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
|||||||||+|||++.+ +.+||+|||+|+........ ..+|+........
T Consensus 137 gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~~-----------------------------~~~~~~~~~~~~~ 187 (361)
T 4f9c_A 137 GIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIE-----------------------------LLKFVQSEAQQER 187 (361)
T ss_dssp TEECSCCSGGGEEEETTTTEEEECCCTTCEECTTCSCG-----------------------------GGGGC--------
T ss_pred CeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCcccc-----------------------------ccccccccccccc
Confidence 99999999999999866 89999999998654332111 1222211110000
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC-CCccccchhhh
Q 004987 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLG 298 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~-~s~~sDIwSLG 298 (720)
.....+. . . . .........+||++|+|||++.+.+ |+.++||||+|
T Consensus 188 ~~~~~~~---~--------------------~----~------~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG 234 (361)
T 4f9c_A 188 CSQNKCS---I--------------------C----L------SRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAG 234 (361)
T ss_dssp ---------------------------------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHH
T ss_pred ccccccc---c--------------------c----c------cccccccccccCccccCHHHHcCCCCCCCccchhhhH
Confidence 0000000 0 0 0 0000112368999999999998875 89999999999
Q ss_pred hhhhhccc---cCCCCchHHHHHHHhhc---------------------CCCC---------------------------
Q 004987 299 VLLFELFC---PFSTGEEKTRTMSSLRH---------------------RVLP--------------------------- 327 (720)
Q Consensus 299 vlL~eLlt---pf~~~~~~~~~~~~i~~---------------------~~~p--------------------------- 327 (720)
|++|||++ ||.+.......+..+.. ...|
T Consensus 235 ~il~ell~G~~Pf~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~ 314 (361)
T 4f9c_A 235 VIFLSLLSGRYPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQG 314 (361)
T ss_dssp HHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC---------------
T ss_pred HHHHHHHHCCCCCCCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhcccccccccccccccc
Confidence 99999999 77654433222221110 0000
Q ss_pred -----ccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004987 328 -----PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 328 -----~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
+.+....+...+||.+||++||++|||++|+|+||||++.
T Consensus 315 ~~~~~~~~~~is~~a~DLl~~lL~~dP~~R~ta~eaL~Hp~f~~i 359 (361)
T 4f9c_A 315 HATNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALLHPFFKDM 359 (361)
T ss_dssp -------CTTCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGTTC
T ss_pred ccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCCC
Confidence 0011122344599999999999999999999999999875
No 13
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=3.6e-40 Score=350.34 Aligned_cols=205 Identities=16% Similarity=0.174 Sum_probs=163.1
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC---------------CCCCCHHHHHHHH
Q 004987 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---------------KRSVDVYECLHIF 127 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~---------------~~~l~~~~~~~i~ 127 (720)
..+|+.+|++++|||||++++ ++..+. .+|+|||| .+|+|.++|... ...+++.+++.|+
T Consensus 76 f~~E~~il~~l~HpNIV~l~g-~~~~~~---~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~ 151 (308)
T 4gt4_A 76 FRHEAMLRARLQHPNVVCLLG-VVTKDQ---PLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLV 151 (308)
T ss_dssp HHHHHHHHHHCCCTTBCCEEE-EECSSS---SCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCCCcce-EEEECC---EEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHH
Confidence 347888999999999999999 555443 56999999 999999999432 1348999999999
Q ss_pred HHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccc
Q 004987 128 RQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRR 207 (720)
Q Consensus 128 ~QIl~aL~~LHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l 207 (720)
.||+.||.|||+++||||||||+||||+.++.+||+|||+++.....
T Consensus 152 ~qia~gl~yLH~~~iiHRDLK~~NILl~~~~~~Ki~DFGlar~~~~~--------------------------------- 198 (308)
T 4gt4_A 152 AQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAA--------------------------------- 198 (308)
T ss_dssp HHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCSCCBCGGGGG---------------------------------
T ss_pred HHHHHHHHHHHhCCCCCCCccccceEECCCCCEEECCcccceeccCC---------------------------------
Confidence 99999999999999999999999999999999999888877432100
Q ss_pred cccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC
Q 004987 208 EDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP 287 (720)
Q Consensus 208 ~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~ 287 (720)
+. .......+||+.|||||++.+..
T Consensus 199 -~~------------------------------------------------------~~~~~~~~gt~~ymAPE~l~~~~ 223 (308)
T 4gt4_A 199 -DY------------------------------------------------------YKLLGNSLLPIRWMAPEAIMYGK 223 (308)
T ss_dssp -GC------------------------------------------------------BCSSSSSCBCGGGCCHHHHHHCC
T ss_pred -Cc------------------------------------------------------eeEecccccCCcccCHHHHhCCC
Confidence 00 00001247899999999999999
Q ss_pred CCccccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004987 288 VSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 288 ~s~~sDIwSLGvlL~eLlt----pf~~~~~~~~~~~~i~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~h 361 (720)
|+.++|||||||+||||+| ||...... ..+..+..+..++......+...+|+.+||+.||++|||+.||+++
T Consensus 224 ~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~-~~~~~i~~~~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~ 300 (308)
T 4gt4_A 224 FSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ-DVVEMIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSR 300 (308)
T ss_dssp CCHHHHHHHHHHHHHHHHTTTCCTTTTCCHH-HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCccchhhhHHHHHHHHHhCCCCCCCCCCHH-HHHHHHHcCCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 9999999999999999997 77665543 4555566655554433333444599999999999999999999863
No 14
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=9e-40 Score=345.89 Aligned_cols=205 Identities=19% Similarity=0.188 Sum_probs=162.9
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC------------CCCCCHHHHHHHHHH
Q 004987 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP------------KRSVDVYECLHIFRQ 129 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~------------~~~l~~~~~~~i~~Q 129 (720)
+..+|..+|++++|||||++|+ ++.++. .+|+|||| .||+|.++|.+. ...+++.+++.|+.|
T Consensus 61 ~f~~E~~il~~l~HpnIV~l~g-~~~~~~---~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~q 136 (299)
T 4asz_A 61 DFHREAELLTNLQHEHIVKFYG-VCVEGD---PLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQ 136 (299)
T ss_dssp HHHHHHHHHTTCCCTTBCCEEE-EECSSS---SEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCccEEE-EEeeCC---EEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHH
Confidence 3447888999999999999999 565543 57999999 999999999542 245999999999999
Q ss_pred HHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccc
Q 004987 130 IVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRRED 209 (720)
Q Consensus 130 Il~aL~~LHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~D 209 (720)
|+.||.|||+++||||||||+|||++.++.+||+|||+++..... +
T Consensus 137 ia~gl~yLH~~~iiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~----------------------------------~ 182 (299)
T 4asz_A 137 IAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYST----------------------------------D 182 (299)
T ss_dssp HHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGG----------------------------------G
T ss_pred HHHHHHHHHhCCcccCccCHhhEEECCCCcEEECCcccceecCCC----------------------------------C
Confidence 999999999999999999999999999999999888877321100 0
Q ss_pred cccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCC
Q 004987 210 LQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVS 289 (720)
Q Consensus 210 fgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s 289 (720)
. . .......||+.|||||++.+..|+
T Consensus 183 ~----------------------------------~--------------------~~~~~~~gt~~ymAPE~~~~~~~~ 208 (299)
T 4asz_A 183 Y----------------------------------Y--------------------RVGGHTMLPIRWMPPESIMYRKFT 208 (299)
T ss_dssp C----------------------------------E--------------------EETTTEEECGGGCCHHHHHHCCCC
T ss_pred c----------------------------------e--------------------eecCceecChhhcCHHHHcCCCCC
Confidence 0 0 000114689999999999999999
Q ss_pred ccccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004987 290 CASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 290 ~~sDIwSLGvlL~eLlt----pf~~~~~~~~~~~~i~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
.++|||||||+||||+| ||...... ..+..+..+..++......+...+||.+||+.||++|||+.||++
T Consensus 209 ~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~-~~~~~i~~~~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~ 282 (299)
T 4asz_A 209 TESDVWSLGVVLWEIFTYGKQPWYQLSNN-EVIECITQGRVLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHT 282 (299)
T ss_dssp HHHHHHHHHHHHHHHHTTTCCTTTTSCHH-HHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred chhhHHHHHHHHHHHHcCCCCCCCCCCHH-HHHHHHHcCCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 99999999999999997 67665443 455556555544433333344559999999999999999999953
No 15
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=3e-40 Score=379.27 Aligned_cols=203 Identities=17% Similarity=0.174 Sum_probs=161.6
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004987 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~gIvH 144 (720)
.+..+++.++|||||++++ ++++.. .+|+|||| .||+|.++|.+.+ .+++..++.|+.||+.||+|||++||||
T Consensus 241 ~~l~ll~~~~HP~IV~l~~-~f~~~~---~lylVmEy~~GGdL~~~l~~~~-~l~E~~a~~y~~qIl~aL~yLH~~gIiH 315 (689)
T 3v5w_A 241 IMLSLVSTGDCPFIVCMSY-AFHTPD---KLSFILDLMNGGDLHYHLSQHG-VFSEADMRFYAAEIILGLEHMHNRFVVY 315 (689)
T ss_dssp HHHHHHSSSCCTTBCCEEE-EEECSS---EEEEEECCCCSCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHTTTEEC
T ss_pred HHHHHHhhCCCCCEeEEEE-EEEECC---EEEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 4455778899999999999 666654 67999999 9999999996544 4999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004987 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+||||+.+|++||+|||+|+.....
T Consensus 316 RDLKPeNILld~~G~vKL~DFGlA~~~~~~-------------------------------------------------- 345 (689)
T 3v5w_A 316 RDLKPANILLDEHGHVRISDLGLACDFSKK-------------------------------------------------- 345 (689)
T ss_dssp CCCSGGGEEECTTSCEEECCCTTCEECSSC--------------------------------------------------
T ss_pred cCCchHHeEEeCCCCEEecccceeeecCCC--------------------------------------------------
Confidence 999999999999999999888887432111
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-CCCCccccchhhhhhhhh
Q 004987 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFE 303 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~~sDIwSLGvlL~e 303 (720)
.....+||+.|||||++.+ ..|+.++|||||||+|||
T Consensus 346 ------------------------------------------~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYE 383 (689)
T 3v5w_A 346 ------------------------------------------KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFK 383 (689)
T ss_dssp ------------------------------------------CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHH
T ss_pred ------------------------------------------CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHH
Confidence 0011589999999999974 569999999999999999
Q ss_pred ccc---cCCCCc--hHHHHHHHhhcCCCCccccc-cCchHHHHHHHcCCCCCCCCCC-----hHHHHcCcccCCC
Q 004987 304 LFC---PFSTGE--EKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~--~~~~~~~~i~~~~~p~~~~~-~~p~~~~Li~~~L~~dP~~Rpt-----a~eiL~hp~~~~~ 367 (720)
|++ ||.... ........+....+ .++. ..+...+||.+||++||.+|++ ++||++||||+..
T Consensus 384 mLtG~~PF~~~~~~~~~~i~~~i~~~~~--~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~HpfF~~i 456 (689)
T 3v5w_A 384 LLRGHSPFRQHKTKDKHEIDRMTLTMAV--ELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSL 456 (689)
T ss_dssp HHHSSCTTCGGGCCCHHHHHHHHHHCCC--CCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTSGGGTTC
T ss_pred HHhCCCCCCCCChHHHHHHHHhhcCCCC--CCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcCccccCC
Confidence 999 564322 22233333333221 2222 3345569999999999999997 7999999999986
No 16
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=3.4e-39 Score=346.05 Aligned_cols=205 Identities=15% Similarity=0.139 Sum_probs=159.4
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC--------------CCCCHHHHHHHH
Q 004987 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK--------------RSVDVYECLHIF 127 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~--------------~~l~~~~~~~i~ 127 (720)
+..+|+.+|++++|||||++++ ++.+.. .+|+|||| .+|+|.++|.+.. .++++.+++.|+
T Consensus 89 ~f~~E~~il~~l~HpnIV~l~g-~~~~~~---~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~ 164 (329)
T 4aoj_A 89 DFQREAELLTMLQHQHIVRFFG-VCTEGR---PLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 164 (329)
T ss_dssp HHHHHHHHHTTCCCTTBCCEEE-EECSSS---SEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCCcEEE-EEEECC---EEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHH
Confidence 3447888999999999999999 555443 57999999 9999999995432 358999999999
Q ss_pred HHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccc
Q 004987 128 RQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRR 207 (720)
Q Consensus 128 ~QIl~aL~~LHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l 207 (720)
.||+.||.|||+++||||||||+||||+.++.+||+|||+++......
T Consensus 165 ~qia~gl~yLH~~~iiHRDLKp~NILl~~~~~~Ki~DFGla~~~~~~~-------------------------------- 212 (329)
T 4aoj_A 165 SQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTD-------------------------------- 212 (329)
T ss_dssp HHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECCCC-----------------------------------------
T ss_pred HHHHHHHHHHhcCCeecccccHhhEEECCCCcEEEcccccceeccCCC--------------------------------
Confidence 999999999999999999999999999999999998888874321110
Q ss_pred cccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC
Q 004987 208 EDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP 287 (720)
Q Consensus 208 ~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~ 287 (720)
. .......+||+.|||||++.+..
T Consensus 213 --~------------------------------------------------------~~~~~~~~gt~~ymAPE~~~~~~ 236 (329)
T 4aoj_A 213 --Y------------------------------------------------------YRVGGRTMLPIRWMPPESILYRK 236 (329)
T ss_dssp ---------------------------------------------------------------CCCCGGGCCHHHHTTCC
T ss_pred --c------------------------------------------------------ceecCcccccccccChhhhcCCC
Confidence 0 00001147899999999999999
Q ss_pred CCccccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004987 288 VSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 288 ~s~~sDIwSLGvlL~eLlt----pf~~~~~~~~~~~~i~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|+.++|||||||+||||+| ||...... ..+..+..+..++......+...+||.+||+.||++|||+.||++
T Consensus 237 ~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~-~~~~~i~~g~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~ 312 (329)
T 4aoj_A 237 FTTESDVWSFGVVLWEIFTYGKQPWYQLSNT-EAIDCITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHA 312 (329)
T ss_dssp CCHHHHHHHHHHHHHHHHTTSCCTTCSSCHH-HHHHHHHHTCCCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHH
T ss_pred CCccccccchHHHHHHHHcCCCCCCCCCCHH-HHHHHHHcCCCCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHH
Confidence 9999999999999999997 67665443 445555554433333333345569999999999999999999986
No 17
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=8.7e-39 Score=367.79 Aligned_cols=208 Identities=17% Similarity=0.262 Sum_probs=169.9
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004987 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~gIvH 144 (720)
+|..+|+.++|||||++++ ++++.. .+|+|||| .||+|.++|......+++.+++.|++||+.||.|||++||+|
T Consensus 203 ~Ei~il~~l~hpnIv~l~~-~~~~~~---~~~iv~E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiH 278 (573)
T 3uto_A 203 KEIQTMSVLRHPTLVNLHD-AFEDDN---EMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVH 278 (573)
T ss_dssp HHHHHHHHTCCTTBCCEEE-EEECSS---EEEEEEECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhCCCCCCCeEEE-EEEECC---EEEEEEeecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCeee
Confidence 6888999999999999999 666554 68999999 899999999655556999999999999999999999999999
Q ss_pred ccCCCCcEEEccC--CceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004987 145 HNVRPSCFVMSSF--NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 145 rDLKP~NILl~~~--~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
|||||+|||++.+ +.+||+|||+++......
T Consensus 279 RDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~----------------------------------------------- 311 (573)
T 3uto_A 279 LDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ----------------------------------------------- 311 (573)
T ss_dssp CCCCGGGEEESSSSCCCEEECCCSSCEECCTTS-----------------------------------------------
T ss_pred ccCChhhccccCCCCCCEEEeeccceeEccCCC-----------------------------------------------
Confidence 9999999999854 889998888874321110
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004987 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGvlL~ 302 (720)
.....+||++|||||++.+..|+.++|||||||+||
T Consensus 312 --------------------------------------------~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvily 347 (573)
T 3uto_A 312 --------------------------------------------SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSY 347 (573)
T ss_dssp --------------------------------------------EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHH
T ss_pred --------------------------------------------ceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHH
Confidence 001247999999999999999999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcC--CCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004987 303 ELFC---PFSTGEEKTRTMSSLRHR--VLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~i~~~--~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
||++ ||...... ..+..+... .+++.....+ +...+||.+||++||.+|||+.|+|+||||+....
T Consensus 348 eml~G~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~Hpw~~~~~~ 419 (573)
T 3uto_A 348 ILLSGLSPFGGENDD-ETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNA 419 (573)
T ss_dssp HHHHSCCSSCCSSHH-HHHHHHHTTCCCCCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTSCCCC
T ss_pred HHHHCCCCCCCcCHH-HHHHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCcCcCCCCC
Confidence 9999 67665554 444455443 2334433444 44559999999999999999999999999997644
No 18
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=1e-38 Score=345.24 Aligned_cols=207 Identities=20% Similarity=0.206 Sum_probs=164.0
Q ss_pred eeehhhhcccCCC-CCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC---------------CCCCCHHHHHHH
Q 004987 64 KHSDGVELTHGDH-LRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---------------KRSVDVYECLHI 126 (720)
Q Consensus 64 ~~~e~~~L~~l~H-pnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~---------------~~~l~~~~~~~i 126 (720)
..+|..+|++++| ||||++++++.+++. .+|+|||| .+|+|.++|++. ...+++.+++.|
T Consensus 114 ~~~E~~il~~l~hhpnIV~l~g~~~~~~~---~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 190 (353)
T 4ase_A 114 LMSELKILIHIGHHLNVVNLLGACTKPGG---PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 190 (353)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEEEECCTTS---CCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHH
T ss_pred HHHHHHHHHHcCCCCcEEEEEEEEEecCC---EEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHH
Confidence 3478889999876 899999994334332 46999999 999999999532 234899999999
Q ss_pred HHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccc
Q 004987 127 FRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLR 206 (720)
Q Consensus 127 ~~QIl~aL~~LHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~ 206 (720)
+.||+.||.|||+++||||||||+|||++.++.+||+|||+++....+.
T Consensus 191 ~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~~vKi~DFGlar~~~~~~------------------------------- 239 (353)
T 4ase_A 191 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP------------------------------- 239 (353)
T ss_dssp HHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCT-------------------------------
T ss_pred HHHHHHHHHhHhhCCeecCccCccceeeCCCCCEEECcchhhhhcccCC-------------------------------
Confidence 9999999999999999999999999999999999998888775432110
Q ss_pred ccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC
Q 004987 207 REDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA 286 (720)
Q Consensus 207 l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~ 286 (720)
+. .......||+.|||||++.+.
T Consensus 240 --~~-------------------------------------------------------~~~~~~~gt~~ymAPE~l~~~ 262 (353)
T 4ase_A 240 --DY-------------------------------------------------------VRKGDARLPLKWMAPETIFDR 262 (353)
T ss_dssp --TS-------------------------------------------------------EEETTEEECGGGCCHHHHHHC
T ss_pred --Cc-------------------------------------------------------eeeccccccccccCHHHHhcC
Confidence 00 001124789999999999999
Q ss_pred CCCccccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004987 287 PVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 287 ~~s~~sDIwSLGvlL~eLlt----pf~~~~~~~~~~~~i~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~h 361 (720)
.|+.++|||||||+||||+| ||............+..+..++......+...+||.+||+.||++|||+.||++|
T Consensus 263 ~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~~~~~i~~g~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~ 341 (353)
T 4ase_A 263 VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 341 (353)
T ss_dssp CCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCCCcccEeehHHHHHHHHhCCCCCCCCCCHHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence 99999999999999999997 7776554445555666555444333344556699999999999999999999975
No 19
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.1e-38 Score=338.96 Aligned_cols=212 Identities=12% Similarity=0.105 Sum_probs=155.3
Q ss_pred ceeeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004987 61 ELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 61 ~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs 139 (720)
.+..++|...+.+++|||||++++.+.........+|+|||| .||+|.++|+.. .+++..+..++.||+.||.|||+
T Consensus 41 ~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~--~l~~~~~~~i~~~ia~gl~ylH~ 118 (303)
T 3hmm_A 41 SWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHM 118 (303)
T ss_dssp HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecCCCCCcHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHH
Confidence 344567888888999999999999544444444468999999 899999999654 38999999999999999999998
Q ss_pred c--------CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccc
Q 004987 140 Q--------GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQ 211 (720)
Q Consensus 140 ~--------gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfg 211 (720)
+ |||||||||+||||+.++.+||+|||+++...... +.
T Consensus 119 ~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~---------------------------------~~- 164 (303)
T 3hmm_A 119 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSAT---------------------------------DT- 164 (303)
T ss_dssp CBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEETTT---------------------------------TE-
T ss_pred hhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccccCCC---------------------------------Cc-
Confidence 7 99999999999999999999998888774321110 00
Q ss_pred cccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-----
Q 004987 212 LVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA----- 286 (720)
Q Consensus 212 la~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~----- 286 (720)
........+||++|||||++.+.
T Consensus 165 ----------------------------------------------------~~~~~~~~~GT~~ymAPE~l~~~~~~~~ 192 (303)
T 3hmm_A 165 ----------------------------------------------------IDIAPNHRVGTKRYMAPEVLDDSINMKH 192 (303)
T ss_dssp ----------------------------------------------------ESCC-----CCGGGCCHHHHTTCSCTTC
T ss_pred ----------------------------------------------------eeeecccccccccccCHHHhcccccccC
Confidence 00001125799999999999765
Q ss_pred -CCCccccchhhhhhhhhccc---cCC----------CC----chHHHHHHHhhcCCCCccccccC------chHHHHHH
Q 004987 287 -PVSCASDIYRLGVLLFELFC---PFS----------TG----EEKTRTMSSLRHRVLPPQLLLKF------PKEASFCL 342 (720)
Q Consensus 287 -~~s~~sDIwSLGvlL~eLlt---pf~----------~~----~~~~~~~~~i~~~~~p~~~~~~~------p~~~~Li~ 342 (720)
.|+.++|||||||+||||+| ||. .. .........+....+.|.++..+ ....+|+.
T Consensus 193 ~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~ 272 (303)
T 3hmm_A 193 FESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMR 272 (303)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHH
T ss_pred CccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHH
Confidence 36789999999999999998 221 10 11223333343443433333222 12358999
Q ss_pred HcCCCCCCCCCChHHHHc
Q 004987 343 WLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 343 ~~L~~dP~~Rpta~eiL~ 360 (720)
+||+.||++|||+.||++
T Consensus 273 ~cl~~dP~~RPt~~ei~~ 290 (303)
T 3hmm_A 273 ECWYANGAARLTALRIKK 290 (303)
T ss_dssp TTCCSSGGGSCCHHHHHH
T ss_pred HHcccCHhHCcCHHHHHH
Confidence 999999999999999985
No 20
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=4.5e-36 Score=317.46 Aligned_cols=209 Identities=15% Similarity=0.190 Sum_probs=167.7
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004987 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~gIv 143 (720)
.+|..++.+++||||+++++ ++..+. .+|+|||| .|++|.+++... .+++.+++.++.||+.||.|||++||+
T Consensus 65 ~~E~~~l~~l~hp~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~ 138 (297)
T 3fxz_A 65 INEILVMRENKNPNIVNYLD-SYLVGD---ELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSNQVI 138 (297)
T ss_dssp HHHHHHHHHCCCTTBCCEEE-EEEETT---EEEEEEECCTTCBHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHhcCCCCCCCeEeE-EEEECC---EEEEEEECCCCCCHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCce
Confidence 46778899999999999999 555443 57999999 899999999654 389999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004987 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.+||+|||++........
T Consensus 139 H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~----------------------------------------------- 171 (297)
T 3fxz_A 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS----------------------------------------------- 171 (297)
T ss_dssp CCCCSGGGEEECTTCCEEECCCTTCEECCSTTC-----------------------------------------------
T ss_pred eCCCCHHHEEECCCCCEEEeeCCCceecCCccc-----------------------------------------------
Confidence 999999999999999999998888743211100
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004987 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGvlL~e 303 (720)
......||+.|+|||++.+..++.++|||||||++||
T Consensus 172 -------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e 208 (297)
T 3fxz_A 172 -------------------------------------------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIE 208 (297)
T ss_dssp -------------------------------------------CBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHH
T ss_pred -------------------------------------------ccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHH
Confidence 0011478999999999999999999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCCCccccccCch-HHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004987 304 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~i~~~~~p~~~~~~~p~-~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
|++ ||..........................+. ..+|+.+||++||.+|||+.|+|+||||+....
T Consensus 209 ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~ 278 (297)
T 3fxz_A 209 MIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQFLKIAKP 278 (297)
T ss_dssp HHHSSCTTTTSCHHHHHHHHHHHCSCCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCCC
T ss_pred HHhCCCCCCCCCHHHHHHHHHhCCCCCCCCccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhcccCc
Confidence 999 676655544444333333333333333444 459999999999999999999999999997643
No 21
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=1.2e-36 Score=325.03 Aligned_cols=226 Identities=24% Similarity=0.382 Sum_probs=177.5
Q ss_pred eeeehhhhcccCCCCCceecccceeecCC---------------------------------------------------
Q 004987 63 RKHSDGVELTHGDHLRNQGGLSGVCENEA--------------------------------------------------- 91 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~--------------------------------------------------- 91 (720)
+..+|..+|++++|||||++++.+.+...
T Consensus 50 ~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (332)
T 3qd2_B 50 KVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQP 129 (332)
T ss_dssp HHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHHHC------------------------------------------
T ss_pred HHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccC
Confidence 34478889999999999999994443321
Q ss_pred --CCCcEEEEEec-CCCCHHHHHhCCC--CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccC
Q 004987 92 --AIDPFVHAIEW-GDVSLRQWLDKPK--RSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESA 166 (720)
Q Consensus 92 --~~~~~~lV~E~-~g~sL~~~L~~~~--~~l~~~~~~~i~~QIl~aL~~LHs~gIvHrDLKP~NILl~~~~~vkliDfg 166 (720)
....+++|||| .|++|.+++.... ...++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||
T Consensus 130 ~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG 209 (332)
T 3qd2_B 130 SSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFG 209 (332)
T ss_dssp --CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCT
T ss_pred CCCCceEEEEEEecCCCCHHHHHhcccCccchhhHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCCCCEEEeecC
Confidence 11247999999 8999999995533 235667799999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccCCCcccccccccccccccc
Q 004987 167 SCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHK 246 (720)
Q Consensus 167 ~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~ 246 (720)
++........... .+.
T Consensus 210 ~a~~~~~~~~~~~-----------------------------~~~----------------------------------- 225 (332)
T 3qd2_B 210 LVTAMDQDEEEQT-----------------------------VLT----------------------------------- 225 (332)
T ss_dssp TCEECSCC------------------------------------------------------------------------
T ss_pred cccccccchhhcc-----------------------------ccc-----------------------------------
Confidence 8855432210000 000
Q ss_pred ccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhccccCCCCchHHHHHHHhhcCCC
Q 004987 247 ILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRVL 326 (720)
Q Consensus 247 ~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGvlL~eLltpf~~~~~~~~~~~~i~~~~~ 326 (720)
............||+.|+|||++.+..++.++|||||||++|||++|+.+..........+....+
T Consensus 226 --------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~~~~~~~~~~~~ 291 (332)
T 3qd2_B 226 --------------PMPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVRIITDVRNLKF 291 (332)
T ss_dssp --------------------CCCSCC-CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHTTCC
T ss_pred --------------cccccccccccCCCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHHHHHHHhhccCC
Confidence 000000011247899999999999999999999999999999999999887776677777777777
Q ss_pred CccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCC
Q 004987 327 PPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 366 (720)
Q Consensus 327 p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~ 366 (720)
|..+....+...+||.+||++||.+|||+.|+|+||||++
T Consensus 292 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~f~~ 331 (332)
T 3qd2_B 292 PLLFTQKYPQEHMMVQDMLSPSPTERPEATDIIENAIFEN 331 (332)
T ss_dssp CHHHHHHCHHHHHHHHHHHCSSGGGSCCHHHHHHSTTCCC
T ss_pred CcccccCChhHHHHHHHHccCCCCcCCCHHHHhhchhhhc
Confidence 7777777788889999999999999999999999999986
No 22
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=3.1e-36 Score=323.64 Aligned_cols=208 Identities=17% Similarity=0.215 Sum_probs=165.8
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004987 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~g 141 (720)
+..+|..+|..++||||+++++ ++.... .+|+|||| .|++|.+++...+ .+++.+++.++.||+.||.|||++|
T Consensus 60 ~~~~E~~~l~~l~hpnIv~l~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~al~~lH~~~ 134 (328)
T 3fe3_A 60 KLFREVRIMKILNHPNIVKLFE-VIETEK---TLYLIMEYASGGEVFDYLVAHG-RMKEKEARSKFRQIVSAVQYCHQKR 134 (328)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EEECSS---EEEEEECCCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCEeeEEE-EEEECC---EEEEEEECCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 4447888999999999999999 555543 57999999 8999999995543 4999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004987 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||++.......
T Consensus 135 ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~---------------------------------------------- 168 (328)
T 3fe3_A 135 IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG---------------------------------------------- 168 (328)
T ss_dssp CCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSC----------------------------------------------
T ss_pred EeccCCCHHHEEEcCCCCEEEeeccCceecCCCC----------------------------------------------
Confidence 9999999999999999999999888773221000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCC-Cccccchhhhhh
Q 004987 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYRLGVL 300 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~-s~~sDIwSLGvl 300 (720)
.....+||++|+|||++.+..+ +.++|||||||+
T Consensus 169 ---------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~i 203 (328)
T 3fe3_A 169 ---------------------------------------------KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVI 203 (328)
T ss_dssp ---------------------------------------------GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHH
T ss_pred ---------------------------------------------ccccccCCcceeCcccccCCCcCCchhhhhhhHHH
Confidence 0011478999999999998886 489999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004987 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 301 L~eLlt---pf~~~~~~~~~~~~i~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
+|+|++ ||...... .....+..+..+.. ....+...+|+.+||..||.+|||++|+|+||||+...
T Consensus 204 l~ell~g~~pf~~~~~~-~~~~~i~~~~~~~p-~~~s~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~~~ 272 (328)
T 3fe3_A 204 LYTLVSGSLPFDGQNLK-ELRERVLRGKYRIP-FYMSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINAGH 272 (328)
T ss_dssp HHHHHHSSCSSCCSSHH-HHHHHHHHCCCCCC-TTSCHHHHHHHHHHCCSSTTTSCCHHHHTTCTTTTTTC
T ss_pred HHHHHhCCCCCCCCCHH-HHHHHHHhCCCCCC-CCCCHHHHHHHHHHCCCChhHCcCHHHHhcCHhhcCCC
Confidence 999999 67665444 33333333322211 12345556999999999999999999999999998753
No 23
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=1.1e-35 Score=323.72 Aligned_cols=207 Identities=18% Similarity=0.256 Sum_probs=166.5
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004987 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~gI 142 (720)
..+|..+|.+++|||||++++ ++++.. .+|+|||| .|++|.+++... ..+++.+++.++.||+.||.|||++||
T Consensus 62 ~~~E~~il~~l~hpnIv~l~~-~~~~~~---~~~lv~e~~~gg~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~gi 136 (361)
T 2yab_A 62 IEREVSILRQVLHPNIITLHD-VYENRT---DVVLILELVSGGELFDFLAQK-ESLSEEEATSFIKQILDGVNYLHTKKI 136 (361)
T ss_dssp HHHHHHHHTTCCCTTBCCEEE-EEECSS---EEEEEEECCCSCBHHHHHTTC-SCCBHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHhCCCcCCCcEEE-EEEeCC---EEEEEEEcCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 347888999999999999999 665543 67999999 799999999554 459999999999999999999999999
Q ss_pred eeccCCCCcEEEccCC----ceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCC
Q 004987 143 VVHNVRPSCFVMSSFN----HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 143 vHrDLKP~NILl~~~~----~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~ 218 (720)
+||||||+|||++.++ .+||+|||++.......
T Consensus 137 vHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~~~~~------------------------------------------- 173 (361)
T 2yab_A 137 AHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV------------------------------------------- 173 (361)
T ss_dssp ECCCCSGGGEEESCTTSSSCCEEECCCSSCEECCTTC-------------------------------------------
T ss_pred ccCCCCHHHEEEeCCCCCccCEEEEecCCceEcCCCC-------------------------------------------
Confidence 9999999999998776 79998888773321100
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhh
Q 004987 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
.....+||+.|+|||++.+..++.++||||||
T Consensus 174 ------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG 205 (361)
T 2yab_A 174 ------------------------------------------------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIG 205 (361)
T ss_dssp ------------------------------------------------CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHH
T ss_pred ------------------------------------------------ccccCCCCccEECchHHcCCCCCccccHHHHH
Confidence 00114689999999999998899999999999
Q ss_pred hhhhhccc---cCCCCchHHHHHHHhhcCC--CCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004987 299 VLLFELFC---PFSTGEEKTRTMSSLRHRV--LPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 299 vlL~eLlt---pf~~~~~~~~~~~~i~~~~--~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|++|+|++ ||...... ..+..+.... +++......+ ...+||.+||.+||.+|||+.|+|+||||+..
T Consensus 206 vil~~ll~g~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~ 279 (361)
T 2yab_A 206 VITYILLSGASPFLGDTKQ-ETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPV 279 (361)
T ss_dssp HHHHHHHHSCCSSCCSSHH-HHHHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTSCS
T ss_pred HHHHHHHhCCCCCCCCCHH-HHHHHHHhcCCCCCchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhcCcCcCCC
Confidence 99999999 66655443 3444444332 3334434444 44599999999999999999999999999875
No 24
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=4e-36 Score=319.92 Aligned_cols=206 Identities=21% Similarity=0.278 Sum_probs=163.2
Q ss_pred eehhhhccc-CCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004987 65 HSDGVELTH-GDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~L~~-l~HpnIV~l~~~~~~~~~~~~~~~lV~E~~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~gIv 143 (720)
..|...+.+ ..|||||++++ ++..+. .+|+||||.+++|.+++...+..+++..++.++.||+.||.|||++||+
T Consensus 104 ~~e~~~~~~~~~h~~iv~l~~-~~~~~~---~~~lv~e~~~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iv 179 (311)
T 3p1a_A 104 LAEVGSHEKVGQHPCCVRLEQ-AWEEGG---ILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLV 179 (311)
T ss_dssp HHHHHHHHHHCCCTTBCCEEE-EEEETT---EEEEEEECCCCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHHhcCCCcEEEEEE-EEEeCC---EEEEEEeccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEe
Confidence 344444444 48999999999 555443 6799999988899999966556699999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004987 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.+||+|||++...+...
T Consensus 180 H~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~------------------------------------------------ 211 (311)
T 3p1a_A 180 HLDVKPANIFLGPRGRCKLGDFGLLVELGTAG------------------------------------------------ 211 (311)
T ss_dssp CCCCSGGGEEECGGGCEEECCCTTCEECC---------------------------------------------------
T ss_pred cCCCCHHHEEECCCCCEEEccceeeeecccCC------------------------------------------------
Confidence 99999999999999999999888874321110
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004987 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGvlL~e 303 (720)
......||+.|+|||++.+ .++.++|||||||++||
T Consensus 212 -------------------------------------------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~e 247 (311)
T 3p1a_A 212 -------------------------------------------AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILE 247 (311)
T ss_dssp ----------------------------------------------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHH
T ss_pred -------------------------------------------CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHH
Confidence 0011368999999999987 58999999999999999
Q ss_pred ccccCCCCchHHHHHHHhhcCCCCccccccCchH-HHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004987 304 LFCPFSTGEEKTRTMSSLRHRVLPPQLLLKFPKE-ASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 304 Lltpf~~~~~~~~~~~~i~~~~~p~~~~~~~p~~-~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|+++....... .....+.....++.+....+.. .+||.+||++||.+|||+.|+|+||||+++
T Consensus 248 l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~~~~p 311 (311)
T 3p1a_A 248 VACNMELPHGG-EGWQQLRQGYLPPEFTAGLSSELRSVLVMMLEPDPKLRATAEALLALPVLRQP 311 (311)
T ss_dssp HHHTCCCCSSH-HHHHHHTTTCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGSCC
T ss_pred HHhCCCCCCCc-cHHHHHhccCCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHHhCccccCC
Confidence 99953322222 2344556666666666655554 499999999999999999999999999863
No 25
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=3e-35 Score=312.08 Aligned_cols=210 Identities=19% Similarity=0.248 Sum_probs=157.0
Q ss_pred ehhhhccc---CCCCCceecccceeecCC--CCCcEEEEEecCCCCHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHH
Q 004987 66 SDGVELTH---GDHLRNQGGLSGVCENEA--AIDPFVHAIEWGDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 66 ~e~~~L~~---l~HpnIV~l~~~~~~~~~--~~~~~~lV~E~~g~sL~~~L~~~~-~~l~~~~~~~i~~QIl~aL~~LHs 139 (720)
+|..++.+ ++||||+++++ ++.... ....++++|||.+++|.+++.... ..+++.+++.++.||+.||.|||+
T Consensus 60 ~e~~~l~~l~~~~h~niv~~~~-~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~ 138 (308)
T 3g33_A 60 REVALLRRLEAFEHPNVVRLMD-VCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHA 138 (308)
T ss_dssp HHHHHHHHHHHHCCTTBCCEEE-EEEECCSSSEEEEEEEEECCCCBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhcCCCCeEEeee-eeeccCCCCceeEEEEehhhhcCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 45555554 45999999999 554332 223579999997779999995543 349999999999999999999999
Q ss_pred cCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004987 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||+||||||+|||++.++.+||+|||.+...+...
T Consensus 139 ~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~-------------------------------------------- 174 (308)
T 3g33_A 139 NCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQM-------------------------------------------- 174 (308)
T ss_dssp TTCCCSCCCTTTEEECTTSCEEECSCSCTTTSTTCC--------------------------------------------
T ss_pred CCcccCCCCHHHEEEcCCCCEEEeeCccccccCCCc--------------------------------------------
Confidence 999999999999999999999999888874321110
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhh
Q 004987 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
......||+.|+|||++.+..++.++|||||||
T Consensus 175 -----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~ 207 (308)
T 3g33_A 175 -----------------------------------------------ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGC 207 (308)
T ss_dssp -----------------------------------------------CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHH
T ss_pred -----------------------------------------------ccCCccccccccCchHHcCCCCCchHHHHHHHH
Confidence 001147899999999999999999999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhc-CCCCcc-----------------------ccccC-chHHHHHHHcCCCCCCC
Q 004987 300 LLFELFC---PFSTGEEKTRTMSSLRH-RVLPPQ-----------------------LLLKF-PKEASFCLWLLHPEPSG 351 (720)
Q Consensus 300 lL~eLlt---pf~~~~~~~~~~~~i~~-~~~p~~-----------------------~~~~~-p~~~~Li~~~L~~dP~~ 351 (720)
++|||++ ||............+.. +..++. ..... +...+||.+||++||.+
T Consensus 208 il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~ 287 (308)
T 3g33_A 208 IFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHK 287 (308)
T ss_dssp HHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTT
T ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCcc
Confidence 9999999 66655444332222211 111100 11122 33459999999999999
Q ss_pred CCChHHHHcCcccCCC
Q 004987 352 RPKMGELLQSEFLNEP 367 (720)
Q Consensus 352 Rpta~eiL~hp~~~~~ 367 (720)
|||+.|+|+||||+..
T Consensus 288 R~t~~e~l~h~~~~~~ 303 (308)
T 3g33_A 288 RISAFRALQHSYLHKD 303 (308)
T ss_dssp SCCHHHHHTSTTC---
T ss_pred CCCHHHHhcCccccCC
Confidence 9999999999999875
No 26
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=1e-35 Score=313.21 Aligned_cols=211 Identities=16% Similarity=0.205 Sum_probs=162.7
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004987 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~gI 142 (720)
+..+|..++.+++||||+++++ ++.++. .+++||||.+++|.+++......+++.+++.++.||+.||.|||++||
T Consensus 47 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i 122 (292)
T 3o0g_A 47 SALREICLLKELKHKNIVRLHD-VLHSDK---KLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNV 122 (292)
T ss_dssp HHHHHHHHHTTCCCTTBCCEEE-EEEETT---EEEEEEECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHhcCCCCCEeeEEe-EEEeCC---EEEEEEecCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 3447888999999999999999 555543 679999997778888886655669999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004987 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.+||+|||.+...+....
T Consensus 123 vH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~---------------------------------------------- 156 (292)
T 3o0g_A 123 LHRDLKPQNLLINRNGELKLANFGLARAFGIPVR---------------------------------------------- 156 (292)
T ss_dssp ECCCCSGGGEEECTTSCEEECCCTTCEECCSCCS----------------------------------------------
T ss_pred ecCCCCHHHEEEcCCCCEEEeecccceecCCccc----------------------------------------------
Confidence 9999999999999999999999888743321100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC-CCccccchhhhhhh
Q 004987 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLL 301 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~-~s~~sDIwSLGvlL 301 (720)
......||+.|+|||++.+.. ++.++|||||||++
T Consensus 157 --------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il 192 (292)
T 3o0g_A 157 --------------------------------------------CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIF 192 (292)
T ss_dssp --------------------------------------------CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHH
T ss_pred --------------------------------------------cccCCccccCCcChHHHcCCCCcCchHHHHHHHHHH
Confidence 001146899999999998876 89999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhc--CCCCcc-------------------------c-cccCchHHHHHHHcCCCCCC
Q 004987 302 FELFC---PFSTGEEKTRTMSSLRH--RVLPPQ-------------------------L-LLKFPKEASFCLWLLHPEPS 350 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~i~~--~~~p~~-------------------------~-~~~~p~~~~Li~~~L~~dP~ 350 (720)
|||++ ||............+.. +..++. . ....+...+|+.+||++||+
T Consensus 193 ~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~ 272 (292)
T 3o0g_A 193 AELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPV 272 (292)
T ss_dssp HHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGG
T ss_pred HHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccccccccccccCCcchhhcccccChHHHHHHHHHhccChh
Confidence 99997 54443333233332221 000000 0 11223445999999999999
Q ss_pred CCCChHHHHcCcccCCC
Q 004987 351 GRPKMGELLQSEFLNEP 367 (720)
Q Consensus 351 ~Rpta~eiL~hp~~~~~ 367 (720)
+|||++|+|+||||+..
T Consensus 273 ~R~t~~e~l~hp~f~~~ 289 (292)
T 3o0g_A 273 QRISAEEALQHPYFSDF 289 (292)
T ss_dssp GSCCHHHHHTSGGGTTC
T ss_pred hCCCHHHHhcCcccccC
Confidence 99999999999999875
No 27
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=1.1e-35 Score=334.18 Aligned_cols=213 Identities=18% Similarity=0.208 Sum_probs=161.0
Q ss_pred eeeehhhhcccCCCCCceecccceeecCC---CCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004987 63 RKHSDGVELTHGDHLRNQGGLSGVCENEA---AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~---~~~~~~lV~E~~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs 139 (720)
+..+|..+|..++|||||++++ ++.... ....+|+||||.+++|.+.+.. .+++.+++.+++||+.||+|||+
T Consensus 107 ~~~~E~~~l~~l~hpnIv~l~~-~~~~~~~~~~~~~~~lv~E~~~~~l~~~~~~---~l~~~~~~~~~~qil~aL~~lH~ 182 (464)
T 3ttj_A 107 RAYRELVLMKCVNHKNIISLLN-VFTPQKTLEEFQDVYLVMELMDANLCQVIQM---ELDHERMSYLLYQMLCGIKHLHS 182 (464)
T ss_dssp HHHHHHHHHHHCCCTTBCCCSE-EECSCCSTTTCCEEEEEEECCSEEHHHHHTS---CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCCcEEE-EEccCCccccCCeEEEEEeCCCCCHHHHHhh---cCCHHHHHHHHHHHHHHHHHHHH
Confidence 4457888999999999999999 554332 2346899999977788888843 38999999999999999999999
Q ss_pred cCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004987 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||+||||||+|||++.++.+||+|||++...+...
T Consensus 183 ~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~-------------------------------------------- 218 (464)
T 3ttj_A 183 AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-------------------------------------------- 218 (464)
T ss_dssp TTCCCCCCCGGGEEECTTSCEEECCCCCC-----CC--------------------------------------------
T ss_pred CCcccCCCChHhEEEeCCCCEEEEEEEeeeecCCCc--------------------------------------------
Confidence 999999999999999999999999888874321110
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhh
Q 004987 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
.....+||++|+|||++.+..|+.++|||||||
T Consensus 219 -----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~ 251 (464)
T 3ttj_A 219 -----------------------------------------------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 251 (464)
T ss_dssp -----------------------------------------------CC----CCCTTCCHHHHTTCCCCTTHHHHHHHH
T ss_pred -----------------------------------------------ccCCCcccccccCHHHHcCCCCCHHHHHHHHHH
Confidence 001247899999999999999999999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhc-CCCCccc-----------------------ccc----------------Cch
Q 004987 300 LLFELFC---PFSTGEEKTRTMSSLRH-RVLPPQL-----------------------LLK----------------FPK 336 (720)
Q Consensus 300 lL~eLlt---pf~~~~~~~~~~~~i~~-~~~p~~~-----------------------~~~----------------~p~ 336 (720)
++|||++ ||.+..........+.. +..++.+ ... .+.
T Consensus 252 il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 331 (464)
T 3ttj_A 252 IMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQ 331 (464)
T ss_dssp HHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHH
T ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHH
Confidence 9999999 67665443322222111 1110000 000 123
Q ss_pred HHHHHHHcCCCCCCCCCChHHHHcCcccCCCccc
Q 004987 337 EASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 337 ~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
..+||.+||++||.+|||++|+|+||||+....+
T Consensus 332 ~~dLl~~mL~~dP~~R~ta~e~L~Hp~~~~~~~~ 365 (464)
T 3ttj_A 332 ARDLLSKMLVIDPAKRISVDDALQHPYINVWYDP 365 (464)
T ss_dssp HHHHHHHHSCSSTTTSCCHHHHHTSTTTGGGCCH
T ss_pred HHHHHHHHcCCChhhCCCHHHHhcChhhhhccCc
Confidence 4599999999999999999999999999976543
No 28
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.3e-35 Score=321.18 Aligned_cols=209 Identities=20% Similarity=0.323 Sum_probs=161.4
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004987 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~g 141 (720)
+..+|..+|.+++||||+++++ +++... .+|+|||| .|++|.+++...+ .+++.+++.++.||+.||.|||++|
T Consensus 54 ~~~~Ei~~l~~l~hpnIv~l~~-~~~~~~---~~~lv~E~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH~~g 128 (347)
T 3zgw_A 54 RIKTEIEALKNLRHQHICQLYH-VLETAN---KIFMVLEYCPGGELFDYIISQD-RLSEEETRVVFRQIVSAVAYVHSQG 128 (347)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEE-EEECSS---EEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCEeeEEE-EEEeCC---EEEEEEeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 4457888999999999999999 665543 57999999 7999999995443 4999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004987 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||++....... +.
T Consensus 129 ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~---------------------------------~~----------- 164 (347)
T 3zgw_A 129 YAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNK---------------------------------DY----------- 164 (347)
T ss_dssp CBCCCCCGGGEEECTTSCEEECCCTTCBC---------------------------------------------------
T ss_pred eEeCCccHHHEEEcCCCCEEEEeccCcccccCCC---------------------------------Cc-----------
Confidence 9999999999999999999999988874321110 00
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCC-Cccccchhhhhh
Q 004987 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYRLGVL 300 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~-s~~sDIwSLGvl 300 (720)
.....+||+.|+|||++.+..+ +.++|||||||+
T Consensus 165 ---------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~i 199 (347)
T 3zgw_A 165 ---------------------------------------------HLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGIL 199 (347)
T ss_dssp ----------------------------------------------------CGGGCCHHHHTTC---CCHHHHHHHHHH
T ss_pred ---------------------------------------------cccccCCccCccCHHHHcCCCCCCcHhHHHHHHHH
Confidence 0011478999999999998875 899999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004987 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 301 L~eLlt---pf~~~~~~~~~~~~i~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
+|+|++ ||...... .....+..+.++. .....+...+||.+||.+||.+|||+.|+|+||||...
T Consensus 200 l~ell~g~~Pf~~~~~~-~~~~~i~~~~~~~-p~~~s~~~~~li~~~L~~dP~~Rps~~eil~hp~~~~~ 267 (347)
T 3zgw_A 200 LYVLMCGFLPFDDDNVM-ALYKKIMRGKYDV-PKWLSPSSILLLQQMLQVDPKKRISMKNLLNHPWIMQD 267 (347)
T ss_dssp HHHHHHSSCSSCCSSHH-HHHHHHHHTCCCC-CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHTCHHHHTT
T ss_pred HHHHHHCCCCCCCCCHH-HHHHHHHcCCCCC-CCCCCHHHHHHHHHHcccCHhHCcCHHHHhcCcchhcC
Confidence 999999 66655443 3344444333221 11233455699999999999999999999999999875
No 29
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.6e-35 Score=321.34 Aligned_cols=213 Identities=16% Similarity=0.252 Sum_probs=164.5
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCC---CCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004987 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAA---IDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~---~~~~~lV~E~~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs 139 (720)
+..+|..+|.+++||||+++++ ++..... ...+|+||||.|++|.+++.. ..+++..++.++.||+.||.|||+
T Consensus 70 ~~~~E~~~l~~l~hpnIv~l~~-~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~--~~l~~~~~~~~~~qi~~~L~~LH~ 146 (367)
T 1cm8_A 70 RAYRELRLLKHMRHENVIGLLD-VFTPDETLDDFTDFYLVMPFMGTDLGKLMKH--EKLGEDRIQFLVYQMLKGLRYIHA 146 (367)
T ss_dssp HHHHHHHHHHHCCBTTBCCCSE-EECSCSSTTTCCCCEEEEECCSEEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCcCCCCcee-eEecCCccccCceEEEEEecCCCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH
Confidence 4458888999999999999999 5544322 245799999999999999965 349999999999999999999999
Q ss_pred cCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004987 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||+||||||+|||++.++.+||+|||+++..+..
T Consensus 147 ~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~--------------------------------------------- 181 (367)
T 1cm8_A 147 AGIIHRDLKPGNLAVNEDCELKILDFGLARQADSE--------------------------------------------- 181 (367)
T ss_dssp TTEECCCCCGGGEEECTTCCEEECCCTTCEECCSS---------------------------------------------
T ss_pred CCccccCcCHHHEEEcCCCCEEEEeeecccccccc---------------------------------------------
Confidence 99999999999999999999999888877322100
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-CCCCccccchhhh
Q 004987 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLG 298 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~~sDIwSLG 298 (720)
....+||++|+|||++.+ ..++.++||||||
T Consensus 182 ------------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG 213 (367)
T 1cm8_A 182 ------------------------------------------------MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVG 213 (367)
T ss_dssp ------------------------------------------------CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHH
T ss_pred ------------------------------------------------cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHH
Confidence 011468999999999987 5699999999999
Q ss_pred hhhhhccc---cCCCCchHHHHHHHhhc-CCCCc----------------------------cccccCchHHHHHHHcCC
Q 004987 299 VLLFELFC---PFSTGEEKTRTMSSLRH-RVLPP----------------------------QLLLKFPKEASFCLWLLH 346 (720)
Q Consensus 299 vlL~eLlt---pf~~~~~~~~~~~~i~~-~~~p~----------------------------~~~~~~p~~~~Li~~~L~ 346 (720)
|++|||++ ||.+..........+.. +..+. .+....+...+|+.+||+
T Consensus 214 ~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~ 293 (367)
T 1cm8_A 214 CIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLV 293 (367)
T ss_dssp HHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSC
T ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHcc
Confidence 99999999 67655443222221111 11111 111223455699999999
Q ss_pred CCCCCCCChHHHHcCcccCCCccch
Q 004987 347 PEPSGRPKMGELLQSEFLNEPRDSM 371 (720)
Q Consensus 347 ~dP~~Rpta~eiL~hp~~~~~~~~l 371 (720)
.||.+|||+.|+|+||||+......
T Consensus 294 ~dP~~R~t~~e~l~hp~f~~~~~~~ 318 (367)
T 1cm8_A 294 LDAEQRVTAGEALAHPYFESLHDTE 318 (367)
T ss_dssp SSTTTSCCHHHHHHSGGGTTTC---
T ss_pred CChhHCCCHHHHhcChHHHhhcCCc
Confidence 9999999999999999999876543
No 30
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=4.5e-35 Score=311.85 Aligned_cols=211 Identities=16% Similarity=0.208 Sum_probs=163.2
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004987 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~gIv 143 (720)
..+|..+|.+++|||||++++ ++.++. .+++||||.+++|.+++......+++.+++.++.||+.||.|||++||+
T Consensus 66 ~~~E~~~l~~l~hp~iv~~~~-~~~~~~---~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~iv 141 (311)
T 3niz_A 66 AIREISLLKELHHPNIVSLID-VIHSER---CLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRIL 141 (311)
T ss_dssp HHHHHHHHHHCCCTTBCCEEE-EECCSS---CEEEEEECCSEEHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHHHcCCCCEeeeee-EEccCC---EEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 347888999999999999999 555443 6799999966799999977666799999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004987 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.+||+|||.+...+....
T Consensus 142 H~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~----------------------------------------------- 174 (311)
T 3niz_A 142 HRDLKPQNLLINSDGALKLADFGLARAFGIPVR----------------------------------------------- 174 (311)
T ss_dssp CCCCCGGGEEECTTCCEEECCCTTCEETTSCCC-----------------------------------------------
T ss_pred cCCCchHhEEECCCCCEEEccCcCceecCCCcc-----------------------------------------------
Confidence 999999999999999999999888743321100
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-CCCccccchhhhhhhh
Q 004987 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLF 302 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~~sDIwSLGvlL~ 302 (720)
......||+.|+|||++.+. .++.++|||||||++|
T Consensus 175 -------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ 211 (311)
T 3niz_A 175 -------------------------------------------SYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFA 211 (311)
T ss_dssp ----------------------------------------------CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHH
T ss_pred -------------------------------------------cccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHH
Confidence 00113679999999999874 5899999999999999
Q ss_pred hccc---cCCCCchHHH--HHHHhhcCCCCccc--------------------------cccCchHHHHHHHcCCCCCCC
Q 004987 303 ELFC---PFSTGEEKTR--TMSSLRHRVLPPQL--------------------------LLKFPKEASFCLWLLHPEPSG 351 (720)
Q Consensus 303 eLlt---pf~~~~~~~~--~~~~i~~~~~p~~~--------------------------~~~~p~~~~Li~~~L~~dP~~ 351 (720)
+|++ ||........ .+..+.....+..+ ....+...+||.+||++||.+
T Consensus 212 ~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~ 291 (311)
T 3niz_A 212 EMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNK 291 (311)
T ss_dssp HHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTT
T ss_pred HHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhH
Confidence 9999 6655433221 11111111111110 112234459999999999999
Q ss_pred CCChHHHHcCcccCCCc
Q 004987 352 RPKMGELLQSEFLNEPR 368 (720)
Q Consensus 352 Rpta~eiL~hp~~~~~~ 368 (720)
|||+.|+|+||||+...
T Consensus 292 Rpt~~ell~hp~f~~~~ 308 (311)
T 3niz_A 292 RISARDAMNHPYFKDLD 308 (311)
T ss_dssp SCCHHHHHTSGGGTTSC
T ss_pred CCCHHHHhcCcccccCC
Confidence 99999999999999864
No 31
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.5e-35 Score=317.16 Aligned_cols=208 Identities=19% Similarity=0.251 Sum_probs=166.9
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004987 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~gIv 143 (720)
.+|..+|..++||||+++++ ++++.. .+|+|||| .|++|.+++......+++.+++.++.||+.||.|||++||+
T Consensus 49 ~~E~~~l~~l~hpnIv~~~~-~~~~~~---~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~giv 124 (321)
T 1tki_A 49 KKEISILNIARHRNILHLHE-SFESME---ELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIG 124 (321)
T ss_dssp HHHHHHHHHSCCTTBCCEEE-EEEETT---EEEEEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHhCCCCCCCeEeE-EEecCC---EEEEEEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 36788999999999999999 555543 67999999 88999999976666699999999999999999999999999
Q ss_pred eccCCCCcEEEcc--CCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004987 144 VHNVRPSCFVMSS--FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 144 HrDLKP~NILl~~--~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
||||||+|||++. ++.+||+|||.+.......
T Consensus 125 H~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~---------------------------------------------- 158 (321)
T 1tki_A 125 HFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD---------------------------------------------- 158 (321)
T ss_dssp CCCCCGGGEEESSSSCCCEEECCCTTCEECCTTC----------------------------------------------
T ss_pred cCCCCHHHEEEccCCCCCEEEEECCCCeECCCCC----------------------------------------------
Confidence 9999999999986 7899998888773321100
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004987 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGvlL 301 (720)
......||+.|+|||++.+..++.++|||||||++
T Consensus 159 ---------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il 193 (321)
T 1tki_A 159 ---------------------------------------------NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLV 193 (321)
T ss_dssp ---------------------------------------------EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHH
T ss_pred ---------------------------------------------ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHH
Confidence 00114689999999999998899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCC--CccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004987 302 FELFC---PFSTGEEKTRTMSSLRHRVL--PPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~i~~~~~--p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
|+|++ ||...... ..+..+..... ++...... +...+|+.+||++||.+|||+.|+|+||||+...
T Consensus 194 ~~ll~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~hp~~~~~~ 265 (321)
T 1tki_A 194 YVLLSGINPFLAETNQ-QIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQKI 265 (321)
T ss_dssp HHHHHSSCTTCCSSHH-HHHHHHHHTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHSCG
T ss_pred HHHHhCCCCCcCCCHH-HHHHHHHcCCCCCChhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhcChhhccCc
Confidence 99999 66655444 33444443332 22223333 4455999999999999999999999999998763
No 32
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=2.2e-35 Score=315.62 Aligned_cols=201 Identities=14% Similarity=0.181 Sum_probs=163.6
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004987 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~gIvH 144 (720)
+|..+|..++||||+++++ ++.+.. .+|+|||| .|++|.+++.... .+++..++.++.||+.||.|||++||+|
T Consensus 55 ~E~~~l~~l~hp~Iv~~~~-~~~~~~---~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~ivH 129 (318)
T 1fot_A 55 DERLMLSIVTHPFIIRMWG-TFQDAQ---QIFMIMDYIEGGELFSLLRKSQ-RFPNPVAKFYAAEVCLALEYLHSKDIIY 129 (318)
T ss_dssp HHHHHHHSCCBTTBCCEEE-EEECSS---EEEEEECCCCSCBHHHHHHHTS-SCCHHHHHHHHHHHHHHHHHHHTTTEEC
T ss_pred HHHHHHhhCCCCCCceEeE-EEEeCC---EEEEEEeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 5777899999999999999 565543 67999999 8999999996543 4999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004987 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+|||++.+|++||+|||++......
T Consensus 130 rDlkp~NIll~~~g~~kL~Dfg~a~~~~~~-------------------------------------------------- 159 (318)
T 1fot_A 130 RDLKPENILLDKNGHIKITDFGFAKYVPDV-------------------------------------------------- 159 (318)
T ss_dssp CCCCGGGEEECTTSCEEECCCSSCEECSSC--------------------------------------------------
T ss_pred cCCChheEEEcCCCCEEEeecCcceecCCc--------------------------------------------------
Confidence 999999999999999999888877321100
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhc
Q 004987 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 304 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGvlL~eL 304 (720)
....+||+.|+|||++.+..++.++|||||||++|||
T Consensus 160 -------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el 196 (318)
T 1fot_A 160 -------------------------------------------TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEM 196 (318)
T ss_dssp -------------------------------------------BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHH
T ss_pred -------------------------------------------cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHH
Confidence 0014789999999999999999999999999999999
Q ss_pred cc---cCCCCchHHHHHHHhhcCCCCccccc-cCchHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC
Q 004987 305 FC---PFSTGEEKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 367 (720)
Q Consensus 305 lt---pf~~~~~~~~~~~~i~~~~~p~~~~~-~~p~~~~Li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~ 367 (720)
++ ||...... ..+..+....+. ++. ..+...+||.+||..||.+|| +++++++||||+..
T Consensus 197 l~g~~pf~~~~~~-~~~~~i~~~~~~--~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~hp~f~~~ 265 (318)
T 1fot_A 197 LAGYTPFYDSNTM-KTYEKILNAELR--FPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEV 265 (318)
T ss_dssp HHSSCTTCCSSHH-HHHHHHHHCCCC--CCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGGSSC
T ss_pred HhCCCCCCCCCHH-HHHHHHHhCCCC--CCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcCccccCC
Confidence 99 66655443 333334333221 112 234456999999999999999 89999999999976
No 33
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=3.1e-35 Score=317.01 Aligned_cols=206 Identities=18% Similarity=0.261 Sum_probs=164.9
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004987 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~gI 142 (720)
..+|..+|..++||||+++++ ++.+.. .+|+|||| .|++|.+++.+. ..+++..++.++.||+.||.|||++||
T Consensus 52 ~~~E~~~l~~l~hp~iv~l~~-~~~~~~---~~~lv~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~i 126 (337)
T 1o6l_A 52 TVTESRVLQNTRHPFLTALKY-AFQTHD---RLCFVMEYANGGELFFHLSRE-RVFTEERARFYGAEIVSALEYLHSRDV 126 (337)
T ss_dssp HHHHHHHHHSCCCTTBCCEEE-EEECSS---EEEEEEECCTTCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhCCCCcCcceEE-EEEeCC---EEEEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 346777899999999999999 565543 67999999 899999999544 349999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004987 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.+|++||+|||+++.......
T Consensus 127 vHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~---------------------------------------------- 160 (337)
T 1o6l_A 127 VYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA---------------------------------------------- 160 (337)
T ss_dssp BCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTC----------------------------------------------
T ss_pred ecCcCCHHHEEECCCCCEEEeeccchhhcccCCC----------------------------------------------
Confidence 9999999999999999999998888743211000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004987 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGvlL~ 302 (720)
.....+||+.|+|||++.+..++.++|||||||++|
T Consensus 161 --------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ 196 (337)
T 1o6l_A 161 --------------------------------------------TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMY 196 (337)
T ss_dssp --------------------------------------------CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHH
T ss_pred --------------------------------------------cccccccChhhCChhhhcCCCCCchhhcccchhHHH
Confidence 001147899999999999989999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCCCccccc-cCchHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC
Q 004987 303 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 367 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~i~~~~~p~~~~~-~~p~~~~Li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~ 367 (720)
||++ ||...... .....+....+. ++. ..+...+||.+||+.||.+|| ++.||++||||...
T Consensus 197 ell~g~~Pf~~~~~~-~~~~~i~~~~~~--~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h~~f~~~ 267 (337)
T 1o6l_A 197 EMMCGRLPFYNQDHE-RLFELILMEEIR--FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSI 267 (337)
T ss_dssp HHHHSSCSSCCSSHH-HHHHHHHHCCCC--CCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTC
T ss_pred HHhcCCCCCCCCCHH-HHHHHHHcCCCC--CCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcCCCcCCC
Confidence 9999 67655443 333333332211 112 234556999999999999999 89999999999876
No 34
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=5.4e-35 Score=313.47 Aligned_cols=207 Identities=18% Similarity=0.266 Sum_probs=164.6
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004987 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~gI 142 (720)
..+|..+|.+++||||+++++ ++.... .+|+|||| .|++|.+++... ..+++.+++.++.||+.||.|||++||
T Consensus 61 ~~~E~~~l~~l~hp~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~al~~lH~~~i 135 (326)
T 2y0a_A 61 IEREVSILKEIQHPNVITLHE-VYENKT---DVILILELVAGGELFDFLAEK-ESLTEEEATEFLKQILNGVYYLHSLQI 135 (326)
T ss_dssp HHHHHHHHHHCCCTTBCCEEE-EEECSS---EEEEEEECCCSCBHHHHHTTS-SCCBHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHhCCCCCCCcEEE-EEEeCC---EEEEEEEcCCCCCHHHHHHhc-CCcCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 347888999999999999999 555543 57999999 799999999544 459999999999999999999999999
Q ss_pred eeccCCCCcEEEccCC----ceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCC
Q 004987 143 VVHNVRPSCFVMSSFN----HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 143 vHrDLKP~NILl~~~~----~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~ 218 (720)
+||||||+|||++.++ .+||+|||++.......
T Consensus 136 vH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~------------------------------------------- 172 (326)
T 2y0a_A 136 AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN------------------------------------------- 172 (326)
T ss_dssp ECCCCCGGGEEESCSSSSSCCEEECCCTTCEECCTTS-------------------------------------------
T ss_pred EcCCCCHHHEEEecCCCCCCCEEEEECCCCeECCCCC-------------------------------------------
Confidence 9999999999998877 79998888773321100
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhh
Q 004987 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
......||+.|+|||++.+..++.++||||||
T Consensus 173 ------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG 204 (326)
T 2y0a_A 173 ------------------------------------------------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIG 204 (326)
T ss_dssp ------------------------------------------------CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHH
T ss_pred ------------------------------------------------ccccccCCcCcCCceeecCCCCCcHHHHHHHH
Confidence 00114689999999999988899999999999
Q ss_pred hhhhhccc---cCCCCchHHHHHHHhhc--CCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004987 299 VLLFELFC---PFSTGEEKTRTMSSLRH--RVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 299 vlL~eLlt---pf~~~~~~~~~~~~i~~--~~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|++|+|++ ||...... ..+..+.. ..+++......+ ...+||.+||++||.+|||+.|+|+||||+..
T Consensus 205 ~il~~ll~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~ 278 (326)
T 2y0a_A 205 VITYILLSGASPFLGDTKQ-ETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPK 278 (326)
T ss_dssp HHHHHHHHSCCSSCCSSHH-HHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHSTTTSCC
T ss_pred HHHHHHHHCcCCCCCCCHH-HHHHHHHhcCCCcCccccccCCHHHHHHHHHHccCChhhCCCHHHHhcCCCccCC
Confidence 99999999 66554443 23333332 223333333344 44599999999999999999999999999875
No 35
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.5e-35 Score=325.27 Aligned_cols=235 Identities=16% Similarity=0.199 Sum_probs=166.3
Q ss_pred eeeehhhhcccCC-CCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004987 63 RKHSDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~-HpnIV~l~~~~~~~~~~~~~~~lV~E~~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~g 141 (720)
+..+|..+|.++. |||||++++ ++.... ...+|+||||.+++|.+++... .+++..+..++.||+.||.|||++|
T Consensus 54 ~~~~E~~~l~~l~~h~niv~l~~-~~~~~~-~~~~~lv~e~~~~~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH~~~ 129 (388)
T 3oz6_A 54 RTFREIMILTELSGHENIVNLLN-VLRADN-DRDVYLVFDYMETDLHAVIRAN--ILEPVHKQYVVYQLIKVIKYLHSGG 129 (388)
T ss_dssp HHHHHHHHHHHTTTCTTBCCEEE-EEECTT-SSCEEEEEECCSEEHHHHHHHT--CCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhccCCCCCCeeee-EEecCC-CCEEEEEecccCcCHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 4457888999987 999999999 554332 2368999999778999999653 4999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004987 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||+++.......... ..
T Consensus 130 ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~-----------------------------~~----------- 169 (388)
T 3oz6_A 130 LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTN-----------------------------NI----------- 169 (388)
T ss_dssp EECCCCCGGGEEECTTCCEEECCCTTCEESSSCCCCCC-----------------------------CG-----------
T ss_pred EEeCCCCHHHeEEcCCCCEEecCCcccccccccccccc-----------------------------cc-----------
Confidence 99999999999999999999999999865422110000 00
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-CCCCccccchhhhhh
Q 004987 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVL 300 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~~sDIwSLGvl 300 (720)
+.......... ..........+||++|+|||++.+ ..++.++|||||||+
T Consensus 170 ---------------~~~~~~~~~~~--------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~i 220 (388)
T 3oz6_A 170 ---------------PLSINENTENF--------------DDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCI 220 (388)
T ss_dssp ---------------GGCCC-----------------------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHH
T ss_pred ---------------ccccccccccc--------------ccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHH
Confidence 00000000000 000001123589999999999987 558999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCcc--------------------------------c-------------cc
Q 004987 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQ--------------------------------L-------------LL 332 (720)
Q Consensus 301 L~eLlt---pf~~~~~~~~~~~~i~~~~~p~~--------------------------------~-------------~~ 332 (720)
+|||++ ||.+..........+.....|+. + ..
T Consensus 221 l~ell~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (388)
T 3oz6_A 221 LGEILCGKPIFPGSSTMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKAD 300 (388)
T ss_dssp HHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCC
T ss_pred HHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhccccccccc
Confidence 999999 67665444332222211111110 0 02
Q ss_pred cCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCccc
Q 004987 333 KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 333 ~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
..+...+||.+||+.||.+|||+.|+|+||||+....+
T Consensus 301 ~~~~~~dll~~~L~~dP~~R~t~~e~l~Hp~~~~~~~~ 338 (388)
T 3oz6_A 301 CNEEALDLLDKLLQFNPNKRISANDALKHPFVSIFHNP 338 (388)
T ss_dssp CCHHHHHHHHHHCCSSGGGSCCHHHHTTSTTTTTTCCG
T ss_pred CCHHHHHHHHHhhccCcccCCCHHHHhCCHHHHHhcCC
Confidence 23455699999999999999999999999999876544
No 36
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=3.4e-35 Score=319.84 Aligned_cols=208 Identities=19% Similarity=0.223 Sum_probs=164.4
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004987 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~g 141 (720)
+..+|..++.+++|||||++++ ++.+.. .+|+|||| .|++|.+++... ..+++.+++.++.||+.||.|||++|
T Consensus 74 ~~~~E~~il~~l~hpnIv~~~~-~~~~~~---~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~al~~lH~~~ 148 (362)
T 2bdw_A 74 KLEREARICRKLQHPNIVRLHD-SIQEES---FHYLVFDLVTGGELFEDIVAR-EFYSEADASHCIQQILESIAYCHSNG 148 (362)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EEECSS---EEEEEECCCCSCBHHHHHTTC-SCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCCCeEEE-EEEeCC---EEEEEEecCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3447888999999999999999 555543 57999999 889999999544 35999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCC---ceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCC
Q 004987 142 IVVHNVRPSCFVMSSFN---HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~---~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~ 218 (720)
|+||||||+|||++.++ .+||+|||++.......
T Consensus 149 ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~------------------------------------------- 185 (362)
T 2bdw_A 149 IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE------------------------------------------- 185 (362)
T ss_dssp CBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTCC-------------------------------------------
T ss_pred eEeccCchHHEEEecCCCCCCEEEeecCcceEecCCc-------------------------------------------
Confidence 99999999999998654 59998888774321110
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhh
Q 004987 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
......||+.|+|||++.+..++.++||||||
T Consensus 186 ------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG 217 (362)
T 2bdw_A 186 ------------------------------------------------AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACG 217 (362)
T ss_dssp ------------------------------------------------SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHH
T ss_pred ------------------------------------------------ccccCCCCccccCHHHHccCCCCchhhHHHHH
Confidence 00114689999999999998899999999999
Q ss_pred hhhhhccc---cCCCCchHHHHHHHhhcCC--CCcccc-ccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004987 299 VLLFELFC---PFSTGEEKTRTMSSLRHRV--LPPQLL-LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 299 vlL~eLlt---pf~~~~~~~~~~~~i~~~~--~p~~~~-~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|++|+|++ ||...... .....+..+. ++.... ...+...+||.+||++||.+|||+.|+|+||||...
T Consensus 218 ~il~~ll~g~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~ 291 (362)
T 2bdw_A 218 VILYILLVGYPPFWDEDQH-RLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNR 291 (362)
T ss_dssp HHHHHHHHSSCSSCCSSHH-HHHHHHHHTCCCCCTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTSHHHHTH
T ss_pred HHHHHHHHCCCCCCCCCHH-HHHHHHHhCCCCCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcccCCC
Confidence 99999999 66554443 3444444332 232222 334455699999999999999999999999999763
No 37
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=4.6e-35 Score=307.81 Aligned_cols=209 Identities=17% Similarity=0.242 Sum_probs=159.8
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004987 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~gIvH 144 (720)
.+|..++.+++||||+++++ ++.... .+|+||||.+++|.+++......+++.+++.++.||+.||.|||++||+|
T Consensus 48 ~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H 123 (288)
T 1ob3_A 48 IREISILKELKHSNIVKLYD-VIHTKK---RLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLH 123 (288)
T ss_dssp HHHHHGGGGCCCTTBCCEEE-EEECSS---CEEEEEECCSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHhcCCCCEeeeee-EEccCC---eEEEEEEecCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 37888999999999999999 555443 67999999667999999766566999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004987 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+|||++.++.+||+|||.+...+....
T Consensus 124 ~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~------------------------------------------------ 155 (288)
T 1ob3_A 124 RDLKPQNLLINREGELKIADFGLARAFGIPVR------------------------------------------------ 155 (288)
T ss_dssp SCCCGGGEEECTTSCEEECCTTHHHHHCC---------------------------------------------------
T ss_pred CCCCHHHEEEcCCCCEEEeECccccccCcccc------------------------------------------------
Confidence 99999999999999999998888733211100
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC-CCccccchhhhhhhhh
Q 004987 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFE 303 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~-~s~~sDIwSLGvlL~e 303 (720)
......||+.|+|||++.+.. ++.++|||||||++||
T Consensus 156 ------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ 193 (288)
T 1ob3_A 156 ------------------------------------------KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAE 193 (288)
T ss_dssp ------------------------------------------------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHH
T ss_pred ------------------------------------------ccccccccccccCchheeCCCCCCcHHHHHHHHHHHHH
Confidence 001136799999999997754 8999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhc--CCC-------------Cc-----------cccccC-chHHHHHHHcCCCCCCCCC
Q 004987 304 LFC---PFSTGEEKTRTMSSLRH--RVL-------------PP-----------QLLLKF-PKEASFCLWLLHPEPSGRP 353 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~i~~--~~~-------------p~-----------~~~~~~-p~~~~Li~~~L~~dP~~Rp 353 (720)
|++ ||............... ... .+ .+.... +...+||.+||++||++||
T Consensus 194 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp 273 (288)
T 1ob3_A 194 MVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRI 273 (288)
T ss_dssp HHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSC
T ss_pred HHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCC
Confidence 999 66655444333222211 000 00 011122 3345999999999999999
Q ss_pred ChHHHHcCcccCCC
Q 004987 354 KMGELLQSEFLNEP 367 (720)
Q Consensus 354 ta~eiL~hp~~~~~ 367 (720)
|+.|+|+||||++.
T Consensus 274 t~~e~l~hp~f~~~ 287 (288)
T 1ob3_A 274 TAKQALEHAYFKEN 287 (288)
T ss_dssp CHHHHHTSGGGGC-
T ss_pred CHHHHhcCcchhhc
Confidence 99999999999863
No 38
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=8.1e-36 Score=323.65 Aligned_cols=205 Identities=16% Similarity=0.265 Sum_probs=161.8
Q ss_pred ehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004987 66 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~gIv 143 (720)
+|..+|..+ +|||||++++ ++.+.. .+|+|||| .|++|.+++.+.. .+++.+++.++.||+.||.|||++||+
T Consensus 72 ~E~~il~~~~~hp~Iv~l~~-~~~~~~---~~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~giv 146 (353)
T 3txo_A 72 TEKRILSLARNHPFLTQLFC-CFQTPD---RLFFVMEFVNGGDLMFHIQKSR-RFDEARARFYAAEIISALMFLHDKGII 146 (353)
T ss_dssp HHHHHHHHTTTCTTBCCEEE-EEECSS---EEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTCB
T ss_pred HHHHHHHhccCCCceeeEEE-EEEeCC---EEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCCc
Confidence 566677776 7999999999 665554 57999999 8999999995543 499999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004987 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.+|++||+|||+++......
T Consensus 147 HrDlkp~NILl~~~g~ikL~DFG~a~~~~~~~------------------------------------------------ 178 (353)
T 3txo_A 147 YRDLKLDNVLLDHEGHCKLADFGMCKEGICNG------------------------------------------------ 178 (353)
T ss_dssp CCCCCGGGEEECTTSCEEECCCTTCBCSCC--------------------------------------------------
T ss_pred ccCCCHHHEEECCCCCEEEccccceeecccCC------------------------------------------------
Confidence 99999999999999999999888874311100
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004987 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGvlL~e 303 (720)
......+||+.|+|||++.+..++.++|||||||++||
T Consensus 179 ------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e 216 (353)
T 3txo_A 179 ------------------------------------------VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYE 216 (353)
T ss_dssp -------------------------------------------------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHH
T ss_pred ------------------------------------------ccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHH
Confidence 00012478999999999998889999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCCh------HHHHcCcccCCC
Q 004987 304 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM------GELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~i~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta------~eiL~hp~~~~~ 367 (720)
|++ ||...... ..+..+....+... ....+...+||.+||++||.+||++ .||++||||+..
T Consensus 217 ll~G~~Pf~~~~~~-~~~~~i~~~~~~~p-~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~hp~f~~~ 287 (353)
T 3txo_A 217 MLCGHAPFEAENED-DLFEAILNDEVVYP-TWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKEI 287 (353)
T ss_dssp HHHSSCSSCCSSHH-HHHHHHHHCCCCCC-TTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTSGGGTTC
T ss_pred HHhCCCCCCCCCHH-HHHHHHHcCCCCCC-CCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhCCcccCC
Confidence 999 77665544 34444443322111 1133455699999999999999998 899999999986
No 39
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=2.9e-35 Score=330.24 Aligned_cols=244 Identities=16% Similarity=0.200 Sum_probs=162.8
Q ss_pred eeeehhhhcccCCCCCceecccceeecC-CCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004987 63 RKHSDGVELTHGDHLRNQGGLSGVCENE-AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~-~~~~~~~lV~E~~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~g 141 (720)
+..+|..+|.+++|||||++++.+.... .....+|+||||.+++|.+++... ..+++..++.|++||+.||.|||++|
T Consensus 98 ~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~~ 176 (458)
T 3rp9_A 98 RILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTP-VYLTELHIKTLLYNLLVGVKYVHSAG 176 (458)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEECCCSEEHHHHHHSS-CCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCCCceEEEEecCCcccCceEEEEEeccccchhhhcccC-CCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 4447888999999999999999443222 334578999999889999999654 35999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004987 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
||||||||+|||++.++.+||+|||+++............. ... ......+.+|+...
T Consensus 177 iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~--------~~~-------~~~~~~~~~~~~~~------- 234 (458)
T 3rp9_A 177 ILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLP--------ISP-------REDDMNLVTFPHTK------- 234 (458)
T ss_dssp CBCCCCCGGGEEECTTCCEEECCCTTCBCTTSCTTCCCCCC---------------------------------------
T ss_pred cCCCCCChhhEEECCCCCEeecccccchhccCccccccccc--------cCc-------cccccccccccccc-------
Confidence 99999999999999999999999999976543311100000 000 00000001110000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccc-cCCCCCccccchhhhhh
Q 004987 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEEL-AGAPVSCASDIYRLGVL 300 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l-~~~~~s~~sDIwSLGvl 300 (720)
......+..+||++|+|||++ .+..|+.++|||||||+
T Consensus 235 -----------------------------------------~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~i 273 (458)
T 3rp9_A 235 -----------------------------------------NLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCI 273 (458)
T ss_dssp ---------------------------------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHH
T ss_pred -----------------------------------------cccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHH
Confidence 000011236899999999986 45569999999999999
Q ss_pred hhhccc--------------cCCCCch-------------------HHHHHHHhhc--CC--------------------
Q 004987 301 LFELFC--------------PFSTGEE-------------------KTRTMSSLRH--RV-------------------- 325 (720)
Q Consensus 301 L~eLlt--------------pf~~~~~-------------------~~~~~~~i~~--~~-------------------- 325 (720)
||||++ +|.+... ....+..+.. +.
T Consensus 274 l~elltg~~~~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~ 353 (458)
T 3rp9_A 274 FAELLNMIKENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRI 353 (458)
T ss_dssp HHHHHTTSTTTCSSGGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTT
T ss_pred HHHHHHhccccccccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHh
Confidence 999996 1221110 0000110000 00
Q ss_pred C--------CccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCccc
Q 004987 326 L--------PPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 326 ~--------p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
+ ...+....+...+||.+||.+||.+|||++|+|+||||+.....
T Consensus 354 ~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~Hp~f~~~~~~ 406 (458)
T 3rp9_A 354 FPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEVRIA 406 (458)
T ss_dssp SCCCCCCCGGGGSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTCCG
T ss_pred cCCCCCCCHHHHCCCCCHHHHHHHHHHhccCccccCCHHHHhcCHhhhhcCCC
Confidence 0 01112234555699999999999999999999999999987553
No 40
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=1.2e-34 Score=313.43 Aligned_cols=220 Identities=15% Similarity=0.212 Sum_probs=166.1
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCC-----CCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHH
Q 004987 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAA-----IDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAA 137 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~-----~~~~~lV~E~~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~L 137 (720)
+..+|..+|..++||||+++++ ++..... ...+|+||||.+++|.+.+......+++.+++.++.||+.||.||
T Consensus 62 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~L 140 (351)
T 3mi9_A 62 TALREIKILQLLKHENVVNLIE-ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYI 140 (351)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EEEEC--------CEEEEEEECCSEEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCCcccHhh-eeeccccccccCCceEEEEEeccCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHH
Confidence 3447888999999999999999 5544321 346899999977799999977666799999999999999999999
Q ss_pred HHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCC
Q 004987 138 HSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 138 Hs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~ 217 (720)
|++||+||||||+|||++.++.+||+|||++.........
T Consensus 141 H~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~---------------------------------------- 180 (351)
T 3mi9_A 141 HRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNS---------------------------------------- 180 (351)
T ss_dssp HHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCCCSSS----------------------------------------
T ss_pred HHCCeeCCCCCHHHEEEcCCCCEEEccchhcccccccccc----------------------------------------
Confidence 9999999999999999999999999999988543211000
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-CCCccccchh
Q 004987 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYR 296 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~~sDIwS 296 (720)
.+.......||+.|+|||++.+. .++.++||||
T Consensus 181 ----------------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Diws 214 (351)
T 3mi9_A 181 ----------------------------------------------QPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWG 214 (351)
T ss_dssp ----------------------------------------------SCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHH
T ss_pred ----------------------------------------------cccccCCcccccCccCchhhcCCCCCCcHhHHHH
Confidence 00000124789999999999874 4899999999
Q ss_pred hhhhhhhccc---cCCCCchHHHH--HHHhhcCCCCcccccc-----------------------------CchHHHHHH
Q 004987 297 LGVLLFELFC---PFSTGEEKTRT--MSSLRHRVLPPQLLLK-----------------------------FPKEASFCL 342 (720)
Q Consensus 297 LGvlL~eLlt---pf~~~~~~~~~--~~~i~~~~~p~~~~~~-----------------------------~p~~~~Li~ 342 (720)
|||++|||++ ||......... +..+. +.+++..... .+...+||.
T Consensus 215 lG~il~ell~g~~pf~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 293 (351)
T 3mi9_A 215 AGCIMAEMWTRSPIMQGNTEQHQLALISQLC-GSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLID 293 (351)
T ss_dssp HHHHHHHHHHSSCSCCCSSHHHHHHHHHHHH-CCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCCCChHHHHHHHHHHh-CCCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHH
Confidence 9999999999 56554433221 22222 2222221111 234569999
Q ss_pred HcCCCCCCCCCChHHHHcCcccCCCccc
Q 004987 343 WLLHPEPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 343 ~~L~~dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
+||++||.+|||+.|+|+||||.....+
T Consensus 294 ~~L~~dP~~R~t~~e~l~hp~f~~~~~~ 321 (351)
T 3mi9_A 294 KLLVLDPAQRIDSDDALNHDFFWSDPMP 321 (351)
T ss_dssp HHSCSSGGGSCCHHHHHTSGGGGSSSCC
T ss_pred HHhcCChhhCCCHHHHhCCCCcCCCCCc
Confidence 9999999999999999999999876443
No 41
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=6.1e-35 Score=306.79 Aligned_cols=210 Identities=13% Similarity=0.141 Sum_probs=170.0
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-
Q 004987 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG- 141 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~g- 141 (720)
..+|..+|.+++||||+++++.+.........+++|||| .+++|.+++... ..+++..++.++.||+.||.|||++|
T Consensus 72 ~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~~ 150 (290)
T 1t4h_A 72 FKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRF-KVMKIKVLRSWCRQILKGLQFLHTRTP 150 (290)
T ss_dssp HHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHTSSS
T ss_pred HHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEEEEecCCCCHHHHHHHc-cCCCHHHHHHHHHHHHHHHHHHHcCCC
Confidence 347888999999999999999444444444568999999 799999999553 34999999999999999999999999
Q ss_pred -ceeccCCCCcEEEc-cCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004987 142 -IVVHNVRPSCFVMS-SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 142 -IvHrDLKP~NILl~-~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
|+||||||+|||++ .++.++|+|||.+......
T Consensus 151 ~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~~--------------------------------------------- 185 (290)
T 1t4h_A 151 PIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS--------------------------------------------- 185 (290)
T ss_dssp CCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTT---------------------------------------------
T ss_pred CEEECCCCHHHEEEECCCCCEEEeeCCCccccccc---------------------------------------------
Confidence 99999999999998 7889999888876321110
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhh
Q 004987 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
......||+.|+|||++.+. ++.++|||||||
T Consensus 186 -----------------------------------------------~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~ 217 (290)
T 1t4h_A 186 -----------------------------------------------FAKAVIGTPEFMAPEMYEEK-YDESVDVYAFGM 217 (290)
T ss_dssp -----------------------------------------------SBEESCSSCCCCCGGGGGTC-CCTHHHHHHHHH
T ss_pred -----------------------------------------------ccccccCCcCcCCHHHHhcc-CCCcchHHHHHH
Confidence 00114689999999998754 899999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004987 300 LLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 300 lL~eLlt---pf~~~~~~~~~~~~i~~~~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
++|+|++ ||............+.....+..+....+ ...+||.+||+.||.+|||+.|+|+||||++.
T Consensus 218 ~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~f~~~ 289 (290)
T 1t4h_A 218 CMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQEE 289 (290)
T ss_dssp HHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC--
T ss_pred HHHHHHhCCCCCCCcCcHHHHHHHHhccCCccccCCCCCHHHHHHHHHHccCChhhCCCHHHHhhCcccccC
Confidence 9999999 77765666566666666666666655554 45699999999999999999999999999864
No 42
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=5.8e-35 Score=326.38 Aligned_cols=207 Identities=18% Similarity=0.221 Sum_probs=165.1
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004987 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~gI 142 (720)
..+|..++.+++|||||++++ ++.+.. .+|+|||| .|++|.+++.... .+++.++..++.||+.||.|||++||
T Consensus 57 ~~~E~~il~~l~hpnIv~l~~-~~~~~~---~~~lv~E~~~gg~L~~~i~~~~-~~~e~~~~~i~~qil~aL~~lH~~gi 131 (444)
T 3soa_A 57 LEREARICRLLKHPNIVRLHD-SISEEG---HHYLIFDLVTGGELFEDIVARE-YYSEADASHCIQQILEAVLHCHQMGV 131 (444)
T ss_dssp HHHHHHHHHHCCBTTBCCEEE-EEECSS---EEEEEECCCBCCBHHHHHHHCS-CCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhCCCcCCCeEEE-EEEECC---EEEEEEEeCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 447888999999999999999 565543 67999999 8999999995543 49999999999999999999999999
Q ss_pred eeccCCCCcEEEc---cCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004987 143 VVHNVRPSCFVMS---SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 143 vHrDLKP~NILl~---~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||||||+|||++ .++.+||+|||++........
T Consensus 132 vHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~~------------------------------------------- 168 (444)
T 3soa_A 132 VHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQ------------------------------------------- 168 (444)
T ss_dssp BCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTCC-------------------------------------------
T ss_pred cccCCCHHHEEEeccCCCCcEEEccCceeEEecCCCc-------------------------------------------
Confidence 9999999999998 457899988888743221100
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhh
Q 004987 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
......||+.|+|||++.+..++.++|||||||
T Consensus 169 -----------------------------------------------~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGv 201 (444)
T 3soa_A 169 -----------------------------------------------AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGV 201 (444)
T ss_dssp -----------------------------------------------BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHH
T ss_pred -----------------------------------------------eeecccCCcccCCHHHhcCCCCCCccccHHHHH
Confidence 001147899999999999989999999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcCC--CCccc-cccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCC
Q 004987 300 LLFELFC---PFSTGEEKTRTMSSLRHRV--LPPQL-LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 366 (720)
Q Consensus 300 lL~eLlt---pf~~~~~~~~~~~~i~~~~--~p~~~-~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~ 366 (720)
++|+|++ ||...... .....+..+. ++... ....+...+||.+||++||.+|||+.|+|+||||+.
T Consensus 202 ilyell~G~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~hp~~~~ 273 (444)
T 3soa_A 202 ILYILLVGYPPFWDEDQH-RLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWISH 273 (444)
T ss_dssp HHHHHHHSSCSCCCSSHH-HHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSCTTHH
T ss_pred HHHHHHhCCCCCCCccHH-HHHHHHHhCCCCCCccccccCCHHHHHHHHHHcCCChhHCCCHHHHhcCccccC
Confidence 9999999 56554443 3444444432 22222 233455569999999999999999999999999975
No 43
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=6.3e-36 Score=322.28 Aligned_cols=206 Identities=17% Similarity=0.211 Sum_probs=160.8
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004987 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~gI 142 (720)
+..+|..++..++||||+++++ ++.... .+|+||||.+++|.+++...+ .+++.+++.++.||+.||.|||++||
T Consensus 55 ~~~~E~~~l~~l~hpnIv~l~~-~~~~~~---~~~lv~E~~~g~l~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH~~gi 129 (336)
T 3h4j_B 55 RVEREISYLKLLRHPHIIKLYD-VITTPT---DIVMVIEYAGGELFDYIVEKK-RMTEDEGRRFFQQIICAIEYCHRHKI 129 (336)
T ss_dssp HHHHHHHHHTTCCCTTBCCEEE-EEECSS---EEEEEECCCCEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHhCCCCCCCeEEE-EEEeCC---EEEEEEECCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 4457888999999999999999 565543 579999998889999995443 49999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004987 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.+||+|||++...... .+
T Consensus 130 vH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~----------------------------------~~------------ 163 (336)
T 3h4j_B 130 VHRDLKPENLLLDDNLNVKIADFGLSNIMTDG----------------------------------NF------------ 163 (336)
T ss_dssp CCCCCSTTTEEECTTCCEEECCSSCTBTTTTS----------------------------------BT------------
T ss_pred EecCCchhhEEEcCCCCEEEEEeccceeccCC----------------------------------cc------------
Confidence 99999999999999999999988877432110 00
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCC-Cccccchhhhhhh
Q 004987 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYRLGVLL 301 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~-s~~sDIwSLGvlL 301 (720)
....+||+.|+|||++.+..+ ++++|||||||++
T Consensus 164 ---------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il 198 (336)
T 3h4j_B 164 ---------------------------------------------LKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVL 198 (336)
T ss_dssp ---------------------------------------------TCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHH
T ss_pred ---------------------------------------------cccccCCcCcCCHHHHcCCCCCCCccchhHHHHHH
Confidence 011468999999999998875 7899999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccc-cCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004987 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~i~~~~~p~~~~~-~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|+|++ ||...... .....+.... ..++. ..+...+||.+||.+||.+|||+.|+++||||+..
T Consensus 199 ~~ll~g~~Pf~~~~~~-~~~~~i~~~~--~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~~ 265 (336)
T 3h4j_B 199 YVMLVGRLPFDDEFIP-NLFKKVNSCV--YVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRDPWFNVN 265 (336)
T ss_dssp HHHHHSSCSSBCSSST-TCBCCCCSSC--CCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTCHHHHTT
T ss_pred HHHHhCCCCCCCccHH-HHHHHHHcCC--CCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhChhhccC
Confidence 99999 56543221 1111111111 11122 23445699999999999999999999999999865
No 44
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=4e-35 Score=317.87 Aligned_cols=202 Identities=12% Similarity=0.108 Sum_probs=164.8
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004987 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~gIv 143 (720)
.+|..+|..++||||+++++ ++.+.. .+|+|||| .|++|.+++.+.+ .+++..++.++.||+.||.|||++||+
T Consensus 89 ~~E~~~l~~l~hp~iv~~~~-~~~~~~---~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~iv 163 (350)
T 1rdq_E 89 LNEKRILQAVNFPFLVKLEF-SFKDNS---NLYMVMEYVAGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYLHSLDLI 163 (350)
T ss_dssp HHHHHHHTTCCCTTBCCEEE-EEECSS---EEEEEEECCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHhCCCCCCCeEEE-EEEcCC---EEEEEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 36778999999999999999 555543 67999999 8999999996543 499999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004987 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.+|.+||+|||++......
T Consensus 164 HrDlkp~NIll~~~g~~kL~DFg~a~~~~~~------------------------------------------------- 194 (350)
T 1rdq_E 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------------------------------------------------- 194 (350)
T ss_dssp CCCCSGGGEEECTTSCEEECCCTTCEECSSC-------------------------------------------------
T ss_pred cccCccceEEECCCCCEEEcccccceeccCC-------------------------------------------------
Confidence 9999999999999999999888877322100
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004987 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGvlL~e 303 (720)
....+||+.|+|||++.+..++.++|||||||++||
T Consensus 195 --------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e 230 (350)
T 1rdq_E 195 --------------------------------------------TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYE 230 (350)
T ss_dssp --------------------------------------------BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHH
T ss_pred --------------------------------------------cccccCCccccCHHHhcCCCCCCcCCEecccHhHhH
Confidence 011478999999999999999999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCCCcccccc-CchHHHHHHHcCCCCCCCCCC-----hHHHHcCcccCCC
Q 004987 304 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLK-FPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~i~~~~~p~~~~~~-~p~~~~Li~~~L~~dP~~Rpt-----a~eiL~hp~~~~~ 367 (720)
|++ ||...... ..+..+..+.++ ++.. .+...+||.+||+.||.+||+ ++||++||||...
T Consensus 231 ll~g~~Pf~~~~~~-~~~~~i~~~~~~--~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h~~f~~~ 300 (350)
T 1rdq_E 231 MAAGYPPFFADQPI-QIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATT 300 (350)
T ss_dssp HHHSSCSSCCSSHH-HHHHHHHHCCCC--CCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGGTTC
T ss_pred HhhCCCCCCCCCHH-HHHHHHHcCCCC--CCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhCcCcCCC
Confidence 999 66655443 444444443221 1222 344569999999999999998 9999999999875
No 45
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=2.5e-35 Score=328.44 Aligned_cols=208 Identities=16% Similarity=0.210 Sum_probs=166.6
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004987 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~gIvH 144 (720)
+|..++..++|||||++++ ++.+.. .+|+|||| .|++|.++|.+....+++..++.++.||+.||.|||++||||
T Consensus 123 ~E~~il~~~~hp~Iv~l~~-~~~~~~---~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~giiH 198 (437)
T 4aw2_A 123 EERDVLVNGDSKWITTLHY-AFQDDN---NLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVH 198 (437)
T ss_dssp HHHHHHHHSCTTTBCCEEE-EEECSS---EEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhCCCCCEEEEEE-EEeeCC---EEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhCCeEe
Confidence 5666888999999999999 665554 57999999 899999999765566999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004987 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+|||++.++.+||+|||++........
T Consensus 199 rDLKp~NILl~~~g~vkL~DFGla~~~~~~~~------------------------------------------------ 230 (437)
T 4aw2_A 199 RDIKPDNILMDMNGHIRLADFGSCLKLMEDGT------------------------------------------------ 230 (437)
T ss_dssp CCCSGGGEEECTTSCEEECCCTTCEECCTTSC------------------------------------------------
T ss_pred cccCHHHeeEcCCCCEEEcchhhhhhcccCCC------------------------------------------------
Confidence 99999999999999999998888743211100
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCcccc-----CCCCCccccchhhhh
Q 004987 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-----GAPVSCASDIYRLGV 299 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~-----~~~~s~~sDIwSLGv 299 (720)
......+||++|+|||++. ...|+.++|||||||
T Consensus 231 -----------------------------------------~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGv 269 (437)
T 4aw2_A 231 -----------------------------------------VQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGV 269 (437)
T ss_dssp -----------------------------------------EECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHH
T ss_pred -----------------------------------------cccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHH
Confidence 0001147999999999997 455899999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhh----cCCCCccccccCchHHHHHHHcCCCCCCC--CCChHHHHcCcccCCC
Q 004987 300 LLFELFC---PFSTGEEKTRTMSSLR----HRVLPPQLLLKFPKEASFCLWLLHPEPSG--RPKMGELLQSEFLNEP 367 (720)
Q Consensus 300 lL~eLlt---pf~~~~~~~~~~~~i~----~~~~p~~~~~~~p~~~~Li~~~L~~dP~~--Rpta~eiL~hp~~~~~ 367 (720)
++|||++ ||....... .+..+. ...+|.......+...+||.+||..+|.+ ||+++|+++||||+..
T Consensus 270 il~elltG~~Pf~~~~~~~-~~~~i~~~~~~~~~p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~Hpff~~i 345 (437)
T 4aw2_A 270 CMYEMLYGETPFYAESLVE-TYGKIMNHKERFQFPTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKHPFFSGI 345 (437)
T ss_dssp HHHHHHHSSCTTCCSSHHH-HHHHHHTHHHHCCCCSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTSGGGTTC
T ss_pred HHHHHHhCCCCCCCCChhH-HHHhhhhccccccCCcccccCCHHHHHHHHHHhcccccccCCCCHHHHhCCCccCCC
Confidence 9999999 676654443 333332 23344444445566679999999998888 9999999999999976
No 46
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=4.1e-35 Score=317.52 Aligned_cols=207 Identities=16% Similarity=0.146 Sum_probs=165.1
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004987 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~gIv 143 (720)
..+|..+|.+++|||||++++ ++.... ..|+||||..++|.+++......+++.+++.++.||+.||.|||++||+
T Consensus 101 ~~~E~~~l~~l~hpniv~~~~-~~~~~~---~~~lv~e~~~g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iv 176 (348)
T 1u5q_A 101 IIKEVRFLQKLRHPNTIQYRG-CYLREH---TAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMI 176 (348)
T ss_dssp HHHHHHHHHHCCCTTBCCEEE-EEEETT---EEEEEEECCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCB
T ss_pred HHHHHHHHHhCCCCCEeeEEE-EEEECC---eEEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 347888999999999999999 555443 6799999966899998855455699999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004987 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.+||+|||++......
T Consensus 177 H~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~------------------------------------------------- 207 (348)
T 1u5q_A 177 HRDVKAGNILLSEPGLVKLGDFGSASIMAPA------------------------------------------------- 207 (348)
T ss_dssp CCCCSGGGEEEETTTEEEECCCTTCBSSSSB-------------------------------------------------
T ss_pred eCCCCHHHEEECCCCCEEEeeccCceecCCC-------------------------------------------------
Confidence 9999999999999999999888877322100
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCcccc---CCCCCccccchhhhhh
Q 004987 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA---GAPVSCASDIYRLGVL 300 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~---~~~~s~~sDIwSLGvl 300 (720)
....||+.|+|||++. +..++.++|||||||+
T Consensus 208 ---------------------------------------------~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~i 242 (348)
T 1u5q_A 208 ---------------------------------------------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT 242 (348)
T ss_dssp ---------------------------------------------CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHH
T ss_pred ---------------------------------------------CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHH
Confidence 0136899999999985 4558999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCccccccCch-HHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004987 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 301 L~eLlt---pf~~~~~~~~~~~~i~~~~~p~~~~~~~p~-~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
+|||++ ||.......... .+.....+......++. ..+||.+||+.||.+|||+.++|+||||.....
T Consensus 243 l~ell~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h~~~~~~~~ 314 (348)
T 1u5q_A 243 CIELAERKPPLFNMNAMSALY-HIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERP 314 (348)
T ss_dssp HHHHHHSSCTTTTSCHHHHHH-HHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHHHHSCCC
T ss_pred HHHHHhCCCCCCCCChHHHHH-HHHhcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHhhChhhhccCC
Confidence 999999 666554443333 33333333333334444 459999999999999999999999999987644
No 47
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=7.1e-35 Score=303.87 Aligned_cols=207 Identities=18% Similarity=0.263 Sum_probs=157.0
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004987 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~gI 142 (720)
+..+|..++..++||||+++++ ++.+.. .+++||||.+++|.+++.... .+++.+++.++.||+.||.|||++||
T Consensus 59 ~~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~i~~~l~~LH~~~i 133 (275)
T 2eue_A 59 RIEREISYLRLLRHPHIIKLYD-VIKSKD---EIIMVIEYAGNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCHRHKI 133 (275)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EEECSS---CEEEEEECCCEEHHHHHHTSS-SCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhCCCCCeEEEEE-EEecCC---eEEEEehhcCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCC
Confidence 4447888999999999999999 555443 579999998889999985543 49999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004987 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.++|+|||.+.......
T Consensus 134 ~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~----------------------------------------------- 166 (275)
T 2eue_A 134 VHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN----------------------------------------------- 166 (275)
T ss_dssp CCCCCSGGGEEECTTSCEEECCSSCC------------------------------------------------------
T ss_pred eeccCChHhEEECCCCCEEEeecccceeccCcc-----------------------------------------------
Confidence 999999999999999999999888773321110
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCC-Cccccchhhhhhh
Q 004987 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYRLGVLL 301 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~-s~~sDIwSLGvlL 301 (720)
......||+.|+|||++.+..+ +.++|||||||++
T Consensus 167 --------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il 202 (275)
T 2eue_A 167 --------------------------------------------FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVIL 202 (275)
T ss_dssp ----------------------------------------------------CTTCCHHHHCC-----THHHHHHHHHHH
T ss_pred --------------------------------------------cccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHH
Confidence 0001368999999999988775 7899999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004987 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~i~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|+|++ ||...... .....+.....+ ......+...+|+.+||++||.+|||+.|+|+||||+..
T Consensus 203 ~~l~~g~~pf~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h~~f~~~ 269 (275)
T 2eue_A 203 YVMLCRRLPFDDESIP-VLFKNISNGVYT-LPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKVD 269 (275)
T ss_dssp HHHHHSSCSSCCSSHH-HHHHHHHHTCCC-CCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTCHHHHTT
T ss_pred HHHHhCCCCCCCCCHH-HHHHHHHhCCCC-CCccCCHHHHHHHHHHhhcCHhHCCCHHHHhhCCeeccc
Confidence 99999 67665443 333334333221 111233455699999999999999999999999999875
No 48
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=7.9e-35 Score=319.75 Aligned_cols=209 Identities=19% Similarity=0.276 Sum_probs=166.4
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004987 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~gI 142 (720)
..+|..+|.+++|||||++++ ++.+.. .+|+|||| .|++|.+++......+++.+++.++.||+.||.|||++||
T Consensus 95 ~~~E~~il~~l~hpnIv~~~~-~~~~~~---~~~lv~E~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~gi 170 (387)
T 1kob_A 95 VKNEISIMNQLHHPKLINLHD-AFEDKY---EMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSI 170 (387)
T ss_dssp HHHHHHHHTTCCSTTBCCEEE-EEECSS---EEEEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHhCCCcCCCeEEE-EEEeCC---EEEEEEEcCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 347888999999999999999 555543 67999999 8999999996665569999999999999999999999999
Q ss_pred eeccCCCCcEEEcc--CCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004987 143 VVHNVRPSCFVMSS--FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 143 vHrDLKP~NILl~~--~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
+||||||+|||++. .+.+||+|||++.......
T Consensus 171 vHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~--------------------------------------------- 205 (387)
T 1kob_A 171 VHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE--------------------------------------------- 205 (387)
T ss_dssp ECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTS---------------------------------------------
T ss_pred eecccchHHeEEecCCCCceEEEecccceecCCCc---------------------------------------------
Confidence 99999999999974 4679998888774321110
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhh
Q 004987 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
......||+.|+|||++.+..++.++|||||||+
T Consensus 206 ----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~i 239 (387)
T 1kob_A 206 ----------------------------------------------IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVL 239 (387)
T ss_dssp ----------------------------------------------CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHH
T ss_pred ----------------------------------------------ceeeeccCCCccCchhccCCCCCCcccEeeHhHH
Confidence 0011368999999999999889999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcC--CCCccccc-cCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004987 301 LFELFC---PFSTGEEKTRTMSSLRHR--VLPPQLLL-KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 301 L~eLlt---pf~~~~~~~~~~~~i~~~--~~p~~~~~-~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
+|||++ ||...... .....+... .+++.... ..+...+||.+||+.||.+|||+.|+|+||||+...
T Consensus 240 l~elltg~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 312 (387)
T 1kob_A 240 GYVLLSGLSPFAGEDDL-ETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDH 312 (387)
T ss_dssp HHHHHHSCCSSCCSSHH-HHHHHHHHCCCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTSTTTSSCC
T ss_pred HHHHHhCCCCCCCCCHH-HHHHHHHhCCCCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCccccCCc
Confidence 999999 66655443 333333332 22333333 334556999999999999999999999999998764
No 49
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=3.2e-35 Score=314.87 Aligned_cols=211 Identities=13% Similarity=0.149 Sum_probs=165.2
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004987 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~gIv 143 (720)
.+|..++..++|||||++++ ++..+. ..|+|||| .|++|.+++... ..+++.+++.++.||+.||.|||++||+
T Consensus 53 ~~E~~~l~~l~hpnIv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~LH~~giv 127 (323)
T 3tki_A 53 KKEICINKMLNHENVVKFYG-HRREGN---IQYLFLEYCSGGELFDRIEPD-IGMPEPDAQRFFHQLMAGVVYLHGIGIT 127 (323)
T ss_dssp HHHHHHHHHCCCTTBCCEEE-EEECSS---EEEEEEECCTTEEGGGGSBTT-TBCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHhCCCCCCCeEEE-EEecCC---eEEEEEEcCCCCcHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 36778999999999999999 555543 67999999 889999999544 4499999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004987 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.+||+|||++..+......
T Consensus 128 H~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~---------------------------------------------- 161 (323)
T 3tki_A 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRE---------------------------------------------- 161 (323)
T ss_dssp CSCCSGGGEEECTTCCEEECCCTTCEECEETTEE----------------------------------------------
T ss_pred ccccchHHEEEeCCCCEEEEEeeccceeccCCcc----------------------------------------------
Confidence 9999999999999999999998887432111000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCC-Cccccchhhhhhhh
Q 004987 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYRLGVLLF 302 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~-s~~sDIwSLGvlL~ 302 (720)
.......||+.|+|||++.+..+ +.++|||||||++|
T Consensus 162 ------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ 199 (323)
T 3tki_A 162 ------------------------------------------RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLT 199 (323)
T ss_dssp ------------------------------------------CCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHH
T ss_pred ------------------------------------------cccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHH
Confidence 00011478999999999988775 78999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhc-CCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004987 303 ELFC---PFSTGEEKTRTMSSLRH-RVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~i~~-~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
+|++ ||............+.. ....+.+....+...+||.+||+.||.+|||+.|+|+||||+...
T Consensus 200 ~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~~~ 269 (323)
T 3tki_A 200 AMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPL 269 (323)
T ss_dssp HHHHSSCSCSSSCTTSHHHHHHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCCC
T ss_pred HHHhCCCCCCCCchHHHHHHHHhcccccCCccccCCHHHHHHHHHHccCChhhCcCHHHHhhChhhcccc
Confidence 9999 66654433233333332 222233334445556999999999999999999999999998763
No 50
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=4.4e-35 Score=321.18 Aligned_cols=206 Identities=16% Similarity=0.212 Sum_probs=162.4
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004987 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~gI 142 (720)
..+|..+|..++|||||++++ ++.+.. .+|+|||| .|++|.+++... ..+++..++.|+.||+.||.|||++||
T Consensus 62 ~~~E~~il~~l~hp~Iv~l~~-~~~~~~---~~~lv~e~~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~LH~~gi 136 (384)
T 4fr4_A 62 VFKELQIMQGLEHPFLVNLWY-SFQDEE---DMFMVVDLLLGGDLRYHLQQN-VHFKEETVKLFICELVMALDYLQNQRI 136 (384)
T ss_dssp HHHHHHHHHTCCCTTBCCEEE-EEECSS---EEEEEECCCTTEEHHHHHHTT-CCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHhCCCCCCCcEEE-EEEeCC---EEEEEEecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 336888999999999999999 665543 57999999 899999999654 349999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004987 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.+|.+||+|||++.......
T Consensus 137 vHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~----------------------------------------------- 169 (384)
T 4fr4_A 137 IHRDMKPDNILLDEHGHVHITDFNIAAMLPRET----------------------------------------------- 169 (384)
T ss_dssp ECCCCSGGGEEECTTSCEEECCCTTCEECCTTC-----------------------------------------------
T ss_pred eeccCcHHHeEECCCCCEEEeccceeeeccCCC-----------------------------------------------
Confidence 999999999999999999999888874321110
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC---CCCCccccchhhhh
Q 004987 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG---APVSCASDIYRLGV 299 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~---~~~s~~sDIwSLGv 299 (720)
.....+||+.|+|||++.+ ..|+.++|||||||
T Consensus 170 --------------------------------------------~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~ 205 (384)
T 4fr4_A 170 --------------------------------------------QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGV 205 (384)
T ss_dssp --------------------------------------------CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHH
T ss_pred --------------------------------------------ceeccCCCccccCCeeeccCCCCCCCccceeechHH
Confidence 0011478999999999974 34899999999999
Q ss_pred hhhhccc---cCCCC--chHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCC-hHHHHcCcccCCC
Q 004987 300 LLFELFC---PFSTG--EEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPK-MGELLQSEFLNEP 367 (720)
Q Consensus 300 lL~eLlt---pf~~~--~~~~~~~~~i~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpt-a~eiL~hp~~~~~ 367 (720)
++|||++ ||... .........+..... .++..+ +...+||.+||++||.+||+ ++++++||||...
T Consensus 206 il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~--~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~hp~f~~~ 278 (384)
T 4fr4_A 206 TAYELLRGRRPYHIRSSTSSKEIVHTFETTVV--TYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQNFPYMNDI 278 (384)
T ss_dssp HHHHHHHSSCSSCCCTTSCHHHHHHHHHHCCC--CCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHTSGGGTTC
T ss_pred HHHHHHhCCCCCCCCCCccHHHHHHHHhhccc--CCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHcChhhhcC
Confidence 9999999 66532 222233333332221 112223 44559999999999999998 8999999999986
No 51
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=1.5e-35 Score=320.57 Aligned_cols=204 Identities=18% Similarity=0.248 Sum_probs=162.4
Q ss_pred ehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004987 66 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~gIv 143 (720)
.|..+|..+ +||||+++++ ++++.. .+|+|||| .|++|.+++...+ .+++.+++.++.||+.||.|||++||+
T Consensus 66 ~E~~il~~~~~hp~iv~l~~-~~~~~~---~~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~iv 140 (345)
T 1xjd_A 66 VEKRVLSLAWEHPFLTHMFC-TFQTKE---NLFFVMEYLNGGDLMYHIQSCH-KFDLSRATFYAAEIILGLQFLHSKGIV 140 (345)
T ss_dssp HHHHHHHHHTTCTTBCCEEE-EEECSS---EEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTCB
T ss_pred HHHHHHHhcCCCCCCCcEEE-EEEeCC---EEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeE
Confidence 555667664 9999999999 565543 57999999 8999999995533 499999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004987 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.+|++||+|||+++...... .
T Consensus 141 HrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~----------------------------------~------------- 173 (345)
T 1xjd_A 141 YRDLKLDNILLDKDGHIKIADFGMCKENMLGD----------------------------------A------------- 173 (345)
T ss_dssp CCCCCGGGEEECTTSCEEECCCTTCBCCCCTT----------------------------------C-------------
T ss_pred eCCCChhhEEECCCCCEEEeEChhhhhcccCC----------------------------------C-------------
Confidence 99999999999999999999888874321000 0
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004987 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGvlL~e 303 (720)
.....+||+.|+|||++.+..++.++|||||||++||
T Consensus 174 -------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e 210 (345)
T 1xjd_A 174 -------------------------------------------KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYE 210 (345)
T ss_dssp -------------------------------------------CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHH
T ss_pred -------------------------------------------cccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHH
Confidence 0011478999999999999999999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCCCccccc-cCchHHHHHHHcCCCCCCCCCChH-HHHcCcccCCC
Q 004987 304 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPKMG-ELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~i~~~~~p~~~~~-~~p~~~~Li~~~L~~dP~~Rpta~-eiL~hp~~~~~ 367 (720)
|++ ||...... .....+..... .++. ..+...+||.+||+.||.+||++. +|++||||+..
T Consensus 211 ll~g~~Pf~~~~~~-~~~~~i~~~~~--~~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~~hp~f~~~ 276 (345)
T 1xjd_A 211 MLIGQSPFHGQDEE-ELFHSIRMDNP--FYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREI 276 (345)
T ss_dssp HHHSSCSSCCSSHH-HHHHHHHHCCC--CCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGSGGGTTC
T ss_pred HhcCCCCCCCCCHH-HHHHHHHhCCC--CCCcccCHHHHHHHHHHhcCCHhHcCCChHHHHcCccccCC
Confidence 999 67655443 34444443321 1222 234455999999999999999998 99999999986
No 52
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=8.1e-35 Score=320.27 Aligned_cols=205 Identities=19% Similarity=0.279 Sum_probs=160.5
Q ss_pred ehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004987 66 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~gIv 143 (720)
+|..+|.++ +|||||++++ ++.+.. .+|+|||| .|++|.+++.+. ..+++..++.++.||+.||.|||++||+
T Consensus 101 ~E~~il~~~~~hp~Iv~l~~-~~~~~~---~~~lV~E~~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~LH~~giv 175 (396)
T 4dc2_A 101 TEKHVFEQASNHPFLVGLHS-CFQTES---RLFFVIEYVNGGDLMFHMQRQ-RKLPEEHARFYSAEISLALNYLHERGII 175 (396)
T ss_dssp HHHHHHHHHTTCTTBCCEEE-EEECSS---EEEEEEECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTTCB
T ss_pred HHHHHHHhcCCCCCcCeeEE-EEEECC---EEEEEEEcCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCEE
Confidence 566677665 8999999999 665543 67999999 899999999554 3499999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004987 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.+|++||+|||+++...... +
T Consensus 176 HrDLKp~NILl~~~g~ikL~DFGla~~~~~~~---------------------------------~-------------- 208 (396)
T 4dc2_A 176 YRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG---------------------------------D-------------- 208 (396)
T ss_dssp CCCCCGGGEEECTTSCEEECCCTTCBCCCCTT---------------------------------C--------------
T ss_pred eccCCHHHEEECCCCCEEEeecceeeecccCC---------------------------------C--------------
Confidence 99999999999999999999888874311100 0
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004987 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGvlL~e 303 (720)
.....+||+.|+|||++.+..++.++|||||||++||
T Consensus 209 -------------------------------------------~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllye 245 (396)
T 4dc2_A 209 -------------------------------------------TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFE 245 (396)
T ss_dssp -------------------------------------------CBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHH
T ss_pred -------------------------------------------ccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHH
Confidence 0012579999999999999999999999999999999
Q ss_pred ccc---cCCCCc--------hHHHHHHHhhcCCCCccccc-cCchHHHHHHHcCCCCCCCCCCh------HHHHcCcccC
Q 004987 304 LFC---PFSTGE--------EKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPKM------GELLQSEFLN 365 (720)
Q Consensus 304 Llt---pf~~~~--------~~~~~~~~i~~~~~p~~~~~-~~p~~~~Li~~~L~~dP~~Rpta------~eiL~hp~~~ 365 (720)
|++ ||.... ........+....+ .++. ..+...+||.+||++||.+||++ .||++||||+
T Consensus 246 ll~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~--~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hpff~ 323 (396)
T 4dc2_A 246 MMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI--RIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFR 323 (396)
T ss_dssp HHHSSCSSTTTTC------CCHHHHHHHHHHCCC--CCCTTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHSTTTT
T ss_pred HHhCCCCCcccccccccchhhHHHHHHHHhcccc--CCCCcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcCcccc
Confidence 999 664211 11223333333221 1112 33455699999999999999985 7999999998
Q ss_pred CC
Q 004987 366 EP 367 (720)
Q Consensus 366 ~~ 367 (720)
..
T Consensus 324 ~i 325 (396)
T 4dc2_A 324 NV 325 (396)
T ss_dssp TC
T ss_pred CC
Confidence 86
No 53
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=2.8e-34 Score=310.99 Aligned_cols=209 Identities=15% Similarity=0.151 Sum_probs=159.1
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004987 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~gIv 143 (720)
.+|..+|.+++||||+++++ ++.... .+++|||| .|++|.+++... ..+++.+++.++.||+.||.|||++||+
T Consensus 96 ~~E~~~l~~l~h~niv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~L~~LH~~~iv 170 (349)
T 2w4o_A 96 RTEIGVLLRLSHPNIIKLKE-IFETPT---EISLVLELVTGGELFDRIVEK-GYYSERDAADAVKQILEAVAYLHENGIV 170 (349)
T ss_dssp ---CHHHHHCCCTTBCCEEE-EEECSS---EEEEEECCCCSCBHHHHHTTC-SSCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHhCCCCCCcceee-eEecCC---eEEEEEEeCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeE
Confidence 36777899999999999999 555543 57999999 899999999554 3499999999999999999999999999
Q ss_pred eccCCCCcEEEcc---CCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004987 144 VHNVRPSCFVMSS---FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 144 HrDLKP~NILl~~---~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||||||+|||++. ++.+||+|||++.......
T Consensus 171 H~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~--------------------------------------------- 205 (349)
T 2w4o_A 171 HRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQV--------------------------------------------- 205 (349)
T ss_dssp CCCCCGGGEEESSSSTTCCEEECCCC------------------------------------------------------
T ss_pred ecCCCcccEEEecCCCCCCEEEccCccccccCccc---------------------------------------------
Confidence 9999999999975 7899998888773321100
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhh
Q 004987 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
......||+.|+|||++.+..++.++|||||||+
T Consensus 206 ----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~i 239 (349)
T 2w4o_A 206 ----------------------------------------------LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGII 239 (349)
T ss_dssp -----------------------------------------------------CGGGSCHHHHTTCCCCTHHHHHHHHHH
T ss_pred ----------------------------------------------ccccccCCCCccCHHHhcCCCCCcccchHHHHHH
Confidence 0011468999999999999889999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCC--Cccccc-cCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004987 301 LFELFC---PFSTGEEKTRTMSSLRHRVL--PPQLLL-KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 301 L~eLlt---pf~~~~~~~~~~~~i~~~~~--p~~~~~-~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
+|||++ ||............+..... ++.... ..+...+||.+||.+||.+|||+.|+|+||||.....
T Consensus 240 l~ell~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~~ 314 (349)
T 2w4o_A 240 TYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPWVTGKAA 314 (349)
T ss_dssp HHHHHHSSCTTCCTTCHHHHHHHHHTTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTTSTTC
T ss_pred HHHHHhCCCCCCCCcccHHHHHHHHhCCCccCCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhcCcccCCCcc
Confidence 999999 66555444434444444322 222223 3344559999999999999999999999999997643
No 54
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.2e-34 Score=305.86 Aligned_cols=206 Identities=15% Similarity=0.189 Sum_probs=160.5
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004987 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~gIv 143 (720)
.+|..+|.+++||||+++++ ++.... ...+|+|||| .+++|.+++.. ..+++.+++.++.||+.||.|||++||+
T Consensus 84 ~~E~~~l~~l~h~~iv~~~~-~~~~~~-~~~~~lv~e~~~~~~l~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~iv 159 (298)
T 2zv2_A 84 YQEIAILKKLDHPNVVKLVE-VLDDPN-EDHLYMVFELVNQGPVMEVPTL--KPLSEDQARFYFQDLIKGIEYLHYQKII 159 (298)
T ss_dssp HHHHHHHHTCCCTTBCCEEE-EEECSS-SSEEEEEEECCTTCBSCCSSCS--SCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHhCCCCCCCeEEE-EEEcCC-CCEEEEEEecCCCCcHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 37888999999999999999 554432 2368999999 88999886633 3599999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004987 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.+||+|||++........
T Consensus 160 H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~----------------------------------------------- 192 (298)
T 2zv2_A 160 HRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDA----------------------------------------------- 192 (298)
T ss_dssp CCCCCGGGEEECTTSCEEECCCTTCEECSSSSC-----------------------------------------------
T ss_pred ccCCCHHHEEECCCCCEEEecCCCccccccccc-----------------------------------------------
Confidence 999999999999999999998888743211100
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC---CCccccchhhhhh
Q 004987 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP---VSCASDIYRLGVL 300 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~---~s~~sDIwSLGvl 300 (720)
......||+.|+|||++.+.. ++.++|||||||+
T Consensus 193 -------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~ 229 (298)
T 2zv2_A 193 -------------------------------------------LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVT 229 (298)
T ss_dssp -------------------------------------------EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHH
T ss_pred -------------------------------------------cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHH
Confidence 001146899999999998765 4788999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCC-ccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccC
Q 004987 301 LFELFC---PFSTGEEKTRTMSSLRHRVLP-PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLN 365 (720)
Q Consensus 301 L~eLlt---pf~~~~~~~~~~~~i~~~~~p-~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~ 365 (720)
+|+|++ ||...... .....+....++ +......+...+||.+||++||.+|||+.|+|+||||+
T Consensus 230 l~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~hp~~~ 297 (298)
T 2zv2_A 230 LYCFVFGQCPFMDERIM-CLHSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWVT 297 (298)
T ss_dssp HHHHHHSSCSSCCSSHH-HHHHHHHHCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTCHHHH
T ss_pred HHHHHHCCCCCCCccHH-HHHHHHhcccCCCCCccccCHHHHHHHHHHhhcChhhCCCHHHHhcCcccc
Confidence 999999 66654433 333334333332 22223334556999999999999999999999999986
No 55
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=2.8e-34 Score=324.51 Aligned_cols=207 Identities=19% Similarity=0.221 Sum_probs=164.8
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004987 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~g 141 (720)
+..+|..+|.+++|||||++++ ++.+.. .+|+|||| .|++|.+++.... .+++.+++.++.||+.||.|||++|
T Consensus 72 ~~~~E~~~l~~l~hpniv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~ 146 (484)
T 3nyv_A 72 SLLREVQLLKQLDHPNIMKLYE-FFEDKG---YFYLVGEVYTGGELFDEIISRK-RFSEVDAARIIRQVLSGITYMHKNK 146 (484)
T ss_dssp HHHHHHHHHTTCCCTTBCCEEE-EEECSS---EEEEEECCCCSCBHHHHHHTCS-CCBHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCCCcEEE-EEEeCC---EEEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3447888999999999999999 665543 67999999 8999999996544 4999999999999999999999999
Q ss_pred ceeccCCCCcEEE---ccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCC
Q 004987 142 IVVHNVRPSCFVM---SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 142 IvHrDLKP~NILl---~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~ 218 (720)
|+||||||+|||+ +.++.+||+|||++.......
T Consensus 147 ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~------------------------------------------- 183 (484)
T 3nyv_A 147 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK------------------------------------------- 183 (484)
T ss_dssp CCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCCC-------------------------------------------
T ss_pred eeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccccc-------------------------------------------
Confidence 9999999999999 467889998888773321110
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhh
Q 004987 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
.....+||+.|+|||++.+ .++.++||||||
T Consensus 184 ------------------------------------------------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG 214 (484)
T 3nyv_A 184 ------------------------------------------------KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTG 214 (484)
T ss_dssp ------------------------------------------------SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHH
T ss_pred ------------------------------------------------ccccCCCCccccCceeecC-CCCCcceeHHHH
Confidence 0011468999999999987 589999999999
Q ss_pred hhhhhccc---cCCCCchHHHHHHHhhcCCCC---ccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004987 299 VLLFELFC---PFSTGEEKTRTMSSLRHRVLP---PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 299 vlL~eLlt---pf~~~~~~~~~~~~i~~~~~p---~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|++|+|++ ||...... ..+..+..+.++ +.+....+...+||.+||++||.+|||+.|+|+||||+..
T Consensus 215 ~il~~ll~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h~~~~~~ 288 (484)
T 3nyv_A 215 VILYILLSGCPPFNGANEY-DILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTY 288 (484)
T ss_dssp HHHHHHHHSSCSSCCSSHH-HHHHHHHHCCCCCCSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHHH
T ss_pred HHHHHHHHCCCCCCCCCHH-HHHHHHHcCCCCCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhhChhhccc
Confidence 99999999 66665444 344444444332 2223344455699999999999999999999999999864
No 56
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=1.8e-34 Score=312.72 Aligned_cols=208 Identities=19% Similarity=0.242 Sum_probs=162.9
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004987 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~---~~~~l~~~~~~~i~~QIl~aL~~LHs 139 (720)
..+|..++..++|||||++++ ++.... .+|+|||| .|++|.+++.. .+..+++..++.++.||+.||.|||+
T Consensus 73 ~~~E~~~l~~l~hpnIv~~~~-~~~~~~---~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~ 148 (351)
T 3c0i_A 73 LKREASICHMLKHPHIVELLE-TYSSDG---MLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHD 148 (351)
T ss_dssp HHHHHHHHHHCCCTTBCCEEE-EEEETT---EEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCCcEEE-EEEeCC---EEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 347788999999999999999 555543 67999999 88999988832 33458999999999999999999999
Q ss_pred cCceeccCCCCcEEEccCCc---eEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCC
Q 004987 140 QGIVVHNVRPSCFVMSSFNH---VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 216 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~---vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~ 216 (720)
+||+||||||+|||++.++. +||+|||++...+....
T Consensus 149 ~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~~~~~~---------------------------------------- 188 (351)
T 3c0i_A 149 NNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGL---------------------------------------- 188 (351)
T ss_dssp TTEECSCCSGGGEEECSSSTTCCEEECCCTTCEECCTTSC----------------------------------------
T ss_pred CCceeccCChHHeEEecCCCCCcEEEecCcceeEecCCCe----------------------------------------
Confidence 99999999999999986654 99988887743321100
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchh
Q 004987 217 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYR 296 (720)
Q Consensus 217 ~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwS 296 (720)
.....+||+.|+|||++.+..++.++||||
T Consensus 189 --------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Diws 218 (351)
T 3c0i_A 189 --------------------------------------------------VAGGRVGTPHFMAPEVVKREPYGKPVDVWG 218 (351)
T ss_dssp --------------------------------------------------BCCCCCSCGGGCCHHHHTTCCBCTHHHHHH
T ss_pred --------------------------------------------------eecCCcCCcCccCHHHHcCCCCCchHhhHH
Confidence 001147899999999999988999999999
Q ss_pred hhhhhhhccc---cCCCCchHHHHHHHhhcCC--CCcccccc-CchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004987 297 LGVLLFELFC---PFSTGEEKTRTMSSLRHRV--LPPQLLLK-FPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 297 LGvlL~eLlt---pf~~~~~~~~~~~~i~~~~--~p~~~~~~-~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|||++|+|++ ||..... .....+..+. .++..... .+...+||.+||++||.+|||+.|+|+||||+..
T Consensus 219 lG~il~~ll~g~~pf~~~~~--~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~~ 293 (351)
T 3c0i_A 219 CGVILFILLSGCLPFYGTKE--RLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLKER 293 (351)
T ss_dssp HHHHHHHHHHSSCSSCSSHH--HHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTH
T ss_pred HHHHHHHHHHCCCCCCCcHH--HHHHHHHcCCCCCCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcChhhcCC
Confidence 9999999999 6655432 3334443332 22322233 3445599999999999999999999999999763
No 57
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=7.8e-35 Score=319.60 Aligned_cols=218 Identities=17% Similarity=0.122 Sum_probs=161.3
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004987 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~~LHs~ 140 (720)
+..+|..++.+++|||||++++ ++.... .+|+|||| .+++|.+++... ...+++..++.++.||+.||.|||++
T Consensus 72 ~~~~E~~~l~~l~h~niv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~ 147 (389)
T 3gni_B 72 FLQGELHVSKLFNHPNIVPYRA-TFIADN---ELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHM 147 (389)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EEEETT---EEEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCCCCCCCcEeE-EEEECC---EEEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 3346888999999999999999 555443 57999999 899999999443 34599999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004987 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+|||++.++.+||+|||.+.... +.|......
T Consensus 148 ~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~------------------------------------~~~~~~~~~--- 188 (389)
T 3gni_B 148 GYVHRSVKASHILISVDGKVYLSGLRSNLSMI------------------------------------SHGQRQRVV--- 188 (389)
T ss_dssp TEECCCCSGGGEEECTTCCEEECCGGGCEECE------------------------------------ETTEECSCB---
T ss_pred CeecCCCCHHHEEEcCCCCEEEcccccceeec------------------------------------ccccccccc---
Confidence 99999999999999999999999998763221 110000000
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC--CCCCccccchhhh
Q 004987 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG--APVSCASDIYRLG 298 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~--~~~s~~sDIwSLG 298 (720)
.......+||+.|+|||++.+ ..++.++||||||
T Consensus 189 --------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG 224 (389)
T 3gni_B 189 --------------------------------------------HDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVG 224 (389)
T ss_dssp --------------------------------------------CCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHH
T ss_pred --------------------------------------------ccccccccccccccCHHHHhccCCCCCcHhHHHHHH
Confidence 000011478999999999988 4699999999999
Q ss_pred hhhhhccc---cCCCCchHHHHHHHhhcCCCC---------------------------------------------ccc
Q 004987 299 VLLFELFC---PFSTGEEKTRTMSSLRHRVLP---------------------------------------------PQL 330 (720)
Q Consensus 299 vlL~eLlt---pf~~~~~~~~~~~~i~~~~~p---------------------------------------------~~~ 330 (720)
|++|||++ ||............+.. ..+ +..
T Consensus 225 ~il~el~~g~~pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (389)
T 3gni_B 225 ITACELANGHVPFKDMPATQMLLEKLNG-TVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYH 303 (389)
T ss_dssp HHHHHHHHSSCTTTTCCSTTHHHHC-------------------------------------------------------
T ss_pred HHHHHHHHCCCCCCCCCHHHHHHHHhcC-CCCccccccccccccccccccccccccccccccccCccccccCCCCCCccc
Confidence 99999999 66554333222222111 100 001
Q ss_pred cccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004987 331 LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 331 ~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
....+...+||.+||++||.+|||+.|+|+||||+...
T Consensus 304 ~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f~~~~ 341 (389)
T 3gni_B 304 RTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIK 341 (389)
T ss_dssp --CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGGGC-
T ss_pred cccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHHHHHh
Confidence 11223455999999999999999999999999998764
No 58
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=4e-35 Score=324.30 Aligned_cols=206 Identities=16% Similarity=0.200 Sum_probs=163.4
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004987 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~gIvH 144 (720)
+|..++..++|||||++++ ++.+.. .+|+|||| .|++|.+++... .+++..++.++.||+.||.|||++||+|
T Consensus 118 ~E~~il~~l~hp~Iv~l~~-~~~~~~---~~~lV~E~~~gg~L~~~l~~~--~~~e~~~~~~~~qi~~aL~~LH~~givH 191 (410)
T 3v8s_A 118 EERDIMAFANSPWVVQLFY-AFQDDR---YLYMVMEYMPGGDLVNLMSNY--DVPEKWARFYTAEVVLALDAIHSMGFIH 191 (410)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EEECSS---EEEEEECCCTTEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhCCCCCCCeEEE-EEEECC---EEEEEEeCCCCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEe
Confidence 5667889999999999999 665543 67999999 899999999653 3999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004987 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+|||++.+|++||+|||++........
T Consensus 192 rDLKp~NILl~~~g~ikL~DFG~a~~~~~~~~------------------------------------------------ 223 (410)
T 3v8s_A 192 RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGM------------------------------------------------ 223 (410)
T ss_dssp CCCSGGGEEECTTSCEEECCCTTCEECCTTSE------------------------------------------------
T ss_pred ccCCHHHeeECCCCCEEEeccceeEeeccCCc------------------------------------------------
Confidence 99999999999999999998888743221100
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC----CCccccchhhhhh
Q 004987 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP----VSCASDIYRLGVL 300 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~----~s~~sDIwSLGvl 300 (720)
......+||+.|+|||++.+.. ++.++|||||||+
T Consensus 224 -----------------------------------------~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvi 262 (410)
T 3v8s_A 224 -----------------------------------------VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVF 262 (410)
T ss_dssp -----------------------------------------EECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHH
T ss_pred -----------------------------------------ccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHH
Confidence 0001247999999999998765 8899999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcC---CCCccccccCchHHHHHHHcCCCCCCC--CCChHHHHcCcccCCC
Q 004987 301 LFELFC---PFSTGEEKTRTMSSLRHR---VLPPQLLLKFPKEASFCLWLLHPEPSG--RPKMGELLQSEFLNEP 367 (720)
Q Consensus 301 L~eLlt---pf~~~~~~~~~~~~i~~~---~~p~~~~~~~p~~~~Li~~~L~~dP~~--Rpta~eiL~hp~~~~~ 367 (720)
+|||++ ||...... .....+... ...|......+...+||.+||..+|.+ ||+++||++||||+..
T Consensus 263 lyell~G~~Pf~~~~~~-~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~Hp~f~~~ 336 (410)
T 3v8s_A 263 LYEMLVGDTPFYADSLV-GTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKND 336 (410)
T ss_dssp HHHHHHSSCTTCCSSHH-HHHHHHHTHHHHCCCCTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTSGGGCCS
T ss_pred HHHHHhCCCCCCCCChh-hHHHHHHhccccccCCCcccccHHHHHHHHHHccChhhhCCCCCHHHHhcCccccCC
Confidence 999999 67665443 333333321 112222233455569999999999988 9999999999999986
No 59
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=2.1e-34 Score=308.42 Aligned_cols=214 Identities=14% Similarity=0.178 Sum_probs=162.5
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004987 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~gI 142 (720)
+..+|..+|.+++||||+++++ ++.... .+++||||.+++|.+++...+..+++..++.++.||+.||.|||++||
T Consensus 46 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i 121 (324)
T 3mtl_A 46 TAIREVSLLKDLKHANIVTLHD-IIHTEK---SLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKV 121 (324)
T ss_dssp CCCCCHHHHSCCCCTTBCCEEE-EEECSS---CEEEEEECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred hHHHHHHHHHhcCCCCCCeeee-EEeeCC---EEEEEecccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 3346888999999999999999 555543 579999997779999997666679999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004987 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.+||+|||.+...+....
T Consensus 122 vH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~---------------------------------------------- 155 (324)
T 3mtl_A 122 LHRDLKPQNLLINERGELKLADFGLARAKSIPTK---------------------------------------------- 155 (324)
T ss_dssp EESSCCGGGEEECTTCCEEECSSSEEECC---------------------------------------------------
T ss_pred cCCCcCHHHEEECCCCCEEEccCcccccccCCcc----------------------------------------------
Confidence 9999999999999999999998888743211100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-CCCCccccchhhhhhh
Q 004987 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLL 301 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~~sDIwSLGvlL 301 (720)
......||++|+|||++.+ ..++.++|||||||++
T Consensus 156 --------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il 191 (324)
T 3mtl_A 156 --------------------------------------------TYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIF 191 (324)
T ss_dssp ---------------------------------------------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHH
T ss_pred --------------------------------------------ccccccCcccccChhhhcCCCCCCcHHHHHHHHHHH
Confidence 0011367999999999987 4589999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhh--cCCCCccc--------------------------cccCchHHHHHHHcCCCCCC
Q 004987 302 FELFC---PFSTGEEKTRTMSSLR--HRVLPPQL--------------------------LLKFPKEASFCLWLLHPEPS 350 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~i~--~~~~p~~~--------------------------~~~~p~~~~Li~~~L~~dP~ 350 (720)
|+|++ ||.............. ....+..+ ....+...+||.+||++||.
T Consensus 192 ~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~ 271 (324)
T 3mtl_A 192 YEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGR 271 (324)
T ss_dssp HHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGG
T ss_pred HHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcc
Confidence 99999 6766544322222111 11111100 11223446999999999999
Q ss_pred CCCChHHHHcCcccCCCccc
Q 004987 351 GRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 351 ~Rpta~eiL~hp~~~~~~~~ 370 (720)
+|||+.|+|+||||......
T Consensus 272 ~R~t~~e~l~hp~f~~~~~~ 291 (324)
T 3mtl_A 272 NRISAEDAMKHPFFLSLGER 291 (324)
T ss_dssp GSCCHHHHTTSGGGGGGCST
T ss_pred cCCCHHHHhcChhhhhcccc
Confidence 99999999999999987543
No 60
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=1.8e-34 Score=307.90 Aligned_cols=212 Identities=16% Similarity=0.179 Sum_probs=162.0
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCC-----CCCCCHHHHHHHHHHHHHHHHHHH
Q 004987 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP-----KRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~~g~sL~~~L~~~-----~~~l~~~~~~~i~~QIl~aL~~LH 138 (720)
..+|..+|.+++|||||++++ ++..+. .+|+||||.+++|.+++... ...+++..++.++.||+.||.|||
T Consensus 50 ~~~E~~~l~~l~hp~iv~~~~-~~~~~~---~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH 125 (317)
T 2pmi_A 50 AIREISLMKELKHENIVRLYD-VIHTEN---KLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCH 125 (317)
T ss_dssp HHHHHHHHTTCCBTTBCCEEE-EECCTT---EEEEEEECCCCBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCcceEEE-EEEECC---eEEEEEEecCCCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHH
Confidence 346888999999999999999 555443 67999999667999999432 235899999999999999999999
Q ss_pred HcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCC
Q 004987 139 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~ 218 (720)
++||+||||||+|||++.++.+||+|||.+...+....
T Consensus 126 ~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~------------------------------------------ 163 (317)
T 2pmi_A 126 ENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVN------------------------------------------ 163 (317)
T ss_dssp HTTEECCCCCGGGEEECTTCCEEECCCSSCEETTSCCC------------------------------------------
T ss_pred HCCeeeCCCChHHeEEcCCCCEEECcCccceecCCCcc------------------------------------------
Confidence 99999999999999999999999999888743321100
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-CCCccccchhh
Q 004987 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRL 297 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~~sDIwSL 297 (720)
......||+.|+|||++.+. .++.++|||||
T Consensus 164 ------------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~Diwsl 195 (317)
T 2pmi_A 164 ------------------------------------------------TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSC 195 (317)
T ss_dssp ------------------------------------------------CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHH
T ss_pred ------------------------------------------------cCCCCcccccccCchHhhCCCCCCcHHHHHHH
Confidence 00113689999999999874 58999999999
Q ss_pred hhhhhhccc---cCCCCchHHHHHHHhhc-CCCCc------------------------------ccc-ccCchHHHHHH
Q 004987 298 GVLLFELFC---PFSTGEEKTRTMSSLRH-RVLPP------------------------------QLL-LKFPKEASFCL 342 (720)
Q Consensus 298 GvlL~eLlt---pf~~~~~~~~~~~~i~~-~~~p~------------------------------~~~-~~~p~~~~Li~ 342 (720)
||++|||++ ||............... +..++ ... ...+...+||.
T Consensus 196 G~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 275 (317)
T 2pmi_A 196 GCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLH 275 (317)
T ss_dssp HHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHH
Confidence 999999999 67655443222211110 00000 000 12234459999
Q ss_pred HcCCCCCCCCCChHHHHcCcccCCCcc
Q 004987 343 WLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 343 ~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
+||++||.+|||+.|+|+||||+....
T Consensus 276 ~~L~~dP~~Rpt~~e~l~hp~f~~~~~ 302 (317)
T 2pmi_A 276 GLLQLNPDMRLSAKQALHHPWFAEYYH 302 (317)
T ss_dssp HHSCSSGGGSCCHHHHTTSGGGGGGCC
T ss_pred HHCCCCcccCCCHHHHhCChhhhcccc
Confidence 999999999999999999999998754
No 61
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=4.9e-35 Score=319.25 Aligned_cols=213 Identities=16% Similarity=0.206 Sum_probs=155.4
Q ss_pred eeeehhhhcccCCCCCceecccceeecC---CCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004987 63 RKHSDGVELTHGDHLRNQGGLSGVCENE---AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~---~~~~~~~lV~E~~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs 139 (720)
+..+|..+|.+++||||+++++ ++... .....+|++||+.+++|.+++.. ..+++..++.++.||+.||.|||+
T Consensus 74 ~~~~E~~~l~~l~hpnIv~~~~-~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~ 150 (367)
T 2fst_X 74 RTYRELRLLKHMKHENVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHS 150 (367)
T ss_dssp HHHHHHHHHHHCCCTTBCCCSE-EECSCSSGGGCCCCEEEEECCCEECC-------CCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCCcEEE-EEecCCccccCCeEEEEecccCCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH
Confidence 4447888999999999999999 55433 12245799999988999998854 349999999999999999999999
Q ss_pred cCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004987 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||+||||||+|||++.++.+||+|||+++..+..
T Consensus 151 ~givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~--------------------------------------------- 185 (367)
T 2fst_X 151 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE--------------------------------------------- 185 (367)
T ss_dssp TTCCCCCCCGGGEEECTTCCEEECC-------------------------------------------------------
T ss_pred CCeeeCCCCHhhEEECCCCCEEEeecccccccccc---------------------------------------------
Confidence 99999999999999999999999888877321100
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-CCCCccccchhhh
Q 004987 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLG 298 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~~sDIwSLG 298 (720)
....+||++|+|||++.+ ..++.++||||||
T Consensus 186 ------------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG 217 (367)
T 2fst_X 186 ------------------------------------------------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVG 217 (367)
T ss_dssp -----------------------------------------------------CCCTTCCHHHHTTCCSCCTTHHHHHHH
T ss_pred ------------------------------------------------CCCcCcCcCccChHHHcCCcCCCchhhHHHHH
Confidence 011478999999999987 5689999999999
Q ss_pred hhhhhccc---cCCCCchHHHHHHHhhc-CCC-----------------------Cc-----cccccCchHHHHHHHcCC
Q 004987 299 VLLFELFC---PFSTGEEKTRTMSSLRH-RVL-----------------------PP-----QLLLKFPKEASFCLWLLH 346 (720)
Q Consensus 299 vlL~eLlt---pf~~~~~~~~~~~~i~~-~~~-----------------------p~-----~~~~~~p~~~~Li~~~L~ 346 (720)
|++|||++ ||.+..........+.. +.. +. .+....+...+||.+||+
T Consensus 218 ~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~ 297 (367)
T 2fst_X 218 CIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 297 (367)
T ss_dssp HHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSC
T ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCC
Confidence 99999999 67665443222211110 000 00 011223445699999999
Q ss_pred CCCCCCCChHHHHcCcccCCCccch
Q 004987 347 PEPSGRPKMGELLQSEFLNEPRDSM 371 (720)
Q Consensus 347 ~dP~~Rpta~eiL~hp~~~~~~~~l 371 (720)
+||.+|||+.|+|+||||.....+.
T Consensus 298 ~dP~~R~t~~e~L~hp~~~~~~~~~ 322 (367)
T 2fst_X 298 LDSDKRITAAQALAHAYFAQYHDPD 322 (367)
T ss_dssp SSGGGSCCHHHHHTSGGGTTTCCGG
T ss_pred CCcccCcCHHHHhcChhhhhccCCC
Confidence 9999999999999999999876544
No 62
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=8.8e-35 Score=317.82 Aligned_cols=204 Identities=18% Similarity=0.219 Sum_probs=159.7
Q ss_pred ehhhh-cccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004987 66 SDGVE-LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~-L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~gIv 143 (720)
+|..+ +..++|||||++++ ++.+.. .+|+|||| .|++|.+++.+.+ .+++..++.++.||+.||.|||++||+
T Consensus 87 ~e~~~ll~~~~hp~Iv~l~~-~~~~~~---~~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~giv 161 (373)
T 2r5t_A 87 SERNVLLKNVKHPFLVGLHF-SFQTAD---KLYFVLDYINGGELFYHLQRER-CFLEPRARFYAAEIASALGYLHSLNIV 161 (373)
T ss_dssp ----CCBCCCCCTTBCCEEE-EEECSS---EEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHhCCCCCCCCEEE-EEEeCC---EEEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCce
Confidence 34334 67799999999999 555543 67999999 8999999995533 499999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004987 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.+|++||+|||+++......
T Consensus 162 HrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~------------------------------------------------ 193 (373)
T 2r5t_A 162 YRDLKPENILLDSQGHIVLTDFGLCKENIEHN------------------------------------------------ 193 (373)
T ss_dssp CCCCCGGGEEECTTSCEEECCCCBCGGGBCCC------------------------------------------------
T ss_pred ecCCCHHHEEECCCCCEEEeeCccccccccCC------------------------------------------------
Confidence 99999999999999999999888873210000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004987 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGvlL~e 303 (720)
......+||+.|+|||++.+..++.++|||||||++||
T Consensus 194 ------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e 231 (373)
T 2r5t_A 194 ------------------------------------------STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYE 231 (373)
T ss_dssp ------------------------------------------CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHH
T ss_pred ------------------------------------------CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHH
Confidence 00012578999999999999999999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCCh----HHHHcCcccCCC
Q 004987 304 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKM----GELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~i~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta----~eiL~hp~~~~~ 367 (720)
|++ ||...... ..+..+....+ .+.... +...+||.+||+.||.+||++ .+|++||||+..
T Consensus 232 ll~G~~Pf~~~~~~-~~~~~i~~~~~--~~~~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~i~~h~~f~~~ 300 (373)
T 2r5t_A 232 MLYGLPPFYSRNTA-EMYDNILNKPL--QLKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSHVFFSLI 300 (373)
T ss_dssp HHHSSCTTCCSBHH-HHHHHHHHSCC--CCCSSSCHHHHHHHHHHTCSSGGGSTTTTTTHHHHHTSGGGTTC
T ss_pred HHcCCCCCCCCCHH-HHHHHHHhccc--CCCCCCCHHHHHHHHHHcccCHHhCCCCCCCHHHHhCCccccCC
Confidence 999 67665444 34444443322 122223 445599999999999999987 699999999976
No 63
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=1.6e-34 Score=312.42 Aligned_cols=206 Identities=18% Similarity=0.275 Sum_probs=160.7
Q ss_pred eehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004987 65 HSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~gI 142 (720)
.+|..++.++ +|||||++++ ++.+.. .+|+|||| .|++|.+++.+.+ .+++..++.++.||+.||.|||++||
T Consensus 57 ~~E~~~l~~~~~hp~iv~l~~-~~~~~~---~~~lv~e~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH~~~i 131 (345)
T 3a8x_A 57 QTEKHVFEQASNHPFLVGLHS-CFQTES---RLFFVIEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALNYLHERGI 131 (345)
T ss_dssp HHHHHHHHHTTTCTTBCCEEE-EEECSS---EEEEEECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhcCCCCccCeEEE-EEEeCC---EEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 3667778776 8999999999 565543 67999999 8999999995433 49999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004987 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.+|++||+|||+++...... +
T Consensus 132 vHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~---------------------------------~------------- 165 (345)
T 3a8x_A 132 IYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG---------------------------------D------------- 165 (345)
T ss_dssp BCCCCCGGGEEECTTSCEEECCGGGCBCSCCTT---------------------------------C-------------
T ss_pred eecCCCHHHEEECCCCCEEEEeccccccccCCC---------------------------------C-------------
Confidence 999999999999999999998888874311000 0
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004987 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGvlL~ 302 (720)
.....+||+.|+|||++.+..++.++|||||||++|
T Consensus 166 --------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ 201 (345)
T 3a8x_A 166 --------------------------------------------TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMF 201 (345)
T ss_dssp --------------------------------------------CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHH
T ss_pred --------------------------------------------cccccCCCccccCccccCCCCCChHHhHHHHHHHHH
Confidence 001147899999999999999999999999999999
Q ss_pred hccc---cCCCC--------chHHHHHHHhhcCCCCccccc-cCchHHHHHHHcCCCCCCCCCCh------HHHHcCccc
Q 004987 303 ELFC---PFSTG--------EEKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPKM------GELLQSEFL 364 (720)
Q Consensus 303 eLlt---pf~~~--------~~~~~~~~~i~~~~~p~~~~~-~~p~~~~Li~~~L~~dP~~Rpta------~eiL~hp~~ 364 (720)
||++ ||... .........+....+. ++. ..+...+||.+||+.||.+||++ .|+++||||
T Consensus 202 ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~--~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~hp~f 279 (345)
T 3a8x_A 202 EMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR--IPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFF 279 (345)
T ss_dssp HHHHSSCTTTTTTC-------CHHHHHHHHHHCCCC--CCTTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTSGGG
T ss_pred HHHhCCCCcCCcccccccccccHHHHHHHHHcCCCC--CCCCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcCCcc
Confidence 9999 56431 1112233333332211 122 33455699999999999999996 799999999
Q ss_pred CCC
Q 004987 365 NEP 367 (720)
Q Consensus 365 ~~~ 367 (720)
+..
T Consensus 280 ~~~ 282 (345)
T 3a8x_A 280 RNV 282 (345)
T ss_dssp TTC
T ss_pred CCC
Confidence 875
No 64
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=6.5e-34 Score=304.39 Aligned_cols=207 Identities=17% Similarity=0.272 Sum_probs=164.9
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004987 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~gIv 143 (720)
.+|..++.+++||||+++++ ++.... ..|+|||| .|++|.+++... .+++..+..++.||+.||.|||++||+
T Consensus 90 ~~E~~~l~~l~h~niv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~--~l~~~~~~~i~~qi~~~L~~LH~~~iv 163 (321)
T 2c30_A 90 FNEVVIMRDYQHFNVVEMYK-SYLVGE---ELWVLMEFLQGGALTDIVSQV--RLNEEQIATVCEAVLQALAYLHAQGVI 163 (321)
T ss_dssp HHHHHHHTTCCCTTBCCEEE-EEEETT---EEEEEECCCCSCBHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHhCCCCCcceEEE-EEEECC---EEEEEEecCCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 36788999999999999999 554443 57999999 899999998543 499999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004987 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.+||+|||++........
T Consensus 164 H~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~----------------------------------------------- 196 (321)
T 2c30_A 164 HRDIKSDSILLTLDGRVKLSDFGFCAQISKDVP----------------------------------------------- 196 (321)
T ss_dssp CCCCSGGGEEECTTCCEEECCCTTCEECCSSSC-----------------------------------------------
T ss_pred cCCCCHHHEEECCCCcEEEeeeeeeeecccCcc-----------------------------------------------
Confidence 999999999999999999998887743211100
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004987 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGvlL~e 303 (720)
......||+.|+|||++.+..++.++|||||||++||
T Consensus 197 -------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~e 233 (321)
T 2c30_A 197 -------------------------------------------KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIE 233 (321)
T ss_dssp -------------------------------------------CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHH
T ss_pred -------------------------------------------ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHH
Confidence 0011468999999999999889999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCCCcc-cc-ccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004987 304 LFC---PFSTGEEKTRTMSSLRHRVLPPQ-LL-LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~i~~~~~p~~-~~-~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
|++ ||...... ..+..+.....+.. .. ...+...+|+.+||+.||.+|||+.|+|+||||....
T Consensus 234 l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~~~ 302 (321)
T 2c30_A 234 MVDGEPPYFSDSPV-QAMKRLRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQERATAQELLDHPFLLQTG 302 (321)
T ss_dssp HHHSSCTTTTSCHH-HHHHHHHHSSCCCCTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGGGCC
T ss_pred HHhCCCCCCCCCHH-HHHHHHhcCCCCCcCccccCCHHHHHHHHHHccCChhhCcCHHHHhcChhhccCC
Confidence 999 66554443 33444443332221 11 2234456999999999999999999999999998753
No 65
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=1.5e-34 Score=310.23 Aligned_cols=209 Identities=17% Similarity=0.206 Sum_probs=156.9
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004987 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~gIv 143 (720)
..+|..+|.+++||||+++++ ++.... .+|+||||.+++|.+++.... .+++.+++.++.||+.||.|||++||+
T Consensus 80 ~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~L~~~~~~~~-~~~~~~~~~i~~ql~~~l~~LH~~~iv 154 (329)
T 3gbz_A 80 AIREVSLLKELQHRNIIELKS-VIHHNH---RLHLIFEYAENDLKKYMDKNP-DVSMRVIKSFLYQLINGVNFCHSRRCL 154 (329)
T ss_dssp CHHHHHHGGGCCCTTBCCEEE-EEEETT---EEEEEEECCSEEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHcCCCCcceEEE-EEecCC---EEEEEEecCCCCHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHhCCEE
Confidence 347888999999999999999 555543 679999996679999996544 499999999999999999999999999
Q ss_pred eccCCCCcEEEc-----cCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCC
Q 004987 144 VHNVRPSCFVMS-----SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 144 HrDLKP~NILl~-----~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~ 218 (720)
||||||+|||++ ..+.+||+|||.+...+....
T Consensus 155 H~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~~~~------------------------------------------ 192 (329)
T 3gbz_A 155 HRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIR------------------------------------------ 192 (329)
T ss_dssp CSCCCGGGEEEEC-----CCEEEECCTTHHHHHC----------------------------------------------
T ss_pred CCCCCHHHEEEecCCCCccceEEECcCCCccccCCccc------------------------------------------
Confidence 999999999995 444599988887733211100
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC-CCccccchhh
Q 004987 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRL 297 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~-~s~~sDIwSL 297 (720)
......||+.|+|||++.+.. ++.++|||||
T Consensus 193 ------------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~Diwsl 224 (329)
T 3gbz_A 193 ------------------------------------------------QFTHEIITLWYRPPEILLGSRHYSTSVDIWSI 224 (329)
T ss_dssp -------------------------------------------------------CCTTCCHHHHTTCCCCCTHHHHHHH
T ss_pred ------------------------------------------------ccCCCcCCccccCHHHhcCCCCCCcHHHHHHH
Confidence 001146799999999998755 8999999999
Q ss_pred hhhhhhccc---cCCCCchHHHHHHHhhcCCCCcc---------------------------ccc-cCchHHHHHHHcCC
Q 004987 298 GVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQ---------------------------LLL-KFPKEASFCLWLLH 346 (720)
Q Consensus 298 GvlL~eLlt---pf~~~~~~~~~~~~i~~~~~p~~---------------------------~~~-~~p~~~~Li~~~L~ 346 (720)
||++|||++ ||............+.....|+. +.. ..+...+||.+||+
T Consensus 225 G~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~ 304 (329)
T 3gbz_A 225 ACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLE 304 (329)
T ss_dssp HHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTC
T ss_pred HHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHcc
Confidence 999999999 67665544333333221111110 000 12344599999999
Q ss_pred CCCCCCCChHHHHcCcccCCC
Q 004987 347 PEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 347 ~dP~~Rpta~eiL~hp~~~~~ 367 (720)
+||.+|||+.|+|+||||+..
T Consensus 305 ~dP~~R~t~~e~l~hp~f~~~ 325 (329)
T 3gbz_A 305 MDPVKRISAKNALEHPYFSHN 325 (329)
T ss_dssp SSGGGSCCHHHHHTSGGGSSS
T ss_pred CChhhCCCHHHHhCCcccCCC
Confidence 999999999999999999975
No 66
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=3.5e-34 Score=300.73 Aligned_cols=208 Identities=17% Similarity=0.224 Sum_probs=159.0
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHH
Q 004987 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~---~~~~l~~~~~~~i~~QIl~aL~~LH 138 (720)
+..+|..+|.+++||||+++++ ++.+.. .+|+|||| .|++|.+++.. .+..+++..++.++.||+.||.|||
T Consensus 66 ~~~~E~~~l~~l~hp~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH 141 (285)
T 3is5_A 66 QIEAEIEVLKSLDHPNIIKIFE-VFEDYH---NMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH 141 (285)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEE-EEECSS---EEEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCchHHhHHH-heecCC---eEEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHH
Confidence 3447888999999999999999 555443 57999999 88999999832 2355999999999999999999999
Q ss_pred HcCceeccCCCCcEEEc---cCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccC
Q 004987 139 SQGIVVHNVRPSCFVMS---SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 215 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~---~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~ 215 (720)
++||+||||||+|||++ .++.++|+|||.+.......
T Consensus 142 ~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~~---------------------------------------- 181 (285)
T 3is5_A 142 SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDE---------------------------------------- 181 (285)
T ss_dssp HTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC---------------------------------------------
T ss_pred hCCEEECCCCHHHEEEecCCCCCCEEEEeeecceecCCcc----------------------------------------
Confidence 99999999999999994 56789998888774321110
Q ss_pred CCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccch
Q 004987 216 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIY 295 (720)
Q Consensus 216 ~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIw 295 (720)
......||+.|+|||++.+ .++.++|||
T Consensus 182 ---------------------------------------------------~~~~~~~t~~y~aPE~~~~-~~~~~~Di~ 209 (285)
T 3is5_A 182 ---------------------------------------------------HSTNAAGTALYMAPEVFKR-DVTFKCDIW 209 (285)
T ss_dssp --------------------------------------------------------CTTGGGCCHHHHTT-CCCHHHHHH
T ss_pred ---------------------------------------------------cCcCcccccCcCChHHhcc-CCCcccCee
Confidence 0011468999999999864 589999999
Q ss_pred hhhhhhhhccc---cCCCCchHHHHHHHhh-cCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCC
Q 004987 296 RLGVLLFELFC---PFSTGEEKTRTMSSLR-HRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 366 (720)
Q Consensus 296 SLGvlL~eLlt---pf~~~~~~~~~~~~i~-~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~ 366 (720)
||||++|||++ ||.............. ....+.......+...+|+.+||++||.+|||+.|+|+||||++
T Consensus 210 slG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~f~~ 284 (285)
T 3is5_A 210 SAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRPLTPQAVDLLKQMLTKDPERRPSAAQVLHHEWFKQ 284 (285)
T ss_dssp HHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCC--CCCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGGC
T ss_pred hHHHHHHHHHhCCCCCCCCCHHHHHhhhccCCcccccccCcCCHHHHHHHHHHccCChhhCcCHHHHhcCHHhhc
Confidence 99999999999 6765543322222221 22222222334456669999999999999999999999999985
No 67
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=1e-34 Score=313.37 Aligned_cols=213 Identities=18% Similarity=0.269 Sum_probs=161.7
Q ss_pred eeehhhhcccCCC--CCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004987 64 KHSDGVELTHGDH--LRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 64 ~~~e~~~L~~l~H--pnIV~l~~~~~~~~~~~~~~~lV~E~~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~g 141 (720)
..+|..+|.++.| |||+++++ ++..+. .+|+|||+.+++|.+++... ..+++.+++.++.||+.||.|||++|
T Consensus 54 ~~~E~~~l~~l~~~~~~iv~~~~-~~~~~~---~~~lv~e~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~al~~lH~~~ 128 (343)
T 3dbq_A 54 YRNEIAYLNKLQQHSDKIIRLYD-YEITDQ---YIYMVMECGNIDLNSWLKKK-KSIDPWERKSYWKNMLEAVHTIHQHG 128 (343)
T ss_dssp HHHHHHHHHHHTTTCTTBCCEEE-EEECSS---EEEEEECCCSEEHHHHHHHS-CCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhhhhcCCceEEEee-eEeeCC---EEEEEEeCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3467788888877 99999999 555443 68999999899999999654 35999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004987 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++ ++.+||+|||++.........
T Consensus 129 iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~~-------------------------------------------- 163 (343)
T 3dbq_A 129 IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS-------------------------------------------- 163 (343)
T ss_dssp CCCCCCCGGGEEEE-TTEEEECCCSSSCCC--------------------------------------------------
T ss_pred eecCCCCcceEEEE-CCcEEEeecccccccCccccc--------------------------------------------
Confidence 99999999999996 688999988887443211000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-----------CCCCc
Q 004987 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-----------APVSC 290 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-----------~~~s~ 290 (720)
......+||+.|+|||++.+ ..++.
T Consensus 164 --------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~ 199 (343)
T 3dbq_A 164 --------------------------------------------VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISP 199 (343)
T ss_dssp --------------------------------------------------CCCCSSCCHHHHHHCC-----------CCH
T ss_pred --------------------------------------------ccCCCCcCCcCcCCHHHHhhccccccccccccCCCc
Confidence 00011478999999999864 55899
Q ss_pred cccchhhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCC
Q 004987 291 ASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNE 366 (720)
Q Consensus 291 ~sDIwSLGvlL~eLlt---pf~~~~~~~~~~~~i~~~~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~ 366 (720)
++|||||||++|||++ ||.........+..+........+....+ ...+|+.+||++||.+|||+.|+|+||||+.
T Consensus 200 ~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~~~~ 279 (343)
T 3dbq_A 200 KSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQI 279 (343)
T ss_dssp HHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHS
T ss_pred hhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHhcCCcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCccccc
Confidence 9999999999999999 66554343333444433333333333344 4559999999999999999999999999987
Q ss_pred Cccc
Q 004987 367 PRDS 370 (720)
Q Consensus 367 ~~~~ 370 (720)
...+
T Consensus 280 ~~~~ 283 (343)
T 3dbq_A 280 QTHP 283 (343)
T ss_dssp CCC-
T ss_pred cCCc
Confidence 6543
No 68
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=2.8e-34 Score=321.29 Aligned_cols=208 Identities=17% Similarity=0.241 Sum_probs=160.7
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH-c
Q 004987 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-Q 140 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs-~ 140 (720)
+..+|..+|..++||||+++++ ++.... .+|+|||| .|++|.+++.... .+++..++.++.||+.||.|||+ +
T Consensus 194 ~~~~e~~~l~~l~h~~iv~l~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~ 268 (446)
T 4ejn_A 194 HTLTENRVLQNSRHPFLTALKY-SFQTHD---RLCFVMEYANGGELFFHLSRER-VFSEDRARFYGAEIVSALDYLHSEK 268 (446)
T ss_dssp -------CCCCCSCTTSCCEEE-EEEETT---EEEEEECCCSSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCCCCeEeeEEE-EEeeCC---EEEEEEeeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHhhcC
Confidence 3446777999999999999999 555543 57999999 8999999995443 49999999999999999999998 9
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004987 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+|||++.++.+||+|||++........
T Consensus 269 giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~-------------------------------------------- 304 (446)
T 4ejn_A 269 NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA-------------------------------------------- 304 (446)
T ss_dssp CCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC-----------------------------------------------
T ss_pred CEEECCCCHHHEEECCCCCEEEccCCCceeccCCCc--------------------------------------------
Confidence 999999999999999999999998888743211100
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhh
Q 004987 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
.....+||+.|+|||++.+..++.++|||||||+
T Consensus 305 ----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~i 338 (446)
T 4ejn_A 305 ----------------------------------------------TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVV 338 (446)
T ss_dssp ------------------------------------------------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHH
T ss_pred ----------------------------------------------ccccccCCccccCHhhcCCCCCCCccchhhhHHH
Confidence 0011478999999999999999999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC
Q 004987 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 367 (720)
Q Consensus 301 L~eLlt---pf~~~~~~~~~~~~i~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~ 367 (720)
+|||++ ||...... .....+....++ ......+...+||.+||++||.+|| ++.|+|+||||+..
T Consensus 339 l~ell~g~~Pf~~~~~~-~~~~~i~~~~~~-~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~hp~f~~~ 411 (446)
T 4ejn_A 339 MYEMMCGRLPFYNQDHE-KLFELILMEEIR-FPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGI 411 (446)
T ss_dssp HHHHHHSSCSSCCSSHH-HHHHHHHHCCCC-CCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTC
T ss_pred HHHHhhCCCCCCCCCHH-HHHHHHHhCCCC-CCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhCccccCC
Confidence 999999 77665443 333333322211 0112234556999999999999999 99999999999986
No 69
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=6.2e-34 Score=306.51 Aligned_cols=203 Identities=24% Similarity=0.326 Sum_probs=160.7
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCC-CHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004987 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDV-SLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~-sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~ 140 (720)
+..+|..+|.+++||||+++++ ++.... .+++|||| .++ +|.+++.... .+++..++.++.||+.||.|||++
T Consensus 75 ~~~~E~~~l~~l~h~~Iv~~~~-~~~~~~---~~~lv~e~~~~g~~l~~~~~~~~-~l~~~~~~~i~~qi~~~L~~LH~~ 149 (335)
T 3dls_A 75 KVTLEIAILSRVEHANIIKVLD-IFENQG---FFQLVMEKHGSGLDLFAFIDRHP-RLDEPLASYIFRQLVSAVGYLRLK 149 (335)
T ss_dssp EEEHHHHHHTTCCCTTBCCEEE-EEECSS---EEEEEEECCTTSCBHHHHHHTCC-CCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCCCCCEeeEEE-EEeeCC---EEEEEEEeCCCCccHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC
Confidence 4557888999999999999999 565543 67999998 444 9999996544 499999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004987 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+|||++.++.+||+|||++.......
T Consensus 150 ~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~--------------------------------------------- 184 (335)
T 3dls_A 150 DIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGK--------------------------------------------- 184 (335)
T ss_dssp TEECSCCSGGGEEECTTSCEEECCCTTCEECCTTC---------------------------------------------
T ss_pred CeEEeccCHHHEEEcCCCcEEEeecccceECCCCC---------------------------------------------
Confidence 99999999999999999999999888874321110
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCC-Cccccchhhhh
Q 004987 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYRLGV 299 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~-s~~sDIwSLGv 299 (720)
......||+.|+|||++.+..+ +.++|||||||
T Consensus 185 ----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~ 218 (335)
T 3dls_A 185 ----------------------------------------------LFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGV 218 (335)
T ss_dssp ----------------------------------------------CBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHH
T ss_pred ----------------------------------------------ceeccCCCccccChhhhcCCCCCCCcccchhHHH
Confidence 0011468999999999998886 88999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004987 300 LLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 300 lL~eLlt---pf~~~~~~~~~~~~i~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
++|+|++ ||...... ......++. ...+...+||.+||++||.+|||+.++|+||||+....
T Consensus 219 il~el~~g~~pf~~~~~~------~~~~~~~~~--~~~~~l~~li~~~L~~dP~~Rps~~ell~hp~~~~~~~ 283 (335)
T 3dls_A 219 TLYTLVFEENPFCELEET------VEAAIHPPY--LVSKELMSLVSGLLQPVPERRTTLEKLVTDPWVTQPVN 283 (335)
T ss_dssp HHHHHHHSSCSCSSGGGG------TTTCCCCSS--CCCHHHHHHHHHHTCSSGGGSCCHHHHHHCTTTTCCCC
T ss_pred HHHHHHhCCCchhhHHHH------HhhccCCCc--ccCHHHHHHHHHHccCChhhCcCHHHHhcCccccCCcc
Confidence 9999999 55432211 111111211 12345569999999999999999999999999988643
No 70
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=7.8e-34 Score=303.31 Aligned_cols=208 Identities=18% Similarity=0.258 Sum_probs=165.7
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004987 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~gI 142 (720)
..+|..++.+++||||+++++ ++.... .+|+|||| .|++|.+++... ..+++..++.++.||+.||.|||++||
T Consensus 62 ~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~lH~~~i 136 (321)
T 2a2a_A 62 IEREVSILRQVLHHNVITLHD-VYENRT---DVVLILELVSGGELFDFLAQK-ESLSEEEATSFIKQILDGVNYLHTKKI 136 (321)
T ss_dssp HHHHHHHHHHCCCTTBCCEEE-EEECSS---EEEEEECCCCSCBHHHHHHTC-SCEEHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHhCCCCCcceEEE-EEecCC---EEEEEEEcCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 347788999999999999999 555443 57999999 799999999654 359999999999999999999999999
Q ss_pred eeccCCCCcEEEccCC----ceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCC
Q 004987 143 VVHNVRPSCFVMSSFN----HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 143 vHrDLKP~NILl~~~~----~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~ 218 (720)
+||||||+|||++.++ .++|+|||.+.......
T Consensus 137 vH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~~~~~------------------------------------------- 173 (321)
T 2a2a_A 137 AHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV------------------------------------------- 173 (321)
T ss_dssp ECCCCSGGGEEESCTTSSSCCEEECCCTTCEECCTTC-------------------------------------------
T ss_pred ecCCCChHHEEEecCCCCcCCEEEccCccceecCccc-------------------------------------------
Confidence 9999999999999887 79998888773321110
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhh
Q 004987 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
......||+.|+|||++.+..++.++||||||
T Consensus 174 ------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG 205 (321)
T 2a2a_A 174 ------------------------------------------------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIG 205 (321)
T ss_dssp ------------------------------------------------CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHH
T ss_pred ------------------------------------------------cccccCCCCCccCcccccCCCCCCccccHHHH
Confidence 00113689999999999998899999999999
Q ss_pred hhhhhccc---cCCCCchHHHHHHHhhcC--CCCccccccCch-HHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004987 299 VLLFELFC---PFSTGEEKTRTMSSLRHR--VLPPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 299 vlL~eLlt---pf~~~~~~~~~~~~i~~~--~~p~~~~~~~p~-~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
|++|+|++ ||...... .....+... .+++......+. ..+||.+||++||.+|||+.|+|+||||+...
T Consensus 206 ~il~~l~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~hp~~~~~~ 280 (321)
T 2a2a_A 206 VITYILLSGASPFLGDTKQ-ETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVD 280 (321)
T ss_dssp HHHHHHHHSCCSSCCSSHH-HHHHHHHTTCCCCCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHSTTTSCSS
T ss_pred HHHHHHHHCCCCCCCCCHH-HHHHHHHhcccccChhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhcCccccCCC
Confidence 99999999 67655443 333334332 233333334444 45999999999999999999999999998763
No 71
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=2.2e-34 Score=314.78 Aligned_cols=208 Identities=18% Similarity=0.195 Sum_probs=165.1
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004987 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~gIv 143 (720)
.+|..+|.+++|||||++++ ++.... .+|+|||| .|++|.+++......+++.+++.++.||+.||.|||++||+
T Consensus 134 ~~E~~~l~~l~hpnIv~~~~-~~~~~~---~~~lv~E~~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iv 209 (373)
T 2x4f_A 134 KNEISVMNQLDHANLIQLYD-AFESKN---DIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYIL 209 (373)
T ss_dssp HHHHHHHTTCCCTTBCCEEE-EEECSS---EEEEEEECCTTCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHhCCCCCCCeEEE-EEEECC---EEEEEEeCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 37888999999999999999 555543 57999999 89999999965555699999999999999999999999999
Q ss_pred eccCCCCcEEE--ccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004987 144 VHNVRPSCFVM--SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 144 HrDLKP~NILl--~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
||||||+|||+ +..+.+||+|||++.......
T Consensus 210 H~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~---------------------------------------------- 243 (373)
T 2x4f_A 210 HLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE---------------------------------------------- 243 (373)
T ss_dssp CCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC----------------------------------------------
T ss_pred cccCCHHHEEEecCCCCcEEEEeCCCceecCCcc----------------------------------------------
Confidence 99999999999 466789998888774321110
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004987 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGvlL 301 (720)
.....+||+.|+|||++.+..++.++|||||||++
T Consensus 244 ---------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il 278 (373)
T 2x4f_A 244 ---------------------------------------------KLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIA 278 (373)
T ss_dssp ---------------------------------------------BCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHH
T ss_pred ---------------------------------------------ccccccCCCcEeChhhccCCCCCcHHhHHHHHHHH
Confidence 00113689999999999988899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcC-CCCccc-cccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004987 302 FELFC---PFSTGEEKTRTMSSLRHR-VLPPQL-LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~i~~~-~~p~~~-~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|||++ ||............+... .+++.. ....+...+||.+||++||.+|||+.|+|+||||...
T Consensus 279 ~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~hp~~~~~ 349 (373)
T 2x4f_A 279 YMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFISKLLIKEKSWRISASEALKHPWLSDH 349 (373)
T ss_dssp HHHHHSSCTTCCSSHHHHHHHHHHTCCCSCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHCH
T ss_pred HHHHhCCCCCCCCCHHHHHHHHHhccCCCChhhhccCCHHHHHHHHHHcCCChhhCCCHHHHhcCcCcCCC
Confidence 99999 676655443332222221 222222 2334455699999999999999999999999999875
No 72
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=9.8e-35 Score=321.35 Aligned_cols=207 Identities=21% Similarity=0.277 Sum_probs=161.6
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004987 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~gIvH 144 (720)
+|..+|..++||||+++++ ++++.. .+|+|||| .|++|.++|.+.+..+++..++.++.||+.||.|||++||||
T Consensus 110 ~E~~il~~~~hp~Iv~l~~-~~~~~~---~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~giiH 185 (412)
T 2vd5_A 110 EERDVLVNGDRRWITQLHF-AFQDEN---YLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVH 185 (412)
T ss_dssp HHHHHHHHSCTTTBCCEEE-EEECSS---EEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhcCCCCeeeEEE-EEeeCC---EEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeee
Confidence 5666888999999999999 665553 67999999 899999999665556999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004987 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+|||++.+|++||+|||++........
T Consensus 186 rDLKp~NILld~~g~vkL~DFGla~~~~~~~~------------------------------------------------ 217 (412)
T 2vd5_A 186 RDIKPDNILLDRCGHIRLADFGSCLKLRADGT------------------------------------------------ 217 (412)
T ss_dssp CCCSGGGEEECTTSCEEECCCTTCEECCTTSC------------------------------------------------
T ss_pred cccCHHHeeecCCCCEEEeechhheeccCCCc------------------------------------------------
Confidence 99999999999999999998888743211100
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCcccc-------CCCCCccccchhh
Q 004987 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-------GAPVSCASDIYRL 297 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~-------~~~~s~~sDIwSL 297 (720)
......+||+.|+|||++. +..|+.++|||||
T Consensus 218 -----------------------------------------~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSl 256 (412)
T 2vd5_A 218 -----------------------------------------VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWAL 256 (412)
T ss_dssp -----------------------------------------EECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHH
T ss_pred -----------------------------------------cccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHH
Confidence 0001147999999999997 3458999999999
Q ss_pred hhhhhhccc---cCCCCchHHHHHHHhhc----CCCCccccccCchHHHHHHHcCCCCCCCC---CChHHHHcCcccCCC
Q 004987 298 GVLLFELFC---PFSTGEEKTRTMSSLRH----RVLPPQLLLKFPKEASFCLWLLHPEPSGR---PKMGELLQSEFLNEP 367 (720)
Q Consensus 298 GvlL~eLlt---pf~~~~~~~~~~~~i~~----~~~p~~~~~~~p~~~~Li~~~L~~dP~~R---pta~eiL~hp~~~~~ 367 (720)
||++|||++ ||...... ..+..+.+ ..+|.......+...+||.+||. +|.+| |+++||++||||+..
T Consensus 257 GvilyelltG~~Pf~~~~~~-~~~~~i~~~~~~~~~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hpff~~i 334 (412)
T 2vd5_A 257 GVFAYEMFYGQTPFYADSTA-ETYGKIVHYKEHLSLPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTHPFFFGL 334 (412)
T ss_dssp HHHHHHHHHSSCTTCCSSHH-HHHHHHHTHHHHCCCC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTSGGGTTC
T ss_pred hHHHHHHHhCCCCCCCCCHH-HHHHHHHhcccCcCCCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcCCCcCCC
Confidence 999999999 67665443 33333322 22232222233445599999999 99998 599999999999876
No 73
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=2.6e-34 Score=300.65 Aligned_cols=211 Identities=19% Similarity=0.215 Sum_probs=165.3
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004987 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~g 141 (720)
+..+|..++.+++||||+++++ ++.... ..++|||| .|++|.+++... ..+++..++.++.||+.||.|||++|
T Consensus 51 ~~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~~v~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~ 125 (284)
T 3kk8_A 51 KLEREARICRKLQHPNIVRLHD-SIQEES---FHYLVFDLVTGGELFEDIVAR-EFYSEADASHCIQQILESIAYCHSNG 125 (284)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EEECSS---EEEEEECCCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCCCcCeEEE-EEEcCC---EEEEEEecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3447888999999999999999 555443 57999999 889999988543 34999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCc---eEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCC
Q 004987 142 IVVHNVRPSCFVMSSFNH---VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~---vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~ 218 (720)
|+||||||+||+++.++. ++|+|||.+...+...
T Consensus 126 i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~------------------------------------------- 162 (284)
T 3kk8_A 126 IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE------------------------------------------- 162 (284)
T ss_dssp EECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSSC-------------------------------------------
T ss_pred cCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccCc-------------------------------------------
Confidence 999999999999986655 9998888773321110
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhh
Q 004987 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
......||+.|+|||++.+..++.++||||||
T Consensus 163 ------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG 194 (284)
T 3kk8_A 163 ------------------------------------------------AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACG 194 (284)
T ss_dssp ------------------------------------------------BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHH
T ss_pred ------------------------------------------------cccCCCCCcCCcCchhhcCCCCCcccchHHHH
Confidence 00114689999999999999999999999999
Q ss_pred hhhhhccc---cCCCCchHHHHHHHhhcCC--CCccc-cccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCccc
Q 004987 299 VLLFELFC---PFSTGEEKTRTMSSLRHRV--LPPQL-LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 299 vlL~eLlt---pf~~~~~~~~~~~~i~~~~--~p~~~-~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
|++|+|++ ||...... .....+.... .+... ....+...+|+.+||++||.+|||+.|+|+||||+.....
T Consensus 195 ~~l~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~~ 271 (284)
T 3kk8_A 195 VILYILLVGYPPFWDEDQH-RLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNRERV 271 (284)
T ss_dssp HHHHHHHHSSCSSCCSSHH-HHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTSHHHHSCCCG
T ss_pred HHHHHHHHCCCCCCCCchh-HHHHHHHhccccCCchhhcccCHHHHHHHHHHcccChhhCCCHHHHhcCccccCChhH
Confidence 99999999 66555443 3333333322 22222 2334455699999999999999999999999999887443
No 74
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=4.9e-34 Score=300.45 Aligned_cols=227 Identities=22% Similarity=0.306 Sum_probs=167.0
Q ss_pred eehhhhcccCCCCCceecccceeecC---------CCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHH
Q 004987 65 HSDGVELTHGDHLRNQGGLSGVCENE---------AAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIV 134 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~---------~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL 134 (720)
.+|..++.+++||||+++++.+.... .....+|+|||| .|++|.+++......+++.+++.++.||+.||
T Consensus 50 ~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l 129 (303)
T 1zy4_A 50 LSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEAL 129 (303)
T ss_dssp HHHHHHHTTCCCTTBCCEEEEEEECCCCCC------CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcccccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHH
Confidence 36888999999999999999443321 123468999999 78999999976555689999999999999999
Q ss_pred HHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccccccccccc
Q 004987 135 YAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVT 214 (720)
Q Consensus 135 ~~LHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~ 214 (720)
.|||++||+||||||+|||++.++.++|+|||.+......... ..+.
T Consensus 130 ~~LH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~------------------------------~~~~--- 176 (303)
T 1zy4_A 130 SYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDI------------------------------LKLD--- 176 (303)
T ss_dssp HHHHHTTCCCSCCCGGGEEECTTSCEEECCCCCCSCTTC-----------------------------------------
T ss_pred HHHHhCCeecccCCHHhEEEcCCCCEEEeeCcchhhcccccch------------------------------hccc---
Confidence 9999999999999999999999999999999988543221000 0000
Q ss_pred CCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-CCCcccc
Q 004987 215 APTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASD 293 (720)
Q Consensus 215 ~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~~sD 293 (720)
. . .. ...........||+.|+|||++.+. .++.++|
T Consensus 177 --~-------~--------------------~~--------------~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~D 213 (303)
T 1zy4_A 177 --S-------Q--------------------NL--------------PGSSDNLTSAIGTAMYVATEVLDGTGHYNEKID 213 (303)
T ss_dssp ------------------------------------------------------------CTTSCHHHHTSCSCCCTHHH
T ss_pred --c-------c--------------------cc--------------cccccccccCCCcccccCcccccCCCCCcchhh
Confidence 0 0 00 0000001124789999999999865 5899999
Q ss_pred chhhhhhhhhccccCCCCchHHHHHHHhhcC--CCCccccccCch-HHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004987 294 IYRLGVLLFELFCPFSTGEEKTRTMSSLRHR--VLPPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 294 IwSLGvlL~eLltpf~~~~~~~~~~~~i~~~--~~p~~~~~~~p~-~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
||||||++|||++||............+... .+|+.+....+. ..+|+.+||++||.+|||+.++|+||||...
T Consensus 214 i~slG~il~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~ 290 (303)
T 1zy4_A 214 MYSLGIIFFEMIYPFSTGMERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPVK 290 (303)
T ss_dssp HHHHHHHHHHHHSCCSSHHHHHHHHHHHHSTTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHSSCSCCC
T ss_pred HHHHHHHHHHHHhccCCchhHHHHHHhccccccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCCCCcCCC
Confidence 9999999999999988765554555555432 344444444444 4599999999999999999999999999875
No 75
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=2e-34 Score=301.05 Aligned_cols=223 Identities=15% Similarity=0.126 Sum_probs=153.5
Q ss_pred eeeehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC---CCCCCHHHHHHHHHHHHHHHHHH
Q 004987 63 RKHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---KRSVDVYECLHIFRQIVEIVYAA 137 (720)
Q Consensus 63 r~~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~---~~~l~~~~~~~i~~QIl~aL~~L 137 (720)
+..+|...+..+ +||||+++++ ++.... .+++|||| .|++|.+++... ...+++.+++.++.||+.||.||
T Consensus 56 ~~~~e~~~~~~l~~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~l 131 (289)
T 1x8b_A 56 NALREVYAHAVLGQHSHVVRYFS-AWAEDD---HMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYI 131 (289)
T ss_dssp HHHHHHHHHHHSCSCTTBCCEEE-EEEETT---EEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCeeeeee-eeecCC---eEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHH
Confidence 444677778887 9999999999 554443 67999999 789999999432 24589999999999999999999
Q ss_pred HHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCC
Q 004987 138 HSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 138 Hs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~ 217 (720)
|++||+||||||+|||++.++...+.+.... ..++......++++|||.+....
T Consensus 132 H~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~kl~Dfg~~~~~~ 185 (289)
T 1x8b_A 132 HSMSLVHMDIKPSNIFISRTSIPNAASEEGD--------------------------EDDWASNKVMFKIGDLGHVTRIS 185 (289)
T ss_dssp HHTTEECSCCSGGGEEEC----------------------------------------------CCCEEECCCTTCEETT
T ss_pred HhCCEeecCCCHHHEEEcCCCCCcccccccc--------------------------cccccCCceEEEEcccccccccC
Confidence 9999999999999999997664443221110 00111122235556666554221
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-CCCccccchh
Q 004987 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYR 296 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~~sDIwS 296 (720)
.. ....||+.|+|||++.+. .++.++||||
T Consensus 186 ~~-------------------------------------------------~~~~gt~~y~aPE~~~~~~~~~~~~Di~s 216 (289)
T 1x8b_A 186 SP-------------------------------------------------QVEEGDSRFLANEVLQENYTHLPKADIFA 216 (289)
T ss_dssp CS-------------------------------------------------CCCCCCGGGCCHHHHTTCCTTHHHHHHHH
T ss_pred Cc-------------------------------------------------cccCCCccccChhHhcCCCCCCchhhHHH
Confidence 10 013579999999999876 4778999999
Q ss_pred hhhhhhhcccc--CCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004987 297 LGVLLFELFCP--FSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 297 LGvlL~eLltp--f~~~~~~~~~~~~i~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|||++|+|+++ +..... ....+.....+.......+...+|+.+||++||.+|||+.|+|+||||...
T Consensus 217 lG~il~~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~ 286 (289)
T 1x8b_A 217 LALTVVCAAGAEPLPRNGD---QWHEIRQGRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLLSA 286 (289)
T ss_dssp HHHHHHHHTTCCCCCSSSH---HHHHHHTTCCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTCTTC---
T ss_pred HHHHHHHHhcCCCCCcchh---HHHHHHcCCCCCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhhChHhhhh
Confidence 99999999993 332222 233344444443333334555699999999999999999999999999875
No 76
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=1.6e-34 Score=317.77 Aligned_cols=212 Identities=18% Similarity=0.265 Sum_probs=160.7
Q ss_pred eeehhhhcccCC--CCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004987 64 KHSDGVELTHGD--HLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 64 ~~~e~~~L~~l~--HpnIV~l~~~~~~~~~~~~~~~lV~E~~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~g 141 (720)
..+|..+|.++. |||||++++ ++.... .+|+|||+.+++|.+++.... .+++.+++.++.||+.||.|||++|
T Consensus 101 ~~~Ei~~l~~l~~~~~~iv~~~~-~~~~~~---~~~lv~E~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH~~~ 175 (390)
T 2zmd_A 101 YRNEIAYLNKLQQHSDKIIRLYD-YEITDQ---YIYMVMECGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQHG 175 (390)
T ss_dssp HHHHHHHHHHHTTTCTTBCCEEE-EEECSS---EEEEEEECCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHcccCCCeEEEEEE-EEecCC---EEEEEEecCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 346777888886 599999999 554443 589999999899999996544 5899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004987 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++ ++.+||+|||++.........
T Consensus 176 ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~~-------------------------------------------- 210 (390)
T 2zmd_A 176 IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS-------------------------------------------- 210 (390)
T ss_dssp CCCCCCCGGGEEES-SSCEEECCCSSSCCC--------------------------------------------------
T ss_pred eeecCCCHHHEEEE-CCeEEEEecCccccccCCCcc--------------------------------------------
Confidence 99999999999995 689999988887433211000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-----------CCCCc
Q 004987 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-----------APVSC 290 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-----------~~~s~ 290 (720)
......+||+.|+|||++.+ ..++.
T Consensus 211 --------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~ 246 (390)
T 2zmd_A 211 --------------------------------------------VVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISP 246 (390)
T ss_dssp -----------------------------------------------CCSCCCGGGCCHHHHHCC------------CCH
T ss_pred --------------------------------------------ccCCCCCcCCCccChHHhhhccccccccccccCCCC
Confidence 00011478999999999975 35899
Q ss_pred cccchhhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCC
Q 004987 291 ASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNE 366 (720)
Q Consensus 291 ~sDIwSLGvlL~eLlt---pf~~~~~~~~~~~~i~~~~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~ 366 (720)
++|||||||+||||++ ||.........+..+........+....+ ...+||.+||..||.+|||+.|+|+||||+.
T Consensus 247 ~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~ 326 (390)
T 2zmd_A 247 KSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQI 326 (390)
T ss_dssp HHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHS
T ss_pred hhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHHhCccccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhhCcCccc
Confidence 9999999999999999 66654333333444443333333333333 4559999999999999999999999999987
Q ss_pred Ccc
Q 004987 367 PRD 369 (720)
Q Consensus 367 ~~~ 369 (720)
...
T Consensus 327 ~~~ 329 (390)
T 2zmd_A 327 QTH 329 (390)
T ss_dssp CC-
T ss_pred cCc
Confidence 643
No 77
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=8.9e-34 Score=320.72 Aligned_cols=207 Identities=18% Similarity=0.212 Sum_probs=163.6
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004987 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~gI 142 (720)
..+|..+|.+++|||||++++ ++.+.. .+|+|||| .|++|.+++.... .+++.+++.++.||+.||.|||++||
T Consensus 68 ~~~E~~~l~~l~hpniv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~al~~lH~~~i 142 (486)
T 3mwu_A 68 ILREVELLKKLDHPNIMKLFE-ILEDSS---SFYIVGELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMHKHNI 142 (486)
T ss_dssp HHHHHHHHHHCCCTTBCCEEE-EEECSS---EEEEEECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhCCCCCcCeEEE-EEEcCC---EEEEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 347888999999999999999 665543 67999999 8999999985443 49999999999999999999999999
Q ss_pred eeccCCCCcEEEc---cCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004987 143 VVHNVRPSCFVMS---SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 143 vHrDLKP~NILl~---~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||||||+|||++ .++.+||+|||++.......
T Consensus 143 vH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-------------------------------------------- 178 (486)
T 3mwu_A 143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT-------------------------------------------- 178 (486)
T ss_dssp CCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC---------------------------------------------
T ss_pred EeccCchHHEEEecCCCCCCEEEEECCcCeECCCCC--------------------------------------------
Confidence 9999999999995 45679998888774321110
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhh
Q 004987 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
.....+||+.|+|||++.+. |+.++|||||||
T Consensus 179 -----------------------------------------------~~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~ 210 (486)
T 3mwu_A 179 -----------------------------------------------KMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGV 210 (486)
T ss_dssp --------------------------------------------------CCTTGGGGCCGGGGGSC-CCHHHHHHHHHH
T ss_pred -----------------------------------------------ccCCCcCCCCCCCHHHhCCC-CCchhhHHHHHH
Confidence 00114689999999999875 899999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcCCCC---ccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004987 300 LLFELFC---PFSTGEEKTRTMSSLRHRVLP---PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 300 lL~eLlt---pf~~~~~~~~~~~~i~~~~~p---~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
++|+|++ ||...... .....+..+..+ +.+....+...+||.+||++||.+|||+.|+|+||||+...
T Consensus 211 il~~ll~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~hp~~~~~~ 284 (486)
T 3mwu_A 211 ILYILLSGTPPFYGKNEY-DILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYS 284 (486)
T ss_dssp HHHHHHHSSCSSCCSSHH-HHHHHHHHTCCCSCSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHCHHHHHTC
T ss_pred HHHHHHhCCCCCCCCCHH-HHHHHHHhCCCCCCCcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCHhhccCc
Confidence 9999999 66655443 344444444332 22333445556999999999999999999999999998653
No 78
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=4.2e-34 Score=311.07 Aligned_cols=207 Identities=15% Similarity=0.171 Sum_probs=154.0
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004987 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~gIv 143 (720)
.+|..++..++|||||++++ ++.... .+|+|||| .|++|.+++...+ .+++.+++.++.||+.||.|||++||+
T Consensus 64 ~~E~~~l~~l~hpniv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~ql~~~L~~LH~~~iv 138 (361)
T 3uc3_A 64 QREIINHRSLRHPNIVRFKE-VILTPT---HLAIIMEYASGGELYERICNAG-RFSEDEARFFFQQLLSGVSYCHSMQIC 138 (361)
T ss_dssp HHHHHHHHHCCCTTBCCEEE-EEECSS---EEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHhCCCCCCCcEEE-EEeeCC---EEEEEEEeCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 37778899999999999999 555443 57999999 7999999995443 499999999999999999999999999
Q ss_pred eccCCCCcEEEccCCc--eEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004987 144 VHNVRPSCFVMSSFNH--VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 144 HrDLKP~NILl~~~~~--vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
||||||+|||++.++. +||+|||++.......
T Consensus 139 H~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~---------------------------------------------- 172 (361)
T 3uc3_A 139 HRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS---------------------------------------------- 172 (361)
T ss_dssp SCCCCGGGEEECSSSSCCEEECCCCCC-----------------------------------------------------
T ss_pred cCCCCHHHEEEcCCCCceEEEeecCccccccccC----------------------------------------------
Confidence 9999999999987665 9998888763210000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCcc-ccchhhhhh
Q 004987 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCA-SDIYRLGVL 300 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~-sDIwSLGvl 300 (720)
.....+||++|+|||++.+..++.+ +|||||||+
T Consensus 173 ---------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~i 207 (361)
T 3uc3_A 173 ---------------------------------------------QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVT 207 (361)
T ss_dssp -----------------------------------------------------CTTSCHHHHHCSSCCHHHHHHHHHHHH
T ss_pred ---------------------------------------------CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHH
Confidence 0011468999999999988887554 999999999
Q ss_pred hhhccc---cCCCCch---HHHHHHHhhcCCC-CccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004987 301 LFELFC---PFSTGEE---KTRTMSSLRHRVL-PPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 301 L~eLlt---pf~~~~~---~~~~~~~i~~~~~-p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
+|+|++ ||..... ....+..+..... .+......+...+||.+||++||.+|||+.|+|+||||...
T Consensus 208 l~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~ 281 (361)
T 3uc3_A 208 LYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPECCHLISRIFVADPATRISIPEIKTHSWFLKN 281 (361)
T ss_dssp HHHHHHSSCSCC----CCCHHHHHHHHHTTCCCCCTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTSHHHHTT
T ss_pred HHHHHhCCCCCCCCccHHHHHHHHHHHhcCCCCCCCcCCCCHHHHHHHHHHccCChhHCcCHHHHHhCcchhcC
Confidence 999999 6654322 2223333332222 22222334556699999999999999999999999999765
No 79
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=3.7e-34 Score=319.05 Aligned_cols=241 Identities=15% Similarity=0.194 Sum_probs=162.9
Q ss_pred eeeehhhhcccCCCCCceecccceeecC--CCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004987 63 RKHSDGVELTHGDHLRNQGGLSGVCENE--AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~--~~~~~~~lV~E~~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~ 140 (720)
+..+|..+|.+++|||||++++ ++... .....+|+||||.+++|.+++... ..+++..++.++.||+.||.|||++
T Consensus 71 ~~~~E~~~l~~l~h~nIv~l~~-~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~-~~l~~~~~~~i~~qil~aL~~LH~~ 148 (432)
T 3n9x_A 71 RILREITILNRLKSDYIIRLYD-LIIPDDLLKFDELYIVLEIADSDLKKLFKTP-IFLTEEHIKTILYNLLLGENFIHES 148 (432)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-ECCCSCTTTCCCEEEEEECCSEEHHHHHHSS-CCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCCCcceEEE-EEecCCCCcCCeEEEEEecCCcCHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 4558888999999999999999 44333 222468999999778999999654 4499999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004987 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+|||++.++.+||+|||+++........... .++.-....
T Consensus 149 givHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~---------------------------~~~~~~~~~---- 197 (432)
T 3n9x_A 149 GIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIV---------------------------NDLEENEEP---- 197 (432)
T ss_dssp TEECCCCCGGGEEECTTCCEEECCCTTCEEC-------------------------------------------------
T ss_pred CCCCCCCCHHHeEECCCCCEEEccCCCccccccccccccc---------------------------ccccccccc----
Confidence 9999999999999999999999999998654322110000 000000000
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccc-cCCCCCccccchhhhh
Q 004987 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEEL-AGAPVSCASDIYRLGV 299 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l-~~~~~s~~sDIwSLGv 299 (720)
..............+||++|+|||++ .+..++.++|||||||
T Consensus 198 -------------------------------------~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~ 240 (432)
T 3n9x_A 198 -------------------------------------GPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGC 240 (432)
T ss_dssp --------------------------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHH
T ss_pred -------------------------------------cccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHH
Confidence 00000000011236899999999986 4555999999999999
Q ss_pred hhhhccc-------------c-CCCCch----------------HHHHHH------------------------Hhhc--
Q 004987 300 LLFELFC-------------P-FSTGEE----------------KTRTMS------------------------SLRH-- 323 (720)
Q Consensus 300 lL~eLlt-------------p-f~~~~~----------------~~~~~~------------------------~i~~-- 323 (720)
++|||++ | |.+... ....+. .+..
T Consensus 241 il~ell~g~~p~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~ 320 (432)
T 3n9x_A 241 IFAELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFP 320 (432)
T ss_dssp HHHHHHTTCTTTCSSGGGCCCSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSC
T ss_pred HHHHHHhcccccccccccccccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCC
Confidence 9999995 2 111110 000000 0000
Q ss_pred CCCCc----cccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCccchHH
Q 004987 324 RVLPP----QLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEE 373 (720)
Q Consensus 324 ~~~p~----~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~l~e 373 (720)
...+. .+....+...+||.+||+.||.+|||++|+|+||||+.......+
T Consensus 321 ~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~~~~~e 374 (432)
T 3n9x_A 321 HRKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKDVRKKKLE 374 (432)
T ss_dssp CCCCCCHHHHSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTCGGGTTTCCTTTC
T ss_pred CCCCCCHHHHCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcChhhhhccCcccC
Confidence 00000 012234455699999999999999999999999999998654433
No 80
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=2.4e-34 Score=312.26 Aligned_cols=219 Identities=15% Similarity=0.192 Sum_probs=163.5
Q ss_pred eeehhhhcccCCCCCceecccceeecC-CCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004987 64 KHSDGVELTHGDHLRNQGGLSGVCENE-AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~-~~~~~~~lV~E~~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~gI 142 (720)
..+|..+|.+++||||+++++.+.... .....+|+||||.+++|.+++......+++..++.++.||+.||.|||++||
T Consensus 76 ~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i 155 (362)
T 3pg1_A 76 VLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGV 155 (362)
T ss_dssp HHHHHHHHHHCCCTTBCCCSEEEEECCTTTCCEEEEEEECCSEEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhCCCcCccceeeeEEeccCCCcceEEEEEccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCcC
Confidence 347888999999999999999444332 3344689999997789999997666679999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004987 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.++|+|||.+.......
T Consensus 156 vH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~----------------------------------------------- 188 (362)
T 3pg1_A 156 VHRDLHPGNILLADNNDITICDFNLAREDTADA----------------------------------------------- 188 (362)
T ss_dssp CCCCCCGGGEEECTTCCEEECCTTC-------------------------------------------------------
T ss_pred EecCCChHHEEEcCCCCEEEEecCccccccccc-----------------------------------------------
Confidence 999999999999999999999888873211100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-CCCCccccchhhhhhh
Q 004987 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLL 301 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~~sDIwSLGvlL 301 (720)
......||++|+|||++.+ ..++.++|||||||++
T Consensus 189 --------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il 224 (362)
T 3pg1_A 189 --------------------------------------------NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVM 224 (362)
T ss_dssp ---------------------------------------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHH
T ss_pred --------------------------------------------ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHH
Confidence 0011468999999999987 5589999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhc-C------------------------CCCc----c-ccccCchHHHHHHHcCCCC
Q 004987 302 FELFC---PFSTGEEKTRTMSSLRH-R------------------------VLPP----Q-LLLKFPKEASFCLWLLHPE 348 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~i~~-~------------------------~~p~----~-~~~~~p~~~~Li~~~L~~d 348 (720)
|+|++ ||............+.. + ..+. . .....+...+||.+||++|
T Consensus 225 ~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d 304 (362)
T 3pg1_A 225 AEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFN 304 (362)
T ss_dssp HHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSS
T ss_pred HHHHhCCCCCCCCCHHHHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCC
Confidence 99999 66655433222211110 0 0000 0 1112344569999999999
Q ss_pred CCCCCChHHHHcCcccCCCccchHH
Q 004987 349 PSGRPKMGELLQSEFLNEPRDSMEE 373 (720)
Q Consensus 349 P~~Rpta~eiL~hp~~~~~~~~l~e 373 (720)
|.+|||+.|+|+||||+....+...
T Consensus 305 P~~Rpt~~ell~hp~f~~~~~~~~~ 329 (362)
T 3pg1_A 305 PQRRISTEQALRHPYFESLFDPLDL 329 (362)
T ss_dssp GGGSCCHHHHHTSGGGTTTCCGGGG
T ss_pred hhhCCCHHHHHcCchhhhccCcccc
Confidence 9999999999999999988665443
No 81
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=2.6e-34 Score=319.07 Aligned_cols=208 Identities=21% Similarity=0.237 Sum_probs=157.0
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004987 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~g 141 (720)
+..+|..+|.+++|||||++++ ++..+ .+|+|||| .+++|.+++... ..+++.+++.++.||+.||.|||++|
T Consensus 186 ~~~~E~~~l~~l~hpniv~l~~-~~~~~----~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~ 259 (419)
T 3i6u_A 186 NVETEIEILKKLNHPCIIKIKN-FFDAE----DYYIVLELMEGGELFDKVVGN-KRLKEATCKLYFYQMLLAVQYLHENG 259 (419)
T ss_dssp CHHHHHHHHHHCCCTTBCCCCE-EEESS----EEEEEEECCTTCBGGGGTSSS-CCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCEeeEEE-EEecC----ceEEEEEcCCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3447888999999999999999 55443 36899999 899999998544 45999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCC---ceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCC
Q 004987 142 IVVHNVRPSCFVMSSFN---HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~---~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~ 218 (720)
|+||||||+|||++..+ .+||+|||++...+...
T Consensus 260 ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~~~~~~~------------------------------------------- 296 (419)
T 3i6u_A 260 IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS------------------------------------------- 296 (419)
T ss_dssp CCCSCCCGGGEEESSSSSSCCEEECCSSTTTSCC----------------------------------------------
T ss_pred ccccCCChHhEEEecCCCcceEEEeecccceecCCCc-------------------------------------------
Confidence 99999999999997544 49998888774332110
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC---CCCCccccch
Q 004987 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG---APVSCASDIY 295 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~---~~~s~~sDIw 295 (720)
.....+||+.|+|||++.+ ..++.++|||
T Consensus 297 ------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Diw 328 (419)
T 3i6u_A 297 ------------------------------------------------LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCW 328 (419)
T ss_dssp --------------------------------------------------------CTTCCTTTTC----CTTHHHHHHH
T ss_pred ------------------------------------------------cccccCCCCCccCceeeecCCCCCCCchhhhH
Confidence 0011478999999999864 4588999999
Q ss_pred hhhhhhhhccc---cCCCCchHHHHHHHhhcCC--CCccccc-cCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004987 296 RLGVLLFELFC---PFSTGEEKTRTMSSLRHRV--LPPQLLL-KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 296 SLGvlL~eLlt---pf~~~~~~~~~~~~i~~~~--~p~~~~~-~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
||||++|+|++ ||............+..+. +++.... ..+...+||.+||++||.+|||+.|+|+||||+..
T Consensus 329 slG~il~~lltg~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~~ 406 (419)
T 3i6u_A 329 SLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDE 406 (419)
T ss_dssp HHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCCH
T ss_pred hHHHHHHHHHHCCCCCCCCcchHHHHHHHhcCCCCCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhCCcccCCh
Confidence 99999999999 6654433222333333332 2233333 34455599999999999999999999999999874
No 82
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=7.3e-34 Score=313.78 Aligned_cols=216 Identities=16% Similarity=0.152 Sum_probs=154.0
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhC--------CCCCCCHHHHHHHHHHHHHHHH
Q 004987 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK--------PKRSVDVYECLHIFRQIVEIVY 135 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~~g~sL~~~L~~--------~~~~l~~~~~~~i~~QIl~aL~ 135 (720)
..+|..+|.+++|||||++++ ++.... ...+|+||||.+++|.+++.. ....+++..++.|+.||+.||.
T Consensus 65 ~~~E~~~l~~l~hpniv~~~~-~~~~~~-~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~ 142 (405)
T 3rgf_A 65 ACREIALLRELKHPNVISLQK-VFLSHA-DRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIH 142 (405)
T ss_dssp HHHHHHHHHHCCCTTBCCCCE-EEEETT-TTEEEEEEECCSEEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCeeeEee-EEecCC-CCeEEEEEeCCCCCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHH
Confidence 346888999999999999999 443322 236899999977899998831 1224899999999999999999
Q ss_pred HHHHcCceeccCCCCcEEE----ccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccc
Q 004987 136 AAHSQGIVVHNVRPSCFVM----SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQ 211 (720)
Q Consensus 136 ~LHs~gIvHrDLKP~NILl----~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfg 211 (720)
|||++||+||||||+|||+ +..+.+||+|||++...+..... .
T Consensus 143 ~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~~--------------------------------~- 189 (405)
T 3rgf_A 143 YLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKP--------------------------------L- 189 (405)
T ss_dssp HHHHTTCCCCCCCGGGEEECCSSTTTTCEEECCTTCCC------------------------------------------
T ss_pred HHHhCCEeCCCcCHHHeEEecCCCCCCcEEEEECCCceecCCCCcc--------------------------------c-
Confidence 9999999999999999999 67789999988887443211000 0
Q ss_pred cccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC-CCc
Q 004987 212 LVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSC 290 (720)
Q Consensus 212 la~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~-~s~ 290 (720)
......+||++|+|||++.+.. ++.
T Consensus 190 ------------------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~ 215 (405)
T 3rgf_A 190 ------------------------------------------------------ADLDPVVVTFWYRAPELLLGARHYTK 215 (405)
T ss_dssp -------------------------------------------------------------CCCTTCCHHHHTTCCSCCH
T ss_pred ------------------------------------------------------ccCCCceecCcccCchhhcCCCcccc
Confidence 0001247899999999998854 899
Q ss_pred cccchhhhhhhhhccc---cCCCCchH--------HHHHHHhhc--CCCCcccc--------------------------
Q 004987 291 ASDIYRLGVLLFELFC---PFSTGEEK--------TRTMSSLRH--RVLPPQLL-------------------------- 331 (720)
Q Consensus 291 ~sDIwSLGvlL~eLlt---pf~~~~~~--------~~~~~~i~~--~~~p~~~~-------------------------- 331 (720)
++|||||||++|||++ ||...... ...+..+.. +..+...+
T Consensus 216 ~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (405)
T 3rgf_A 216 AIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSL 295 (405)
T ss_dssp HHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCH
T ss_pred hhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchh
Confidence 9999999999999999 56433221 011111110 11110000
Q ss_pred ---------ccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004987 332 ---------LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 332 ---------~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
...+...+||.+||++||.+|||+.|+|+||||....
T Consensus 296 ~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~hp~f~~~~ 341 (405)
T 3rgf_A 296 IKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLEDP 341 (405)
T ss_dssp HHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTSSS
T ss_pred hhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhccCC
Confidence 0134456999999999999999999999999998763
No 83
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=2.8e-34 Score=323.30 Aligned_cols=207 Identities=17% Similarity=0.265 Sum_probs=165.7
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004987 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~g 141 (720)
+..+|..+|..++||||+++++ ++.... .+|+|||| .|++|.+++... ..+++.+++.++.||+.||.|||++|
T Consensus 62 ~~~~Ei~~l~~l~HpnIv~l~~-~~~~~~---~~~lv~E~~~gg~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~g 136 (476)
T 2y94_A 62 KIRREIQNLKLFRHPHIIKLYQ-VISTPS---DIFMVMEYVSGGELFDYICKN-GRLDEKESRRLFQQILSGVDYCHRHM 136 (476)
T ss_dssp HHHHHHHHHTTCCCTTBCCEEE-EEECSS---EEEEEEECCSSEEHHHHTTSS-SSCCHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHhCCCCCCCcEEE-EEEECC---EEEEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3447888999999999999999 555543 57999999 799999999554 45999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004987 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||++...... .+
T Consensus 137 ivHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~----------------------------------~~----------- 171 (476)
T 2y94_A 137 VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG----------------------------------EF----------- 171 (476)
T ss_dssp EECSCCSGGGEEECTTCCEEECCCSSCEECCTT----------------------------------CC-----------
T ss_pred CCcccccHHHEEEecCCCeEEEeccchhhcccc----------------------------------cc-----------
Confidence 999999999999999999999988887332110 00
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCC-Cccccchhhhhh
Q 004987 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYRLGVL 300 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~-s~~sDIwSLGvl 300 (720)
....+||+.|+|||++.+..+ +.++|||||||+
T Consensus 172 ----------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvi 205 (476)
T 2y94_A 172 ----------------------------------------------LRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVI 205 (476)
T ss_dssp ----------------------------------------------BCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHH
T ss_pred ----------------------------------------------ccccCCCcCeEChhhccCCCCCCCcceehhhHHH
Confidence 011468999999999998875 789999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004987 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 301 L~eLlt---pf~~~~~~~~~~~~i~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
+|+|++ ||...... .....+..+.+... ....+...+||.+||+.||.+|||+.|+++||||+..
T Consensus 206 l~elltG~~Pf~~~~~~-~~~~~i~~~~~~~p-~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~hp~~~~~ 273 (476)
T 2y94_A 206 LYALLCGTLPFDDDHVP-TLFKKICDGIFYTP-QYLNPSVISLLKHMLQVDPMKRATIKDIREHEWFKQD 273 (476)
T ss_dssp HHHHHHSSCSSCCSSSH-HHHHHHHTTCCCCC-TTCCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHTT
T ss_pred HHHHhhCCCCCCCCCHH-HHHHHHhcCCcCCC-ccCCHHHHHHHHHHcCCCchhCcCHHHHHhCHHhhhc
Confidence 999999 66654433 34444444433211 1233455699999999999999999999999999864
No 84
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=1.6e-34 Score=314.43 Aligned_cols=220 Identities=15% Similarity=0.155 Sum_probs=164.5
Q ss_pred eeeehhhhcccCCCCCceecccceeecC--CCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004987 63 RKHSDGVELTHGDHLRNQGGLSGVCENE--AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~--~~~~~~~lV~E~~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~ 140 (720)
+..+|..+|.+++||||+++++ ++... .....+|+||||.+++|.+++... .+++.+++.++.||+.||.|||++
T Consensus 71 ~~~~E~~~l~~l~h~niv~~~~-~~~~~~~~~~~~~~iv~e~~~~~L~~~l~~~--~~~~~~~~~i~~qi~~aL~~LH~~ 147 (364)
T 3qyz_A 71 RTLREIKILLRFRHENIIGIND-IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ--HLSNDHICYFLYQILRGLKYIHSA 147 (364)
T ss_dssp HHHHHHHHHHHCCCTTBCCCCE-EECCSSTTTCCCEEEEEECCSEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcCCCCCcccee-EEecCCccccceEEEEEcccCcCHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHC
Confidence 3447888999999999999999 44333 233468999999778999999653 399999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004987 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+|||++.++.+||+|||.+....... +.
T Consensus 148 ~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~---------------------------------~~---------- 184 (364)
T 3qyz_A 148 NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH---------------------------------DH---------- 184 (364)
T ss_dssp TEECCCCCGGGEEECTTCCEEECCCTTCEECCGGG---------------------------------CB----------
T ss_pred CeecCCCChHhEEECCCCCEEEEeCcceEecCCCC---------------------------------Cc----------
Confidence 99999999999999999999999998874321110 00
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC-CCccccchhhhh
Q 004987 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGV 299 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~-~s~~sDIwSLGv 299 (720)
.......+||++|+|||++.+.. ++.++|||||||
T Consensus 185 --------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~ 220 (364)
T 3qyz_A 185 --------------------------------------------TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGC 220 (364)
T ss_dssp --------------------------------------------CCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHH
T ss_pred --------------------------------------------cccccccccccCCCCCHHhcCCCCCCcchhHHHHHH
Confidence 00001147899999999876544 899999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhc-CCCC---------------------------cc-ccccCchHHHHHHHcCCC
Q 004987 300 LLFELFC---PFSTGEEKTRTMSSLRH-RVLP---------------------------PQ-LLLKFPKEASFCLWLLHP 347 (720)
Q Consensus 300 lL~eLlt---pf~~~~~~~~~~~~i~~-~~~p---------------------------~~-~~~~~p~~~~Li~~~L~~ 347 (720)
++|+|++ ||............+.. +..+ .. +....+...+||.+||.+
T Consensus 221 il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~ 300 (364)
T 3qyz_A 221 ILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTF 300 (364)
T ss_dssp HHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCS
T ss_pred HHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCC
Confidence 9999999 66654332221111110 0000 00 112234556999999999
Q ss_pred CCCCCCChHHHHcCcccCCCccchH
Q 004987 348 EPSGRPKMGELLQSEFLNEPRDSME 372 (720)
Q Consensus 348 dP~~Rpta~eiL~hp~~~~~~~~l~ 372 (720)
||.+|||+.|+|+||||+....+..
T Consensus 301 dP~~R~t~~e~l~hp~~~~~~~~~~ 325 (364)
T 3qyz_A 301 NPHKRIEVEQALAHPYLEQYYDPSD 325 (364)
T ss_dssp STTTSCCHHHHHTSGGGTTTCCGGG
T ss_pred ChhhCCCHHHHhcCcchhhccCccc
Confidence 9999999999999999998755443
No 85
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=3.5e-34 Score=307.25 Aligned_cols=207 Identities=18% Similarity=0.239 Sum_probs=160.9
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004987 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~g 141 (720)
+..+|..+|.+++||||+++++ ++.... .+|+|||| .|++|.+++...+ .+++..++.++.||+.||.|||++|
T Consensus 67 ~~~~E~~~l~~l~hp~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~lH~~~ 141 (327)
T 3a62_A 67 HTKAERNILEEVKHPFIVDLIY-AFQTGG---KLYLILEYLSGGELFMQLEREG-IFMEDTACFYLAEISMALGHLHQKG 141 (327)
T ss_dssp ----HHHHHHHCCCTTBCCEEE-EEECSS---CEEEEEECCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCccceeE-EEEcCC---EEEEEEeCCCCCcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3447888999999999999999 555543 67999999 8999999995443 4899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004987 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||++....... .
T Consensus 142 ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---------------------------------~------------ 176 (327)
T 3a62_A 142 IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDG---------------------------------T------------ 176 (327)
T ss_dssp CCCCCCCTTTEEECTTSCEEECCCSCC-----------------------------------------------------
T ss_pred EEcccCCHHHeEECCCCcEEEEeCCcccccccCC---------------------------------c------------
Confidence 9999999999999999999999888873211100 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004987 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGvlL 301 (720)
.....+||+.|+|||++.+..++.++|||||||++
T Consensus 177 ---------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il 211 (327)
T 3a62_A 177 ---------------------------------------------VTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALM 211 (327)
T ss_dssp -----------------------------------------------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHH
T ss_pred ---------------------------------------------cccccCCCcCccCHhhCcCCCCCCcccchhHHHHH
Confidence 00114689999999999998899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCcccccc-CchHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC
Q 004987 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLK-FPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~i~~~~~p~~~~~~-~p~~~~Li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~ 367 (720)
|||++ ||...... ..+..+....++ ++.. .+...+||.+||..||.+|| ++.|+++||||+..
T Consensus 212 ~el~~g~~pf~~~~~~-~~~~~i~~~~~~--~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp~f~~~ 283 (327)
T 3a62_A 212 YDMLTGAPPFTGENRK-KTIDKILKCKLN--LPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHI 283 (327)
T ss_dssp HHHHHSSCSCCCSSHH-HHHHHHHHTCCC--CCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHSGGGSSC
T ss_pred HHHHHCCCCCCCCCHH-HHHHHHHhCCCC--CCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcCCcccCC
Confidence 99999 67655443 333333332211 1122 34455999999999999999 88999999999875
No 86
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=1.1e-33 Score=320.69 Aligned_cols=207 Identities=15% Similarity=0.202 Sum_probs=162.3
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004987 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~g 141 (720)
+..+|..+|..++|||||++++ ++.+.. .+|+|||| .|++|.+++... ..+++..++.++.||+.||.|||++|
T Consensus 82 ~~~~E~~~l~~l~hpniv~~~~-~~~~~~---~~~lv~e~~~~g~L~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ 156 (494)
T 3lij_A 82 KLLEEVAVLKLLDHPNIMKLYD-FFEDKR---NYYLVMECYKGGELFDEIIHR-MKFNEVDAAVIIKQVLSGVTYLHKHN 156 (494)
T ss_dssp HHHHHHHHHTTCCCTTBCCEEE-EEECSS---EEEEEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCCCeEEE-EEEeCC---EEEEEEecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3347888999999999999999 665543 57999999 899999998544 34999999999999999999999999
Q ss_pred ceeccCCCCcEEEccC---CceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCC
Q 004987 142 IVVHNVRPSCFVMSSF---NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 142 IvHrDLKP~NILl~~~---~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~ 218 (720)
|+||||||+|||++.. +.+||+|||++.......
T Consensus 157 ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~------------------------------------------- 193 (494)
T 3lij_A 157 IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQK------------------------------------------- 193 (494)
T ss_dssp EECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTB-------------------------------------------
T ss_pred ceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCc-------------------------------------------
Confidence 9999999999999764 459998888763321100
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhh
Q 004987 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
.....+||++|+|||++.+ .|+.++||||||
T Consensus 194 ------------------------------------------------~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG 224 (494)
T 3lij_A 194 ------------------------------------------------KMKERLGTAYYIAPEVLRK-KYDEKCDVWSIG 224 (494)
T ss_dssp ------------------------------------------------CBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHH
T ss_pred ------------------------------------------------cccccCCCcCeeCHHHHcc-cCCCchhHHHHH
Confidence 0011478999999999875 599999999999
Q ss_pred hhhhhccc---cCCCCchHHHHHHHhhcCCC--Cc-cccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004987 299 VLLFELFC---PFSTGEEKTRTMSSLRHRVL--PP-QLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 299 vlL~eLlt---pf~~~~~~~~~~~~i~~~~~--p~-~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|++|+|++ ||...... .....+..+.. +. .+....+...+||.+||++||.+|||+.|+|+||||+..
T Consensus 225 ~il~~ll~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~hp~~~~~ 298 (494)
T 3lij_A 225 VILFILLAGYPPFGGQTDQ-EILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEM 298 (494)
T ss_dssp HHHHHHHHSSCSSCCSSHH-HHHHHHHHTCCCCCSGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHHH
T ss_pred HHHHHHHhCCCCCCCCCHH-HHHHHHHhCCCCCCchhcccCCHHHHHHHHHHCCCChhhCccHHHHhcCcccccC
Confidence 99999999 66655443 34444444332 22 223334455699999999999999999999999999764
No 87
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=1.8e-34 Score=301.41 Aligned_cols=204 Identities=17% Similarity=0.229 Sum_probs=161.5
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004987 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~gIv 143 (720)
.+|..++.+++||||+++++ ++.+.. .+++|||| .+++|.+++.... .+++..++.++.||+.||.|||++||+
T Consensus 57 ~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~qi~~~l~~LH~~~i~ 131 (279)
T 3fdn_A 57 RREVEIQSHLRHPNILRLYG-YFHDAT---RVYLILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYCHSKRVI 131 (279)
T ss_dssp HHHHHHHTTCCCTTBCCEEE-EEECSS---EEEEEECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHTTTCE
T ss_pred HHHHHHHHcCCCCCCcchhh-eEecCC---EEEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCEe
Confidence 36778999999999999999 555543 57999999 8899999995443 499999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004987 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.++|+|||.+......
T Consensus 132 H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~------------------------------------------------- 162 (279)
T 3fdn_A 132 HRDIKPENLLLGSAGELKIADFGWSVHAPSS------------------------------------------------- 162 (279)
T ss_dssp ECCCCGGGEEECTTSCEEECSCCEESCC----------------------------------------------------
T ss_pred cccCChHhEEEcCCCCEEEEeccccccCCcc-------------------------------------------------
Confidence 9999999999999999999988876321110
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004987 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGvlL~e 303 (720)
......||+.|+|||++.+..++.++|||||||++|+
T Consensus 163 -------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ 199 (279)
T 3fdn_A 163 -------------------------------------------RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 199 (279)
T ss_dssp ------------------------------------------------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHH
T ss_pred -------------------------------------------cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHH
Confidence 0011368999999999999889999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004987 304 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~i~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
|++ ||...... .....+.....+ ++... +...+||.+||++||.+|||+.|+|+||||+...
T Consensus 200 l~~g~~p~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h~~~~~~~ 265 (279)
T 3fdn_A 200 FLVGKPPFEANTYQ-ETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANS 265 (279)
T ss_dssp HHHSSCTTCCSSHH-HHHHHHHHTCCC--CCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHCHHHHHHC
T ss_pred HHHCCCCCCCCcHH-HHHHHHHhCCCC--CCCcCCHHHHHHHHHHhccChhhCCCHHHHhhCccccCCc
Confidence 999 66654433 333333322211 12223 3455999999999999999999999999998653
No 88
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=9.7e-35 Score=308.91 Aligned_cols=216 Identities=18% Similarity=0.289 Sum_probs=166.1
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004987 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~g 141 (720)
+..+|..++.+++||||+++++.+.........+|+|||| .|++|.+++...+ .+++.+++.++.||+.||.|||++|
T Consensus 58 ~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~ 136 (311)
T 3ork_A 58 RFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG-PMTPKRAIEVIADACQALNFSHQNG 136 (311)
T ss_dssp HHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEEEEEEECCCEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCCCCcceEEEeeeccCCCCcccEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 4457888999999999999999444444433456999999 7999999995443 4999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004987 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||++.........
T Consensus 137 ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~-------------------------------------------- 172 (311)
T 3ork_A 137 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNS-------------------------------------------- 172 (311)
T ss_dssp CCCCCCCGGGEEEETTSCEEECCCSCC-----------------------------------------------------
T ss_pred CCcCCCCHHHEEEcCCCCEEEeeccCcccccccccc--------------------------------------------
Confidence 999999999999999999999999887433211000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004987 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGvlL 301 (720)
........||+.|+|||++.+..++.++|||||||++
T Consensus 173 -------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l 209 (311)
T 3ork_A 173 -------------------------------------------VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVL 209 (311)
T ss_dssp ----------------------------------------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHH
T ss_pred -------------------------------------------cccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHH
Confidence 0000114689999999999999999999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccc-cccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCC
Q 004987 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQL-LLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNE 366 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~i~~~~~p~~~-~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~ 366 (720)
|||++ ||............+.....++.. ....+ ...+||.+||+.||.+||++.++|.|+|+..
T Consensus 210 ~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 279 (311)
T 3ork_A 210 YEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRV 279 (311)
T ss_dssp HHHHHSSCSCCCSSHHHHHHHHHHCCCCCHHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred HHHHhCCCCCCCCChHHHHHHHhcCCCCCcccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHH
Confidence 99999 777666655555555554444432 22333 4559999999999999999999999999764
No 89
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=1.8e-33 Score=305.14 Aligned_cols=205 Identities=16% Similarity=0.222 Sum_probs=163.0
Q ss_pred eehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004987 65 HSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~gI 142 (720)
..|..+|..+ +||||+++++ ++++.. .+|+|||| .|++|.+++.+.+ .+++..++.++.||+.||.|||++||
T Consensus 68 ~~E~~~l~~~~~hp~iv~l~~-~~~~~~---~~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~gi 142 (353)
T 2i0e_A 68 MVEKRVLALPGKPPFLTQLHS-CFQTMD---RLYFVMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFLQSKGI 142 (353)
T ss_dssp HHHHHHHTCTTCCTTBCCEEE-EEECSS---EEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhcCCCCEEeeEEE-EEEcCC---EEEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence 3566678776 8999999999 565543 67999999 8999999995543 49999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004987 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.+|++||+|||++.......
T Consensus 143 vHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~----------------------------------------------- 175 (353)
T 2i0e_A 143 IYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG----------------------------------------------- 175 (353)
T ss_dssp BCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT-----------------------------------------------
T ss_pred EeccCCHHHEEEcCCCcEEEEeCCcccccccCC-----------------------------------------------
Confidence 999999999999999999999888874321100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004987 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGvlL~ 302 (720)
......+||+.|+|||++.+..++.++|||||||++|
T Consensus 176 -------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ 212 (353)
T 2i0e_A 176 -------------------------------------------VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLY 212 (353)
T ss_dssp -------------------------------------------CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHH
T ss_pred -------------------------------------------cccccccCCccccChhhhcCCCcCCcccccchHHHHH
Confidence 0001147899999999999999999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCCCccccc-cCchHHHHHHHcCCCCCCCCCC-----hHHHHcCcccCCC
Q 004987 303 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEP 367 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~i~~~~~p~~~~~-~~p~~~~Li~~~L~~dP~~Rpt-----a~eiL~hp~~~~~ 367 (720)
||++ ||...... .....+....+. ++. ..+...+||.+||+.||.+||+ +++|++||||+..
T Consensus 213 ell~G~~Pf~~~~~~-~~~~~i~~~~~~--~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h~~f~~~ 283 (353)
T 2i0e_A 213 EMLAGQAPFEGEDED-ELFQSIMEHNVA--YPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYI 283 (353)
T ss_dssp HHHHSSCSSCCSSHH-HHHHHHHHCCCC--CCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTSGGGTTC
T ss_pred HHHcCCCCCCCCCHH-HHHHHHHhCCCC--CCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCccccCC
Confidence 9999 67655443 344444433221 122 2345559999999999999994 6999999999875
No 90
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8.3e-34 Score=306.58 Aligned_cols=210 Identities=13% Similarity=0.155 Sum_probs=161.9
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004987 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~gIvH 144 (720)
.+|..++.+++||||+++++ ++.... .+++||||.+++|.+++......+++.+++.++.||+.||.|||++||+|
T Consensus 60 ~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH 135 (346)
T 1ua2_A 60 LREIKLLQELSHPNIIGLLD-AFGHKS---NISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILH 135 (346)
T ss_dssp HHHHHHHHHCCCTTBCCEEE-EECCTT---CCEEEEECCSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHhhCCCCCCCeEEE-EEeeCC---ceEEEEEcCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCEEC
Confidence 37888999999999999999 555443 56999999667999999766667999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004987 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+|||++.++.+||+|||++...+....
T Consensus 136 ~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~------------------------------------------------ 167 (346)
T 1ua2_A 136 RDLKPNNLLLDENGVLKLADFGLAKSFGSPNR------------------------------------------------ 167 (346)
T ss_dssp CCCCGGGEEECTTCCEEECCCGGGSTTTSCCC------------------------------------------------
T ss_pred CCCCHHHEEEcCCCCEEEEecccceeccCCcc------------------------------------------------
Confidence 99999999999999999998888744321100
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC-CCccccchhhhhhhhh
Q 004987 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFE 303 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~-~s~~sDIwSLGvlL~e 303 (720)
......||++|+|||++.+.. ++.++|||||||++||
T Consensus 168 ------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~e 205 (346)
T 1ua2_A 168 ------------------------------------------AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAE 205 (346)
T ss_dssp ------------------------------------------CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHH
T ss_pred ------------------------------------------cCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHH
Confidence 001146899999999997654 8999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhc-CCCCcc------------------------c-cccCchHHHHHHHcCCCCCCCCCC
Q 004987 304 LFC---PFSTGEEKTRTMSSLRH-RVLPPQ------------------------L-LLKFPKEASFCLWLLHPEPSGRPK 354 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~i~~-~~~p~~------------------------~-~~~~p~~~~Li~~~L~~dP~~Rpt 354 (720)
|++ ||............+.. +..++. . ....+...+||.+||+.||.+|||
T Consensus 206 ll~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt 285 (346)
T 1ua2_A 206 LLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARIT 285 (346)
T ss_dssp HHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCC
T ss_pred HHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCC
Confidence 999 45444433222222211 111000 0 111234559999999999999999
Q ss_pred hHHHHcCcccCCCc
Q 004987 355 MGELLQSEFLNEPR 368 (720)
Q Consensus 355 a~eiL~hp~~~~~~ 368 (720)
+.|+|+||||....
T Consensus 286 ~~ell~h~~f~~~~ 299 (346)
T 1ua2_A 286 ATQALKMKYFSNRP 299 (346)
T ss_dssp HHHHHTSGGGTSSS
T ss_pred HHHHhcChhhhcCC
Confidence 99999999998753
No 91
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=9.1e-34 Score=307.42 Aligned_cols=202 Identities=17% Similarity=0.230 Sum_probs=151.5
Q ss_pred ehhhhcccCC-----CCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004987 66 SDGVELTHGD-----HLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 66 ~e~~~L~~l~-----HpnIV~l~~~~~~~~~~~~~~~lV~E~~g~sL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~~LHs 139 (720)
+|..++..+. |||||++++ ++.... .+|+||||.|++|.+++.. ....+++.+++.++.||+.||.|||+
T Consensus 80 ~e~~~l~~l~~~~~~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~ 155 (360)
T 3llt_A 80 IEADILKKIQNDDINNNNIVKYHG-KFMYYD---HMCLIFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRK 155 (360)
T ss_dssp HHHHHHHHTCCCSTTGGGBCCEEE-EEEETT---EEEEEECCCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcccCCCCCCeecccc-eeeECC---eeEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 5666777665 999999999 554443 6799999999999999944 33459999999999999999999999
Q ss_pred cCceeccCCCCcEEEcc-------------------------CCceEEeccCcccCCCCCCcccccccccccccCCCCCC
Q 004987 140 QGIVVHNVRPSCFVMSS-------------------------FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPL 194 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~-------------------------~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~ 194 (720)
+||+||||||+|||++. ++.+||+|||++
T Consensus 156 ~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a-------------------------- 209 (360)
T 3llt_A 156 MSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCA-------------------------- 209 (360)
T ss_dssp TTEECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTC--------------------------
T ss_pred CCeeeCCCCcccEEEccccccccccchhcccccccccccccCCCCEEEEeccCc--------------------------
Confidence 99999999999999975 455555555544
Q ss_pred chhhHhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccC
Q 004987 195 PLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMET 274 (720)
Q Consensus 195 ~~d~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt 274 (720)
...... .....||
T Consensus 210 -------------------~~~~~~------------------------------------------------~~~~~gt 222 (360)
T 3llt_A 210 -------------------TFKSDY------------------------------------------------HGSIINT 222 (360)
T ss_dssp -------------------EETTSC------------------------------------------------CCSCCSC
T ss_pred -------------------eecCCC------------------------------------------------CcCccCc
Confidence 211100 0114689
Q ss_pred CcccCCccccCCCCCccccchhhhhhhhhccc---cCCCCchHHHHHHHhhc--CCCCcccc------------------
Q 004987 275 NWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRH--RVLPPQLL------------------ 331 (720)
Q Consensus 275 ~~Y~APE~l~~~~~s~~sDIwSLGvlL~eLlt---pf~~~~~~~~~~~~i~~--~~~p~~~~------------------ 331 (720)
+.|+|||++.+..++.++|||||||++|+|++ ||........ ...+.. ..+|+...
T Consensus 223 ~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 301 (360)
T 3llt_A 223 RQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEH-LAMMESIIQPIPKNMLYEATKTNGSKYVNKDELK 301 (360)
T ss_dssp GGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTE
T ss_pred ccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCCcHHHH-HHHHHHhcCCCCHHHHhhhhhccCccccCcccce
Confidence 99999999999999999999999999999999 6765543322 111111 11111100
Q ss_pred -------------------------ccCchHHHHHHHcCCCCCCCCCChHHHHcCcccC
Q 004987 332 -------------------------LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLN 365 (720)
Q Consensus 332 -------------------------~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~ 365 (720)
...+...+||.+||++||.+|||+.|+|+||||+
T Consensus 302 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpta~elL~hp~f~ 360 (360)
T 3llt_A 302 LAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLKHKFLE 360 (360)
T ss_dssp ECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGC
T ss_pred ecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhcCChhhCCCHHHHhcCcccC
Confidence 0113344999999999999999999999999995
No 92
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=3.9e-34 Score=312.30 Aligned_cols=213 Identities=20% Similarity=0.241 Sum_probs=158.0
Q ss_pred eeeehhhhcccCCCCCceecccceeecCC---CCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004987 63 RKHSDGVELTHGDHLRNQGGLSGVCENEA---AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~---~~~~~~lV~E~~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs 139 (720)
+..+|..++..++||||+++++ ++.... ....+|+||||.+++|.+++.. .+++..+..++.||+.||.|||+
T Consensus 70 ~~~~E~~~l~~l~hpniv~~~~-~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~---~~~~~~~~~i~~qi~~al~~lH~ 145 (371)
T 2xrw_A 70 RAYRELVLMKCVNHKNIIGLLN-VFTPQKSLEEFQDVYIVMELMDANLCQVIQM---ELDHERMSYLLYQMLCGIKHLHS 145 (371)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EECSCCSTTTCCEEEEEEECCSEEHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCccceEE-eeccccccccccceEEEEEcCCCCHHHHHhh---ccCHHHHHHHHHHHHHHHHHHHH
Confidence 3447888999999999999999 554332 2336899999977799999853 38999999999999999999999
Q ss_pred cCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004987 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||+||||||+|||++.++.+||+|||++...+...
T Consensus 146 ~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~-------------------------------------------- 181 (371)
T 2xrw_A 146 AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-------------------------------------------- 181 (371)
T ss_dssp TTCCCSCCCGGGEEECTTSCEEECCCCC----------------------------------------------------
T ss_pred CCeecccCCHHHEEEcCCCCEEEEEeeccccccccc--------------------------------------------
Confidence 999999999999999999999999888874321100
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhh
Q 004987 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
.....+||+.|+|||++.+..++.++|||||||
T Consensus 182 -----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~ 214 (371)
T 2xrw_A 182 -----------------------------------------------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 214 (371)
T ss_dssp -------------------------------------------------------CTTCCHHHHTTCCCCTTHHHHHHHH
T ss_pred -----------------------------------------------ccCCceecCCccCHHHhcCCCCCchHhHHHHHH
Confidence 001146899999999999988999999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcCCCC-cccc-------------------------------c--------cCch
Q 004987 300 LLFELFC---PFSTGEEKTRTMSSLRHRVLP-PQLL-------------------------------L--------KFPK 336 (720)
Q Consensus 300 lL~eLlt---pf~~~~~~~~~~~~i~~~~~p-~~~~-------------------------------~--------~~p~ 336 (720)
++|||++ ||............+.....| +.+. + ..+.
T Consensus 215 il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (371)
T 2xrw_A 215 IMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQ 294 (371)
T ss_dssp HHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHH
T ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHH
Confidence 9999999 676655443322222211110 0000 0 0123
Q ss_pred HHHHHHHcCCCCCCCCCChHHHHcCcccCCCccc
Q 004987 337 EASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 337 ~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
..+||.+||.+||.+|||++|+|+||||+....+
T Consensus 295 ~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~~~~ 328 (371)
T 2xrw_A 295 ARDLLSKMLVIDASKRISVDEALQHPYINVWYDP 328 (371)
T ss_dssp HHHHHHHHSCSSGGGSCCHHHHHHSHHHHTTCCH
T ss_pred HHHHHHHHCcCChhhCCCHHHHhCCcchhhhcCc
Confidence 4599999999999999999999999999876554
No 93
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=3.3e-34 Score=312.87 Aligned_cols=214 Identities=17% Similarity=0.247 Sum_probs=162.9
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCC---CCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004987 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAA---IDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~---~~~~~lV~E~~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs 139 (720)
+..+|..++..++||||+++++ ++..... ...+|+||||.+++|.+++.. .+++..++.++.||+.||.|||+
T Consensus 87 ~~~~E~~~l~~l~h~niv~~~~-~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~---~~~~~~~~~i~~qi~~aL~~LH~ 162 (371)
T 4exu_A 87 RAYRELLLLKHMQHENVIGLLD-VFTPASSLRNFYDFYLVMPFMQTDLQKIMGM---EFSEEKIQYLVYQMLKGLKYIHS 162 (371)
T ss_dssp HHHHHHHHHHHCCCTTBCCCSE-EECSCSSSTTCCCCEEEEECCCEEHHHHTTS---CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCchhhhh-heeccCCcccceeEEEEEccccccHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHH
Confidence 4447888999999999999999 5544332 223599999977899998832 39999999999999999999999
Q ss_pred cCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004987 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||+||||||+|||++.++.+||+|||.+...+..
T Consensus 163 ~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~--------------------------------------------- 197 (371)
T 4exu_A 163 AGVVHRDLKPGNLAVNEDCELKILDFGLARHADAE--------------------------------------------- 197 (371)
T ss_dssp TTCCCSCCCGGGEEECTTCCEEECSTTCC---------------------------------------------------
T ss_pred CCCcCCCcCHHHeEECCCCCEEEEecCcccccccC---------------------------------------------
Confidence 99999999999999999999999988877322110
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-CCCCccccchhhh
Q 004987 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLG 298 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~~sDIwSLG 298 (720)
.....||++|+|||++.+ ..++.++||||||
T Consensus 198 ------------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG 229 (371)
T 4exu_A 198 ------------------------------------------------MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVG 229 (371)
T ss_dssp --------------------------------------------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHH
T ss_pred ------------------------------------------------cCCcccCccccCHHHhcCCCCCCcHHhHHHHH
Confidence 011467999999999987 5689999999999
Q ss_pred hhhhhccc---cCCCCchHHHHHHHhhc-CCCCcc----------------------------ccccCchHHHHHHHcCC
Q 004987 299 VLLFELFC---PFSTGEEKTRTMSSLRH-RVLPPQ----------------------------LLLKFPKEASFCLWLLH 346 (720)
Q Consensus 299 vlL~eLlt---pf~~~~~~~~~~~~i~~-~~~p~~----------------------------~~~~~p~~~~Li~~~L~ 346 (720)
|++|+|++ ||............+.. +..+.. +....+...+||.+||+
T Consensus 230 ~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~ 309 (371)
T 4exu_A 230 CIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLE 309 (371)
T ss_dssp HHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSC
T ss_pred HHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCC
Confidence 99999999 67655443322222211 111100 11223455699999999
Q ss_pred CCCCCCCChHHHHcCcccCCCccchHH
Q 004987 347 PEPSGRPKMGELLQSEFLNEPRDSMEE 373 (720)
Q Consensus 347 ~dP~~Rpta~eiL~hp~~~~~~~~l~e 373 (720)
+||.+|||+.|+|+||||+....+..+
T Consensus 310 ~dP~~Rpt~~ell~hp~f~~~~~~~~~ 336 (371)
T 4exu_A 310 LDVDKRLTAAQALTHPFFEPFRDPEEE 336 (371)
T ss_dssp SCTTTSCCHHHHHTSGGGTTTCCGGGC
T ss_pred CChhhcCCHHHHhcCcccccCCCcccc
Confidence 999999999999999999987554433
No 94
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=1.9e-33 Score=293.14 Aligned_cols=206 Identities=18% Similarity=0.269 Sum_probs=162.8
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004987 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~gI 142 (720)
..+|..++.+++||||+++++ ++.... .+|+|||| .|++|.+++... ..+++.+++.++.||+.||.|||++||
T Consensus 53 ~~~E~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i 127 (277)
T 3f3z_A 53 FKQEIEIMKSLDHPNIIRLYE-TFEDNT---DIYLVMELCTGGELFERVVHK-RVFRESDAARIMKDVLSAVAYCHKLNV 127 (277)
T ss_dssp HHHHHHHHHTCCCTTBCCEEE-EEECSS---EEEEEEECCCSCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHhCCCCCEeeEEE-EEecCC---eEEEEEeccCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 346788999999999999999 555443 57999999 899999999543 349999999999999999999999999
Q ss_pred eeccCCCCcEEE---ccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004987 143 VVHNVRPSCFVM---SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 143 vHrDLKP~NILl---~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||||||+|||+ +.++.++|+|||.+.......
T Consensus 128 ~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~-------------------------------------------- 163 (277)
T 3f3z_A 128 AHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK-------------------------------------------- 163 (277)
T ss_dssp ECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTS--------------------------------------------
T ss_pred cCCCCCHHHEEEecCCCCCcEEEEecccceeccCcc--------------------------------------------
Confidence 999999999999 778899998888774321110
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhh
Q 004987 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
......||+.|+|||++.+. ++.++|||||||
T Consensus 164 -----------------------------------------------~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~ 195 (277)
T 3f3z_A 164 -----------------------------------------------MMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGV 195 (277)
T ss_dssp -----------------------------------------------CBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHH
T ss_pred -----------------------------------------------chhccCCCCCccChHHhccc-CCchhhehhHHH
Confidence 00113689999999999766 899999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcCCC--Ccccc-ccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004987 300 LLFELFC---PFSTGEEKTRTMSSLRHRVL--PPQLL-LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 300 lL~eLlt---pf~~~~~~~~~~~~i~~~~~--p~~~~-~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
++|+|++ ||...... .....+..+.. +.... ...+...+|+.+||++||.+|||+.++|+||||+..
T Consensus 196 ~l~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~ 268 (277)
T 3f3z_A 196 MMYVLLCGYPPFSAPTDS-EVMLKIREGTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEHEWFEKQ 268 (277)
T ss_dssp HHHHHHHSSCSSCCSSHH-HHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHHH
T ss_pred HHHHHHHCCCCCCCCCHH-HHHHHHHhCCCCCCchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhcc
Confidence 9999999 66665444 33333443322 22222 334455699999999999999999999999999764
No 95
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=3.1e-34 Score=300.79 Aligned_cols=207 Identities=19% Similarity=0.216 Sum_probs=153.9
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHHHc-C
Q 004987 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHSQ-G 141 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~~g~sL~~~L~~---~~~~l~~~~~~~i~~QIl~aL~~LHs~-g 141 (720)
.+...+..++||||+++++ ++..+. .+|+||||.+++|.+++.. ....+++..++.++.||+.||.|||++ |
T Consensus 55 ~~~~~~~~~~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~ 130 (290)
T 3fme_A 55 DLDISMRTVDCPFTVTFYG-ALFREG---DVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS 130 (290)
T ss_dssp HHHHHHTTCCCTTBCCEEE-EEECSS---SEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHhCCCCeEEEEee-eeeccC---CEEEEEehhccchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCC
Confidence 3344578899999999999 555443 5799999966799888732 455699999999999999999999998 9
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004987 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||.+.......
T Consensus 131 i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~---------------------------------------------- 164 (290)
T 3fme_A 131 VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDV---------------------------------------------- 164 (290)
T ss_dssp CCCCCCSGGGCEECTTCCEEBCCC--------------------------------------------------------
T ss_pred eecCCCCHHHEEECCCCCEEEeecCCcccccccc----------------------------------------------
Confidence 9999999999999999999998888773321110
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccc----cCCCCCccccchhh
Q 004987 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEEL----AGAPVSCASDIYRL 297 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l----~~~~~s~~sDIwSL 297 (720)
......||+.|+|||++ .+..++.++|||||
T Consensus 165 ---------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~sl 199 (290)
T 3fme_A 165 ---------------------------------------------AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSL 199 (290)
T ss_dssp --------------------------------------------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHH
T ss_pred ---------------------------------------------cccccCCCccccChhhcChhhcCcCCCcHHHHHHH
Confidence 00013689999999996 45568999999999
Q ss_pred hhhhhhccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004987 298 GVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 298 GvlL~eLlt---pf~~~~~~~~~~~~i~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
||++|+|++ ||..................+......+ +...+|+.+||++||.+|||+.|+++||||+..
T Consensus 200 G~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~hp~f~~~ 273 (290)
T 3fme_A 200 GITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLH 273 (290)
T ss_dssp HHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred HHHHHHHHHCCCCccccCchHHHHHHHhccCCCCcccccCCHHHHHHHHHHhhcChhhCcCHHHHHhCcccccC
Confidence 999999999 6765433333333333333333333333 445699999999999999999999999999864
No 96
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=8.6e-34 Score=299.38 Aligned_cols=212 Identities=17% Similarity=0.231 Sum_probs=162.7
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004987 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~gI 142 (720)
..+|..++..++||||+++++ ++.... .+++|||| .+++|.+++......+++..++.++.||+.||.|||++||
T Consensus 63 ~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i 138 (302)
T 2j7t_A 63 YIVEIEILATCDHPYIVKLLG-AYYHDG---KLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRI 138 (302)
T ss_dssp HHHHHHHHHHCCCTTBCCEEE-EEECC----CEEEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhcCCCCCEeeeee-eeeeCC---eEEEEEEeCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcCCc
Confidence 346777899999999999999 554443 57999999 8999999986545569999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004987 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.++|+|||.+..... ..
T Consensus 139 ~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~-----------------------------------~~------------ 171 (302)
T 2j7t_A 139 IHRDLKAGNVLMTLEGDIRLADFGVSAKNLK-----------------------------------TL------------ 171 (302)
T ss_dssp CCCCCSGGGEEECTTSCEEECCCHHHHHHHH-----------------------------------HH------------
T ss_pred ccCCCCHHHEEECCCCCEEEEECCCCccccc-----------------------------------cc------------
Confidence 9999999999999999999988887521000 00
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCcccc-----CCCCCccccchhh
Q 004987 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-----GAPVSCASDIYRL 297 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~-----~~~~s~~sDIwSL 297 (720)
. ......||+.|+|||++. +..++.++|||||
T Consensus 172 ------------------------------------~-------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~sl 208 (302)
T 2j7t_A 172 ------------------------------------Q-------KRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSL 208 (302)
T ss_dssp ------------------------------------H-------C-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHH
T ss_pred ------------------------------------c-------ccccccCChhhcCCeeeccccCCCCCCchhhhHHHH
Confidence 0 001146899999999983 5668999999999
Q ss_pred hhhhhhccc---cCCCCchHHHHHHHhhcCCCCc-cccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCCccc
Q 004987 298 GVLLFELFC---PFSTGEEKTRTMSSLRHRVLPP-QLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 298 GvlL~eLlt---pf~~~~~~~~~~~~i~~~~~p~-~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
||++|+|++ ||.......... .+.....+. .....++ ...+|+.+||+.||.+|||+.++++||||......
T Consensus 209 G~il~~l~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~~~ 285 (302)
T 2j7t_A 209 GITLIEMAQIEPPHHELNPMRVLL-KIAKSDPPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVSSITSN 285 (302)
T ss_dssp HHHHHHHHHSSCTTTTSCHHHHHH-HHHHSCCCCCSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTSTTTTTCCCC
T ss_pred HHHHHHHhcCCCCCccCCHHHHHH-HHhccCCcccCCccccCHHHHHHHHHHcccChhhCCCHHHHhcChHHhhhccc
Confidence 999999999 666554443332 333222222 2223344 44599999999999999999999999999987654
No 97
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=9e-34 Score=312.81 Aligned_cols=210 Identities=18% Similarity=0.235 Sum_probs=154.4
Q ss_pred ehhhhc-ccCCCCCceecccceeec-CCCCCcEEEEEec-CCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004987 66 SDGVEL-THGDHLRNQGGLSGVCEN-EAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 66 ~e~~~L-~~l~HpnIV~l~~~~~~~-~~~~~~~~lV~E~-~g~sL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~~LHs~g 141 (720)
+|..++ ...+||||+++++ +++. ......+|+|||| .|++|.++|... ...+++.+++.|+.||+.||.|||++|
T Consensus 103 ~E~~~~~~~~~hp~iv~l~~-~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ 181 (400)
T 1nxk_A 103 REVELHWRASQCPHIVRIVD-VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN 181 (400)
T ss_dssp HHHHHHHHHTTSTTBCCEEE-EEEEEETTEEEEEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhcCCCCcceEeE-EEeecccCCcEEEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 444454 3468999999999 4433 2223368999999 889999999654 345999999999999999999999999
Q ss_pred ceeccCCCCcEEEcc---CCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCC
Q 004987 142 IVVHNVRPSCFVMSS---FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 142 IvHrDLKP~NILl~~---~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~ 218 (720)
|+||||||+|||++. ++.+||+|||++.......
T Consensus 182 ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~------------------------------------------- 218 (400)
T 1nxk_A 182 IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN------------------------------------------- 218 (400)
T ss_dssp EECCCCCGGGEEESSSSTTCCEEECCCTTCEECC----------------------------------------------
T ss_pred ccccCcCcceEEEecCCCCccEEEEecccccccCCCC-------------------------------------------
Confidence 999999999999997 7889998888774221100
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhh
Q 004987 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
.....+||+.|+|||++.+..|+.++||||||
T Consensus 219 ------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG 250 (400)
T 1nxk_A 219 ------------------------------------------------SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLG 250 (400)
T ss_dssp --------------------------------------------------------CTTCCGGGSCCCCSSSHHHHHHHH
T ss_pred ------------------------------------------------ccccCCCCCCccCHhhcCCCCCCCcccHHHHH
Confidence 00114789999999999988899999999999
Q ss_pred hhhhhccc---cCCCCchHH---HHHHHhhcC--CCCccc-cccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004987 299 VLLFELFC---PFSTGEEKT---RTMSSLRHR--VLPPQL-LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 299 vlL~eLlt---pf~~~~~~~---~~~~~i~~~--~~p~~~-~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|++|||++ ||....... .....+..+ .++... ....+...+||.+||+.||.+|||+.|+|+||||...
T Consensus 251 ~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~~ 328 (400)
T 1nxk_A 251 VIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 328 (400)
T ss_dssp HHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHTT
T ss_pred HHHHHHHhCCCCCCCCccccccHHHHHHHHcCcccCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCccccCC
Confidence 99999999 565432110 112222222 222222 2233445699999999999999999999999999865
No 98
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=5.8e-34 Score=297.23 Aligned_cols=208 Identities=17% Similarity=0.230 Sum_probs=142.5
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004987 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~gI 142 (720)
..+|..++.+++||||+++++ ++.+.. .+|+|||| .+++|.+++......+++.+++.++.||+.||.|||++||
T Consensus 58 ~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i 133 (278)
T 3cok_A 58 VQNEVKIHCQLKHPSILELYN-YFEDSN---YVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGI 133 (278)
T ss_dssp HHHHHHHHTTBCCTTBCCEEE-EEECSS---EEEEEEECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHhCCCCCeEeEEE-EEccCC---eEEEEEecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 346778899999999999999 555543 67999999 7899999997766679999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004987 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.++|+|||.+........
T Consensus 134 ~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~---------------------------------------------- 167 (278)
T 3cok_A 134 LHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHE---------------------------------------------- 167 (278)
T ss_dssp ECSSCCGGGEEECTTCCEEECCCTTCEECC--------------------------------------------------
T ss_pred ecCCCCHHHEEEcCCCCEEEEeecceeeccCCCC----------------------------------------------
Confidence 9999999999999999999998888743211100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004987 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGvlL~ 302 (720)
......||+.|+|||++.+..++.++|||||||++|
T Consensus 168 --------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ 203 (278)
T 3cok_A 168 --------------------------------------------KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFY 203 (278)
T ss_dssp --------------------------------------------------------------------CTHHHHHHHHHH
T ss_pred --------------------------------------------cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHH
Confidence 000136799999999999888999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCCCcccccc-CchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004987 303 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLK-FPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~i~~~~~p~~~~~~-~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
+|++ ||....... ....+..... ..+.. .+...+||.+||+.||.+|||+.++|+||||....
T Consensus 204 ~l~~g~~p~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~ 270 (278)
T 3cok_A 204 TLLIGRPPFDTDTVKN-TLNKVVLADY--EMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLDHPFMSRNS 270 (278)
T ss_dssp HHHHSSCSSCCCSCC------CCSSCC--CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSTTTC---
T ss_pred HHHhCCCCCCChhHHH-HHHHHhhccc--CCccccCHHHHHHHHHHcccCHhhCCCHHHHhcCccccCCC
Confidence 9999 665443221 1111111111 11222 23455999999999999999999999999998753
No 99
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=3.6e-34 Score=327.55 Aligned_cols=206 Identities=15% Similarity=0.223 Sum_probs=164.2
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004987 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~-~~l~~~~~~~i~~QIl~aL~~LHs~gI 142 (720)
.+|..+|.+++|||||++++ ++++.. .+|+|||| .|++|.+++...+ ..+++..++.|+.||+.||.|||++||
T Consensus 232 ~~E~~iL~~l~hp~Iv~l~~-~~~~~~---~l~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gI 307 (576)
T 2acx_A 232 LNEKQILEKVNSRFVVSLAY-AYETKD---ALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERI 307 (576)
T ss_dssp HHHHHHHHHCCCTTBCCEEE-EEECSS---EEEEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHcCCCCEeeEEE-EEeeCC---EEEEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence 36778999999999999999 565543 67999999 8999999995533 349999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004987 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
|||||||+|||++.+|++||+|||++.......
T Consensus 308 vHrDLKPeNILld~~g~vKL~DFGla~~~~~~~----------------------------------------------- 340 (576)
T 2acx_A 308 VYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ----------------------------------------------- 340 (576)
T ss_dssp ECCCCCGGGEEECTTSCEEECCCTTCEECCTTC-----------------------------------------------
T ss_pred eccCCchheEEEeCCCCeEEEecccceecccCc-----------------------------------------------
Confidence 999999999999999999999888874321100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004987 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGvlL~ 302 (720)
.....+||+.|+|||++.+..++.++|||||||++|
T Consensus 341 --------------------------------------------~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvily 376 (576)
T 2acx_A 341 --------------------------------------------TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLY 376 (576)
T ss_dssp --------------------------------------------CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHH
T ss_pred --------------------------------------------cccccCCCccccCHHHHcCCCCCccchHHHHHHHHH
Confidence 001147899999999999988999999999999999
Q ss_pred hccc---cCCCCc---hHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC
Q 004987 303 ELFC---PFSTGE---EKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 367 (720)
Q Consensus 303 eLlt---pf~~~~---~~~~~~~~i~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~ 367 (720)
||++ ||.... ........+... +..+...+ +...+||.+||++||.+|| ++.||++||||+..
T Consensus 377 eLltG~~PF~~~~~~~~~~~i~~~i~~~--~~~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~HpfF~~i 451 (576)
T 2acx_A 377 EMIAGQSPFQQRKKKIKREEVERLVKEV--PEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKL 451 (576)
T ss_dssp HHHHSSCSSSCSSSCCCHHHHHHHHHHC--CCCCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTSGGGTTC
T ss_pred HHHhCCCCCcccccchhHHHHHHHhhcc--cccCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhChhhccC
Confidence 9999 665532 122333333322 22222333 4455999999999999999 78999999999985
No 100
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=4.9e-33 Score=316.07 Aligned_cols=207 Identities=18% Similarity=0.233 Sum_probs=164.4
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004987 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~gIv 143 (720)
.+|..+|.+++|||||++++ ++++.. .+|+|||| .|++|.+++.... .+++.+++.++.||+.||.|||++||+
T Consensus 94 ~~E~~~l~~l~hpniv~~~~-~~~~~~---~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~iv 168 (504)
T 3q5i_A 94 YNEISLLKSLDHPNIIKLFD-VFEDKK---YFYLVTEFYEGGELFEQIINRH-KFDECDAANIMKQILSGICYLHKHNIV 168 (504)
T ss_dssp HHHHHHHHTCCCTTBCCEEE-EEECSS---EEEEEEECCTTCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHhCCCCCCCeEEE-EEEcCC---EEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeE
Confidence 37888999999999999999 665543 67999999 8999999995443 499999999999999999999999999
Q ss_pred eccCCCCcEEEccCC---ceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004987 144 VHNVRPSCFVMSSFN---HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 144 HrDLKP~NILl~~~~---~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||||||+|||++.++ .+||+|||++.......
T Consensus 169 H~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~--------------------------------------------- 203 (504)
T 3q5i_A 169 HRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDY--------------------------------------------- 203 (504)
T ss_dssp CSCCSGGGEEESSTTCCSSEEECCCTTCEECCTTS---------------------------------------------
T ss_pred eCCCcHHHEEEecCCCCccEEEEECCCCEEcCCCC---------------------------------------------
Confidence 999999999998766 68998888774321110
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhh
Q 004987 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
.....+||+.|+|||++.+ .++.++|||||||+
T Consensus 204 ----------------------------------------------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~i 236 (504)
T 3q5i_A 204 ----------------------------------------------KLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVI 236 (504)
T ss_dssp ----------------------------------------------CBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHH
T ss_pred ----------------------------------------------ccccccCCcCCCCHHHhcc-CCCchHHHHHHHHH
Confidence 0011468999999999875 48999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCc--cc-cccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004987 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPP--QL-LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 301 L~eLlt---pf~~~~~~~~~~~~i~~~~~p~--~~-~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
+|+|++ ||...... .....+..+.+.. .. ....+...+||.+||++||.+|||+.|+|+||||+....
T Consensus 237 l~~ll~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~~ 310 (504)
T 3q5i_A 237 MYILLCGYPPFGGQNDQ-DIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYAN 310 (504)
T ss_dssp HHHHHHSSCSSCCSSHH-HHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHTCC
T ss_pred HHHHHhCCCCCCCCCHH-HHHHHHHcCCCCCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcCHhhhhchh
Confidence 999999 66655443 4444454443322 22 233445569999999999999999999999999987644
No 101
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=8.1e-34 Score=304.25 Aligned_cols=208 Identities=19% Similarity=0.288 Sum_probs=161.1
Q ss_pred eeehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004987 64 KHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 64 ~~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~~LHs~ 140 (720)
..+|..++..+ .||||+++++ ++.... .+|+|||| .|++|.+++.. ....+++.+++.++.||+.||.|||++
T Consensus 75 ~~~e~~~l~~l~~~~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~ 150 (327)
T 3lm5_A 75 ILHEIAVLELAKSCPRVINLHE-VYENTS---EIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQN 150 (327)
T ss_dssp HHHHHHHHHHTTTCTTBCCEEE-EEECSS---EEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhccCCCCEEEEEE-EEEeCC---eEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 33677778777 5699999999 555443 57999999 89999999843 345699999999999999999999999
Q ss_pred CceeccCCCCcEEEcc---CCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCC
Q 004987 141 GIVVHNVRPSCFVMSS---FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 141 gIvHrDLKP~NILl~~---~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~ 217 (720)
||+||||||+|||++. .+.+||+|||.+...+...
T Consensus 151 givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~------------------------------------------ 188 (327)
T 3lm5_A 151 NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHAC------------------------------------------ 188 (327)
T ss_dssp TEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC----------------------------------------------
T ss_pred CeecCcCChHHEEEecCCCCCcEEEeeCccccccCCcc------------------------------------------
Confidence 9999999999999987 7899998888774321110
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhh
Q 004987 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRL 297 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSL 297 (720)
......||+.|+|||++.+..++.++|||||
T Consensus 189 -------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Diwsl 219 (327)
T 3lm5_A 189 -------------------------------------------------ELREIMGTPEYLAPEILNYDPITTATDMWNI 219 (327)
T ss_dssp ------------------------------------------------------CCCGGGCCHHHHTTCCCCTHHHHHHH
T ss_pred -------------------------------------------------ccccccCCcCccCCeeecCCCCCchhhHHHH
Confidence 0011468999999999999999999999999
Q ss_pred hhhhhhccc---cCCCCchHHHHHHHhhc--CCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004987 298 GVLLFELFC---PFSTGEEKTRTMSSLRH--RVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 298 GvlL~eLlt---pf~~~~~~~~~~~~i~~--~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
||++|+|++ ||........ ...+.. ...++...... +...+||.+||++||.+|||++++|+||||+..
T Consensus 220 G~il~~ll~g~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h~~~~~~ 294 (327)
T 3lm5_A 220 GIIAYMLLTHTSPFVGEDNQET-YLNISQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQW 294 (327)
T ss_dssp HHHHHHHHHSSCSSCCSSHHHH-HHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTCGGGCCC
T ss_pred HHHHHHHHhCCCCCCCCCchHH-HHHHHhcccccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCCHhhccc
Confidence 999999999 6766544432 222222 22233333333 445599999999999999999999999999876
No 102
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=7.4e-34 Score=301.39 Aligned_cols=210 Identities=17% Similarity=0.198 Sum_probs=157.0
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004987 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~gIv 143 (720)
.+|..++.+++||||+++++ ++.... .+++|||| .+++|.+++... ..+++..++.++.||+.||.|||++||+
T Consensus 50 ~~E~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~i~~~l~~~l~~lH~~~iv 124 (311)
T 4agu_A 50 LREIRMLKQLKHPNLVNLLE-VFRRKR---RLHLVFEYCDHTVLHELDRYQ-RGVPEHLVKSITWQTLQAVNFCHKHNCI 124 (311)
T ss_dssp HHHHHHHHHCCCTTBCCEEE-EEEETT---EEEEEEECCSEEHHHHHHHTS-SCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHhCCCCCccchhh-eeecCC---eEEEEEEeCCCchHHHHHhhh-cCCCHHHHHHHHHHHHHHHHHHHHCCCc
Confidence 37888999999999999999 555443 57999999 788888877544 4599999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004987 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+||+++.++.++|+|||.+....... +
T Consensus 125 H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~---------------------------------~-------------- 157 (311)
T 4agu_A 125 HRDVKPENILITKHSVIKLCDFGFARLLTGPS---------------------------------D-------------- 157 (311)
T ss_dssp CCCCSGGGEEECTTSCEEECCCTTCEECC---------------------------------------------------
T ss_pred CCCCChhhEEEcCCCCEEEeeCCCchhccCcc---------------------------------c--------------
Confidence 99999999999999999999888874321110 0
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-CCCCccccchhhhhhhh
Q 004987 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLF 302 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~~sDIwSLGvlL~ 302 (720)
......||++|+|||++.+ ..++.++|||||||++|
T Consensus 158 -------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~ 194 (311)
T 4agu_A 158 -------------------------------------------YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFA 194 (311)
T ss_dssp ---------------------------------------------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHH
T ss_pred -------------------------------------------ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHH
Confidence 0011368999999999987 45899999999999999
Q ss_pred hccc---cCCCCchHHHHHHH--hhcCC------------------CCc---------cccccCchHHHHHHHcCCCCCC
Q 004987 303 ELFC---PFSTGEEKTRTMSS--LRHRV------------------LPP---------QLLLKFPKEASFCLWLLHPEPS 350 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~--i~~~~------------------~p~---------~~~~~~p~~~~Li~~~L~~dP~ 350 (720)
+|++ ||............ ..... .+. .+....+...+|+.+||++||.
T Consensus 195 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~ 274 (311)
T 4agu_A 195 ELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPT 274 (311)
T ss_dssp HHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTT
T ss_pred HHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChh
Confidence 9999 66655433222111 10010 000 0112233455999999999999
Q ss_pred CCCChHHHHcCcccCCCcc
Q 004987 351 GRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 351 ~Rpta~eiL~hp~~~~~~~ 369 (720)
+|||++|+|+||||+....
T Consensus 275 ~Rpt~~ell~hp~f~~~~~ 293 (311)
T 4agu_A 275 ERLTCEQLLHHPYFENIRE 293 (311)
T ss_dssp TSCCHHHHHTSGGGTTCC-
T ss_pred hcCCHHHHhcChHHHhccC
Confidence 9999999999999998754
No 103
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=8.8e-34 Score=301.52 Aligned_cols=217 Identities=17% Similarity=0.192 Sum_probs=157.3
Q ss_pred eeeehhhhccc-CCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004987 63 RKHSDGVELTH-GDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~L~~-l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~ 140 (720)
+..+|..+|.+ ++||||+++++ ++.... .+|+|||| .|++|.+++... ..+++.+++.++.||+.||.|||++
T Consensus 56 ~~~~E~~~l~~~~~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~ 130 (316)
T 2ac3_A 56 RVFREVEMLYQCQGHRNVLELIE-FFEEED---RFYLVFEKMRGGSILSHIHKR-RHFNELEASVVVQDVASALDFLHNK 130 (316)
T ss_dssp HHHHHHHHHHHTCCCTTBCCEEE-EEEETT---EEEEEEECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhcCCCCeeeEEE-EEeeCC---EEEEEEEcCCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 34467777877 57999999999 555443 68999999 889999999554 3499999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCc---eEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCC
Q 004987 141 GIVVHNVRPSCFVMSSFNH---VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~---vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~ 217 (720)
||+||||||+|||++.++. +||+|||++.......... ..
T Consensus 131 ~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~------------------------------~~------- 173 (316)
T 2ac3_A 131 GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCS------------------------------PI------- 173 (316)
T ss_dssp TCCCCCCCGGGEEESCSSSSCSEEECCTTCCC------------------------------------------------
T ss_pred CceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCccc------------------------------cc-------
Confidence 9999999999999997766 9998888774321110000 00
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-----CCCCccc
Q 004987 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-----APVSCAS 292 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-----~~~s~~s 292 (720)
.........||+.|+|||++.+ ..++.++
T Consensus 174 ----------------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~ 207 (316)
T 2ac3_A 174 ----------------------------------------------STPELLTPCGSAEYMAPEVVEAFSEEASIYDKRC 207 (316)
T ss_dssp ------------------------------------------------------CCSGGGCCHHHHHHTSHHHHHHTTTH
T ss_pred ----------------------------------------------cccccccccCCcCccChHHhhcccccccCCCccc
Confidence 0000011468999999999975 4489999
Q ss_pred cchhhhhhhhhccc---cCCCCch--------------HHHHHHHhhcCC--CCccccc-cCchHHHHHHHcCCCCCCCC
Q 004987 293 DIYRLGVLLFELFC---PFSTGEE--------------KTRTMSSLRHRV--LPPQLLL-KFPKEASFCLWLLHPEPSGR 352 (720)
Q Consensus 293 DIwSLGvlL~eLlt---pf~~~~~--------------~~~~~~~i~~~~--~p~~~~~-~~p~~~~Li~~~L~~dP~~R 352 (720)
|||||||++|||++ ||..... .......+.... +|..... ..+...+||.+||++||.+|
T Consensus 208 DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 287 (316)
T 2ac3_A 208 DLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQR 287 (316)
T ss_dssp HHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTS
T ss_pred ccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhC
Confidence 99999999999999 6654321 122333343332 2222222 33445699999999999999
Q ss_pred CChHHHHcCcccCCC
Q 004987 353 PKMGELLQSEFLNEP 367 (720)
Q Consensus 353 pta~eiL~hp~~~~~ 367 (720)
||+.|+|+||||+..
T Consensus 288 ps~~e~l~hp~~~~~ 302 (316)
T 2ac3_A 288 LSAAQVLQHPWVQGC 302 (316)
T ss_dssp CCHHHHHHSTTCC--
T ss_pred CCHHHHhcChhhcCC
Confidence 999999999999975
No 104
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=5.4e-34 Score=334.44 Aligned_cols=205 Identities=16% Similarity=0.218 Sum_probs=163.8
Q ss_pred ehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004987 66 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~gIv 143 (720)
.|..+|..+ +||||+.+++ ++++.. .+|+|||| .|++|.++|...+ .+++..++.|+.||+.||.|||++|||
T Consensus 390 ~E~~~l~~~~~~~~i~~l~~-~~~~~~---~~~lV~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~gIi 464 (674)
T 3pfq_A 390 VEKRVLALPGKPPFLTQLHS-CFQTMD---RLYFVMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFLQSKGII 464 (674)
T ss_dssp HHHHHHTCTTCCTTBCCEEE-ECBCSS---EEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTSEE
T ss_pred HHHHHHHhccCCCeEEEEEE-EEEeCC---EEEEEEeCcCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeE
Confidence 566677775 7999999999 555543 67999999 8999999996543 499999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004987 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+||||+.+|++||+|||+++......
T Consensus 465 HrDLKp~NILl~~~g~ikL~DFGla~~~~~~~------------------------------------------------ 496 (674)
T 3pfq_A 465 YRDLKLDNVMLDSEGHIKIADFGMCKENIWDG------------------------------------------------ 496 (674)
T ss_dssp CCCCCSTTEEECSSSCEEECCCTTCEECCCTT------------------------------------------------
T ss_pred eccCChhhEEEcCCCcEEEeecceeeccccCC------------------------------------------------
Confidence 99999999999999999999888874211100
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004987 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGvlL~e 303 (720)
......+||+.|+|||++.+..|+.++|||||||+|||
T Consensus 497 ------------------------------------------~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilye 534 (674)
T 3pfq_A 497 ------------------------------------------VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYE 534 (674)
T ss_dssp ------------------------------------------CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHH
T ss_pred ------------------------------------------cccccccCCCcccCHhhhcCCCCCccceEechHHHHHH
Confidence 00012579999999999999999999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCCh-----HHHHcCcccCCC
Q 004987 304 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM-----GELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~i~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta-----~eiL~hp~~~~~ 367 (720)
|++ ||...... ..+..+....+.. .....+...+||.+||++||.+||++ +||++||||+..
T Consensus 535 lltG~~Pf~~~~~~-~~~~~i~~~~~~~-p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h~ff~~i 604 (674)
T 3pfq_A 535 MLAGQAPFEGEDED-ELFQSIMEHNVAY-PKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYI 604 (674)
T ss_dssp HHHSSCSSCCSSHH-HHHHHHHSSCCCC-CTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSSGGGSSC
T ss_pred HHcCCCCCCCCCHH-HHHHHHHhCCCCC-CccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcCccccCC
Confidence 999 77665554 4444444432211 11233455699999999999999997 999999999986
No 105
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=2.2e-33 Score=309.10 Aligned_cols=214 Identities=17% Similarity=0.179 Sum_probs=161.0
Q ss_pred eehhhhcccCCCCCceecccceeecCC--CCCcEEEEEecCCCCHHHHHh---CCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004987 65 HSDGVELTHGDHLRNQGGLSGVCENEA--AIDPFVHAIEWGDVSLRQWLD---KPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~--~~~~~~lV~E~~g~sL~~~L~---~~~~~l~~~~~~~i~~QIl~aL~~LHs 139 (720)
.+|..+|..++|||||++++.++.... ....+++||||.+++|.+.+. .....+++..++.++.||+.||.|||+
T Consensus 80 ~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~ 159 (394)
T 4e7w_A 80 NRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHS 159 (394)
T ss_dssp CHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 368889999999999999995544332 223478999996667666552 234569999999999999999999999
Q ss_pred cCceeccCCCCcEEEc-cCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCC
Q 004987 140 QGIVVHNVRPSCFVMS-SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~-~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~ 218 (720)
+||+||||||+|||++ .++.+||+|||+++......
T Consensus 160 ~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~~------------------------------------------- 196 (394)
T 4e7w_A 160 IGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGE------------------------------------------- 196 (394)
T ss_dssp TTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTTC-------------------------------------------
T ss_pred CCccCCCCCHHHEEEcCCCCcEEEeeCCCcccccCCC-------------------------------------------
Confidence 9999999999999999 78999998888874321110
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC-CCccccchhh
Q 004987 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRL 297 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~-~s~~sDIwSL 297 (720)
......||++|+|||++.+.. ++.++|||||
T Consensus 197 ------------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSl 228 (394)
T 4e7w_A 197 ------------------------------------------------PNVSYICSRYYRAPELIFGATNYTTNIDIWST 228 (394)
T ss_dssp ------------------------------------------------CCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHH
T ss_pred ------------------------------------------------CCcccccCcCccCHHHHcCCCCCCcHHHHHHH
Confidence 001146899999999997764 8999999999
Q ss_pred hhhhhhccc---cCCCCchHHHHHHHhhc------------------CCCCc--------cccc-cCchHHHHHHHcCCC
Q 004987 298 GVLLFELFC---PFSTGEEKTRTMSSLRH------------------RVLPP--------QLLL-KFPKEASFCLWLLHP 347 (720)
Q Consensus 298 GvlL~eLlt---pf~~~~~~~~~~~~i~~------------------~~~p~--------~~~~-~~p~~~~Li~~~L~~ 347 (720)
||++|||++ ||............+.. ..+|. .+.. ..+...+||.+||++
T Consensus 229 G~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~ 308 (394)
T 4e7w_A 229 GCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEY 308 (394)
T ss_dssp HHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCS
T ss_pred HHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCC
Confidence 999999999 67665544333222221 00110 0111 223455999999999
Q ss_pred CCCCCCChHHHHcCcccCCCcc
Q 004987 348 EPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 348 dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
||.+|||+.|+|+||||+....
T Consensus 309 dP~~R~t~~e~l~hp~f~~~~~ 330 (394)
T 4e7w_A 309 TPSARLTAIEALCHPFFDELRT 330 (394)
T ss_dssp SGGGSCCHHHHHTSGGGSTTTS
T ss_pred ChhhCCCHHHHhcChhhhhhcc
Confidence 9999999999999999998644
No 106
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=1.4e-33 Score=302.43 Aligned_cols=210 Identities=20% Similarity=0.264 Sum_probs=147.9
Q ss_pred eeehhhhcccCC-CCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004987 64 KHSDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 64 ~~~e~~~L~~l~-HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~g 141 (720)
..+|..++..+. |||||++++ ++.+.. .+|+|||| .|++|.+++... ..+++.+++.++.||+.||.|||++|
T Consensus 52 ~~~e~~~l~~l~~h~niv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~ 126 (325)
T 3kn6_A 52 TQKEITALKLCEGHPNIVKLHE-VFHDQL---HTFLVMELLNGGELFERIKKK-KHFSETEASYIMRKLVSAVSHMHDVG 126 (325)
T ss_dssp HHHHHHHHHHTTTCTTBCCEEE-EEECSS---EEEEEECCCCSCBHHHHHHHC-SCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhcCCCCeeEEEE-EEEcCC---EEEEEEEccCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 336777888887 999999999 565543 57999999 889999999654 45999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCC---ceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCC
Q 004987 142 IVVHNVRPSCFVMSSFN---HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~---~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~ 218 (720)
|+||||||+|||++.++ .+||+|||++........
T Consensus 127 ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~------------------------------------------ 164 (325)
T 3kn6_A 127 VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQ------------------------------------------ 164 (325)
T ss_dssp EECCCCCGGGEEEEC----CEEEECCCTTCEECCC---------------------------------------------
T ss_pred CeecCCCHHHEEEecCCCcccEEEeccccceecCCCCC------------------------------------------
Confidence 99999999999998665 799988887732211100
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhh
Q 004987 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
......||+.|+|||++.+..++.++||||||
T Consensus 165 ------------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG 196 (325)
T 3kn6_A 165 ------------------------------------------------PLKTPCFTLHYAAPELLNQNGYDESCDLWSLG 196 (325)
T ss_dssp -------------------------------------------------------------------CCCCHHHHHHHHH
T ss_pred ------------------------------------------------cccccCCCcCccCHHHhcCCCCCCccchHHHH
Confidence 00114679999999999999999999999999
Q ss_pred hhhhhccc---cCCCCc------hHHHHHHHhhcCCCC--cccc-ccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCC
Q 004987 299 VLLFELFC---PFSTGE------EKTRTMSSLRHRVLP--PQLL-LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 366 (720)
Q Consensus 299 vlL~eLlt---pf~~~~------~~~~~~~~i~~~~~p--~~~~-~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~ 366 (720)
|++|+|++ ||.... .....+..+..+.++ .... ...+...+||.+||++||.+|||+.|+++||||+.
T Consensus 197 ~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h~w~~~ 276 (325)
T 3kn6_A 197 VILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQD 276 (325)
T ss_dssp HHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTCGGGCT
T ss_pred HHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcChhhcc
Confidence 99999999 565432 123445555544332 2222 23445569999999999999999999999999987
Q ss_pred Cc
Q 004987 367 PR 368 (720)
Q Consensus 367 ~~ 368 (720)
..
T Consensus 277 ~~ 278 (325)
T 3kn6_A 277 GS 278 (325)
T ss_dssp TC
T ss_pred Cc
Confidence 63
No 107
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=2.4e-33 Score=295.49 Aligned_cols=213 Identities=18% Similarity=0.226 Sum_probs=163.7
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004987 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~~g~sL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~~LHs~gI 142 (720)
..+|..++.+++||||+++++ ++..+. .+|+||||.+++|.+++... ...+++..++.++.||+.||.|||++||
T Consensus 49 ~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i 124 (299)
T 2r3i_A 49 AIREISLLKELNHPNIVKLLD-VIHTEN---KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 124 (299)
T ss_dssp HHHHHHHHTTCCCTTBCCEEE-EEEETT---EEEEEEECCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHcCCCCeeeEEE-EEecCC---ceEEEEEcccCCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 346888999999999999999 555443 57999999667999999443 3458999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004987 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.++|+|||.+...+....
T Consensus 125 ~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~---------------------------------------------- 158 (299)
T 2r3i_A 125 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR---------------------------------------------- 158 (299)
T ss_dssp CCCCCCGGGEEECTTSCEEECSTTHHHHHCCCSB----------------------------------------------
T ss_pred cCCCCCHHHeEEcCCCCEEECcchhhhhccCCcc----------------------------------------------
Confidence 9999999999999999999998887733211100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC-CCccccchhhhhhh
Q 004987 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLL 301 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~-~s~~sDIwSLGvlL 301 (720)
......||+.|+|||++.+.. ++.++|||||||++
T Consensus 159 --------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l 194 (299)
T 2r3i_A 159 --------------------------------------------TYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIF 194 (299)
T ss_dssp --------------------------------------------CTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHH
T ss_pred --------------------------------------------ccCcccccccccCcHHhhccccCChHHHHHHHHHHH
Confidence 001136799999999998876 79999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhc-CCCCc--------------cc------------cccCchHHHHHHHcCCCCCCC
Q 004987 302 FELFC---PFSTGEEKTRTMSSLRH-RVLPP--------------QL------------LLKFPKEASFCLWLLHPEPSG 351 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~i~~-~~~p~--------------~~------------~~~~p~~~~Li~~~L~~dP~~ 351 (720)
|+|++ ||............+.. +..+. .+ ....+...+|+.+||++||++
T Consensus 195 ~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~ 274 (299)
T 2r3i_A 195 AEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNK 274 (299)
T ss_dssp HHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTT
T ss_pred HHHHhCCCCCCCccHHHHHHHHHHHhCCCchhhhhHhhcCcccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCccc
Confidence 99999 67665544333322221 10000 00 012234459999999999999
Q ss_pred CCChHHHHcCcccCCCccc
Q 004987 352 RPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 352 Rpta~eiL~hp~~~~~~~~ 370 (720)
|||+.|+|+||||+....+
T Consensus 275 Rpt~~~~l~hp~~~~~~~~ 293 (299)
T 2r3i_A 275 RISAKAALAHPFFQDVTKP 293 (299)
T ss_dssp SCCHHHHHTSGGGTTCCCC
T ss_pred CCCHHHHhcChhhhcCCCC
Confidence 9999999999999987544
No 108
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=2e-33 Score=292.41 Aligned_cols=213 Identities=13% Similarity=0.152 Sum_probs=164.3
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004987 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~gI 142 (720)
..+|..++..++||||+++++ ++.... .+|+|||| .+++|.+++... ..+++.+++.++.||+.||.|||++||
T Consensus 52 ~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i 126 (276)
T 2yex_A 52 IKKEICINKMLNHENVVKFYG-HRREGN---IQYLFLEYCSGGELFDRIEPD-IGMPEPDAQRFFHQLMAGVVYLHGIGI 126 (276)
T ss_dssp HHHHHHHHHTCCCTTBCCEEE-EEEETT---EEEEEEECCTTEEGGGGSBTT-TBCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHhcCCCCceeeee-EEEcCC---EEEEEEEecCCCcHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 346777899999999999999 554443 57999999 788999999543 459999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004987 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.++|+|||.+.........
T Consensus 127 ~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~--------------------------------------------- 161 (276)
T 2yex_A 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRE--------------------------------------------- 161 (276)
T ss_dssp ECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE---------------------------------------------
T ss_pred eccCCChHHEEEccCCCEEEeeCCCccccCCCcch---------------------------------------------
Confidence 99999999999999999999998887432111000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCC-Cccccchhhhhhh
Q 004987 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYRLGVLL 301 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~-s~~sDIwSLGvlL 301 (720)
. ......||+.|+|||++.+..+ +.++|||||||++
T Consensus 162 -----------------------~--------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il 198 (276)
T 2yex_A 162 -----------------------R--------------------LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 198 (276)
T ss_dssp -----------------------C--------------------CBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHH
T ss_pred -----------------------h--------------------cccCCccccCccChHHHhcCCCCCCcchHHHHHHHH
Confidence 0 0011468999999999988775 7899999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcC-CCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004987 302 FELFC---PFSTGEEKTRTMSSLRHR-VLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~i~~~-~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
|+|++ ||............+... ...+......+...+|+.+||+.||.+|||+.|+++||||+....
T Consensus 199 ~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~ 270 (276)
T 2yex_A 199 TAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPLK 270 (276)
T ss_dssp HHHHHSSCCCSCSCTTSHHHHHHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCCCC
T ss_pred HHHHhCCCCCCCCchHHHHHHHhhhcccccCchhhcCHHHHHHHHHHCCCCchhCCCHHHHhcCccccChhh
Confidence 99999 666544332233333322 222222233445569999999999999999999999999998754
No 109
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=5.3e-34 Score=308.75 Aligned_cols=213 Identities=16% Similarity=0.235 Sum_probs=161.2
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCC---CCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004987 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAA---IDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~---~~~~~lV~E~~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs 139 (720)
+..+|..++.+++||||+++++ ++..... ...+|+||||.+++|.+++.. .+++.+++.++.||+.||.|||+
T Consensus 69 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~---~~~~~~~~~i~~qi~~al~~LH~ 144 (353)
T 3coi_A 69 RAYRELLLLKHMQHENVIGLLD-VFTPASSLRNFYDFYLVMPFMQTDLQKIMGL---KFSEEKIQYLVYQMLKGLKYIHS 144 (353)
T ss_dssp HHHHHHHHHHHCCCTTBCCCSE-EECSCSSGGGCCCCEEEEECCSEEGGGTTTS---CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCcccHhh-eEecccccccceeEEEEeccccCCHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHH
Confidence 3447888999999999999999 5544332 234699999977899887732 39999999999999999999999
Q ss_pred cCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004987 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||+||||||+|||++.++.+||+|||.+...+..
T Consensus 145 ~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~--------------------------------------------- 179 (353)
T 3coi_A 145 AGVVHRDLKPGNLAVNEDCELKILDFGLARHADAE--------------------------------------------- 179 (353)
T ss_dssp TTCCCSSCCGGGEEECTTCCEEECSTTCTTC-------------------------------------------------
T ss_pred CCcccCCCCHHHEeECCCCcEEEeecccccCCCCC---------------------------------------------
Confidence 99999999999999999999999988877322100
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-CCCCccccchhhh
Q 004987 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLG 298 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~~sDIwSLG 298 (720)
.....||+.|+|||++.+ ..++.++||||||
T Consensus 180 ------------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG 211 (353)
T 3coi_A 180 ------------------------------------------------MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVG 211 (353)
T ss_dssp ----------------------------------------------------CCSBCCSCHHHHSCCSCCCTTHHHHHHH
T ss_pred ------------------------------------------------ccccccCcCcCCHHHHhCcCCCCchhhHHHHH
Confidence 001367999999999987 5689999999999
Q ss_pred hhhhhccc---cCCCCchHHHHHHHhhc-C----------------------------CCCccccccCchHHHHHHHcCC
Q 004987 299 VLLFELFC---PFSTGEEKTRTMSSLRH-R----------------------------VLPPQLLLKFPKEASFCLWLLH 346 (720)
Q Consensus 299 vlL~eLlt---pf~~~~~~~~~~~~i~~-~----------------------------~~p~~~~~~~p~~~~Li~~~L~ 346 (720)
|++|+|++ ||............+.. + .++..+....+...+||.+||+
T Consensus 212 ~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~ 291 (353)
T 3coi_A 212 CIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLE 291 (353)
T ss_dssp HHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSC
T ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcC
Confidence 99999999 66554433221111110 0 0111111233455699999999
Q ss_pred CCCCCCCChHHHHcCcccCCCccchH
Q 004987 347 PEPSGRPKMGELLQSEFLNEPRDSME 372 (720)
Q Consensus 347 ~dP~~Rpta~eiL~hp~~~~~~~~l~ 372 (720)
+||.+|||+.++|+||||+....+..
T Consensus 292 ~dp~~Rpt~~e~l~hp~f~~~~~~~~ 317 (353)
T 3coi_A 292 LDVDKRLTAAQALTHPFFEPFRDPEE 317 (353)
T ss_dssp SCTTTSCCHHHHHTSGGGTTTCCGGG
T ss_pred CCcccCCCHHHHhcCcchhhccCccc
Confidence 99999999999999999998755433
No 110
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=3e-33 Score=306.51 Aligned_cols=213 Identities=17% Similarity=0.193 Sum_probs=161.0
Q ss_pred eehhhhcccCCCCCceecccceeecC----------------------------------CCCCcEEEEEecCCCCHHHH
Q 004987 65 HSDGVELTHGDHLRNQGGLSGVCENE----------------------------------AAIDPFVHAIEWGDVSLRQW 110 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~----------------------------------~~~~~~~lV~E~~g~sL~~~ 110 (720)
.+|..+|..++|||||++++.++... .....+++||||.+++|.+.
T Consensus 48 ~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~ 127 (383)
T 3eb0_A 48 NRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHKV 127 (383)
T ss_dssp CHHHHHHTTCCCTTBCCEEEEEEEC-------------------------------------CCEEEEEECCCSEEHHHH
T ss_pred HHHHHHHHHcCCCCccchhheeeecCcccccccccccccccccccccccccccccccccCCCceEEEEEEecCCccHHHH
Confidence 36888999999999999999544322 22335889999966798888
Q ss_pred Hh---CCCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEc-cCCceEEeccCcccCCCCCCccccccccccc
Q 004987 111 LD---KPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMS-SFNHVSFIESASCSDSGSDSHEEGLNTQNME 186 (720)
Q Consensus 111 L~---~~~~~l~~~~~~~i~~QIl~aL~~LHs~gIvHrDLKP~NILl~-~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~ 186 (720)
+. ..+..+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||.+.......
T Consensus 128 l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~----------- 196 (383)
T 3eb0_A 128 LKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE----------- 196 (383)
T ss_dssp HHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS-----------
T ss_pred HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC-----------
Confidence 73 3455699999999999999999999999999999999999998 68899998888874321110
Q ss_pred ccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCc
Q 004987 187 TKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPM 266 (720)
Q Consensus 187 ~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~ 266 (720)
T Consensus 197 -------------------------------------------------------------------------------- 196 (383)
T 3eb0_A 197 -------------------------------------------------------------------------------- 196 (383)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccccCCcccCCccccCCC-CCccccchhhhhhhhhccc---cCCCCchHHHHHHHhhcCC-----------------
Q 004987 267 KQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRV----------------- 325 (720)
Q Consensus 267 ~~~~~~Gt~~Y~APE~l~~~~-~s~~sDIwSLGvlL~eLlt---pf~~~~~~~~~~~~i~~~~----------------- 325 (720)
......||+.|+|||++.+.. ++.++|||||||++|||++ ||............+....
T Consensus 197 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~ 276 (383)
T 3eb0_A 197 PSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEV 276 (383)
T ss_dssp CCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--C
T ss_pred CCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccc
Confidence 001146799999999998765 8999999999999999999 6766554433333222100
Q ss_pred -CCc--------cccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004987 326 -LPP--------QLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 326 -~p~--------~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
+|. .+....+ ...+||.+||++||.+|||+.|+|+||||+...
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~ 329 (383)
T 3eb0_A 277 RFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDHLR 329 (383)
T ss_dssp CCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGHHHH
T ss_pred cCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcCHHHHHHH
Confidence 110 0111223 345999999999999999999999999998753
No 111
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=3.4e-33 Score=310.18 Aligned_cols=214 Identities=16% Similarity=0.204 Sum_probs=160.2
Q ss_pred eehhhhcccCCCCCceecccceeecCC--CCCcEEEEEecCCCCHHHHHh---CCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004987 65 HSDGVELTHGDHLRNQGGLSGVCENEA--AIDPFVHAIEWGDVSLRQWLD---KPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~--~~~~~~lV~E~~g~sL~~~L~---~~~~~l~~~~~~~i~~QIl~aL~~LHs 139 (720)
.+|..+|.+++|||||++++.++.... ....+++||||.+++|.+++. .....+++..++.++.||+.||.|||+
T Consensus 95 ~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~ 174 (420)
T 1j1b_A 95 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 174 (420)
T ss_dssp CHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEEEECCCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEeehhcccccHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 368889999999999999995544332 223467999997778887763 344569999999999999999999999
Q ss_pred cCceeccCCCCcEEEccC-CceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCC
Q 004987 140 QGIVVHNVRPSCFVMSSF-NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~-~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~ 218 (720)
+||+||||||+|||++.+ +.+||+|||+++......
T Consensus 175 ~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~~~~------------------------------------------- 211 (420)
T 1j1b_A 175 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE------------------------------------------- 211 (420)
T ss_dssp TTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTTC-------------------------------------------
T ss_pred CCccccCCChhhEEEeCCCCeEEeccchhhhhcccCC-------------------------------------------
Confidence 999999999999999955 568998888774321100
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-CCCccccchhh
Q 004987 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRL 297 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~~sDIwSL 297 (720)
.....+||++|+|||++.+. .++.++|||||
T Consensus 212 ------------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSl 243 (420)
T 1j1b_A 212 ------------------------------------------------PNVSYICSRYYRAPELIFGATDYTSSIDVWSA 243 (420)
T ss_dssp ------------------------------------------------CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHH
T ss_pred ------------------------------------------------CceeeeeCCCcCCHHHHcCCCCCCchhhhHHH
Confidence 00114789999999999775 59999999999
Q ss_pred hhhhhhccc---cCCCCchHHHHHHHhhc------------------CCCCcc--------cccc-CchHHHHHHHcCCC
Q 004987 298 GVLLFELFC---PFSTGEEKTRTMSSLRH------------------RVLPPQ--------LLLK-FPKEASFCLWLLHP 347 (720)
Q Consensus 298 GvlL~eLlt---pf~~~~~~~~~~~~i~~------------------~~~p~~--------~~~~-~p~~~~Li~~~L~~ 347 (720)
||++|||++ ||............+.. ..+|.. +... .+...+||.+||++
T Consensus 244 G~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~ 323 (420)
T 1j1b_A 244 GCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEY 323 (420)
T ss_dssp HHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCS
T ss_pred HHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccC
Confidence 999999999 67665543333222211 001100 1112 23455999999999
Q ss_pred CCCCCCChHHHHcCcccCCCcc
Q 004987 348 EPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 348 dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
||.+|||+.|+|+||||.....
T Consensus 324 dP~~R~t~~e~l~hp~f~~~~~ 345 (420)
T 1j1b_A 324 TPTARLTPLEACAHSFFDELRD 345 (420)
T ss_dssp SGGGSCCHHHHHTSGGGGGGGC
T ss_pred ChhHCCCHHHHhCCHhhccccc
Confidence 9999999999999999987643
No 112
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=3.1e-33 Score=311.33 Aligned_cols=197 Identities=16% Similarity=0.216 Sum_probs=150.4
Q ss_pred CCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEE
Q 004987 75 DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFV 153 (720)
Q Consensus 75 ~HpnIV~l~~~~~~~~~~~~~~~lV~E~~g~sL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~~LHs~gIvHrDLKP~NIL 153 (720)
+||||+++++ ++.... .+|+||||.+++|.+++... ...+++..++.|+.||+.||.|||++|||||||||+|||
T Consensus 157 ~~~~iv~~~~-~~~~~~---~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIL 232 (429)
T 3kvw_A 157 NTMNVIHMLE-NFTFRN---HICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENIL 232 (429)
T ss_dssp SCSCBCCEEE-EEEETT---EEEEEECCCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEE
T ss_pred CCcCEEEEEe-ecccCC---eEEEEEeccCCCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeE
Confidence 7889999999 554443 68999999778999999443 345999999999999999999999999999999999999
Q ss_pred EccCCc--eEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccCCCc
Q 004987 154 MSSFNH--VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSA 231 (720)
Q Consensus 154 l~~~~~--vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~ 231 (720)
++.++. +||+|||++...+..
T Consensus 233 l~~~~~~~vkL~DFG~a~~~~~~--------------------------------------------------------- 255 (429)
T 3kvw_A 233 LKQQGRSGIKVIDFGSSCYEHQR--------------------------------------------------------- 255 (429)
T ss_dssp ESSTTSCCEEECCCTTCEETTCC---------------------------------------------------------
T ss_pred EccCCCcceEEeecccceecCCc---------------------------------------------------------
Confidence 998887 999888876321100
Q ss_pred cccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhccc---cC
Q 004987 232 YGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PF 308 (720)
Q Consensus 232 ~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGvlL~eLlt---pf 308 (720)
....+||+.|+|||++.+..++.++|||||||++|||++ ||
T Consensus 256 ------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf 299 (429)
T 3kvw_A 256 ------------------------------------VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLL 299 (429)
T ss_dssp ------------------------------------CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred ------------------------------------ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCC
Confidence 011478999999999999999999999999999999999 56
Q ss_pred CCCchHHHHHHHhhc-CCCCccc-------------------------------------------------------c-
Q 004987 309 STGEEKTRTMSSLRH-RVLPPQL-------------------------------------------------------L- 331 (720)
Q Consensus 309 ~~~~~~~~~~~~i~~-~~~p~~~-------------------------------------------------------~- 331 (720)
............+.. +..++.+ .
T Consensus 300 ~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 379 (429)
T 3kvw_A 300 PGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKG 379 (429)
T ss_dssp CCSSHHHHHHHHHHHHCCCCHHHHHTBTTHHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTT
T ss_pred CCCCHHHHHHHHHHHcCCCCHHHHHhhhhhhhccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccc
Confidence 555443222221111 1111100 0
Q ss_pred ccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004987 332 LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 332 ~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
...+...+||.+||++||.+|||+.|+|+||||+...
T Consensus 380 ~~~~~~~dli~~~L~~dP~~Rpta~e~L~Hpw~~~~~ 416 (429)
T 3kvw_A 380 CDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRRRL 416 (429)
T ss_dssp CCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTTC---
T ss_pred cchHHHHHHHHHHCCCChhhCCCHHHHhCChhhccCC
Confidence 0123456999999999999999999999999999763
No 113
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=8.1e-34 Score=307.96 Aligned_cols=208 Identities=18% Similarity=0.194 Sum_probs=160.9
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHc-
Q 004987 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ- 140 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~- 140 (720)
+..+|..+|.+++||||+++++ ++..+. .+|+|||| .|++|.+++...+ .+++..+..++.||+.||.|||++
T Consensus 77 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~~i~~~l~~lh~~~ 151 (360)
T 3eqc_A 77 QIIRELQVLHECNSPYIVGFYG-AFYSDG---EISICMEHMDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLREKH 151 (360)
T ss_dssp HHHHHHGGGGGCCCTTBCCEEE-EEEETT---EEEEEECCCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCEEEEeE-EEEECC---EEEEEEECCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHhC
Confidence 3447888999999999999999 554443 57999999 7899999995543 499999999999999999999996
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004987 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+|||++.++.++|+|||.+......
T Consensus 152 ~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~---------------------------------------------- 185 (360)
T 3eqc_A 152 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---------------------------------------------- 185 (360)
T ss_dssp CCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH----------------------------------------------
T ss_pred CEEcCCccHHHEEECCCCCEEEEECCCCcccccc----------------------------------------------
Confidence 9999999999999999999999988876211000
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhh
Q 004987 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
......||+.|+|||++.+..++.++|||||||+
T Consensus 186 ----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~i 219 (360)
T 3eqc_A 186 ----------------------------------------------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLS 219 (360)
T ss_dssp ----------------------------------------------C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHH
T ss_pred ----------------------------------------------cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHH
Confidence 0011468999999999999999999999999999
Q ss_pred hhhccc---cCCCCchHHH-----------------------------------------HHHHhhcCCCCccccccCc-
Q 004987 301 LFELFC---PFSTGEEKTR-----------------------------------------TMSSLRHRVLPPQLLLKFP- 335 (720)
Q Consensus 301 L~eLlt---pf~~~~~~~~-----------------------------------------~~~~i~~~~~p~~~~~~~p- 335 (720)
+|+|++ ||........ ....+.....+......++
T Consensus 220 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (360)
T 3eqc_A 220 LVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSL 299 (360)
T ss_dssp HHHHHHTSCCSSCCCHHHHHHHHC------------------------------CCCHHHHHHHHHHSCCCCCCTTTSCH
T ss_pred HHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcccccccCCCCcccchhhhhHHhccCCCCCCcccccH
Confidence 999999 6655433211 1111112222222222233
Q ss_pred hHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004987 336 KEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 336 ~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
...+||.+||++||.+|||+.|+|+||||+..
T Consensus 300 ~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 331 (360)
T 3eqc_A 300 EFQDFVNKCLIKNPAERADLKQLMVHAFIKRS 331 (360)
T ss_dssp HHHHHHHHHHCSSTTTSCCHHHHHTSHHHHHH
T ss_pred HHHHHHHHHhhcChhhCCCHHHHhhChHhhcc
Confidence 44599999999999999999999999999864
No 114
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=2e-33 Score=296.61 Aligned_cols=209 Identities=17% Similarity=0.287 Sum_probs=160.2
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004987 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~g 141 (720)
+..+|..++.+++||||+++++ ++.... .+|+|||| .|++|.+++...+ .+++.+++.++.||+.||.|||++|
T Consensus 57 ~~~~e~~~l~~l~hp~iv~~~~-~~~~~~---~~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~ 131 (294)
T 4eqm_A 57 RFEREVHNSSQLSHQNIVSMID-VDEEDD---CYYLVMEYIEGPTLSEYIESHG-PLSVDTAINFTNQILDGIKHAHDMR 131 (294)
T ss_dssp HHHHHHHHHTTCCBTTBCCEEE-EEECSS---EEEEEEECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhcCCCCCCceEEE-eeeeCC---eEEEEEeCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 4557888999999999999999 555443 67999999 8999999995543 4999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004987 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||++.........
T Consensus 132 i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-------------------------------------------- 167 (294)
T 4eqm_A 132 IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLT-------------------------------------------- 167 (294)
T ss_dssp CCCCCCCGGGEEECTTSCEEECCCSSSTTC--------------------------------------------------
T ss_pred cccCCCCHHHEEECCCCCEEEEeCCCcccccccccc--------------------------------------------
Confidence 999999999999999999999999887433111000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004987 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGvlL 301 (720)
......||+.|+|||++.+..++.++|||||||++
T Consensus 168 ---------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l 202 (294)
T 4eqm_A 168 ---------------------------------------------QTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVL 202 (294)
T ss_dssp ----------------------------------------------------CCSSCCHHHHHTCCCCTTHHHHHHHHHH
T ss_pred ---------------------------------------------ccCccccCccccCHhHhcCCCCCchHhHHHHHHHH
Confidence 00114689999999999999999999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCc--cccccCch-HHHHHHHcCCCCCCCCCChHHHHcCcccC
Q 004987 302 FELFC---PFSTGEEKTRTMSSLRHRVLPP--QLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQSEFLN 365 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~i~~~~~p~--~~~~~~p~-~~~Li~~~L~~dP~~Rpta~eiL~hp~~~ 365 (720)
|+|++ ||............+.....+. ......|. ..+++.+||.+||.+||+..+.+.++|..
T Consensus 203 ~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~ 272 (294)
T 4eqm_A 203 YEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSS 272 (294)
T ss_dssp HHHHHSSCSSCSSCHHHHHHHHHSSCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHT
T ss_pred HHHHhCCCCCCCCChHHHHHHHhhccCCCcchhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHH
Confidence 99999 7776665555555554433221 22333444 45999999999999999555555555543
No 115
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.3e-33 Score=302.12 Aligned_cols=218 Identities=18% Similarity=0.199 Sum_probs=163.3
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC---------------------------
Q 004987 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP--------------------------- 114 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~--------------------------- 114 (720)
+..+|..++.+++|||||++++ ++.+.. .+++|||| .|++|.+++...
T Consensus 74 ~~~~E~~~l~~l~hpniv~~~~-~~~~~~---~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (345)
T 3hko_A 74 RIKTEVRLMKKLHHPNIARLYE-VYEDEQ---YICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEA 149 (345)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EEECSS---EEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCcceeeh-hhccCC---eEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccc
Confidence 3446888999999999999999 555543 67999999 899999998410
Q ss_pred ------------CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEccCC--ceEEeccCcccCCCCCCccccc
Q 004987 115 ------------KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFN--HVSFIESASCSDSGSDSHEEGL 180 (720)
Q Consensus 115 ------------~~~l~~~~~~~i~~QIl~aL~~LHs~gIvHrDLKP~NILl~~~~--~vkliDfg~a~~~g~~~~~~~~ 180 (720)
...+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||.+.........
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~--- 226 (345)
T 3hko_A 150 INGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNG--- 226 (345)
T ss_dssp HHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC---
T ss_pred cccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEecCCCceEEEeeccccccccccCcc---
Confidence 11246788999999999999999999999999999999998766 8999988887432110000
Q ss_pred ccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcc
Q 004987 181 NTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEK 260 (720)
Q Consensus 181 ~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~ 260 (720)
.
T Consensus 227 ----------------------------~--------------------------------------------------- 227 (345)
T 3hko_A 227 ----------------------------E--------------------------------------------------- 227 (345)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ----------------------------c---------------------------------------------------
Confidence 0
Q ss_pred cCCCCccccccccCCcccCCccccC--CCCCccccchhhhhhhhhccc---cCCCCchHHHHHHHhhcCC-CC-cccccc
Q 004987 261 KQPFPMKQILLMETNWYASPEELAG--APVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRV-LP-PQLLLK 333 (720)
Q Consensus 261 ~~~~~~~~~~~~Gt~~Y~APE~l~~--~~~s~~sDIwSLGvlL~eLlt---pf~~~~~~~~~~~~i~~~~-~p-~~~~~~ 333 (720)
........||+.|+|||++.+ ..++.++|||||||++|||++ ||............+.... ++ +.....
T Consensus 228 ----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (345)
T 3hko_A 228 ----YYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVL 303 (345)
T ss_dssp -----------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCTTSGGGGGS
T ss_pred ----cccccccCCCccccCchhhccCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHhcccccCCcccccC
Confidence 000011468999999999976 558999999999999999999 7766555443333333322 22 222223
Q ss_pred CchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCccc
Q 004987 334 FPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 334 ~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
.+...+||.+||.+||.+||++.++|+||||+.....
T Consensus 304 ~~~~~~li~~~l~~~p~~Rps~~~~l~hp~~~~~~~~ 340 (345)
T 3hko_A 304 SPLARDLLSNLLNRNVDERFDAMRALQHPWISQFSDK 340 (345)
T ss_dssp CHHHHHHHHHHSCSCTTTSCCHHHHHHSHHHHTTSSC
T ss_pred CHHHHHHHHHHcCCChhHCCCHHHHhcChhhccChHh
Confidence 4555699999999999999999999999999987543
No 116
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=5.2e-33 Score=296.68 Aligned_cols=213 Identities=16% Similarity=0.209 Sum_probs=159.4
Q ss_pred ehhhhccc---CCCCCceecccceeec-CCCCCcEEEEEecCCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004987 66 SDGVELTH---GDHLRNQGGLSGVCEN-EAAIDPFVHAIEWGDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 66 ~e~~~L~~---l~HpnIV~l~~~~~~~-~~~~~~~~lV~E~~g~sL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~~LHs~ 140 (720)
+|..++.. +.||||+++++.+... ......+++||||.+++|.+++... ...+++..++.++.||+.||.|||++
T Consensus 60 ~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~ 139 (326)
T 1blx_A 60 REVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH 139 (326)
T ss_dssp HHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhhhccCCCCeEeeeeeeeecccCCCceEEEEEecCCCCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 44445544 4899999999943321 1233468999999667999999543 34599999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004987 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+|||++.++.++|+|||.+...+...
T Consensus 140 gi~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~--------------------------------------------- 174 (326)
T 1blx_A 140 RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQM--------------------------------------------- 174 (326)
T ss_dssp TCCCCCCCGGGEEECTTCCEEECSCCSCCCCCGGG---------------------------------------------
T ss_pred CceeccCCHHHeEEcCCCCEEEecCcccccccCCC---------------------------------------------
Confidence 99999999999999999999999888874321100
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhh
Q 004987 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
......||+.|+|||++.+..++.++|||||||+
T Consensus 175 ----------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i 208 (326)
T 1blx_A 175 ----------------------------------------------ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCI 208 (326)
T ss_dssp ----------------------------------------------GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHH
T ss_pred ----------------------------------------------CccccccccceeCHHHHhcCCCCcchhHHHHHHH
Confidence 0011468999999999999889999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCC------------------------ccccccCch-HHHHHHHcCCCCCCCC
Q 004987 301 LFELFC---PFSTGEEKTRTMSSLRHRVLP------------------------PQLLLKFPK-EASFCLWLLHPEPSGR 352 (720)
Q Consensus 301 L~eLlt---pf~~~~~~~~~~~~i~~~~~p------------------------~~~~~~~p~-~~~Li~~~L~~dP~~R 352 (720)
+|+|++ ||............+.....+ ..+....+. ..+||.+||++||.+|
T Consensus 209 l~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 288 (326)
T 1blx_A 209 FAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKR 288 (326)
T ss_dssp HHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTS
T ss_pred HHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccC
Confidence 999999 666554433222222110000 011122333 3599999999999999
Q ss_pred CChHHHHcCcccCCCcc
Q 004987 353 PKMGELLQSEFLNEPRD 369 (720)
Q Consensus 353 pta~eiL~hp~~~~~~~ 369 (720)
||+.|+|+||||+....
T Consensus 289 pt~~e~l~hp~~~~~~~ 305 (326)
T 1blx_A 289 ISAYSALSHPYFQDLER 305 (326)
T ss_dssp CCHHHHHTSGGGTTCCC
T ss_pred CCHHHHhcCccccccch
Confidence 99999999999998744
No 117
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=9.1e-35 Score=317.95 Aligned_cols=203 Identities=12% Similarity=0.091 Sum_probs=149.3
Q ss_pred ehh---hhcccCCCCCceecccc------eeecCCC------------C--CcEEEEEecCCCCHHHHHhCCCC------
Q 004987 66 SDG---VELTHGDHLRNQGGLSG------VCENEAA------------I--DPFVHAIEWGDVSLRQWLDKPKR------ 116 (720)
Q Consensus 66 ~e~---~~L~~l~HpnIV~l~~~------~~~~~~~------------~--~~~~lV~E~~g~sL~~~L~~~~~------ 116 (720)
+|. .+|++++|||||++++. +++.... . ...|++|||.+|+|.+++...+.
T Consensus 122 ~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~~g~L~~~l~~~~~~~~~~~ 201 (377)
T 3byv_A 122 EEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHK 201 (377)
T ss_dssp HHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEECTTSCSEEEC------CEEESEEEEEECCSEEHHHHHHHHHHTTTTTH
T ss_pred HHHHHHHhccccCCHHHHHHHhhhhhhhhhhhccCCccccccccCCCceEEEEEEEEEeccCCCHHHHHHhccccccccc
Confidence 555 67788899999999942 2332211 0 13789999988899999954321
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCch
Q 004987 117 SVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPL 196 (720)
Q Consensus 117 ~l~~~~~~~i~~QIl~aL~~LHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 196 (720)
.+++..++.|+.||+.||.|||++||+||||||+|||++.++.+||+|||++...+..
T Consensus 202 ~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~---------------------- 259 (377)
T 3byv_A 202 SLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAR---------------------- 259 (377)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCGGGCEETTCE----------------------
T ss_pred cccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEechhheecCCc----------------------
Confidence 1334888899999999999999999999999999999999999999888877321100
Q ss_pred hhHhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCc
Q 004987 197 DMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNW 276 (720)
Q Consensus 197 d~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~ 276 (720)
.....| +.
T Consensus 260 -----------------------------------------------------------------------~~~~~g-~~ 267 (377)
T 3byv_A 260 -----------------------------------------------------------------------VVSSVS-RG 267 (377)
T ss_dssp -----------------------------------------------------------------------EECCCC-TT
T ss_pred -----------------------------------------------------------------------ccCCCC-cC
Confidence 011467 99
Q ss_pred ccCCccccCC-----------CCCccccchhhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHH
Q 004987 277 YASPEELAGA-----------PVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCL 342 (720)
Q Consensus 277 Y~APE~l~~~-----------~~s~~sDIwSLGvlL~eLlt---pf~~~~~~~~~~~~i~~~~~p~~~~~~~p~~~~Li~ 342 (720)
|+|||++.+. .++.++|||||||++|||++ ||...... .....+.. ......+...+||.
T Consensus 268 y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~-~~~~~~~~-----~~~~~~~~~~~li~ 341 (377)
T 3byv_A 268 FEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAAL-GGSEWIFR-----SCKNIPQPVRALLE 341 (377)
T ss_dssp CCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSSCCC-------CCSGGGGS-----SCCCCCHHHHHHHH
T ss_pred ccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHCCCCCcccccc-cchhhhhh-----hccCCCHHHHHHHH
Confidence 9999999887 79999999999999999999 45432211 01111111 11122344569999
Q ss_pred HcCCCCCCCCCChHHHHcCcccCCCc
Q 004987 343 WLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 343 ~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
+||.+||.+|||+.|+|+||||+...
T Consensus 342 ~~L~~dp~~Rpt~~e~l~hp~f~~~~ 367 (377)
T 3byv_A 342 GFLRYPKEDRLLPLQAMETPEYEQLR 367 (377)
T ss_dssp HHTCSSGGGCCCHHHHHTSHHHHHHH
T ss_pred HHcCCCchhCCCHHHHhhChHHHHHH
Confidence 99999999999999999999998753
No 118
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=2.1e-33 Score=301.32 Aligned_cols=209 Identities=20% Similarity=0.257 Sum_probs=158.3
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004987 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~gI 142 (720)
..+|..++.+++||||+++++ ++.... .+|+|||| .+++|.+++... ..+++..++.++.||+.||.|||++||
T Consensus 71 ~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~i 145 (331)
T 4aaa_A 71 AMREIKLLKQLRHENLVNLLE-VCKKKK---RWYLVFEFVDHTILDDLELFP-NGLDYQVVQKYLFQIINGIGFCHSHNI 145 (331)
T ss_dssp HHHHHHHHHHCCCTTBCCEEE-EEEETT---EEEEEEECCSEEHHHHHHHST-TCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhhCCCCCEeeEEE-EeecCC---EEEEEEecCCcchHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence 347888999999999999999 555443 57999999 777787776444 349999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004987 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.++|+|||.+........
T Consensus 146 vH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~---------------------------------------------- 179 (331)
T 4aaa_A 146 IHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE---------------------------------------------- 179 (331)
T ss_dssp CCCCCCGGGEEECTTSCEEECCCTTC------------------------------------------------------
T ss_pred EccCcChheEEEcCCCcEEEEeCCCceeecCCcc----------------------------------------------
Confidence 9999999999999999999998888743211100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-CCCccccchhhhhhh
Q 004987 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLL 301 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~~sDIwSLGvlL 301 (720)
......||++|+|||++.+. .++.++|||||||++
T Consensus 180 --------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il 215 (331)
T 4aaa_A 180 --------------------------------------------VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLV 215 (331)
T ss_dssp ------------------------------------------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHH
T ss_pred --------------------------------------------ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHH
Confidence 00113689999999999876 589999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhc-CCCCc------------------c----------ccccCchHHHHHHHcCCCCC
Q 004987 302 FELFC---PFSTGEEKTRTMSSLRH-RVLPP------------------Q----------LLLKFPKEASFCLWLLHPEP 349 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~i~~-~~~p~------------------~----------~~~~~p~~~~Li~~~L~~dP 349 (720)
|+|++ ||............+.. +..++ . .....+...+||.+||++||
T Consensus 216 ~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP 295 (331)
T 4aaa_A 216 TEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDP 295 (331)
T ss_dssp HHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSG
T ss_pred HHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCc
Confidence 99999 67665443322222110 11100 0 01122344599999999999
Q ss_pred CCCCChHHHHcCcccCCC
Q 004987 350 SGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 350 ~~Rpta~eiL~hp~~~~~ 367 (720)
.+|||+.|+|+||||+..
T Consensus 296 ~~Rpt~~ell~hp~f~~~ 313 (331)
T 4aaa_A 296 DKRPFCAELLHHDFFQMD 313 (331)
T ss_dssp GGSCCGGGGGGSHHHHGG
T ss_pred ccCCCHHHHhcCchhccC
Confidence 999999999999999875
No 119
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=2.4e-33 Score=302.86 Aligned_cols=207 Identities=17% Similarity=0.203 Sum_probs=159.6
Q ss_pred ehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004987 66 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~gIv 143 (720)
+|..+|.++ +|||||++++ +++++. .+|+|||| .|++|.+++...+ .+++.+++.++.||+.||.|||++||+
T Consensus 64 ~E~~~l~~~~~hp~iv~~~~-~~~~~~---~~~lv~E~~~gg~L~~~i~~~~-~~~~~~~~~~~~qi~~al~~lH~~giv 138 (342)
T 2qr7_A 64 EEIEILLRYGQHPNIITLKD-VYDDGK---YVYVVTELMKGGELLDKILRQK-FFSEREASAVLFTITKTVEYLHAQGVV 138 (342)
T ss_dssp HHHHHHHHHTTSTTBCCEEE-EEECSS---EEEEEECCCCSCBHHHHHHTCT-TCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHhcCCCCcCeEEE-EEEcCC---EEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCcE
Confidence 455567666 7999999999 665543 67999999 8999999996544 499999999999999999999999999
Q ss_pred eccCCCCcEEEccC----CceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004987 144 VHNVRPSCFVMSSF----NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 144 HrDLKP~NILl~~~----~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
||||||+|||+... +.+||+|||++....... .
T Consensus 139 HrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~---------------------------------~---------- 175 (342)
T 2qr7_A 139 HRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN---------------------------------G---------- 175 (342)
T ss_dssp CSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTT---------------------------------C----------
T ss_pred eccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCC---------------------------------C----------
Confidence 99999999998543 348998888774321100 0
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhh
Q 004987 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
.....+||+.|+|||++.+..++.++|||||||
T Consensus 176 -----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~ 208 (342)
T 2qr7_A 176 -----------------------------------------------LLMTPCYTANFVAPEVLERQGYDAACDIWSLGV 208 (342)
T ss_dssp -----------------------------------------------CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------------------ceeccCCCccccCHHHhcCCCCCCccCeeeHhH
Confidence 001146899999999998888999999999999
Q ss_pred hhhhccc---cCCCC--chHHHHHHHhhcCCCC--ccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004987 300 LLFELFC---PFSTG--EEKTRTMSSLRHRVLP--PQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 300 lL~eLlt---pf~~~--~~~~~~~~~i~~~~~p--~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
++|||++ ||... ......+..+..+.++ ...+... +...+||.+||++||.+|||+.++|+||||...
T Consensus 209 il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~hp~~~~~ 284 (342)
T 2qr7_A 209 LLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVHW 284 (342)
T ss_dssp HHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCCCCCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHTG
T ss_pred HHHHHhcCCCCCCCCCcCCHHHHHHHHccCCcccCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCCeecCc
Confidence 9999999 66542 2333455555544332 2222333 445599999999999999999999999999653
No 120
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=99.98 E-value=6.1e-33 Score=294.95 Aligned_cols=208 Identities=16% Similarity=0.220 Sum_probs=161.7
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004987 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~g 141 (720)
+..+|..+|.+++||||+++++ ++..+ .+++|||| .|++|.+++......+++.+++.++.||+.||.|||++|
T Consensus 78 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ 152 (307)
T 3lb7_A 78 AFRNEVAVLRKTRHVNILLFMG-YMTKD----NLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKN 152 (307)
T ss_dssp HHHHHHHHHTTCCCTTBCCEEE-EECSS----SCEEEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCEEEEEE-EEccC----cEEEEEecCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3347888999999999999999 55433 36899999 899999999766667999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004987 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||++.........
T Consensus 153 ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~~-------------------------------------------- 188 (307)
T 3lb7_A 153 IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGS-------------------------------------------- 188 (307)
T ss_dssp CCCSCCCSSSEEECTTSCEEECCCCSSCC---------------------------------------------------
T ss_pred EeeCCCChhhEEEcCCCCEEEccCCCceeccccccc--------------------------------------------
Confidence 999999999999999999999998887432110000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCcccc---CCCCCccccchhhh
Q 004987 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA---GAPVSCASDIYRLG 298 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~---~~~~s~~sDIwSLG 298 (720)
.......||+.|+|||++. +..++.++||||||
T Consensus 189 --------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG 224 (307)
T 3lb7_A 189 --------------------------------------------QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYG 224 (307)
T ss_dssp -------------------------------------------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHH
T ss_pred --------------------------------------------ccccCCCCCcceECcceeeccCCCCCCchhhHHHHH
Confidence 0001146899999999996 55589999999999
Q ss_pred hhhhhccc---cCCCCchHHHHHHHhhcCCCCccc---cccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcc
Q 004987 299 VLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQL---LLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEF 363 (720)
Q Consensus 299 vlL~eLlt---pf~~~~~~~~~~~~i~~~~~p~~~---~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~ 363 (720)
|++|||++ ||............+.....++.+ ...+| ...+|+.+||+.||.+||++.|++++.+
T Consensus 225 ~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~ 296 (307)
T 3lb7_A 225 IVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIE 296 (307)
T ss_dssp HHHHHHHHSSCTTTTCCCHHHHHHHHHHTCCCCCSTTSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHH
T ss_pred HHHHHHHhCCCCCccCCcHHHHHHHHhcCCCCcchhhhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHH
Confidence 99999999 776655554444444444333332 23334 4459999999999999999999998543
No 121
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=99.98 E-value=4.3e-33 Score=298.06 Aligned_cols=208 Identities=14% Similarity=0.202 Sum_probs=157.4
Q ss_pred eeehhhhcccCC-CCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004987 64 KHSDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 64 ~~~e~~~L~~l~-HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~g 141 (720)
..+|..+|.++. ||||+++++ ++.... ....++|||| .+++|.+++.. +++.+++.++.||+.||.|||++|
T Consensus 77 ~~~E~~~l~~l~~~~~i~~~~~-~~~~~~-~~~~~lv~e~~~~~~l~~~~~~----~~~~~~~~~~~qi~~~l~~lH~~~ 150 (330)
T 3nsz_A 77 IKREIKILENLRGGPNIITLAD-IVKDPV-SRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCHSMG 150 (330)
T ss_dssp HHHHHHHHHHHTTSTTBCCEEE-EEECTT-TCCEEEEEECCCCCCHHHHGGG----CCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCCCCEEEeee-eeccCC-CCceEEEEeccCchhHHHHHHh----CCHHHHHHHHHHHHHHHHHHHhCC
Confidence 347788899987 999999999 554432 2367999999 88999998843 899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCC-ceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004987 142 IVVHNVRPSCFVMSSFN-HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~-~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
|+||||||+|||++.++ .++|+|||++.......
T Consensus 151 ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~--------------------------------------------- 185 (330)
T 3nsz_A 151 IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ--------------------------------------------- 185 (330)
T ss_dssp EECCCCSGGGEEEETTTTEEEECCCTTCEECCTTC---------------------------------------------
T ss_pred eeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCC---------------------------------------------
Confidence 99999999999999776 89998888774321110
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-CCCCccccchhhhh
Q 004987 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGV 299 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~~sDIwSLGv 299 (720)
......||+.|+|||++.+ ..++.++|||||||
T Consensus 186 ----------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~ 219 (330)
T 3nsz_A 186 ----------------------------------------------EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGC 219 (330)
T ss_dssp ----------------------------------------------CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHH
T ss_pred ----------------------------------------------ccccccccccccChhhhcCCCcCCchhhHHHHHH
Confidence 0011367999999999987 55899999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhh-------------c--CCCCcc--------------------ccc-cCchHHHH
Q 004987 300 LLFELFC---PFSTGEEKTRTMSSLR-------------H--RVLPPQ--------------------LLL-KFPKEASF 340 (720)
Q Consensus 300 lL~eLlt---pf~~~~~~~~~~~~i~-------------~--~~~p~~--------------------~~~-~~p~~~~L 340 (720)
++|+|++ ||.........+..+. . ...++. ... ..+...+|
T Consensus 220 il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 299 (330)
T 3nsz_A 220 MLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDF 299 (330)
T ss_dssp HHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHH
T ss_pred HHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccccccchhhhhhhccccchhhhccccccccCCHHHHHH
Confidence 9999999 6644322211111110 0 011111 011 23445699
Q ss_pred HHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004987 341 CLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 341 i~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
|.+||++||.+|||++|+|+||||+...
T Consensus 300 i~~~L~~dP~~Rpta~e~l~hp~f~~~~ 327 (330)
T 3nsz_A 300 LDKLLRYDHQSRLTAREAMEHPYFYTVV 327 (330)
T ss_dssp HHTTSCSSGGGSCCHHHHHTSGGGTTCC
T ss_pred HHHHhcCCcccCCCHHHHhcCccHhhhc
Confidence 9999999999999999999999999863
No 122
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=99.98 E-value=3.8e-33 Score=318.00 Aligned_cols=207 Identities=16% Similarity=0.205 Sum_probs=163.8
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC---CCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004987 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---KRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~---~~~l~~~~~~~i~~QIl~aL~~LHs~ 140 (720)
.+|..+|.+++|||||++++ ++++.. .+|+|||| .|++|.+++... ...+++..++.|+.||+.||.|||++
T Consensus 233 ~~E~~iL~~l~hp~Iv~l~~-~~~~~~---~l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~ 308 (543)
T 3c4z_A 233 MVEKKILAKVHSRFIVSLAY-AFETKT---DLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR 308 (543)
T ss_dssp HHHHHHHHHCCCTTBCCEEE-EEECSS---EEEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhcCCCCEeeEEE-EEeeCC---EEEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc
Confidence 36778999999999999999 555543 57999999 899999999543 34599999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004987 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+|||++.+|++||+|||++........
T Consensus 309 gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~~-------------------------------------------- 344 (543)
T 3c4z_A 309 NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT-------------------------------------------- 344 (543)
T ss_dssp TEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCC--------------------------------------------
T ss_pred CCcccCCChHHEEEeCCCCEEEeecceeeeccCCCc--------------------------------------------
Confidence 999999999999999999999998888743211100
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhh
Q 004987 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
.....+||+.|+|||++.+..|+.++|||||||+
T Consensus 345 ----------------------------------------------~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvi 378 (543)
T 3c4z_A 345 ----------------------------------------------KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVT 378 (543)
T ss_dssp ----------------------------------------------CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHH
T ss_pred ----------------------------------------------ccccccCCccccChhhhcCCCCChHHhcCcchHH
Confidence 0011478999999999999999999999999999
Q ss_pred hhhccc---cCCCCc---hHHHHHHHhhcCCCCcccccc-CchHHHHHHHcCCCCCCCCCC-----hHHHHcCcccCCC
Q 004987 301 LFELFC---PFSTGE---EKTRTMSSLRHRVLPPQLLLK-FPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEP 367 (720)
Q Consensus 301 L~eLlt---pf~~~~---~~~~~~~~i~~~~~p~~~~~~-~p~~~~Li~~~L~~dP~~Rpt-----a~eiL~hp~~~~~ 367 (720)
+|||++ ||.... ........+..... .++.. .+...+||.+||++||.+||+ +++|++||||+..
T Consensus 379 lyelltG~~PF~~~~~~~~~~~~~~~i~~~~~--~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~Hpff~~i 455 (543)
T 3c4z_A 379 LYEMIAARGPFRARGEKVENKELKQRVLEQAV--TYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDI 455 (543)
T ss_dssp HHHHHHSSCSSCCTTCCCCHHHHHHHHHHCCC--CCCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTSGGGTTC
T ss_pred HHHHHhCCCCCCCCccchhHHHHHHHHhhccc--CCCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHcCccccCC
Confidence 999999 665532 22233333333221 11222 344559999999999999995 5899999999986
No 123
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=99.98 E-value=1.5e-32 Score=291.82 Aligned_cols=212 Identities=13% Similarity=0.163 Sum_probs=165.6
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004987 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~gI 142 (720)
..+|..++.+++||||+++++ ++.... .+|+|||| .+++|.+++......+++.+++.++.||+.||.|||++||
T Consensus 71 ~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i 146 (314)
T 3com_A 71 IIKEISIMQQCDSPHVVKYYG-SYFKNT---DLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRK 146 (314)
T ss_dssp HHHHHHHHHTCCCTTBCCEEE-EEEETT---EEEEEEECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHhCCCCCCccEEE-EEEeCC---EEEEEeecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCC
Confidence 346778999999999999999 444432 57999999 7889999996445569999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004987 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+|+||||+||+++.++.++|+|||.+........
T Consensus 147 ~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~---------------------------------------------- 180 (314)
T 3com_A 147 IHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMA---------------------------------------------- 180 (314)
T ss_dssp ECCCCSGGGEEECTTCCEEECCCTTCEECBTTBS----------------------------------------------
T ss_pred cCCCcCHHHEEECCCCCEEEeecccchhhhhhcc----------------------------------------------
Confidence 9999999999999999999998888733211100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004987 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGvlL~ 302 (720)
......||+.|+|||++.+..++.++|||||||++|
T Consensus 181 --------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ 216 (314)
T 3com_A 181 --------------------------------------------KRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAI 216 (314)
T ss_dssp --------------------------------------------CBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHH
T ss_pred --------------------------------------------ccCccCCCCCccChhhcCCCCCCccccHHHHHHHHH
Confidence 001146899999999999988999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004987 303 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~i~~~~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
+|++ ||.........................++ ...+||.+||..||.+|||+.++|+||||+....
T Consensus 217 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~~~~~~~~~ 287 (314)
T 3com_A 217 EMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQHPFVRSAKG 287 (314)
T ss_dssp HHHHSSCTTTTSCHHHHHHHHHHSCCCCCSSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHTCCC
T ss_pred HHHhCCCCCCCCChHHHHHHHhcCCCcccCCcccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhcCCc
Confidence 9999 66554443332222222211111223333 4459999999999999999999999999998754
No 124
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=99.98 E-value=5.2e-33 Score=301.09 Aligned_cols=217 Identities=15% Similarity=0.141 Sum_probs=159.9
Q ss_pred eeeehhhhcccCCCCCceecccceeecCC---CCCcEEEEEecCCCCHHHHHh---CCCCCCCHHHHHHHHHHHHHHHHH
Q 004987 63 RKHSDGVELTHGDHLRNQGGLSGVCENEA---AIDPFVHAIEWGDVSLRQWLD---KPKRSVDVYECLHIFRQIVEIVYA 136 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~---~~~~~~lV~E~~g~sL~~~L~---~~~~~l~~~~~~~i~~QIl~aL~~ 136 (720)
+...+...+..++||||+++++.+...+. ....+++||||.+++|.+.+. .....+++..++.++.||+.||.|
T Consensus 65 ~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~ 144 (360)
T 3e3p_A 65 RELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGC 144 (360)
T ss_dssp HHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCEEEEEEEECCSCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCcccHHHhhhccccccccceeEEEEeecccccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHH
Confidence 33455666788899999999994443222 222378999996667776653 345568999999999999999999
Q ss_pred HH--HcCceeccCCCCcEEEcc-CCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccc
Q 004987 137 AH--SQGIVVHNVRPSCFVMSS-FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLV 213 (720)
Q Consensus 137 LH--s~gIvHrDLKP~NILl~~-~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla 213 (720)
|| ++||+||||||+|||++. ++.+||+|||++.......
T Consensus 145 lH~~~~~ivH~Dlkp~NIll~~~~~~~kl~Dfg~a~~~~~~~-------------------------------------- 186 (360)
T 3e3p_A 145 LHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSE-------------------------------------- 186 (360)
T ss_dssp HTSTTTCCBCSCCCGGGEEEETTTTEEEECCCTTCBCCCTTS--------------------------------------
T ss_pred HhCCCCCeecCcCCHHHEEEeCCCCcEEEeeCCCceecCCCC--------------------------------------
Confidence 99 999999999999999996 8999999888874332110
Q ss_pred cCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC-CCccc
Q 004987 214 TAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCAS 292 (720)
Q Consensus 214 ~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~-~s~~s 292 (720)
......||+.|+|||++.+.. ++.++
T Consensus 187 -----------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~ 213 (360)
T 3e3p_A 187 -----------------------------------------------------PNVAYICSRYYRAPELIFGNQHYTTAV 213 (360)
T ss_dssp -----------------------------------------------------CCCSTTSCGGGCCHHHHTTCSSCCTHH
T ss_pred -----------------------------------------------------CcccccCCcceeCHHHHcCCCCCCcHH
Confidence 001146899999999997765 89999
Q ss_pred cchhhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCc------------------------------cccccCchHHH
Q 004987 293 DIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPP------------------------------QLLLKFPKEAS 339 (720)
Q Consensus 293 DIwSLGvlL~eLlt---pf~~~~~~~~~~~~i~~~~~p~------------------------------~~~~~~p~~~~ 339 (720)
|||||||++|||++ ||............+.....++ ......+...+
T Consensus 214 Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (360)
T 3e3p_A 214 DIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYD 293 (360)
T ss_dssp HHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHH
Confidence 99999999999999 6766544433222222110110 00001234559
Q ss_pred HHHHcCCCCCCCCCChHHHHcCcccCCCccc
Q 004987 340 FCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 340 Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
||.+||++||.+|||+.|+|+||||+....+
T Consensus 294 li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~~ 324 (360)
T 3e3p_A 294 LLSALLQYLPEERMKPYEALCHPYFDELHDP 324 (360)
T ss_dssp HHHHHTCSSGGGSCCHHHHTTSGGGGGGGCT
T ss_pred HHHHHhccCccccCCHHHHhcCccccccCCc
Confidence 9999999999999999999999999987543
No 125
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=99.98 E-value=1e-32 Score=291.66 Aligned_cols=207 Identities=19% Similarity=0.244 Sum_probs=163.8
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004987 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~g 141 (720)
+..+|..++.+++||||+++++ ++.... .+|+|||| .|++|.+++.. ..+++..++.++.||+.||.|||++|
T Consensus 66 ~~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~ 139 (303)
T 3a7i_A 66 DIQQEITVLSQCDSPYVTKYYG-SYLKDT---KLWIIMEYLGGGSALDLLEP--GPLDETQIATILREILKGLDYLHSEK 139 (303)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EEEETT---EEEEEEECCTTEEHHHHHTT--SCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCEeEEEE-EEecCC---eEEEEEEeCCCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3447778899999999999999 554433 57999999 88899999954 34999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004987 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.++|+|||.+........
T Consensus 140 i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~--------------------------------------------- 174 (303)
T 3a7i_A 140 KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI--------------------------------------------- 174 (303)
T ss_dssp EECCCCSGGGEEECTTSCEEECCCTTCEECBTTBC---------------------------------------------
T ss_pred CccCCCChheEEECCCCCEEEeecccceecCcccc---------------------------------------------
Confidence 99999999999999999999998888733211100
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004987 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGvlL 301 (720)
......||+.|+|||++.+..++.++|||||||++
T Consensus 175 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 209 (303)
T 3a7i_A 175 ---------------------------------------------KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITA 209 (303)
T ss_dssp ---------------------------------------------CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHH
T ss_pred ---------------------------------------------ccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHH
Confidence 00114689999999999998899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004987 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~i~~~~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|+|++ ||...... .....+..... +.+....+ ...+|+.+||++||.+|||+.++|+||||...
T Consensus 210 ~~l~~g~~p~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~ 277 (303)
T 3a7i_A 210 IELARGEPPHSELHPM-KVLFLIPKNNP-PTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRN 277 (303)
T ss_dssp HHHHHSSCTTTTSCHH-HHHHHHHHSCC-CCCCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTCHHHHHH
T ss_pred HHHccCCCCCCCcCHH-HHHHHhhcCCC-CCCccccCHHHHHHHHHHcCCChhhCcCHHHHhhChhhhcC
Confidence 99999 55544333 22333333332 23333344 45599999999999999999999999999764
No 126
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=99.98 E-value=1.4e-33 Score=303.46 Aligned_cols=203 Identities=19% Similarity=0.223 Sum_probs=157.0
Q ss_pred hcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHHHc-Cceec
Q 004987 70 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHSQ-GIVVH 145 (720)
Q Consensus 70 ~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~~g~sL~~~L~~---~~~~l~~~~~~~i~~QIl~aL~~LHs~-gIvHr 145 (720)
.+..++||||+++++ ++.... .+|+||||.+++|.+++.. ....+++..++.++.||+.||.|||++ ||+||
T Consensus 103 ~~~~~~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~~ivH~ 178 (340)
T 3an0_A 103 SMRTVDCPFTVTFYG-ALFREG---DVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHR 178 (340)
T ss_dssp HHTTCCCTTTCCEEE-EEECSS---CEEEEECCCSEEHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHTCCCCC
T ss_pred HHhhcCCCcEEEEee-EEEeCC---cEEEEHHHhhCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecC
Confidence 377899999999999 554443 5799999966699998842 455699999999999999999999997 99999
Q ss_pred cCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccccc
Q 004987 146 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 225 (720)
Q Consensus 146 DLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~~~~~ 225 (720)
||||+|||++.++.+||+|||++......
T Consensus 179 Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~--------------------------------------------------- 207 (340)
T 3an0_A 179 DVKPSNVLINALGQVKMCDFGISGYLVDS--------------------------------------------------- 207 (340)
T ss_dssp SCCSTTEEECSTTCEEECCCSHHHHHSCH---------------------------------------------------
T ss_pred CCCHHHEEECCCCCEEEeeCCCceecccc---------------------------------------------------
Confidence 99999999999999999888876321100
Q ss_pred ccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC----CCCCccccchhhhhhh
Q 004987 226 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG----APVSCASDIYRLGVLL 301 (720)
Q Consensus 226 ~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~----~~~s~~sDIwSLGvlL 301 (720)
.......||+.|+|||++.+ ..++.++|||||||++
T Consensus 208 ----------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il 247 (340)
T 3an0_A 208 ----------------------------------------VAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITM 247 (340)
T ss_dssp ----------------------------------------HHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHH
T ss_pred ----------------------------------------cccccCCCCccccCccccccccccCCCCchhhHHHHHHHH
Confidence 00011368999999999754 3589999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004987 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~i~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|||++ ||.........+..+.....+......+ +...+||.+||+.||.+|||+.|+|+||||+..
T Consensus 248 ~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~ 317 (340)
T 3an0_A 248 IELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLH 317 (340)
T ss_dssp HHHHHTSCSSCCCSCHHHHHHHHHHSCCCCCCGGGSCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred HHHHHCCCCCccccchHHHHHHHhcCCCCCCCcccCCHHHHHHHHHHccCCcccCcCHHHHhcCcCcccc
Confidence 99999 6765433333333333333333322333 445699999999999999999999999999865
No 127
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=99.98 E-value=7e-33 Score=290.18 Aligned_cols=204 Identities=14% Similarity=0.188 Sum_probs=162.0
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004987 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~gI 142 (720)
..+|..++.+++||||+++++ ++.... .+|+|||| .+++|.+++...+ .+++..++.++.||+.||.|||++||
T Consensus 61 ~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i 135 (284)
T 2vgo_A 61 LRREIEIQSHLRHPNILRMYN-YFHDRK---RIYLMLEFAPRGELYKELQKHG-RFDEQRSATFMEELADALHYCHERKV 135 (284)
T ss_dssp HHHHHHHHHTCCCTTBCCEEE-EEECSS---EEEEEECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHTTTE
T ss_pred HHHHHHHHhcCCCCCEeeEEE-EEEcCC---EEEEEEEeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 346777899999999999999 555443 67999999 7889999995543 49999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004987 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.++|+|||.+......
T Consensus 136 ~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~------------------------------------------------ 167 (284)
T 2vgo_A 136 IHRDIKPENLLMGYKGELKIADFGWSVHAPSL------------------------------------------------ 167 (284)
T ss_dssp ECCCCSGGGEEECTTCCEEECCCTTCEECSSS------------------------------------------------
T ss_pred eecCCCHHHEEEcCCCCEEEecccccccCccc------------------------------------------------
Confidence 99999999999999999999988876321100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004987 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGvlL~ 302 (720)
......||+.|+|||++.+..++.++|||||||++|
T Consensus 168 --------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ 203 (284)
T 2vgo_A 168 --------------------------------------------RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCY 203 (284)
T ss_dssp --------------------------------------------CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHH
T ss_pred --------------------------------------------ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHH
Confidence 001136899999999999988999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004987 303 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~i~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
+|++ ||....... ....+..... .+.... +...+||.+||+.||.+||++.++++||||+..
T Consensus 204 ~l~~g~~pf~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h~~~~~~ 269 (284)
T 2vgo_A 204 EFLVGMPPFDSPSHTE-THRRIVNVDL--KFPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKAN 269 (284)
T ss_dssp HHHHSSCTTCCSSHHH-HHHHHHTTCC--CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTCHHHHHH
T ss_pred HHHHCCCCCCCCCHhH-HHHHHhcccc--CCCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhhCHHHHhh
Confidence 9999 666544432 2333332221 112223 444599999999999999999999999999865
No 128
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=99.98 E-value=3.8e-33 Score=296.84 Aligned_cols=202 Identities=17% Similarity=0.190 Sum_probs=153.6
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCC--CCCHHHHHHHHHHHHHHHHHHHHc
Q 004987 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKR--SVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~--~l~~~~~~~i~~QIl~aL~~LHs~ 140 (720)
..+|..+|.+++||||+++++ ++.... .+++|||| .|++|.+++..... .+++..++.++.||+.||.|||++
T Consensus 81 ~~~E~~~l~~l~hp~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~ 156 (309)
T 3p86_A 81 FLREVAIMKRLRHPNIVLFMG-AVTQPP---NLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR 156 (309)
T ss_dssp HHHHHHHHHHCCCTTBCCEEE-EECSTT---CCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHhCCCCCEeeEEE-EEEECC---ceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC
Confidence 347888999999999999999 555443 46999999 89999999965432 389999999999999999999999
Q ss_pred C--ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCC
Q 004987 141 G--IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 141 g--IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~ 218 (720)
| |+||||||+|||++.++.+||+|||++........
T Consensus 157 ~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~~------------------------------------------ 194 (309)
T 3p86_A 157 NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFL------------------------------------------ 194 (309)
T ss_dssp SSCCCCTTCCGGGEEECTTCCEEECCCC----------------------------------------------------
T ss_pred CCCEECCCCChhhEEEeCCCcEEECCCCCCcccccccc------------------------------------------
Confidence 9 99999999999999999999998888732111000
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhh
Q 004987 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
......||+.|+|||++.+..++.++||||||
T Consensus 195 ------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG 226 (309)
T 3p86_A 195 ------------------------------------------------SSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFG 226 (309)
T ss_dssp -------------------------------------------------------CCTTSCHHHHTTCCCCTTHHHHHHH
T ss_pred ------------------------------------------------ccccCCCCccccChhhhcCCCCCchhhHHHHH
Confidence 00114689999999999999999999999999
Q ss_pred hhhhhccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHc
Q 004987 299 VLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 299 vlL~eLlt---pf~~~~~~~~~~~~i~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|++|||++ ||....... ....+........+...+ +...+||.+||..||.+|||+.++++
T Consensus 227 ~il~elltg~~Pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~ 291 (309)
T 3p86_A 227 VILWELATLQQPWGNLNPAQ-VVAAVGFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMD 291 (309)
T ss_dssp HHHHHHHHCCCTTTTSCHHH-HHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHhCCCCCCCCCHHH-HHHHHHhcCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 99999999 676654443 233332222222223333 44569999999999999999999987
No 129
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=99.98 E-value=4.4e-33 Score=310.32 Aligned_cols=212 Identities=15% Similarity=0.177 Sum_probs=152.8
Q ss_pred eeehhhhcccC-CCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004987 64 KHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lV~E~~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~gI 142 (720)
..+|..+|.++ +|||||++++ ++.+.. .+|+||||.+++|.+++......+.+.+++.++.||+.||.|||++||
T Consensus 64 ~~~E~~~l~~l~~HpnIv~l~~-~~~~~~---~~~lv~E~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i 139 (432)
T 3p23_A 64 ADREVQLLRESDEHPNVIRYFC-TEKDRQ---FQYIAIELCAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNI 139 (432)
T ss_dssp CHHHHHHHHHSCCCTTBCCEEE-EEEETT---EEEEEEECCSEEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhccCCCCcCeEEE-EEecCC---EEEEEEECCCCCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHCcC
Confidence 44788889888 7999999999 555443 579999997789999997666557777788999999999999999999
Q ss_pred eeccCCCCcEEEccC-----CceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCC
Q 004987 143 VVHNVRPSCFVMSSF-----NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 143 vHrDLKP~NILl~~~-----~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~ 217 (720)
+||||||+|||++.+ ..++|+|||++........ .+
T Consensus 140 vHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~--------------------------------~~------- 180 (432)
T 3p23_A 140 VHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRH--------------------------------SF------- 180 (432)
T ss_dssp CCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC----------------------------------------------
T ss_pred EeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCc--------------------------------ce-------
Confidence 999999999999532 2467887777643211100 00
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC---CCCCccccc
Q 004987 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG---APVSCASDI 294 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~---~~~s~~sDI 294 (720)
.......||++|+|||++.+ ..++.++||
T Consensus 181 ------------------------------------------------~~~~~~~gt~~y~APE~l~~~~~~~~t~~~Di 212 (432)
T 3p23_A 181 ------------------------------------------------SRRSGVPGTEGWIAPEMLSEDCKENPTYTVDI 212 (432)
T ss_dssp -----------------------------------------------------CCSCTTSCCGGGTSCC---CCCTHHHH
T ss_pred ------------------------------------------------eeccccCCCcCccChhhhhcccccCCCcHHHH
Confidence 00012478999999999974 447889999
Q ss_pred hhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCcccc-c-cCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004987 295 YRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLL-L-KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 295 wSLGvlL~eLlt----pf~~~~~~~~~~~~i~~~~~p~~~~-~-~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|||||++|||++ ||...... .....+.....+.... . ..+...+||.+||+.||.+|||+.|+|+||||...
T Consensus 213 wSlG~il~ellt~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~hp~f~~~ 290 (432)
T 3p23_A 213 FSAGCVFYYVISEGSHPFGKSLQR-QANILLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFFWSL 290 (432)
T ss_dssp HHHHHHHHHHHTTSCBTTBSTTTH-HHHHHTTCCCCTTSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTSTTTCCH
T ss_pred HHHHHHHHHHHcCCCCCcchhhHH-HHHHHhccCCccccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHhCccccCh
Confidence 999999999998 45333222 1111222111111111 1 11224599999999999999999999999999875
No 130
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=99.98 E-value=8.1e-33 Score=291.61 Aligned_cols=216 Identities=15% Similarity=0.206 Sum_probs=154.8
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-------CCCCCCHHHHHHHHHHHHHHHH
Q 004987 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-------PKRSVDVYECLHIFRQIVEIVY 135 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~-------~~~~l~~~~~~~i~~QIl~aL~ 135 (720)
..+|..++.+++||||+++++ ++.... .+++|||| .|++|.+++.. ....+++..++.++.||+.||.
T Consensus 60 ~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~ 135 (303)
T 2vwi_A 60 LLKEIQAMSQCHHPNIVSYYT-SFVVKD---ELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLE 135 (303)
T ss_dssp ------CCCCCCCTTBCCEEE-EEESSS---CEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhcCCCCEeeEEE-EEeecC---CcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHH
Confidence 346777899999999999999 554443 57999999 79999999952 3445899999999999999999
Q ss_pred HHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccC
Q 004987 136 AAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 215 (720)
Q Consensus 136 ~LHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~ 215 (720)
|||++||+||||||+||+++.++.++|+|||.+....... ++.
T Consensus 136 ~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~---------------------------------~~~---- 178 (303)
T 2vwi_A 136 YLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGG---------------------------------DIT---- 178 (303)
T ss_dssp HHHHTTCCCCCCSGGGEEECTTCCEEECCCHHHHHCC-------------------------------------------
T ss_pred HHHhCCCCCCCCChhhEEEcCCCCEEEEeccchheeccCC---------------------------------Ccc----
Confidence 9999999999999999999999999999888774321110 000
Q ss_pred CCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-CCCCccccc
Q 004987 216 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDI 294 (720)
Q Consensus 216 ~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~~sDI 294 (720)
.........||+.|+|||++.+ ..++.++||
T Consensus 179 ------------------------------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di 210 (303)
T 2vwi_A 179 ------------------------------------------------RNKVRKTFVGTPCWMAPEVMEQVRGYDFKADI 210 (303)
T ss_dssp ---------------------------------------------------------CCCTTCCHHHHHHHHCCCTHHHH
T ss_pred ------------------------------------------------chhhhcccCCCccccCHHHhccccCCCchhhH
Confidence 0000011468999999999976 458999999
Q ss_pred hhhhhhhhhccc---cCCCCchHHHHHHHhhcCCC-------CccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcc
Q 004987 295 YRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVL-------PPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEF 363 (720)
Q Consensus 295 wSLGvlL~eLlt---pf~~~~~~~~~~~~i~~~~~-------p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~ 363 (720)
|||||++|||++ ||............+..... .+.....++ ...+|+.+||++||.+|||+.++++|||
T Consensus 211 ~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~ 290 (303)
T 2vwi_A 211 WSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKF 290 (303)
T ss_dssp HHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCCTTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTSTT
T ss_pred HHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCCccccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhChh
Confidence 999999999999 66655444333333332211 111122333 4459999999999999999999999999
Q ss_pred cCCCc
Q 004987 364 LNEPR 368 (720)
Q Consensus 364 ~~~~~ 368 (720)
|+...
T Consensus 291 ~~~~~ 295 (303)
T 2vwi_A 291 FQKAK 295 (303)
T ss_dssp C----
T ss_pred hhcCC
Confidence 98763
No 131
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=99.98 E-value=1.5e-32 Score=299.17 Aligned_cols=204 Identities=18% Similarity=0.206 Sum_probs=160.2
Q ss_pred ehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004987 66 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~gIv 143 (720)
+|..++.++ +||||+++++ ++.... ..|+|||| .|++|.+++... ..+++..++.++.||+.||.|||+.||+
T Consensus 148 ~E~~~l~~l~~hp~iv~~~~-~~~~~~---~~~lv~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~L~~LH~~gi~ 222 (365)
T 2y7j_A 148 RETHILRQVAGHPHIITLID-SYESSS---FMFLVFDLMRKGELFDYLTEK-VALSEKETRSIMRSLLEAVSFLHANNIV 222 (365)
T ss_dssp HHHHHHHHHTTCTTBCCEEE-EEEBSS---EEEEEECCCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHhcCCCCEeEEEE-EEeeCC---EEEEEEEeCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 677788887 8999999999 555443 67999999 889999999543 3499999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004987 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.++|+|||++.......
T Consensus 223 H~Dlkp~NIl~~~~~~ikl~DfG~~~~~~~~~------------------------------------------------ 254 (365)
T 2y7j_A 223 HRDLKPENILLDDNMQIRLSDFGFSCHLEPGE------------------------------------------------ 254 (365)
T ss_dssp CSCCSGGGEEECTTCCEEECCCTTCEECCTTC------------------------------------------------
T ss_pred cCCCCHHHEEECCCCCEEEEecCcccccCCCc------------------------------------------------
Confidence 99999999999999999999888773321100
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC------CCCCccccchhh
Q 004987 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG------APVSCASDIYRL 297 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~------~~~s~~sDIwSL 297 (720)
......||+.|+|||++.+ ..++.++|||||
T Consensus 255 -------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~sl 291 (365)
T 2y7j_A 255 -------------------------------------------KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWAC 291 (365)
T ss_dssp -------------------------------------------CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHH
T ss_pred -------------------------------------------ccccCCCCCCccChhhccccccccCcCCCchhhHHhH
Confidence 0011468999999999863 348899999999
Q ss_pred hhhhhhccc---cCCCCchHHHHHHHhhcCCCCc---cccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCC
Q 004987 298 GVLLFELFC---PFSTGEEKTRTMSSLRHRVLPP---QLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 366 (720)
Q Consensus 298 GvlL~eLlt---pf~~~~~~~~~~~~i~~~~~p~---~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~ 366 (720)
||++|+|++ ||...... .....+..+.... .+....+...+||.+||+.||.+|||+.|+|+||||+.
T Consensus 292 G~il~ell~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~f~r 365 (365)
T 2y7j_A 292 GVILFTLLAGSPPFWHRRQI-LMLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHPFFER 365 (365)
T ss_dssp HHHHHHHHHSSCSSCCSSHH-HHHHHHHHTCCCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCC
T ss_pred HHHHHHHHHCCCCCCCCCHH-HHHHHHHhCCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCcccCC
Confidence 999999999 66554433 3333343333221 22233445569999999999999999999999999973
No 132
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=99.98 E-value=1.3e-32 Score=293.79 Aligned_cols=213 Identities=15% Similarity=0.206 Sum_probs=158.9
Q ss_pred eehhhhcccC-CCCCceecccceeecCC--CCCcEEEEEec-CCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHH
Q 004987 65 HSDGVELTHG-DHLRNQGGLSGVCENEA--AIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 65 ~~e~~~L~~l-~HpnIV~l~~~~~~~~~--~~~~~~lV~E~-~g~sL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~~LHs 139 (720)
.+|..++.++ +||||+++++.+..... ....+|+|||| .+++|.+++... ...+++..++.++.||+.||.|||+
T Consensus 68 ~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~ 147 (326)
T 2x7f_A 68 KQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQ 147 (326)
T ss_dssp HHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccCCCCeeeeeeEEeeccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 3566678887 89999999994433221 13468999999 788999999543 3459999999999999999999999
Q ss_pred cCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004987 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||+||||||+|||++.++.++|+|||.+........
T Consensus 148 ~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~------------------------------------------- 184 (326)
T 2x7f_A 148 HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVG------------------------------------------- 184 (326)
T ss_dssp TTCCCCCCSGGGEEECTTCCEEECCCTTTC--------------------------------------------------
T ss_pred CCccccCCcHHHEEEcCCCCEEEeeCcCceecCcCcc-------------------------------------------
Confidence 9999999999999999999999998887733211000
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCcccc-----CCCCCccccc
Q 004987 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-----GAPVSCASDI 294 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~-----~~~~s~~sDI 294 (720)
......||+.|+|||++. +..++.++||
T Consensus 185 -----------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di 217 (326)
T 2x7f_A 185 -----------------------------------------------RRNTFIGTPYWMAPEVIACDENPDATYDFKSDL 217 (326)
T ss_dssp -----------------------------------------------------CCGGGCCHHHHC--------CCTTHHH
T ss_pred -----------------------------------------------ccccccCCccccChhhhccccccCcCCCccchH
Confidence 001136899999999997 4558999999
Q ss_pred hhhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004987 295 YRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 295 wSLGvlL~eLlt---pf~~~~~~~~~~~~i~~~~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
|||||++|+|++ ||......... ..+.....+......++ ...+||.+||..||.+||++.++|+||||+...
T Consensus 218 ~slG~il~~l~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~hp~~~~~~ 294 (326)
T 2x7f_A 218 WSLGITAIEMAEGAPPLCDMHPMRAL-FLIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMKHPFIRDQP 294 (326)
T ss_dssp HHHHHHHHHHHHSSCTTTTSCHHHHH-HHHHHSCCCCCSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTSHHHHCCT
T ss_pred HHHHHHHHHHHhCCCCCCCCcHHHHH-HHhhcCccccCCccccCHHHHHHHHHHhccChhhCCCHHHHhhChHHhhCc
Confidence 999999999999 66555443332 23333333333333444 445999999999999999999999999998763
No 133
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=99.98 E-value=9.8e-33 Score=292.14 Aligned_cols=207 Identities=16% Similarity=0.235 Sum_probs=163.7
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004987 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~gI 142 (720)
..+|..++.+++||||+++++ ++.... .+|+|||| .|++|.+++...+ .+++.+++.++.||+.||.|||++||
T Consensus 53 ~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i 127 (304)
T 2jam_A 53 LENEIAVLKKIKHENIVTLED-IYESTT---HYYLVMQLVSGGELFDRILERG-VYTEKDASLVIQQVLSAVKYLHENGI 127 (304)
T ss_dssp HHHHHHHHHHCCCTTBCCEEE-EEECSS---EEEEEECCCCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhCCCCCeeehhh-hcccCC---EEEEEEEcCCCccHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 346788999999999999999 555543 67999999 7899999995433 49999999999999999999999999
Q ss_pred eeccCCCCcEEE---ccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004987 143 VVHNVRPSCFVM---SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 143 vHrDLKP~NILl---~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||||||+||++ +.++.++|+|||.+......
T Consensus 128 ~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~--------------------------------------------- 162 (304)
T 2jam_A 128 VHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG--------------------------------------------- 162 (304)
T ss_dssp CCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCB---------------------------------------------
T ss_pred cccCCCHHHEEEecCCCCCCEEEccCCcceecCCC---------------------------------------------
Confidence 999999999999 67888999888876321100
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhh
Q 004987 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
......||+.|+|||++.+..++.++|||||||
T Consensus 163 -----------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ 195 (304)
T 2jam_A 163 -----------------------------------------------IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGV 195 (304)
T ss_dssp -----------------------------------------------TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHH
T ss_pred -----------------------------------------------ccccccCCCCccChHHhccCCCCchhhHHHHHH
Confidence 000136899999999999988999999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcCCC--CccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004987 300 LLFELFC---PFSTGEEKTRTMSSLRHRVL--PPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 300 lL~eLlt---pf~~~~~~~~~~~~i~~~~~--p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
++|+|++ ||...... .....+..+.. +....... +...+||.+||.+||.+|||+.|+|+||||....
T Consensus 196 il~~l~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~ 269 (304)
T 2jam_A 196 ITYILLCGYPPFYEETES-KLFEKIKEGYYEFESPFWDDISESAKDFICHLLEKDPNERYTCEKALSHPWIDGNT 269 (304)
T ss_dssp HHHHHHHSSCTTTTSCHH-HHHHHHHHCCCCCCTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHSSC
T ss_pred HHHHHHHCCCCCCCCCHH-HHHHHHHcCCCCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCccccCCC
Confidence 9999999 56554433 33444444322 22233333 4455999999999999999999999999998753
No 134
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=99.98 E-value=4.3e-33 Score=297.55 Aligned_cols=208 Identities=21% Similarity=0.242 Sum_probs=159.8
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004987 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~g 141 (720)
+..+|..+|.+++||||+++++ ++... .+|+|||| .+++|.+++... ..+++.+++.++.||+.||.|||++|
T Consensus 61 ~~~~E~~~l~~l~h~~i~~~~~-~~~~~----~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ 134 (322)
T 2ycf_A 61 NVETEIEILKKLNHPCIIKIKN-FFDAE----DYYIVLELMEGGELFDKVVGN-KRLKEATCKLYFYQMLLAVQYLHENG 134 (322)
T ss_dssp CHHHHHHHHHHCCCTTBCCEEE-EEESS----SEEEEEECCTTEETHHHHSTT-CCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHhCCCCCCceEee-EEcCC----ceEEEEecCCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 4457888999999999999999 55544 37999999 789999999543 45999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCc---eEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCC
Q 004987 142 IVVHNVRPSCFVMSSFNH---VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~---vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~ 218 (720)
|+||||||+|||++.++. +||+|||.+...+...
T Consensus 135 ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~------------------------------------------- 171 (322)
T 2ycf_A 135 IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS------------------------------------------- 171 (322)
T ss_dssp EECCCCSGGGEEESSSSSSCCEEECCCTTCEECCCCH-------------------------------------------
T ss_pred eeccCCCHHHEEEecCCCCCeEEEccCccceeccccc-------------------------------------------
Confidence 999999999999987664 9998888774321110
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCcccc---CCCCCccccch
Q 004987 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA---GAPVSCASDIY 295 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~---~~~~s~~sDIw 295 (720)
......||+.|+|||++. ...++.++|||
T Consensus 172 ------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~ 203 (322)
T 2ycf_A 172 ------------------------------------------------LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCW 203 (322)
T ss_dssp ------------------------------------------------HHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHH
T ss_pred ------------------------------------------------ccccccCCcCccCchhhccCCCCCCCchhhHH
Confidence 000136899999999974 45589999999
Q ss_pred hhhhhhhhccc---cCCCCchHHHHHHHhhcCC--CCcccccc-CchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004987 296 RLGVLLFELFC---PFSTGEEKTRTMSSLRHRV--LPPQLLLK-FPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 296 SLGvlL~eLlt---pf~~~~~~~~~~~~i~~~~--~p~~~~~~-~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
||||++|+|++ ||............+..+. +.+..... .+...+||.+||+.||.+||++.++|+||||...
T Consensus 204 slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h~~~~~~ 281 (322)
T 2ycf_A 204 SLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDE 281 (322)
T ss_dssp HHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGCCH
T ss_pred HHHHHHHHHHhCCCCCcccchHHHHHHHHHhCccccCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhhCcCcCCH
Confidence 99999999999 5654322212222233222 22333333 3445599999999999999999999999999864
No 135
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=99.98 E-value=9.3e-33 Score=290.24 Aligned_cols=211 Identities=19% Similarity=0.192 Sum_probs=159.1
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC--CCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004987 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP--KRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~--~~~l~~~~~~~i~~QIl~aL~~LHs~ 140 (720)
..+|..++..++||||+++++ ++.... .+++|||| .+++|.+++... ...+++..++.++.||+.||.|||++
T Consensus 66 ~~~e~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~ 141 (295)
T 2clq_A 66 LHEEIALHKHLKHKNIVQYLG-SFSENG---FIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN 141 (295)
T ss_dssp HHHHHHHHHTCCCTTBCCEEE-EEEETT---EEEEEEECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhCCCCCEeeEee-EEEeCC---cEEEEEEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhC
Confidence 336778999999999999999 554443 57999999 799999999543 23467999999999999999999999
Q ss_pred CceeccCCCCcEEEcc-CCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004987 141 GIVVHNVRPSCFVMSS-FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 141 gIvHrDLKP~NILl~~-~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
||+||||||+||+++. ++.++|+|||.+........
T Consensus 142 ~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~------------------------------------------- 178 (295)
T 2clq_A 142 QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP------------------------------------------- 178 (295)
T ss_dssp TEECCCCSGGGEEEETTTCCEEECCTTTCEESCC----------------------------------------------
T ss_pred CEEccCCChhhEEEECCCCCEEEeecccccccCCCCC-------------------------------------------
Confidence 9999999999999987 89999998887743211000
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC--CCccccchhh
Q 004987 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP--VSCASDIYRL 297 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~--~s~~sDIwSL 297 (720)
......||+.|+|||++.+.. ++.++|||||
T Consensus 179 -----------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~sl 211 (295)
T 2clq_A 179 -----------------------------------------------CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSL 211 (295)
T ss_dssp -------------------------------------------------CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHH
T ss_pred -----------------------------------------------cccccCCCccccChhhhcCCCCCCCcHHHHHHH
Confidence 001136899999999997654 7899999999
Q ss_pred hhhhhhccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004987 298 GVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 298 GvlL~eLlt---pf~~~~~~~~~~~~i~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
||++|+|++ ||.........+.........+.+.... +...+|+.+||++||.+||++.++|+||||+...
T Consensus 212 G~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~ 286 (295)
T 2clq_A 212 GCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKRACANDLLVDEFLKVSS 286 (295)
T ss_dssp HHHHHHHHHTSCTTGGGSSHHHHHHHHHHHCCCCCCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHTSGGGCC--
T ss_pred HHHHHHHHHCCCCccCCCchhHHHHhhccccccccccccCCHHHHHHHHHHccCChhhCCCHHHHhcChhhhhcc
Confidence 999999999 5543322222222221112222333333 4445999999999999999999999999999763
No 136
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=99.98 E-value=5e-33 Score=289.65 Aligned_cols=207 Identities=18% Similarity=0.258 Sum_probs=156.8
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004987 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~gI 142 (720)
..+|..++..++||||+++++ ++.... .+|+|||| .+++|.+++.... .+++.+++.++.||+.||.|||++||
T Consensus 58 ~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i 132 (276)
T 2h6d_A 58 IKREIQNLKLFRHPHIIKLYQ-VISTPT---DFFMVMEYVSGGELFDYICKHG-RVEEMEARRLFQQILSAVDYCHRHMV 132 (276)
T ss_dssp HHHHHHHHHTCCCTTBCCEEE-EEECSS---EEEEEEECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHhcCCCCCEeEEEE-EEecCC---eEEEEEeccCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHCCC
Confidence 346778899999999999999 554443 67999999 7899999995443 49999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004987 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+|+||||+||+++.++.++|+|||.+.......
T Consensus 133 ~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~----------------------------------------------- 165 (276)
T 2h6d_A 133 VHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE----------------------------------------------- 165 (276)
T ss_dssp SCCCCCGGGEEECTTSCEEECCCCGGGCCCC-------------------------------------------------
T ss_pred ccCCCChhhEEECCCCCEEEeecccccccCCCc-----------------------------------------------
Confidence 999999999999999999999888774321110
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCC-Cccccchhhhhhh
Q 004987 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYRLGVLL 301 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~-s~~sDIwSLGvlL 301 (720)
......||+.|+|||++.+..+ +.++|||||||++
T Consensus 166 --------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l 201 (276)
T 2h6d_A 166 --------------------------------------------FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVIL 201 (276)
T ss_dssp -------------------------------------------------------CCTGGGTTSCCCHHHHHHHHHHHHH
T ss_pred --------------------------------------------ceecccCCccccCHHHHcCCCCCCccchHHHHHHHH
Confidence 0001367999999999988765 6899999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004987 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~i~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
|+|++ ||...... .....+.....+. .....+...+|+.+||+.||.+|||+.|+++||||+...
T Consensus 202 ~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~-~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h~~~~~~~ 269 (276)
T 2h6d_A 202 YALLCGTLPFDDEHVP-TLFKKIRGGVFYI-PEYLNRSVATLLMHMLQVDPLKRATIKDIREHEWFKQDL 269 (276)
T ss_dssp HHHHHSSCSSCCSSHH-HHHHHHHHCCCCC-CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHTTC
T ss_pred HHHHhCCCCCCCCcHH-HHHHHhhcCcccC-chhcCHHHHHHHHHHccCChhhCCCHHHHHhChhhccCc
Confidence 99999 66554333 3344444432211 111234456999999999999999999999999998753
No 137
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=99.98 E-value=9.2e-33 Score=288.70 Aligned_cols=207 Identities=17% Similarity=0.259 Sum_probs=162.2
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004987 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~gI 142 (720)
..+|..++.+++||||+++++ ++.... .+++|||| .+++|.+++... ..+++.+++.++.||+.||.|||++||
T Consensus 55 ~~~E~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i 129 (283)
T 3bhy_A 55 IEREVNILREIRHPNIITLHD-IFENKT---DVVLILELVSGGELFDFLAEK-ESLTEDEATQFLKQILDGVHYLHSKRI 129 (283)
T ss_dssp HHHHHHHHHHCCCTTBCCEEE-EEECSS---EEEEEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHhCCCCCeeehhh-eecCCC---eEEEEEeecCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 347788999999999999999 555443 57999999 799999999543 349999999999999999999999999
Q ss_pred eeccCCCCcEEEccCC----ceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCC
Q 004987 143 VVHNVRPSCFVMSSFN----HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 143 vHrDLKP~NILl~~~~----~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~ 218 (720)
+||||||+||+++.++ .++|+|||.+.......
T Consensus 130 ~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~~~~~------------------------------------------- 166 (283)
T 3bhy_A 130 AHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGN------------------------------------------- 166 (283)
T ss_dssp ECSCCSGGGEEESCSSSSSCCEEECCCTTCEECC----------------------------------------------
T ss_pred cCCCCChHHEEEecCCCCCCceEEEecccceeccCCC-------------------------------------------
Confidence 9999999999998776 79998888763321100
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhh
Q 004987 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
......||+.|+|||++.+..++.++||||||
T Consensus 167 ------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG 198 (283)
T 3bhy_A 167 ------------------------------------------------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIG 198 (283)
T ss_dssp -----------------------------------------------------CCCGGGCCHHHHTTCCCCTHHHHHHHH
T ss_pred ------------------------------------------------cccccCCCcCccCcceecCCCCCcchhhhhHH
Confidence 00113689999999999988899999999999
Q ss_pred hhhhhccc---cCCCCchHHHHHHHhhcCC--CCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004987 299 VLLFELFC---PFSTGEEKTRTMSSLRHRV--LPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 299 vlL~eLlt---pf~~~~~~~~~~~~i~~~~--~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|++|+|++ ||...... .....+.... .++......+ ...+|+.+||++||.+|||+.++|+||||+..
T Consensus 199 ~il~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~ 272 (283)
T 3bhy_A 199 VITYILLSGASPFLGETKQ-ETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAI 272 (283)
T ss_dssp HHHHHHHHSSCTTCCSSHH-HHHHHHHTTCCCCCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHH
T ss_pred HHHHHHHHCCCCCCCcchH-HHHHHhHhcccCCcchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHH
Confidence 99999999 66655443 3333333222 2333333334 44599999999999999999999999999875
No 138
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=99.98 E-value=1.1e-32 Score=290.19 Aligned_cols=206 Identities=20% Similarity=0.240 Sum_probs=162.9
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004987 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~gIv 143 (720)
.+|..++..++||||+++++ ++.... .+++|||| .|++|.+++... ..+++.+++.++.||+.||.|||++||+
T Consensus 63 ~~e~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~i~ 137 (294)
T 2rku_A 63 SMEISIHRSLAHQHVVGFHG-FFEDND---FVFVVLELCRRRSLLELHKRR-KALTEPEARYYLRQIVLGCQYLHRNRVI 137 (294)
T ss_dssp HHHHHHHHTCCCTTBCCEEE-EEECSS---EEEEEEECCTTCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHhCCCCCEeeeee-eeccCC---EEEEEEecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 36788999999999999999 555443 57999999 889999998543 3499999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004987 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+||+++.++.++|+|||.+........
T Consensus 138 H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~----------------------------------------------- 170 (294)
T 2rku_A 138 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE----------------------------------------------- 170 (294)
T ss_dssp CCCCCGGGEEECTTCCEEECCCTTCEECCSTTC-----------------------------------------------
T ss_pred ccCCChHhEEEcCCCCEEEEeccCceecccCcc-----------------------------------------------
Confidence 999999999999999999998888743211100
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004987 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGvlL~e 303 (720)
......||+.|+|||++.+..++.++|||||||++|+
T Consensus 171 -------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ 207 (294)
T 2rku_A 171 -------------------------------------------RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYT 207 (294)
T ss_dssp -------------------------------------------CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHH
T ss_pred -------------------------------------------ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHH
Confidence 0011468999999999998889999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004987 304 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~i~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|++ ||...... .....+.....+ ......+...+|+.+||+.||.+|||+.|+++||||...
T Consensus 208 l~~g~~p~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~~~~~~~ 272 (294)
T 2rku_A 208 LLVGKPPFETSCLK-ETYLRIKKNEYS-IPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSG 272 (294)
T ss_dssp HHHSSCTTCCSSHH-HHHHHHHTTCCC-CCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHTS
T ss_pred HHhCCCCCCCCCHH-HHHHHHhhccCC-CccccCHHHHHHHHHHcccChhhCcCHHHHhhChheecC
Confidence 999 66554433 223333332221 111223445699999999999999999999999999865
No 139
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=99.98 E-value=8.5e-33 Score=297.30 Aligned_cols=207 Identities=20% Similarity=0.235 Sum_probs=163.4
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004987 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~gIv 143 (720)
.+|..++..++||||+++++ ++.+.. .+|+|||| .+++|.+++... ..+++.+++.++.||+.||.|||++||+
T Consensus 89 ~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~iv 163 (335)
T 2owb_A 89 SMEISIHRSLAHQHVVGFHG-FFEDND---FVFVVLELCRRRSLLELHKRR-KALTEPEARYYLRQIVLGCQYLHRNRVI 163 (335)
T ss_dssp HHHHHHHHTCCCTTBCCEEE-EEECSS---EEEEEECCCTTCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHhCCCCCCCeEEE-EEecCC---eEEEEEecCCCCCHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCCE
Confidence 36788999999999999999 555543 67999999 889999998543 3499999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004987 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.++|+|||.+........
T Consensus 164 H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~----------------------------------------------- 196 (335)
T 2owb_A 164 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE----------------------------------------------- 196 (335)
T ss_dssp CSCCCGGGEEECTTCCEEECCCTTCEECCSTTC-----------------------------------------------
T ss_pred ecCCCchhEEEcCCCCEEEeeccCceecccCcc-----------------------------------------------
Confidence 999999999999999999998888743211100
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004987 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGvlL~e 303 (720)
......||+.|+|||++.+..++.++|||||||++|+
T Consensus 197 -------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~ 233 (335)
T 2owb_A 197 -------------------------------------------RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYT 233 (335)
T ss_dssp -------------------------------------------CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHH
T ss_pred -------------------------------------------cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHH
Confidence 0011468999999999999889999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004987 304 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~i~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
|++ ||...... .....+....... .....+...+||.+||+.||.+|||+.|+|+||||....
T Consensus 234 l~~g~~pf~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~dp~~Rps~~ell~~~~~~~~~ 299 (335)
T 2owb_A 234 LLVGKPPFETSCLK-ETYLRIKKNEYSI-PKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGY 299 (335)
T ss_dssp HHHSSCTTCCSSHH-HHHHHHHHTCCCC-CTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHTSC
T ss_pred HHHCcCCCCCCCHH-HHHHHHhcCCCCC-CccCCHHHHHHHHHHccCChhHCcCHHHHhcCccccCCC
Confidence 999 66554433 2223333222111 112234456999999999999999999999999998763
No 140
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=99.98 E-value=4.7e-33 Score=290.31 Aligned_cols=213 Identities=17% Similarity=0.230 Sum_probs=164.7
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004987 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~---~~~~l~~~~~~~i~~QIl~aL~~LHs 139 (720)
..+|..++.+++||||+++++.+.... ...+|+|||| .|++|.+++.. ....+++..++.++.||+.||.|||+
T Consensus 52 ~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~ 129 (279)
T 2w5a_A 52 LVSEVNLLRELKHPNIVRYYDRIIDRT--NTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHR 129 (279)
T ss_dssp HHHHHHHHHHCCCTTBCCEEEEEEEGG--GTEEEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCCCeEEEEEecCC--CceEEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 347788999999999999999433222 2368999999 78899999943 23459999999999999999999999
Q ss_pred cC-----ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccccccccccc
Q 004987 140 QG-----IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVT 214 (720)
Q Consensus 140 ~g-----IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~ 214 (720)
+| |+||||||+|||++.++.++|+|||.+....... .
T Consensus 130 ~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~~~~~~---------------------------------~----- 171 (279)
T 2w5a_A 130 RSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDT---------------------------------S----- 171 (279)
T ss_dssp HC------CCCCCSGGGEEECSSSCEEECCCCHHHHC---C---------------------------------H-----
T ss_pred ccCCCCeeEEeccchhhEEEcCCCCEEEecCchheeecccc---------------------------------c-----
Confidence 99 9999999999999999999999888773321110 0
Q ss_pred CCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccc
Q 004987 215 APTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDI 294 (720)
Q Consensus 215 ~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDI 294 (720)
......||+.|+|||++.+..++.++||
T Consensus 172 ----------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di 199 (279)
T 2w5a_A 172 ----------------------------------------------------FAKTFVGTPYYMSPEQMNRMSYNEKSDI 199 (279)
T ss_dssp ----------------------------------------------------HHHHHHSCCTTCCHHHHHCC-CCHHHHH
T ss_pred ----------------------------------------------------cccccCCCccccChHHhccCCCCchhhH
Confidence 0001368999999999999889999999
Q ss_pred hhhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004987 295 YRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 295 wSLGvlL~eLlt---pf~~~~~~~~~~~~i~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
|||||++|+|++ ||...... .....+..+..++......+...+||.+||+.||.+||++.|+|+|+|+.+...
T Consensus 200 ~slG~il~~l~~g~~p~~~~~~~-~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~~~~ 276 (279)
T 2w5a_A 200 WSLGCLLYELCALMPPFTAFSQK-ELAGKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLILEHHH 276 (279)
T ss_dssp HHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCGGGS
T ss_pred HHHHHHHHHHHHCCCCCcccCHH-HHHHHHhhcccccCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhhhhcc
Confidence 999999999999 66655433 344445444443332233345569999999999999999999999999998643
No 141
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=99.98 E-value=1.2e-32 Score=285.16 Aligned_cols=201 Identities=16% Similarity=0.163 Sum_probs=157.0
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCC-CCCHHHHHHHHHHHHHHHHHHHHc
Q 004987 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKR-SVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~-~l~~~~~~~i~~QIl~aL~~LHs~ 140 (720)
+..+|..++.+++||||+++++ ++.... ...+++|||| .|++|.+++..... .+++.+++.++.||+.||.|||++
T Consensus 53 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~ 130 (271)
T 3kmu_A 53 DFNEECPRLRIFSHPNVLPVLG-ACQSPP-APHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTL 130 (271)
T ss_dssp HHHHHGGGGCCCSCTTEECEEE-EECTTT-SSSCEEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHhcCCCchhheEE-EEccCC-CCCeEeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC
Confidence 3447888999999999999999 554442 2367999999 88999999965433 589999999999999999999999
Q ss_pred C--ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCC
Q 004987 141 G--IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 141 g--IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~ 218 (720)
| |+||||||+|||++.++.++++||++.....
T Consensus 131 ~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~---------------------------------------------- 164 (271)
T 3kmu_A 131 EPLIPRHALNSRSVMIDEDMTARISMADVKFSFQ---------------------------------------------- 164 (271)
T ss_dssp SSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTS----------------------------------------------
T ss_pred CCceecCCCccceEEEcCCcceeEEeccceeeec----------------------------------------------
Confidence 9 9999999999999999999998765541100
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCc---cccch
Q 004987 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSC---ASDIY 295 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~---~sDIw 295 (720)
.....||+.|+|||++.+..++. ++|||
T Consensus 165 -------------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~ 195 (271)
T 3kmu_A 165 -------------------------------------------------SPGRMYAPAWVAPEALQKKPEDTNRRSADMW 195 (271)
T ss_dssp -------------------------------------------------CTTCBSCGGGSCHHHHHSCGGGSCHHHHHHH
T ss_pred -------------------------------------------------ccCccCCccccChhhhccCCCCCCCchhhHH
Confidence 00136799999999998876544 79999
Q ss_pred hhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004987 296 RLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 296 SLGvlL~eLlt---pf~~~~~~~~~~~~i~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
||||++|||++ ||..................++......+...+|+.+||+.||.+|||+.++++
T Consensus 196 slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 263 (271)
T 3kmu_A 196 SFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVP 263 (271)
T ss_dssp HHHHHHHHHHHCSCTTTTSCHHHHHHHHHHSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHHHhCCCCccccChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 99999999999 676655544434444333333332233344559999999999999999999986
No 142
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=99.98 E-value=3.5e-33 Score=305.92 Aligned_cols=252 Identities=15% Similarity=0.112 Sum_probs=159.6
Q ss_pred ehhhhcccCC--------CCCceecccceeecCCCCCcEEEEEecCCCCHHHHHh-CCCCCCCHHHHHHHHHHHHHHHHH
Q 004987 66 SDGVELTHGD--------HLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLD-KPKRSVDVYECLHIFRQIVEIVYA 136 (720)
Q Consensus 66 ~e~~~L~~l~--------HpnIV~l~~~~~~~~~~~~~~~lV~E~~g~sL~~~L~-~~~~~l~~~~~~~i~~QIl~aL~~ 136 (720)
+|..+|.++. ||||+++++.+...+.....+|+||||.+++|.+++. .....+++.+++.|+.||+.||.|
T Consensus 82 ~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~ 161 (397)
T 1wak_A 82 DEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDY 161 (397)
T ss_dssp HHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEETTEEEEEEEECCCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhcCCCCCCcceeeeeecceeecCCCCceEEEEEeccCccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHH
Confidence 5666777765 8889999995544443445789999998888888873 334569999999999999999999
Q ss_pred HHHc-CceeccCCCCcEEEccCCceEEeccCcccCCCCCC---cccccccccccccCC-CCCCchhhHhhhhcccccccc
Q 004987 137 AHSQ-GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDS---HEEGLNTQNMETKDL-SSPLPLDMLQRRTRLRREDLQ 211 (720)
Q Consensus 137 LHs~-gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~---~~~~~~~~~~~~~~~-~~~~~~d~~~~r~~~~l~Dfg 211 (720)
||++ ||+||||||+|||++.++.....+++......... ............... ..............++++|||
T Consensus 162 lH~~~givHrDikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG 241 (397)
T 1wak_A 162 LHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLG 241 (397)
T ss_dssp HHHTTCEECCCCSGGGEEECCCHHHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGG
T ss_pred HHHhCCEecCCCCHHHeeEeccchhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccc
Confidence 9998 99999999999999876532111111111000000 000000000000000 000001122233457788888
Q ss_pred cccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCcc
Q 004987 212 LVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCA 291 (720)
Q Consensus 212 la~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~ 291 (720)
++...... ....+||+.|+|||++.+..++.+
T Consensus 242 ~a~~~~~~------------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~ 273 (397)
T 1wak_A 242 NACWVHKH------------------------------------------------FTEDIQTRQYRSLEVLIGSGYNTP 273 (397)
T ss_dssp GCEETTBC------------------------------------------------SCSCCSCGGGCCHHHHHTSCCCTH
T ss_pred cccccccc------------------------------------------------CccCCCCCcccCChhhcCCCCCcH
Confidence 76532210 011478999999999999999999
Q ss_pred ccchhhhhhhhhccc---cCCCCc------hHH--HHHHHhhcCCCCccc------------------------------
Q 004987 292 SDIYRLGVLLFELFC---PFSTGE------EKT--RTMSSLRHRVLPPQL------------------------------ 330 (720)
Q Consensus 292 sDIwSLGvlL~eLlt---pf~~~~------~~~--~~~~~i~~~~~p~~~------------------------------ 330 (720)
+|||||||++|||++ ||.+.. ... ..+..+. +.+|..+
T Consensus 274 ~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (397)
T 1wak_A 274 ADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELL-GKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFE 352 (397)
T ss_dssp HHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHH-CSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHH
T ss_pred HHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhc-CCCChHHhhcccccccccCCccccccccccCCcchhH
Confidence 999999999999999 665432 111 1111111 1111110
Q ss_pred --------cc-cCchHHHHHHHcCCCCCCCCCChHHHHcCcccCC
Q 004987 331 --------LL-KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 366 (720)
Q Consensus 331 --------~~-~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~ 366 (720)
.. ..+...+||.+||++||.+|||+.|+|+||||+.
T Consensus 353 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~ 397 (397)
T 1wak_A 353 VLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLNS 397 (397)
T ss_dssp HHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTSGGGGC
T ss_pred hhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhCccccC
Confidence 00 0122349999999999999999999999999974
No 143
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=99.98 E-value=6e-33 Score=296.00 Aligned_cols=205 Identities=15% Similarity=0.172 Sum_probs=154.5
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC--CCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004987 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK--RSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~--~~l~~~~~~~i~~QIl~aL~~LHs~g 141 (720)
.+|..+|.+++||||+++++ ++.... ...+|+|||| .|++|.+++.... ..+++.+++.++.||+.||.|||++|
T Consensus 55 ~~E~~~l~~l~h~~iv~~~~-~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ 132 (319)
T 4euu_A 55 MREFEVLKKLNHKNIVKLFA-IEEETT-TRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG 132 (319)
T ss_dssp HHHHHHHHHCCCTTBCCEEE-EEECTT-TCCEEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhcCCCCcceEEE-EeecCC-CceEEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 37788999999999999999 544332 2367999999 7999999995432 33899999999999999999999999
Q ss_pred ceeccCCCCcEEE----ccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCC
Q 004987 142 IVVHNVRPSCFVM----SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 142 IvHrDLKP~NILl----~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~ 217 (720)
|+||||||+|||+ +..+.+||+|||++.......
T Consensus 133 ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~~~------------------------------------------ 170 (319)
T 4euu_A 133 IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE------------------------------------------ 170 (319)
T ss_dssp EECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCTTC------------------------------------------
T ss_pred EecCCCCHHHEEEeccCCCCceEEEccCCCceecCCCC------------------------------------------
Confidence 9999999999999 677789998888774321110
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCcccc--------CCCCC
Q 004987 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA--------GAPVS 289 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~--------~~~~s 289 (720)
......||+.|+|||++. +..++
T Consensus 171 -------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~ 201 (319)
T 4euu_A 171 -------------------------------------------------QFVSLYGTEEYLHPDMYERAVLRKDHQKKYG 201 (319)
T ss_dssp -------------------------------------------------CBCCCCSCGGGCCHHHHHHHTSCCCCCCCBC
T ss_pred -------------------------------------------------ceeecccCCCccCHHHhhhccccccccCCCC
Confidence 001146899999999986 56689
Q ss_pred ccccchhhhhhhhhccc---cCCCC---chHHHHHHHhhcCCCCc-----------------------cccccCc-hHHH
Q 004987 290 CASDIYRLGVLLFELFC---PFSTG---EEKTRTMSSLRHRVLPP-----------------------QLLLKFP-KEAS 339 (720)
Q Consensus 290 ~~sDIwSLGvlL~eLlt---pf~~~---~~~~~~~~~i~~~~~p~-----------------------~~~~~~p-~~~~ 339 (720)
.++|||||||++|||++ ||.+. ......+..+..+..+. .+....+ ...+
T Consensus 202 ~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 281 (319)
T 4euu_A 202 ATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTP 281 (319)
T ss_dssp TTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHH
Confidence 99999999999999999 55432 22223333333322211 0111112 2348
Q ss_pred HHHHcCCCCCCCCCChHHHHcCc
Q 004987 340 FCLWLLHPEPSGRPKMGELLQSE 362 (720)
Q Consensus 340 Li~~~L~~dP~~Rpta~eiL~hp 362 (720)
|+.+||+.||++|||++|+|+||
T Consensus 282 ll~~~L~~dP~~R~s~~ell~h~ 304 (319)
T 4euu_A 282 VLANILEADQEKCWGFDQFFAET 304 (319)
T ss_dssp HHHHHSCCCTTTSCCHHHHHHHH
T ss_pred HHHHhccCChhhhccHHHhhhcc
Confidence 99999999999999999999987
No 144
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=99.98 E-value=2.1e-34 Score=314.33 Aligned_cols=207 Identities=11% Similarity=0.092 Sum_probs=139.8
Q ss_pred hhhcccCCCCCceecccce------eecCCC--------------CCcEEEEEecCCCCHHHHHhCCCCCCCHHHH----
Q 004987 68 GVELTHGDHLRNQGGLSGV------CENEAA--------------IDPFVHAIEWGDVSLRQWLDKPKRSVDVYEC---- 123 (720)
Q Consensus 68 ~~~L~~l~HpnIV~l~~~~------~~~~~~--------------~~~~~lV~E~~g~sL~~~L~~~~~~l~~~~~---- 123 (720)
..+|.. +||||++++..+ +..... ...+|+||||.+++|.+++...+..+++...
T Consensus 116 ~~~l~~-~hp~iv~~~~~~~~p~d~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~ 194 (371)
T 3q60_A 116 AARLLG-ESPEEARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLDFVYVFRGDEGIL 194 (371)
T ss_dssp HHHHHC-----------CBCCCCEEEEETTSCSSSBCSCC---CCEEEEEEEECCCSEEHHHHHHHHHHSCCCCHHHHHH
T ss_pred HHHhcc-cChhhhhhceeEEeeehheecCCCCCeeeccCCcccceeeeEEEEecCCCCCHHHHHHHhccccchhhhhhhh
Confidence 456666 899988866322 211111 1347999999669999999654333555555
Q ss_pred --HHHHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhh
Q 004987 124 --LHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQR 201 (720)
Q Consensus 124 --~~i~~QIl~aL~~LHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 201 (720)
..++.||+.||.|||++||+||||||+|||++.++.+||+|||++...+..
T Consensus 195 vk~~i~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~--------------------------- 247 (371)
T 3q60_A 195 ALHILTAQLIRLAANLQSKGLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTR--------------------------- 247 (371)
T ss_dssp HHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEECTTSCEEECCGGGEEETTCE---------------------------
T ss_pred hHHHHHHHHHHHHHHHHHCCCccCcCCHHHEEECCCCCEEEEecceeeecCCC---------------------------
Confidence 677799999999999999999999999999999999999888877332110
Q ss_pred hhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCc
Q 004987 202 RTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPE 281 (720)
Q Consensus 202 r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE 281 (720)
.....||+.|+|||
T Consensus 248 ------------------------------------------------------------------~~~~~~t~~y~aPE 261 (371)
T 3q60_A 248 ------------------------------------------------------------------GPASSVPVTYAPRE 261 (371)
T ss_dssp ------------------------------------------------------------------EEGGGSCGGGCCHH
T ss_pred ------------------------------------------------------------------ccCccCCcCCcChh
Confidence 00135679999999
Q ss_pred cccC--CCCCccccchhhhhhhhhccc---cCCCCchHHH-HHHH---hh--c-CCCCccccccCchHHHHHHHcCCCCC
Q 004987 282 ELAG--APVSCASDIYRLGVLLFELFC---PFSTGEEKTR-TMSS---LR--H-RVLPPQLLLKFPKEASFCLWLLHPEP 349 (720)
Q Consensus 282 ~l~~--~~~s~~sDIwSLGvlL~eLlt---pf~~~~~~~~-~~~~---i~--~-~~~p~~~~~~~p~~~~Li~~~L~~dP 349 (720)
++.+ ..++.++|||||||++|||++ ||........ .+.. .. . ....+......+...+||.+||++||
T Consensus 262 ~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP 341 (371)
T 3q60_A 262 FLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDR 341 (371)
T ss_dssp HHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCTTCTTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSST
T ss_pred hccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCcccccchhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCCh
Confidence 9987 569999999999999999999 5654321100 0000 00 0 11111112233445599999999999
Q ss_pred CCCCChHHHHcCcccCCCc
Q 004987 350 SGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 350 ~~Rpta~eiL~hp~~~~~~ 368 (720)
++|||+.++|+||||+...
T Consensus 342 ~~Rpt~~e~l~hp~f~~~~ 360 (371)
T 3q60_A 342 RRRLLPLEAMETPEFLQLQ 360 (371)
T ss_dssp TTCCCHHHHTTSHHHHHHH
T ss_pred hhCCCHHHHhcCHHHHHHH
Confidence 9999999999999998763
No 145
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=99.97 E-value=1.5e-32 Score=293.90 Aligned_cols=206 Identities=15% Similarity=0.103 Sum_probs=159.5
Q ss_pred eeeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004987 62 LRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 62 ~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~ 140 (720)
.+..+|..++.+++||||+++++ ++... .+++|||| .+++|.+++......+++..++.++.||+.||.|||++
T Consensus 60 ~~~~~e~~~l~~l~h~~iv~~~~-~~~~~----~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~ 134 (325)
T 3kex_A 60 QAVTDHMLAIGSLDHAHIVRLLG-LCPGS----SLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEH 134 (325)
T ss_dssp CSCCHHHHHHHTCCCTTBCCEEE-EECBS----SEEEEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcCCCCCcCeEEE-EEcCC----ccEEEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhC
Confidence 34557888999999999999999 55433 47899999 89999999976655699999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004987 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+|||++.++.+||+|||++.........
T Consensus 135 ~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~------------------------------------------- 171 (325)
T 3kex_A 135 GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQ------------------------------------------- 171 (325)
T ss_dssp TCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCTTC-------------------------------------------
T ss_pred CCCCCccchheEEECCCCeEEECCCCcccccCccccc-------------------------------------------
Confidence 9999999999999999999999998887543221000
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhh
Q 004987 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
.......||+.|+|||++.+..++.++|||||||+
T Consensus 172 ---------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~ 206 (325)
T 3kex_A 172 ---------------------------------------------LLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVT 206 (325)
T ss_dssp ---------------------------------------------CC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHH
T ss_pred ---------------------------------------------ccccCCCCcccccChHHhccCCCChhhHhHHhHHH
Confidence 00011357889999999998889999999999999
Q ss_pred hhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004987 301 LFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 301 L~eLlt----pf~~~~~~~~~~~~i~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~h 361 (720)
+|||++ ||...... .....+.....++......+...+|+.+||..||.+||++.+++++
T Consensus 207 l~el~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~ 270 (325)
T 3kex_A 207 VWELMTFGAEPYAGLRLA-EVPDLLEKGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANE 270 (325)
T ss_dssp HHHHHTTSCCTTTTSCTT-HHHHHHHTTCBCCCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHH
T ss_pred HHHHHhCCCCCccccCHH-HHHHHHHcCCCCCCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 999998 55544332 2333333332222222334455699999999999999999999873
No 146
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=99.97 E-value=1.6e-32 Score=293.56 Aligned_cols=225 Identities=17% Similarity=0.216 Sum_probs=152.6
Q ss_pred ehhhhcccCCCCC------ceecccceeecCCCCCcEEEEEecCCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHH
Q 004987 66 SDGVELTHGDHLR------NQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 66 ~e~~~L~~l~Hpn------IV~l~~~~~~~~~~~~~~~lV~E~~g~sL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~~LH 138 (720)
+|..++..++|+| |+++++ ++.... .+|+||||.+++|.+++... ...+++.+++.++.||+.||.|||
T Consensus 60 ~e~~~l~~l~~~~~~~~~~i~~~~~-~~~~~~---~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH 135 (339)
T 1z57_A 60 SEIQVLEHLNTTDPNSTFRCVQMLE-WFEHHG---HICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLH 135 (339)
T ss_dssp HHHHHHHHHHHHCTTCTTCBCCEEE-EEEETT---EEEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhcCCCCceeeEeeec-ccccCC---cEEEEEcCCCCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHH
Confidence 5666777666654 899999 555443 68999999999999999543 345899999999999999999999
Q ss_pred HcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCC
Q 004987 139 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~ 218 (720)
++||+||||||+|||++..+.....+.+.... ........++++|||++.....
T Consensus 136 ~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~kl~Dfg~~~~~~~ 189 (339)
T 1z57_A 136 SNKLTHTDLKPENILFVQSDYTEAYNPKIKRD--------------------------ERTLINPDIKVVDFGSATYDDE 189 (339)
T ss_dssp HTTEECCCCCGGGEEESCCCEEEEEC----CE--------------------------EEEESCCCEEECCCSSCEETTS
T ss_pred HCCCcCCCCCHHHEEEeccccccccCCccccc--------------------------cccccCCCceEeeCcccccCcc
Confidence 99999999999999998743222111000000 0000001123344444321110
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhh
Q 004987 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
. .....||+.|+|||++.+..++.++||||||
T Consensus 190 ~------------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG 221 (339)
T 1z57_A 190 H------------------------------------------------HSTLVSTRHYRAPEVILALGWSQPCDVWSIG 221 (339)
T ss_dssp C------------------------------------------------CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHH
T ss_pred c------------------------------------------------cccccCCccccChHHhhCCCCCcchhhHHHH
Confidence 0 0114689999999999998899999999999
Q ss_pred hhhhhccc---cCCCCchHHH--HHHHhhcCCCCcccc-----------------------------------------c
Q 004987 299 VLLFELFC---PFSTGEEKTR--TMSSLRHRVLPPQLL-----------------------------------------L 332 (720)
Q Consensus 299 vlL~eLlt---pf~~~~~~~~--~~~~i~~~~~p~~~~-----------------------------------------~ 332 (720)
|++|||++ ||........ .+..+. +.+|+.+. .
T Consensus 222 ~il~el~~g~~pf~~~~~~~~~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (339)
T 1z57_A 222 CILIEYYLGFTVFPTHDSKEHLAMMERIL-GPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDV 300 (339)
T ss_dssp HHHHHHHHSSCSCCCSCHHHHHHHHHHHH-CSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSH
T ss_pred HHHHHHHhCCCCCCCCChHHHHHHHHHHh-CCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchh
Confidence 99999999 6655443321 111111 12222110 0
Q ss_pred cCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004987 333 KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 333 ~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
..+...+||.+||++||.+|||+.|+|+||||+....
T Consensus 301 ~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~ 337 (339)
T 1z57_A 301 EHERLFDLIQKMLEYDPAKRITLREALKHPFFDLLKK 337 (339)
T ss_dssp HHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGGGGC
T ss_pred hHHHHHHHHHHHhCcCcccccCHHHHhcCHHHHHHhc
Confidence 0123459999999999999999999999999987643
No 147
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=99.97 E-value=2.4e-32 Score=294.50 Aligned_cols=208 Identities=18% Similarity=0.222 Sum_probs=164.4
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHH------HhCC-CCCCCHHHHHHHHHHHHHHHHH
Q 004987 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQW------LDKP-KRSVDVYECLHIFRQIVEIVYA 136 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~------L~~~-~~~l~~~~~~~i~~QIl~aL~~ 136 (720)
.+|..++.+++||||+++++ ++.... .+|+|||| .|++|.++ +... ...+++..++.++.||+.||.|
T Consensus 91 ~~E~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~ 166 (348)
T 2pml_X 91 KNELQIITDIKNEYCLTCEG-IITNYD---EVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSY 166 (348)
T ss_dssp HHHHHHHTTCCCTTBCCCSE-EEESSS---EEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCcceEEE-EEeeCC---eEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHH
Confidence 37788999999999999999 555543 67999999 88899998 6332 4569999999999999999999
Q ss_pred HHH-cCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccC
Q 004987 137 AHS-QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 215 (720)
Q Consensus 137 LHs-~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~ 215 (720)
||+ +||+||||||+||+++.++.++|+|||.+......
T Consensus 167 lH~~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~----------------------------------------- 205 (348)
T 2pml_X 167 IHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDK----------------------------------------- 205 (348)
T ss_dssp HHHTSCEECCCCCGGGEEECTTSCEEECCCTTCEECBTT-----------------------------------------
T ss_pred HhccCCEeecCCChHhEEEcCCCcEEEeccccccccccc-----------------------------------------
Confidence 999 99999999999999999999999988877322100
Q ss_pred CCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-CCCc-ccc
Q 004987 216 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSC-ASD 293 (720)
Q Consensus 216 ~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~-~sD 293 (720)
......||+.|+|||++.+. .++. ++|
T Consensus 206 ---------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~D 234 (348)
T 2pml_X 206 ---------------------------------------------------KIKGSRGTYEFMPPEFFSNESSYNGAKVD 234 (348)
T ss_dssp ---------------------------------------------------EECSSCSCGGGCCGGGGSSCCCEEHHHHH
T ss_pred ---------------------------------------------------cccCCCCCcCccCchhhcCCCCCCcchhh
Confidence 00114689999999999887 5666 999
Q ss_pred chhhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCccc------------------cccCchHHHHHHHcCCCCCCCC
Q 004987 294 IYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQL------------------LLKFPKEASFCLWLLHPEPSGR 352 (720)
Q Consensus 294 IwSLGvlL~eLlt---pf~~~~~~~~~~~~i~~~~~p~~~------------------~~~~p~~~~Li~~~L~~dP~~R 352 (720)
||||||++|||++ ||............+.....+... ....+...+||.+||+.||.+|
T Consensus 235 i~slG~il~~l~~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R 314 (348)
T 2pml_X 235 IWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAER 314 (348)
T ss_dssp HHHHHHHHHHHHHSSCSSCCSSCSHHHHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGS
T ss_pred HHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhC
Confidence 9999999999999 676655434455555443222111 1223445599999999999999
Q ss_pred CChHHHHcCcccCCCc
Q 004987 353 PKMGELLQSEFLNEPR 368 (720)
Q Consensus 353 pta~eiL~hp~~~~~~ 368 (720)
||+.|+|+||||+...
T Consensus 315 ps~~e~l~hp~f~~~~ 330 (348)
T 2pml_X 315 ITSEDALKHEWLADTN 330 (348)
T ss_dssp CCHHHHHTSGGGTTCC
T ss_pred CCHHHHhcCccccCCC
Confidence 9999999999999863
No 148
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=99.97 E-value=1.1e-32 Score=297.77 Aligned_cols=225 Identities=17% Similarity=0.211 Sum_probs=163.1
Q ss_pred eeeehhhhcccCCCCCceecccceeecC--CCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004987 63 RKHSDGVELTHGDHLRNQGGLSGVCENE--AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~--~~~~~~~lV~E~~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~ 140 (720)
+..+|..++.+++||||+++++ ++... .....+|+||||.+++|.+++... .+++.+++.++.||+.||.|||++
T Consensus 55 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~L~~LH~~ 131 (353)
T 2b9h_A 55 RTLREIKILKHFKHENIITIFN-IQRPDSFENFNEVYIIQELMQTDLHRVISTQ--MLSDDHIQYFIYQTLRAVKVLHGS 131 (353)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-ECCCSCSTTCCCEEEEECCCSEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCcCCCcCCeee-eecccccCccceEEEEEeccCccHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHHC
Confidence 3447888999999999999999 44332 223468999999778999999653 499999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004987 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+|||++.++.+||+|||.+........... ...
T Consensus 132 ~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~----------------------------~~~---------- 173 (353)
T 2b9h_A 132 NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNS----------------------------EPT---------- 173 (353)
T ss_dssp TEECSCCCGGGEEECTTCCEEECCCTTCEECC------------------------------------------------
T ss_pred CeecCCCCHHHeEEcCCCcEEEEeccccccccccccccc----------------------------Ccc----------
Confidence 999999999999999999999999998854322110000 000
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-CCCCccccchhhhh
Q 004987 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGV 299 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~~sDIwSLGv 299 (720)
.........+||+.|+|||++.+ ..++.++|||||||
T Consensus 174 ------------------------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~ 211 (353)
T 2b9h_A 174 ------------------------------------------GQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGC 211 (353)
T ss_dssp ------------------------------------------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHH
T ss_pred ------------------------------------------ccccchhhccccccccCCeeeccCCCccchhhHHHHHH
Confidence 00000012478999999998865 56899999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhh--cCC-----------------------CCc----c-ccccCchHHHHHHHcCC
Q 004987 300 LLFELFC---PFSTGEEKTRTMSSLR--HRV-----------------------LPP----Q-LLLKFPKEASFCLWLLH 346 (720)
Q Consensus 300 lL~eLlt---pf~~~~~~~~~~~~i~--~~~-----------------------~p~----~-~~~~~p~~~~Li~~~L~ 346 (720)
++|+|++ ||.............. ... .+. . +....+...+||.+||+
T Consensus 212 il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~ 291 (353)
T 2b9h_A 212 ILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLV 291 (353)
T ss_dssp HHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSC
T ss_pred HHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcC
Confidence 9999999 6665543322211111 000 000 0 11223444599999999
Q ss_pred CCCCCCCChHHHHcCcccCCCccc
Q 004987 347 PEPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 347 ~dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
+||.+|||+.|+|+||||+....+
T Consensus 292 ~dP~~Rpt~~ell~hp~~~~~~~~ 315 (353)
T 2b9h_A 292 FDPAKRITAKEALEHPYLQTYHDP 315 (353)
T ss_dssp SSGGGSCCHHHHHTSGGGTTTCCT
T ss_pred cCcccCCCHHHHhcCccccccCCc
Confidence 999999999999999999986543
No 149
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=99.97 E-value=2.7e-32 Score=289.71 Aligned_cols=218 Identities=15% Similarity=0.145 Sum_probs=160.3
Q ss_pred eeehhhhcccCCCCCceecccceeecC-----------CCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHH
Q 004987 64 KHSDGVELTHGDHLRNQGGLSGVCENE-----------AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVE 132 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~-----------~~~~~~~lV~E~~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~ 132 (720)
..+|..++.+++||||+++++ ++... .....+|+||||.+++|.+++.+ ..+++..++.++.||+.
T Consensus 55 ~~~e~~~l~~l~h~~iv~~~~-~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~--~~~~~~~~~~~~~qi~~ 131 (320)
T 2i6l_A 55 ALREIKIIRRLDHDNIVKVFE-ILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQ--GPLLEEHARLFMYQLLR 131 (320)
T ss_dssp HHHHHHHHHTCCCTTBCCEEE-EECTTSCBCCC----CCSCSEEEEEEECCSEEHHHHHTT--CCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCeeEEEE-eccccccccccccccccccCceeEEeeccCCCHHHHhhc--CCccHHHHHHHHHHHHH
Confidence 347888999999999999999 44322 22346899999966799999954 34999999999999999
Q ss_pred HHHHHHHcCceeccCCCCcEEEc-cCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccc
Q 004987 133 IVYAAHSQGIVVHNVRPSCFVMS-SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQ 211 (720)
Q Consensus 133 aL~~LHs~gIvHrDLKP~NILl~-~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfg 211 (720)
||.|||++||+||||||+|||++ .++.+||+|||.+.........
T Consensus 132 ~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~---------------------------------- 177 (320)
T 2i6l_A 132 GLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSH---------------------------------- 177 (320)
T ss_dssp HHHHHHHTTCBCCCCSGGGEEEETTTTEEEECCCTTCBCC----------------------------------------
T ss_pred HHHHHHhCCEecCCCCHHHEEEcCCCCeEEEccCccccccCCCccc----------------------------------
Confidence 99999999999999999999997 5678999988887433111000
Q ss_pred cccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-CCCCc
Q 004987 212 LVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSC 290 (720)
Q Consensus 212 la~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~ 290 (720)
........||++|+|||++.+ ..++.
T Consensus 178 -----------------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~ 204 (320)
T 2i6l_A 178 -----------------------------------------------------KGHLSEGLVTKWYRSPRLLLSPNNYTK 204 (320)
T ss_dssp -------------------------------------------------------CCCGGGSCCTTCCHHHHHCTTCCCH
T ss_pred -----------------------------------------------------ccccccccccccccCcHHhcCcccCCc
Confidence 000011367999999999876 56899
Q ss_pred cccchhhhhhhhhccc---cCCCCchHHHHHHHhhcCCC-----------------------C----ccccc-cCchHHH
Q 004987 291 ASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVL-----------------------P----PQLLL-KFPKEAS 339 (720)
Q Consensus 291 ~sDIwSLGvlL~eLlt---pf~~~~~~~~~~~~i~~~~~-----------------------p----~~~~~-~~p~~~~ 339 (720)
++|||||||++|||++ ||............+..... + ..... ..+...+
T Consensus 205 ~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (320)
T 2i6l_A 205 AIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVD 284 (320)
T ss_dssp HHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHH
T ss_pred hhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHH
Confidence 9999999999999999 67665443222222111100 0 01112 2344559
Q ss_pred HHHHcCCCCCCCCCChHHHHcCcccCCCccch
Q 004987 340 FCLWLLHPEPSGRPKMGELLQSEFLNEPRDSM 371 (720)
Q Consensus 340 Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~l 371 (720)
||.+||+.||.+|||+.|+|+||||+....+.
T Consensus 285 li~~~L~~dP~~Rpt~~ell~hp~~~~~~~p~ 316 (320)
T 2i6l_A 285 FLEQILTFSPMDRLTAEEALSHPYMSIYSFPM 316 (320)
T ss_dssp HHHTTSCSSGGGSCCHHHHHTSHHHHTTCC--
T ss_pred HHHHHcCCCccccCCHHHHhCCcccccccCcc
Confidence 99999999999999999999999999765443
No 150
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=99.97 E-value=9.3e-33 Score=293.56 Aligned_cols=215 Identities=18% Similarity=0.269 Sum_probs=158.7
Q ss_pred eeehhhhcccCC--CCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004987 64 KHSDGVELTHGD--HLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 64 ~~~e~~~L~~l~--HpnIV~l~~~~~~~~~~~~~~~lV~E~~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~g 141 (720)
..+|..++.++. ||||+++++ ++.... .+|++||+.+++|.+++.... .+++.+++.++.||+.||.|||++|
T Consensus 73 ~~~E~~~l~~l~~~~~~iv~~~~-~~~~~~---~~~lv~e~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~ 147 (313)
T 3cek_A 73 YRNEIAYLNKLQQHSDKIIRLYD-YEITDQ---YIYMVMECGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQHG 147 (313)
T ss_dssp HHHHHHHHHHHGGGCTTBCCEEE-EEECSS---EEEEEECCCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhccccCCceEEEEE-EeecCC---EEEEEEecCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 346777888887 599999999 554443 589999999999999996543 5999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004987 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++ ++.+||+|||.+.........
T Consensus 148 ivH~dlkp~NIl~~-~~~~kL~Dfg~~~~~~~~~~~-------------------------------------------- 182 (313)
T 3cek_A 148 IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS-------------------------------------------- 182 (313)
T ss_dssp CCCCCCCGGGEEEE-TTEEEECCCSSSCC---------------------------------------------------
T ss_pred ceecCCCcccEEEE-CCeEEEeeccccccccCcccc--------------------------------------------
Confidence 99999999999996 589999988887433211000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-----------CCCCc
Q 004987 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-----------APVSC 290 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-----------~~~s~ 290 (720)
.......||+.|+|||++.+ ..++.
T Consensus 183 --------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~ 218 (313)
T 3cek_A 183 --------------------------------------------VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISP 218 (313)
T ss_dssp ---------------------------------------------------CCGGGCCHHHHTTCC----------CCCH
T ss_pred --------------------------------------------ccccCCCCCCCcCCHHHHhhcccccccccccccCCc
Confidence 00011468999999999976 35889
Q ss_pred cccchhhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCC
Q 004987 291 ASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNE 366 (720)
Q Consensus 291 ~sDIwSLGvlL~eLlt---pf~~~~~~~~~~~~i~~~~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~ 366 (720)
++|||||||++|||++ ||.........+..+........+....+ ...+|+.+||+.||.+||++.|+|+||||+.
T Consensus 219 ~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~~~~ 298 (313)
T 3cek_A 219 KSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQI 298 (313)
T ss_dssp HHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHC
T ss_pred hHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHhcccccCCcccchHHHHHHHHHHccCCcccCcCHHHHhcCccccC
Confidence 9999999999999999 66554333333333333333333333333 4559999999999999999999999999998
Q ss_pred CccchH
Q 004987 367 PRDSME 372 (720)
Q Consensus 367 ~~~~l~ 372 (720)
...+..
T Consensus 299 ~~~~~~ 304 (313)
T 3cek_A 299 QTHPVN 304 (313)
T ss_dssp C-----
T ss_pred CCCchh
Confidence 754433
No 151
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=99.97 E-value=2.1e-33 Score=298.15 Aligned_cols=215 Identities=14% Similarity=0.157 Sum_probs=156.2
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004987 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~g 141 (720)
+..+|..++.+++||||+++++ ++.++. .+++|||| .|++|.+++......+++.+++.++.||+.||.|||++|
T Consensus 53 ~~~~E~~~l~~l~hp~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ 128 (310)
T 3s95_A 53 TFLKEVKVMRCLEHPNVLKFIG-VLYKDK---RLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMN 128 (310)
T ss_dssp HHHHHHHHHTTCCCTTBCCEEE-EEEETT---EEEEEEECCTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCcCcccEEE-EEecCC---eeEEEEEecCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3447888999999999999999 554443 57999999 899999999765666999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004987 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||.+........... +....
T Consensus 129 ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~-------------------------------~~~~~------ 171 (310)
T 3s95_A 129 IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPE-------------------------------GLRSL------ 171 (310)
T ss_dssp EECSCCSTTSEEECTTSCEEECCCTTCEECC-------------------------------------------------
T ss_pred ccCCCCCcCeEEECCCCCEEEeecccceeccccccccc-------------------------------ccccc------
Confidence 99999999999999999999999998854432210000 00000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004987 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGvlL 301 (720)
............||+.|+|||++.+..++.++|||||||++
T Consensus 172 ---------------------------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l 212 (310)
T 3s95_A 172 ---------------------------------------KKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVL 212 (310)
T ss_dssp -----------------------------------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHH
T ss_pred ---------------------------------------cccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHH
Confidence 00000001125799999999999999999999999999999
Q ss_pred hhccc---cCCCCchHH----HHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004987 302 FELFC---PFSTGEEKT----RTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~----~~~~~i~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||....... ...........++. ..+...+|+.+||+.||.+|||+.++++
T Consensus 213 ~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~li~~~l~~dP~~Rps~~~l~~ 275 (310)
T 3s95_A 213 CEIIGRVNADPDYLPRTMDFGLNVRGFLDRYCPPN---CPPSFFPITVRCCDLDPEKRPSFVKLEH 275 (310)
T ss_dssp HHHHHTCCSSTTTSCBCTTSSBCHHHHHHHTCCTT---CCTTHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHhcCCCCCcchhhhHHHHhhhhhccccccCCCC---CCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 99998 333211100 00001111111221 2244569999999999999999999986
No 152
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=99.97 E-value=1.4e-32 Score=298.24 Aligned_cols=208 Identities=18% Similarity=0.213 Sum_probs=158.5
Q ss_pred eehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004987 65 HSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~gI 142 (720)
.+|..+|.++ .||||+++++ ++.... .+|+|||| .+++|.+++.... .+++.+++.++.||+.||.|||++||
T Consensus 106 ~~E~~~l~~l~~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~i 180 (355)
T 1vzo_A 106 RTERQVLEHIRQSPFLVTLHY-AFQTET---KLHLILDYINGGELFTHLSQRE-RFTEHEVQIYVGEIVLALEHLHKLGI 180 (355)
T ss_dssp CCHHHHHHHHHTCTTBCCEEE-EEEETT---EEEEEECCCCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHccCCCceeEEEE-EEeeCc---eEEEEeecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 3677788888 6999999999 554443 57999999 8899999995543 49999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004987 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.+||+|||+++.+.....
T Consensus 181 vH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~---------------------------------------------- 214 (355)
T 1vzo_A 181 IYRDIKLENILLDSNGHVVLTDFGLSKEFVADET---------------------------------------------- 214 (355)
T ss_dssp CCCCCCGGGEEECTTSCEEESCSSEEEECCGGGG----------------------------------------------
T ss_pred ccCCCCHHHEEECCCCcEEEeeCCCCeecccCCC----------------------------------------------
Confidence 9999999999999999999998888743211000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC--CCCccccchhhhhh
Q 004987 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA--PVSCASDIYRLGVL 300 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~--~~s~~sDIwSLGvl 300 (720)
......+||+.|+|||++.+. .++.++|||||||+
T Consensus 215 -------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~i 251 (355)
T 1vzo_A 215 -------------------------------------------ERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVL 251 (355)
T ss_dssp -------------------------------------------GGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHH
T ss_pred -------------------------------------------CcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHH
Confidence 000114789999999999864 37899999999999
Q ss_pred hhhccc---cCCCCc---hHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC
Q 004987 301 LFELFC---PFSTGE---EKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 367 (720)
Q Consensus 301 L~eLlt---pf~~~~---~~~~~~~~i~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~ 367 (720)
+|||++ ||.... ........+... .++......+...+||.+||.+||.+|| ++.|+++||||...
T Consensus 252 l~ell~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f~~~ 328 (355)
T 1vzo_A 252 MYELLTGASPFTVDGEKNSQAEISRRILKS-EPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKI 328 (355)
T ss_dssp HHHHHHSSCTTSCTTSCCCHHHHHHHHHHC-CCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTC
T ss_pred HHHHHHCCCCCccCCccchHHHHHHHHhcc-CCCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcchhcC
Confidence 999999 664321 122222222222 1121122234455999999999999999 99999999999976
No 153
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=99.97 E-value=2.9e-32 Score=297.55 Aligned_cols=204 Identities=16% Similarity=0.169 Sum_probs=158.9
Q ss_pred eeehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC---------------CCCCHHHHHHH
Q 004987 64 KHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---------------RSVDVYECLHI 126 (720)
Q Consensus 64 ~~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~---------------~~l~~~~~~~i 126 (720)
..+|..+|.++ +|||||++++ ++.... .+|+|||| .|++|.+++.... ..+++.+++.+
T Consensus 133 ~~~E~~~l~~l~~hpnIv~~~~-~~~~~~---~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 208 (370)
T 2psq_A 133 LVSEMEMMKMIGKHKNIINLLG-ACTQDG---PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 208 (370)
T ss_dssp HHHHHHHHHHSCCCTTBCCEEE-EECSSS---SCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCEeeEEE-EEccCC---CEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHH
Confidence 34778889999 8999999999 555443 57999999 8999999995432 34899999999
Q ss_pred HHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccc
Q 004987 127 FRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLR 206 (720)
Q Consensus 127 ~~QIl~aL~~LHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~ 206 (720)
+.||+.||.|||++||+||||||+|||++.++.+||+|||++.........
T Consensus 209 ~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~----------------------------- 259 (370)
T 2psq_A 209 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYY----------------------------- 259 (370)
T ss_dssp HHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCSSCEETTCCCTT-----------------------------
T ss_pred HHHHHHHHHHHHhCCeeccccchhhEEECCCCCEEEccccCCcccCcccce-----------------------------
Confidence 999999999999999999999999999999999999999887433211000
Q ss_pred ccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC
Q 004987 207 REDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA 286 (720)
Q Consensus 207 l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~ 286 (720)
.......||+.|+|||++.+.
T Consensus 260 -----------------------------------------------------------~~~~~~~~t~~y~aPE~~~~~ 280 (370)
T 2psq_A 260 -----------------------------------------------------------KKTTNGRLPVKWMAPEALFDR 280 (370)
T ss_dssp -----------------------------------------------------------CTTTTTTSCGGGCCHHHHHTC
T ss_pred -----------------------------------------------------------ecccCCCcccceECHhHhcCC
Confidence 000113568899999999999
Q ss_pred CCCccccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004987 287 PVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 287 ~~s~~sDIwSLGvlL~eLlt----pf~~~~~~~~~~~~i~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
.++.++|||||||++|||++ ||...... .....+..+..++......+...+||.+||+.||.+||++.|+++
T Consensus 281 ~~~~~~DvwslG~il~ellt~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~ 357 (370)
T 2psq_A 281 VYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE-ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 357 (370)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG-GHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHH-HHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 99999999999999999998 55544332 334444444333333333445569999999999999999999986
No 154
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=99.97 E-value=3.8e-32 Score=286.23 Aligned_cols=207 Identities=16% Similarity=0.190 Sum_probs=161.5
Q ss_pred eehhhhcccCC-CCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004987 65 HSDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~L~~l~-HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~gI 142 (720)
.+|..++.++. ||||+++++ ++.... .+++|||| .+++|.+++... ..+++.+++.++.||+.||.|||++||
T Consensus 71 ~~e~~~l~~l~~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i 145 (298)
T 1phk_A 71 LKEVDILRKVSGHPNIIQLKD-TYETNT---FFFLVFDLMKKGELFDYLTEK-VTLSEKETRKIMRALLEVICALHKLNI 145 (298)
T ss_dssp HHHHHHHHHHTTCTTBCCEEE-EEECSS---EEEEEEECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHhcCCCCEeeeee-eeccCC---eEEEEEeccCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 36777888885 999999999 555443 67999999 789999999543 349999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004987 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.++|+|||.+.......
T Consensus 146 ~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~----------------------------------------------- 178 (298)
T 1phk_A 146 VHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE----------------------------------------------- 178 (298)
T ss_dssp ECSCCSGGGEEECTTCCEEECCCTTCEECCTTC-----------------------------------------------
T ss_pred ccCCCCcceEEEcCCCcEEEecccchhhcCCCc-----------------------------------------------
Confidence 999999999999999999999888773321110
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCcccc------CCCCCccccchh
Q 004987 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA------GAPVSCASDIYR 296 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~------~~~~s~~sDIwS 296 (720)
......||+.|+|||++. ...++.++||||
T Consensus 179 --------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~s 214 (298)
T 1phk_A 179 --------------------------------------------KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWS 214 (298)
T ss_dssp --------------------------------------------CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHH
T ss_pred --------------------------------------------ccccccCCccccCHHHhccccccccccCCcccccHh
Confidence 001136799999999985 445899999999
Q ss_pred hhhhhhhccc---cCCCCchHHHHHHHhhcCCC--C-ccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004987 297 LGVLLFELFC---PFSTGEEKTRTMSSLRHRVL--P-PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 297 LGvlL~eLlt---pf~~~~~~~~~~~~i~~~~~--p-~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
|||++|+|++ ||...... .....+..... + +......+...+|+.+||+.||.+|||+.|+|+||||++..
T Consensus 215 lG~~l~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~ 291 (298)
T 1phk_A 215 TGVIMYTLLAGSPPFWHRKQM-LMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQYV 291 (298)
T ss_dssp HHHHHHHHHHSSCSSCCSSHH-HHHHHHHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCTTC
T ss_pred HHHHHHHHHHCCCCCcCccHH-HHHHHHhcCCcccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHhChHhhhcc
Confidence 9999999999 66554433 23333333222 2 22223334456999999999999999999999999999763
No 155
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=99.97 E-value=2.7e-32 Score=292.33 Aligned_cols=205 Identities=15% Similarity=0.148 Sum_probs=160.3
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004987 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~gI 142 (720)
..+|..+|.+++||||+++++ ++.++. .+|+|||| .|++|.+++......+++.+++.++.||+.||.|||++||
T Consensus 97 ~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~i 172 (325)
T 3kul_A 97 FLSEASIMGQFDHPNIIRLEG-VVTRGR---LAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGY 172 (325)
T ss_dssp HHHHHHHHTTCCCTTBCCEEE-EECGGG---CCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHhCCCCCCCcEEE-EEEeCC---ccEEEeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 347888999999999999999 565543 46999999 7999999997666679999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004987 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.++|+|||++......... .+
T Consensus 173 vH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~-------------------------------~~------------ 209 (325)
T 3kul_A 173 VHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDA-------------------------------AY------------ 209 (325)
T ss_dssp ECSCCSGGGEEECTTCCEEECCCSSCEECC----C-------------------------------CE------------
T ss_pred eCCCCCcceEEECCCCCEEECCCCcccccccCccc-------------------------------ee------------
Confidence 99999999999999999999999887443211000 00
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004987 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGvlL~ 302 (720)
......+|+.|+|||++.+..++.++|||||||++|
T Consensus 210 --------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ 245 (325)
T 3kul_A 210 --------------------------------------------TTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMW 245 (325)
T ss_dssp --------------------------------------------ECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHH
T ss_pred --------------------------------------------eccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHH
Confidence 000134688999999999888999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004987 303 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~i~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
||++ ||...... .....+..+..++......+...+|+.+||+.||.+|||+.+|++
T Consensus 246 ell~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~ 306 (325)
T 3kul_A 246 EVLAYGERPYWNMTNR-DVISSVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVS 306 (325)
T ss_dssp HHHTTSCCTTTTSCHH-HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHcCCCCCcccCCHH-HHHHHHHcCCCCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 9997 56554443 344444444333333333445569999999999999999999986
No 156
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.97 E-value=2.2e-32 Score=284.00 Aligned_cols=204 Identities=15% Similarity=0.171 Sum_probs=161.0
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004987 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~gI 142 (720)
..+|..++.+++||||+++++ ++.+.. .+++|||| .+++|.+++......+++..++.++.||+.||.|||++||
T Consensus 52 ~~~E~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i 127 (269)
T 4hcu_A 52 FIEEAEVMMKLSHPKLVQLYG-VCLEQA---PICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACV 127 (269)
T ss_dssp HHHHHHHHHTCCCTTBCCEEE-EECSSS---SEEEEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhCCCCCEeeEEE-EEecCC---ceEEEEEeCCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 346788999999999999999 555443 57999999 8999999997666679999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004987 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.++|+|||.+........
T Consensus 128 ~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~---------------------------------------------- 161 (269)
T 4hcu_A 128 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY---------------------------------------------- 161 (269)
T ss_dssp CCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHH----------------------------------------------
T ss_pred ecCCcchheEEEcCCCCEEecccccccccccccc----------------------------------------------
Confidence 9999999999999999999998888743211100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004987 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGvlL~ 302 (720)
. ......||+.|+|||++.+..++.++|||||||++|
T Consensus 162 ------------------------~-------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ 198 (269)
T 4hcu_A 162 ------------------------T-------------------SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMW 198 (269)
T ss_dssp ------------------------H-------------------STTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred ------------------------c-------------------cccCcccccccCCHHHhcCCCCCchhhhHHHHHHHH
Confidence 0 000135688899999999888999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004987 303 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~i~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~h 361 (720)
+|++ ||...... .....+.....+.......+...+|+.+||+.||.+|||+.+++++
T Consensus 199 ~ll~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 260 (269)
T 4hcu_A 199 EVFSEGKIPYENRSNS-EVVEDISTGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQ 260 (269)
T ss_dssp HHHTTSCCTTTTCCHH-HHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHhcCCCCCCCCCCHH-HHHHHHhcCccCCCCCcCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence 9998 55554433 4444454443333222334555699999999999999999999973
No 157
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=99.97 E-value=1.7e-32 Score=287.00 Aligned_cols=203 Identities=18% Similarity=0.169 Sum_probs=152.4
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004987 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~g 141 (720)
+..+|..++.+++||||+++++ ++..+ .+|+|||| .+++|.+++......+++..++.++.||+.||.|||++|
T Consensus 62 ~~~~e~~~l~~l~h~~iv~~~~-~~~~~----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ 136 (281)
T 1mp8_A 62 KFLQEALTMRQFDHPHIVKLIG-VITEN----PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR 136 (281)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEE-EECSS----SCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCccceEEE-EEccC----ccEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3447888999999999999999 55332 46899999 889999999666556999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004987 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||++.........
T Consensus 137 i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-------------------------------------------- 172 (281)
T 1mp8_A 137 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY-------------------------------------------- 172 (281)
T ss_dssp CCCSCCSGGGEEEEETTEEEECC---------------------------------------------------------
T ss_pred eecccccHHHEEECCCCCEEECccccccccCccccc--------------------------------------------
Confidence 999999999999999999999988887432111000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004987 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGvlL 301 (720)
......+|+.|+|||++.+..++.++|||||||++
T Consensus 173 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l 207 (281)
T 1mp8_A 173 ---------------------------------------------KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCM 207 (281)
T ss_dssp ---------------------------------------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHH
T ss_pred ---------------------------------------------ccccCCCcccccChhhcccCCCCCccCchHHHHHH
Confidence 00012467899999999988899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004987 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~i~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||...... .....+.....++......+...+|+.+||+.||.+|||+.++++
T Consensus 208 ~ell~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~ 269 (281)
T 1mp8_A 208 WEILMHGVKPFQGVKNN-DVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKA 269 (281)
T ss_dssp HHHHTTSCCTTTTCCGG-GHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHhcCCCCCCcCCHH-HHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 99996 66554433 233344443333332333345569999999999999999999985
No 158
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=99.97 E-value=1.1e-32 Score=294.63 Aligned_cols=209 Identities=14% Similarity=0.085 Sum_probs=156.6
Q ss_pred eeeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004987 62 LRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 62 ~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~ 140 (720)
.+.++|..+|.+++|||||++++.+.........+|+|||| .+++|.+++... .+++.+++.++.||+.||.|||+.
T Consensus 63 ~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~qi~~al~~LH~~ 140 (322)
T 3soc_A 63 WQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKAN--VVSWNELCHIAETMARGLAYLHED 140 (322)
T ss_dssp HHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEEecCCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHhh
Confidence 34556888899999999999999444434334468999999 889999999653 399999999999999999999999
Q ss_pred ----------CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccccccc
Q 004987 141 ----------GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDL 210 (720)
Q Consensus 141 ----------gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Df 210 (720)
||+||||||+|||++.++.+||+|||++.........
T Consensus 141 ~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a~~~~~~~~~--------------------------------- 187 (322)
T 3soc_A 141 IPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSA--------------------------------- 187 (322)
T ss_dssp EEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTCEEECTTSCC---------------------------------
T ss_pred ccccccccCCCEEeCCCChHhEEECCCCeEEEccCCcccccccccCc---------------------------------
Confidence 9999999999999999999999988887432211000
Q ss_pred ccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC----
Q 004987 211 QLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA---- 286 (720)
Q Consensus 211 gla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~---- 286 (720)
.......||+.|+|||++.+.
T Consensus 188 -------------------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~ 212 (322)
T 3soc_A 188 -------------------------------------------------------GDTHGQVGTRRYMAPEVLEGAINFQ 212 (322)
T ss_dssp -------------------------------------------------------CCCTTCCCCGGGCCHHHHTTCCCCC
T ss_pred -------------------------------------------------------cccccCccCccccCHhhcccccccC
Confidence 000114689999999999873
Q ss_pred -CCCccccchhhhhhhhhccc---cCCCCc---------------hHHHHHHHhhcCCCCccccccC------chHHHHH
Q 004987 287 -PVSCASDIYRLGVLLFELFC---PFSTGE---------------EKTRTMSSLRHRVLPPQLLLKF------PKEASFC 341 (720)
Q Consensus 287 -~~s~~sDIwSLGvlL~eLlt---pf~~~~---------------~~~~~~~~i~~~~~p~~~~~~~------p~~~~Li 341 (720)
.++.++|||||||++|||++ ||.... ........+......+.+...+ +...+||
T Consensus 213 ~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 292 (322)
T 3soc_A 213 RDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETI 292 (322)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHH
T ss_pred cCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHH
Confidence 36778999999999999999 554321 1112222233333333332222 2255999
Q ss_pred HHcCCCCCCCCCChHHHHc
Q 004987 342 LWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 342 ~~~L~~dP~~Rpta~eiL~ 360 (720)
.+||+.||.+|||+.|+++
T Consensus 293 ~~cl~~dP~~Rps~~ell~ 311 (322)
T 3soc_A 293 EECWDHDAEARLSAGCVGE 311 (322)
T ss_dssp HHHTCSSGGGSCCHHHHHH
T ss_pred HHHccCChhhCcCHHHHHH
Confidence 9999999999999999986
No 159
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=99.97 E-value=8e-32 Score=282.38 Aligned_cols=198 Identities=14% Similarity=0.193 Sum_probs=155.3
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-
Q 004987 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG- 141 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~g- 141 (720)
..+|..++.+++||||+++++ ++.+.. ++|||| .+++|.+++......+++..++.++.||+.||.|||++|
T Consensus 70 ~~~E~~~l~~l~h~~i~~~~~-~~~~~~-----~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ 143 (287)
T 4f0f_A 70 FQREVFIMSNLNHPNIVKLYG-LMHNPP-----RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNP 143 (287)
T ss_dssp HHHHHHHHTTCCCTTBCCEEE-EETTTT-----EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTSSS
T ss_pred HHHHHHHHHhCCCCCchhhhe-eecCCC-----eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhCCC
Confidence 347888999999999999999 554442 799999 889999999776667999999999999999999999999
Q ss_pred -ceeccCCCCcEEEccCCc-----eEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccC
Q 004987 142 -IVVHNVRPSCFVMSSFNH-----VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 215 (720)
Q Consensus 142 -IvHrDLKP~NILl~~~~~-----vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~ 215 (720)
|+||||||+|||++.++. +||+|||.+......
T Consensus 144 ~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~~~~~~~----------------------------------------- 182 (287)
T 4f0f_A 144 PIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHS----------------------------------------- 182 (287)
T ss_dssp CCBCSCCSGGGEEESCCCTTCSCCEEECCCTTCBCCSSC-----------------------------------------
T ss_pred CeecCCCCcceEEEeccCCCCceeEEeCCCCcccccccc-----------------------------------------
Confidence 999999999999987776 899888876321100
Q ss_pred CCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCcccc--CCCCCcccc
Q 004987 216 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA--GAPVSCASD 293 (720)
Q Consensus 216 ~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~--~~~~s~~sD 293 (720)
.....||+.|+|||++. ...++.++|
T Consensus 183 ----------------------------------------------------~~~~~g~~~y~aPE~~~~~~~~~~~~~D 210 (287)
T 4f0f_A 183 ----------------------------------------------------VSGLLGNFQWMAPETIGAEEESYTEKAD 210 (287)
T ss_dssp ----------------------------------------------------EECCCCCCTTSCGGGSSCSSCEECHHHH
T ss_pred ----------------------------------------------------ccccCCCccccCchhhccCCCCcCchhh
Confidence 01146899999999994 344789999
Q ss_pred chhhhhhhhhccc---cCCCCchH-HHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHc
Q 004987 294 IYRLGVLLFELFC---PFSTGEEK-TRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 294 IwSLGvlL~eLlt---pf~~~~~~-~~~~~~i~~~~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
||||||++|||++ ||...... ......+.....++.+....+ ...+|+.+||+.||.+|||+.++++
T Consensus 211 i~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 282 (287)
T 4f0f_A 211 TYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVK 282 (287)
T ss_dssp HHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCCccccccHHHHHHHHhccCCCCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 9999999999999 66544322 222333333334444444444 4459999999999999999999986
No 160
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=99.97 E-value=1.1e-32 Score=290.34 Aligned_cols=209 Identities=16% Similarity=0.107 Sum_probs=155.2
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004987 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~g 141 (720)
+..+|..+|.+++||||+++++.+...+. ..+++|||| .+++|.+++......+++.+++.++.||+.||.|||++|
T Consensus 57 ~~~~E~~~l~~l~h~~iv~~~~~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ 134 (295)
T 3ugc_A 57 DFEREIEILKSLQHDNIVKYKGVCYSAGR--RNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR 134 (295)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEEEECHHHH--TSCEEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCEeeEEEEEecCCC--CceEEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcCC
Confidence 34478889999999999999994332221 246999999 799999999665556999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004987 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||++........ +
T Consensus 135 ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~---------------------------------~----------- 170 (295)
T 3ugc_A 135 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE---------------------------------F----------- 170 (295)
T ss_dssp CCCSCCSGGGEEEEETTEEEECCCCSCC----------------------------------------------------
T ss_pred cccCCCCHhhEEEcCCCeEEEccCcccccccCCcc---------------------------------e-----------
Confidence 99999999999999999999999988744321100 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004987 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGvlL 301 (720)
........||+.|+|||++.+..++.++|||||||++
T Consensus 171 -------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l 207 (295)
T 3ugc_A 171 -------------------------------------------FKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVL 207 (295)
T ss_dssp ------------------------------------------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred -------------------------------------------eeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHH
Confidence 0000113567889999999988899999999999999
Q ss_pred hhccccCCCCchH------------------HHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004987 302 FELFCPFSTGEEK------------------TRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLltpf~~~~~~------------------~~~~~~i~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||+++..+.... ......+.....++......+...+|+.+||+.||.+|||+.|+++
T Consensus 208 ~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~ 284 (295)
T 3ugc_A 208 YELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL 284 (295)
T ss_dssp HHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHHhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 9999933222111 0122222223233322233344569999999999999999999985
No 161
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=99.97 E-value=6e-33 Score=298.79 Aligned_cols=206 Identities=16% Similarity=0.229 Sum_probs=137.3
Q ss_pred hcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccC
Q 004987 70 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 147 (720)
Q Consensus 70 ~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~~LHs~gIvHrDL 147 (720)
.+..+.||||+++++.+.........+++|||| .|++|.+++... ...+++.+++.++.||+.||.|||++||+||||
T Consensus 75 ~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dl 154 (336)
T 3fhr_A 75 HWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDV 154 (336)
T ss_dssp HHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCC
T ss_pred HHHhcCCCChHHHHHHHhhccCCCceEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCC
Confidence 355689999999999433323223458999999 888999999554 346999999999999999999999999999999
Q ss_pred CCCcEEEcc---CCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004987 148 RPSCFVMSS---FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 148 KP~NILl~~---~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
||+|||++. ++.+||+|||.+.......
T Consensus 155 kp~NIll~~~~~~~~~kl~Dfg~~~~~~~~~------------------------------------------------- 185 (336)
T 3fhr_A 155 KPENLLYTSKEKDAVLKLTDFGFAKETTQNA------------------------------------------------- 185 (336)
T ss_dssp SGGGEEESCSSTTCCEEECCCTTCEEC-----------------------------------------------------
T ss_pred CHHHEEEEecCCCceEEEeccccceeccccc-------------------------------------------------
Confidence 999999986 4459998888763221100
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhc
Q 004987 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 304 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGvlL~eL 304 (720)
.....||+.|+|||++.+..++.++|||||||++|+|
T Consensus 186 -------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l 222 (336)
T 3fhr_A 186 -------------------------------------------LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYIL 222 (336)
T ss_dssp -------------------------------------------------------------CHHHHHHHHHHHHHHHHHH
T ss_pred -------------------------------------------cccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHH
Confidence 0013679999999999888899999999999999999
Q ss_pred cc---cCCCCchHHH---HHHHhhc--CCCCccc-cccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004987 305 FC---PFSTGEEKTR---TMSSLRH--RVLPPQL-LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 305 lt---pf~~~~~~~~---~~~~i~~--~~~p~~~-~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
++ ||........ ....+.. ..++... ....+...+||.+||+.||.+|||+.|+|+||||+..
T Consensus 223 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 294 (336)
T 3fhr_A 223 LCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQS 294 (336)
T ss_dssp HHSSCCC---------------------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTG
T ss_pred HHCCCCCCCccchhhhhhHHHhhhccccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcCcccccc
Confidence 99 5543322111 0111111 1122222 2333445599999999999999999999999999875
No 162
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=99.97 E-value=1.8e-32 Score=295.12 Aligned_cols=207 Identities=15% Similarity=0.124 Sum_probs=160.4
Q ss_pred eeeehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCC----------------------CC
Q 004987 63 RKHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKR----------------------SV 118 (720)
Q Consensus 63 r~~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~----------------------~l 118 (720)
+..+|..+|.++ +||||+++++ ++.... .+|+|||| .|++|.+++..... .+
T Consensus 94 ~~~~E~~~l~~l~~hp~iv~~~~-~~~~~~---~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 169 (344)
T 1rjb_A 94 ALMSELKMMTQLGSHENIVNLLG-ACTLSG---PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVL 169 (344)
T ss_dssp HHHHHHHHHHHHCCCTTBCCEEE-EECSSS---SCEEEEECCTTCBHHHHHHTTTTCC---------------------C
T ss_pred HHHHHHHHHHhhcCCCCeeeEEE-EEeeCC---ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccC
Confidence 344778889999 9999999999 555443 57999999 89999999955432 37
Q ss_pred CHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhh
Q 004987 119 DVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDM 198 (720)
Q Consensus 119 ~~~~~~~i~~QIl~aL~~LHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~ 198 (720)
++..++.++.||+.||.|||++||+||||||+|||++.++.++|+|||++........
T Consensus 170 ~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~---------------------- 227 (344)
T 1rjb_A 170 TFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSN---------------------- 227 (344)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTT----------------------
T ss_pred CHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEEcCCCcEEeCCCccCcccccCcc----------------------
Confidence 9999999999999999999999999999999999999999999999888743211100
Q ss_pred HhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCccc
Q 004987 199 LQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYA 278 (720)
Q Consensus 199 ~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~ 278 (720)
. .......||+.|+
T Consensus 228 -----------~-------------------------------------------------------~~~~~~~~t~~y~ 241 (344)
T 1rjb_A 228 -----------Y-------------------------------------------------------VVRGNARLPVKWM 241 (344)
T ss_dssp -----------S-------------------------------------------------------EEETTEEECGGGC
T ss_pred -----------c-------------------------------------------------------eeccCccCccCcc
Confidence 0 0001135788999
Q ss_pred CCccccCCCCCccccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCC
Q 004987 279 SPEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK 354 (720)
Q Consensus 279 APE~l~~~~~s~~sDIwSLGvlL~eLlt----pf~~~~~~~~~~~~i~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpt 354 (720)
|||++.+..++.++|||||||++|||++ ||............+.....++......+...+|+.+||+.||.+|||
T Consensus 242 aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps 321 (344)
T 1rjb_A 242 APESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPS 321 (344)
T ss_dssp CHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred CHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcC
Confidence 9999988889999999999999999997 666554443444444444333333333445569999999999999999
Q ss_pred hHHHHcC
Q 004987 355 MGELLQS 361 (720)
Q Consensus 355 a~eiL~h 361 (720)
+.+++++
T Consensus 322 ~~~l~~~ 328 (344)
T 1rjb_A 322 FPNLTSF 328 (344)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999973
No 163
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=99.97 E-value=1.1e-32 Score=300.64 Aligned_cols=209 Identities=13% Similarity=0.143 Sum_probs=159.5
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC------CCCCHHHHHHHHHHHHHHHH
Q 004987 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK------RSVDVYECLHIFRQIVEIVY 135 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~------~~l~~~~~~~i~~QIl~aL~ 135 (720)
+..+|..++.+++|||||++++ ++.... ..|+|||| .|++|.+++.... ..+++.+++.++.||+.||.
T Consensus 120 ~~~~E~~~l~~l~hpnIv~~~~-~~~~~~---~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~ 195 (367)
T 3l9p_A 120 DFLMEALIISKFNHQNIVRCIG-VSLQSL---PRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 195 (367)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EECSSS---SCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCCeEEE-EEecCC---CCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHH
Confidence 4457888999999999999999 554443 45999999 7999999994322 35899999999999999999
Q ss_pred HHHHcCceeccCCCCcEEEccCC---ceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccccccccc
Q 004987 136 AAHSQGIVVHNVRPSCFVMSSFN---HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQL 212 (720)
Q Consensus 136 ~LHs~gIvHrDLKP~NILl~~~~---~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgl 212 (720)
|||++||+||||||+|||++.++ .+||+|||+++..... ..
T Consensus 196 ~LH~~~ivHrDlkp~NIll~~~~~~~~~kL~DFG~a~~~~~~----------------------------------~~-- 239 (367)
T 3l9p_A 196 YLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA----------------------------------GY-- 239 (367)
T ss_dssp HHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHHH----------------------------------SS--
T ss_pred HHHhCCeeCCCCChhhEEEecCCCCceEEECCCccccccccc----------------------------------cc--
Confidence 99999999999999999999555 4999888877321000 00
Q ss_pred ccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccc
Q 004987 213 VTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCAS 292 (720)
Q Consensus 213 a~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~s 292 (720)
........||+.|+|||++.+..++.++
T Consensus 240 ----------------------------------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~ 267 (367)
T 3l9p_A 240 ----------------------------------------------------YRKGGCAMLPVKWMPPEAFMEGIFTSKT 267 (367)
T ss_dssp ----------------------------------------------------CTTCCGGGSCGGGCCHHHHHHCCCCHHH
T ss_pred ----------------------------------------------------cccCCCcCCcccEECHHHhcCCCCCcHH
Confidence 0000114679999999999988899999
Q ss_pred cchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004987 293 DIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 293 DIwSLGvlL~eLlt----pf~~~~~~~~~~~~i~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
|||||||++|||++ ||...... .....+..+..++......+...+|+.+||+.||.+||++.+|+++.++
T Consensus 268 DvwslG~il~ellt~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~ 342 (367)
T 3l9p_A 268 DTWSFGVLLWEIFSLGYMPYPSKSNQ-EVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEY 342 (367)
T ss_dssp HHHHHHHHHHHHHTTSCCSSTTCCHH-HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCCCCCCHH-HHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence 99999999999997 55554433 4444444443333322333445699999999999999999999987654
No 164
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=99.97 E-value=2.7e-32 Score=287.93 Aligned_cols=209 Identities=17% Similarity=0.129 Sum_probs=158.5
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004987 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~g 141 (720)
+..+|..+|.+++||||+++++ ++.... ...+++|||| .+++|.+++......+++.+++.++.||+.||.|||++|
T Consensus 69 ~~~~E~~~l~~l~h~~i~~~~~-~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ 146 (302)
T 4e5w_A 69 DLKKEIEILRNLYHENIVKYKG-ICTEDG-GNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQ 146 (302)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEE-EEEC----CCEEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCeeeeee-EEecCC-CceEEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcCC
Confidence 3447888999999999999999 444332 2357999999 789999999555556999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004987 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.++|+|||.+......... +
T Consensus 147 i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~--------------------------------~----------- 183 (302)
T 4e5w_A 147 YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEY--------------------------------Y----------- 183 (302)
T ss_dssp EECSCCSGGGEEEEETTEEEECCCTTCEECCTTCCE--------------------------------E-----------
T ss_pred cccCCCchheEEEcCCCCEEECcccccccccCCCcc--------------------------------e-----------
Confidence 999999999999999999999999887443221000 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004987 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGvlL 301 (720)
.......||+.|+|||++.+..++.++|||||||++
T Consensus 184 --------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 219 (302)
T 4e5w_A 184 --------------------------------------------TVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTL 219 (302)
T ss_dssp --------------------------------------------ECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHH
T ss_pred --------------------------------------------eccCCCCCCccccCCeeecCCCCCcchhHHHHHHHH
Confidence 000113578899999999988899999999999999
Q ss_pred hhccccCCC-----------------CchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004987 302 FELFCPFST-----------------GEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLltpf~~-----------------~~~~~~~~~~i~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|+|+++..+ ..........+......+......+...+|+.+||+.||.+|||+.++++
T Consensus 220 ~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 295 (302)
T 4e5w_A 220 HELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIE 295 (302)
T ss_dssp HHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred HHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHhccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHH
Confidence 999993222 12222333333333333332333345569999999999999999999986
No 165
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=99.97 E-value=3.8e-32 Score=281.93 Aligned_cols=203 Identities=15% Similarity=0.173 Sum_probs=159.0
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004987 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~gIv 143 (720)
.+|..++.+++||||+++++ ++.... .+++|||| .+++|.+++...+..+++.+++.++.||+.||.|||++||+
T Consensus 51 ~~E~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~ 126 (268)
T 3sxs_A 51 FQEAQTMMKLSHPKLVKFYG-VCSKEY---PIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFI 126 (268)
T ss_dssp HHHHHHHHHCCCTTBCCEEE-EECSSS---SEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHhCCCCCEeeEEE-EEccCC---ceEEEEEccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 46778999999999999999 554443 57999999 89999999966555699999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004987 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+||+++.++.++|+|||.+.........
T Consensus 127 H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~---------------------------------------------- 160 (268)
T 3sxs_A 127 HRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYV---------------------------------------------- 160 (268)
T ss_dssp ESSCSGGGEEECTTCCEEECCTTCEEECCTTCEE----------------------------------------------
T ss_pred cCCcCcceEEECCCCCEEEccCccceecchhhhh----------------------------------------------
Confidence 9999999999999999999998887432111000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004987 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGvlL~e 303 (720)
......+|+.|+|||++.+..++.++|||||||++|+
T Consensus 161 -------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ 197 (268)
T 3sxs_A 161 -------------------------------------------SSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWE 197 (268)
T ss_dssp -------------------------------------------ECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHH
T ss_pred -------------------------------------------cccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHH
Confidence 0001346788999999998889999999999999999
Q ss_pred ccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004987 304 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 304 Llt----pf~~~~~~~~~~~~i~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~h 361 (720)
|++ ||...... .....+.....+.......+...+|+.+||+.||.+|||+.+++++
T Consensus 198 l~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~ 258 (268)
T 3sxs_A 198 VFSLGKMPYDLYTNS-EVVLKVSQGHRLYRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSS 258 (268)
T ss_dssp HHTTTCCTTTTSCHH-HHHHHHHTTCCCCCCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred HHcCCCCCccccChH-HHHHHHHcCCCCCCCCcChHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 997 66555444 3333333332222222233455699999999999999999999973
No 166
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=99.97 E-value=4.3e-32 Score=291.00 Aligned_cols=204 Identities=15% Similarity=0.111 Sum_probs=157.2
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004987 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~g 141 (720)
+..+|..++.+++||||+++++ ++... ..+++||| .+++|.+++......+++..++.++.||+.||.|||++|
T Consensus 63 ~~~~E~~~l~~l~hp~iv~~~~-~~~~~----~~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ 137 (327)
T 3lzb_A 63 EILDEAYVMASVDNPHVCRLLG-ICLTS----TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 137 (327)
T ss_dssp HHHHHHHHHTTCCBTTBCCCCE-EEESS----SEEEEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCeeEEEE-EEecC----CceEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence 3447888999999999999999 55544 26788888 999999999766667999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004987 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||++...+..... .
T Consensus 138 ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~~~--------------------------------~----------- 174 (327)
T 3lzb_A 138 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE--------------------------------Y----------- 174 (327)
T ss_dssp CCCSCCCGGGEEEEETTEEEECCTTC------------------------------------------------------
T ss_pred CcCCCCCHHHEEEcCCCCEEEccCcceeEccCcccc--------------------------------c-----------
Confidence 999999999999999999999999888543221000 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004987 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGvlL 301 (720)
......||+.|+|||++.+..++.++|||||||++
T Consensus 175 ---------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il 209 (327)
T 3lzb_A 175 ---------------------------------------------HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTV 209 (327)
T ss_dssp --------------------------------------------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred ---------------------------------------------cccCCCccccccCHHHHcCCCCChHHHHHHHHHHH
Confidence 00013568899999999999999999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004987 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~i~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||...... .....+.....++......+...+|+.+||+.||.+||++.|+++
T Consensus 210 ~ell~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 271 (327)
T 3lzb_A 210 WELMTFGSKPYDGIPAS-EISSILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELII 271 (327)
T ss_dssp HHHHTTSCCTTTTCCGG-GHHHHHHTTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHCCCCCCCCCCHH-HHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 99998 55544332 233344444333333334455669999999999999999999986
No 167
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=99.97 E-value=2.5e-32 Score=295.66 Aligned_cols=208 Identities=20% Similarity=0.224 Sum_probs=160.6
Q ss_pred eeeehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCC------------------------
Q 004987 63 RKHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKR------------------------ 116 (720)
Q Consensus 63 r~~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~------------------------ 116 (720)
+..+|..++.++ +|||||++++ ++.... ..+++|||| .|++|.+++.....
T Consensus 71 ~~~~E~~~l~~l~~hpniv~~~~-~~~~~~--~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (359)
T 3vhe_A 71 ALMSELKILIHIGHHLNVVNLLG-ACTKPG--GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPV 147 (359)
T ss_dssp HHHHHHHHHHHHCCCTTBCCEEE-EECSTT--SCCEEEEECCTTEEHHHHHHTTTTSBCSCC------------------
T ss_pred HHHHHHHHHHhhcCCcceeeeee-eeecCC--CceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccch
Confidence 344778888888 7999999999 544432 246999999 89999999954322
Q ss_pred -----------------------------------------CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEc
Q 004987 117 -----------------------------------------SVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMS 155 (720)
Q Consensus 117 -----------------------------------------~l~~~~~~~i~~QIl~aL~~LHs~gIvHrDLKP~NILl~ 155 (720)
.+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~ 227 (359)
T 3vhe_A 148 DLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS 227 (359)
T ss_dssp ------------------------------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC
T ss_pred hhhccccccCccccccccccccccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEc
Confidence 289999999999999999999999999999999999999
Q ss_pred cCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccCCCccccc
Q 004987 156 SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTH 235 (720)
Q Consensus 156 ~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~ 235 (720)
.++.++|+|||++....... ++
T Consensus 228 ~~~~~kl~Dfg~a~~~~~~~---------------------------------~~------------------------- 249 (359)
T 3vhe_A 228 EKNVVKICDFGLARDIYKDP---------------------------------DY------------------------- 249 (359)
T ss_dssp GGGCEEECCCGGGSCTTSCT---------------------------------TC-------------------------
T ss_pred CCCcEEEEeccceeeecccc---------------------------------cc-------------------------
Confidence 99999999888874331110 00
Q ss_pred cccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhccc----cCCCC
Q 004987 236 VVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC----PFSTG 311 (720)
Q Consensus 236 ~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGvlL~eLlt----pf~~~ 311 (720)
.......||+.|+|||++.+..++.++|||||||++|||++ ||...
T Consensus 250 ------------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~ 299 (359)
T 3vhe_A 250 ------------------------------VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 299 (359)
T ss_dssp ------------------------------EEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred ------------------------------hhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCcc
Confidence 00011467999999999998889999999999999999997 66655
Q ss_pred chHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004987 312 EEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 312 ~~~~~~~~~i~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~h 361 (720)
.........+.....++......+...+|+.+||++||.+|||+.|+++|
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~ 349 (359)
T 3vhe_A 300 KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 349 (359)
T ss_dssp CCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred chhHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHH
Confidence 44444444444443333333344556699999999999999999999973
No 168
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=99.97 E-value=3.7e-32 Score=297.86 Aligned_cols=205 Identities=16% Similarity=0.160 Sum_probs=161.0
Q ss_pred eeeehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC---------------CCCCHHHHHH
Q 004987 63 RKHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---------------RSVDVYECLH 125 (720)
Q Consensus 63 r~~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~---------------~~l~~~~~~~ 125 (720)
+..+|..++.++ +|||||++++ ++.... .+++|||| .|++|.+++.... ..+++.+++.
T Consensus 120 ~~~~E~~~l~~l~~hpnIv~~~~-~~~~~~---~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 195 (382)
T 3tt0_A 120 DLISEMEMMKMIGKHKNIINLLG-ACTQDG---PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVS 195 (382)
T ss_dssp HHHHHHHHHHHHCCCTTBCCEEE-EECSSS---SCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHH
T ss_pred HHHHHHHHHHHhcCCchhhhhee-eeccCC---ceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHH
Confidence 344788889888 9999999999 555443 46999999 8899999995432 3599999999
Q ss_pred HHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcc
Q 004987 126 IFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRL 205 (720)
Q Consensus 126 i~~QIl~aL~~LHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~ 205 (720)
|+.||+.||.|||++||+||||||+|||++.++.+||+|||++...+.....
T Consensus 196 i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~---------------------------- 247 (382)
T 3tt0_A 196 CAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY---------------------------- 247 (382)
T ss_dssp HHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECSCSCCCCSSCCCTT----------------------------
T ss_pred HHHHHHHHHHHHHhCCEecCCCCcceEEEcCCCcEEEcccCccccccccccc----------------------------
Confidence 9999999999999999999999999999999999999999988543221000
Q ss_pred cccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC
Q 004987 206 RREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG 285 (720)
Q Consensus 206 ~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~ 285 (720)
.......||+.|+|||++.+
T Consensus 248 ------------------------------------------------------------~~~~~~~~t~~y~aPE~~~~ 267 (382)
T 3tt0_A 248 ------------------------------------------------------------KKTTNGRLPVKWMAPEALFD 267 (382)
T ss_dssp ------------------------------------------------------------CCCTTCCCGGGGSCHHHHHS
T ss_pred ------------------------------------------------------------ccccCCCCCcceeCHHHhcC
Confidence 00011356889999999999
Q ss_pred CCCCccccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004987 286 APVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 286 ~~~s~~sDIwSLGvlL~eLlt----pf~~~~~~~~~~~~i~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
..++.++|||||||++|||++ ||..... ......+.....++......+...+|+.+||+.||.+|||+.|+++
T Consensus 268 ~~~~~~~DiwslG~il~ellt~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~ 345 (382)
T 3tt0_A 268 RIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV-EELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 345 (382)
T ss_dssp CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH-HHHHHHHHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH-HHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 989999999999999999998 5554433 3444555544433333334455569999999999999999999997
No 169
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=99.97 E-value=1.6e-31 Score=282.32 Aligned_cols=214 Identities=16% Similarity=0.187 Sum_probs=161.7
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHh-CCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004987 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLD-KPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~~g~sL~~~L~-~~~~~l~~~~~~~i~~QIl~aL~~LHs~gI 142 (720)
..+|..++.+++||||+++++ ++... ....+|+||||..++|.+++. .....+++.+++.++.||+.||.|||++||
T Consensus 53 ~~~E~~~l~~l~h~~i~~~~~-~~~~~-~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i 130 (305)
T 2wtk_C 53 VKKEIQLLRRLRHKNVIQLVD-VLYNE-EKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGI 130 (305)
T ss_dssp HHHHHHHHTTCCCTTBCCEEE-EEECC----CEEEEEECCSEEHHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHhcCCCCeeEEEE-EEEcC-CCCeEEEEehhccCCHHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 346778999999999999999 44222 223689999995556888884 334569999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004987 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.++|+|||.+.........
T Consensus 131 ~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~--------------------------------------------- 165 (305)
T 2wtk_C 131 VHKDIKPGNLLLTTGGTLKISALGVAEALHPFAAD--------------------------------------------- 165 (305)
T ss_dssp ECSCCSGGGEEECTTCCEEECCCTTCEECCTTCSS---------------------------------------------
T ss_pred eecCCCcccEEEcCCCcEEeeccccccccCccccc---------------------------------------------
Confidence 99999999999999999999998887432111000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC--CCccccchhhhhh
Q 004987 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP--VSCASDIYRLGVL 300 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~--~s~~sDIwSLGvl 300 (720)
.......||+.|+|||++.+.. ++.++|||||||+
T Consensus 166 -------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~i 202 (305)
T 2wtk_C 166 -------------------------------------------DTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVT 202 (305)
T ss_dssp -------------------------------------------CEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHH
T ss_pred -------------------------------------------cccccCCCCCCCcChhhccCcccCCcchhhHHHHHHH
Confidence 0001136899999999998754 4789999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004987 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 301 L~eLlt---pf~~~~~~~~~~~~i~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
+|||++ ||...... .....+.....+ ......+...+||.+||+.||.+|||+.|+++||||+....
T Consensus 203 l~~l~~g~~p~~~~~~~-~~~~~i~~~~~~-~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~~ 272 (305)
T 2wtk_C 203 LYNITTGLYPFEGDNIY-KLFENIGKGSYA-IPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKHP 272 (305)
T ss_dssp HHHHHHSSCSCCCSSHH-HHHHHHHHCCCC-CCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHSHHHHSCCC
T ss_pred HHHHHhCCCCCCCchHH-HHHHHHhcCCCC-CCCccCHHHHHHHHHHccCChhhCCCHHHHhcCcccccCCC
Confidence 999999 66654433 344444443221 11123344569999999999999999999999999987644
No 170
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=99.97 E-value=3e-32 Score=286.46 Aligned_cols=205 Identities=18% Similarity=0.265 Sum_probs=154.6
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004987 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~g 141 (720)
+..+|..+|.+++||||+++++ +.... .+++|||| .|++|.+++......+++.+++.++.||+.||.|||++|
T Consensus 66 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~ 140 (289)
T 3og7_A 66 AFKNEVGVLRKTRHVNILLFMG-YSTAP----QLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS 140 (289)
T ss_dssp HHHHHHHHHTTCCCTTBCCEEE-EECSS----SCEEEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCcEEEEEe-eccCC----ccEEEEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3447888999999999999999 44332 46899999 889999999666667999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004987 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.++|+|||++.........
T Consensus 141 i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-------------------------------------------- 176 (289)
T 3og7_A 141 IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGS-------------------------------------------- 176 (289)
T ss_dssp CCCSCCCGGGEEEETTTEEEECCCC-------------------------------------------------------
T ss_pred cccccCccceEEECCCCCEEEccceecccccccccc--------------------------------------------
Confidence 999999999999999999999999887432111000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCcccc---CCCCCccccchhhh
Q 004987 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA---GAPVSCASDIYRLG 298 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~---~~~~s~~sDIwSLG 298 (720)
.......||+.|+|||++. +..++.++||||||
T Consensus 177 --------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG 212 (289)
T 3og7_A 177 --------------------------------------------HQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFG 212 (289)
T ss_dssp ---------------------------------------------------CCCTTCCHHHHC----CCSCHHHHHHHHH
T ss_pred --------------------------------------------ccccccCCCccccCchhhcccCCCCCCcccchHHHH
Confidence 0001146899999999996 55689999999999
Q ss_pred hhhhhccc---cCCCCchHHHHHHHhhcCCCCccc---cccCc-hHHHHHHHcCCCCCCCCCChHHHHc
Q 004987 299 VLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQL---LLKFP-KEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 299 vlL~eLlt---pf~~~~~~~~~~~~i~~~~~p~~~---~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|++|+|++ ||............+..+..++.+ ...+| ...+|+.+||+.||.+|||+.++++
T Consensus 213 ~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~ 281 (289)
T 3og7_A 213 IVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILA 281 (289)
T ss_dssp HHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCCCTTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHCCCCccccchHHHHHHHhcccccCcchhhccccCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 99999999 776655555555555554444332 22334 4459999999999999999999986
No 171
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=99.97 E-value=2.1e-32 Score=299.34 Aligned_cols=204 Identities=16% Similarity=0.178 Sum_probs=158.2
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004987 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~g 141 (720)
+..+|..+|.+++|||||++++ ++.... .+|+|||| .|++|.+++...+..+++..++.++.||+.||.|||++|
T Consensus 158 ~~~~E~~~l~~l~hpniv~~~~-~~~~~~---~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ 233 (377)
T 3cbl_A 158 KFLQEARILKQYSHPNIVRLIG-VCTQKQ---PIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC 233 (377)
T ss_dssp TTTHHHHHHTTCCCTTBCCEEE-EECSSS---SCEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCEEEEEE-EEecCC---CcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3447888999999999999999 554443 57999999 899999999665556999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004987 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||++.........
T Consensus 234 ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~-------------------------------------------- 269 (377)
T 3cbl_A 234 CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYA-------------------------------------------- 269 (377)
T ss_dssp EECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEE--------------------------------------------
T ss_pred cCCcccCHHHEEEcCCCcEEECcCCCceecCCCcee--------------------------------------------
Confidence 999999999999999999999888877432110000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004987 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGvlL 301 (720)
.......+++.|+|||++.+..++.++|||||||++
T Consensus 270 --------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il 305 (377)
T 3cbl_A 270 --------------------------------------------ASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILL 305 (377)
T ss_dssp --------------------------------------------CCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHH
T ss_pred --------------------------------------------ecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHH
Confidence 000002357789999999988899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHc
Q 004987 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~i~~~~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||...... .....+..+..++. +..+| ...+||.+||+.||.+|||+.++++
T Consensus 306 ~el~t~g~~p~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~ 367 (377)
T 3cbl_A 306 WETFSLGASPYPNLSNQ-QTREFVEKGGRLPC-PELCPDAVFRLMEQCWAYEPGQRPSFSTIYQ 367 (377)
T ss_dssp HHHHTTSCCSSTTSCHH-HHHHHHHTTCCCCC-CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHhCCCCCCCCCCHH-HHHHHHHcCCCCCC-CCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 99997 66654433 33333443333322 23344 4459999999999999999999985
No 172
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=99.97 E-value=7.1e-32 Score=295.54 Aligned_cols=205 Identities=19% Similarity=0.227 Sum_probs=152.8
Q ss_pred ehhhhcccCC-CC-----CceecccceeecCCCCCcEEEEEecCCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHH
Q 004987 66 SDGVELTHGD-HL-----RNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 66 ~e~~~L~~l~-Hp-----nIV~l~~~~~~~~~~~~~~~lV~E~~g~sL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~~LH 138 (720)
+|..++..+. |+ +|+++++ ++.... .+|+||||.+++|.+++... ...+++..++.++.||+.||.|||
T Consensus 99 ~e~~~l~~l~~~~~~~~~~iv~~~~-~~~~~~---~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH 174 (382)
T 2vx3_A 99 IEVRLLELMNKHDTEMKYYIVHLKR-HFMFRN---HLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLA 174 (382)
T ss_dssp HHHHHHHHHHHCSSGGGGGBCCEEE-EEEETT---EEEEEEECCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcccccceeEEEeee-eeccCC---ceEEEEecCCCCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhc
Confidence 4555665554 44 4888888 444443 68999999777999999543 345999999999999999999999
Q ss_pred --HcCceeccCCCCcEEEc--cCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccccccccccc
Q 004987 139 --SQGIVVHNVRPSCFVMS--SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVT 214 (720)
Q Consensus 139 --s~gIvHrDLKP~NILl~--~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~ 214 (720)
..|||||||||+|||++ ..+.+||+|||++...+..
T Consensus 175 ~~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~~~~~---------------------------------------- 214 (382)
T 2vx3_A 175 TPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQR---------------------------------------- 214 (382)
T ss_dssp STTTCEECCCCSGGGEEESSTTSCCEEECCCTTCEETTCC----------------------------------------
T ss_pred cCCCCEEcCCCCcccEEEecCCCCcEEEEeccCceecccc----------------------------------------
Confidence 57999999999999995 4778999888877332110
Q ss_pred CCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccc
Q 004987 215 APTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDI 294 (720)
Q Consensus 215 ~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDI 294 (720)
....+||+.|+|||++.+..++.++||
T Consensus 215 -----------------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~Di 241 (382)
T 2vx3_A 215 -----------------------------------------------------IYQYIQSRFYRSPEVLLGMPYDLAIDM 241 (382)
T ss_dssp -----------------------------------------------------CCSSCSCGGGCCHHHHTTCCCCTHHHH
T ss_pred -----------------------------------------------------cccccCCccccChHHHcCCCCCcHHHH
Confidence 011468999999999999999999999
Q ss_pred hhhhhhhhhccc---cCCCCchHHHHHHHhhc-CCCCcccccc-------------------------------------
Q 004987 295 YRLGVLLFELFC---PFSTGEEKTRTMSSLRH-RVLPPQLLLK------------------------------------- 333 (720)
Q Consensus 295 wSLGvlL~eLlt---pf~~~~~~~~~~~~i~~-~~~p~~~~~~------------------------------------- 333 (720)
|||||++|||++ ||............+.. +..++.+...
T Consensus 242 wSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 321 (382)
T 2vx3_A 242 WSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLH 321 (382)
T ss_dssp HHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTCTTHHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHH
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhHHHHHHHHhccccccccccccccccccCCcchhhHH
Confidence 999999999999 67665444322222211 1111110000
Q ss_pred ------------------------CchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004987 334 ------------------------FPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 334 ------------------------~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
.+...+||.+||++||++|||+.|+|+||||+..
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~Rpta~e~L~hp~f~~~ 379 (382)
T 2vx3_A 322 NILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKKT 379 (382)
T ss_dssp HHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGCC-
T ss_pred HHhhccccCCCccccccccccchhhHHHHHHHHHhcCCChhhCCCHHHHhcCcccccC
Confidence 0134599999999999999999999999999875
No 173
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=99.97 E-value=3.6e-32 Score=291.05 Aligned_cols=202 Identities=15% Similarity=0.142 Sum_probs=158.5
Q ss_pred eeeehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC---------------CCCCHHHHHH
Q 004987 63 RKHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---------------RSVDVYECLH 125 (720)
Q Consensus 63 r~~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~---------------~~l~~~~~~~ 125 (720)
+..+|..+|.++ +||||+++++ ++.... .+|+|||| .+++|.+++.... ..+++.+++.
T Consensus 71 ~~~~E~~~l~~l~~hp~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (327)
T 1fvr_A 71 DFAGELEVLCKLGHHPNIINLLG-ACEHRG---YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLH 146 (327)
T ss_dssp HHHHHHHHHTTCCCCTTBCCEEE-EEEETT---EEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHH
T ss_pred HHHHHHHHHHhccCCCchhhhce-eeeeCC---ceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHH
Confidence 344678899999 9999999999 555443 57999999 7999999996543 3599999999
Q ss_pred HHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcc
Q 004987 126 IFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRL 205 (720)
Q Consensus 126 i~~QIl~aL~~LHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~ 205 (720)
++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 147 i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kL~Dfg~~~~~~~~~------------------------------ 196 (327)
T 1fvr_A 147 FAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYV------------------------------ 196 (327)
T ss_dssp HHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEESSCEEC------------------------------
T ss_pred HHHHHHHHHHHHHhCCccCCCCccceEEEcCCCeEEEcccCcCccccccc------------------------------
Confidence 99999999999999999999999999999999999999888773210000
Q ss_pred cccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC
Q 004987 206 RREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG 285 (720)
Q Consensus 206 ~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~ 285 (720)
......+++.|+|||++.+
T Consensus 197 -------------------------------------------------------------~~~~~~~~~~y~aPE~~~~ 215 (327)
T 1fvr_A 197 -------------------------------------------------------------KKTMGRLPVRWMAIESLNY 215 (327)
T ss_dssp -------------------------------------------------------------CC----CCTTTCCHHHHHH
T ss_pred -------------------------------------------------------------cccCCCCCccccChhhhcc
Confidence 0001346889999999988
Q ss_pred CCCCccccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004987 286 APVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 286 ~~~s~~sDIwSLGvlL~eLlt----pf~~~~~~~~~~~~i~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
..++.++|||||||++|||++ ||...... .....+..+..++......+...+||.+||..||.+|||+.++++
T Consensus 216 ~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 293 (327)
T 1fvr_A 216 SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA-ELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILV 293 (327)
T ss_dssp CEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-HHHHHGGGTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred ccCCchhcchHHHHHHHHHHcCCCCCCCCCcHH-HHHHHhhcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 889999999999999999997 55554333 444555544333333334455669999999999999999999986
No 174
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=99.97 E-value=3.1e-32 Score=291.87 Aligned_cols=204 Identities=15% Similarity=0.117 Sum_probs=159.4
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004987 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~g 141 (720)
+..+|..++++++|||||++++ ++..+ ..++++|| .+++|.+++......+++..++.|+.||+.||.|||++|
T Consensus 63 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~----~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ 137 (327)
T 3poz_A 63 EILDEAYVMASVDNPHVCRLLG-ICLTS----TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 137 (327)
T ss_dssp HHHHHHHHHHHCCBTTBCCEEE-EEESS----SEEEEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCEeEEEE-EEecC----CeEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence 3446888999999999999999 55544 26788888 999999999766667999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004987 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||+++..+.....
T Consensus 138 ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~-------------------------------------------- 173 (327)
T 3poz_A 138 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE-------------------------------------------- 173 (327)
T ss_dssp CCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTCC---------------------------------------------
T ss_pred eeCCCCChheEEECCCCCEEEccCcceeEccCCccc--------------------------------------------
Confidence 999999999999999999999988887432211000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004987 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGvlL 301 (720)
.......||+.|+|||++.+..++.++|||||||++
T Consensus 174 --------------------------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il 209 (327)
T 3poz_A 174 --------------------------------------------YHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTV 209 (327)
T ss_dssp --------------------------------------------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred --------------------------------------------ccccCCCccccccChHHhccCCCCchhhhhhhHHHH
Confidence 000113568899999999999999999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004987 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~i~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||...... .....+..+..++......+...+|+.+||+.||.+||++.++++
T Consensus 210 ~ellt~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~ 271 (327)
T 3poz_A 210 WELMTFGSKPYDGIPAS-EISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELII 271 (327)
T ss_dssp HHHHTTSCCTTTTCCGG-GHHHHHHTTCCCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHH
T ss_pred HHHHhcCCCCccCCCHH-HHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 99998 55544332 233334443333333334455669999999999999999999986
No 175
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=99.97 E-value=3.2e-32 Score=285.74 Aligned_cols=207 Identities=18% Similarity=0.199 Sum_probs=160.9
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004987 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~g 141 (720)
+..+|..++.+++||||+++++ ++.... .+|+|||| .+++|.+++.... .+++.+++.++.||+.||.|||++|
T Consensus 67 ~~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH~~~ 141 (287)
T 2wei_A 67 TILREVELLKKLDHPNIMKLFE-ILEDSS---SFYIVGELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMHKHN 141 (287)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEE-EEECSS---EEEEEECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhccCCCccEEEE-EEeCCC---eEEEEEEccCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3346788999999999999999 554443 57999999 8999999985433 4999999999999999999999999
Q ss_pred ceeccCCCCcEEEccC---CceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCC
Q 004987 142 IVVHNVRPSCFVMSSF---NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 142 IvHrDLKP~NILl~~~---~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~ 218 (720)
|+||||||+||+++.+ +.++|+|||.+.......
T Consensus 142 i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~------------------------------------------- 178 (287)
T 2wei_A 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT------------------------------------------- 178 (287)
T ss_dssp CCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCS-------------------------------------------
T ss_pred eeccCCChhhEEEecCCCcccEEEeccCcceeecCCC-------------------------------------------
Confidence 9999999999999754 369998888763321110
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhh
Q 004987 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
......||+.|+|||++.+. ++.++||||||
T Consensus 179 ------------------------------------------------~~~~~~~~~~y~aPE~~~~~-~~~~~Di~slG 209 (287)
T 2wei_A 179 ------------------------------------------------KMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAG 209 (287)
T ss_dssp ------------------------------------------------SCSCHHHHHTTCCHHHHTTC-CCTHHHHHHHH
T ss_pred ------------------------------------------------ccccccCcccccChHHhcCC-CCCchhhHhHH
Confidence 00013578999999999765 89999999999
Q ss_pred hhhhhccc---cCCCCchHHHHHHHhhcCCCCc---cccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004987 299 VLLFELFC---PFSTGEEKTRTMSSLRHRVLPP---QLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 299 vlL~eLlt---pf~~~~~~~~~~~~i~~~~~p~---~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|++|+|++ ||...... .....+..+..+. .+....+...+||.+||++||.+|||+.|+|+||||+..
T Consensus 210 ~~l~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~~~~~ 283 (287)
T 2wei_A 210 VILYILLSGTPPFYGKNEY-DILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKY 283 (287)
T ss_dssp HHHHHHHHSSCSSCCSSHH-HHHHHHHHCCCCCCSGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHHH
T ss_pred HHHHHHHhCCCCCCCCCHH-HHHHHHHcCCCCCCchhhhhcCHHHHHHHHHHcccChhhCcCHHHHhcCHHHhcc
Confidence 99999999 66655443 3444444443322 222333455699999999999999999999999999764
No 176
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=99.97 E-value=3e-32 Score=289.57 Aligned_cols=205 Identities=16% Similarity=0.194 Sum_probs=152.7
Q ss_pred hhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHc-Cceecc
Q 004987 68 GVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ-GIVVHN 146 (720)
Q Consensus 68 ~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~-gIvHrD 146 (720)
..++..++||||+++++ ++.... .+|+||||.++.+..++......+++..++.++.||+.||.|||++ ||+|||
T Consensus 75 ~~~~~~~~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~d 150 (318)
T 2dyl_A 75 DVVLKSHDCPYIVQCFG-TFITNT---DVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRD 150 (318)
T ss_dssp HHHHHTTTCTTBCCEEE-EEECSS---EEEEEECCCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_pred HHHHHhcCCCceeeEEE-EEecCC---cEEEEEeccCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCC
Confidence 34677889999999999 554443 6799999987777776654445699999999999999999999995 999999
Q ss_pred CCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccc
Q 004987 147 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 226 (720)
Q Consensus 147 LKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~~~~~~ 226 (720)
|||+|||++.++.++|+|||.+.......
T Consensus 151 lkp~Nil~~~~~~~kl~dfg~~~~~~~~~--------------------------------------------------- 179 (318)
T 2dyl_A 151 VKPSNILLDERGQIKLCDFGISGRLVDDK--------------------------------------------------- 179 (318)
T ss_dssp CCGGGEEECTTSCEEECCCTTC----------------------------------------------------------
T ss_pred CCHHHEEECCCCCEEEEECCCchhccCCc---------------------------------------------------
Confidence 99999999999999999888773321100
Q ss_pred cCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCcccc-----CCCCCccccchhhhhhh
Q 004987 227 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-----GAPVSCASDIYRLGVLL 301 (720)
Q Consensus 227 q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~-----~~~~s~~sDIwSLGvlL 301 (720)
......||+.|+|||++. +..++.++|||||||++
T Consensus 180 ----------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il 219 (318)
T 2dyl_A 180 ----------------------------------------AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISL 219 (318)
T ss_dssp -----------------------------------------------CCTTCCHHHHC--------CCTHHHHHHHHHHH
T ss_pred ----------------------------------------cccccCCCccccChhhcccccccccCCccccchhhHHHHH
Confidence 000136799999999995 44589999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCc--cccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004987 302 FELFC---PFSTGEEKTRTMSSLRHRVLPP--QLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~i~~~~~p~--~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|||++ ||.........+..+.....+. ......+...+||.+||+.||.+||++.++|+||||+..
T Consensus 220 ~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~ 290 (318)
T 2dyl_A 220 VELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIKRY 290 (318)
T ss_dssp HHHHHSSCTTTTCCSHHHHHHHHHHSCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHHH
T ss_pred HHHHhCCCCCCCCCccHHHHHHHhccCCCCCCccCCCCHHHHHHHHHHccCChhHCcCHHHHhhCHHHHhc
Confidence 99999 6765433334444444332221 111233455699999999999999999999999999754
No 177
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=99.97 E-value=3.7e-32 Score=297.06 Aligned_cols=205 Identities=16% Similarity=0.161 Sum_probs=153.1
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004987 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~gI 142 (720)
..+|..++.+++|||||++++ ++.... .+|+|||| .|++|.+++...+..+++.+++.++.||+.||.|||++||
T Consensus 93 ~~~E~~~l~~l~h~niv~~~~-~~~~~~---~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i 168 (373)
T 2qol_A 93 FLGEASIMGQFDHPNIIRLEG-VVTKSK---PVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY 168 (373)
T ss_dssp HHHHHHHHTTCCCTTBCCEEE-EECSSS---SCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhCCCCCCCeEEE-EEeeCC---ceEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 347888999999999999999 555443 57999999 7999999997766679999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004987 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.+||+|||++......... ..
T Consensus 169 vH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~-------------------------------~~------------ 205 (373)
T 2qol_A 169 VHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEA-------------------------------AY------------ 205 (373)
T ss_dssp CCSCCCGGGEEECTTCCEEECCC---------------------------------------------------------
T ss_pred eCCCCCcceEEEcCCCCEEECcCccccccccCCcc-------------------------------ce------------
Confidence 99999999999999999999998887433211000 00
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004987 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGvlL~ 302 (720)
......+|+.|+|||++.+..++.++|||||||++|
T Consensus 206 --------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ 241 (373)
T 2qol_A 206 --------------------------------------------TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLW 241 (373)
T ss_dssp ----------------------------------------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred --------------------------------------------eccCCCcCCCccChhhhccCCcCchhcHHHHHHHHH
Confidence 000024578899999999888999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004987 303 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~i~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
||++ ||...... .....+..+..++......+...+|+.+||+.||.+||++.++++
T Consensus 242 ellt~g~~P~~~~~~~-~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~ 302 (373)
T 2qol_A 242 EVMSYGERPYWEMSNQ-DVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS 302 (373)
T ss_dssp HHHTTC-CTTTTCCHH-HHHHHHHTTEECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHhCCCCCCCCCCHH-HHHHHHHcCCCCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHH
Confidence 9886 66554433 334444433222222223344559999999999999999999985
No 178
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=99.97 E-value=5.7e-32 Score=282.89 Aligned_cols=202 Identities=16% Similarity=0.207 Sum_probs=159.5
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004987 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~gIv 143 (720)
.+|..++.+++||||+++++ ++.... .+|+|||| .+++|.+++......+++.+++.++.||+.||.|||++||+
T Consensus 67 ~~E~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~ 142 (283)
T 3gen_A 67 IEEAKVMMNLSHEKLVQLYG-VCTKQR---PIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFL 142 (283)
T ss_dssp HHHHHHHHTCCCTTBCCEEE-EECSSS---SEEEEECCCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHhcCCCCCEeeEEE-EEecCC---CeEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 36788999999999999999 555443 57999999 79999999976555699999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004987 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.++|+|||.+.........
T Consensus 143 H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~---------------------------------------------- 176 (283)
T 3gen_A 143 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT---------------------------------------------- 176 (283)
T ss_dssp CSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHH----------------------------------------------
T ss_pred CCCCccceEEEcCCCCEEEccccccccccccccc----------------------------------------------
Confidence 9999999999999999999998887432111000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004987 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGvlL~e 303 (720)
......+|+.|+|||++.+..++.++|||||||++|+
T Consensus 177 -------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~ 213 (283)
T 3gen_A 177 -------------------------------------------SSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWE 213 (283)
T ss_dssp -------------------------------------------STTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHH
T ss_pred -------------------------------------------cccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHH
Confidence 0001346888999999998889999999999999999
Q ss_pred ccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004987 304 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 304 Llt----pf~~~~~~~~~~~~i~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|++ ||...... .....+.....+.......+...+|+.+||+.||.+|||+.++++
T Consensus 214 l~t~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~ 273 (283)
T 3gen_A 214 IYSLGKMPYERFTNS-ETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLS 273 (283)
T ss_dssp HHTTTCCTTTTSCHH-HHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred HHhCCCCCccccChh-HHHHHHhcccCCCCCCcCCHHHHHHHHHHccCChhHCcCHHHHHH
Confidence 997 66655443 334444443332222223345569999999999999999999996
No 179
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=99.97 E-value=5e-32 Score=281.26 Aligned_cols=199 Identities=16% Similarity=0.207 Sum_probs=152.4
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-
Q 004987 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG- 141 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~g- 141 (720)
..+|..++..++||||+++++ ++.... .+++|||| .|++|.+++.. ..+++..++.++.||+.||.|||++|
T Consensus 53 ~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~i~~~l~~~l~~lH~~~~ 126 (271)
T 3dtc_A 53 VRQEAKLFAMLKHPNIIALRG-VCLKEP---NLCLVMEFARGGPLNRVLSG--KRIPPDILVNWAVQIARGMNYLHDEAI 126 (271)
T ss_dssp HHHHHHHHHHCCCTTBCCEEE-EECCC-----CEEEEECCTTEEHHHHHTS--SCCCHHHHHHHHHHHHHHHHHHHHSSS
T ss_pred HHHHHHHHHhcCCCCEeeEEE-EEecCC---ceEEEEEcCCCCCHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhCCC
Confidence 336777899999999999999 555443 46999999 89999999853 34999999999999999999999999
Q ss_pred --ceeccCCCCcEEEcc--------CCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccc
Q 004987 142 --IVVHNVRPSCFVMSS--------FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQ 211 (720)
Q Consensus 142 --IvHrDLKP~NILl~~--------~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfg 211 (720)
|+||||||+|||++. ++.++|+|||.+.......
T Consensus 127 ~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~------------------------------------ 170 (271)
T 3dtc_A 127 VPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTT------------------------------------ 170 (271)
T ss_dssp SCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC--------------------------------------------
T ss_pred CceeecCCchHHEEEecccccccccCcceEEccCCccccccccc------------------------------------
Confidence 899999999999985 6778998888763221100
Q ss_pred cccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCcc
Q 004987 212 LVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCA 291 (720)
Q Consensus 212 la~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~ 291 (720)
.....||+.|+|||.+.+..++.+
T Consensus 171 --------------------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~ 194 (271)
T 3dtc_A 171 --------------------------------------------------------KMSAAGAYAWMAPEVIRASMFSKG 194 (271)
T ss_dssp -------------------------------------------------------------CCGGGSCHHHHHHCCCSHH
T ss_pred --------------------------------------------------------ccCCCCccceeCHHHhccCCCCch
Confidence 001367999999999998889999
Q ss_pred ccchhhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcC
Q 004987 292 SDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 292 sDIwSLGvlL~eLlt---pf~~~~~~~~~~~~i~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~h 361 (720)
+|||||||++|+|++ ||................ .+....... +...+|+.+||+.||.+|||+.|++++
T Consensus 195 ~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 267 (271)
T 3dtc_A 195 SDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNK-LALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQ 267 (271)
T ss_dssp HHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHTSC-CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred hhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhcCC-CCCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHH
Confidence 999999999999999 676655543333333333 333333333 445699999999999999999999863
No 180
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=99.97 E-value=7e-32 Score=290.77 Aligned_cols=223 Identities=14% Similarity=0.190 Sum_probs=151.8
Q ss_pred ehhhhcccCCCCC------ceecccceeecCCCCCcEEEEEecCCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHH
Q 004987 66 SDGVELTHGDHLR------NQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 66 ~e~~~L~~l~Hpn------IV~l~~~~~~~~~~~~~~~lV~E~~g~sL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~~LH 138 (720)
+|..++.++.|++ |+.+++ ++.... .+|+||||.+++|.+++.. ....+++.+++.++.||+.||.|||
T Consensus 65 ~E~~~l~~l~~~~~~~~~~~~~~~~-~~~~~~---~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH 140 (355)
T 2eu9_A 65 LEINVLKKIKEKDKENKFLCVLMSD-WFNFHG---HMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLH 140 (355)
T ss_dssp HHHHHHHHHHHHCTTSCSCBCCEEE-EEEETT---EEEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhcCCCCceeEEEeee-eeeeCC---eEEEEEeccCCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 5666777777666 788887 554443 6799999988888888844 3356999999999999999999999
Q ss_pred HcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCC
Q 004987 139 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~ 218 (720)
++||+||||||+|||+...+...+.+....... .......++++|||++.....
T Consensus 141 ~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~kl~Dfg~~~~~~~ 194 (355)
T 2eu9_A 141 ENQLTHTDLKPENILFVNSEFETLYNEHKSCEE--------------------------KSVKNTSIRVADFGSATFDHE 194 (355)
T ss_dssp TTTEECCCCCGGGEEESCCCEEEEECCC-CCCE--------------------------EEESCCCEEECCCTTCEETTS
T ss_pred HCCcccCCCCHHHEEEecccccccccccccccc--------------------------cccCCCcEEEeecCccccccc
Confidence 999999999999999954333222211110000 000001233344444331110
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhh
Q 004987 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
. .....||+.|+|||++.+..++.++||||||
T Consensus 195 ~------------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG 226 (355)
T 2eu9_A 195 H------------------------------------------------HTTIVATRHYRPPEVILELGWAQPCDVWSIG 226 (355)
T ss_dssp C------------------------------------------------CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHH
T ss_pred c------------------------------------------------ccCCcCCCcccCCeeeecCCCCCccchHHHH
Confidence 0 0114689999999999998999999999999
Q ss_pred hhhhhccc---cCCCCchHHH--HHHHhhcCCCCccccc-----------------------------------------
Q 004987 299 VLLFELFC---PFSTGEEKTR--TMSSLRHRVLPPQLLL----------------------------------------- 332 (720)
Q Consensus 299 vlL~eLlt---pf~~~~~~~~--~~~~i~~~~~p~~~~~----------------------------------------- 332 (720)
|++|||++ ||........ .+..+. +.+|..+..
T Consensus 227 ~il~el~~g~~pf~~~~~~~~~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (355)
T 2eu9_A 227 CILFEYYRGFTLFQTHENREHLVMMEKIL-GPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSL 305 (355)
T ss_dssp HHHHHHHHSSCSCCCSSHHHHHHHHHHHH-CCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSH
T ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHHHc-CCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccch
Confidence 99999999 6665443321 122221 222221100
Q ss_pred cCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004987 333 KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 333 ~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
..+...+||.+||++||.+|||+.|+|+||||+..
T Consensus 306 ~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~ 340 (355)
T 2eu9_A 306 EHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGL 340 (355)
T ss_dssp HHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGGC
T ss_pred hHHHHHHHHHHHhcCChhhCcCHHHHhcChhhcCC
Confidence 01234599999999999999999999999999986
No 181
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=99.97 E-value=1e-31 Score=286.62 Aligned_cols=215 Identities=12% Similarity=0.059 Sum_probs=153.8
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCC---CcEEEEEec-CCCCHHHHHhC-----CCCCCCHHHHHHHHHHHHHH
Q 004987 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAI---DPFVHAIEW-GDVSLRQWLDK-----PKRSVDVYECLHIFRQIVEI 133 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~---~~~~lV~E~-~g~sL~~~L~~-----~~~~l~~~~~~~i~~QIl~a 133 (720)
+..+|..++.+++||||+++++ ++...... ..++++||| .+++|.+++.. ....+++.+++.++.||+.|
T Consensus 71 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~a 149 (323)
T 3qup_A 71 EFLREAACMKEFDHPHVAKLVG-VSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACG 149 (323)
T ss_dssp HHHHHHHHHTTCCCTTBCCCCE-EEECC-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCceehhhc-eeeccccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHH
Confidence 3447888999999999999999 44333221 235899999 89999999932 12258999999999999999
Q ss_pred HHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccc
Q 004987 134 VYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLV 213 (720)
Q Consensus 134 L~~LHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla 213 (720)
|.|||++||+||||||+|||++.++.+||+|||.+.........
T Consensus 150 l~~LH~~~ivH~Dikp~NIli~~~~~~kl~Dfg~a~~~~~~~~~------------------------------------ 193 (323)
T 3qup_A 150 MEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYY------------------------------------ 193 (323)
T ss_dssp HHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC----------------------------------------------
T ss_pred HHHHHcCCcccCCCCcceEEEcCCCCEEEeeccccccccccccc------------------------------------
Confidence 99999999999999999999999999999999887432111000
Q ss_pred cCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCcccc
Q 004987 214 TAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASD 293 (720)
Q Consensus 214 ~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sD 293 (720)
.......+|+.|+|||++.+..++.++|
T Consensus 194 ----------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~D 221 (323)
T 3qup_A 194 ----------------------------------------------------RQGCASKLPVKWLALESLADNLYTVHSD 221 (323)
T ss_dssp -----------------------------------------------------------CCGGGCCHHHHHHCCCCHHHH
T ss_pred ----------------------------------------------------cccccccCcccccCchhhcCCCCCCccc
Confidence 0000134688999999999988999999
Q ss_pred chhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCC-------hHHHHcCc
Q 004987 294 IYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-------MGELLQSE 362 (720)
Q Consensus 294 IwSLGvlL~eLlt----pf~~~~~~~~~~~~i~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpt-------a~eiL~hp 362 (720)
||||||++|||++ ||...... .....+.....++......+...+|+.+||+.||.+||| ++++++||
T Consensus 222 i~slG~il~ell~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~ 300 (323)
T 3qup_A 222 VWAFGVTMWEIMTRGQTPYAGIENA-EIYNYLIGGNRLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHL 300 (323)
T ss_dssp HHHHHHHHHHHHTTSCCTTTTCCGG-GHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred hhhHHHHHHHHHhCCCCCccccChH-HHHHHHhcCCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 9999999999998 55544333 333334433333333334455569999999999999999 77778899
Q ss_pred ccCCC
Q 004987 363 FLNEP 367 (720)
Q Consensus 363 ~~~~~ 367 (720)
|+...
T Consensus 301 ~~~~~ 305 (323)
T 3qup_A 301 SVLST 305 (323)
T ss_dssp -----
T ss_pred hhcCC
Confidence 98875
No 182
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=99.97 E-value=1.3e-31 Score=282.02 Aligned_cols=209 Identities=14% Similarity=0.078 Sum_probs=160.3
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004987 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~g 141 (720)
+..+|..++.+++||||+++++ ++..... ..+++||| .+++|.+++......+++.+++.++.||+.||.|||++|
T Consensus 68 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~~--~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ 144 (298)
T 3pls_A 68 AFLREGLLMRGLNHPNVLALIG-IMLPPEG--LPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQK 144 (298)
T ss_dssp HHHHHHHHHHTCCCTTBCCCCE-EECCSSS--CCEEEECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCeeeEEE-EEecCCC--CcEEEEecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3347788999999999999999 5544332 34899999 899999999776677999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004987 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.++|+|||.+......... .
T Consensus 145 i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~---------------------------------~---------- 181 (298)
T 3pls_A 145 FVHRDLAARNCMLDESFTVKVADFGLARDILDREYY---------------------------------S---------- 181 (298)
T ss_dssp CCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGGG---------------------------------C----------
T ss_pred cccCCCCcceEEEcCCCcEEeCcCCCcccccCCccc---------------------------------c----------
Confidence 999999999999999999999999888443211000 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004987 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGvlL 301 (720)
........+|+.|+|||.+.+..++.++|||||||++
T Consensus 182 -------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 218 (298)
T 3pls_A 182 -------------------------------------------VQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLL 218 (298)
T ss_dssp -------------------------------------------SCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHH
T ss_pred -------------------------------------------cccCcCCCCCccccChhhhccCCCChhhchhhHHHHH
Confidence 0000113578999999999998999999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004987 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~i~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|+|++ |+............+.....++......+...+|+.+||+.||.+|||+.++++
T Consensus 219 ~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~ 280 (298)
T 3pls_A 219 WELLTRGAPPYRHIDPFDLTHFLAQGRRLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVG 280 (298)
T ss_dssp HHHHHTSCCTTTTSCGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHhhCCCCCCccCCHHHHHHHhhcCCCCCCCccchHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 99999 333332222334444443333332233344569999999999999999999986
No 183
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=99.97 E-value=2.6e-32 Score=296.93 Aligned_cols=212 Identities=9% Similarity=0.073 Sum_probs=155.2
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceec
Q 004987 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 145 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~gIvHr 145 (720)
.+...+..++||||+++++.+..........|+||||.|++|.+++......+++.+++.|+.||+.||.|||++||+||
T Consensus 97 ~e~~~~~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHr 176 (364)
T 3op5_A 97 QKWIRTRKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRFGSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHG 176 (364)
T ss_dssp HHHHHHTTCSCCCSCCEEEEEEEEETTEEEEEEEEECEEEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECC
T ss_pred HHHHHHhhccCCCCCeEEeeeeeccCCcceEEEEEeCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeEEe
Confidence 34456778999999999995554444344689999999999999997665679999999999999999999999999999
Q ss_pred cCCCCcEEEc--cCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004987 146 NVRPSCFVMS--SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 146 DLKP~NILl~--~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||+|||++ .++.+||+|||+++........ ..+
T Consensus 177 Dlkp~Nill~~~~~~~~kl~DFG~a~~~~~~~~~------------------------------~~~------------- 213 (364)
T 3op5_A 177 DIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVH------------------------------KAY------------- 213 (364)
T ss_dssp CCCGGGEEEESSCTTCEEECCCTTCEESSGGGCC------------------------------CCS-------------
T ss_pred cCCHHHEEEecCCCCeEEEEECCcceecccCCcc------------------------------ccc-------------
Confidence 9999999999 8899999999888543211000 000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004987 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGvlL~e 303 (720)
.........||+.|+|||++.+..++.++|||||||++||
T Consensus 214 ----------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~e 253 (364)
T 3op5_A 214 ----------------------------------------AADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQ 253 (364)
T ss_dssp ----------------------------------------SCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHH
T ss_pred ----------------------------------------ccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHH
Confidence 0000012468999999999999999999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhh---cCCCCccc-----ccc-CchHHHHHHHcCCCCCCCCCChHHHHc
Q 004987 304 LFC---PFSTGEEKTRTMSSLR---HRVLPPQL-----LLK-FPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~i~---~~~~p~~~-----~~~-~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|++ ||.............. ...++..+ ... .+...+|+.+||..||.+||++.+|++
T Consensus 254 l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~ 322 (364)
T 3op5_A 254 WLTGHLPWEDNLKDPKYVRDSKIRYRENIASLMDKCFPAANAPGEIAKYMETVKLLDYTEKPLYENLRD 322 (364)
T ss_dssp HHHSCCTTGGGTTCHHHHHHHHHHHHHCHHHHHHHHSCTTCCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred HHhCCCCccccccCHHHHHHHHHHhhhhHHHHHHHhcccccCHHHHHHHHHHHhcCCCCCCCCHHHHHH
Confidence 999 6653211111111110 00111100 022 234459999999999999999999885
No 184
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=99.97 E-value=9.5e-32 Score=283.36 Aligned_cols=208 Identities=15% Similarity=0.116 Sum_probs=158.0
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004987 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~g 141 (720)
+..+|..++.+++||||+++++.++..+. ..+++||| .+++|.+++......+++.+++.++.||+.||.|||++|
T Consensus 72 ~~~~E~~~l~~l~h~~iv~~~~~~~~~~~---~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~~ 148 (298)
T 3f66_A 72 QFLTEGIIMKDFSHPNVLSLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 148 (298)
T ss_dssp HHHHHHHHHHTCCCTTBCCCCEEECCSSS---CCEEEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCEeeeeeEEEcCCC---ceEEEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 34477889999999999999994344332 46899999 888999999776667999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004987 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||.+......... .
T Consensus 149 i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~-------------------------------~------------ 185 (298)
T 3f66_A 149 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYY-------------------------------S------------ 185 (298)
T ss_dssp CCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGGGC-------------------------------B------------
T ss_pred ccCCCCchheEEECCCCCEEECcccccccccccchh-------------------------------c------------
Confidence 999999999999999999999999887543211000 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004987 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGvlL 301 (720)
........||+.|+|||.+.+..++.++|||||||++
T Consensus 186 -------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 222 (298)
T 3f66_A 186 -------------------------------------------VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLL 222 (298)
T ss_dssp -------------------------------------------C-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred -------------------------------------------cccccCCCCCccccChHHhcCCCCChHHHHHHHHHHH
Confidence 0000113578999999999988899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004987 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~i~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|+|++ ||...... .....+.....+.......+...+|+.+||++||.+|||+.|+++
T Consensus 223 ~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~ 284 (298)
T 3f66_A 223 WELMTRGAPPYPDVNTF-DITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 284 (298)
T ss_dssp HHHHTTSCCSSTTSCTT-THHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHhCCCCCCccCCHH-HHHHHHhcCCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 99998 44443332 222223322222222222334559999999999999999999986
No 185
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=99.97 E-value=2.7e-32 Score=296.76 Aligned_cols=210 Identities=20% Similarity=0.253 Sum_probs=154.1
Q ss_pred ehhhhcccCC-----------CCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHH
Q 004987 66 SDGVELTHGD-----------HLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEI 133 (720)
Q Consensus 66 ~e~~~L~~l~-----------HpnIV~l~~~~~~~~~~~~~~~lV~E~~g~sL~~~L~~-~~~~l~~~~~~~i~~QIl~a 133 (720)
+|..++.++. ||||+++++.+...+.....++++|||.|++|.+++.. ....+++..++.++.||+.|
T Consensus 64 ~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~a 143 (373)
T 1q8y_A 64 DEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLG 143 (373)
T ss_dssp HHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhcccccchhccccchHHHHHHHhhccCCCCceEEEEEecCCCCHHHHHHHhhccCCcHHHHHHHHHHHHHH
Confidence 5666666665 89999999955544444557899999999999999954 34459999999999999999
Q ss_pred HHHHHHc-CceeccCCCCcEEEcc------CCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccc
Q 004987 134 VYAAHSQ-GIVVHNVRPSCFVMSS------FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLR 206 (720)
Q Consensus 134 L~~LHs~-gIvHrDLKP~NILl~~------~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~ 206 (720)
|.|||++ ||+||||||+|||++. .+.+||+|||++...+..
T Consensus 144 L~~lH~~~~ivH~Dikp~NIll~~~~~~~~~~~~kl~Dfg~a~~~~~~-------------------------------- 191 (373)
T 1q8y_A 144 LDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEH-------------------------------- 191 (373)
T ss_dssp HHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTBC--------------------------------
T ss_pred HHHHHhcCCEEecCCChHHeEEeccCCCcCcceEEEcccccccccCCC--------------------------------
Confidence 9999998 9999999999999953 336888777766321100
Q ss_pred ccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC
Q 004987 207 REDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA 286 (720)
Q Consensus 207 l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~ 286 (720)
.....||+.|+|||++.+.
T Consensus 192 -------------------------------------------------------------~~~~~~t~~y~aPE~~~~~ 210 (373)
T 1q8y_A 192 -------------------------------------------------------------YTNSIQTREYRSPEVLLGA 210 (373)
T ss_dssp -------------------------------------------------------------CCSCCSCGGGCCHHHHHTC
T ss_pred -------------------------------------------------------------CCCCCCCccccCcHHHhCC
Confidence 0113689999999999999
Q ss_pred CCCccccchhhhhhhhhccc---cCCCCch-----HHHHHHHhh--cCCCCccc--------------------------
Q 004987 287 PVSCASDIYRLGVLLFELFC---PFSTGEE-----KTRTMSSLR--HRVLPPQL-------------------------- 330 (720)
Q Consensus 287 ~~s~~sDIwSLGvlL~eLlt---pf~~~~~-----~~~~~~~i~--~~~~p~~~-------------------------- 330 (720)
.++.++|||||||++|||++ ||..... .......+. -+.+|+.+
T Consensus 211 ~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (373)
T 1q8y_A 211 PWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFW 290 (373)
T ss_dssp CCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBC
T ss_pred CCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhccccccccc
Confidence 99999999999999999999 5654321 011111111 01122110
Q ss_pred ------------ccc-CchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004987 331 ------------LLK-FPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 331 ------------~~~-~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
... .+...+||.+||++||.+|||+.|+|+||||+...
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~ 341 (373)
T 1q8y_A 291 PLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTL 341 (373)
T ss_dssp CHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTCT
T ss_pred chhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhhChhhhccc
Confidence 011 12334999999999999999999999999999863
No 186
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=99.97 E-value=4.9e-32 Score=284.09 Aligned_cols=195 Identities=17% Similarity=0.227 Sum_probs=152.0
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004987 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~gI 142 (720)
..+|..++.+++||||+++++ ++..+. ..++|||| .|++|.+++......+++..++.++.||+.||.|||++||
T Consensus 59 ~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~i 134 (289)
T 4fvq_A 59 FFEAASMMSKLSHKHLVLNYG-VCVCGD---ENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENTL 134 (289)
T ss_dssp HHHHHHHHHTSCCTTBCCEEE-EECCTT---CCEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhCCCCCEeEEEE-EEEeCC---CCEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhCCe
Confidence 346788999999999999999 555443 45899999 7899999997665569999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCc--------eEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccccccccccc
Q 004987 143 VVHNVRPSCFVMSSFNH--------VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVT 214 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~--------vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~ 214 (720)
+||||||+|||++.++. ++|+|||.+......
T Consensus 135 vH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg~~~~~~~~---------------------------------------- 174 (289)
T 4fvq_A 135 IHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPK---------------------------------------- 174 (289)
T ss_dssp CCCCCCGGGEEEEECCBGGGTBCCEEEECCCCSCTTTSCH----------------------------------------
T ss_pred ECCCcCcceEEEecCCcccccccceeeeccCcccccccCc----------------------------------------
Confidence 99999999999998877 777777665221000
Q ss_pred CCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-CCCCcccc
Q 004987 215 APTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASD 293 (720)
Q Consensus 215 ~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~~sD 293 (720)
....||+.|+|||++.+ ..++.++|
T Consensus 175 ------------------------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~~D 200 (289)
T 4fvq_A 175 ------------------------------------------------------DILQERIPWVPPECIENPKNLNLATD 200 (289)
T ss_dssp ------------------------------------------------------HHHHHTTTTSCHHHHHCGGGCCHHHH
T ss_pred ------------------------------------------------------cccCCcCcccCHHHhCCCCCCCchhH
Confidence 01357889999999988 56899999
Q ss_pred chhhhhhhhhccc----cCCCCchHHHHHHHhhc-CCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004987 294 IYRLGVLLFELFC----PFSTGEEKTRTMSSLRH-RVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 294 IwSLGvlL~eLlt----pf~~~~~~~~~~~~i~~-~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
||||||++|||++ ||...... ........ ..+++. ..+...+|+.+||++||.+|||+.++++
T Consensus 201 iwslG~il~el~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~---~~~~l~~li~~~l~~dp~~Rps~~~ll~ 268 (289)
T 4fvq_A 201 KWSFGTTLWEICSGGDKPLSALDSQ-RKLQFYEDRHQLPAP---KAAELANLINNCMDYEPDHRPSFRAIIR 268 (289)
T ss_dssp HHHHHHHHHHHHTTTCCTTTTSCHH-HHHHHHHTTCCCCCC---SSCTTHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCCccccchH-HHHHHhhccCCCCCC---CCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 9999999999999 33333322 22222222 222222 2345579999999999999999999997
No 187
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=99.97 E-value=5.4e-32 Score=282.54 Aligned_cols=208 Identities=22% Similarity=0.312 Sum_probs=163.4
Q ss_pred eeehhhhcccCCCCCceecccceeecC-------------CCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHH
Q 004987 64 KHSDGVELTHGDHLRNQGGLSGVCENE-------------AAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFR 128 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~-------------~~~~~~~lV~E~-~g~sL~~~L~~-~~~~l~~~~~~~i~~ 128 (720)
..+|..++.+++||||+++++ ++... .....+|+|||| .+++|.+++.. ....+++..++.++.
T Consensus 51 ~~~e~~~l~~l~h~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ 129 (284)
T 2a19_B 51 AEREVKALAKLDHVNIVHYNG-CWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFE 129 (284)
T ss_dssp GHHHHHHHHHCCCTTBCCEEE-EEEEEEEC---------CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCEEEEee-eEeccccCcccccccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHH
Confidence 346778999999999999999 44321 112347999999 88899999943 334699999999999
Q ss_pred HHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccccc
Q 004987 129 QIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRRE 208 (720)
Q Consensus 129 QIl~aL~~LHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~ 208 (720)
||+.||.|||++||+||||||+|||++.++.++|+|||.+.......
T Consensus 130 qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--------------------------------- 176 (284)
T 2a19_B 130 QITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDG--------------------------------- 176 (284)
T ss_dssp HHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEESSCCS---------------------------------
T ss_pred HHHHHHHHHHhCCeeeccCCHHHEEEcCCCCEEECcchhheeccccc---------------------------------
Confidence 99999999999999999999999999999999999888774321110
Q ss_pred ccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCC
Q 004987 209 DLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV 288 (720)
Q Consensus 209 Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~ 288 (720)
......||+.|+|||++.+..+
T Consensus 177 ----------------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~ 198 (284)
T 2a19_B 177 ----------------------------------------------------------KRTRSKGTLRYMSPEQISSQDY 198 (284)
T ss_dssp ----------------------------------------------------------CCCCCCSCCTTSCHHHHHCSCC
T ss_pred ----------------------------------------------------------cccccCCcccccChhhhccCCC
Confidence 0011368999999999999889
Q ss_pred CccccchhhhhhhhhccccCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCC
Q 004987 289 SCASDIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 366 (720)
Q Consensus 289 s~~sDIwSLGvlL~eLltpf~~~~~~~~~~~~i~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~ 366 (720)
+.++|||||||++|+|+++..+..........+....+++.+ .+...+||.+||+.||.+|||+.|++++.+.-.
T Consensus 199 ~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~ 273 (284)
T 2a19_B 199 GKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDGIISDIF---DKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWK 273 (284)
T ss_dssp CTHHHHHHHHHHHHHHHSCCSSHHHHHHHHHHHHTTCCCTTS---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHT
T ss_pred cchhhhHHHHHHHHHHHhcCCcchhHHHHHHHhhcccccccC---CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHh
Confidence 999999999999999999655544444445555555444332 234569999999999999999999999876443
No 188
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=99.97 E-value=1.1e-31 Score=287.79 Aligned_cols=210 Identities=15% Similarity=0.130 Sum_probs=161.0
Q ss_pred eeehhhhcccC-CCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004987 64 KHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lV~E~~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~gI 142 (720)
..+|..++.++ +||||+++++ ++..+. ..++||||.|++|.+++......+++.+++.++.||+.||.|||++||
T Consensus 51 ~~~E~~~l~~l~~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i 126 (330)
T 2izr_A 51 LHLEYRFYKQLGSGDGIPQVYY-FGPCGK---YNAMVLELLGPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNL 126 (330)
T ss_dssp HHHHHHHHHHHCSCTTSCCEEE-EEEETT---EEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHHhhCCCCCCEEEE-EEecCC---ccEEEEEeCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 34677788998 9999999999 555543 679999999999999996555669999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCc-----eEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCC
Q 004987 143 VVHNVRPSCFVMSSFNH-----VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~-----vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~ 217 (720)
+||||||+|||++.++. +||+|||++........... .
T Consensus 127 iHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~~~~~------------------------------~------- 169 (330)
T 2izr_A 127 IYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKH------------------------------I------- 169 (330)
T ss_dssp ECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTTTCCB------------------------------C-------
T ss_pred eccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCCCCcc------------------------------c-------
Confidence 99999999999998887 99998888754322110000 0
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhh
Q 004987 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRL 297 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSL 297 (720)
.........||+.|+|||++.+..++.++|||||
T Consensus 170 ----------------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~sl 203 (330)
T 2izr_A 170 ----------------------------------------------PYREHKSLTGTARYMSINTHLGKEQSRRDDLEAL 203 (330)
T ss_dssp ----------------------------------------------CCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHH
T ss_pred ----------------------------------------------cccccCCcCCCccccChHHHcCCCCCchhHHHHH
Confidence 0000112578999999999999999999999999
Q ss_pred hhhhhhccc---cCCCC--chHHHHHHHhhc---CCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004987 298 GVLLFELFC---PFSTG--EEKTRTMSSLRH---RVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 298 GvlL~eLlt---pf~~~--~~~~~~~~~i~~---~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
||++|||++ ||... ......+..+.. ...++.+...+|...+|+..||..||.+||++.+|++
T Consensus 204 G~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~~~li~~~l~~~p~~RP~~~~l~~ 274 (330)
T 2izr_A 204 GHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCENFPEMATYLRYVRRLDFFEKPDYDYLRK 274 (330)
T ss_dssp HHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHSCHHHHTTTCHHHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred HHHHHHHhcCCCCccccccccHHHHHHHHHhhhccCCHHHHhccChHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence 999999999 66653 222223333322 1222333445676779999999999999999999875
No 189
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=99.97 E-value=4.2e-32 Score=302.68 Aligned_cols=210 Identities=16% Similarity=0.250 Sum_probs=145.7
Q ss_pred eehhhhcccC-CCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCC------CCHHHHHHHHHHHHHHHHHH
Q 004987 65 HSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRS------VDVYECLHIFRQIVEIVYAA 137 (720)
Q Consensus 65 ~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lV~E~~g~sL~~~L~~~~~~------l~~~~~~~i~~QIl~aL~~L 137 (720)
.+|..+|.++ +|||||++++ ++.+.. .+|+||||.+++|.+++...... .++..++.++.||+.||.||
T Consensus 56 ~~E~~~l~~l~~HpnIv~~~~-~~~~~~---~~~lv~E~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~L 131 (434)
T 2rio_A 56 LMEIKLLTESDDHPNVIRYYC-SETTDR---FLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHL 131 (434)
T ss_dssp HHHHHHHHHHTTSTTBCCEEE-EEECSS---EEEEEECCCSEEHHHHHHTC------------CCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccCCCCcCeEEE-EEecCC---eEEEEEecCCCCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHH
Confidence 3677778765 8999999999 554443 67999999777999999554321 13335678999999999999
Q ss_pred HHcCceeccCCCCcEEEccCC-------------ceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhc
Q 004987 138 HSQGIVVHNVRPSCFVMSSFN-------------HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTR 204 (720)
Q Consensus 138 Hs~gIvHrDLKP~NILl~~~~-------------~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~ 204 (720)
|++||+||||||+|||++.++ .+||+|||++........
T Consensus 132 H~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG~a~~~~~~~~---------------------------- 183 (434)
T 2rio_A 132 HSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQS---------------------------- 183 (434)
T ss_dssp HHTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCTTCEECCC-------------------------------
T ss_pred HHCCccccCCChHhEEEecCcccccccccCCCceEEEEcccccceecCCCCc----------------------------
Confidence 999999999999999997543 688877777643211100
Q ss_pred ccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCcccc
Q 004987 205 LRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA 284 (720)
Q Consensus 205 ~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~ 284 (720)
.+ ........||+.|+|||++.
T Consensus 184 ----~~------------------------------------------------------~~~~~~~~gt~~y~aPE~~~ 205 (434)
T 2rio_A 184 ----SF------------------------------------------------------RTNLNNPSGTSGWRAPELLE 205 (434)
T ss_dssp ---------------------------------------------------------------------CCTTSCHHHHS
T ss_pred ----cc------------------------------------------------------eeeecCCCCCCCccCHHHhc
Confidence 00 00001247899999999997
Q ss_pred C-------CCCCccccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCC-cccc-----ccCchHHHHHHHcCCC
Q 004987 285 G-------APVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLP-PQLL-----LKFPKEASFCLWLLHP 347 (720)
Q Consensus 285 ~-------~~~s~~sDIwSLGvlL~eLlt----pf~~~~~~~~~~~~i~~~~~p-~~~~-----~~~p~~~~Li~~~L~~ 347 (720)
+ ..++.++|||||||++|||++ ||....... ..+...... +... ...+...+||.+||+.
T Consensus 206 ~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~---~~i~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~ 282 (434)
T 2rio_A 206 ESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE---SNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDH 282 (434)
T ss_dssp CCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH---HHHHHTCCCCCCCTTCCCHHHHHHHHHHHHHHTCS
T ss_pred cccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH---HHHhcCCCCcccccccccccchHHHHHHHHHHhhC
Confidence 6 558999999999999999998 554432222 112221111 1111 1113445999999999
Q ss_pred CCCCCCChHHHHcCcccCCC
Q 004987 348 EPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 348 dP~~Rpta~eiL~hp~~~~~ 367 (720)
||.+|||+.++|+||||...
T Consensus 283 dP~~Rps~~eil~hp~f~~~ 302 (434)
T 2rio_A 283 DPLKRPTAMKVLRHPLFWPK 302 (434)
T ss_dssp SGGGSCCHHHHHTSGGGSCH
T ss_pred ChhhCCCHHHHHhCCccCCc
Confidence 99999999999999999764
No 190
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=99.97 E-value=7e-32 Score=294.91 Aligned_cols=208 Identities=15% Similarity=0.124 Sum_probs=152.9
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004987 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~g 141 (720)
+..+|..++.+++|||||++++.++.... .+|+|||| .+++|.+++......+++.+++.++.||+.||.|||++|
T Consensus 136 ~~~~E~~il~~l~hpnIv~~~~~~~~~~~---~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ 212 (373)
T 3c1x_A 136 QFLTEGIIMKDFSHPNVLSLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK 212 (373)
T ss_dssp HHHHHHTTSTTCCCTTBCCCCEEECCCSS---CCEEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCcceEEEEEEcCCC---CeEEEEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 34478889999999999999994343332 46899999 889999999777667999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004987 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||+++........ .
T Consensus 213 ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~--------------------------------~----------- 249 (373)
T 3c1x_A 213 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFD--------------------------------S----------- 249 (373)
T ss_dssp CCCSCCCGGGEEECTTCCEEECCC--------------------------------------------------------
T ss_pred EecCccchheEEECCCCCEEEeeccccccccccccc--------------------------------c-----------
Confidence 999999999999999999999999887443111000 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004987 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGvlL 301 (720)
........+|+.|+|||++.+..++.++|||||||++
T Consensus 250 -------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il 286 (373)
T 3c1x_A 250 -------------------------------------------VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLL 286 (373)
T ss_dssp ---------------------------------------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred -------------------------------------------ccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHH
Confidence 0000113568899999999988899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004987 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~i~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||...... .....+..+..+.......+...+|+.+||+.||.+|||+.|+++
T Consensus 287 ~ellt~~~~p~~~~~~~-~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~ 348 (373)
T 3c1x_A 287 WELMTRGAPPYPDVNTF-DITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 348 (373)
T ss_dssp HHHHTTSCCSCTTSCSS-CHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHhCcCCCCCCCCHH-HHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 99998 45443322 222233333222222222344559999999999999999999986
No 191
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=99.97 E-value=7.8e-32 Score=286.18 Aligned_cols=198 Identities=18% Similarity=0.244 Sum_probs=152.3
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCC--CCCHHHHHHHHHHHHHHHHHHHH-
Q 004987 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKR--SVDVYECLHIFRQIVEIVYAAHS- 139 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~--~l~~~~~~~i~~QIl~aL~~LHs- 139 (720)
..+|..+|.+++||||+++++ ++.+ ..++|||| .|++|.+++..... .+++..++.++.||+.||.|||+
T Consensus 48 ~~~E~~~l~~l~hp~iv~~~~-~~~~-----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~ 121 (307)
T 2eva_A 48 FIVELRQLSRVNHPNIVKLYG-ACLN-----PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSM 121 (307)
T ss_dssp HHHHHHHHHHCCCTTBCCEEE-BCTT-----TTEEEEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHhcCCCCCcCeEEE-EEcC-----CcEEEEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhC
Confidence 346788999999999999999 4442 35899999 89999999965432 47899999999999999999999
Q ss_pred --cCceeccCCCCcEEEccCCc-eEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCC
Q 004987 140 --QGIVVHNVRPSCFVMSSFNH-VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 216 (720)
Q Consensus 140 --~gIvHrDLKP~NILl~~~~~-vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~ 216 (720)
+||+||||||+|||++.++. +||+|||.+......
T Consensus 122 ~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~------------------------------------------ 159 (307)
T 2eva_A 122 QPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH------------------------------------------ 159 (307)
T ss_dssp SSSCCCCCCCSGGGEEEETTTTEEEECCCCC-------------------------------------------------
T ss_pred CCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc------------------------------------------
Confidence 89999999999999998886 799888876321100
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchh
Q 004987 217 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYR 296 (720)
Q Consensus 217 ~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwS 296 (720)
.....||+.|+|||++.+..++.++||||
T Consensus 160 ---------------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~Di~s 188 (307)
T 2eva_A 160 ---------------------------------------------------MTNNKGSAAWMAPEVFEGSNYSEKCDVFS 188 (307)
T ss_dssp --------------------------------------------------------CCTTSSCHHHHTCCCCCTHHHHHH
T ss_pred ---------------------------------------------------cccCCCCCceEChhhhCCCCCCcHHHHHH
Confidence 00135799999999999988999999999
Q ss_pred hhhhhhhccc---cCCCCc-hHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004987 297 LGVLLFELFC---PFSTGE-EKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 297 LGvlL~eLlt---pf~~~~-~~~~~~~~i~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++|||++ ||.... .....+..+.....++......+...+|+.+||+.||.+|||+.++++
T Consensus 189 lG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 256 (307)
T 2eva_A 189 WGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVK 256 (307)
T ss_dssp HHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTCCCCCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHHHCCCCchhhCccHHHHHHHHhcCCCCCcccccCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 9999999999 665432 222333334444444433333345569999999999999999999986
No 192
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.97 E-value=1.5e-31 Score=280.58 Aligned_cols=206 Identities=13% Similarity=0.110 Sum_probs=161.7
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004987 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~g 141 (720)
+..+|..++.+++||||+++++ ++..+ .+++|||| .+++|.+++......+++..++.++.||+.||.|||++|
T Consensus 56 ~~~~E~~~l~~l~h~~i~~~~~-~~~~~----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ 130 (287)
T 1u59_A 56 EMMREAQIMHQLDNPYIVRLIG-VCQAE----ALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN 130 (287)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EEESS----SEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCEeEEEE-EecCC----CcEEEEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3447888999999999999999 55433 47999999 889999999666666999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004987 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.++|+|||.+...+..... .
T Consensus 131 i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~--------------------------------~----------- 167 (287)
T 1u59_A 131 FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSY--------------------------------Y----------- 167 (287)
T ss_dssp EECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCE--------------------------------E-----------
T ss_pred EeeCCCchheEEEcCCCCEEECcccceeeeccCcce--------------------------------e-----------
Confidence 999999999999999999999999887543221000 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004987 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGvlL 301 (720)
.......||+.|+|||++.+..++.++|||||||++
T Consensus 168 --------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 203 (287)
T 1u59_A 168 --------------------------------------------TARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTM 203 (287)
T ss_dssp --------------------------------------------CCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHH
T ss_pred --------------------------------------------eccccccccccccCHHHhccCCCCchhhHHHHHHHH
Confidence 000013568999999999888899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004987 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~i~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~h 361 (720)
|||++ ||...... ..+..+..+..++......+...+||.+||..||.+||++.+++++
T Consensus 204 ~ellt~g~~p~~~~~~~-~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~ 266 (287)
T 1u59_A 204 WEALSYGQKPYKKMKGP-EVMAFIEQGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQR 266 (287)
T ss_dssp HHHHTTSCCTTTTCCTH-HHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred HHHHcCCCCCcccCCHH-HHHHHHhcCCcCCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 99997 56554433 3444444443333333334455699999999999999999999974
No 193
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=99.97 E-value=2.7e-31 Score=283.81 Aligned_cols=208 Identities=14% Similarity=0.102 Sum_probs=154.5
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC---CCCCCHHHHHHHHHHHHHHHHHHH
Q 004987 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---KRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~---~~~l~~~~~~~i~~QIl~aL~~LH 138 (720)
+..+|..++..++||||+++++ ++.... ..++|||| .+++|.+++... ...+++..++.++.||+.||.|||
T Consensus 73 ~~~~e~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH 148 (326)
T 3uim_A 73 QFQTEVEMISMAVHRNLLRLRG-FCMTPT---ERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLH 148 (326)
T ss_dssp HHHHHHHGGGTCCCTTBCCCCE-EECCSS---CCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCCccceEE-EEecCC---ceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 4457788999999999999999 555543 45899999 899999999543 334899999999999999999999
Q ss_pred Hc---CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccC
Q 004987 139 SQ---GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 215 (720)
Q Consensus 139 s~---gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~ 215 (720)
++ ||+||||||+|||++.++.++|+|||++.........
T Consensus 149 ~~~~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-------------------------------------- 190 (326)
T 3uim_A 149 DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH-------------------------------------- 190 (326)
T ss_dssp HSSSSCEECCCCSGGGEEECTTCCEEECCCSSCEECCSSSSC--------------------------------------
T ss_pred hCCCCCeEeCCCchhhEEECCCCCEEeccCccccccCccccc--------------------------------------
Confidence 99 9999999999999999999999988887432111000
Q ss_pred CCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccch
Q 004987 216 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIY 295 (720)
Q Consensus 216 ~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIw 295 (720)
......||+.|+|||++.+..++.++|||
T Consensus 191 ---------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~ 219 (326)
T 3uim_A 191 ---------------------------------------------------VTTAVRGTIGHIAPEYLSTGKSSEKTDVF 219 (326)
T ss_dssp ---------------------------------------------------EECCCCSCGGGCCHHHHHHSEECHHHHHH
T ss_pred ---------------------------------------------------ccccccCCcCccCHHHhccCCCCccccch
Confidence 00113589999999999888899999999
Q ss_pred hhhhhhhhccccCCCCchH----------HHHHHHh-hcCC----CCcccccc-----CchHHHHHHHcCCCCCCCCCCh
Q 004987 296 RLGVLLFELFCPFSTGEEK----------TRTMSSL-RHRV----LPPQLLLK-----FPKEASFCLWLLHPEPSGRPKM 355 (720)
Q Consensus 296 SLGvlL~eLltpf~~~~~~----------~~~~~~i-~~~~----~p~~~~~~-----~p~~~~Li~~~L~~dP~~Rpta 355 (720)
||||++|+|+++..+.... ....... .... ........ .+...+|+.+||+.||.+|||+
T Consensus 220 slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~ 299 (326)
T 3uim_A 220 GYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKM 299 (326)
T ss_dssp HHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCH
T ss_pred hHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCH
Confidence 9999999999933222110 0111111 1111 01111111 1234599999999999999999
Q ss_pred HHHHcCcc
Q 004987 356 GELLQSEF 363 (720)
Q Consensus 356 ~eiL~hp~ 363 (720)
.|+++|-.
T Consensus 300 ~ell~~L~ 307 (326)
T 3uim_A 300 SEVVRMLE 307 (326)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhc
Confidence 99998654
No 194
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=99.97 E-value=9.1e-32 Score=301.33 Aligned_cols=200 Identities=16% Similarity=0.131 Sum_probs=156.0
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004987 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~-~~l~~~~~~~i~~QIl~aL~~LHs~g 141 (720)
..+|..+|.+++|||||++++.+.... ..+|+|||| .+++|.+++...+ ..+++..++.++.||+.||.|||++|
T Consensus 233 ~~~E~~~l~~l~h~niv~~~~~~~~~~---~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ 309 (450)
T 1k9a_A 233 FLAEASVMTQLRHSNLVQLLGVIVEEK---GGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN 309 (450)
T ss_dssp HHHHHHHHHTCCCTTBCCEEEEEECTT---SCEEEEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhccCCCEEEEEEEEEcCC---CceEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 346788999999999999999444332 257999999 8999999995443 33799999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004987 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||+++.....
T Consensus 310 ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~----------------------------------------------- 342 (450)
T 1k9a_A 310 FVHRDLAARNVLVSEDNVAKVSDFGLTKEASST----------------------------------------------- 342 (450)
T ss_dssp EECSCCCGGGEEECTTSCEEECCCTTCEECC-------------------------------------------------
T ss_pred eeCCCCCHhhEEECCCCCEEEeeCCCccccccc-----------------------------------------------
Confidence 999999999999999999999888877321100
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004987 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGvlL 301 (720)
.....+++.|+|||++.+..++.++|||||||++
T Consensus 343 ----------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l 376 (450)
T 1k9a_A 343 ----------------------------------------------QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILL 376 (450)
T ss_dssp --------------------------------------------------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHH
T ss_pred ----------------------------------------------ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHH
Confidence 0002457889999999999999999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004987 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~i~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||...... .....+..+..++......+...+||.+||+.||.+|||+.++++
T Consensus 377 ~el~t~g~~P~~~~~~~-~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~ 438 (450)
T 1k9a_A 377 WEIYSFGRVPYPRIPLK-DVVPRVEKGYKMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLRE 438 (450)
T ss_dssp HHHHTTTCCSSTTSCTT-THHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHhCCCCCCCCCCHH-HHHHHHHcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 99997 66654332 233344444333322233344559999999999999999999985
No 195
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=99.97 E-value=5.4e-32 Score=289.48 Aligned_cols=203 Identities=16% Similarity=0.153 Sum_probs=138.8
Q ss_pred hcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhC----CCCCCCHHHHHHHHHHHHHHHHHHHHc-Ccee
Q 004987 70 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK----PKRSVDVYECLHIFRQIVEIVYAAHSQ-GIVV 144 (720)
Q Consensus 70 ~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~~g~sL~~~L~~----~~~~l~~~~~~~i~~QIl~aL~~LHs~-gIvH 144 (720)
++..++||||+++++ ++.... .+++||||..++|.+++.. ....+++..+..++.||+.||.|||++ ||+|
T Consensus 74 ~~~~~~h~niv~~~~-~~~~~~---~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH 149 (327)
T 3aln_A 74 VMRSSDCPYIVQFYG-ALFREG---DCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIH 149 (327)
T ss_dssp HHSSCCCTTBCCEEE-EEECSS---EEEEEECCCSEEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCC
T ss_pred HHHcCCCCcEeeeee-EEEeCC---ceEEEEeecCCChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeE
Confidence 677899999999999 554443 5799999966799888842 245699999999999999999999999 9999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004987 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+|||++.++.+||+|||.+.......
T Consensus 150 ~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~------------------------------------------------- 180 (327)
T 3aln_A 150 RDIKPSNILLDRSGNIKLCDFGISGQLVDSI------------------------------------------------- 180 (327)
T ss_dssp SCCCGGGEEEETTTEEEECCCSSSCC------------------------------------------------------
T ss_pred CCCCHHHEEEcCCCCEEEccCCCceeccccc-------------------------------------------------
Confidence 9999999999999999999888874321110
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccc----cCCCCCccccchhhhhh
Q 004987 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEEL----AGAPVSCASDIYRLGVL 300 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l----~~~~~s~~sDIwSLGvl 300 (720)
......||+.|+|||++ .+..++.++|||||||+
T Consensus 181 ------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~i 218 (327)
T 3aln_A 181 ------------------------------------------AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGIT 218 (327)
T ss_dssp -------------------------------------------------------------------CCSHHHHHHHHHH
T ss_pred ------------------------------------------ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHH
Confidence 00013689999999999 45568999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCc---cccc-cCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004987 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPP---QLLL-KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 301 L~eLlt---pf~~~~~~~~~~~~i~~~~~p~---~~~~-~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
+|+|++ ||.........+..+..+..+. .... ..+...+|+.+||+.||.+|||+.++++||||...
T Consensus 219 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~~ 292 (327)
T 3aln_A 219 LYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFILMY 292 (327)
T ss_dssp HHHHHHSCCCSSCC-------CCCCCSCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred HHHHHHCCCCCCCcchHHHHHHHHhcCCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhChHHHHh
Confidence 999999 6655433222222222222211 1112 33455699999999999999999999999999764
No 196
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=99.97 E-value=1.5e-31 Score=283.64 Aligned_cols=205 Identities=16% Similarity=0.177 Sum_probs=158.7
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC-----------------------CCC
Q 004987 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-----------------------RSV 118 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~-----------------------~~l 118 (720)
+..+|..+|.+++||||+++++ ++.... .+++|||| .|++|.+++.... ..+
T Consensus 72 ~~~~E~~~l~~l~hp~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (314)
T 2ivs_A 72 DLLSEFNVLKQVNHPHVIKLYG-ACSQDG---PLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERAL 147 (314)
T ss_dssp HHHHHHHHHTTCCCTTBCCEEE-EECSSS---SCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEE
T ss_pred HHHHHHHHHhhCCCCceeeEEE-EEecCC---ceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCc
Confidence 3347888999999999999999 554443 46999999 8899999995432 238
Q ss_pred CHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhh
Q 004987 119 DVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDM 198 (720)
Q Consensus 119 ~~~~~~~i~~QIl~aL~~LHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~ 198 (720)
++.+++.++.||+.||.|||++||+||||||+|||++.++.++|+|||.+.........
T Consensus 148 ~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~--------------------- 206 (314)
T 2ivs_A 148 TMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSY--------------------- 206 (314)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTEEEECCCTTCEECTTTSCE---------------------
T ss_pred CHHHHHHHHHHHHHHHHHHHHCCCcccccchheEEEcCCCCEEEccccccccccccccc---------------------
Confidence 99999999999999999999999999999999999999999999998887433211000
Q ss_pred HhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCccc
Q 004987 199 LQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYA 278 (720)
Q Consensus 199 ~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~ 278 (720)
.......+|+.|+
T Consensus 207 -------------------------------------------------------------------~~~~~~~~~~~y~ 219 (314)
T 2ivs_A 207 -------------------------------------------------------------------VKRSQGRIPVKWM 219 (314)
T ss_dssp -------------------------------------------------------------------ECSSCCCSCGGGC
T ss_pred -------------------------------------------------------------------eeccCCCCccccc
Confidence 0000135688999
Q ss_pred CCccccCCCCCccccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCC
Q 004987 279 SPEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK 354 (720)
Q Consensus 279 APE~l~~~~~s~~sDIwSLGvlL~eLlt----pf~~~~~~~~~~~~i~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpt 354 (720)
|||++.+..++.++|||||||++|||++ ||...... .....+.....++......+...+|+.+||+.||.+||+
T Consensus 220 aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps 298 (314)
T 2ivs_A 220 AIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPE-RLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPV 298 (314)
T ss_dssp CHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG-GHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred ChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-HHHHHhhcCCcCCCCccCCHHHHHHHHHHccCChhhCcC
Confidence 9999998889999999999999999998 55544332 333444444333333333445569999999999999999
Q ss_pred hHHHHc
Q 004987 355 MGELLQ 360 (720)
Q Consensus 355 a~eiL~ 360 (720)
+.++++
T Consensus 299 ~~~l~~ 304 (314)
T 2ivs_A 299 FADISK 304 (314)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999986
No 197
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=99.97 E-value=9.2e-32 Score=281.21 Aligned_cols=203 Identities=21% Similarity=0.194 Sum_probs=156.9
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004987 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~g 141 (720)
+..+|..++.+++||||+++++ ++..+ ..|++||| .+++|.+++......+++..++.++.||+.||.|||++|
T Consensus 59 ~~~~E~~~l~~l~h~~i~~~~~-~~~~~----~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ 133 (281)
T 3cc6_A 59 KFMSEAVIMKNLDHPHIVKLIG-IIEEE----PTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESIN 133 (281)
T ss_dssp HHHHHHHHHHHHCCTTBCCEEE-EECSS----SCEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCcceEEE-EEcCC----CCEEEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3446888999999999999999 55443 35899999 889999999665556999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004987 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.++|+|||.+.........
T Consensus 134 i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-------------------------------------------- 169 (281)
T 3cc6_A 134 CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYY-------------------------------------------- 169 (281)
T ss_dssp CCCCCCSGGGEEEEETTEEEECCCCGGGCC--------------------------------------------------
T ss_pred cccCCCccceEEECCCCcEEeCccCCCccccccccc--------------------------------------------
Confidence 999999999999999999999998887433211000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004987 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGvlL 301 (720)
......+|+.|+|||++.+..++.++|||||||++
T Consensus 170 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 204 (281)
T 3cc6_A 170 ---------------------------------------------KASVTRLPIKWMSPESINFRRFTTASDVWMFAVCM 204 (281)
T ss_dssp ------------------------------------------------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred ---------------------------------------------ccccCCCCcceeCchhhccCCCCchhccHHHHHHH
Confidence 00013568899999999888899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004987 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~i~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||...... .....+.....++......+...+|+.+||+.||.+||++.|+++
T Consensus 205 ~~llt~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~ 266 (281)
T 3cc6_A 205 WEILSFGKQPFFWLENK-DVIGVLEKGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVC 266 (281)
T ss_dssp HHHHTTTCCTTTTSCGG-GHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHhCCCCCcccCChH-HHHHHHhcCCCCCCCCCCCHHHHHHHHHHccCCchhCcCHHHHHH
Confidence 99997 55443332 223333333333322233345569999999999999999999986
No 198
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=99.97 E-value=4.5e-32 Score=285.88 Aligned_cols=210 Identities=14% Similarity=0.132 Sum_probs=151.5
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH---
Q 004987 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAH--- 138 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LH--- 138 (720)
..+.+...+..++||||+++++.+.........+|+|||| .+++|.++++.. .+++..++.++.||+.||.|||
T Consensus 48 ~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~ 125 (301)
T 3q4u_A 48 FRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLT--TLDTVSCLRIVLSIASGLAHLHIEI 125 (301)
T ss_dssp HHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEEECCCTTCBHHHHHTTC--CBCHHHHHHHHHHHHHHHHHHHSCB
T ss_pred HHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEehhhccCCCHHHHHhhc--ccCHHHHHHHHHHHHHHHHHHHHhh
Confidence 3345555555589999999999555444444568999999 889999999543 4999999999999999999999
Q ss_pred -----HcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccc
Q 004987 139 -----SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLV 213 (720)
Q Consensus 139 -----s~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla 213 (720)
++||+||||||+|||++.++.+||+|||++......... .
T Consensus 126 ~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~--------------------------------~--- 170 (301)
T 3q4u_A 126 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQ--------------------------------L--- 170 (301)
T ss_dssp CSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTE--------------------------------E---
T ss_pred hhccCCCCeecCCCChHhEEEcCCCCEEEeeCCCeeeccccccc--------------------------------c---
Confidence 999999999999999999999999988887432111000 0
Q ss_pred cCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC------C
Q 004987 214 TAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA------P 287 (720)
Q Consensus 214 ~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~------~ 287 (720)
........||+.|+|||++.+. .
T Consensus 171 ---------------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~ 199 (301)
T 3q4u_A 171 ---------------------------------------------------DVGNNPRVGTKRYMAPEVLDETIQVDCFD 199 (301)
T ss_dssp ---------------------------------------------------ECCCCCCCCCGGGCCHHHHTTCCCTTCHH
T ss_pred ---------------------------------------------------cccccccccccceeChhhhcCcCCCCccc
Confidence 0000114789999999999877 4
Q ss_pred CCccccchhhhhhhhhcccc-------------CCCC----chHHHHHHHhhcCCCCccccc------cCchHHHHHHHc
Q 004987 288 VSCASDIYRLGVLLFELFCP-------------FSTG----EEKTRTMSSLRHRVLPPQLLL------KFPKEASFCLWL 344 (720)
Q Consensus 288 ~s~~sDIwSLGvlL~eLltp-------------f~~~----~~~~~~~~~i~~~~~p~~~~~------~~p~~~~Li~~~ 344 (720)
++.++|||||||++|||+++ |... .........+......+.+.. ..+...+|+.+|
T Consensus 200 ~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 279 (301)
T 3q4u_A 200 SYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKEC 279 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHH
T ss_pred CCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCCcchhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHH
Confidence 56799999999999999974 3221 111222222222222222211 113345999999
Q ss_pred CCCCCCCCCChHHHHc
Q 004987 345 LHPEPSGRPKMGELLQ 360 (720)
Q Consensus 345 L~~dP~~Rpta~eiL~ 360 (720)
|+.||.+|||+.++++
T Consensus 280 l~~dP~~Rps~~~i~~ 295 (301)
T 3q4u_A 280 WYQNPSARLTALRIKK 295 (301)
T ss_dssp CCSSGGGSCCHHHHHH
T ss_pred hhcChhhCCCHHHHHH
Confidence 9999999999999986
No 199
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=99.97 E-value=1.3e-31 Score=283.83 Aligned_cols=205 Identities=15% Similarity=0.177 Sum_probs=158.6
Q ss_pred eeehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCC-----------------CCCHHHHH
Q 004987 64 KHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKR-----------------SVDVYECL 124 (720)
Q Consensus 64 ~~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~-----------------~l~~~~~~ 124 (720)
..+|..++.++ +||||+++++ ++..+. .+++|||| .+++|.+++..... .+++.+++
T Consensus 73 ~~~E~~~l~~l~~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (313)
T 1t46_A 73 LMSELKVLSYLGNHMNIVNLLG-ACTIGG---PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 148 (313)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EECSSS---SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHH
T ss_pred HHHHHHHHhhcccCCCeeeEEE-EEecCC---CcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHH
Confidence 34777889998 9999999999 555543 46999999 88999999954332 48999999
Q ss_pred HHHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhc
Q 004987 125 HIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTR 204 (720)
Q Consensus 125 ~i~~QIl~aL~~LHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~ 204 (720)
.++.||+.||.|||++||+||||||+|||++.++.+||+|||.+........
T Consensus 149 ~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~---------------------------- 200 (313)
T 1t46_A 149 SFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSN---------------------------- 200 (313)
T ss_dssp HHHHHHHHHHHHHHHTTCCCSCCSGGGEEEETTTEEEECCCGGGSCTTSCTT----------------------------
T ss_pred HHHHHHHHHHHHHHHCCeecCCCccceEEEcCCCCEEEcccccccccccccc----------------------------
Confidence 9999999999999999999999999999999999999998888744322100
Q ss_pred ccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCcccc
Q 004987 205 LRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA 284 (720)
Q Consensus 205 ~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~ 284 (720)
+ .......||+.|+|||++.
T Consensus 201 -----~-------------------------------------------------------~~~~~~~~~~~y~aPE~~~ 220 (313)
T 1t46_A 201 -----Y-------------------------------------------------------VVKGNARLPVKWMAPESIF 220 (313)
T ss_dssp -----S-------------------------------------------------------EECSSSEECGGGCCHHHHH
T ss_pred -----c-------------------------------------------------------eeccCCCCcceeeChHHhc
Confidence 0 0000135688999999998
Q ss_pred CCCCCccccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004987 285 GAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 285 ~~~~s~~sDIwSLGvlL~eLlt----pf~~~~~~~~~~~~i~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
+..++.++|||||||++|||++ ||............+.....+.......+...+|+.+||++||.+|||+.|+++
T Consensus 221 ~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 300 (313)
T 1t46_A 221 NCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 300 (313)
T ss_dssp HCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhHHHHHhccCCCCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 8889999999999999999997 565544333334444433332222223345569999999999999999999986
No 200
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=99.97 E-value=1.3e-31 Score=287.88 Aligned_cols=205 Identities=15% Similarity=0.130 Sum_probs=159.5
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC-----------------------CCC
Q 004987 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-----------------------RSV 118 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~-----------------------~~l 118 (720)
+..+|..++.+++||||+++++ ++.... .+|+|||| .+++|.+++.... ..+
T Consensus 96 ~~~~E~~~l~~l~hp~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 171 (343)
T 1luf_A 96 DFQREAALMAEFDNPNIVKLLG-VCAVGK---PMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPL 171 (343)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEE-EECSSS---SCEEEEECCTTCBHHHHHHHTCC----------------------CCC
T ss_pred HHHHHHHHHHhCCCCCEEEEEE-EEccCC---ceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCC
Confidence 3447888999999999999999 555443 57999999 8899999995421 459
Q ss_pred CHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhh
Q 004987 119 DVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDM 198 (720)
Q Consensus 119 ~~~~~~~i~~QIl~aL~~LHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~ 198 (720)
++.+++.++.||+.||.|||++||+||||||+|||++.++.+||+|||.+......
T Consensus 172 ~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~------------------------ 227 (343)
T 1luf_A 172 SCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSA------------------------ 227 (343)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGG------------------------
T ss_pred CHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEECCCCeEEEeecCCCcccccC------------------------
Confidence 99999999999999999999999999999999999999999999998887322110
Q ss_pred HhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCccc
Q 004987 199 LQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYA 278 (720)
Q Consensus 199 ~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~ 278 (720)
+. ........||+.|+
T Consensus 228 ----------~~------------------------------------------------------~~~~~~~~~t~~y~ 243 (343)
T 1luf_A 228 ----------DY------------------------------------------------------YKADGNDAIPIRWM 243 (343)
T ss_dssp ----------GC------------------------------------------------------BC----CCBCGGGC
T ss_pred ----------cc------------------------------------------------------ccccCCCcccceec
Confidence 00 00001135789999
Q ss_pred CCccccCCCCCccccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCC
Q 004987 279 SPEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK 354 (720)
Q Consensus 279 APE~l~~~~~s~~sDIwSLGvlL~eLlt----pf~~~~~~~~~~~~i~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpt 354 (720)
|||++.+..++.++|||||||++|||++ ||...... .....+..+..++......+...+|+.+||+.||.+||+
T Consensus 244 aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps 322 (343)
T 1luf_A 244 PPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHE-EVIYYVRDGNILACPENCPLELYNLMRLCWSKLPADRPS 322 (343)
T ss_dssp CHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH-HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred ChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCChH-HHHHHHhCCCcCCCCCCCCHHHHHHHHHHcccCcccCCC
Confidence 9999998889999999999999999998 56554433 344444444443322233345569999999999999999
Q ss_pred hHHHHc
Q 004987 355 MGELLQ 360 (720)
Q Consensus 355 a~eiL~ 360 (720)
+.++++
T Consensus 323 ~~~~~~ 328 (343)
T 1luf_A 323 FCSIHR 328 (343)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999986
No 201
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=99.97 E-value=2.2e-31 Score=284.43 Aligned_cols=206 Identities=17% Similarity=0.218 Sum_probs=157.8
Q ss_pred eeeehhhhcccCC--CCCceecccceeecCCCCCcEEEEEec-CC-CCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 004987 63 RKHSDGVELTHGD--HLRNQGGLSGVCENEAAIDPFVHAIEW-GD-VSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 63 r~~~e~~~L~~l~--HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g-~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LH 138 (720)
+..+|..++.++. ||||+++++ ++.... .++++||+ .+ ++|.+++... ..+++..++.++.||+.||.|||
T Consensus 92 ~~~~E~~~l~~l~~~~~~i~~~~~-~~~~~~---~~~lv~e~~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~~L~~LH 166 (320)
T 3a99_A 92 RVPMEVVLLKKVSSGFSGVIRLLD-WFERPD---SFVLILERPEPVQDLFDFITER-GALQEELARSFFWQVLEAVRHCH 166 (320)
T ss_dssp EEEHHHHHHHHHCSSSCSBCCEEE-EEECSS---EEEEEEECCSSEEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhccCCCCceEEEE-EEecCC---cEEEEEEcCCCCccHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHH
Confidence 4456777888886 599999999 555443 57999999 44 8999999553 34999999999999999999999
Q ss_pred HcCceeccCCCCcEEEc-cCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCC
Q 004987 139 SQGIVVHNVRPSCFVMS-SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~-~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~ 217 (720)
++||+||||||+|||++ .++.+||+|||.+.......
T Consensus 167 ~~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~~~~~~~------------------------------------------ 204 (320)
T 3a99_A 167 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV------------------------------------------ 204 (320)
T ss_dssp HTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCSSC------------------------------------------
T ss_pred HCCcEeCCCCHHHEEEeCCCCCEEEeeCcccccccccc------------------------------------------
Confidence 99999999999999999 77899998888773321100
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCC-Cccccchh
Q 004987 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYR 296 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~-s~~sDIwS 296 (720)
.....||+.|+|||++.+..+ +.++||||
T Consensus 205 --------------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~~Di~s 234 (320)
T 3a99_A 205 --------------------------------------------------YTDFDGTRVYSPPEWIRYHRYHGRSAAVWS 234 (320)
T ss_dssp --------------------------------------------------BCCCCSCGGGSCHHHHHHSCBCHHHHHHHH
T ss_pred --------------------------------------------------ccCCCCCccCCChHHhccCCCCCccchHHh
Confidence 001368999999999987765 78999999
Q ss_pred hhhhhhhccccCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCccc
Q 004987 297 LGVLLFELFCPFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 297 LGvlL~eLltpf~~~~~~~~~~~~i~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
|||++|||+++..+.......... ...+++ ...+...+||.+||+.||.+|||+.|+++||||+....+
T Consensus 235 lG~il~el~~g~~pf~~~~~~~~~--~~~~~~---~~~~~~~~li~~~l~~dp~~Rps~~~ll~hp~~~~~~~~ 303 (320)
T 3a99_A 235 LGILLYDMVCGDIPFEHDEEIIRG--QVFFRQ---RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLP 303 (320)
T ss_dssp HHHHHHHHHHSSCSCCSHHHHHHC--CCCCSS---CCCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSCCCH
T ss_pred HHHHHHHHHHCCCCCCChhhhhcc--cccccc---cCCHHHHHHHHHHccCChhhCcCHHHHhcCHhhcCccCc
Confidence 999999999943333222221111 111111 123445599999999999999999999999999987543
No 202
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=99.97 E-value=4.9e-31 Score=280.46 Aligned_cols=208 Identities=17% Similarity=0.178 Sum_probs=156.7
Q ss_pred eeeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004987 62 LRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 62 ~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~ 140 (720)
.+..+|..++.+++||||+++++ ++.... .++++||| .|++|.+++......+++.+++.++.||+.||.|||++
T Consensus 74 ~~~~~e~~~l~~l~h~~iv~~~~-~~~~~~---~~~iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~ 149 (319)
T 2y4i_B 74 KAFKREVMAYRQTRHENVVLFMG-ACMSPP---HLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAK 149 (319)
T ss_dssp CCCCTTGGGGTTCCCTTBCCCCE-EEECSS---CEEEECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcCCCCCEeEEEE-EEecCC---ceEEEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 34557888999999999999999 555443 57999999 78999999976666799999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004987 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+|||++ ++.++|+|||++...+..... .
T Consensus 150 ~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~--------------------------------~---------- 186 (319)
T 2y4i_B 150 GILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAG--------------------------------R---------- 186 (319)
T ss_dssp TCCCCCCCSTTEEEC---CCEECCCSCCC---------------------------------------------------
T ss_pred CccccCCChhhEEEe-CCCEEEeecCCcccccccccc--------------------------------c----------
Confidence 999999999999998 689999998887433211000 0
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC---------CCCCcc
Q 004987 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG---------APVSCA 291 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~---------~~~s~~ 291 (720)
.........||+.|+|||++.+ ..++.+
T Consensus 187 -------------------------------------------~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~ 223 (319)
T 2y4i_B 187 -------------------------------------------REDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKH 223 (319)
T ss_dssp --------------------------------------------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHH
T ss_pred -------------------------------------------cccccccCCCcccccChHHhhhccccccccccCCCch
Confidence 0000011368999999999975 347899
Q ss_pred ccchhhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHc
Q 004987 292 SDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 292 sDIwSLGvlL~eLlt---pf~~~~~~~~~~~~i~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
+|||||||++|||++ ||...... .....+.....+....... +...+|+.+||..||.+|||+.++++
T Consensus 224 ~Di~slG~il~el~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~ 295 (319)
T 2y4i_B 224 SDVFALGTIWYELHAREWPFKTQPAE-AIIWQMGTGMKPNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMD 295 (319)
T ss_dssp HHHHHHHHHHHHHHHSSCSSSSCCHH-HHHHHHHTTCCCCCCCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHH
T ss_pred hhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHhccCCCCCCCcCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 999999999999999 66654443 3334444444433333233 45569999999999999999999996
No 203
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=99.97 E-value=1e-31 Score=282.79 Aligned_cols=208 Identities=14% Similarity=0.125 Sum_probs=155.9
Q ss_pred ehhhhcccC-CCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004987 66 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lV~E~~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~gIvH 144 (720)
+|..++..+ .||||+++++ ++.... ..++||||.|++|.+++...+..+++.+++.++.||+.||.|||++||+|
T Consensus 54 ~e~~~~~~l~~~~~i~~~~~-~~~~~~---~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH 129 (298)
T 1csn_A 54 DEYRTYKLLAGCTGIPNVYY-FGQEGL---HNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVY 129 (298)
T ss_dssp HHHHHHHHTTTCTTCCCEEE-EEEETT---EEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEEC
T ss_pred HHHHHHHHHhcCCCCCeEEe-ecCCCc---eeEEEEEecCCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCEec
Confidence 566677777 7999999999 554443 67999999999999999766666999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCc-----eEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004987 145 HNVRPSCFVMSSFNH-----VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 145 rDLKP~NILl~~~~~-----vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
|||||+|||++.++. ++|+|||++........... .
T Consensus 130 ~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~------------------------------~--------- 170 (298)
T 1csn_A 130 RDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQH------------------------------I--------- 170 (298)
T ss_dssp CCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCB------------------------------C---------
T ss_pred CCCCHHHEEeccCCCCCCCeEEEEECcccccccccccccc------------------------------c---------
Confidence 999999999987766 99998888754322110000 0
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhh
Q 004987 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
.........||+.|+|||++.+..++.++|||||||
T Consensus 171 --------------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~ 206 (298)
T 1csn_A 171 --------------------------------------------PYREKKNLSGTARYMSINTHLGREQSRRDDLEALGH 206 (298)
T ss_dssp --------------------------------------------CCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHH
T ss_pred --------------------------------------------cccCccCCCCCcccCCchhhcCCCCChHHHHHHHHH
Confidence 000011257899999999999998999999999999
Q ss_pred hhhhccc---cCCCCc--hHHHHHHHhhcC---CCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHc
Q 004987 300 LLFELFC---PFSTGE--EKTRTMSSLRHR---VLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 300 lL~eLlt---pf~~~~--~~~~~~~~i~~~---~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
++|||++ ||.... .....+..+... ...+.+...+| ...+|+.+||..||.+||++.+|++
T Consensus 207 il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~ 276 (298)
T 1csn_A 207 VFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQG 276 (298)
T ss_dssp HHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred HHHHHHcCCCCcchhhccccHHHHHHHHhhccCccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHH
Confidence 9999999 665532 122222222211 12222223344 4459999999999999999999985
No 204
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=99.97 E-value=1.7e-31 Score=283.78 Aligned_cols=202 Identities=16% Similarity=0.207 Sum_probs=150.0
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004987 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~gI 142 (720)
..+|..++.+++||||+++++ ++.... .+|++||| .|++|.+++.... .+++.+++.++.||+.||.|||++||
T Consensus 81 ~~~e~~~l~~l~hp~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~i 155 (309)
T 2h34_A 81 MQREARTAGRLQEPHVVPIHD-FGEIDG---QLYVDMRLINGVDLAAMLRRQG-PLAPPRAVAIVRQIGSALDAAHAAGA 155 (309)
T ss_dssp HHHHHHHHTTCCCTTBCCEEE-EEEETT---EEEEEEECCCCEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhhcCCCCeeEEEE-EEeeCC---eEEEEEEecCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCcC
Confidence 347888999999999999999 554443 67999999 7889999995543 49999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004987 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.++|+|||.+.........
T Consensus 156 ~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~--------------------------------------------- 190 (309)
T 2h34_A 156 THRDVKPENILVSADDFAYLVDFGIASATTDEKLT--------------------------------------------- 190 (309)
T ss_dssp CCSCCCGGGEEECTTSCEEECSCCC-------------------------------------------------------
T ss_pred CcCCCChHHEEEcCCCCEEEecCccCccccccccc---------------------------------------------
Confidence 99999999999999999999998887432111000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004987 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGvlL~ 302 (720)
......||+.|+|||++.+..++.++|||||||++|
T Consensus 191 --------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ 226 (309)
T 2h34_A 191 --------------------------------------------QLGNTVGTLYYMAPERFSESHATYRADIYALTCVLY 226 (309)
T ss_dssp --------------------------------------------------CCGGGCCGGGTCC----CCCHHHHHHHHHH
T ss_pred --------------------------------------------cccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHH
Confidence 001146899999999999888999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCCC-ccccccCch-HHHHHHHcCCCCCCCCC-ChHHHHc
Q 004987 303 ELFC---PFSTGEEKTRTMSSLRHRVLP-PQLLLKFPK-EASFCLWLLHPEPSGRP-KMGELLQ 360 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~i~~~~~p-~~~~~~~p~-~~~Li~~~L~~dP~~Rp-ta~eiL~ 360 (720)
||++ ||...... .....+.....+ ......+|. ..+||.+||+.||.+|| +++++++
T Consensus 227 ~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~ 289 (309)
T 2h34_A 227 ECLTGSPPYQGDQLS-VMGAHINQAIPRPSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSA 289 (309)
T ss_dssp HHHHSSCSSCSCHHH-HHHHHHHSCCCCGGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHH
T ss_pred HHHHCCCCCCCchHH-HHHHHhccCCCCccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHH
Confidence 9999 66654433 233333333222 233334444 45999999999999999 8888875
No 205
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=99.97 E-value=5.8e-32 Score=288.66 Aligned_cols=207 Identities=17% Similarity=0.235 Sum_probs=153.8
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC---CCCCHHHHHHHHHHHHHHHHHHH
Q 004987 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---RSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~---~~l~~~~~~~i~~QIl~aL~~LH 138 (720)
+..+|..++.+++||||+++++ ++.... .+++|||| .|++|.+++.... ..+++.+++.++.||+.||.|||
T Consensus 81 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH 156 (321)
T 2qkw_B 81 EFETEIETLSFCRHPHLVSLIG-FCDERN---EMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH 156 (321)
T ss_dssp HHHHHHHGGGSCCCTTBCCEEE-ECCCTT---CCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCEeeEEE-EEcCCC---eEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhc
Confidence 3447888999999999999999 554443 56999999 8899999994432 34899999999999999999999
Q ss_pred HcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCC
Q 004987 139 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~ 218 (720)
++||+||||||+|||++.++.+||+|||.+.........
T Consensus 157 ~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~----------------------------------------- 195 (321)
T 2qkw_B 157 TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQT----------------------------------------- 195 (321)
T ss_dssp HTTEECSCCCSTTEEECTTCCEEECCCTTCEECSSSSCC-----------------------------------------
T ss_pred CCCeecCCCCHHHEEECCCCCEEEeeccccccccccccc-----------------------------------------
Confidence 999999999999999999999999998887432111000
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhh
Q 004987 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
.......||+.|+|||++.+..++.++||||||
T Consensus 196 -----------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG 228 (321)
T 2qkw_B 196 -----------------------------------------------HLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFG 228 (321)
T ss_dssp -----------------------------------------------CCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHH
T ss_pred -----------------------------------------------ccccccCCCccccCHHHhcCCCCCcccchHhHH
Confidence 000113689999999999888899999999999
Q ss_pred hhhhhccc---cCCCCchH------HHHHHHhhcC----CCCccccccC-----chHHHHHHHcCCCCCCCCCChHHHHc
Q 004987 299 VLLFELFC---PFSTGEEK------TRTMSSLRHR----VLPPQLLLKF-----PKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 299 vlL~eLlt---pf~~~~~~------~~~~~~i~~~----~~p~~~~~~~-----p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|++|||++ ||...... .......... ...+.+.... +...+|+.+||+.||.+|||+.|+++
T Consensus 229 ~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~ 308 (321)
T 2qkw_B 229 VVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLW 308 (321)
T ss_dssp HHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 99999999 55432111 0001111111 1112211111 23349999999999999999999996
Q ss_pred C
Q 004987 361 S 361 (720)
Q Consensus 361 h 361 (720)
+
T Consensus 309 ~ 309 (321)
T 2qkw_B 309 K 309 (321)
T ss_dssp H
T ss_pred H
Confidence 3
No 206
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=99.97 E-value=8.1e-32 Score=290.84 Aligned_cols=211 Identities=13% Similarity=0.098 Sum_probs=155.7
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceec
Q 004987 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 145 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~gIvHr 145 (720)
+|..++..++||||+++++.+.........+|+||||.|++|.+++...+ .+++.+++.++.||+.||.|||++||+||
T Consensus 97 ~e~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~ivH~ 175 (345)
T 2v62_A 97 KKWIERKQLDYLGIPLFYGSGLTEFKGRSYRFMVMERLGIDLQKISGQNG-TFKKSTVLQLGIRMLDVLEYIHENEYVHG 175 (345)
T ss_dssp HHHHHHHTCSCCCCCCEEEEEEEESSSCEEEEEEEECEEEEHHHHCBGGG-BCCHHHHHHHHHHHHHHHHHHHHTTEECS
T ss_pred HHHHhhccccccCcceeecccccccCCCcEEEEEEeccCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeeCC
Confidence 56667888999999999995444333344789999999999999995544 59999999999999999999999999999
Q ss_pred cCCCCcEEEccCC--ceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004987 146 NVRPSCFVMSSFN--HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 146 DLKP~NILl~~~~--~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||+|||++.++ .+||+|||+++........ ..+
T Consensus 176 Dlkp~NIll~~~~~~~~kL~Dfg~a~~~~~~~~~------------------------------~~~------------- 212 (345)
T 2v62_A 176 DIKAANLLLGYKNPDQVYLADYGLSYRYCPNGNH------------------------------KQY------------- 212 (345)
T ss_dssp CCSGGGEEEESSSTTSEEECCCTTCEESSGGGCC------------------------------CCC-------------
T ss_pred CcCHHHEEEccCCCCcEEEEeCCCceeccccccc------------------------------ccc-------------
Confidence 9999999999877 9999998887443211000 000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004987 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGvlL~e 303 (720)
.........||+.|+|||++.+..++.++|||||||++||
T Consensus 213 ----------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~e 252 (345)
T 2v62_A 213 ----------------------------------------QENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLR 252 (345)
T ss_dssp ----------------------------------------CCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHH
T ss_pred ----------------------------------------hhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHH
Confidence 0000112478999999999999989999999999999999
Q ss_pred ccc---cCCCCchHHH---HHHHhhcCCCCcccc------ccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004987 304 LFC---PFSTGEEKTR---TMSSLRHRVLPPQLL------LKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 304 Llt---pf~~~~~~~~---~~~~i~~~~~p~~~~------~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|++ ||........ .........+|+.+. ...+...+|+.+||..||.+||++.+|++
T Consensus 253 ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~ 321 (345)
T 2v62_A 253 WLCGKLPWEQNLKDPVAVQTAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKK 321 (345)
T ss_dssp HHHSSCTTGGGTTCHHHHHHHHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred HHhCCCCccccccccHHHHHHHHhhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence 999 5633211111 111111122333221 22234569999999999999999999986
No 207
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=99.97 E-value=1.6e-31 Score=283.60 Aligned_cols=208 Identities=20% Similarity=0.224 Sum_probs=160.2
Q ss_pred eeeehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCC---------------CCCHHHHHH
Q 004987 63 RKHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKR---------------SVDVYECLH 125 (720)
Q Consensus 63 r~~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~---------------~l~~~~~~~ 125 (720)
+..+|..++.++ +||||+++++ ++.... ..++++||| .|++|.+++..... .+++..++.
T Consensus 76 ~~~~E~~~l~~l~~hp~iv~~~~-~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (316)
T 2xir_A 76 ALMSELKILIHIGHHLNVVNLLG-ACTKPG--GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 152 (316)
T ss_dssp HHHHHHHHHHHHCCCTTBCCEEE-EECCTT--SCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHH
T ss_pred HHHHHHHHHHhcccCCCeeeEEE-EEecCC--CceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHH
Confidence 344777888888 7999999999 444332 247999999 88999999965432 289999999
Q ss_pred HHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcc
Q 004987 126 IFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRL 205 (720)
Q Consensus 126 i~~QIl~aL~~LHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~ 205 (720)
++.||+.||.|||++||+||||||+||+++.++.+||+|||.+.......
T Consensus 153 ~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~------------------------------ 202 (316)
T 2xir_A 153 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP------------------------------ 202 (316)
T ss_dssp HHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCT------------------------------
T ss_pred HHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEECCCccccccccCc------------------------------
Confidence 99999999999999999999999999999999999999888874432110
Q ss_pred cccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC
Q 004987 206 RREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG 285 (720)
Q Consensus 206 ~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~ 285 (720)
+. .......||+.|+|||++.+
T Consensus 203 ---~~-------------------------------------------------------~~~~~~~~t~~y~aPE~~~~ 224 (316)
T 2xir_A 203 ---DY-------------------------------------------------------VRKGDARLPLKWMAPETIFD 224 (316)
T ss_dssp ---TS-------------------------------------------------------EEETTEEECGGGCCHHHHHH
T ss_pred ---cc-------------------------------------------------------eeccCCCcceeecCchhhcc
Confidence 00 00011367899999999998
Q ss_pred CCCCccccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004987 286 APVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 286 ~~~s~~sDIwSLGvlL~eLlt----pf~~~~~~~~~~~~i~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~h 361 (720)
..++.++|||||||++|||++ ||............+..+..++......+...+|+.+||+.||.+|||+.|+++|
T Consensus 225 ~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~ 304 (316)
T 2xir_A 225 RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304 (316)
T ss_dssp CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred ccccchhHHHHHHHHHHHHHhCCCCCCcccchhHHHHHHhccCccCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 889999999999999999997 5655443334444444443333323344556699999999999999999999974
No 208
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.97 E-value=2.6e-31 Score=275.03 Aligned_cols=202 Identities=15% Similarity=0.179 Sum_probs=158.4
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004987 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~gIv 143 (720)
.+|..++.+++||||+++++ ++.... .++++||| .+++|.+++......+++..++.++.||+.||.|||++||+
T Consensus 51 ~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~ 126 (267)
T 3t9t_A 51 IEEAEVMMKLSHPKLVQLYG-VCLEQA---PICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVI 126 (267)
T ss_dssp HHHHHHHHTCCCTTBCCEEE-EECSSS---SCEEEECCCTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHhCCCCCEeeEEE-EEccCC---CeEEEEeCCCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 46778899999999999999 554443 57999999 78999999976656699999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004987 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+||+++.++.++|+|||.+....... .
T Consensus 127 H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~----------------------------------~------------- 159 (267)
T 3t9t_A 127 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ----------------------------------Y------------- 159 (267)
T ss_dssp CSSCCGGGEEECGGGCEEECCTTGGGGBCCHH----------------------------------H-------------
T ss_pred cCCCchheEEECCCCCEEEccccccccccccc----------------------------------c-------------
Confidence 99999999999999999999888873321100 0
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004987 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGvlL~e 303 (720)
. ......||+.|+|||++.+..++.++|||||||++|+
T Consensus 160 -----------------------~-------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ 197 (267)
T 3t9t_A 160 -----------------------T-------------------SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWE 197 (267)
T ss_dssp -----------------------H-------------------STTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred -----------------------c-------------------ccccccccccccChhhhcCCCccchhchhhhHHHHHH
Confidence 0 0001356889999999998889999999999999999
Q ss_pred ccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004987 304 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 304 Llt----pf~~~~~~~~~~~~i~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|++ ||...... .....+.....+.......+...+|+.+||+.||.+||++.++++
T Consensus 198 l~~~g~~p~~~~~~~-~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~ 257 (267)
T 3t9t_A 198 VFSEGKIPYENRSNS-EVVEDISTGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLR 257 (267)
T ss_dssp HHTTSCCTTTTCCHH-HHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HhccCCCCCCCCCHH-HHHHHHhcCCcCCCCccCcHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 998 55544333 344444444332222223345569999999999999999999986
No 209
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.97 E-value=5.5e-31 Score=283.01 Aligned_cols=205 Identities=13% Similarity=0.147 Sum_probs=157.3
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004987 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~gI 142 (720)
..+|..++.+++||||+++++ ++.... .+++|||| .+++|.+++......+++.+++.++.||+.||.|||++||
T Consensus 93 ~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i 168 (333)
T 1mqb_A 93 FLGEAGIMGQFSHHNIIRLEG-VISKYK---PMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNY 168 (333)
T ss_dssp HHHHHHHHHTCCCTTBCCEEE-EECSSS---SEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhCCCCCCCcEEE-EEecCC---CcEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 347888999999999999999 554433 67999999 7889999997665669999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004987 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.+||+|||.+......... .+
T Consensus 169 vH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~-------------------------------~~------------ 205 (333)
T 1mqb_A 169 VHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEA-------------------------------TY------------ 205 (333)
T ss_dssp CCSCCCGGGEEECTTCCEEECCCCC-------------------------------------------------------
T ss_pred eCCCCChheEEECCCCcEEECCCCcchhhcccccc-------------------------------cc------------
Confidence 99999999999999999999999887443211000 00
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004987 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGvlL~ 302 (720)
......+|+.|+|||++.+..++.++|||||||++|
T Consensus 206 --------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ 241 (333)
T 1mqb_A 206 --------------------------------------------TTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMW 241 (333)
T ss_dssp -------------------------------------------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHH
T ss_pred --------------------------------------------ccCCCCccccccCchhcccCCCCchhhhHHHHHHHH
Confidence 000124688999999999888999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004987 303 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~i~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
||++ ||...... ..+..+..+..++......+...+|+.+||+.||.+||++.++++
T Consensus 242 ellt~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~ 302 (333)
T 1mqb_A 242 EVMTYGERPYWELSNH-EVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVS 302 (333)
T ss_dssp HHHTTSCCTTTTCCHH-HHHHHHHTTCCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred HHHcCCCCCcccCCHH-HHHHHHHCCCcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 9987 56544433 344445444333333333344569999999999999999999986
No 210
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.97 E-value=5.8e-31 Score=305.73 Aligned_cols=205 Identities=14% Similarity=0.113 Sum_probs=159.4
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004987 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~g 141 (720)
+..+|..+|.+++|||||++++ ++..+ .+|+|||| .+++|.++|......+++..++.|+.||+.||.|||++|
T Consensus 382 ~~~~E~~il~~l~hpniv~l~~-~~~~~----~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ 456 (613)
T 2ozo_A 382 EMMREAQIMHQLDNPYIVRLIG-VCQAE----ALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN 456 (613)
T ss_dssp HHHHHHHHHTTCCCTTBCCEEE-EEESS----SEEEEEECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCEeeEEE-EeccC----CeEEEEEeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3347888999999999999999 56543 47999999 899999999666667999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004987 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
||||||||+|||++.++.+||+|||+++..+..... +
T Consensus 457 iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~--------------------------------~----------- 493 (613)
T 2ozo_A 457 FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSY--------------------------------Y----------- 493 (613)
T ss_dssp CCCSCCSGGGEEEEETTEEEECCCSTTTTCC-------------------------------------------------
T ss_pred EEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCce--------------------------------e-----------
Confidence 999999999999999999999999888543221000 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004987 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGvlL 301 (720)
.......+|+.|+|||++.+..++.++|||||||+|
T Consensus 494 --------------------------------------------~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l 529 (613)
T 2ozo_A 494 --------------------------------------------TARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTM 529 (613)
T ss_dssp ----------------------------------------------------CCTTSCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred --------------------------------------------eeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHH
Confidence 000012457899999999988899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004987 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~i~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||...... ..+..+..+..++......+...+||.+||+.||.+||++.+|++
T Consensus 530 ~ellt~G~~Pf~~~~~~-~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~ 591 (613)
T 2ozo_A 530 WEALSYGQKPYKKMKGP-EVMAFIEQGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQ 591 (613)
T ss_dssp HHHHTTSCCTTTTCCSH-HHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHH
T ss_pred HHHHHCCCCCCCCCCHH-HHHHHHHcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 99997 66655443 344455544433332233345569999999999999999999874
No 211
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=99.97 E-value=7.6e-32 Score=281.37 Aligned_cols=200 Identities=16% Similarity=0.127 Sum_probs=151.6
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004987 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~-~~l~~~~~~~i~~QIl~aL~~LHs~g 141 (720)
..+|..++.+++||||+++++.+..... .+|+|||| .+++|.+++.... ..+++..++.++.||+.||.|||++|
T Consensus 61 ~~~E~~~l~~l~h~~iv~~~~~~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ 137 (278)
T 1byg_A 61 FLAEASVMTQLRHSNLVQLLGVIVEEKG---GLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN 137 (278)
T ss_dssp HHHTHHHHTTCCCTTBCCEEEEECCC-----CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhCCCCCEeeEEEEEEcCCC---ceEEEEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3467889999999999999994333322 46999999 7889999995432 23799999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004987 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.++|+|||.+......
T Consensus 138 i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~----------------------------------------------- 170 (278)
T 1byg_A 138 FVHRDLAARNVLVSEDNVAKVSDFGLTKEASST----------------------------------------------- 170 (278)
T ss_dssp CCCSCCSGGGEEECTTSCEEECCCCC------------------------------------------------------
T ss_pred ccccCCCcceEEEeCCCcEEEeecccccccccc-----------------------------------------------
Confidence 999999999999999999999988876322110
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004987 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGvlL 301 (720)
.....+++.|+|||++.+..++.++|||||||++
T Consensus 171 ----------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 204 (278)
T 1byg_A 171 ----------------------------------------------QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILL 204 (278)
T ss_dssp ---------------------------------------------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred ----------------------------------------------ccCCCccccccCHHHhCCCCCCchhcHHHHHHHH
Confidence 0002468889999999988899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004987 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~i~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|+|++ ||...... .....+..+..++......+...+|+.+||+.||.+||++.++++
T Consensus 205 ~~l~t~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~ 266 (278)
T 1byg_A 205 WEIYSFGRVPYPRIPLK-DVVPRVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLRE 266 (278)
T ss_dssp HHHHTTSCCSCTTSCGG-GHHHHHTTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHhCCCCCCCCCCHH-HHHHHHhcCCCCCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHH
Confidence 99997 55544332 333344433322222233344569999999999999999999986
No 212
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=99.97 E-value=1.7e-31 Score=285.81 Aligned_cols=208 Identities=17% Similarity=0.143 Sum_probs=157.8
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004987 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~gI 142 (720)
..+|..++.+++||||+++++ ++... ....+|+|||| .|++|.+++......+++..++.++.||+.||.|||++||
T Consensus 71 ~~~E~~~l~~l~h~~i~~~~~-~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i 148 (327)
T 3lxl_A 71 FQREIQILKALHSDFIVKYRG-VSYGP-GRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRC 148 (327)
T ss_dssp HHHHHHHHHTCCCTTBCCEEE-EEECS-SSCEEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHhcCCCceeEEEE-EEecC-CCceEEEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 447888999999999999999 44322 22368999999 7999999996544459999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004987 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.++|+|||.+...+.... ..
T Consensus 149 vH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~---------------------------------~~----------- 184 (327)
T 3lxl_A 149 VHRDLAARNILVESEAHVKIADFGLAKLLPLDKD---------------------------------YY----------- 184 (327)
T ss_dssp ECSCCSGGGEEEEETTEEEECCGGGCEECCTTCS---------------------------------EE-----------
T ss_pred cCCCCChhhEEECCCCCEEEcccccceecccCCc---------------------------------cc-----------
Confidence 9999999999999999999999888744321100 00
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004987 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGvlL~ 302 (720)
.......||+.|+|||++.+..++.++|||||||++|
T Consensus 185 -------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ 221 (327)
T 3lxl_A 185 -------------------------------------------VVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLY 221 (327)
T ss_dssp -------------------------------------------ECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHH
T ss_pred -------------------------------------------eeeccCCccccccCHHHhccCCCChHHhHHHHHHHHH
Confidence 0001135789999999999888999999999999999
Q ss_pred hccc---cCCCCchH--------------HHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004987 303 ELFC---PFSTGEEK--------------TRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 303 eLlt---pf~~~~~~--------------~~~~~~i~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
+|++ ||...... ......+..+..++......+...+|+.+||++||.+|||+.|+++
T Consensus 222 ~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~ 296 (327)
T 3lxl_A 222 ELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGP 296 (327)
T ss_dssp HHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHhCCCCCccccchhhhhcccccccccHHHHHHHhhcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 9999 44322111 1222233333333332333345569999999999999999999975
No 213
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=99.97 E-value=4.8e-31 Score=276.38 Aligned_cols=203 Identities=18% Similarity=0.167 Sum_probs=157.7
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004987 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~~LHs~g 141 (720)
..+|..++.+++||||+++++ ++.+.. .+|+|||| .|++|.+++.. ....+++..++.++.||+.||.|||++|
T Consensus 56 ~~~E~~~l~~l~h~~i~~~~~-~~~~~~---~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ 131 (288)
T 3kfa_A 56 FLKEAAVMKEIKHPNLVQLLG-VCTREP---PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN 131 (288)
T ss_dssp HHHHHHHHHHCCCTTBCCEEE-EECSSS---SEEEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhCCCCCEeeEEE-EEccCC---CEEEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCC
Confidence 336788999999999999999 555443 57999999 88999999954 3455999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004987 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.++|+|||.+.........
T Consensus 132 i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~-------------------------------------------- 167 (288)
T 3kfa_A 132 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT-------------------------------------------- 167 (288)
T ss_dssp CCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSE--------------------------------------------
T ss_pred ccCCCCCcceEEEcCCCCEEEccCccceeccCCccc--------------------------------------------
Confidence 999999999999999999999998887443211000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004987 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGvlL 301 (720)
......+|+.|+|||++.+..++.++|||||||++
T Consensus 168 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 202 (288)
T 3kfa_A 168 ---------------------------------------------AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLL 202 (288)
T ss_dssp ---------------------------------------------EETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred ---------------------------------------------cccCCccccCcCChhhhccCCCCchhhHHHHHHHH
Confidence 00013568899999999988899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004987 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~i~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|+|++ ||...... .....+.....++......+...+|+.+||.+||.+|||+.++++
T Consensus 203 ~~ll~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~ 264 (288)
T 3kfa_A 203 WEIATYGMSPYPGIDLS-QVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 264 (288)
T ss_dssp HHHHTTSCCSSTTCCGG-GHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHhCCCCCCCCCCHH-HHHHHHhccCCCCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHH
Confidence 99998 45443322 233333333222222233344569999999999999999999986
No 214
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=99.97 E-value=3.6e-31 Score=282.10 Aligned_cols=205 Identities=14% Similarity=0.102 Sum_probs=159.0
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC---------CCCCCHHHHHHHHHHHHHH
Q 004987 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---------KRSVDVYECLHIFRQIVEI 133 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~---------~~~l~~~~~~~i~~QIl~a 133 (720)
..+|..++.+++||||+++++ ++.... .+++|||| .|++|.+++... ...+++..++.++.||+.|
T Consensus 75 ~~~E~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~ 150 (322)
T 1p4o_A 75 FLNEASVMKEFNCHHVVRLLG-VVSQGQ---PTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADG 150 (322)
T ss_dssp HHHHHHHGGGCCCTTBCCEEE-EECSSS---SCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCEeeeEE-EEccCC---ccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHH
Confidence 447888999999999999999 555443 56999999 789999999432 1347999999999999999
Q ss_pred HHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccc
Q 004987 134 VYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLV 213 (720)
Q Consensus 134 L~~LHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla 213 (720)
|.|||++||+||||||+|||++.++.+||+|||++...... +.
T Consensus 151 l~~lH~~~i~H~dikp~NIli~~~~~~kl~Dfg~~~~~~~~----------------------------------~~--- 193 (322)
T 1p4o_A 151 MAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET----------------------------------DY--- 193 (322)
T ss_dssp HHHHHHTTCBCSCCSGGGEEECTTCCEEECCTTCCCGGGGG----------------------------------GC---
T ss_pred HHHHHHCCCccCCCccceEEEcCCCeEEECcCccccccccc----------------------------------cc---
Confidence 99999999999999999999999999999998887322100 00
Q ss_pred cCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCcccc
Q 004987 214 TAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASD 293 (720)
Q Consensus 214 ~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sD 293 (720)
........||+.|+|||++.+..++.++|
T Consensus 194 ---------------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~D 222 (322)
T 1p4o_A 194 ---------------------------------------------------YRKGGKGLLPVRWMSPESLKDGVFTTYSD 222 (322)
T ss_dssp ---------------------------------------------------EEGGGSSEECGGGCCHHHHHHCCCCHHHH
T ss_pred ---------------------------------------------------cccccCCCCCCCccChhhhccCCCCchhh
Confidence 00001135789999999999888999999
Q ss_pred chhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004987 294 IYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 294 IwSLGvlL~eLlt----pf~~~~~~~~~~~~i~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~h 361 (720)
||||||++|+|++ ||...... .....+.....++......+...+||.+||+.||.+|||+.|++++
T Consensus 223 i~slG~il~el~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~ 293 (322)
T 1p4o_A 223 VWSFGVVLWEIATLAEQPYQGLSNE-QVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 293 (322)
T ss_dssp HHHHHHHHHHHHHTSCCTTTTSCHH-HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCccccCCHH-HHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 9999999999998 45544333 3444444444433333333445699999999999999999999974
No 215
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=99.97 E-value=2.4e-31 Score=283.68 Aligned_cols=206 Identities=17% Similarity=0.119 Sum_probs=156.0
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004987 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~gI 142 (720)
..+|..+|.+++||||+++++ ++.+.. ...+++|||| .+++|.+++.... +++.+++.++.||+.||.|||++||
T Consensus 80 ~~~E~~~l~~l~h~~iv~~~~-~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~i~~~l~~~l~~LH~~~i 155 (318)
T 3lxp_A 80 WKQEIDILRTLYHEHIIKYKG-CCEDAG-AASLQLVMEYVPLGSLRDYLPRHS--IGLAQLLLFAQQICEGMAYLHAQHY 155 (318)
T ss_dssp HHHHHHHHHHCCCTTBCCEEE-EEEETT-TTEEEEEECCCTTCBHHHHGGGSC--CCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHhCCCcchhhEEE-EEecCC-CceEEEEEecccCCcHHHHHhhCC--CCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 447888999999999999999 554432 2368999999 7899999996543 9999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004987 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.++|+|||.+......... +
T Consensus 156 vH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~--------------------------------~------------ 191 (318)
T 3lxp_A 156 IHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEY--------------------------------Y------------ 191 (318)
T ss_dssp ECSCCSGGGEEECTTCCEEECCGGGCEECCTTCSE--------------------------------E------------
T ss_pred cCCCCchheEEEcCCCCEEECCccccccccccccc--------------------------------c------------
Confidence 99999999999999999999988887443211000 0
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004987 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGvlL~ 302 (720)
.......||+.|+|||++.+..++.++|||||||++|
T Consensus 192 -------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ 228 (318)
T 3lxp_A 192 -------------------------------------------RVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLY 228 (318)
T ss_dssp -------------------------------------------EC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHH
T ss_pred -------------------------------------------ccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHH
Confidence 0001135788999999999888999999999999999
Q ss_pred hccc---cCCCCchH--------------HHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004987 303 ELFC---PFSTGEEK--------------TRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 303 eLlt---pf~~~~~~--------------~~~~~~i~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
+|++ ||...... ......+.....++......+...+||.+||+.||.+|||+.|+++
T Consensus 229 ~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~ 303 (318)
T 3lxp_A 229 ELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIP 303 (318)
T ss_dssp HHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhcccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 9999 44332111 1112222233333333333345569999999999999999999985
No 216
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=99.97 E-value=2.5e-31 Score=297.89 Aligned_cols=206 Identities=14% Similarity=0.130 Sum_probs=157.1
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004987 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~~LHs~gI 142 (720)
.+|..+|.+++|||||++++ ++..+ .+|+|||| .+++|.++|.. .+..+++.+++.++.||+.||.|||++||
T Consensus 227 ~~E~~~l~~l~hp~iv~~~~-~~~~~----~~~iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i 301 (452)
T 1fmk_A 227 LQEAQVMKKLRHEKLVQLYA-VVSEE----PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY 301 (452)
T ss_dssp HHHHHHHHHCCCTTBCCEEE-EECSS----SCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhCCCCCEeeEEE-EEcCC----ceEEEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 46788999999999999999 55442 47999999 89999999943 23458999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004987 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.+||+|||+++........
T Consensus 302 vHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~--------------------------------------------- 336 (452)
T 1fmk_A 302 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYT--------------------------------------------- 336 (452)
T ss_dssp CCSCCSGGGEEECGGGCEEECCCCTTC-----------------------------------------------------
T ss_pred eCCCCChhhEEECCCCCEEECCCccceecCCCcee---------------------------------------------
Confidence 99999999999999999999988887432111000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004987 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGvlL~ 302 (720)
......+|+.|+|||++.+..++.++|||||||++|
T Consensus 337 --------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~ 372 (452)
T 1fmk_A 337 --------------------------------------------ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLT 372 (452)
T ss_dssp --------------------------------------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred --------------------------------------------cccCCcccccccCHhHHhcCCCCccccHHhHHHHHH
Confidence 000124678899999999888999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc--CcccC
Q 004987 303 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ--SEFLN 365 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~i~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~--hp~~~ 365 (720)
||++ ||...... .....+..+..++......+...+||.+||+.||.+|||+.+|++ ..++.
T Consensus 373 el~t~g~~P~~~~~~~-~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~ 440 (452)
T 1fmk_A 373 ELTTKGRVPYPGMVNR-EVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT 440 (452)
T ss_dssp HHHTTTCCSSTTCCHH-HHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTS
T ss_pred HHHhCCCCCCCCCCHH-HHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhc
Confidence 9998 66554443 344444444333322223344569999999999999999999986 34444
No 217
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=99.97 E-value=1.9e-31 Score=285.87 Aligned_cols=205 Identities=16% Similarity=0.186 Sum_probs=157.1
Q ss_pred eeehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC-------------CCCCCHHHHHHHHH
Q 004987 64 KHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-------------KRSVDVYECLHIFR 128 (720)
Q Consensus 64 ~~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~-------------~~~l~~~~~~~i~~ 128 (720)
..+|..++.++ +||||+++++ ++.... .+|+|||| .+++|.+++... ...+++..++.++.
T Consensus 96 ~~~E~~~l~~l~~h~~iv~~~~-~~~~~~---~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (333)
T 2i1m_A 96 LMSELKIMSHLGQHENIVNLLG-ACTHGG---PVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSS 171 (333)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EECSSS---SCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHH
T ss_pred HHHHHHHHHhhcCCCCeeeEEE-EEecCC---ceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHH
Confidence 34778889999 8999999999 555443 56999999 888999999432 33589999999999
Q ss_pred HHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccccc
Q 004987 129 QIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRRE 208 (720)
Q Consensus 129 QIl~aL~~LHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~ 208 (720)
||+.||.|||++||+||||||+|||++.++.++|+|||++.......
T Consensus 172 qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~--------------------------------- 218 (333)
T 2i1m_A 172 QVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDS--------------------------------- 218 (333)
T ss_dssp HHHHHHHHHHHTTEECSCCSGGGCEEEGGGEEEBCCCGGGCCGGGCT---------------------------------
T ss_pred HHHHHHHHHhcCCcccCCcccceEEECCCCeEEECcccccccccccc---------------------------------
Confidence 99999999999999999999999999999999999888874321110
Q ss_pred ccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCC
Q 004987 209 DLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV 288 (720)
Q Consensus 209 Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~ 288 (720)
.. .......||+.|+|||++.+..+
T Consensus 219 ~~-------------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~ 243 (333)
T 2i1m_A 219 NY-------------------------------------------------------IVKGNARLPVKWMAPESIFDCVY 243 (333)
T ss_dssp TS-------------------------------------------------------EECSSCEECGGGSCHHHHHHCCC
T ss_pred ce-------------------------------------------------------eecCCCCCCccccCHHHhccCCC
Confidence 00 00011356889999999998889
Q ss_pred Cccccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004987 289 SCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 289 s~~sDIwSLGvlL~eLlt----pf~~~~~~~~~~~~i~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
+.++|||||||++|||++ ||............+.....++......+...+|+.+||+.||.+|||+.++++
T Consensus 244 ~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~ 319 (333)
T 2i1m_A 244 TVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICS 319 (333)
T ss_dssp CHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence 999999999999999997 665544333333333333322222223344569999999999999999999986
No 218
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=99.97 E-value=1.6e-31 Score=285.92 Aligned_cols=209 Identities=14% Similarity=0.144 Sum_probs=158.5
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC------CCCCHHHHHHHHHHHHHHHH
Q 004987 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK------RSVDVYECLHIFRQIVEIVY 135 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~------~~l~~~~~~~i~~QIl~aL~ 135 (720)
+..+|..++.+++||||+++++ ++.... .+|+|||| .|++|.+++.... ..+++.+++.++.||+.||.
T Consensus 79 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~ 154 (327)
T 2yfx_A 79 DFLMEALIISKFNHQNIVRCIG-VSLQSL---PRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 154 (327)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EECSSS---SCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhCCCCCCCeEEE-EEcCCC---CcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHH
Confidence 4447888999999999999999 554443 46999999 7999999995432 34899999999999999999
Q ss_pred HHHHcCceeccCCCCcEEEcc---CCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccccccccc
Q 004987 136 AAHSQGIVVHNVRPSCFVMSS---FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQL 212 (720)
Q Consensus 136 ~LHs~gIvHrDLKP~NILl~~---~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgl 212 (720)
|||++||+||||||+|||++. ...++|+|||.+....... .
T Consensus 155 ~LH~~~i~H~dlkp~NIli~~~~~~~~~kl~Dfg~~~~~~~~~----------------------------------~-- 198 (327)
T 2yfx_A 155 YLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAS----------------------------------Y-- 198 (327)
T ss_dssp HHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHC---------------------------------------
T ss_pred HHhhCCeecCcCCHhHEEEecCCCcceEEECcccccccccccc----------------------------------c--
Confidence 999999999999999999984 4459998888763211000 0
Q ss_pred ccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccc
Q 004987 213 VTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCAS 292 (720)
Q Consensus 213 a~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~s 292 (720)
........||+.|+|||++.+..++.++
T Consensus 199 ----------------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~ 226 (327)
T 2yfx_A 199 ----------------------------------------------------YRKGGCAMLPVKWMPPEAFMEGIFTSKT 226 (327)
T ss_dssp -------------------------------------------------------CCGGGSCGGGCCHHHHHHCCCCHHH
T ss_pred ----------------------------------------------------cccCCCcCCCcceeCHhHhcCCCCCchh
Confidence 0000114678999999999888899999
Q ss_pred cchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004987 293 DIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 293 DIwSLGvlL~eLlt----pf~~~~~~~~~~~~i~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
|||||||++|+|++ ||...... .....+.....++......+...+||.+||+.||.+||++.+++++.++
T Consensus 227 Di~slG~il~ellt~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~ 301 (327)
T 2yfx_A 227 DTWSFGVLLWEIFSLGYMPYPSKSNQ-EVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEY 301 (327)
T ss_dssp HHHHHHHHHHHHHTTSCCSSTTCCHH-HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHcCCCCCCCCcCHH-HHHHHHhcCCCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHH
Confidence 99999999999997 55544332 3444444433333222333455699999999999999999999997664
No 219
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=99.97 E-value=9.9e-31 Score=277.74 Aligned_cols=208 Identities=13% Similarity=0.071 Sum_probs=154.8
Q ss_pred eeehhhhcccCCCCCceecccceeecCC-CCCcEEEEEec-CCCCHHHHHh-----CCCCCCCHHHHHHHHHHHHHHHHH
Q 004987 64 KHSDGVELTHGDHLRNQGGLSGVCENEA-AIDPFVHAIEW-GDVSLRQWLD-----KPKRSVDVYECLHIFRQIVEIVYA 136 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~-~~~~~~lV~E~-~g~sL~~~L~-----~~~~~l~~~~~~~i~~QIl~aL~~ 136 (720)
..+|..++.+++||||+++++.+..... ....++++||| .+++|.+++. .....+++.+++.++.||+.||.|
T Consensus 83 ~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~ 162 (313)
T 3brb_A 83 FLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEY 162 (313)
T ss_dssp HHHHHHHHHTCCCTTBCCCCEEEEC-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCCeeeeeEEEeeccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHH
Confidence 3477889999999999999994433222 22357999999 8899999983 233559999999999999999999
Q ss_pred HHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCC
Q 004987 137 AHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 216 (720)
Q Consensus 137 LHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~ 216 (720)
||++||+||||||+|||++.++.+||+|||.+.........
T Consensus 163 LH~~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~--------------------------------------- 203 (313)
T 3brb_A 163 LSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYY--------------------------------------- 203 (313)
T ss_dssp HHTTTCCCCCCSGGGEEECTTSCEEECSCSCC------------------------------------------------
T ss_pred HHhCCcccCCCCcceEEEcCCCcEEEeecCcceeccccccc---------------------------------------
Confidence 99999999999999999999999999999887432111000
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchh
Q 004987 217 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYR 296 (720)
Q Consensus 217 ~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwS 296 (720)
.......+++.|+|||.+.+..++.++||||
T Consensus 204 -------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s 234 (313)
T 3brb_A 204 -------------------------------------------------RQGRIAKMPVKWIAIESLADRVYTSKSDVWA 234 (313)
T ss_dssp --------------------------------------------------------CCGGGSCHHHHHSSCCCHHHHHHH
T ss_pred -------------------------------------------------CcccccCCCccccCchhhcCCCccchhhhHH
Confidence 0001135688999999999988999999999
Q ss_pred hhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004987 297 LGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 297 LGvlL~eLlt----pf~~~~~~~~~~~~i~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++|+|++ ||...... .....+..+..++......+...+|+.+||..||.+|||+.++++
T Consensus 235 lG~il~el~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~ 301 (313)
T 3brb_A 235 FGVTMWEIATRGMTPYPGVQNH-EMYDYLLHGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRL 301 (313)
T ss_dssp HHHHHHHHHTTSCCSSTTCCGG-GHHHHHHTTCCCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHHhcCCCCCccCCHH-HHHHHHHcCCCCCCCccccHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 9999999998 45544333 333344444333333334455669999999999999999999986
No 220
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=99.97 E-value=8.3e-31 Score=275.53 Aligned_cols=204 Identities=13% Similarity=0.110 Sum_probs=158.0
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004987 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~g 141 (720)
+..+|..++..++||||+++++ ++..+ .+++|||| .+++|.+++... ..+++.+++.++.||+.||.|||++|
T Consensus 64 ~~~~e~~~l~~l~h~~i~~~~~-~~~~~----~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~ 137 (291)
T 1xbb_A 64 ELLAEANVMQQLDNPYIVRMIG-ICEAE----SWMLVMEMAELGPLNKYLQQN-RHVKDKNIIELVHQVSMGMKYLEESN 137 (291)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEE-EEESS----SEEEEEECCTTEEHHHHHHHC-TTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCEEEEEE-EECCC----CcEEEEEeCCCCCHHHHHHhC-cCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3447888999999999999999 55332 57999999 889999999654 34999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004987 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.++|+|||.+......... .
T Consensus 138 i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~--------------------------------~----------- 174 (291)
T 1xbb_A 138 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY--------------------------------Y----------- 174 (291)
T ss_dssp EECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSE--------------------------------E-----------
T ss_pred eEcCCCCcceEEEeCCCcEEEccCCcceeeccCCCc--------------------------------c-----------
Confidence 999999999999999999999999887433211000 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004987 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGvlL 301 (720)
.......+|+.|+|||++.+..++.++|||||||++
T Consensus 175 --------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 210 (291)
T 1xbb_A 175 --------------------------------------------KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLM 210 (291)
T ss_dssp --------------------------------------------EC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHH
T ss_pred --------------------------------------------cccccCCCCceeeChHHhccCCCChhhhHHHHHHHH
Confidence 000012467899999999888899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004987 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~i~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|+|++ ||...... .....+.....++......+...+||.+||+.||.+||++.++++
T Consensus 211 ~~l~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~ 272 (291)
T 1xbb_A 211 WEAFSYGQKPYRGMKGS-EVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVEL 272 (291)
T ss_dssp HHHHTTTCCSSTTCCHH-HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred HHHHhcCCCCCCCCCHH-HHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 99998 56554433 344444444333332233345569999999999999999999985
No 221
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=99.97 E-value=3.4e-31 Score=277.74 Aligned_cols=205 Identities=16% Similarity=0.089 Sum_probs=157.0
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004987 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~g 141 (720)
+..+|..++.+++||||+++++ ++... .+++|||| .+++|.+++......+++.+++.++.||+.||.|||++|
T Consensus 67 ~~~~e~~~l~~l~h~~i~~~~~-~~~~~----~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ 141 (291)
T 1u46_A 67 DFIREVNAMHSLDHRNLIRLYG-VVLTP----PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR 141 (291)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EECSS----SCEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCcccEEE-EEccC----CceeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3347788899999999999999 55443 26899999 889999999655455999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004987 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.++|+|||.+......... .
T Consensus 142 i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~--------------------------------~----------- 178 (291)
T 1u46_A 142 FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH--------------------------------Y----------- 178 (291)
T ss_dssp EECSCCCGGGEEEEETTEEEECCCTTCEECCC-CCE--------------------------------E-----------
T ss_pred cccCCCchheEEEcCCCCEEEccccccccccccccc--------------------------------h-----------
Confidence 999999999999999999999998887443211000 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004987 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGvlL 301 (720)
.......+|+.|+|||++.+..++.++|||||||++
T Consensus 179 --------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 214 (291)
T 1u46_A 179 --------------------------------------------VMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTL 214 (291)
T ss_dssp --------------------------------------------EC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHH
T ss_pred --------------------------------------------hhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHH
Confidence 000013568899999999888899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcC-CCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004987 302 FELFC----PFSTGEEKTRTMSSLRHR-VLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~i~~~-~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|+|++ ||...... .....+... ..++......+...+|+.+||..||.+|||+.++++
T Consensus 215 ~~l~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~ 277 (291)
T 1u46_A 215 WEMFTYGQEPWIGLNGS-QILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRD 277 (291)
T ss_dssp HHHHTTSCCTTTTCCHH-HHHHHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHhCCCCCcccCCHH-HHHHHHHccCCCCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 99997 56554443 333333332 222222233344569999999999999999999986
No 222
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=99.97 E-value=7.6e-31 Score=278.22 Aligned_cols=204 Identities=17% Similarity=0.233 Sum_probs=153.1
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHH
Q 004987 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~---~~~~l~~~~~~~i~~QIl~aL~~LH 138 (720)
+..+|..++.+++||||+++++ ++.... .+++|||| .+++|.+++.. ....+++..++.++.||+.||.|||
T Consensus 78 ~~~~E~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH 153 (310)
T 2wqm_A 78 DCIKEIDLLKQLNHPNVIKYYA-SFIEDN---ELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH 153 (310)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEE-EEEETT---EEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCEeeEEE-EEEcCC---cEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHh
Confidence 3347888999999999999999 444432 57999999 88899999943 3455999999999999999999999
Q ss_pred HcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCC
Q 004987 139 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~ 218 (720)
++||+||||||+||+++.++.++|+|||.+........
T Consensus 154 ~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~~~------------------------------------------ 191 (310)
T 2wqm_A 154 SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT------------------------------------------ 191 (310)
T ss_dssp HTTCCCCCCCGGGEEECTTSCEEECCC-----------------------------------------------------
T ss_pred hCCeeCCCCcHHHEEEcCCCCEEEEeccceeeecCCCc------------------------------------------
Confidence 99999999999999999999999998887733211100
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhh
Q 004987 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
......||+.|+|||++.+..++.++||||||
T Consensus 192 ------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG 223 (310)
T 2wqm_A 192 ------------------------------------------------AAHSLVGTPYYMSPERIHENGYNFKSDIWSLG 223 (310)
T ss_dssp -------------------------------------------------------CCSSCCHHHHTTCCCCHHHHHHHHH
T ss_pred ------------------------------------------------cccccCCCeeEeChHHhCCCCCCchhhHHHHH
Confidence 00013679999999999998899999999999
Q ss_pred hhhhhccc---cCCCCc-hHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHc
Q 004987 299 VLLFELFC---PFSTGE-EKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 299 vlL~eLlt---pf~~~~-~~~~~~~~i~~~~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|++|+|++ ||.... ........+....+++.....++ ...+|+.+||+.||.+|||+.++++
T Consensus 224 ~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~ 290 (310)
T 2wqm_A 224 CLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYD 290 (310)
T ss_dssp HHHHHHHHSSCTTC---CCHHHHHHHHHTTCSCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHhCCCCCcccchhHHHHHHHhhcccCCCCcccccCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 99999999 554432 22233444444444444334444 4559999999999999999999986
No 223
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=99.97 E-value=6.8e-31 Score=278.88 Aligned_cols=206 Identities=18% Similarity=0.271 Sum_probs=153.6
Q ss_pred eeeehhhhcccC----CCCCceecccceeecCCCCCcEEEEEec--CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHH
Q 004987 63 RKHSDGVELTHG----DHLRNQGGLSGVCENEAAIDPFVHAIEW--GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYA 136 (720)
Q Consensus 63 r~~~e~~~L~~l----~HpnIV~l~~~~~~~~~~~~~~~lV~E~--~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~ 136 (720)
+..+|..++.++ +||||+++++ ++.... .+++|||+ .+++|.+++.... .+++..++.++.||+.||.|
T Consensus 80 ~~~~e~~~l~~l~~~~~h~~i~~~~~-~~~~~~---~~~~v~e~~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~ 154 (312)
T 2iwi_A 80 TCPLEVALLWKVGAGGGHPGVIRLLD-WFETQE---GFMLVLERPLPAQDLFDYITEKG-PLGEGPSRCFFGQVVAAIQH 154 (312)
T ss_dssp CCCHHHHHHHHHHSSCCCSSBCCEEE-EC--------CEEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcccCCCCCeeeEEE-EEecCC---eEEEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHH
Confidence 444677777777 8999999999 554443 46899997 6899999995533 49999999999999999999
Q ss_pred HHHcCceeccCCCCcEEEc-cCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccC
Q 004987 137 AHSQGIVVHNVRPSCFVMS-SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 215 (720)
Q Consensus 137 LHs~gIvHrDLKP~NILl~-~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~ 215 (720)
||++||+||||||+||+++ .++.++|+|||.+.......
T Consensus 155 lH~~~i~H~dlkp~Nil~~~~~~~~kl~dfg~~~~~~~~~---------------------------------------- 194 (312)
T 2iwi_A 155 CHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEP---------------------------------------- 194 (312)
T ss_dssp HHHHTEECCCCSGGGEEEETTTTEEEECCCSSCEECCSSC----------------------------------------
T ss_pred HHHCCeeecCCChhhEEEeCCCCeEEEEEcchhhhcccCc----------------------------------------
Confidence 9999999999999999999 88999998888773321100
Q ss_pred CCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCC-Cccccc
Q 004987 216 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDI 294 (720)
Q Consensus 216 ~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~-s~~sDI 294 (720)
.....||+.|+|||++.+..+ +.++||
T Consensus 195 ----------------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~Di 222 (312)
T 2iwi_A 195 ----------------------------------------------------YTDFDGTRVYSPPEWISRHQYHALPATV 222 (312)
T ss_dssp ----------------------------------------------------BCCCCSCTTTSCHHHHHHSCBCHHHHHH
T ss_pred ----------------------------------------------------ccccCCcccccCceeeecCCCCCccchH
Confidence 001357999999999987665 568999
Q ss_pred hhhhhhhhhccccCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCccc
Q 004987 295 YRLGVLLFELFCPFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 295 wSLGvlL~eLltpf~~~~~~~~~~~~i~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
|||||++|||+++..+.......... ...++. ...+...+||.+||+.||.+|||+.|+|+||||+.....
T Consensus 223 ~slG~il~~l~~g~~pf~~~~~~~~~--~~~~~~---~~~~~~~~li~~~l~~~p~~Rps~~e~l~~~~~~~~~~~ 293 (312)
T 2iwi_A 223 WSLGILLYDMVCGDIPFERDQEILEA--ELHFPA---HVSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQTPAED 293 (312)
T ss_dssp HHHHHHHHHHHHSSCSCCSHHHHHHT--CCCCCT---TSCHHHHHHHHHHTCSSTTTSCCHHHHHHSTTTCC----
T ss_pred HHHHHHHHHHHHCCCCCCChHHHhhh--ccCCcc---cCCHHHHHHHHHHccCChhhCcCHHHHhcChhhcCchhc
Confidence 99999999999944333322222111 111221 223445699999999999999999999999999987543
No 224
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=99.97 E-value=9.7e-31 Score=280.20 Aligned_cols=208 Identities=13% Similarity=0.146 Sum_probs=150.1
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHc---
Q 004987 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ--- 140 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~--- 140 (720)
+.+...+..++||||+++++.+.........+|+|||| .+++|.+++... .+++..++.++.||+.||.|||++
T Consensus 79 e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~ 156 (337)
T 3mdy_A 79 ETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKST--TLDAKSMLKLAYSSVSGLCHLHTEIFS 156 (337)
T ss_dssp HHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHSCBCS
T ss_pred HHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEEEEeccCCCcHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 34444455569999999999444443333578999999 789999999554 499999999999999999999998
Q ss_pred -----CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccC
Q 004987 141 -----GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 215 (720)
Q Consensus 141 -----gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~ 215 (720)
||+||||||+|||++.++.+||+|||++.........
T Consensus 157 ~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~-------------------------------------- 198 (337)
T 3mdy_A 157 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNE-------------------------------------- 198 (337)
T ss_dssp TTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEECC-------------------------------------------
T ss_pred hccCCCEEecccchHHEEECCCCCEEEEeCCCceeecccccc--------------------------------------
Confidence 9999999999999999999999999887443211000
Q ss_pred CCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCcc----
Q 004987 216 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCA---- 291 (720)
Q Consensus 216 ~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~---- 291 (720)
.........||+.|+|||++.+..++..
T Consensus 199 ------------------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~ 230 (337)
T 3mdy_A 199 ------------------------------------------------VDIPPNTRVGTKRYMPPEVLDESLNRNHFQSY 230 (337)
T ss_dssp ----------------------------------------------------CCSSCSCGGGCCHHHHTTCCCTTCTHHH
T ss_pred ------------------------------------------------ccCCCCCCccCcceeChhhcccccCCccccCc
Confidence 0000011478999999999988776655
Q ss_pred --ccchhhhhhhhhcccc-------------CCCC----chHHHHHHHhhcCCCCccccc-----cC-chHHHHHHHcCC
Q 004987 292 --SDIYRLGVLLFELFCP-------------FSTG----EEKTRTMSSLRHRVLPPQLLL-----KF-PKEASFCLWLLH 346 (720)
Q Consensus 292 --sDIwSLGvlL~eLltp-------------f~~~----~~~~~~~~~i~~~~~p~~~~~-----~~-p~~~~Li~~~L~ 346 (720)
+|||||||++|||+++ |... .........+......+.+.. .. +...+|+.+||+
T Consensus 231 ~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~ 310 (337)
T 3mdy_A 231 IMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWA 310 (337)
T ss_dssp HHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSC
T ss_pred cccchHHHHHHHHHHHhccCcccccccccccHhhhcCCCCchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhh
Confidence 9999999999999984 2211 111222222222222222222 12 234599999999
Q ss_pred CCCCCCCChHHHHc
Q 004987 347 PEPSGRPKMGELLQ 360 (720)
Q Consensus 347 ~dP~~Rpta~eiL~ 360 (720)
.||.+|||+.++++
T Consensus 311 ~dP~~Rps~~ell~ 324 (337)
T 3mdy_A 311 HNPASRLTALRVKK 324 (337)
T ss_dssp SSGGGSCCHHHHHH
T ss_pred hChhhCCCHHHHHH
Confidence 99999999999986
No 225
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=99.97 E-value=4.8e-31 Score=307.43 Aligned_cols=203 Identities=13% Similarity=0.110 Sum_probs=157.3
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004987 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~gI 142 (720)
..+|..+|.+++|||||++++ +++.+ .+++|||| .+++|.++|... ..+++.+++.|+.||+.||.|||++||
T Consensus 417 ~~~E~~il~~l~hpnIv~l~~-~~~~~----~~~lv~E~~~~g~L~~~l~~~-~~l~~~~~~~i~~qi~~~L~yLH~~~i 490 (635)
T 4fl3_A 417 LLAEANVMQQLDNPYIVRMIG-ICEAE----SWMLVMEMAELGPLNKYLQQN-RHVKDKNIIELVHQVSMGMKYLEESNF 490 (635)
T ss_dssp HHHHHHHHHHCCCTTBCCEEE-EEESS----SEEEEEECCTTEEHHHHHHHC-TTCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhCCCCCEeeEEE-EEecC----CEEEEEEccCCCCHHHHHhhC-CCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence 337888999999999999999 66543 47899999 899999999554 349999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004987 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
|||||||+|||++.++.+||+|||+++....... +
T Consensus 491 iHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~---------------------------------~------------ 525 (635)
T 4fl3_A 491 VHRDLAARNVLLVTQHYAKISDFGLSKALRADEN---------------------------------Y------------ 525 (635)
T ss_dssp CCSCCSGGGEEEEETTEEEECCTTHHHHTTC-------------------------------------------------
T ss_pred eCCCCChHhEEEeCCCCEEEEEcCCccccccCcc---------------------------------c------------
Confidence 9999999999999999999998888744321100 0
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004987 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGvlL~ 302 (720)
........||+.|+|||++.+..++.++|||||||++|
T Consensus 526 ------------------------------------------~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ 563 (635)
T 4fl3_A 526 ------------------------------------------YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMW 563 (635)
T ss_dssp ---------------------------------------------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred ------------------------------------------cccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHH
Confidence 00001134688999999999888999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004987 303 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~i~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
||++ ||...... .....+..+..++......+...+||.+||+.||.+||++.+|++
T Consensus 564 ellt~G~~Pf~~~~~~-~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~ 624 (635)
T 4fl3_A 564 EAFSYGQKPYRGMKGS-EVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVEL 624 (635)
T ss_dssp HHHTTTCCSSTTCCHH-HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred HHHhCCCCCCCCCCHH-HHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence 9997 66655443 344445444433332233344569999999999999999999975
No 226
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=99.97 E-value=5.4e-31 Score=295.38 Aligned_cols=202 Identities=13% Similarity=0.135 Sum_probs=157.5
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004987 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~~LHs~g 141 (720)
..+|..+|.+++|||||++++ ++... .+|+|||| .+++|.++|... ...+++.+++.++.||+.||.|||++|
T Consensus 230 ~~~E~~~l~~l~h~~iv~l~~-~~~~~----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ 304 (454)
T 1qcf_A 230 FLAEANVMKTLQHDKLVKLHA-VVTKE----PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN 304 (454)
T ss_dssp HHHHHHHHTTCCCTTBCCEEE-EECSS----SCEEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhhCCCCCEeeEEE-EEeCC----ccEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 347888999999999999999 55422 47999999 899999999543 235899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004987 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||+++...... +
T Consensus 305 ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~----------------------------------~----------- 339 (454)
T 1qcf_A 305 YIHRDLRAANILVSASLVCKIADFGLARVIEDNE----------------------------------Y----------- 339 (454)
T ss_dssp CCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHH----------------------------------H-----------
T ss_pred ccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCc----------------------------------e-----------
Confidence 9999999999999999999999888874321100 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004987 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGvlL 301 (720)
. ......+|+.|+|||++.+..++.++|||||||+|
T Consensus 340 -------------------------~-------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l 375 (454)
T 1qcf_A 340 -------------------------T-------------------AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILL 375 (454)
T ss_dssp -------------------------H-------------------TTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred -------------------------e-------------------ccCCCcccccccCHHHhccCCCCcHHHHHhHHHHH
Confidence 0 00002457889999999988899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004987 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~i~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||...... .....+..+..++......+...+||.+||+.||.+|||+.+|+.
T Consensus 376 ~el~t~g~~P~~~~~~~-~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~ 437 (454)
T 1qcf_A 376 MEIVTYGRIPYPGMSNP-EVIRALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQS 437 (454)
T ss_dssp HHHHTTSCCSSTTCCHH-HHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHhCCCCCCCCCCHH-HHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHH
Confidence 99998 66655443 344444444333333333344569999999999999999999975
No 227
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=99.97 E-value=1.1e-30 Score=296.02 Aligned_cols=202 Identities=19% Similarity=0.176 Sum_probs=157.6
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004987 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~~LHs~gI 142 (720)
.+|..+|.+++|||||++++ ++.... .+|+|||| .+++|.++|.. ....+++..++.++.||+.||.|||++||
T Consensus 264 ~~E~~~l~~l~hpniv~l~~-~~~~~~---~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~i 339 (495)
T 1opk_A 264 LKEAAVMKEIKHPNLVQLLG-VCTREP---PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF 339 (495)
T ss_dssp HHHHHHHHHCCCTTBCCEEE-EECSSS---SCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHhcCCCCEeeEEE-EEecCC---cEEEEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 36788999999999999999 555443 56999999 88999999954 34558999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004987 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.+||+|||+++........
T Consensus 340 vHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~--------------------------------------------- 374 (495)
T 1opk_A 340 IHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYT--------------------------------------------- 374 (495)
T ss_dssp ECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEE---------------------------------------------
T ss_pred ccCCCChhhEEECCCCcEEEeecccceeccCCcee---------------------------------------------
Confidence 99999999999999999999988887433111000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004987 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGvlL~ 302 (720)
......+++.|+|||++.+..++.++|||||||+||
T Consensus 375 --------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~ 410 (495)
T 1opk_A 375 --------------------------------------------AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLW 410 (495)
T ss_dssp --------------------------------------------CCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHH
T ss_pred --------------------------------------------ecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHH
Confidence 000124578899999999888999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004987 303 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~i~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
||++ ||...... .....+......+......+...+||.+||+.||.+|||+.+|++
T Consensus 411 el~t~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~ 471 (495)
T 1opk_A 411 EIATYGMSPYPGIDLS-QVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 471 (495)
T ss_dssp HHHTTSCCSSTTCCGG-GHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHhCCCCCCCCCCHH-HHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHH
Confidence 9998 56554332 333344433332222223344569999999999999999999986
No 228
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=99.97 E-value=6.7e-31 Score=303.79 Aligned_cols=213 Identities=15% Similarity=0.126 Sum_probs=156.5
Q ss_pred eeeehhhhcccCCCCCceecccceeec---CCCCCcEEEEEec-CCCCHHHHHhCCC--CCCCHHHHHHHHHHHHHHHHH
Q 004987 63 RKHSDGVELTHGDHLRNQGGLSGVCEN---EAAIDPFVHAIEW-GDVSLRQWLDKPK--RSVDVYECLHIFRQIVEIVYA 136 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~---~~~~~~~~lV~E~-~g~sL~~~L~~~~--~~l~~~~~~~i~~QIl~aL~~ 136 (720)
+..+|..++.+++|||||++++ ++.. .......|+|||| .|++|.+++.... ..+++..++.++.||+.||.|
T Consensus 58 ~~~~Ei~iL~~L~HpnIV~l~~-v~~~~~~~~~~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~y 136 (676)
T 3qa8_A 58 RWCLEIQIMKKLNHPNVVSARE-VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRY 136 (676)
T ss_dssp HHHHHHHHHHHCCBTTBCCEEE-CCTTTCCCCTTSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCCceee-eecccccccCCCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHH
Confidence 3446888999999999999999 4433 1123467999999 7999999996533 358999999999999999999
Q ss_pred HHHcCceeccCCCCcEEEccCCc---eEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccc
Q 004987 137 AHSQGIVVHNVRPSCFVMSSFNH---VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLV 213 (720)
Q Consensus 137 LHs~gIvHrDLKP~NILl~~~~~---vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla 213 (720)
||++||+||||||+|||++.++. ++|+|||.+.......
T Consensus 137 LHs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~~~~~~-------------------------------------- 178 (676)
T 3qa8_A 137 LHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE-------------------------------------- 178 (676)
T ss_dssp HHHTTBCCCCCCSTTEEEECCSSSCEEEECSCCCCCBTTSCC--------------------------------------
T ss_pred HHHCCCccCCCCHHHeEeecCCCceeEEEccccccccccccc--------------------------------------
Confidence 99999999999999999997665 8888888774321110
Q ss_pred cCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCcccc
Q 004987 214 TAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASD 293 (720)
Q Consensus 214 ~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sD 293 (720)
......||+.|+|||++.+..++.++|
T Consensus 179 -----------------------------------------------------~~~~~~gt~~Y~APE~l~~~~~s~ksD 205 (676)
T 3qa8_A 179 -----------------------------------------------------LCTEFVGTLQYLAPELLEQKKYTVTVD 205 (676)
T ss_dssp -----------------------------------------------------CCCCCCSCCTTCSSCSSCCSCCSTTHH
T ss_pred -----------------------------------------------------ccccccCCcccCChHHhccCCCCchhH
Confidence 001146899999999999989999999
Q ss_pred chhhhhhhhhccc---cCCCCchHHHHHHHh---------hc----C--------CCCccccccCch-HHHHHHHcCCCC
Q 004987 294 IYRLGVLLFELFC---PFSTGEEKTRTMSSL---------RH----R--------VLPPQLLLKFPK-EASFCLWLLHPE 348 (720)
Q Consensus 294 IwSLGvlL~eLlt---pf~~~~~~~~~~~~i---------~~----~--------~~p~~~~~~~p~-~~~Li~~~L~~d 348 (720)
||||||++|+|++ ||.+..........+ .. + ..|..+....+. ..+||.+||.+|
T Consensus 206 IwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~D 285 (676)
T 3qa8_A 206 YWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWH 285 (676)
T ss_dssp HHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSS
T ss_pred HHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCC
Confidence 9999999999999 665432221110000 00 0 001112222333 349999999999
Q ss_pred CCCCCChHHHHcCcccCCC
Q 004987 349 PSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 349 P~~Rpta~eiL~hp~~~~~ 367 (720)
|.+|||+.|+|+||||...
T Consensus 286 P~kRPTa~elL~hp~F~~l 304 (676)
T 3qa8_A 286 QRQRGTDPQNPNVGCFQAL 304 (676)
T ss_dssp CC---CCTTCCCCTTHHHH
T ss_pred HhhCcCHHHHhcCHHHHHH
Confidence 9999999999999999875
No 229
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=99.97 E-value=1.3e-30 Score=279.94 Aligned_cols=205 Identities=16% Similarity=0.170 Sum_probs=158.6
Q ss_pred eeeehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC---------------CCCCHHHHHH
Q 004987 63 RKHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---------------RSVDVYECLH 125 (720)
Q Consensus 63 r~~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~---------------~~l~~~~~~~ 125 (720)
+..+|..++.++ +||||+++++ ++.... .+|+|||| .+++|.+++.... ..+++.+++.
T Consensus 86 ~~~~E~~~l~~l~~hp~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (334)
T 2pvf_A 86 DLVSEMEMMKMIGKHKNIINLLG-ACTQDG---PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161 (334)
T ss_dssp HHHHHHHHHHHHCCCTTBCCEEE-EECSSS---CCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHH
T ss_pred HHHHHHHHHHHhhcCCCEeeEEE-EEccCC---ceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHH
Confidence 344777888888 8999999999 554443 56999999 8899999995433 2489999999
Q ss_pred HHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcc
Q 004987 126 IFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRL 205 (720)
Q Consensus 126 i~~QIl~aL~~LHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~ 205 (720)
++.||+.||.|||++||+||||||+|||++.++.+||+|||.+...+....
T Consensus 162 i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~----------------------------- 212 (334)
T 2pvf_A 162 CTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDY----------------------------- 212 (334)
T ss_dssp HHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECTTTSS-----------------------------
T ss_pred HHHHHHHHHHHHHhCCeeCCCCccceEEEcCCCCEEEcccccccccccccc-----------------------------
Confidence 999999999999999999999999999999999999999988743321100
Q ss_pred cccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC
Q 004987 206 RREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG 285 (720)
Q Consensus 206 ~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~ 285 (720)
+ .......+|+.|+|||++.+
T Consensus 213 ----~-------------------------------------------------------~~~~~~~~~~~y~aPE~~~~ 233 (334)
T 2pvf_A 213 ----Y-------------------------------------------------------KKTTNGRLPVKWMAPEALFD 233 (334)
T ss_dssp ----E-------------------------------------------------------ECCSCCCCCGGGCCHHHHHH
T ss_pred ----c-------------------------------------------------------cccCCCCcccceeChHHhcC
Confidence 0 00001356889999999988
Q ss_pred CCCCccccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004987 286 APVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 286 ~~~s~~sDIwSLGvlL~eLlt----pf~~~~~~~~~~~~i~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
..++.++|||||||++|||++ ||..... ......+..+..++......+...+|+.+||+.||.+|||+.|+++
T Consensus 234 ~~~~~~~Di~slG~il~ellt~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 311 (334)
T 2pvf_A 234 RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV-EELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311 (334)
T ss_dssp CEECHHHHHHHHHHHHHHHHTTSCCSSTTCCH-HHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCcChHHHHHHHHHHHHHHHhCCCCCcCcCCH-HHHHHHHhcCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 889999999999999999998 5554433 2344444444333333333445569999999999999999999986
No 230
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=99.97 E-value=2e-30 Score=272.39 Aligned_cols=211 Identities=17% Similarity=0.134 Sum_probs=156.5
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004987 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~gIv 143 (720)
..+|..++..+.|++++..+..++.... ..++||||.+++|.+++......+++.+++.++.||+.||.|||++||+
T Consensus 51 ~~~e~~~l~~l~~~~~i~~~~~~~~~~~---~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~iv 127 (296)
T 4hgt_A 51 LHIESKIYKMMQGGVGIPTIRWCGAEGD---YNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFI 127 (296)
T ss_dssp HHHHHHHHHHHTTSTTCCCEEEEEEETT---EEEEEEECCCCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHHHhcCCCCCCeeeeecCCCC---ceEEEEEccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 3467778999999999988884444432 5799999999999999975556699999999999999999999999999
Q ss_pred eccCCCCcEEE---ccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004987 144 VHNVRPSCFVM---SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 144 HrDLKP~NILl---~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||||||+|||+ +.++.+||+|||.+........... .
T Consensus 128 H~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~------------------------------~---------- 167 (296)
T 4hgt_A 128 HRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQH------------------------------I---------- 167 (296)
T ss_dssp CSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCB------------------------------C----------
T ss_pred cCCCCHHHeeeeccCCCCeEEEecCccceeccCcccCcc------------------------------C----------
Confidence 99999999999 7889999999988854322210000 0
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhh
Q 004987 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
. ........||+.|+|||++.+..++.++|||||||+
T Consensus 168 ------------------------------------------~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~i 204 (296)
T 4hgt_A 168 ------------------------------------------P-YRENKNLTGTARYASINTHLGIEQSRRDDLESLGYV 204 (296)
T ss_dssp ------------------------------------------C-CCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHH
T ss_pred ------------------------------------------C-CCcccccCCCccccchHHhcCCCCCchhHHHHHHHH
Confidence 0 000012478999999999999999999999999999
Q ss_pred hhhccc---cCCCCchH--HHHHHHhhc---CCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHc
Q 004987 301 LFELFC---PFSTGEEK--TRTMSSLRH---RVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 301 L~eLlt---pf~~~~~~--~~~~~~i~~---~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
+|+|++ ||...... ...+..+.. ....+.....+ +...+|+.+||+.||.+|||+.++++
T Consensus 205 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~ 273 (296)
T 4hgt_A 205 LMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQ 273 (296)
T ss_dssp HHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHH
T ss_pred HHHHhcCCCCCcccchhhhhhhhhhhhcccccchhhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHH
Confidence 999999 66542111 011111111 11111222233 34559999999999999999999986
No 231
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=99.97 E-value=5.9e-31 Score=282.12 Aligned_cols=215 Identities=12% Similarity=0.107 Sum_probs=151.5
Q ss_pred eeeeehhhhcccCCCCCceecccceee-cCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004987 62 LRKHSDGVELTHGDHLRNQGGLSGVCE-NEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 62 ~r~~~e~~~L~~l~HpnIV~l~~~~~~-~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs 139 (720)
+..+.+...+..++||||+++++.+.. .......+|+|||| .+++|.+++.... .++..++.++.||+.||.|||+
T Consensus 52 ~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~i~~qi~~~L~~LH~ 129 (336)
T 3g2f_A 52 FINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHT--SDWVSSCRLAHSVTRGLAYLHT 129 (336)
T ss_dssp HHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEEECCCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhccCcchhhheecccccccCCCceEEEEEecCCCCcHHHHHhhcc--cchhHHHHHHHHHHHHHHHHHh
Confidence 344456666777999999999973322 22223357899999 7999999996543 5899999999999999999999
Q ss_pred c---------CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccccccc
Q 004987 140 Q---------GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDL 210 (720)
Q Consensus 140 ~---------gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Df 210 (720)
+ ||+||||||+|||++.++.+||+|||++........... ..
T Consensus 130 ~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG~a~~~~~~~~~~~----------------------------~~- 180 (336)
T 3g2f_A 130 ELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRP----------------------------GE- 180 (336)
T ss_dssp CBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCTTCEECSSSSCC---------------------------------
T ss_pred hhccccccccceeecccccceEEEcCCCcEEEeeccceeecccccccCc----------------------------cc-
Confidence 9 999999999999999999999999998854322110000 00
Q ss_pred ccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-----
Q 004987 211 QLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG----- 285 (720)
Q Consensus 211 gla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~----- 285 (720)
.........||+.|+|||++.+
T Consensus 181 -----------------------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~ 207 (336)
T 3g2f_A 181 -----------------------------------------------------EDNAAISEVGTIRYMAPEVLEGAVNLR 207 (336)
T ss_dssp ----------------------------------------------------------CCTTSCGGGCCHHHHTTCCCGG
T ss_pred -----------------------------------------------------cccccccCCCccceeCchhhcCCcccc
Confidence 0000112478999999999987
Q ss_pred --CCCCccccchhhhhhhhhccc---cCCCCch-----------------HHHHHHHhhcCCCCccccccCc-------h
Q 004987 286 --APVSCASDIYRLGVLLFELFC---PFSTGEE-----------------KTRTMSSLRHRVLPPQLLLKFP-------K 336 (720)
Q Consensus 286 --~~~s~~sDIwSLGvlL~eLlt---pf~~~~~-----------------~~~~~~~i~~~~~p~~~~~~~p-------~ 336 (720)
..++.++|||||||++|||++ ||.+... .......+......+.+...++ .
T Consensus 208 ~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (336)
T 3g2f_A 208 DXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRS 287 (336)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHH
T ss_pred cccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHH
Confidence 346789999999999999997 3322110 1111112222222233333222 3
Q ss_pred HHHHHHHcCCCCCCCCCChHHHHc
Q 004987 337 EASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 337 ~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
..+||.+||+.||.+|||+.|+++
T Consensus 288 l~~li~~cl~~dP~~Rps~~e~l~ 311 (336)
T 3g2f_A 288 LKETIEDCWDQDAEARLTAQXAEE 311 (336)
T ss_dssp HHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHhcCChhhCcchHHHHH
Confidence 569999999999999999999965
No 232
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=99.96 E-value=1.1e-30 Score=272.65 Aligned_cols=202 Identities=15% Similarity=0.151 Sum_probs=156.4
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004987 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~-~~l~~~~~~~i~~QIl~aL~~LHs~g 141 (720)
..+|..++.+++||||+++++ ++..+ .+++|||| .|++|.+++.... ..+++.+++.++.||+.||.|||++|
T Consensus 55 ~~~E~~~l~~l~h~~i~~~~~-~~~~~----~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ 129 (279)
T 1qpc_A 55 FLAEANLMKQLQHQRLVRLYA-VVTQE----PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 129 (279)
T ss_dssp HHHHHHHHHHCCCTTBCCEEE-EECSS----SCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhCCCcCcceEEE-EEcCC----CcEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 346778999999999999999 55433 46899999 7999999995432 25999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004987 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.++|+|||.+.........
T Consensus 130 i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-------------------------------------------- 165 (279)
T 1qpc_A 130 YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT-------------------------------------------- 165 (279)
T ss_dssp EECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEE--------------------------------------------
T ss_pred eeccCCCHhhEEEcCCCCEEECCCcccccccCcccc--------------------------------------------
Confidence 999999999999999999999988887432111000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004987 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGvlL 301 (720)
......+++.|+|||++.+..++.++|||||||++
T Consensus 166 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 200 (279)
T 1qpc_A 166 ---------------------------------------------AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 200 (279)
T ss_dssp ---------------------------------------------CCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHH
T ss_pred ---------------------------------------------cccCCCCccCccChhhhccCCCCchhhhHHHHHHH
Confidence 00013468899999999888899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004987 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~i~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||...... .....+.....+.......+...+|+.+||+.||.+|||+.++++
T Consensus 201 ~el~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~ 262 (279)
T 1qpc_A 201 TEIVTHGRIPYPGMTNP-EVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRS 262 (279)
T ss_dssp HHHHTTTCCSSTTCCHH-HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHhCCCCCCcccCHH-HHHHHHhcccCCCCcccccHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 99998 56554433 344444443322222223344559999999999999999999986
No 233
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=99.96 E-value=1e-30 Score=276.64 Aligned_cols=205 Identities=14% Similarity=0.146 Sum_probs=152.3
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC--CCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004987 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK--PKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~--~~~~l~~~~~~~i~~QIl~aL~~LHs 139 (720)
+..+|..++.+++||||+++++ ++.... .++++||| .|++|.+++.. ....+++..++.++.||+.||.|||+
T Consensus 76 ~~~~E~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~ 151 (307)
T 2nru_A 76 QFDQEIKVMAKCQHENLVELLG-FSSDGD---DLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHE 151 (307)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EECSSS---SCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCeEEEEE-EEecCC---ceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 3447888999999999999999 555443 56999999 89999999943 23459999999999999999999999
Q ss_pred cCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004987 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||+||||||+||+++.++.++|+|||.+...+.....
T Consensus 152 ~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~------------------------------------------ 189 (307)
T 2nru_A 152 NHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQT------------------------------------------ 189 (307)
T ss_dssp TTEECSCCCGGGEEECTTCCEEECCCTTCEECCSCSSC------------------------------------------
T ss_pred CCeecCCCCHHHEEEcCCCcEEEeeccccccccccccc------------------------------------------
Confidence 99999999999999999999999988887432111000
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhh
Q 004987 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
.......||+.|+|||++.+. ++.++|||||||
T Consensus 190 ----------------------------------------------~~~~~~~g~~~y~aPE~~~~~-~~~~~Dv~slG~ 222 (307)
T 2nru_A 190 ----------------------------------------------VMTSRIVGTTAYMAPEALRGE-ITPKSDIYSFGV 222 (307)
T ss_dssp ----------------------------------------------EECSSCCSCGGGCCHHHHTTE-ECTHHHHHHHHH
T ss_pred ----------------------------------------------ccccccCCCcCcCChHHhcCC-CCccchhHHHHH
Confidence 000114689999999998764 899999999999
Q ss_pred hhhhccc---cCCCCchH---HHHHHHhhc----------CCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004987 300 LLFELFC---PFSTGEEK---TRTMSSLRH----------RVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 300 lL~eLlt---pf~~~~~~---~~~~~~i~~----------~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
++|+|++ ||...... ......+.. ..+++......+...+|+.+||+.||.+|||+.++++
T Consensus 223 il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~ 299 (307)
T 2nru_A 223 VLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQ 299 (307)
T ss_dssp HHHHHHHCCCSBCTTBSSSBTTHHHHHHHTTSCCHHHHSCSSCSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred HHHHHHHCCCCcccCcchHHHHHHHHHhhhhhhhhhhhccccccccchHHHHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 9999999 55443211 111111111 1111111111123458999999999999999999986
No 234
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.96 E-value=6.3e-32 Score=284.78 Aligned_cols=207 Identities=12% Similarity=0.119 Sum_probs=137.3
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH------
Q 004987 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAH------ 138 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LH------ 138 (720)
.+......++||||+++++.+.........+++|||| .+++|.+++... .+++..++.++.||+.||.|||
T Consensus 46 ~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~i~~~l~~lH~~~~~~ 123 (303)
T 3gxj_A 46 AEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGT 123 (303)
T ss_dssp HHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEEEEECCTTCCHHHHHHHC--CBCC-CHHHHC-CHHHHHC-CCCCBCST
T ss_pred HHHHHHHhccCcceeeeeeecccCCCccceeEEEEeccCCCCHHHHHhcc--CcchHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 3333333489999999999444444443468999999 889999999554 3888999999999999999999
Q ss_pred --HcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCC
Q 004987 139 --SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 216 (720)
Q Consensus 139 --s~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~ 216 (720)
++||+||||||+|||++.++.+||+|||++......... .
T Consensus 124 ~~~~~ivH~Dlkp~Nil~~~~~~~kl~DFg~a~~~~~~~~~--------------------------------~------ 165 (303)
T 3gxj_A 124 QGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDT--------------------------------I------ 165 (303)
T ss_dssp TCBC-CCCSCCCGGGC-CCTTCCC-BCCCCC-CCEETTTTE--------------------------------E------
T ss_pred ccCCCEeeCcCCHHHeEECCCCCEEEeecCcceeccCCCcc--------------------------------c------
Confidence 999999999999999999999999988887432111000 0
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC------CCCc
Q 004987 217 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA------PVSC 290 (720)
Q Consensus 217 ~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~------~~s~ 290 (720)
........||+.|+|||++.+. .++.
T Consensus 166 ------------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~ 197 (303)
T 3gxj_A 166 ------------------------------------------------DIAPNHRVGTKRYMAPEVLDDSINMKHFESFK 197 (303)
T ss_dssp ------------------------------------------------SCC-----CCGGGCCHHHHTTCSCTTCHHHHH
T ss_pred ------------------------------------------------ccccCCCCcCccccCHhhhcCcccccccccCc
Confidence 0000114789999999999876 3457
Q ss_pred cccchhhhhhhhhcccc-------------CCCCc----hHHHHHHHhhcCCCCccccccC------chHHHHHHHcCCC
Q 004987 291 ASDIYRLGVLLFELFCP-------------FSTGE----EKTRTMSSLRHRVLPPQLLLKF------PKEASFCLWLLHP 347 (720)
Q Consensus 291 ~sDIwSLGvlL~eLltp-------------f~~~~----~~~~~~~~i~~~~~p~~~~~~~------p~~~~Li~~~L~~ 347 (720)
++|||||||++|||+++ |.... ........+......+.+...+ +...+|+.+||+.
T Consensus 198 ~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 277 (303)
T 3gxj_A 198 RADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYA 277 (303)
T ss_dssp HHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTCC-CCCCC-CHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCS
T ss_pred chhHHHHHHHHHHHHhcCCCccccceeeccccccCCCCccHHHHHHHHHHhhcCCCccccccchhhHHHHHHHHHHHhcc
Confidence 89999999999999974 21110 0112222232333333332211 1345999999999
Q ss_pred CCCCCCChHHHHc
Q 004987 348 EPSGRPKMGELLQ 360 (720)
Q Consensus 348 dP~~Rpta~eiL~ 360 (720)
||.+|||+.++++
T Consensus 278 dP~~Rps~~~i~~ 290 (303)
T 3gxj_A 278 NGAARLTALRIKK 290 (303)
T ss_dssp SGGGSCCHHHHHH
T ss_pred CcccCCCHHHHHH
Confidence 9999999999986
No 235
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=99.96 E-value=9.5e-31 Score=279.96 Aligned_cols=209 Identities=18% Similarity=0.139 Sum_probs=155.5
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004987 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~g 141 (720)
+..+|..++.+++||||+++++ ++.... ...+++|||| .+++|.+++......+++.+++.++.||+.||.|||++|
T Consensus 88 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ 165 (326)
T 2w1i_A 88 DFEREIEILKSLQHDNIVKYKG-VCYSAG-RRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR 165 (326)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEE-EECC-----CCEEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCeeeEEE-EEEecC-CCceEEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3447888999999999999999 443322 2257899999 789999999766566999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004987 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.++|+|||.+......... +
T Consensus 166 ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~~~~~--------------------------------~----------- 202 (326)
T 2w1i_A 166 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEY--------------------------------Y----------- 202 (326)
T ss_dssp EECSCCCGGGEEEEETTEEEECCCTTCEECCSSCSE--------------------------------E-----------
T ss_pred EeccCCCcceEEEcCCCcEEEecCcchhhccccccc--------------------------------c-----------
Confidence 999999999999999999999998887443211000 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004987 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGvlL 301 (720)
. ......++..|+|||++.+..++.++|||||||++
T Consensus 203 ------------------------~--------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 238 (326)
T 2w1i_A 203 ------------------------K--------------------VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVL 238 (326)
T ss_dssp ------------------------E--------------------CSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHH
T ss_pred ------------------------c--------------------cccCCCCceeEECchhhcCCCCCchhhHHHHHHHH
Confidence 0 00013567889999999988899999999999999
Q ss_pred hhccccCCCCchH------------------HHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004987 302 FELFCPFSTGEEK------------------TRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLltpf~~~~~~------------------~~~~~~i~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||+++..+.... ......+.....++......+...+||.+||..||.+|||+.|+++
T Consensus 239 ~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~ 315 (326)
T 2w1i_A 239 YELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL 315 (326)
T ss_dssp HHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 9999943222111 0111222222222222223344569999999999999999999985
No 236
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=99.96 E-value=3.4e-30 Score=270.82 Aligned_cols=211 Identities=18% Similarity=0.160 Sum_probs=155.6
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004987 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~gIv 143 (720)
..+|..++..+.|++++..+..+.... ..+++||||.+++|.+++......+++.+++.++.||+.||.|||++||+
T Consensus 51 ~~~e~~~l~~l~~~~~i~~~~~~~~~~---~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iv 127 (296)
T 3uzp_A 51 LHIESKIYKMMQGGVGIPTIRWCGAEG---DYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFI 127 (296)
T ss_dssp HHHHHHHHHHHTTSTTCCCEEEEEEET---TEEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHHHhhcCCCCCccccccCCC---CceEEEEEecCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 346777899999999888887343433 25799999999999999965556699999999999999999999999999
Q ss_pred eccCCCCcEEEc---cCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004987 144 VHNVRPSCFVMS---SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 144 HrDLKP~NILl~---~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||||||+|||++ .++.+||+|||.+........... .
T Consensus 128 H~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~------------------------------~---------- 167 (296)
T 3uzp_A 128 HRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQH------------------------------I---------- 167 (296)
T ss_dssp CSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCB------------------------------C----------
T ss_pred eCCCCHHHeEEecCCCCCeEEEeeCCCcccccccccccc------------------------------c----------
Confidence 999999999994 888999999988744322100000 0
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhh
Q 004987 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
. ........||+.|+|||++.+..++.++|||||||+
T Consensus 168 ------------------------------------------~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~i 204 (296)
T 3uzp_A 168 ------------------------------------------P-YRENKNLTGTARYASINTHLGIEQSRRDDLESLGYV 204 (296)
T ss_dssp ------------------------------------------C-CCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHH
T ss_pred ------------------------------------------c-cccccccccccccCChhhhcCCCCCcchhhHHHHHH
Confidence 0 000112478999999999999999999999999999
Q ss_pred hhhccc---cCCCCch--HHHHHHHhhc---CCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHc
Q 004987 301 LFELFC---PFSTGEE--KTRTMSSLRH---RVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 301 L~eLlt---pf~~~~~--~~~~~~~i~~---~~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
+|||++ ||..... ....+..+.. ....+.+...+| ...+|+.+||+.||.+|||+.++++
T Consensus 205 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~ 273 (296)
T 3uzp_A 205 LMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQ 273 (296)
T ss_dssp HHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHH
T ss_pred HHHHHhCCCCCCCcCchhhhhhhhhhcccccCCchHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHH
Confidence 999999 6654211 0011111111 111122223334 4459999999999999999999986
No 237
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=99.96 E-value=2.2e-30 Score=302.93 Aligned_cols=202 Identities=18% Similarity=0.164 Sum_probs=157.9
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004987 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~gI 142 (720)
..+|..++.+++|||||++++ ++..+ .+|+|||| .+++|.+++......+++..++.++.||+.||.|||++||
T Consensus 438 ~~~E~~~l~~l~HpnIv~l~~-~~~~~----~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~gi 512 (656)
T 2j0j_A 438 FLQEALTMRQFDHPHIVKLIG-VITEN----PVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRF 512 (656)
T ss_dssp HHHHHHHHHHCCCTTBCCEEE-EECSS----SCEEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhCCCCCCCeEEE-EEecC----ceEEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 347888999999999999999 55332 46899999 8899999996655569999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004987 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.+||+|||++.........
T Consensus 513 vHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~~~--------------------------------------------- 547 (656)
T 2j0j_A 513 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY--------------------------------------------- 547 (656)
T ss_dssp CCSCCSGGGEEEEETTEEEECCCCCCCSCCC-------------------------------------------------
T ss_pred cccccchHhEEEeCCCCEEEEecCCCeecCCCcce---------------------------------------------
Confidence 99999999999999999999988887433111000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004987 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGvlL~ 302 (720)
......+|+.|+|||++.+..++.++|||||||++|
T Consensus 548 --------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ 583 (656)
T 2j0j_A 548 --------------------------------------------KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMW 583 (656)
T ss_dssp --------------------------------------------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred --------------------------------------------eccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHH
Confidence 000135688999999999888999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004987 303 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~i~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
||++ ||...... .....+..+..++......+...+||.+||+.||.+|||+.++++
T Consensus 584 ellt~g~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~ 644 (656)
T 2j0j_A 584 EILMHGVKPFQGVKNN-DVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKA 644 (656)
T ss_dssp HHHTTSCCTTTTCCHH-HHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHcCCCCCCCCCHH-HHHHHHHcCCCCCCCccccHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 9996 66655443 344444444333332233345569999999999999999999985
No 238
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=99.96 E-value=3.6e-30 Score=273.75 Aligned_cols=217 Identities=12% Similarity=0.110 Sum_probs=156.5
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004987 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~---~~~~l~~~~~~~i~~QIl~aL~~LHs 139 (720)
..+|..++..++||||+++++.+.........+|+|||| .+++|.+++.. ....+++.+++.++.||+.||.|||+
T Consensus 73 ~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~ 152 (317)
T 2buj_A 73 AQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHA 152 (317)
T ss_dssp HHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 347788999999999999999444333334468999999 88899999943 45569999999999999999999999
Q ss_pred cCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004987 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||+||||||+|||++.++.++|+|||.+......... .
T Consensus 153 ~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~--------------------------------~--------- 191 (317)
T 2buj_A 153 KGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEG--------------------------------S--------- 191 (317)
T ss_dssp TTEECCCCCGGGEEECTTSCEEECCCSSCEESCEEEES--------------------------------H---------
T ss_pred CCcccCCCCHHHEEEcCCCCEEEEecCcchhccccccc--------------------------------c---------
Confidence 99999999999999999999999999877432110000 0
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC---CCccccchh
Q 004987 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP---VSCASDIYR 296 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~---~s~~sDIwS 296 (720)
...... .......||+.|+|||++.+.. ++.++||||
T Consensus 192 ----------------------~~~~~~------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~s 231 (317)
T 2buj_A 192 ----------------------RQALTL------------------QDWAAQRCTISYRAPELFSVQSHCVIDERTDVWS 231 (317)
T ss_dssp ----------------------HHHHHH------------------HHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHH
T ss_pred ----------------------cccccc------------------cccccccCCcccCCHhHhccCCCcCCCchhhHHH
Confidence 000000 0001146799999999997665 689999999
Q ss_pred hhhhhhhccccCCCCchHH----HHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004987 297 LGVLLFELFCPFSTGEEKT----RTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 297 LGvlL~eLltpf~~~~~~~----~~~~~i~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~h 361 (720)
|||++|||+++..+..... .....+......+......+...+||.+||+.||.+|||+.+++++
T Consensus 232 lG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 300 (317)
T 2buj_A 232 LGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQ 300 (317)
T ss_dssp HHHHHHHHHHSSCTTHHHHHTTSCHHHHHHCC--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHHhCCCChhhhhcccchhhHHhhccCCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHH
Confidence 9999999999443332110 1111222222222222333455699999999999999999999974
No 239
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=99.96 E-value=9.4e-31 Score=299.40 Aligned_cols=207 Identities=14% Similarity=0.133 Sum_probs=159.3
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004987 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~~LHs~gI 142 (720)
.+|..+|.+++|||||++++ ++... .+|+|||| .+++|.++|.. .+..+++.+++.|+.||+.||.|||++||
T Consensus 310 ~~E~~~l~~l~hpniv~~~~-~~~~~----~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~i 384 (535)
T 2h8h_A 310 LQEAQVMKKLRHEKLVQLYA-VVSEE----PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY 384 (535)
T ss_dssp HHHHHHHHHCCCTTBCCEEE-EECSS----SCEEEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhCCCCCEeeEEE-EEeec----cceEeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 46788999999999999999 55442 47999999 88999999943 23458999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004987 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
|||||||+|||++.++.+||+|||+++...... +
T Consensus 385 vHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~----------------------------------~------------ 418 (535)
T 2h8h_A 385 VHRDLRAANILVGENLVCKVADFGLARLIEDNE----------------------------------Y------------ 418 (535)
T ss_dssp CCSCCSGGGEEECGGGCEEECCTTSTTTCCCHH----------------------------------H------------
T ss_pred eCCCCCHhhEEEcCCCcEEEcccccceecCCCc----------------------------------e------------
Confidence 999999999999999999999888874321100 0
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004987 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGvlL~ 302 (720)
. ......++..|+|||++.+..++.++|||||||+||
T Consensus 419 ------------------------~-------------------~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~ 455 (535)
T 2h8h_A 419 ------------------------T-------------------ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLT 455 (535)
T ss_dssp ------------------------H-------------------TTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred ------------------------e-------------------cccCCcCcccccCHHHhccCCCCchhhHHHHHHHHH
Confidence 0 000024678899999999888999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc--CcccCC
Q 004987 303 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ--SEFLNE 366 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~i~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~--hp~~~~ 366 (720)
||++ ||...... .....+..+...+......+...+||.+||+.||++|||+.+|++ ..++..
T Consensus 456 el~t~g~~P~~~~~~~-~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~ 524 (535)
T 2h8h_A 456 ELTTKGRVPYPGMVNR-EVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 524 (535)
T ss_dssp HHTTTTCCSSTTCCHH-HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCC
T ss_pred HHHhCCCCCCCCCCHH-HHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhc
Confidence 9998 56554433 344444444333322223334559999999999999999999986 244443
No 240
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=99.96 E-value=5.3e-31 Score=290.14 Aligned_cols=203 Identities=15% Similarity=0.170 Sum_probs=151.4
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC--CCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004987 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP--KRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~--~~~l~~~~~~~i~~QIl~aL~~LHs~g 141 (720)
.+|..+|.+++|||||++++ ++.... ...+|+|||| .|++|.+++... ...+++.+++.++.||+.||.|||++|
T Consensus 55 ~~E~~~l~~l~hpnIv~~~~-~~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ 132 (396)
T 4eut_A 55 MREFEVLKKLNHKNIVKLFA-IEEETT-TRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG 132 (396)
T ss_dssp HHHHHHHHHCCCTTBCCEEE-EEECTT-TCCEEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhcCCCCCCeEEE-eeccCC-CCeeEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 37888999999999999999 554433 3367999999 799999999543 223999999999999999999999999
Q ss_pred ceeccCCCCcEEE----ccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCC
Q 004987 142 IVVHNVRPSCFVM----SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 142 IvHrDLKP~NILl----~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~ 217 (720)
|+||||||+|||+ +..+.+||+|||.+.......
T Consensus 133 ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~~~------------------------------------------ 170 (396)
T 4eut_A 133 IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE------------------------------------------ 170 (396)
T ss_dssp EECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCCGG------------------------------------------
T ss_pred EEECCcCHHHEEEeecCCCceeEEEecCCCceEccCCC------------------------------------------
Confidence 9999999999999 667779998888773321110
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC--------CCCC
Q 004987 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG--------APVS 289 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~--------~~~s 289 (720)
......||+.|+|||++.+ ..++
T Consensus 171 -------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~ 201 (396)
T 4eut_A 171 -------------------------------------------------QFVSLYGTEEYLHPDMYERAVLRKDHQKKYG 201 (396)
T ss_dssp -------------------------------------------------GSSCSSSCCTTCCHHHHHHHCC--CHHHHHH
T ss_pred -------------------------------------------------ccccccCCccccCHHHhhccccccccccCCC
Confidence 0011468999999999865 4578
Q ss_pred ccccchhhhhhhhhccc---cCCCC---chHHHHHHHhhcCCCCccc-----------------------cccCc-hHHH
Q 004987 290 CASDIYRLGVLLFELFC---PFSTG---EEKTRTMSSLRHRVLPPQL-----------------------LLKFP-KEAS 339 (720)
Q Consensus 290 ~~sDIwSLGvlL~eLlt---pf~~~---~~~~~~~~~i~~~~~p~~~-----------------------~~~~p-~~~~ 339 (720)
.++|||||||++|||++ ||.+. ......+..+..+..+..+ ....+ ...+
T Consensus 202 ~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 281 (396)
T 4eut_A 202 ATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTP 281 (396)
T ss_dssp HHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchH
Confidence 89999999999999999 55432 2223344444433222110 01111 2348
Q ss_pred HHHHcCCCCCCCCCChHHHHc
Q 004987 340 FCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 340 Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|+.+||..||++||++.++++
T Consensus 282 ll~~~L~~dP~~R~s~~e~l~ 302 (396)
T 4eut_A 282 VLANILEADQEKCWGFDQFFA 302 (396)
T ss_dssp HHHHHSCCCTTTSCCHHHHHH
T ss_pred HHHHhhccChhhhccHHHHHH
Confidence 999999999999999999865
No 241
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=99.96 E-value=2.7e-30 Score=276.25 Aligned_cols=215 Identities=18% Similarity=0.246 Sum_probs=139.0
Q ss_pred eehhhhcccCC-CCCceecccceeec----CCCCCcEEEEEecCCCCHHHHHhC--CCCCCCHHHHHHHHHHHHHHHHHH
Q 004987 65 HSDGVELTHGD-HLRNQGGLSGVCEN----EAAIDPFVHAIEWGDVSLRQWLDK--PKRSVDVYECLHIFRQIVEIVYAA 137 (720)
Q Consensus 65 ~~e~~~L~~l~-HpnIV~l~~~~~~~----~~~~~~~~lV~E~~g~sL~~~L~~--~~~~l~~~~~~~i~~QIl~aL~~L 137 (720)
.+|..++.++. ||||+++++.+... ......++++|||.+++|.+++.. ....+++.+++.++.||+.||.||
T Consensus 73 ~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~L 152 (337)
T 3ll6_A 73 IQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHM 152 (337)
T ss_dssp HHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEEEEEEEECCSEEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccCCChhhccccccccccccccCCceEEEEEEecCCCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHH
Confidence 36777888885 99999999944221 123335899999977899999843 344599999999999999999999
Q ss_pred HHcC--ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccC
Q 004987 138 HSQG--IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 215 (720)
Q Consensus 138 Hs~g--IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~ 215 (720)
|++| |+||||||+|||++.++.+||+|||.+...+..... .+ ..
T Consensus 153 H~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~-------------------------------~~--~~- 198 (337)
T 3ll6_A 153 HRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDY-------------------------------SW--SA- 198 (337)
T ss_dssp HTSSSCCBCCCCCGGGCEECTTSCEEBCCCTTCBCCSSCC----------------------------------------
T ss_pred HhCCCCEEEccCCcccEEECCCCCEEEecCccceeccccCcc-------------------------------cc--cc-
Confidence 9999 999999999999999999999999988554322100 00 00
Q ss_pred CCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccc---cCCCCCccc
Q 004987 216 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEEL---AGAPVSCAS 292 (720)
Q Consensus 216 ~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l---~~~~~s~~s 292 (720)
.............||+.|+|||++ .+..++.++
T Consensus 199 --------------------------------------------~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~ 234 (337)
T 3ll6_A 199 --------------------------------------------QRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQ 234 (337)
T ss_dssp ---------------------------------------------------------------------CCTTSCSSHHH
T ss_pred --------------------------------------------cccccchhhccccCCCCcCChhhhhccccCCCChHH
Confidence 000000001124689999999998 555689999
Q ss_pred cchhhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004987 293 DIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 293 DIwSLGvlL~eLlt---pf~~~~~~~~~~~~i~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~h 361 (720)
|||||||++|+|++ ||...... ..+......+......+...+|+.+||++||.+|||+.|++++
T Consensus 235 Dv~slG~il~el~~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 302 (337)
T 3ll6_A 235 DIWALGCILYLLCFRQHPFEDGAKL----RIVNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQ 302 (337)
T ss_dssp HHHHHHHHHHHHHHSSCCC----------------CCCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred hHHHHHHHHHHHHhCCCCCcchhHH----HhhcCcccCCcccccchHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 99999999999999 55432221 1111111122222333455699999999999999999999974
No 242
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=99.96 E-value=1.9e-30 Score=280.71 Aligned_cols=212 Identities=11% Similarity=0.033 Sum_probs=153.5
Q ss_pred eeehhhhcccCCCCCceecccc--------------eeecCCCCCcEEEEEecCCCCHHHHHhCC-CCCCCHHHHHHHHH
Q 004987 64 KHSDGVELTHGDHLRNQGGLSG--------------VCENEAAIDPFVHAIEWGDVSLRQWLDKP-KRSVDVYECLHIFR 128 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~--------------~~~~~~~~~~~~lV~E~~g~sL~~~L~~~-~~~l~~~~~~~i~~ 128 (720)
..+|..++.+++|||||++++. ++.. ....+|+||||.|++|.+++... ...+++.+++.++.
T Consensus 89 ~~~E~~~l~~l~h~niv~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~ 166 (352)
T 2jii_A 89 LFNEQNFFQRAAKPLQVNKWKKLYSTPLLAIPTCMGFGVH--QDKYRFLVLPSLGRSLQSALDVSPKHVLSERSVLQVAC 166 (352)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHTTCTTCSCCCCCEEEEE--TTTEEEEEEECCCEEHHHHHHHSGGGCCCHHHHHHHHH
T ss_pred HHHHHHHHHHhcccchhhhhhhhccCCccCccchhhcccc--CCcEEEEEecCCCcCHHHHHHhCCcCCCCHHHHHHHHH
Confidence 3367789999999999985431 2222 12368999999999999999543 35599999999999
Q ss_pred HHHHHHHHHHHcCceeccCCCCcEEEccCC--ceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccc
Q 004987 129 QIVEIVYAAHSQGIVVHNVRPSCFVMSSFN--HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLR 206 (720)
Q Consensus 129 QIl~aL~~LHs~gIvHrDLKP~NILl~~~~--~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~ 206 (720)
||+.||.|||++||+||||||+|||++.++ .++|+|||++.........
T Consensus 167 qi~~~L~~LH~~~ivH~Dikp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~----------------------------- 217 (352)
T 2jii_A 167 RLLDALEFLHENEYVHGNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKH----------------------------- 217 (352)
T ss_dssp HHHHHHHHHHHTTCBCSCCCGGGEEEETTEEEEEEECCGGGCBCSSGGGCC-----------------------------
T ss_pred HHHHHHHHHHhCCccCCCCCHHHEEEcCCCCceEEEecCcceeeccCCCcc-----------------------------
Confidence 999999999999999999999999999888 8999988887543211000
Q ss_pred ccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC
Q 004987 207 REDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA 286 (720)
Q Consensus 207 l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~ 286 (720)
..+ .........||+.|+|||++.+.
T Consensus 218 -~~~-----------------------------------------------------~~~~~~~~~gt~~y~aPE~~~~~ 243 (352)
T 2jii_A 218 -VAY-----------------------------------------------------VEGSRSPHEGDLEFISMDLHKGC 243 (352)
T ss_dssp -CCC-----------------------------------------------------CTTSSCTTCSCTTTCCHHHHTTC
T ss_pred -ccc-----------------------------------------------------cccccccccCCccccCHHHHccC
Confidence 000 00000124789999999999998
Q ss_pred CCCccccchhhhhhhhhccc---cCCCCc-hHHHHHHHhh--cCCCCccc------cccCchHHHHHHHcCCCCCCCCCC
Q 004987 287 PVSCASDIYRLGVLLFELFC---PFSTGE-EKTRTMSSLR--HRVLPPQL------LLKFPKEASFCLWLLHPEPSGRPK 354 (720)
Q Consensus 287 ~~s~~sDIwSLGvlL~eLlt---pf~~~~-~~~~~~~~i~--~~~~p~~~------~~~~p~~~~Li~~~L~~dP~~Rpt 354 (720)
.++.++|||||||++|||++ ||.... .......... ....++.. ....+...+|+.+||..||.+||+
T Consensus 244 ~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps 323 (352)
T 2jii_A 244 GPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNTEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPP 323 (352)
T ss_dssp CCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCC
T ss_pred CCCchhhHHHHHHHHHHHHhCCCCcccCCcCHHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCC
Confidence 89999999999999999999 555432 1111211111 11111111 112345569999999999999999
Q ss_pred hHHHHc
Q 004987 355 MGELLQ 360 (720)
Q Consensus 355 a~eiL~ 360 (720)
+.++++
T Consensus 324 ~~~l~~ 329 (352)
T 2jii_A 324 YAMLRN 329 (352)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999986
No 243
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.96 E-value=5.1e-31 Score=292.00 Aligned_cols=175 Identities=13% Similarity=0.141 Sum_probs=134.8
Q ss_pred CCcEEEEEecCCCCHHHHHh------CCCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccC
Q 004987 93 IDPFVHAIEWGDVSLRQWLD------KPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESA 166 (720)
Q Consensus 93 ~~~~~lV~E~~g~sL~~~L~------~~~~~l~~~~~~~i~~QIl~aL~~LHs~gIvHrDLKP~NILl~~~~~vkliDfg 166 (720)
...++++|++.+++|.++++ .....+++..++.++.||+.||.|||++|||||||||+|||++.++.+||+|||
T Consensus 177 ~~~~~~~~~~~~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiHrDiKp~NILl~~~~~~kL~DFG 256 (413)
T 3dzo_A 177 VLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFE 256 (413)
T ss_dssp CCSEEEEEECCSEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCGG
T ss_pred ccceEEEeehhcCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcccceEEEecCCeEEEEecc
Confidence 34578999998899999983 234457888999999999999999999999999999999999999999998888
Q ss_pred cccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccCCCcccccccccccccccc
Q 004987 167 SCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHK 246 (720)
Q Consensus 167 ~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~ 246 (720)
+++..+..
T Consensus 257 ~a~~~~~~------------------------------------------------------------------------ 264 (413)
T 3dzo_A 257 HLVRDGAS------------------------------------------------------------------------ 264 (413)
T ss_dssp GCEETTEE------------------------------------------------------------------------
T ss_pred ceeecCCc------------------------------------------------------------------------
Confidence 76321100
Q ss_pred ccccccchhhhhcccCCCCccccccccCCcccCCccc----------cCCCCCccccchhhhhhhhhccc---cCCCCch
Q 004987 247 ILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEEL----------AGAPVSCASDIYRLGVLLFELFC---PFSTGEE 313 (720)
Q Consensus 247 ~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l----------~~~~~s~~sDIwSLGvlL~eLlt---pf~~~~~ 313 (720)
....+| +.|+|||++ .+..++.++|||||||++|||++ ||.....
T Consensus 265 ---------------------~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~ 322 (413)
T 3dzo_A 265 ---------------------AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAA 322 (413)
T ss_dssp ---------------------ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCCCCTTGG
T ss_pred ---------------------cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCCCCCcch
Confidence 011467 999999999 55558999999999999999999 6654432
Q ss_pred HHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004987 314 KTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 314 ~~~~~~~i~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
.. ....+ ++. .....+...+||.+||++||.+||++.++|+||||+..
T Consensus 323 ~~-~~~~~----~~~-~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~~~~~~~~ 370 (413)
T 3dzo_A 323 LG-GSEWI----FRS-CKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQL 370 (413)
T ss_dssp GS-CSGGG----GSS-CCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred hh-hHHHH----Hhh-cccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHHHH
Confidence 21 11111 110 01122445599999999999999999999999998764
No 244
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=99.96 E-value=4.8e-30 Score=275.54 Aligned_cols=207 Identities=12% Similarity=0.121 Sum_probs=150.9
Q ss_pred ehhhhccc--CCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH----
Q 004987 66 SDGVELTH--GDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAH---- 138 (720)
Q Consensus 66 ~e~~~L~~--l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LH---- 138 (720)
+|..++.. ++||||+++++.+.........+|+|||| .+++|.+++.+. .+++.+++.++.||+.||.|||
T Consensus 83 ~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~ 160 (342)
T 1b6c_B 83 REAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIV 160 (342)
T ss_dssp HHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBC
T ss_pred HHHHHHHHhhcCCCcEEEEEeeecccCCccceeEEEEeecCCCcHHHHHhcc--CccHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34444444 89999999999444444333478999999 888999999653 4899999999999999999999
Q ss_pred ----HcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccccccccccc
Q 004987 139 ----SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVT 214 (720)
Q Consensus 139 ----s~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~ 214 (720)
++||+||||||+|||++.++.+||+|||++......... .
T Consensus 161 ~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~--------------------------------~---- 204 (342)
T 1b6c_B 161 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDT--------------------------------I---- 204 (342)
T ss_dssp STTCBCEEECSCCSGGGEEECTTSCEEECCCTTCEEEETTTTE--------------------------------E----
T ss_pred hhcccCCeeeCCCCHHHEEECCCCCEEEEECCCceeccccccc--------------------------------c----
Confidence 899999999999999999999999998887432111000 0
Q ss_pred CCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC------C
Q 004987 215 APTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP------V 288 (720)
Q Consensus 215 ~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~------~ 288 (720)
. .......||+.|+|||++.+.. +
T Consensus 205 -------------------------------~-------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 234 (342)
T 1b6c_B 205 -------------------------------D-------------------IAPNHRVGTKRYMAPEVLDDSINMKHFES 234 (342)
T ss_dssp -------------------------------E-------------------ECCCSCCCCGGGCCHHHHTSCCCTTCHHH
T ss_pred -------------------------------c-------------------cccccCCcCcccCCHhhhccccccccccc
Confidence 0 0001146899999999998763 3
Q ss_pred Cccccchhhhhhhhhcccc-------------CCCC----chHHHHHHHhhcCCCCccccccC------chHHHHHHHcC
Q 004987 289 SCASDIYRLGVLLFELFCP-------------FSTG----EEKTRTMSSLRHRVLPPQLLLKF------PKEASFCLWLL 345 (720)
Q Consensus 289 s~~sDIwSLGvlL~eLltp-------------f~~~----~~~~~~~~~i~~~~~p~~~~~~~------p~~~~Li~~~L 345 (720)
+.++|||||||++|||+++ |... .........+......+.+...+ +...+|+.+||
T Consensus 235 ~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 314 (342)
T 1b6c_B 235 FKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECW 314 (342)
T ss_dssp HHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHC
T ss_pred CCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCcccHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHh
Confidence 4789999999999999973 3221 11223333343333333333221 23459999999
Q ss_pred CCCCCCCCChHHHHc
Q 004987 346 HPEPSGRPKMGELLQ 360 (720)
Q Consensus 346 ~~dP~~Rpta~eiL~ 360 (720)
+.||.+|||+.++++
T Consensus 315 ~~dp~~Rps~~~i~~ 329 (342)
T 1b6c_B 315 YANGAARLTALRIKK 329 (342)
T ss_dssp CSSGGGSCCHHHHHH
T ss_pred ccChhhCCCHHHHHH
Confidence 999999999999986
No 245
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=99.96 E-value=5.5e-30 Score=278.59 Aligned_cols=200 Identities=11% Similarity=0.042 Sum_probs=142.3
Q ss_pred ehhhhcccCC---CCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC----CCCCCCHHHHHHHHHHHHHHHHHH
Q 004987 66 SDGVELTHGD---HLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK----PKRSVDVYECLHIFRQIVEIVYAA 137 (720)
Q Consensus 66 ~e~~~L~~l~---HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~----~~~~l~~~~~~~i~~QIl~aL~~L 137 (720)
+|..++..+. |+||+++++ ++.... ..|+|||| .|++|.+++.. ....+++.+++.|+.||+.||.||
T Consensus 113 ~e~~~~~~l~~~~~~~iv~~~~-~~~~~~---~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~l 188 (365)
T 3e7e_A 113 IGTQLMERLKPSMQHMFMKFYS-AHLFQN---GSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQV 188 (365)
T ss_dssp HHHHHHHHSCGGGGGGBCCEEE-EEECSS---CEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhhhhhhhhhhhe-eeecCC---CcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHH
Confidence 3344444444 999999999 444443 57999999 89999999953 345699999999999999999999
Q ss_pred HHcCceeccCCCCcEEEcc-----------CCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccc
Q 004987 138 HSQGIVVHNVRPSCFVMSS-----------FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLR 206 (720)
Q Consensus 138 Hs~gIvHrDLKP~NILl~~-----------~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~ 206 (720)
|++|||||||||+|||++. ++.+||+|||++........
T Consensus 189 H~~~ivHrDiKp~NIll~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~------------------------------ 238 (365)
T 3e7e_A 189 HDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPK------------------------------ 238 (365)
T ss_dssp HTTTEECCCCSGGGEEECGGGTCC------CTTEEECCCTTCEEGGGSCT------------------------------
T ss_pred hhCCeecCCCCHHHEEecccccCccccccccCCEEEeeCchhhhhhccCC------------------------------
Confidence 9999999999999999998 88999988888733210000
Q ss_pred ccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC
Q 004987 207 REDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA 286 (720)
Q Consensus 207 l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~ 286 (720)
.......+||+.|+|||++.+.
T Consensus 239 ----------------------------------------------------------~~~~~~~~gt~~y~aPE~~~~~ 260 (365)
T 3e7e_A 239 ----------------------------------------------------------GTIFTAKCETSGFQCVEMLSNK 260 (365)
T ss_dssp ----------------------------------------------------------TEEECCSSCTTSCCCHHHHTTC
T ss_pred ----------------------------------------------------------CceeeeecCCCCCCChHHhcCC
Confidence 0000124789999999999999
Q ss_pred CCCccccchhhhhhhhhccccCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004987 287 PVSCASDIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 287 ~~s~~sDIwSLGvlL~eLltpf~~~~~~~~~~~~i~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
.++.++|||||||++|||+++..+......... .....++.. ...+...+++..||+.+|.+|++..+.|.
T Consensus 261 ~~~~~~DiwslG~il~elltg~~pf~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~l~~~p~~r~~~~~~l~ 331 (365)
T 3e7e_A 261 PWNYQIDYFGVAATVYCMLFGTYMKVKNEGGEC-KPEGLFRRL--PHLDMWNEFFHVMLNIPDCHHLPSLDLLR 331 (365)
T ss_dssp CBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEE-EECSCCTTC--SSHHHHHHHHHHHHCCCCTTCCCCHHHHH
T ss_pred CCCccccHHHHHHHHHHHHhCCCccccCCCCce-eechhcccc--CcHHHHHHHHHHHcCCCCCCcchHHHHHH
Confidence 999999999999999999994332211100000 001111111 11123348999999999999965444443
No 246
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=99.96 E-value=3.8e-29 Score=264.16 Aligned_cols=190 Identities=16% Similarity=0.211 Sum_probs=139.2
Q ss_pred ehhhhc-ccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004987 66 SDGVEL-THGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 66 ~e~~~L-~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~~LHs~gI 142 (720)
+|..++ ..++||||+++++.+.........+|+|||| .|++|.+++... ...+++.+++.++.||+.||.|||++||
T Consensus 59 ~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i 138 (299)
T 3m2w_A 59 REVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 138 (299)
T ss_dssp HHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 455555 5579999999999433322223368999999 788999999543 3469999999999999999999999999
Q ss_pred eeccCCCCcEEEcc---CCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004987 143 VVHNVRPSCFVMSS---FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 143 vHrDLKP~NILl~~---~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||||||+|||++. ++.++|+|||++...
T Consensus 139 ~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~------------------------------------------------ 170 (299)
T 3m2w_A 139 AHRDVKPENLLYTSKRPNAILKLTDFGFAKET------------------------------------------------ 170 (299)
T ss_dssp ECCCCSGGGEEESSSSTTCCEEECCCTTCEEC------------------------------------------------
T ss_pred ccCCCCHHHEEEecCCCCCcEEEecccccccc------------------------------------------------
Confidence 99999999999997 788999777765110
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhh
Q 004987 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
.+..++.++|||||||
T Consensus 171 ----------------------------------------------------------------~~~~~~~~~DiwslG~ 186 (299)
T 3m2w_A 171 ----------------------------------------------------------------TGEKYDKSCDMWSLGV 186 (299)
T ss_dssp ----------------------------------------------------------------TTCGGGGHHHHHHHHH
T ss_pred ----------------------------------------------------------------ccccCCchhhHHHHHH
Confidence 0123688999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcC------CCCccc-cccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004987 300 LLFELFC---PFSTGEEKTRTMSSLRHR------VLPPQL-LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 300 lL~eLlt---pf~~~~~~~~~~~~i~~~------~~p~~~-~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
++|||++ ||....... ....+... .++... ....+...+||.+||+.||.+|||+.|+|+||||....
T Consensus 187 il~el~tg~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~hp~~~~~~ 264 (299)
T 3m2w_A 187 IMYILLCGYPPFYSNHGLA-ISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST 264 (299)
T ss_dssp HHHHHHHSSCSCCC--------CCSCCSSCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTGG
T ss_pred HHHHHHHCCCCCCCCcchh-hhHHHHHHHhhccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcChhhcccc
Confidence 9999999 554432211 11111111 111111 12334455999999999999999999999999998763
No 247
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.96 E-value=5.6e-30 Score=301.42 Aligned_cols=198 Identities=19% Similarity=0.233 Sum_probs=148.2
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCc-EEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004987 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDP-FVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~-~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~ 140 (720)
+..+|..+|.+++|||||++++.+......... +|+|||| .|++|.+++.. .+++.+++.|+.||+.||.|||++
T Consensus 125 ~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~~lv~E~~~g~~L~~~~~~---~l~~~~~~~~~~qi~~aL~~lH~~ 201 (681)
T 2pzi_A 125 MAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQ---KLPVAEAIAYLLEILPALSYLHSI 201 (681)
T ss_dssp HHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEEEEEEECCCCEECC----C---CCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCceeEEEEEeCCCCcHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHC
Confidence 344788899999999999999944433332222 6999999 89999998744 599999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004987 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
|||||||||+|||++. +.+||+|||+++.....
T Consensus 202 giiHrDlkp~NIll~~-~~~kl~DFG~a~~~~~~---------------------------------------------- 234 (681)
T 2pzi_A 202 GLVYNDLKPENIMLTE-EQLKLIDLGAVSRINSF---------------------------------------------- 234 (681)
T ss_dssp TEECCCCSGGGEEECS-SCEEECCCTTCEETTCC----------------------------------------------
T ss_pred CCeecccChHHeEEeC-CcEEEEecccchhcccC----------------------------------------------
Confidence 9999999999999987 48999888876322100
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhh
Q 004987 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
....||+.|+|||++.+. ++.++|||||||+
T Consensus 235 ------------------------------------------------~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~ 265 (681)
T 2pzi_A 235 ------------------------------------------------GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRT 265 (681)
T ss_dssp ------------------------------------------------SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHH
T ss_pred ------------------------------------------------CccCCCccccCHHHHcCC-CCCceehhhhHHH
Confidence 014689999999999776 4899999999999
Q ss_pred hhhccccCCCCchHHHHHHHhhcCCCC-ccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccC
Q 004987 301 LFELFCPFSTGEEKTRTMSSLRHRVLP-PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLN 365 (720)
Q Consensus 301 L~eLltpf~~~~~~~~~~~~i~~~~~p-~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~ 365 (720)
+|+|++++.+.... ....... .......+...+||.+||++||.+||++.+.+.|+|+.
T Consensus 266 l~~l~~g~~~~~~~------~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~ 325 (681)
T 2pzi_A 266 LAALTLDLPTRNGR------YVDGLPEDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTG 325 (681)
T ss_dssp HHHHHSCCCEETTE------ECSSCCTTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred HHHHHhCCCCCccc------ccccccccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHH
Confidence 99999965543221 0111111 11112234556999999999999999988888877753
No 248
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=99.96 E-value=3.1e-29 Score=282.61 Aligned_cols=211 Identities=18% Similarity=0.177 Sum_probs=154.9
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004987 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~gIv 143 (720)
..+|..++..+.|++++..+..+.... ...++||||.|++|.+++......+++.+++.|+.||+.||.|||++|||
T Consensus 49 ~~~E~~il~~L~~~~~i~~i~~~~~~~---~~~~lvme~~g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIv 125 (483)
T 3sv0_A 49 LLYESKIYRILQGGTGIPNVRWFGVEG---DYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFL 125 (483)
T ss_dssp HHHHHHHHHHTTTSTTCCCEEEEEEET---TEEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHHHhcCCCCCCeEEEEEeeC---CEEEEEEECCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCEe
Confidence 346677888888877666665344333 36799999999999999975556699999999999999999999999999
Q ss_pred eccCCCCcEEE---ccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004987 144 VHNVRPSCFVM---SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 144 HrDLKP~NILl---~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||||||+|||| +.++.+||+|||++........... .
T Consensus 126 HrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~------------------------------~---------- 165 (483)
T 3sv0_A 126 HRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQH------------------------------I---------- 165 (483)
T ss_dssp CCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCB------------------------------C----------
T ss_pred ecccCcceEEEecCCCCCeEEEEeCCcceeccCCccccc------------------------------c----------
Confidence 99999999999 5889999999998854322110000 0
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhh
Q 004987 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
. ........||+.|+|||++.+..++.++|||||||+
T Consensus 166 ------------------------------------------~-~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvi 202 (483)
T 3sv0_A 166 ------------------------------------------P-YRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYV 202 (483)
T ss_dssp ------------------------------------------C-CCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHH
T ss_pred ------------------------------------------c-cccccccCCCccccCHHHhcCCCCChHHHHHHHHHH
Confidence 0 000012578999999999999999999999999999
Q ss_pred hhhccc---cCCCCch--HHHHHHHhhcC---CCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHc
Q 004987 301 LFELFC---PFSTGEE--KTRTMSSLRHR---VLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 301 L~eLlt---pf~~~~~--~~~~~~~i~~~---~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
||||++ ||..... ....+..+... ...+.+...+| ...+|+.+||+.||.+||++.+|++
T Consensus 203 l~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~ 271 (483)
T 3sv0_A 203 LMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKR 271 (483)
T ss_dssp HHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCHHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred HHHHHhCCCCCccccchhHHHHHHHHhhccccccHHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 999999 6654321 11222222211 11122223334 4459999999999999999998875
No 249
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.95 E-value=2.2e-29 Score=270.48 Aligned_cols=170 Identities=12% Similarity=0.073 Sum_probs=123.7
Q ss_pred CCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH-HcCceeccCCCCcEEEccCC------------
Q 004987 93 IDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAH-SQGIVVHNVRPSCFVMSSFN------------ 158 (720)
Q Consensus 93 ~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LH-s~gIvHrDLKP~NILl~~~~------------ 158 (720)
...+|+|||| .+++|.+.+.+ ..+++.+++.|+.||+.||.||| ++||+||||||+|||++.++
T Consensus 134 ~~~~~lv~E~~~~g~ll~~~~~--~~~~~~~~~~i~~qi~~aL~~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~ 211 (336)
T 2vuw_A 134 DDQLFIVLEFEFGGIDLEQMRT--KLSSLATAKSILHQLTASLAVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKS 211 (336)
T ss_dssp TTCEEEEEEEECCCEETGGGTT--TCCCHHHHHHHHHHHHHHHHHHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEE
T ss_pred cCeEEEEEEecCCCccHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHhCCEeECCCCHHHEEEeccCCcceeeeccCcc
Confidence 3478999999 78876666633 34899999999999999999999 99999999999999999876
Q ss_pred --------ceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccCCC
Q 004987 159 --------HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSS 230 (720)
Q Consensus 159 --------~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~ 230 (720)
.+||+|||++ +....
T Consensus 212 ~~~~~~~~~vkL~DFG~a---------------------------------------------~~~~~------------ 234 (336)
T 2vuw_A 212 STIPSCGLQVSIIDYTLS---------------------------------------------RLERD------------ 234 (336)
T ss_dssp EEEECTTEEEEECCCTTC---------------------------------------------BEEET------------
T ss_pred ccccCCCceEEEeecccc---------------------------------------------EecCC------------
Confidence 5666555554 31100
Q ss_pred ccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhh-hhhccccCC
Q 004987 231 AYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL-LFELFCPFS 309 (720)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGvl-L~eLltpf~ 309 (720)
...+||+.|+|||++.+.. +.++||||||++ .+++++++.
T Consensus 235 --------------------------------------~~~~gt~~y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~ 275 (336)
T 2vuw_A 235 --------------------------------------GIVVFCDVSMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYH 275 (336)
T ss_dssp --------------------------------------TEEECCCCTTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCC
T ss_pred --------------------------------------CcEEEeecccChhhhcCCC-ccceehhhhhCCCCcccccccC
Confidence 0137899999999999876 899999998777 777887665
Q ss_pred CCchH---HHHHHHhh-cCC----CCccccc-cCchHHHHHHHcCCCCCCCCCChHHHH-cCcccC
Q 004987 310 TGEEK---TRTMSSLR-HRV----LPPQLLL-KFPKEASFCLWLLHPEPSGRPKMGELL-QSEFLN 365 (720)
Q Consensus 310 ~~~~~---~~~~~~i~-~~~----~p~~~~~-~~p~~~~Li~~~L~~dP~~Rpta~eiL-~hp~~~ 365 (720)
+.... ......+. ... .++.... ..+...+||.+||++| |+.|+| +||||+
T Consensus 276 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~d-----sa~e~l~~Hp~f~ 336 (336)
T 2vuw_A 276 PYSNVLWLHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRTMLNFS-----SATDLLCQHSLFK 336 (336)
T ss_dssp THHHHHHHHHHHHHHHHTCCCSSCCCSHHHHHHHHHHHHHHHHGGGSS-----SHHHHHHHCGGGC
T ss_pred CCcchhhhhHHHHhhhhhhccCcccchhhhhhcCHHHHHHHHHHhccC-----CHHHHHhcCCCcC
Confidence 54331 11222222 111 1122222 2234459999999977 999999 999995
No 250
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=99.94 E-value=1.3e-27 Score=251.37 Aligned_cols=173 Identities=17% Similarity=0.167 Sum_probs=131.9
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004987 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~g 141 (720)
+..+|..++.+++||||+++++ ++.... .+|+|||| .|++|.++++. + ....++..|+.||+.||.|||++|
T Consensus 77 ~~~~e~~~l~~l~hp~iv~~~~-~~~~~~---~~~lv~e~~~g~~L~~~l~~-~--~~~~~~~~i~~ql~~aL~~lH~~g 149 (286)
T 3uqc_A 77 ETLSRTLRLSRIDKPGVARVLD-VVHTRA---GGLVVAEWIRGGSLQEVADT-S--PSPVGAIRAMQSLAAAADAAHRAG 149 (286)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEE-EEEETT---EEEEEEECCCEEEHHHHHTT-C--CCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhcCCCCCcceeeE-EEEECC---cEEEEEEecCCCCHHHHHhc-C--CChHHHHHHHHHHHHHHHHHHHCC
Confidence 3447777899999999999999 554443 57999999 88999999943 2 466688999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004987 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.+|.++|+
T Consensus 150 ivH~Dikp~NIll~~~g~~kl~---------------------------------------------------------- 171 (286)
T 3uqc_A 150 VALSIDHPSRVRVSIDGDVVLA---------------------------------------------------------- 171 (286)
T ss_dssp CCCCCCSGGGEEEETTSCEEEC----------------------------------------------------------
T ss_pred CccCCCCcccEEEcCCCCEEEE----------------------------------------------------------
Confidence 9999999999999999988883
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004987 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGvlL 301 (720)
++.|++| ++.++|||||||++
T Consensus 172 ----------------------------------------------------~~~~~~~-------~~~~~Di~slG~il 192 (286)
T 3uqc_A 172 ----------------------------------------------------YPATMPD-------ANPQDDIRGIGASL 192 (286)
T ss_dssp ----------------------------------------------------SCCCCTT-------CCHHHHHHHHHHHH
T ss_pred ----------------------------------------------------eccccCC-------CCchhHHHHHHHHH
Confidence 2234443 78999999999999
Q ss_pred hhccc---cCCCCchHHHH---HHHhhcCCCC-ccccccCch-HHHHHHHcCCCCCCCCCChHHHHc
Q 004987 302 FELFC---PFSTGEEKTRT---MSSLRHRVLP-PQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~---~~~i~~~~~p-~~~~~~~p~-~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||......... ...+.....+ ..+....|. ..+||.+||+.||.+| |+.|+++
T Consensus 193 ~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~ 258 (286)
T 3uqc_A 193 YALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLN 258 (286)
T ss_dssp HHHHHSEECSCCCSBCCCSEECCBCTTSCBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHH
T ss_pred HHHHHCCCCCCcCCcchhhHHHHHHhccCCCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHH
Confidence 99999 77654332100 0111111111 122233444 4599999999999999 9999986
No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.92 E-value=1.4e-26 Score=266.13 Aligned_cols=189 Identities=16% Similarity=0.096 Sum_probs=125.2
Q ss_pred eehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004987 65 HSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~gI 142 (720)
.+|+.+|.++ .|+||+++++ +++++. .+|||||| .|++|.++|...+ ++++. .|+.||+.||+|||++||
T Consensus 289 ~~E~~~l~~~~~~~~i~~~~~-~~ed~~---~~yLVMEyv~G~~L~d~i~~~~-~l~~~---~I~~QIl~AL~ylH~~GI 360 (569)
T 4azs_A 289 HNEIKFLTQPPAGFDAPAVLA-HGENAQ---SGWLVMEKLPGRLLSDMLAAGE-EIDRE---KILGSLLRSLAALEKQGF 360 (569)
T ss_dssp HHHHHHHHSCCTTCCCCCEEE-EEECSS---EEEEEEECCCSEEHHHHHHTTC-CCCHH---HHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhcCCCCCeeEEEE-EEEECC---EEEEEEecCCCCcHHHHHHhCC-CCCHH---HHHHHHHHHHHHHHHCCc
Confidence 3788899998 7999999999 666654 67999999 9999999996654 47664 489999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004987 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
|||||||+||||+.+|++||+|||+++....+..
T Consensus 361 IHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~~---------------------------------------------- 394 (569)
T 4azs_A 361 WHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCS---------------------------------------------- 394 (569)
T ss_dssp EESCCCGGGEEECTTSCEEECCCTTEESCC---C----------------------------------------------
T ss_pred eeccCchHhEEECCCCCEEEeecccCeeCCCCCc----------------------------------------------
Confidence 9999999999999999999988888743321100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004987 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~~sDIwSLGvlL~ 302 (720)
.....+||+.|||||++.+. +..++|+||+|+++|
T Consensus 395 --------------------------------------------~~~t~vGTp~YmAPE~l~g~-~~~~~d~~s~g~~~~ 429 (569)
T 4azs_A 395 --------------------------------------------WPTNLVQSFFVFVNELFAEN-KSWNGFWRSAPVHPF 429 (569)
T ss_dssp --------------------------------------------CSHHHHHHHHHHHHHHC------------------C
T ss_pred --------------------------------------------cccCceechhhccHHHhCCC-CCCcccccccccchh
Confidence 00125799999999999876 678899999999999
Q ss_pred hccccCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004987 303 ELFCPFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 303 eLltpf~~~~~~~~~~~~i~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
+|.+++... ...+. . .++.. .....+...++..+|..||.......++|.
T Consensus 430 ~l~~~~~~~------~~~l~-~-~~~~~----~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 479 (569)
T 4azs_A 430 NLPQPWSNW------LYAVW-Q-EPVER----WNFVLLLALFEKKAKLPSAEQQRGATEQWI 479 (569)
T ss_dssp CCCTTHHHH------HHHHH-T-SCGGG----CSHHHHHHHHHTGGGSCCGGGSSCCHHHHH
T ss_pred hhccccchh------HHHhh-c-CCCCC----CcHHHHHHHHhCCCCCCCCChhhhccchhH
Confidence 998743221 11111 1 11111 123466677778888888776655555543
No 252
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.72 E-value=4.7e-19 Score=202.40 Aligned_cols=93 Identities=13% Similarity=0.097 Sum_probs=77.6
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004987 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~gI 142 (720)
..+|..+|.+++||||+++.. ++.... ..|+|||| .|++|.+++.. ++.++.||+.||.|||++||
T Consensus 386 ~~~E~~il~~l~h~nIv~~~~-~~~~~~---~~~lVmE~~~ggsL~~~l~~---------~~~i~~qi~~aL~~LH~~gI 452 (540)
T 3en9_A 386 TAREARYLALVKDFGIPAPYI-FDVDLD---NKRIMMSYINGKLAKDVIED---------NLDIAYKIGEIVGKLHKNDV 452 (540)
T ss_dssp HHHHHHHHHHGGGGTCCCCCE-EEEETT---TTEEEEECCCSEEHHHHSTT---------CTHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHhcCCCCcCceEE-EEEeCC---ccEEEEECCCCCCHHHHHHH---------HHHHHHHHHHHHHHHHHCcC
Confidence 358888999999999994433 122222 34999999 78999999954 56899999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCC
Q 004987 143 VVHNVRPSCFVMSSFNHVSFIESASCSDS 171 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~ 171 (720)
+||||||+|||++. .+||+|||+++..
T Consensus 453 iHrDiKp~NILl~~--~~kL~DFGla~~~ 479 (540)
T 3en9_A 453 IHNDLTTSNFIFDK--DLYIIDFGLGKIS 479 (540)
T ss_dssp ECTTCCTTSEEESS--SEEECCCTTCEEC
T ss_pred ccCCCCHHHEEECC--eEEEEECccCEEC
Confidence 99999999999988 9999999888543
No 253
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.56 E-value=1.6e-14 Score=155.43 Aligned_cols=125 Identities=10% Similarity=0.035 Sum_probs=97.4
Q ss_pred hhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCe
Q 004987 581 EGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKL 659 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i 659 (720)
++..++|...+-+.+..++. .+.+|.+.|.+|+|+|||++|||||.|++|+|||+.+. .++..+. |.+.|
T Consensus 102 dg~v~lWd~~~~~~~~~~~~-~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~--------~~~~~~~~h~~~V 172 (344)
T 4gqb_B 102 SGAVELWELDENETLIVSKF-CKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQ--------VVLSSYRAHAAQV 172 (344)
T ss_dssp TSEEEEEEECTTSSCEEEEE-EEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT--------EEEEEECCCSSCE
T ss_pred CCEEEEEeccCCCceeEeec-cccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCC--------cEEEEEcCcCCce
Confidence 44455555444333333321 23478999999999999999999999999999999876 2455554 57789
Q ss_pred EEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE---------EEEEeecCC-ceEEEecCccc
Q 004987 660 SSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA---------LYCIVLNKL-LIIFRYGMFQE 714 (720)
Q Consensus 660 ~~l~~~~~~~~~laS~s~D~~v~lWD~~tg~~~~~---------~~~v~~~~~-~~~~~~~~~~~ 714 (720)
.+++|+|++..+||||+.|++|+|||+++++++.+ +.+++|++. ...+..|+.|.
T Consensus 173 ~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg 237 (344)
T 4gqb_B 173 TCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENG 237 (344)
T ss_dssp EEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTS
T ss_pred EEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCC
Confidence 99999998878999999999999999999998875 789999985 45667777664
No 254
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.55 E-value=3.2e-14 Score=151.17 Aligned_cols=121 Identities=14% Similarity=0.139 Sum_probs=100.9
Q ss_pred hhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCe
Q 004987 581 EGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKL 659 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i 659 (720)
++..+++...+.+.+.+++ +|...|.+++|+|||++|||||.|++|+|||+++. ..+..+. |...|
T Consensus 185 dg~i~iwd~~~~~~~~~~~-----~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~--------~~~~~~~~h~~~v 251 (321)
T 3ow8_A 185 DGIINIFDIATGKLLHTLE-----GHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHA--------NLAGTLSGHASWV 251 (321)
T ss_dssp TSCEEEEETTTTEEEEEEC-----CCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTC--------CEEEEECCCSSCE
T ss_pred CCeEEEEECCCCcEEEEEc-----ccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCc--------ceeEEEcCCCCce
Confidence 3455666666667777664 45889999999999999999999999999998765 2333443 46789
Q ss_pred EEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccce
Q 004987 660 SSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 660 ~~l~~~~~~~~~laS~s~D~~v~lWD~~tg~~~~~-------~~~v~~~~~~~~~~~~~~~~~ 715 (720)
.+++|+|+ +.+||||+.|++|+|||+.+++++.+ |++++|++....+.+++.|..
T Consensus 252 ~~~~~sp~-~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~ 313 (321)
T 3ow8_A 252 LNVAFCPD-DTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQE 313 (321)
T ss_dssp EEEEECTT-SSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCC
T ss_pred EEEEECCC-CCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEeCCCe
Confidence 99999995 56999999999999999999999987 899999999999999888753
No 255
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.54 E-value=5.1e-14 Score=147.98 Aligned_cols=103 Identities=10% Similarity=0.022 Sum_probs=89.8
Q ss_pred CCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCeEEEEEecCCCCEEEEEeCCCcEE
Q 004987 604 LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEGVVQ 682 (720)
Q Consensus 604 ~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~l~~~~~~~~~laS~s~D~~v~ 682 (720)
.+|.+.|.+|+|+|||++||||+.|++|+|||+.+.. ++..+. +...|.+++|+|+ +++||||+.|++|+
T Consensus 10 ~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~--------~~~~~~~~~~~v~~~~~~~~-~~~l~s~s~d~~i~ 80 (304)
T 2ynn_A 10 SNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQV--------EVRSIQVTETPVRAGKFIAR-KNWIIVGSDDFRIR 80 (304)
T ss_dssp EEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTE--------EEEEEECCSSCEEEEEEEGG-GTEEEEEETTSEEE
T ss_pred cCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCc--------eeEEeeccCCcEEEEEEeCC-CCEEEEECCCCEEE
Confidence 4568999999999999999999999999999987762 334443 4677999999994 67999999999999
Q ss_pred EEECCCCcEEEE-------EEEEeecCCceEEEecCccce
Q 004987 683 VGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 683 lWD~~tg~~~~~-------~~~v~~~~~~~~~~~~~~~~~ 715 (720)
|||+.+|+++.+ |++++|++....+.+|+.|..
T Consensus 81 vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~ 120 (304)
T 2ynn_A 81 VFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLT 120 (304)
T ss_dssp EEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSC
T ss_pred EEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCe
Confidence 999999999876 899999999999999988754
No 256
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.51 E-value=2.3e-15 Score=157.59 Aligned_cols=88 Identities=15% Similarity=0.037 Sum_probs=72.1
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004987 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~gI 142 (720)
..+|..+|.+++ | +++++ ++..+ ..|+|||| .|++|.+ +.. .+...++.||+.||.|||++||
T Consensus 151 ~~~E~~~l~~l~--~-~~v~~-~~~~~----~~~lvmE~~~g~~L~~-l~~-------~~~~~i~~qi~~~l~~lH~~gi 214 (282)
T 1zar_A 151 ARNEFRALQKLQ--G-LAVPK-VYAWE----GNAVLMELIDAKELYR-VRV-------ENPDEVLDMILEEVAKFYHRGI 214 (282)
T ss_dssp HHHHHHHHHHTT--T-SSSCC-EEEEE----TTEEEEECCCCEEGGG-CCC-------SCHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHhcc--C-CCcCe-EEecc----ceEEEEEecCCCcHHH-cch-------hhHHHHHHHHHHHHHHHHHCCC
Confidence 347888999998 5 66666 44332 35999999 8899988 521 2345799999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcc
Q 004987 143 VVHNVRPSCFVMSSFNHVSFIESASC 168 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a 168 (720)
+||||||+|||++ ++.++|+|||++
T Consensus 215 iHrDlkp~NILl~-~~~vkl~DFG~a 239 (282)
T 1zar_A 215 VHGDLSQYNVLVS-EEGIWIIDFPQS 239 (282)
T ss_dssp ECSCCSTTSEEEE-TTEEEECCCTTC
T ss_pred EeCCCCHHHEEEE-CCcEEEEECCCC
Confidence 9999999999999 999999888876
No 257
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.51 E-value=1.1e-13 Score=144.78 Aligned_cols=106 Identities=12% Similarity=0.160 Sum_probs=84.6
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCeEEEEEecC-CCCEEEEEeCCCc
Q 004987 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSY-IKSQIASSNFEGV 680 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~~~~~-~~~~laS~s~D~~ 680 (720)
+.+|.+.|.+++|+|||++|||||.|++|+|||+..... .++..+ .|.+.|.+|+|+|. .+++||||+.|++
T Consensus 5 ~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~------~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~ 78 (297)
T 2pm7_B 5 ANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETH------KLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGK 78 (297)
T ss_dssp CCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCB------CCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTE
T ss_pred ccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCc------EEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCE
Confidence 457899999999999999999999999999999864311 233444 45778999999864 4679999999999
Q ss_pred EEEEECCCCc--EEEE-------EEEEeecCC--ceEEEecCccc
Q 004987 681 VQVGQVLHLI--YFSA-------LYCIVLNKL--LIIFRYGMFQE 714 (720)
Q Consensus 681 v~lWD~~tg~--~~~~-------~~~v~~~~~--~~~~~~~~~~~ 714 (720)
|+|||+.+++ .+.+ |+|++|++. ...+.+++.|.
T Consensus 79 v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~ 123 (297)
T 2pm7_B 79 VMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDG 123 (297)
T ss_dssp EEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTS
T ss_pred EEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCC
Confidence 9999999884 3332 899999986 56677776664
No 258
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.51 E-value=8.3e-14 Score=149.78 Aligned_cols=125 Identities=10% Similarity=0.083 Sum_probs=99.7
Q ss_pred chhhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCC-EEEEeeCCCcEEEeeCCcccccccccccceEEe---
Q 004987 578 PFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGE-LFAAAGVNKKIKVFECDAIINENRDIHYPVVEM--- 653 (720)
Q Consensus 578 ~f~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~-~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~--- 653 (720)
.-.++..++|...+.+++.+++ +|.+.|.+++|+|++. +|||||.|++|+|||+++.. ++..+
T Consensus 145 gs~d~~i~iwd~~~~~~~~~~~-----~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~--------~~~~~~~~ 211 (344)
T 4gqb_B 145 GSKDICIKVWDLAQQVVLSSYR-----AHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPK--------PASQIGCS 211 (344)
T ss_dssp EETTSCEEEEETTTTEEEEEEC-----CCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSS--------CEEECC--
T ss_pred EeCCCeEEEEECCCCcEEEEEc-----CcCCceEEEEecCCCCCceeeeccccccccccccccc--------eeeeeecc
Confidence 3445567777777777777764 4689999999999995 79999999999999998762 33332
Q ss_pred cCCCCeEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCc-eEEEecCccce
Q 004987 654 ASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLL-IIFRYGMFQEV 715 (720)
Q Consensus 654 ~~~~~i~~l~~~~~~~~~laS~s~D~~v~lWD~~tg~~~~~-------~~~v~~~~~~-~~~~~~~~~~~ 715 (720)
.+...+.+++|+|+++.+||+|+.||+|+|||+++++++.+ |++++|++.. ..+.+|+.|..
T Consensus 212 ~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~ 281 (344)
T 4gqb_B 212 APGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCS 281 (344)
T ss_dssp --CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSC
T ss_pred eeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCe
Confidence 22456999999998888999999999999999999999886 8999999986 56788887754
No 259
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.50 E-value=1.3e-13 Score=147.35 Aligned_cols=112 Identities=10% Similarity=0.095 Sum_probs=90.7
Q ss_pred CCCCCCCCeEEEEE-----CC-CCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCeEEEEEecCCCCEEEE
Q 004987 602 DLLNSSNLVCSLSF-----DR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIAS 674 (720)
Q Consensus 602 ~~~~~~~~V~sv~f-----~~-dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~~~~~~~~~laS 674 (720)
.|.+|.+.|.+|+| ++ ||++|||||.|++|+|||+....... ....+...+ .|...|.+|+|+|+ +.+|||
T Consensus 16 ~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~-~~~~~~~~l~~h~~~V~~~~~~~~-~~~l~s 93 (343)
T 2xzm_R 16 ILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNG-YFGIPHKALTGHNHFVSDLALSQE-NCFAIS 93 (343)
T ss_dssp EEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSS-BSEEEEEEECCCSSCEEEEEECSS-TTEEEE
T ss_pred eeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCccc-ccccccchhccCCCceEEEEECCC-CCEEEE
Confidence 45677999999999 76 99999999999999999986542111 011244444 34678999999994 579999
Q ss_pred EeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccce
Q 004987 675 SNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 675 ~s~D~~v~lWD~~tg~~~~~-------~~~v~~~~~~~~~~~~~~~~~ 715 (720)
|+.|++|+|||+++++++.+ |++++|++....+.+++.|..
T Consensus 94 ~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~ 141 (343)
T 2xzm_R 94 SSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAERE 141 (343)
T ss_dssp EETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSC
T ss_pred EcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCE
Confidence 99999999999999998876 899999999998888887753
No 260
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.50 E-value=1.1e-13 Score=146.69 Aligned_cols=110 Identities=12% Similarity=0.117 Sum_probs=91.2
Q ss_pred CCCCCCCCeEEEEECCCC-CEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCeEEEEEecCCCCEEEEEeCCC
Q 004987 602 DLLNSSNLVCSLSFDRDG-ELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEG 679 (720)
Q Consensus 602 ~~~~~~~~V~sv~f~~dg-~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~l~~~~~~~~~laS~s~D~ 679 (720)
.|.+|.+.|.+|+|+|++ .+|||||.|++|+|||+..... ....|+..+. |...|.+++|+|+ +.+||||+.|+
T Consensus 12 ~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~---~~~~~~~~~~~h~~~v~~~~~s~d-g~~l~s~s~D~ 87 (319)
T 3frx_A 12 TLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQ---KFGVPVRSFKGHSHIVQDCTLTAD-GAYALSASWDK 87 (319)
T ss_dssp EECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETT---EEEEEEEEEECCSSCEEEEEECTT-SSEEEEEETTS
T ss_pred EEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCc---cccccceEEeCCcccEEEEEECCC-CCEEEEEeCCC
Confidence 356779999999999976 8999999999999999754311 1113455554 4678999999995 57999999999
Q ss_pred cEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccce
Q 004987 680 VVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 680 ~v~lWD~~tg~~~~~-------~~~v~~~~~~~~~~~~~~~~~ 715 (720)
+|+|||+.+|+++.+ |++++|++....+.+|+.|..
T Consensus 88 ~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~ 130 (319)
T 3frx_A 88 TLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKT 130 (319)
T ss_dssp EEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSC
T ss_pred EEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCe
Confidence 999999999998876 899999999999999998853
No 261
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.50 E-value=6.2e-14 Score=154.07 Aligned_cols=121 Identities=15% Similarity=0.179 Sum_probs=99.5
Q ss_pred hhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCC
Q 004987 580 LEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSK 658 (720)
Q Consensus 580 ~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~ 658 (720)
.++..+.|.+.+.+.+.++ .+|.+.|.+|+|+|+|++|||||.|++|+|||+.+. .++..+ .|...
T Consensus 128 ~Dg~i~vwd~~~~~~~~~l-----~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~--------~~~~~~~~h~~~ 194 (410)
T 1vyh_C 128 EDATIKVWDYETGDFERTL-----KGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF--------ECIRTMHGHDHN 194 (410)
T ss_dssp SSSCEEEEETTTCCCCEEE-----CCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSS--------CEEECCCCCSSC
T ss_pred CCCeEEEEECCCCcEEEEE-----eccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC--------ceeEEEcCCCCC
Confidence 3455666666666555555 456899999999999999999999999999998765 233333 34678
Q ss_pred eEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccc
Q 004987 659 LSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 659 i~~l~~~~~~~~~laS~s~D~~v~lWD~~tg~~~~~-------~~~v~~~~~~~~~~~~~~~~ 714 (720)
|++|+|+|+ +++|+||+.|++|++||+++|+++.+ |.++.|++....+.+|+.|.
T Consensus 195 V~~v~~~p~-~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~ 256 (410)
T 1vyh_C 195 VSSVSIMPN-GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQ 256 (410)
T ss_dssp EEEEEECSS-SSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTS
T ss_pred EEEEEEeCC-CCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCC
Confidence 999999995 57999999999999999999999886 78999999999998888774
No 262
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.49 E-value=8.8e-14 Score=146.16 Aligned_cols=123 Identities=15% Similarity=0.161 Sum_probs=100.1
Q ss_pred hhhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCC
Q 004987 579 FLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRS 657 (720)
Q Consensus 579 f~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~ 657 (720)
-.++..++|.+.+.+.+..+. +|...|.+++|+|+|++|||||.|++|+|||+.+. .++..+ .|..
T Consensus 32 ~~dg~v~lWd~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~--------~~~~~~~~h~~ 98 (304)
T 2ynn_A 32 LYSGRVELWNYETQVEVRSIQ-----VTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTG--------EKVVDFEAHPD 98 (304)
T ss_dssp ETTSEEEEEETTTTEEEEEEE-----CCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTC--------CEEEEEECCSS
T ss_pred cCCCcEEEEECCCCceeEEee-----ccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCC--------cEEEEEeCCCC
Confidence 345677888888877777775 34789999999999999999999999999998876 234344 4577
Q ss_pred CeEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEE-E-------EEEEeecC-CceEEEecCccce
Q 004987 658 KLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFS-A-------LYCIVLNK-LLIIFRYGMFQEV 715 (720)
Q Consensus 658 ~i~~l~~~~~~~~~laS~s~D~~v~lWD~~tg~~~~-~-------~~~v~~~~-~~~~~~~~~~~~~ 715 (720)
.|.+|+|+|+ +.+||||+.||+|+|||++++..+. . |+|++|+| ....+.+|+.|..
T Consensus 99 ~v~~~~~~~~-~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~ 164 (304)
T 2ynn_A 99 YIRSIAVHPT-KPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRT 164 (304)
T ss_dssp CEEEEEECSS-SSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSE
T ss_pred cEEEEEEcCC-CCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCe
Confidence 8999999995 5799999999999999999985543 2 89999998 5677888887753
No 263
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.49 E-value=1.3e-13 Score=151.56 Aligned_cols=105 Identities=10% Similarity=0.036 Sum_probs=91.2
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCeEEEEEecCCCCEEEEEeCCCcE
Q 004987 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~l~~~~~~~~~laS~s~D~~v 681 (720)
+.+|.+.|++++|+|++.+|||||.|++|+|||+.++. .+..+. |...|.+|+|+|+ +.+||||+.|++|
T Consensus 104 l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~--------~~~~l~~h~~~V~~v~~~~~-~~~l~sgs~D~~i 174 (410)
T 1vyh_C 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGD--------FERTLKGHTDSVQDISFDHS-GKLLASCSADMTI 174 (410)
T ss_dssp EECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCC--------CCEEECCCSSCEEEEEECTT-SSEEEEEETTSCC
T ss_pred ecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc--------EEEEEeccCCcEEEEEEcCC-CCEEEEEeCCCeE
Confidence 45779999999999999999999999999999988762 233443 4678999999995 5799999999999
Q ss_pred EEEECCCCcEEEE-------EEEEeecCCceEEEecCccceE
Q 004987 682 QVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 682 ~lWD~~tg~~~~~-------~~~v~~~~~~~~~~~~~~~~~~ 716 (720)
+|||+.+++++.+ |+|++|++....+.+|+.|..-
T Consensus 175 ~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i 216 (410)
T 1vyh_C 175 KLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTI 216 (410)
T ss_dssp CEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEE
T ss_pred EEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeE
Confidence 9999999999876 8999999999999999888643
No 264
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.48 E-value=6.7e-14 Score=148.04 Aligned_cols=107 Identities=10% Similarity=0.165 Sum_probs=82.7
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCeEEEEEecC-CCCEEEEEeCCCc
Q 004987 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSY-IKSQIASSNFEGV 680 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~~~~~-~~~~laS~s~D~~ 680 (720)
+.+|.+.|.+|+|+|||++|||||.|++|||||+.+... .++..+ .|.+.|.+|+|+|. ++++||||+.|++
T Consensus 9 ~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~------~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~ 82 (316)
T 3bg1_A 9 DTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQ------ILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRK 82 (316)
T ss_dssp -----CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEE------EEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSC
T ss_pred cccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCc------EEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCE
Confidence 457899999999999999999999999999999865410 123334 45778999999863 4679999999999
Q ss_pred EEEEECCCCc--EEEE-------EEEEeecCC--ceEEEecCccce
Q 004987 681 VQVGQVLHLI--YFSA-------LYCIVLNKL--LIIFRYGMFQEV 715 (720)
Q Consensus 681 v~lWD~~tg~--~~~~-------~~~v~~~~~--~~~~~~~~~~~~ 715 (720)
|+|||+++++ ++.+ |++++|+|. ...+.+|+.|..
T Consensus 83 v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~ 128 (316)
T 3bg1_A 83 VIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGA 128 (316)
T ss_dssp EEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSC
T ss_pred EEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCC
Confidence 9999999984 4433 789999997 667778777754
No 265
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.48 E-value=4.2e-13 Score=143.30 Aligned_cols=120 Identities=13% Similarity=0.159 Sum_probs=98.4
Q ss_pred hhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCe
Q 004987 581 EGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKL 659 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i 659 (720)
++..++|...+.+.+.++ .+|.+.|.+++|+|+|.+|||||.|++|+|||+++. .++..+. |...|
T Consensus 163 d~~i~~wd~~~~~~~~~~-----~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~--------~~~~~~~~h~~~v 229 (340)
T 1got_B 163 DTTCALWDIETGQQTTTF-----TGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREG--------MCRQTFTGHESDI 229 (340)
T ss_dssp TSCEEEEETTTTEEEEEE-----CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC--------SEEEEECCCSSCE
T ss_pred CCcEEEEECCCCcEEEEE-----cCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCC--------eeEEEEcCCcCCE
Confidence 445566666666666555 456899999999999999999999999999998775 2344443 46789
Q ss_pred EEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE---------EEEEeecCCceEEEecCccc
Q 004987 660 SSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA---------LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 660 ~~l~~~~~~~~~laS~s~D~~v~lWD~~tg~~~~~---------~~~v~~~~~~~~~~~~~~~~ 714 (720)
.+|+|+|+ +++||||+.||+|+|||+++++.+.+ |++++|++....+..|+-|.
T Consensus 230 ~~v~~~p~-~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~ 292 (340)
T 1got_B 230 NAICFFPN-GNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDF 292 (340)
T ss_dssp EEEEECTT-SSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTS
T ss_pred EEEEEcCC-CCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCC
Confidence 99999995 57999999999999999999988765 78999999998888887764
No 266
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.47 E-value=2.6e-13 Score=146.29 Aligned_cols=123 Identities=11% Similarity=0.084 Sum_probs=97.4
Q ss_pred hhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCC-CEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCe
Q 004987 582 GLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDG-ELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKL 659 (720)
Q Consensus 582 ~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg-~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i 659 (720)
+..++|...+.+.+..+. +..|...|.+|+|+|++ .+||+|+.|++|+|||+++. .++..+. +...|
T Consensus 204 g~v~~wd~~~~~~~~~~~---~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~--------~~~~~~~~~~~~v 272 (357)
T 4g56_B 204 GRILLWDTRKPKPATRID---FCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNP--------DSAQTSAVHSQNI 272 (357)
T ss_dssp SCEEECCTTSSSCBCBCC---CTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCG--------GGCEEECCCSSCE
T ss_pred CceEEEECCCCceeeeee---eccccccccchhhhhcccceEEEeecccceeEEECCCC--------cEeEEEeccceeE
Confidence 344555554444444332 34567889999999985 68999999999999998876 2344443 46789
Q ss_pred EEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE------EEEEeecC-CceEEEecCccce
Q 004987 660 SSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA------LYCIVLNK-LLIIFRYGMFQEV 715 (720)
Q Consensus 660 ~~l~~~~~~~~~laS~s~D~~v~lWD~~tg~~~~~------~~~v~~~~-~~~~~~~~~~~~~ 715 (720)
++|+|+|+++.+||||+.|++|+|||+.++++++. |++|+|+| ....+.+++.|..
T Consensus 273 ~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~~H~~~V~~vafsP~d~~~l~s~s~Dg~ 335 (357)
T 4g56_B 273 TGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDLSHRDFVTGVAWSPLDHSKFTTVGWDHK 335 (357)
T ss_dssp EEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEECCCSSCEEEEEECSSSTTEEEEEETTSC
T ss_pred EEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEECCCCCCEEEEEEeCCCCCEEEEEcCCCe
Confidence 99999998778999999999999999999999886 99999998 6788888888764
No 267
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.47 E-value=3.4e-13 Score=144.01 Aligned_cols=123 Identities=10% Similarity=0.119 Sum_probs=97.6
Q ss_pred hhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecC---CC
Q 004987 581 EGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS---RS 657 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~---~~ 657 (720)
++..++|...+.+.+.++ .+|...|++|+|+|+|.+|||||.|++|+|||+++.. ++..+.+ ..
T Consensus 205 d~~v~~wd~~~~~~~~~~-----~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~--------~~~~~~~~~~~~ 271 (340)
T 1got_B 205 DASAKLWDVREGMCRQTF-----TGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQ--------ELMTYSHDNIIC 271 (340)
T ss_dssp TSCEEEEETTTCSEEEEE-----CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE--------EEEEECCTTCCS
T ss_pred CCcEEEEECCCCeeEEEE-----cCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCc--------EEEEEccCCccc
Confidence 344455554444444444 4578999999999999999999999999999987652 2333333 23
Q ss_pred CeEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceEE
Q 004987 658 KLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 658 ~i~~l~~~~~~~~~laS~s~D~~v~lWD~~tg~~~~~-------~~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
.|.+++|+|+ +.+||+|+.||+|+|||+.+++.+.+ |+|++|++....+.+|+.|..-+
T Consensus 272 ~v~~~~~s~~-g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~ 337 (340)
T 1got_B 272 GITSVSFSKS-GRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLK 337 (340)
T ss_dssp CEEEEEECTT-SSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEE
T ss_pred ceEEEEECCC-CCEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEE
Confidence 6999999995 57999999999999999999998876 89999999999999999886433
No 268
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.47 E-value=3e-13 Score=154.08 Aligned_cols=104 Identities=14% Similarity=0.147 Sum_probs=88.3
Q ss_pred CCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCeEEEEEecCCCCEEEEEeCCCc
Q 004987 602 DLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGV 680 (720)
Q Consensus 602 ~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~~~~~~~~~laS~s~D~~ 680 (720)
.|.||.+.|++|+|+|||++|||||.|++|+|||... .++..+ .|.+.|.+|+|+|+ +.+|||++.|++
T Consensus 11 ~L~GH~~~V~~~a~spdg~~las~~~d~~v~iWd~~~---------~~~~~l~gh~~~V~~l~fspd-g~~las~~~d~~ 80 (577)
T 2ymu_A 11 RLEAHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNG---------QLLQTLTGHSSSVWGVAFSPD-GQTIASASDDKT 80 (577)
T ss_dssp EECCCSSCEEEEEECTTSSCEEEEETTSEEEEECTTS---------CEEEEEECCSSCEEEEEECTT-SSEEEEEETTSC
T ss_pred EECCCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCC---------CEEEEEeCCCCCEEEEEECCC-CCEEEEEeCCCE
Confidence 4789999999999999999999999999999999532 134444 35778999999995 579999999999
Q ss_pred EEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceE
Q 004987 681 VQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 681 v~lWD~~tg~~~~~-------~~~v~~~~~~~~~~~~~~~~~~ 716 (720)
|+|||+ +|+++.+ |++++|++....+.+++.|...
T Consensus 81 i~vWd~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~~ 122 (577)
T 2ymu_A 81 VKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTV 122 (577)
T ss_dssp EEEEET-TSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred EEEEEC-CCCEEEEEECCCCCEEEEEECCCCCEEEEEcCCCce
Confidence 999996 6777776 8999999999988888776543
No 269
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.46 E-value=8.2e-14 Score=152.22 Aligned_cols=86 Identities=10% Similarity=0.060 Sum_probs=72.5
Q ss_pred CCCCCCCCCeEEEEECC--------CCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCeEEEEEecCCCCEE
Q 004987 601 GDLLNSSNLVCSLSFDR--------DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQI 672 (720)
Q Consensus 601 ~~~~~~~~~V~sv~f~~--------dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~l 672 (720)
+.+.||.+.|++|+|+| ||++|||||.|++|||||+.+.. .......+++.|.+|+|+|+++++|
T Consensus 130 ~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~-------~~~~~~~~~~~v~~v~~~p~~~~~l 202 (393)
T 4gq1_A 130 GGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEG-------PILAGYPLSSPGISVQFRPSNPNQL 202 (393)
T ss_dssp CTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTE-------EEEEEEECSSCEEEEEEETTEEEEE
T ss_pred cccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCc-------eeeeecCCCCCcEEEEECCCCCceE
Confidence 56789999999999998 99999999999999999986541 2234456788999999999877799
Q ss_pred EEEeCCCcEEEEECCCCcEEE
Q 004987 673 ASSNFEGVVQVGQVLHLIYFS 693 (720)
Q Consensus 673 aS~s~D~~v~lWD~~tg~~~~ 693 (720)
|||+.||+|+|||+++++...
T Consensus 203 ~~~~~d~~v~~wd~~t~~~~~ 223 (393)
T 4gq1_A 203 IVGERNGNIRIFDWTLNLSAE 223 (393)
T ss_dssp EEEETTSEEEEEETTCCC---
T ss_pred EecCCCCEEEEEECCCCcccc
Confidence 999999999999999998654
No 270
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.45 E-value=4.4e-13 Score=142.65 Aligned_cols=107 Identities=14% Similarity=0.221 Sum_probs=81.9
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCeEEEEEecCCCCEEEEEeCCCcE
Q 004987 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~~~~~~~~~laS~s~D~~v 681 (720)
+.+|.+.|.+|+|+|||++|||||.|++|+|||+..... ...++..+ .|...|.+|+|+|+ +.+||||+.|++|
T Consensus 103 ~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~----~~~~~~~~~~h~~~v~~v~~~p~-~~~l~s~s~D~~i 177 (330)
T 2hes_X 103 IEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGE----EYECISVLQEHSQDVKHVIWHPS-EALLASSSYDDTV 177 (330)
T ss_dssp EC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCC----CCEEEEEECCCSSCEEEEEECSS-SSEEEEEETTSCE
T ss_pred EcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCC----CeEEEEEeccCCCceEEEEECCC-CCEEEEEcCCCeE
Confidence 356789999999999999999999999999999853211 01233344 34678999999995 5799999999999
Q ss_pred EEEECCCC--cEEEE-------EEEEeecCC--ceEEEecCccc
Q 004987 682 QVGQVLHL--IYFSA-------LYCIVLNKL--LIIFRYGMFQE 714 (720)
Q Consensus 682 ~lWD~~tg--~~~~~-------~~~v~~~~~--~~~~~~~~~~~ 714 (720)
+|||+.++ +++.+ |++++|++. ...+.+|+.|.
T Consensus 178 ~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~ 221 (330)
T 2hes_X 178 RIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDS 221 (330)
T ss_dssp EEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTS
T ss_pred EEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCC
Confidence 99999887 56654 899999998 55677777664
No 271
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.45 E-value=8.4e-13 Score=138.38 Aligned_cols=104 Identities=19% Similarity=0.309 Sum_probs=88.9
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCeEEEEEecCCCCEEEEEeCCCcE
Q 004987 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~~~~~~~~~laS~s~D~~v 681 (720)
+.+|...|.+++|+|||++||||+.|++|+|||+.+.. ....+ .|...|.+++|+|+ +++||+|+.|++|
T Consensus 19 ~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~--------~~~~~~~h~~~v~~~~~~~~-~~~l~s~~~d~~i 89 (312)
T 4ery_A 19 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK--------FEKTISGHKLGISDVAWSSD-SNLLVSASDDKTL 89 (312)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC--------EEEEECCCSSCEEEEEECTT-SSEEEEEETTSEE
T ss_pred EcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcc--------cchhhccCCCceEEEEEcCC-CCEEEEECCCCEE
Confidence 34679999999999999999999999999999986651 22333 34678999999995 5799999999999
Q ss_pred EEEECCCCcEEEE-------EEEEeecCCceEEEecCccce
Q 004987 682 QVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 682 ~lWD~~tg~~~~~-------~~~v~~~~~~~~~~~~~~~~~ 715 (720)
+|||+.+++++.+ |+|++|++....+.+|+.|..
T Consensus 90 ~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~ 130 (312)
T 4ery_A 90 KIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 130 (312)
T ss_dssp EEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSC
T ss_pred EEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCc
Confidence 9999999998876 789999999999988887753
No 272
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.45 E-value=5.7e-13 Score=141.46 Aligned_cols=102 Identities=11% Similarity=0.205 Sum_probs=89.0
Q ss_pred CCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCeEEEEEecCCCCEEEEEeCCCcEEE
Q 004987 605 NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEGVVQV 683 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~l~~~~~~~~~laS~s~D~~v~l 683 (720)
.|...|.+++|+|||++||+|+.|++|+|||+++. .++..+. +...|.+|+|+|+ +.+||||+.|++|+|
T Consensus 162 ~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~--------~~~~~~~~h~~~v~~l~~spd-~~~l~s~s~dg~i~i 232 (321)
T 3ow8_A 162 TRGKFILSIAYSPDGKYLASGAIDGIINIFDIATG--------KLLHTLEGHAMPIRSLTFSPD-SQLLVTASDDGYIKI 232 (321)
T ss_dssp CSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT--------EEEEEECCCSSCCCEEEECTT-SCEEEEECTTSCEEE
T ss_pred CCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCC--------cEEEEEcccCCceeEEEEcCC-CCEEEEEcCCCeEEE
Confidence 45788999999999999999999999999998776 2444454 4667999999995 569999999999999
Q ss_pred EECCCCcEEEE-------EEEEeecCCceEEEecCccce
Q 004987 684 GQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 684 WD~~tg~~~~~-------~~~v~~~~~~~~~~~~~~~~~ 715 (720)
||+++++++.+ |++++|++....+.+++.|..
T Consensus 233 wd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~ 271 (321)
T 3ow8_A 233 YDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKS 271 (321)
T ss_dssp EETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred EECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCc
Confidence 99999998876 899999999999999988764
No 273
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.45 E-value=5.2e-13 Score=142.96 Aligned_cols=113 Identities=11% Similarity=0.159 Sum_probs=88.6
Q ss_pred eEEeeeeccCCCCCCCC-CeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEE-ecCCCCeEEEEEecCCC
Q 004987 592 LRVKADLNQGDLLNSSN-LVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVE-MASRSKLSSICWNSYIK 669 (720)
Q Consensus 592 ~~~~~~l~~~~~~~~~~-~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~i~~l~~~~~~~ 669 (720)
++.+.+|+ +|.. .|.+|+|+|||++|||||.|++|+|||+...... +.... ..|...|.+|+|+|+ +
T Consensus 5 ~~~~~~~~-----~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~-----~~~~~~~~h~~~v~~~~~sp~-g 73 (345)
T 3fm0_A 5 LVLLGRVP-----AHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWI-----CKSVLSEGHQRTVRKVAWSPC-G 73 (345)
T ss_dssp EEEEEEEC-----CSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEE-----EEEEECSSCSSCEEEEEECTT-S
T ss_pred EEEeeeec-----CCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcce-----eeeeeccccCCcEEEEEECCC-C
Confidence 45556664 3455 8999999999999999999999999997654100 11111 235678999999995 6
Q ss_pred CEEEEEeCCCcEEEEECCCCc--EEEE-------EEEEeecCCceEEEecCccce
Q 004987 670 SQIASSNFEGVVQVGQVLHLI--YFSA-------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 670 ~~laS~s~D~~v~lWD~~tg~--~~~~-------~~~v~~~~~~~~~~~~~~~~~ 715 (720)
++||||+.|++|+|||+.++. ++.+ |++++|++....+.+|+.|..
T Consensus 74 ~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~ 128 (345)
T 3fm0_A 74 NYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKS 128 (345)
T ss_dssp SEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred CEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCe
Confidence 799999999999999998874 4444 899999999999999988754
No 274
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.45 E-value=6.1e-13 Score=154.01 Aligned_cols=129 Identities=13% Similarity=0.154 Sum_probs=95.6
Q ss_pred hhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCeE
Q 004987 581 EGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLS 660 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~ 660 (720)
++..++|.....+.+.++ .+|.+.|.+|+|+|||++|||||.|++|+|||+.++.....-....+....|.+.|.
T Consensus 169 D~~v~lwd~~~~~~~~~l-----~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~ 243 (611)
T 1nr0_A 169 DNTVAIFEGPPFKFKSTF-----GEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVF 243 (611)
T ss_dssp TSCEEEEETTTBEEEEEE-----CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEE
T ss_pred CCeEEEEECCCCeEeeee-----ccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEE
Confidence 344566665556666555 456899999999999999999999999999998765210000000001114677899
Q ss_pred EEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE----------------------------------------------
Q 004987 661 SICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA---------------------------------------------- 694 (720)
Q Consensus 661 ~l~~~~~~~~~laS~s~D~~v~lWD~~tg~~~~~---------------------------------------------- 694 (720)
+|+|+|+ +.+||||+.|++|+|||+.+++++.+
T Consensus 244 ~v~~spd-g~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~g 322 (611)
T 1nr0_A 244 GLTWSPD-GTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYG 322 (611)
T ss_dssp EEEECTT-SSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECC
T ss_pred EEEECCC-CCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcC
Confidence 9999995 57999999999999999999876532
Q ss_pred ----EEEEeecCCceEEEecCccce
Q 004987 695 ----LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 695 ----~~~v~~~~~~~~~~~~~~~~~ 715 (720)
|++++|++....+.+++.|..
T Consensus 323 h~~~v~~l~~spdg~~l~s~s~D~~ 347 (611)
T 1nr0_A 323 HNKAITALSSSADGKTLFSADAEGH 347 (611)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSC
T ss_pred CCCCEEEEEEeCCCCEEEEEeCCCc
Confidence 678888888888888877653
No 275
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.44 E-value=7.6e-13 Score=140.76 Aligned_cols=109 Identities=7% Similarity=0.170 Sum_probs=81.5
Q ss_pred CCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCeEEEEEecCCCCEEEEEeCCCcEEE
Q 004987 605 NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGVVQV 683 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~~~~~~~~~laS~s~D~~v~l 683 (720)
+|...|.+|+|+|+|++|||||.|++|+|||+.......... .++..+ .|...|.+|+|+|+ +.+||||+.|++|+|
T Consensus 56 ~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~-~~~~~~~~h~~~V~~v~~sp~-g~~las~s~D~~v~i 133 (330)
T 2hes_X 56 AHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEM-DLLAIIEGHENEVKGVAWSND-GYYLATCSRDKSVWI 133 (330)
T ss_dssp CCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCC-EEEEEEC----CEEEEEECTT-SCEEEEEETTSCEEE
T ss_pred CccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccc-eeEEEEcCCCCcEEEEEECCC-CCEEEEEeCCCEEEE
Confidence 378999999999999999999999999999985431110111 133344 35778999999995 579999999999999
Q ss_pred EECCC-C---cEEEE-------EEEEeecCCceEEEecCccce
Q 004987 684 GQVLH-L---IYFSA-------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 684 WD~~t-g---~~~~~-------~~~v~~~~~~~~~~~~~~~~~ 715 (720)
||+++ + +++.. |++++|+|....+.+++.|..
T Consensus 134 wd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~ 176 (330)
T 2hes_X 134 WETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDT 176 (330)
T ss_dssp EECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSC
T ss_pred EeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCe
Confidence 99943 2 45443 899999999999999988853
No 276
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.44 E-value=9.4e-13 Score=143.59 Aligned_cols=122 Identities=10% Similarity=0.158 Sum_probs=102.0
Q ss_pred hhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCeE
Q 004987 581 EGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLS 660 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~ 660 (720)
++..++|...+.+++..++ +|...|.+++|+|+|++|||||.|++|+|||+++. .....+.+...|.
T Consensus 144 d~~i~iwd~~~~~~~~~~~-----~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~--------~~~~~~~~~~~v~ 210 (393)
T 1erj_A 144 DRLIRIWDIENRKIVMILQ-----GHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTG--------QCSLTLSIEDGVT 210 (393)
T ss_dssp TSCEEEEETTTTEEEEEEC-----CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT--------EEEEEEECSSCEE
T ss_pred CCeEEEEECCCCcEEEEEc-----cCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCC--------eeEEEEEcCCCcE
Confidence 4456667766666666654 56899999999999999999999999999998876 2344455677899
Q ss_pred EEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE--------------EEEEeecCCceEEEecCccce
Q 004987 661 SICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA--------------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 661 ~l~~~~~~~~~laS~s~D~~v~lWD~~tg~~~~~--------------~~~v~~~~~~~~~~~~~~~~~ 715 (720)
+++|+|.++.+||+|+.||+|+|||+++++++.. |++++|++....+.+|+.|..
T Consensus 211 ~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~ 279 (393)
T 1erj_A 211 TVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRS 279 (393)
T ss_dssp EEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred EEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCE
Confidence 9999997778999999999999999999987653 789999999999999988853
No 277
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.44 E-value=2.7e-13 Score=146.73 Aligned_cols=79 Identities=14% Similarity=0.138 Sum_probs=68.1
Q ss_pred CCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe--cCCCCeEEEEEecCCCCEEEEEeCCC
Q 004987 602 DLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM--ASRSKLSSICWNSYIKSQIASSNFEG 679 (720)
Q Consensus 602 ~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~--~~~~~i~~l~~~~~~~~~laS~s~D~ 679 (720)
.+.+|...|++|+|+|||++||+||.|++|+|||+.++ .++..+ .|...|++|+|+|+ +.+|||||.|+
T Consensus 264 ~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~--------~~~~~~~~gH~~~V~~v~fSpd-g~~laS~S~D~ 334 (365)
T 4h5i_A 264 QVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDL--------SMSKIFKQAHSFAITEVTISPD-STYVASVSAAN 334 (365)
T ss_dssp EEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTT--------EEEEEETTSSSSCEEEEEECTT-SCEEEEEETTS
T ss_pred eecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCC--------cEEEEecCcccCCEEEEEECCC-CCEEEEEeCCC
Confidence 45667899999999999999999999999999999876 345443 35778999999995 57999999999
Q ss_pred cEEEEECCCC
Q 004987 680 VVQVGQVLHL 689 (720)
Q Consensus 680 ~v~lWD~~tg 689 (720)
||||||+.++
T Consensus 335 tvrvw~ip~~ 344 (365)
T 4h5i_A 335 TIHIIKLPLN 344 (365)
T ss_dssp EEEEEECCTT
T ss_pred eEEEEEcCCC
Confidence 9999999754
No 278
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.44 E-value=3.3e-13 Score=149.14 Aligned_cols=106 Identities=10% Similarity=0.060 Sum_probs=84.8
Q ss_pred CCCCCeEEEEECC-CCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCeEEEEEecCCCCEEEEEeCCCcEEE
Q 004987 605 NSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQV 683 (720)
Q Consensus 605 ~~~~~V~sv~f~~-dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~laS~s~D~~v~l 683 (720)
+|...|+||+|+| ++.+|||||.|++|+|||+.+... ...+....|.+.|++|+|+|.++++|+|||.||+|+|
T Consensus 117 ~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~-----~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~i 191 (435)
T 4e54_B 117 PFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDK-----PTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRL 191 (435)
T ss_dssp ECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSC-----CEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEE
T ss_pred CCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCc-----eeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEE
Confidence 4578899999999 567999999999999999876521 0111123467889999999987889999999999999
Q ss_pred EECCCCcEEEE---------EEEEeecCCceEEEecCccce
Q 004987 684 GQVLHLIYFSA---------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 684 WD~~tg~~~~~---------~~~v~~~~~~~~~~~~~~~~~ 715 (720)
||++++..... +.+++|++....+..|+.|..
T Consensus 192 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~ 232 (435)
T 4e54_B 192 QDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGN 232 (435)
T ss_dssp EETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSB
T ss_pred eeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCc
Confidence 99988754332 578999999988888887653
No 279
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.43 E-value=1e-12 Score=141.32 Aligned_cols=123 Identities=12% Similarity=0.059 Sum_probs=98.0
Q ss_pred hhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecC---CC
Q 004987 581 EGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS---RS 657 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~---~~ 657 (720)
++..++|...+.+.+..+ .+|.+.|++|+|+|+|.+|||||.|++|+|||++... ++..+.. ..
T Consensus 219 Dg~v~~wd~~~~~~~~~~-----~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~--------~~~~~~~~~~~~ 285 (354)
T 2pbi_B 219 DKKAMVWDMRSGQCVQAF-----ETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADR--------EVAIYSKESIIF 285 (354)
T ss_dssp TSCEEEEETTTCCEEEEE-----CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE--------EEEEECCTTCCS
T ss_pred CCeEEEEECCCCcEEEEe-----cCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCc--------EEEEEcCCCccc
Confidence 444555555555555444 4568999999999999999999999999999987651 2222222 23
Q ss_pred CeEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceEE
Q 004987 658 KLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 658 ~i~~l~~~~~~~~~laS~s~D~~v~lWD~~tg~~~~~-------~~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
.+++++|+|+ +.+||+|+.|++|+|||+.+++++.. |++++|+|....+.+|+.|..-+
T Consensus 286 ~~~~~~~s~~-g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~ 351 (354)
T 2pbi_B 286 GASSVDFSLS-GRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLR 351 (354)
T ss_dssp CEEEEEECTT-SSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEE
T ss_pred ceeEEEEeCC-CCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEE
Confidence 6899999994 67999999999999999999998876 89999999999999999886443
No 280
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.43 E-value=1.1e-12 Score=137.37 Aligned_cols=121 Identities=12% Similarity=0.160 Sum_probs=97.5
Q ss_pred hhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCe
Q 004987 581 EGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKL 659 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i 659 (720)
++..++|.....+.+..+ .+|...|.+++|+|||++||+||.|++|+|||+.+. .++..+. |...|
T Consensus 44 dg~i~iw~~~~~~~~~~~-----~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~--------~~~~~~~~~~~~v 110 (312)
T 4ery_A 44 DKLIKIWGAYDGKFEKTI-----SGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSG--------KCLKTLKGHSNYV 110 (312)
T ss_dssp TSCEEEEETTTCCEEEEE-----CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC--------CEEEEEECCSSCE
T ss_pred CCeEEEEeCCCcccchhh-----ccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCC--------cEEEEEcCCCCCE
Confidence 344455555444444444 456889999999999999999999999999998765 2344443 46779
Q ss_pred EEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccce
Q 004987 660 SSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 660 ~~l~~~~~~~~~laS~s~D~~v~lWD~~tg~~~~~-------~~~v~~~~~~~~~~~~~~~~~ 715 (720)
.+++|+|+ +++||||+.|++|+|||+++++++.+ |.+++|++....+..++.|..
T Consensus 111 ~~~~~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 172 (312)
T 4ery_A 111 FCCNFNPQ-SNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGL 172 (312)
T ss_dssp EEEEECSS-SSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred EEEEEcCC-CCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCc
Confidence 99999995 57999999999999999999998876 889999999888888887753
No 281
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.42 E-value=1.3e-12 Score=141.79 Aligned_cols=128 Identities=8% Similarity=0.079 Sum_probs=103.1
Q ss_pred hhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECC-CCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCC
Q 004987 580 LEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRS 657 (720)
Q Consensus 580 ~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~-dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~ 657 (720)
.++.+++|...+.+.+..+...-..+|...|.+++|++ ++.+|||||.|++|+|||++... .++..+ .|.+
T Consensus 178 ~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~-------~~~~~~~~h~~ 250 (380)
T 3iz6_a 178 GDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITS-------RAVRTYHGHEG 250 (380)
T ss_dssp TTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTC-------CCCEEECCCSS
T ss_pred CCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCC-------cceEEECCcCC
Confidence 45567777777777776665444567899999999987 88999999999999999987431 234444 3577
Q ss_pred CeEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE--------------EEEEeecCCceEEEecCccce
Q 004987 658 KLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA--------------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 658 ~i~~l~~~~~~~~~laS~s~D~~v~lWD~~tg~~~~~--------------~~~v~~~~~~~~~~~~~~~~~ 715 (720)
.|.+|+|+|+ +.+||||+.||+|+|||+++|+++.. |++++|++....+..|+-|..
T Consensus 251 ~v~~v~~~p~-~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~ 321 (380)
T 3iz6_a 251 DINSVKFFPD-GQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGD 321 (380)
T ss_dssp CCCEEEECTT-SSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSC
T ss_pred CeEEEEEecC-CCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCC
Confidence 8999999995 57999999999999999999998875 578999999988888876643
No 282
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.41 E-value=1.3e-12 Score=139.73 Aligned_cols=105 Identities=12% Similarity=0.140 Sum_probs=86.4
Q ss_pred CCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCeEEEEEecCCCCEEEEEeCCCcEE
Q 004987 604 LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGVVQ 682 (720)
Q Consensus 604 ~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~~~~~~~~~laS~s~D~~v~ 682 (720)
.+|...|.+|+|+|||++|||||.|++|+|||+..... .++..+ .|...|.+|+|+|+ +++||||+.|++|+
T Consensus 58 ~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~------~~~~~~~~h~~~v~~v~~sp~-~~~l~s~s~D~~v~ 130 (345)
T 3fm0_A 58 EGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDF------ECVTTLEGHENEVKSVAWAPS-GNLLATCSRDKSVW 130 (345)
T ss_dssp SSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-E------EEEEEECCCSSCEEEEEECTT-SSEEEEEETTSCEE
T ss_pred cccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCe------EEEEEccCCCCCceEEEEeCC-CCEEEEEECCCeEE
Confidence 47899999999999999999999999999999765411 123344 34678999999994 67999999999999
Q ss_pred EEECCCCc---EEEE-------EEEEeecCCceEEEecCccce
Q 004987 683 VGQVLHLI---YFSA-------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 683 lWD~~tg~---~~~~-------~~~v~~~~~~~~~~~~~~~~~ 715 (720)
|||+.++. ++.. |.+++|++....+.+|+.|..
T Consensus 131 iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~ 173 (345)
T 3fm0_A 131 VWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDT 173 (345)
T ss_dssp EEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSC
T ss_pred EEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCc
Confidence 99998874 3332 899999999998888888753
No 283
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.40 E-value=2e-12 Score=139.07 Aligned_cols=105 Identities=9% Similarity=0.017 Sum_probs=90.7
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCeEEEEEecC-CCCEEEEEeCCCc
Q 004987 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSY-IKSQIASSNFEGV 680 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~l~~~~~-~~~~laS~s~D~~ 680 (720)
+.+|.+.|.+++|+|++.+|+|||.|++|+|||+.+. .++..+. |...|.+++|+|. .+++||||+.||+
T Consensus 150 ~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~--------~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~ 221 (354)
T 2pbi_B 150 VAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESG--------QLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKK 221 (354)
T ss_dssp EEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTC--------CEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSC
T ss_pred eeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCC--------eEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCe
Confidence 3457899999999999999999999999999998776 2444443 4677999999985 3579999999999
Q ss_pred EEEEECCCCcEEEE-------EEEEeecCCceEEEecCccce
Q 004987 681 VQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 681 v~lWD~~tg~~~~~-------~~~v~~~~~~~~~~~~~~~~~ 715 (720)
|++||+++++++.+ |++++|+|....+.+|+.|..
T Consensus 222 v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~ 263 (354)
T 2pbi_B 222 AMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDAT 263 (354)
T ss_dssp EEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred EEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCe
Confidence 99999999999876 899999999999999888753
No 284
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.40 E-value=3.2e-12 Score=134.53 Aligned_cols=117 Identities=9% Similarity=0.104 Sum_probs=91.8
Q ss_pred cceEEeeeeccCCCCCCCCCeEEEEECCC-CCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCeEEEEEecC
Q 004987 590 SKLRVKADLNQGDLLNSSNLVCSLSFDRD-GELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSY 667 (720)
Q Consensus 590 ~~~~~~~~l~~~~~~~~~~~V~sv~f~~d-g~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~l~~~~~ 667 (720)
.++++.++| .||.+.|++|+|+|+ +++|||||.|++|||||+.+.... ...+...+. |...|++++|+|+
T Consensus 26 ~~~~l~~tL-----~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~---~~~~~~~l~~h~~~V~~~~~s~d 97 (340)
T 4aow_A 26 EQMTLRGTL-----KGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETN---YGIPQRALRGHSHFVSDVVISSD 97 (340)
T ss_dssp CEEEEEEEE-----CCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSC---SEEEEEEECCCSSCEEEEEECTT
T ss_pred CceEEEEEE-----CCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcc---cceeeEEEeCCCCCEEEEEECCC
Confidence 445555555 567999999999998 689999999999999998764211 113444554 4678999999995
Q ss_pred CCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccce
Q 004987 668 IKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 668 ~~~~laS~s~D~~v~lWD~~tg~~~~~-------~~~v~~~~~~~~~~~~~~~~~ 715 (720)
+.+||||+.|++|++||...+..... +.++.+++....+.+++.|..
T Consensus 98 -g~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~ 151 (340)
T 4aow_A 98 -GQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKT 151 (340)
T ss_dssp -SSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSC
T ss_pred -CCEEEEEcccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCe
Confidence 57999999999999999999987765 677788888877777776654
No 285
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.40 E-value=1.9e-12 Score=135.40 Aligned_cols=108 Identities=19% Similarity=0.168 Sum_probs=87.4
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCeEEEEEecC-CCCEEEEEeCCCc
Q 004987 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSY-IKSQIASSNFEGV 680 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~~~~~-~~~~laS~s~D~~ 680 (720)
+.+|.+.|.+|+|+|||++||||+.|++|+|||+.+.... ...+..+ .|...|.+++|+|. ++++||||+.||+
T Consensus 7 ~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~----~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~ 82 (351)
T 3f3f_A 7 DSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSN----WELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKT 82 (351)
T ss_dssp ECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCC----EEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSC
T ss_pred CcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCc----ceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCe
Confidence 4678999999999999999999999999999998764211 1123333 45778999999995 4679999999999
Q ss_pred EEEEECCCC---------cEEEE-------EEEEeecCC--ceEEEecCccc
Q 004987 681 VQVGQVLHL---------IYFSA-------LYCIVLNKL--LIIFRYGMFQE 714 (720)
Q Consensus 681 v~lWD~~tg---------~~~~~-------~~~v~~~~~--~~~~~~~~~~~ 714 (720)
|+|||+.++ +++.. |++++|++. ...+..++.|.
T Consensus 83 v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg 134 (351)
T 3f3f_A 83 VKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDG 134 (351)
T ss_dssp EEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTC
T ss_pred EEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCC
Confidence 999999988 44544 899999998 77777777664
No 286
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.40 E-value=8.6e-13 Score=140.18 Aligned_cols=105 Identities=10% Similarity=-0.000 Sum_probs=77.1
Q ss_pred CCCCCeEEEEECC---CCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CC---CCeEEEE--------------
Q 004987 605 NSSNLVCSLSFDR---DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SR---SKLSSIC-------------- 663 (720)
Q Consensus 605 ~~~~~V~sv~f~~---dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~---~~i~~l~-------------- 663 (720)
+|+..|+.++|++ |+++|||||.|++|||||+.++. .+.++. ++ ..|.+++
T Consensus 176 ~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk--------~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~ 247 (356)
T 2w18_A 176 LMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQ--------LLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHP 247 (356)
T ss_dssp ECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCC--------EEEEEECCC---CCCEEEEEEETTEEEEEEC--
T ss_pred cCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCc--------EEEEEcCCCcceeeeEEEEECCCCCEEEEeccC
Confidence 4588889999998 77999999999999999998762 111111 00 0111111
Q ss_pred -----------------EecCC-------------C------------CEEEEEeCCCcEEEEECCCCcEEEE-------
Q 004987 664 -----------------WNSYI-------------K------------SQIASSNFEGVVQVGQVLHLIYFSA------- 694 (720)
Q Consensus 664 -----------------~~~~~-------------~------------~~laS~s~D~~v~lWD~~tg~~~~~------- 694 (720)
|++.. + .++||++.|+||||||+.+|+++++
T Consensus 248 ~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~ 327 (356)
T 2w18_A 248 CAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVKDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQ 327 (356)
T ss_dssp ----------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEETTEEEEEETTSCEEEEETTTCSEEEEECCC--C
T ss_pred CCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccCCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCC
Confidence 44221 1 1479999999999999999999987
Q ss_pred EE-EEeecCCceEEEecCccceEE
Q 004987 695 LY-CIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 695 ~~-~v~~~~~~~~~~~~~~~~~~~ 717 (720)
+. +++|+|....+.+|+.|.--+
T Consensus 328 vvs~vafSPDG~~LaSGS~D~TIk 351 (356)
T 2w18_A 328 HWSFVKWSGTDSHLLAGQKDGNIF 351 (356)
T ss_dssp CCCEEEECSSSSEEEEECTTSCEE
T ss_pred eEEEEEECCCCCEEEEEECCCcEE
Confidence 34 589999999999999997544
No 287
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.40 E-value=1.2e-12 Score=142.04 Aligned_cols=106 Identities=12% Similarity=0.109 Sum_probs=88.6
Q ss_pred CCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec--------CCCCeEEEEEecCCCCEEE
Q 004987 602 DLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA--------SRSKLSSICWNSYIKSQIA 673 (720)
Q Consensus 602 ~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~--------~~~~i~~l~~~~~~~~~la 673 (720)
.+.+|.+.|++|+|+|||.+|||||.|++|+|||+++.. ++..+. +...|++++|+|+ +.+||
T Consensus 244 ~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~--------~~~~~~~~~~~~~~~~~~v~~~~~s~~-g~~l~ 314 (380)
T 3iz6_a 244 TYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGH--------QLQVYNREPDRNDNELPIVTSVAFSIS-GRLLF 314 (380)
T ss_dssp EECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTE--------EEEEECCCCSSSCCSSCSCSEEEECSS-SSEEE
T ss_pred EECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCc--------EEEEecccccccccccCceEEEEECCC-CCEEE
Confidence 356789999999999999999999999999999998752 121111 1234899999995 57999
Q ss_pred EEeCCCcEEEEECCCCcEEEE-----------EEEEeecCCceEEEecCccceE
Q 004987 674 SSNFEGVVQVGQVLHLIYFSA-----------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 674 S~s~D~~v~lWD~~tg~~~~~-----------~~~v~~~~~~~~~~~~~~~~~~ 716 (720)
+|+.||+|+|||+.+++.+.. |+|++|++....+.+|+.|..-
T Consensus 315 ~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i 368 (380)
T 3iz6_a 315 AGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNL 368 (380)
T ss_dssp EECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCE
T ss_pred EEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCE
Confidence 999999999999999988764 7899999999999999998643
No 288
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.40 E-value=3.2e-12 Score=139.28 Aligned_cols=113 Identities=11% Similarity=0.133 Sum_probs=93.0
Q ss_pred CCCCCCCCeEEEEECC-CCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCeEEEEEecCCCCEEEEEeCCC
Q 004987 602 DLLNSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEG 679 (720)
Q Consensus 602 ~~~~~~~~V~sv~f~~-dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~~~~~~~~~laS~s~D~ 679 (720)
.+.+|.+.|.+++|+| ++.+||||+.|++|+|||+.+.... .....++..+ .|...|.+|+|+|++.++||||+.||
T Consensus 76 ~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~-~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg 154 (402)
T 2aq5_A 76 LVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLV-LPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDN 154 (402)
T ss_dssp CBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCS-SCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTS
T ss_pred eEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCc-cccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCC
Confidence 4668899999999999 9999999999999999998765211 1111244444 35778999999997768999999999
Q ss_pred cEEEEECCCCcEEEE---------EEEEeecCCceEEEecCccce
Q 004987 680 VVQVGQVLHLIYFSA---------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 680 ~v~lWD~~tg~~~~~---------~~~v~~~~~~~~~~~~~~~~~ 715 (720)
+|+|||+.+++++.+ |++++|++....+..++.|..
T Consensus 155 ~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 199 (402)
T 2aq5_A 155 VILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKR 199 (402)
T ss_dssp CEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSE
T ss_pred EEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCc
Confidence 999999999998765 689999999888888877753
No 289
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.39 E-value=1e-12 Score=142.25 Aligned_cols=108 Identities=6% Similarity=-0.007 Sum_probs=88.8
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCC----cEEEeeCCcccccccccccceEEe-cCCCCeEEEEEecCCCCEEEEEeC
Q 004987 603 LLNSSNLVCSLSFDRDGELFAAAGVNK----KIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNF 677 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~----~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~~~~~~~~~laS~s~ 677 (720)
+.+|...|++|+|+|||+++++|+.|+ +|++||........ .....+ .+...|++|+|+|+ +.+||||+.
T Consensus 215 ~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~----~~~~~~~~~~~~V~~~~~Spd-g~~lasgs~ 289 (365)
T 4h5i_A 215 DFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSV----LRSKQVTNRFKGITSMDVDMK-GELAVLASN 289 (365)
T ss_dssp CCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEE----EEEEEEESSCSCEEEEEECTT-SCEEEEEET
T ss_pred cCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecc----eeeeeecCCCCCeEeEEECCC-CCceEEEcC
Confidence 345788999999999999999999998 68889865542110 112223 34667999999995 579999999
Q ss_pred CCcEEEEECCCCcEEEE--------EEEEeecCCceEEEecCccce
Q 004987 678 EGVVQVGQVLHLIYFSA--------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 678 D~~v~lWD~~tg~~~~~--------~~~v~~~~~~~~~~~~~~~~~ 715 (720)
|++|+|||+.+++++.+ |++|+|+|.+..+.+|+.|.-
T Consensus 290 D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~t 335 (365)
T 4h5i_A 290 DNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANT 335 (365)
T ss_dssp TSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSE
T ss_pred CCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCe
Confidence 99999999999999886 899999999999999999864
No 290
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.38 E-value=4.5e-12 Score=135.32 Aligned_cols=103 Identities=15% Similarity=0.248 Sum_probs=83.1
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCeEEEEEecCCCCEEEEEeCCCcE
Q 004987 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~~~~~~~~~laS~s~D~~v 681 (720)
+.+|...|.+++|+|++.+|||||.|++|+|||+++. .++..+ .|...|.+|+|+|+ +.+||||+.|++|
T Consensus 72 l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~--------~~~~~~~~h~~~v~~v~~sp~-~~~l~s~~~d~~i 142 (343)
T 2xzm_R 72 LTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTG--------TTYKRFVGHQSEVYSVAFSPD-NRQILSAGAEREI 142 (343)
T ss_dssp ECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSS--------CEEEEEECCCSCEEEEEECSS-TTEEEEEETTSCE
T ss_pred hccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCC--------cEEEEEcCCCCcEEEEEECCC-CCEEEEEcCCCEE
Confidence 4677999999999999999999999999999998876 233344 45778999999995 5699999999999
Q ss_pred EEEECCCCcEEE---------EEEEEeecCCc----------eEEEecCccc
Q 004987 682 QVGQVLHLIYFS---------ALYCIVLNKLL----------IIFRYGMFQE 714 (720)
Q Consensus 682 ~lWD~~tg~~~~---------~~~~v~~~~~~----------~~~~~~~~~~ 714 (720)
+|||+....... .|.|++|++.. ..+.+++.|.
T Consensus 143 ~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~ 194 (343)
T 2xzm_R 143 KLWNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDG 194 (343)
T ss_dssp EEEESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTS
T ss_pred EEEeccCCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCC
Confidence 999998443222 18899999876 4566666654
No 291
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.38 E-value=3.2e-12 Score=134.53 Aligned_cols=121 Identities=9% Similarity=0.154 Sum_probs=98.8
Q ss_pred hhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCeEE
Q 004987 582 GLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSS 661 (720)
Q Consensus 582 ~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~ 661 (720)
+..+++...+.+++..+. +|.+.|.+|+|+|||++|||||.|++|+|||+.+. .++..+.+...|.+
T Consensus 195 ~~i~i~d~~~~~~~~~~~-----~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~--------~~~~~~~~~~~v~~ 261 (340)
T 4aow_A 195 KLVKVWNLANCKLKTNHI-----GHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEG--------KHLYTLDGGDIINA 261 (340)
T ss_dssp SCEEEEETTTTEEEEEEC-----CCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTT--------EEEEEEECSSCEEE
T ss_pred CEEEEEECCCCceeeEec-----CCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccC--------ceeeeecCCceEEe
Confidence 345666666666666664 45899999999999999999999999999998776 35566677788999
Q ss_pred EEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE----------------EEEEeecCCceEEEecCccceEE
Q 004987 662 ICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA----------------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 662 l~~~~~~~~~laS~s~D~~v~lWD~~tg~~~~~----------------~~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
++|+|. + .+++++.|++|+|||++++.++.+ |++++|++....+.+|+.|..-+
T Consensus 262 ~~~~~~-~-~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~ 331 (340)
T 4aow_A 262 LCFSPN-R-YWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVR 331 (340)
T ss_dssp EEECSS-S-SEEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEE
T ss_pred eecCCC-C-ceeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEE
Confidence 999994 3 466677799999999999887654 79999999999999998886443
No 292
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.37 E-value=5.2e-12 Score=133.58 Aligned_cols=122 Identities=9% Similarity=0.047 Sum_probs=99.3
Q ss_pred hhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEE-ecCCCC
Q 004987 580 LEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVE-MASRSK 658 (720)
Q Consensus 580 ~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~ 658 (720)
.++..++|...+.+.+..+. +|...|.+|+|+|++.+|||||.|++|+|||++.. ++.. ..|...
T Consensus 85 ~D~~v~~wd~~~~~~~~~~~-----~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~---------~~~~~~~h~~~ 150 (319)
T 3frx_A 85 WDKTLRLWDVATGETYQRFV-----GHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQ---------CLATLLGHNDW 150 (319)
T ss_dssp TTSEEEEEETTTTEEEEEEE-----CCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSC---------EEEEECCCSSC
T ss_pred CCCEEEEEECCCCCeeEEEc-----cCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC---------eEEEEeccCCc
Confidence 34566777776666666654 56899999999999999999999999999998643 2223 345778
Q ss_pred eEEEEEecCC-----CCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccce
Q 004987 659 LSSICWNSYI-----KSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 659 i~~l~~~~~~-----~~~laS~s~D~~v~lWD~~tg~~~~~-------~~~v~~~~~~~~~~~~~~~~~ 715 (720)
|.+++|+|.. ..+|+|++.|++|++||+++++...+ |++++|+|....+.+|+.|..
T Consensus 151 v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~ 219 (319)
T 3frx_A 151 VSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGE 219 (319)
T ss_dssp EEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCE
T ss_pred EEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCe
Confidence 9999999853 34899999999999999999988765 899999999999999988753
No 293
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.37 E-value=5.6e-12 Score=137.40 Aligned_cols=99 Identities=11% Similarity=0.157 Sum_probs=83.6
Q ss_pred CCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCeEEEEEecCCCCEEEEEeCCCcEEEEE
Q 004987 607 SNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEGVVQVGQ 685 (720)
Q Consensus 607 ~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~l~~~~~~~~~laS~s~D~~v~lWD 685 (720)
...|.+|+|+|||++||||+.|++|+|||+.+. ..+..+. |...|.+++|+|+ +.+|+||+.|++|+|||
T Consensus 123 ~~~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~--------~~~~~~~~h~~~v~~~~~~p~-~~~l~s~s~d~~v~iwd 193 (393)
T 1erj_A 123 DLYIRSVCFSPDGKFLATGAEDRLIRIWDIENR--------KIVMILQGHEQDIYSLDYFPS-GDKLVSGSGDRTVRIWD 193 (393)
T ss_dssp CCBEEEEEECTTSSEEEEEETTSCEEEEETTTT--------EEEEEECCCSSCEEEEEECTT-SSEEEEEETTSEEEEEE
T ss_pred ceeEEEEEECCCCCEEEEEcCCCeEEEEECCCC--------cEEEEEccCCCCEEEEEEcCC-CCEEEEecCCCcEEEEE
Confidence 446999999999999999999999999998765 2333443 4677999999995 57999999999999999
Q ss_pred CCCCcEEEE------EEEEeecC-CceEEEecCccc
Q 004987 686 VLHLIYFSA------LYCIVLNK-LLIIFRYGMFQE 714 (720)
Q Consensus 686 ~~tg~~~~~------~~~v~~~~-~~~~~~~~~~~~ 714 (720)
+++++++.+ +.+++|++ ....+..|+.|.
T Consensus 194 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~s~d~ 229 (393)
T 1erj_A 194 LRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDR 229 (393)
T ss_dssp TTTTEEEEEEECSSCEEEEEECSTTCCEEEEEETTS
T ss_pred CCCCeeEEEEEcCCCcEEEEEECCCCCEEEEEcCCC
Confidence 999998876 78999998 677777777664
No 294
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.36 E-value=5.8e-12 Score=133.56 Aligned_cols=102 Identities=8% Similarity=0.047 Sum_probs=87.9
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCeEEEEEecCCCCEEEEEeCCCcE
Q 004987 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~l~~~~~~~~~laS~s~D~~v 681 (720)
|.+|.+.|.+++|+|||++||+|+.|++|+|||+.+. .++..+. |...|.+++|+| ++++||+++.||+|
T Consensus 28 l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~--------~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~dg~i 98 (369)
T 3zwl_B 28 LTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNG--------ERLGTLDGHTGTIWSIDVDC-FTKYCVTGSADYSI 98 (369)
T ss_dssp EECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTC--------CEEEEECCCSSCEEEEEECT-TSSEEEEEETTTEE
T ss_pred EEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCc--------hhhhhhhhcCCcEEEEEEcC-CCCEEEEEeCCCeE
Confidence 3467999999999999999999999999999998765 2444454 577899999999 46799999999999
Q ss_pred EEEECCCCcEEEE------EEEEeecCCceEEEecCcc
Q 004987 682 QVGQVLHLIYFSA------LYCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 682 ~lWD~~tg~~~~~------~~~v~~~~~~~~~~~~~~~ 713 (720)
+|||+.+++++.. +.+++|++....+..+..+
T Consensus 99 ~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~ 136 (369)
T 3zwl_B 99 KLWDVSNGQCVATWKSPVPVKRVEFSPCGNYFLAILDN 136 (369)
T ss_dssp EEEETTTCCEEEEEECSSCEEEEEECTTSSEEEEEECC
T ss_pred EEEECCCCcEEEEeecCCCeEEEEEccCCCEEEEecCC
Confidence 9999999999887 7899999988887776554
No 295
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.35 E-value=2.5e-12 Score=138.63 Aligned_cols=126 Identities=13% Similarity=0.053 Sum_probs=99.3
Q ss_pred hhhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCC-EEEEeeCCCcEEEeeCCcccccccccccceEEecCCC
Q 004987 579 FLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGE-LFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRS 657 (720)
Q Consensus 579 f~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~-~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 657 (720)
-.++..++|...+.+++..++ +|.+.|++|+|+|++. +|++|+.|++|+|||+++..... .+....+..
T Consensus 158 s~dg~v~iwd~~~~~~~~~~~-----~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~-----~~~~~~~~~ 227 (357)
T 4g56_B 158 GKDFSVKVWDLSQKAVLKSYN-----AHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPAT-----RIDFCASDT 227 (357)
T ss_dssp ETTSCEEEEETTTTEEEEEEC-----CCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBC-----BCCCTTCCS
T ss_pred eCCCeEEEEECCCCcEEEEEc-----CCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceee-----eeeeccccc
Confidence 345566777777777777765 4589999999999986 79999999999999988762110 011112356
Q ss_pred CeEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCc-eEEEecCccc
Q 004987 658 KLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLL-IIFRYGMFQE 714 (720)
Q Consensus 658 ~i~~l~~~~~~~~~laS~s~D~~v~lWD~~tg~~~~~-------~~~v~~~~~~-~~~~~~~~~~ 714 (720)
.|.+|+|+|+.+.+||+|+.|++|+|||+++++++++ |++++|++.. ..+.+|+.|.
T Consensus 228 ~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~ 292 (357)
T 4g56_B 228 IPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDC 292 (357)
T ss_dssp CEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTS
T ss_pred cccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCC
Confidence 7999999998888999999999999999999998876 8999999876 4577777664
No 296
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.35 E-value=4.2e-12 Score=136.64 Aligned_cols=103 Identities=15% Similarity=0.138 Sum_probs=82.9
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCc-EEEeeCCcccccccccccceEEec---CCCCeEEEEEecCCCCEEEEEeCC
Q 004987 603 LLNSSNLVCSLSFDRDGELFAAAGVNKK-IKVFECDAIINENRDIHYPVVEMA---SRSKLSSICWNSYIKSQIASSNFE 678 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~-i~iwd~~~~~~~~~~~~~~~~~~~---~~~~i~~l~~~~~~~~~laS~s~D 678 (720)
+.+|.+.|.+|+|+|||++|||||.|++ |+|||+++. .++..+. |...|.+|+|+|+ +.+|||++.|
T Consensus 191 ~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~--------~~~~~~~~g~h~~~v~~~~~s~~-~~~l~s~s~d 261 (355)
T 3vu4_A 191 IKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDG--------VLVREFRRGLDRADVVDMKWSTD-GSKLAVVSDK 261 (355)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTC--------CEEEEEECTTCCSCEEEEEECTT-SCEEEEEETT
T ss_pred EEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCC--------cEEEEEEcCCCCCcEEEEEECCC-CCEEEEEECC
Confidence 4567999999999999999999999999 999999876 2444554 6778999999995 5799999999
Q ss_pred CcEEEEECCCCcEEE--E----------------------------EEEEeecCCceEEEecCccc
Q 004987 679 GVVQVGQVLHLIYFS--A----------------------------LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 679 ~~v~lWD~~tg~~~~--~----------------------------~~~v~~~~~~~~~~~~~~~~ 714 (720)
++|+|||+.++.... . ..+++|++....+..+.-|.
T Consensus 262 ~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg 327 (355)
T 3vu4_A 262 WTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTR 327 (355)
T ss_dssp CEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTTT
T ss_pred CEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCC
Confidence 999999998764211 0 15578888887777776554
No 297
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.35 E-value=6.6e-12 Score=145.27 Aligned_cols=106 Identities=11% Similarity=0.102 Sum_probs=90.1
Q ss_pred CCCCCCCCCeEEEEECCCCC-EEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCeEEEEEecCCCCEEEEEeCC
Q 004987 601 GDLLNSSNLVCSLSFDRDGE-LFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFE 678 (720)
Q Consensus 601 ~~~~~~~~~V~sv~f~~dg~-~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~~~~~~~~~laS~s~D 678 (720)
+.+.+|...|++|+|+|++. +|||||.|++|+|||..+. ..+..+ .|...|.+|+|+|+ +.+||||+.|
T Consensus 141 ~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~--------~~~~~l~~H~~~V~~v~fspd-g~~las~s~D 211 (611)
T 1nr0_A 141 GNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPF--------KFKSTFGEHTKFVHSVRYNPD-GSLFASTGGD 211 (611)
T ss_dssp BCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTB--------EEEEEECCCSSCEEEEEECTT-SSEEEEEETT
T ss_pred ceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCC--------eEeeeeccccCceEEEEECCC-CCEEEEEECC
Confidence 45788999999999999997 5999999999999997654 123334 35678999999995 5799999999
Q ss_pred CcEEEEECCCCcEEEE--------------EEEEeecCCceEEEecCccce
Q 004987 679 GVVQVGQVLHLIYFSA--------------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 679 ~~v~lWD~~tg~~~~~--------------~~~v~~~~~~~~~~~~~~~~~ 715 (720)
++|+|||+.+|+++.+ |++++|+|....+.+++.|..
T Consensus 212 ~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~ 262 (611)
T 1nr0_A 212 GTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKT 262 (611)
T ss_dssp SCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSE
T ss_pred CcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCe
Confidence 9999999999987643 789999999999999998863
No 298
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.34 E-value=9.6e-12 Score=130.04 Aligned_cols=108 Identities=13% Similarity=0.113 Sum_probs=85.9
Q ss_pred CCCCCCCeEEEEECCC--CCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCeEEEEEecCC------------
Q 004987 603 LLNSSNLVCSLSFDRD--GELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYI------------ 668 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~d--g~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~------------ 668 (720)
+.+|...|.+|+|+|+ |.+||+|+.|++|+|||+++.... .+.....|...|.+++|+|..
T Consensus 95 ~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~-----~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~ 169 (297)
T 2pm7_B 95 HAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTT-----SPIIIDAHAIGVNSASWAPATIEEDGEHNGTKE 169 (297)
T ss_dssp ECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCB-----CCEEEECCSSCEEEEEECCCC------------
T ss_pred eecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCce-----eeeeeecccCccceEeecCCcccccccCCCCCC
Confidence 3467899999999998 899999999999999998764110 122233457789999999963
Q ss_pred CCEEEEEeCCCcEEEEECCCCc----EEEE-------EEEEeecCCc---eEEEecCccce
Q 004987 669 KSQIASSNFEGVVQVGQVLHLI----YFSA-------LYCIVLNKLL---IIFRYGMFQEV 715 (720)
Q Consensus 669 ~~~laS~s~D~~v~lWD~~tg~----~~~~-------~~~v~~~~~~---~~~~~~~~~~~ 715 (720)
+.+||||+.|++|+|||+++++ ++.+ |++|+|+|.. ..+.+++.|..
T Consensus 170 ~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~ 230 (297)
T 2pm7_B 170 SRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRT 230 (297)
T ss_dssp CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSC
T ss_pred cceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCc
Confidence 4689999999999999999876 4433 8999999984 78888887753
No 299
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.34 E-value=9.1e-12 Score=131.96 Aligned_cols=106 Identities=10% Similarity=0.160 Sum_probs=87.7
Q ss_pred CCCCCCCeEEEEECCC---CCEEEEeeCCCcEEEeeCCcccccccccccceEE-ecCCCCeEEEEEecCCCCEEEEEeCC
Q 004987 603 LLNSSNLVCSLSFDRD---GELFAAAGVNKKIKVFECDAIINENRDIHYPVVE-MASRSKLSSICWNSYIKSQIASSNFE 678 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~d---g~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~i~~l~~~~~~~~~laS~s~D 678 (720)
+.+|.+.|++|+|+|+ |++||+|+.|++|+|||+.+... ..... ..|...|.+++|+| ++++||+++.|
T Consensus 35 ~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~------~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~d 107 (368)
T 3mmy_A 35 TSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQ------TIPKAQQMHTGPVLDVCWSD-DGSKVFTASCD 107 (368)
T ss_dssp SSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSC------EEEEEEEECSSCEEEEEECT-TSSEEEEEETT
T ss_pred ccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCc------eeEEEeccccCCEEEEEECc-CCCEEEEEcCC
Confidence 3567999999999999 69999999999999999876210 11122 34577899999999 56799999999
Q ss_pred CcEEEEECCCCcEEEE------EEEEee--cCCceEEEecCccce
Q 004987 679 GVVQVGQVLHLIYFSA------LYCIVL--NKLLIIFRYGMFQEV 715 (720)
Q Consensus 679 ~~v~lWD~~tg~~~~~------~~~v~~--~~~~~~~~~~~~~~~ 715 (720)
|+|+|||+.+++++.. |++++| ++....+.+++.|..
T Consensus 108 g~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~ 152 (368)
T 3mmy_A 108 KTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKT 152 (368)
T ss_dssp SEEEEEETTTTEEEEEEECSSCEEEEEEEECSSCEEEEEEETTSE
T ss_pred CcEEEEEcCCCCceeeccccCceEEEEEEeCCCCCEEEEccCCCc
Confidence 9999999999998875 899999 888888888877654
No 300
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.33 E-value=6.7e-12 Score=133.09 Aligned_cols=125 Identities=7% Similarity=-0.016 Sum_probs=99.6
Q ss_pred hhhhccccceEEeeeeccCCCCCCCCCeEEEEECCC----CCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCC
Q 004987 583 LCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRD----GELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRS 657 (720)
Q Consensus 583 l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~d----g~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~ 657 (720)
-.++|...+.+.+..++......|...|.+++|+|+ |.+||+|+.|++|+|||+.+. .++..+. +..
T Consensus 45 ~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~--------~~~~~~~~~~~ 116 (366)
T 3k26_A 45 RVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITM--------QCIKHYVGHGN 116 (366)
T ss_dssp EEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTC--------CEEEEEESCCS
T ss_pred EEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhc--------eEeeeecCCCC
Confidence 345566655555556652222346788999999999 779999999999999998765 2344444 577
Q ss_pred CeEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE----------EEEEeecCCceEEEecCccce
Q 004987 658 KLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA----------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 658 ~i~~l~~~~~~~~~laS~s~D~~v~lWD~~tg~~~~~----------~~~v~~~~~~~~~~~~~~~~~ 715 (720)
.|.+++|+|.++++||+|+.||+|+|||+++++.+.. |++++|++....+..++.|..
T Consensus 117 ~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~ 184 (366)
T 3k26_A 117 AINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHS 184 (366)
T ss_dssp CEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred cEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCC
Confidence 8999999996678999999999999999999988765 799999999988888877743
No 301
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.33 E-value=4.7e-12 Score=135.02 Aligned_cols=107 Identities=13% Similarity=0.158 Sum_probs=86.4
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCeEEEEEecC-CCCEEEEEeCCCc
Q 004987 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSY-IKSQIASSNFEGV 680 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~l~~~~~-~~~~laS~s~D~~ 680 (720)
+.+|.+.|.+++|+|||++||+|+.|++|+|||+..... .++..+. |...|.+|+|+|. ++++||||+.||+
T Consensus 7 ~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~------~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~ 80 (379)
T 3jrp_A 7 ANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETH------KLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGK 80 (379)
T ss_dssp EEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEE------EEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSC
T ss_pred ecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcc------eeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCE
Confidence 456799999999999999999999999999999863210 2333443 5778999999874 2679999999999
Q ss_pred EEEEECCCCc--EEEE-------EEEEeecCC--ceEEEecCccce
Q 004987 681 VQVGQVLHLI--YFSA-------LYCIVLNKL--LIIFRYGMFQEV 715 (720)
Q Consensus 681 v~lWD~~tg~--~~~~-------~~~v~~~~~--~~~~~~~~~~~~ 715 (720)
|+|||+.+++ .+.. |++++|++. ...+..++.|..
T Consensus 81 v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~ 126 (379)
T 3jrp_A 81 VLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGK 126 (379)
T ss_dssp EEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSE
T ss_pred EEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCc
Confidence 9999999997 4443 899999998 777777776643
No 302
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.33 E-value=6.2e-12 Score=147.59 Aligned_cols=111 Identities=8% Similarity=0.081 Sum_probs=90.6
Q ss_pred CCCCCCCCCeEEEEECCCC-CEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCeEEEEEecCCCCEEEEEeCC
Q 004987 601 GDLLNSSNLVCSLSFDRDG-ELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFE 678 (720)
Q Consensus 601 ~~~~~~~~~V~sv~f~~dg-~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~~~~~~~~~laS~s~D 678 (720)
+.+.+|.+.|++|+|+|++ .+|||||.|++|+|||+....... ..+...+ .|...|.+|+|+|+ +.+||||+.|
T Consensus 376 ~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~---~~~~~~~~~h~~~v~~v~~s~~-g~~l~sgs~D 451 (694)
T 3dm0_A 376 GTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAY---GVAQRRLTGHSHFVEDVVLSSD-GQFALSGSWD 451 (694)
T ss_dssp EEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCS---CEEEEEEECCSSCEEEEEECTT-SSEEEEEETT
T ss_pred hhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCccc---ccccceecCCCCcEEEEEECCC-CCEEEEEeCC
Confidence 4456789999999999876 799999999999999987542110 0122233 45778999999995 5799999999
Q ss_pred CcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccce
Q 004987 679 GVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 679 ~~v~lWD~~tg~~~~~-------~~~v~~~~~~~~~~~~~~~~~ 715 (720)
|+|+|||+.+++++.+ |+|++|++....+.+++.|..
T Consensus 452 g~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~ 495 (694)
T 3dm0_A 452 GELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRT 495 (694)
T ss_dssp SEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSC
T ss_pred CcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCE
Confidence 9999999999998876 899999999999999888754
No 303
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.31 E-value=2.3e-12 Score=146.50 Aligned_cols=107 Identities=10% Similarity=0.066 Sum_probs=86.1
Q ss_pred CCCCCCCeEEE--EECCCC-CEEEEeeCCCcEEEeeCCcccccccccccceEEecC-C-CCeEEEEEecCCCCEEEEEeC
Q 004987 603 LLNSSNLVCSL--SFDRDG-ELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS-R-SKLSSICWNSYIKSQIASSNF 677 (720)
Q Consensus 603 ~~~~~~~V~sv--~f~~dg-~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~-~~i~~l~~~~~~~~~laS~s~ 677 (720)
+.+|.+.|.+| +|+|+| .+|||||.|++|||||+++.. ++.....+ . ..|.+|+|+|+ +..||+++.
T Consensus 304 ~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~-------~~~~~~~~~~~~~v~~v~fsp~-~~~l~s~~~ 375 (524)
T 2j04_B 304 DQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIA-------TTKTTVSRFRGSNLVPVVYCPQ-IYSYIYSDG 375 (524)
T ss_dssp EECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHH-------HHCEEEEECSCCSCCCEEEETT-TTEEEEECS
T ss_pred eecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCC-------cccccccccccCcccceEeCCC-cCeEEEeCC
Confidence 34678999999 689998 899999999999999987652 11111122 1 35899999996 458999999
Q ss_pred CCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceEE
Q 004987 678 EGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 678 D~~v~lWD~~tg~~~~~-------~~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
|++|+|||+++++++.+ |++|+|+|....+.+|+.|.--.
T Consensus 376 d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~ 422 (524)
T 2j04_B 376 ASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLI 422 (524)
T ss_dssp SSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEE
T ss_pred CCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECCCEEE
Confidence 99999999999988654 89999999999999998886443
No 304
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.30 E-value=1.4e-11 Score=131.30 Aligned_cols=103 Identities=15% Similarity=-0.018 Sum_probs=84.9
Q ss_pred CCCCCeEEEEECC--CCCEEEEeeCCCcEEEeeCCcccccccccccceEEe--cCCCCeEEEEEecCCCCEEEEEeCCCc
Q 004987 605 NSSNLVCSLSFDR--DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM--ASRSKLSSICWNSYIKSQIASSNFEGV 680 (720)
Q Consensus 605 ~~~~~V~sv~f~~--dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~--~~~~~i~~l~~~~~~~~~laS~s~D~~ 680 (720)
+|.+.|.+++|+| +|++|||||.|++|+|||+++.. ++... .+...|.+++|+|+ +.+||+|+.||+
T Consensus 123 ~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~--------~~~~~~~~~~~~i~~~~~~pd-g~~lasg~~dg~ 193 (343)
T 3lrv_A 123 DSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDS--------QYIVHSAKSDVEYSSGVLHKD-SLLLALYSPDGI 193 (343)
T ss_dssp CCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSC--------EEEEECCCSSCCCCEEEECTT-SCEEEEECTTSC
T ss_pred CCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCc--------EEEEEecCCCCceEEEEECCC-CCEEEEEcCCCE
Confidence 4568899999999 99999999999999999988762 22222 23456999999995 679999999999
Q ss_pred EEEEECCCCcEE-EE--------EEEEeecCCceEEEecCccceE
Q 004987 681 VQVGQVLHLIYF-SA--------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 681 v~lWD~~tg~~~-~~--------~~~v~~~~~~~~~~~~~~~~~~ 716 (720)
|+|||+++++.+ .+ |++++|++....+.+++-+.|+
T Consensus 194 i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~~~v~ 238 (343)
T 3lrv_A 194 LDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVECDQTVV 238 (343)
T ss_dssp EEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEESSBEE
T ss_pred EEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEeCCeEE
Confidence 999999999877 33 8999999999988888855554
No 305
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.30 E-value=1.5e-11 Score=133.95 Aligned_cols=100 Identities=13% Similarity=0.123 Sum_probs=81.1
Q ss_pred hhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCe
Q 004987 581 EGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKL 659 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i 659 (720)
++..++|...+.+.+..+ .+|.+.|.+++|+|||++||||+.|++|+|||+.+.. ++..+ .|...|
T Consensus 118 dg~i~iwd~~~~~~~~~~-----~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~--------~~~~~~~h~~~v 184 (420)
T 3vl1_A 118 EGDIKVLDSNFNLQREID-----QAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGS--------NPRTLIGHRATV 184 (420)
T ss_dssp TSCEEEECTTSCEEEEET-----TSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC--------CCEEEECCSSCE
T ss_pred CCCEEEEeCCCcceeeec-----ccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCc--------CceEEcCCCCcE
Confidence 344556666555555554 3568999999999999999999999999999987652 33334 357789
Q ss_pred EEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE
Q 004987 660 SSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA 694 (720)
Q Consensus 660 ~~l~~~~~~~~~laS~s~D~~v~lWD~~tg~~~~~ 694 (720)
.+++|+|+ +.+||||+.||+|+|||+++++++.+
T Consensus 185 ~~~~~~~~-~~~l~s~~~d~~v~iwd~~~~~~~~~ 218 (420)
T 3vl1_A 185 TDIAIIDR-GRNVLSASLDGTIRLWECGTGTTIHT 218 (420)
T ss_dssp EEEEEETT-TTEEEEEETTSCEEEEETTTTEEEEE
T ss_pred EEEEEcCC-CCEEEEEcCCCcEEEeECCCCceeEE
Confidence 99999995 57999999999999999999998876
No 306
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.29 E-value=1.3e-11 Score=140.40 Aligned_cols=102 Identities=15% Similarity=0.198 Sum_probs=86.5
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCeEEEEEecCCCCEEEEEeCCCcE
Q 004987 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~~~~~~~~~laS~s~D~~v 681 (720)
+.+|...|.+++|+|||++||||+.|++|+|||.... ++..+ .|...|++|+|+|+ +.+|||++.||+|
T Consensus 463 ~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~~~---------~~~~~~~h~~~v~~l~~s~d-g~~l~s~~~dg~v 532 (577)
T 2ymu_A 463 LTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQ---------LLQTLTGHSSSVRGVAFSPD-GQTIASASDDKTV 532 (577)
T ss_dssp EECCSSCEEEEEECTTSCEEEEEETTSEEEEEETTSC---------EEEEEECCSSCEEEEEECTT-SSCEEEEETTSEE
T ss_pred EcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCCCC---------EEEEEeCCCCCEEEEEEcCC-CCEEEEEECcCEE
Confidence 3467899999999999999999999999999995322 33333 45778999999995 5699999999999
Q ss_pred EEEECCCCcEEEE-------EEEEeecCCceEEEecCccce
Q 004987 682 QVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 682 ~lWD~~tg~~~~~-------~~~v~~~~~~~~~~~~~~~~~ 715 (720)
+|||. +|+++.+ |++++|++....+.+++-|..
T Consensus 533 ~lwd~-~~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D~~ 572 (577)
T 2ymu_A 533 KLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASSDKT 572 (577)
T ss_dssp EEECT-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSC
T ss_pred EEEeC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCE
Confidence 99996 7888876 899999999999999888764
No 307
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.28 E-value=2.8e-11 Score=130.44 Aligned_cols=112 Identities=11% Similarity=0.137 Sum_probs=90.4
Q ss_pred cceEEeeeeccCCCCCCCCCeEEEEECCCC-CEEEEeeCCCcEEEeeCCcccccccccccceEEe---cCCCCeEEEEEe
Q 004987 590 SKLRVKADLNQGDLLNSSNLVCSLSFDRDG-ELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM---ASRSKLSSICWN 665 (720)
Q Consensus 590 ~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg-~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~---~~~~~i~~l~~~ 665 (720)
..+++...+ .+|.+.|.+++|+|+| ++||||+.|++|+|||+.+.. ....+ .+...|.+++|+
T Consensus 61 ~~~~~~~~~-----~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~--------~~~~~~~~~h~~~v~~~~~~ 127 (383)
T 3ei3_B 61 KSYKLHRTA-----SPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQN--------KTSFIQGMGPGDAITGMKFN 127 (383)
T ss_dssp TTCEEEEEE-----CCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTT--------CEEEECCCSTTCBEEEEEEE
T ss_pred cccceEEec-----cCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcc--------cceeeecCCcCCceeEEEeC
Confidence 345555555 4568999999999999 899999999999999987652 12222 357889999999
Q ss_pred cCCCCEEEEEeCCCcEEEEECCCCcEEEE----------EEEEeecCCceEEEecCccce
Q 004987 666 SYIKSQIASSNFEGVVQVGQVLHLIYFSA----------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 666 ~~~~~~laS~s~D~~v~lWD~~tg~~~~~----------~~~v~~~~~~~~~~~~~~~~~ 715 (720)
|+++++||+++.|++|+|||+.++ .+.. |++++|++....+..|+.|..
T Consensus 128 ~~~~~~l~s~~~d~~i~iwd~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 186 (383)
T 3ei3_B 128 QFNTNQLFVSSIRGATTLRDFSGS-VIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGR 186 (383)
T ss_dssp TTEEEEEEEEETTTEEEEEETTSC-EEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSE
T ss_pred CCCCCEEEEEeCCCEEEEEECCCC-ceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCC
Confidence 976789999999999999999964 4433 789999999988888877643
No 308
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.28 E-value=1.5e-11 Score=133.28 Aligned_cols=128 Identities=10% Similarity=0.093 Sum_probs=106.3
Q ss_pred hhhhhhccccceEEeeeec-cCCCCCCCCCeEEEEECCCC-CEEEEeeCCC---cEEEeeCCcccccccccccceEEec-
Q 004987 581 EGLCKYLSFSKLRVKADLN-QGDLLNSSNLVCSLSFDRDG-ELFAAAGVNK---KIKVFECDAIINENRDIHYPVVEMA- 654 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~-~~~~~~~~~~V~sv~f~~dg-~~lat~~~d~---~i~iwd~~~~~~~~~~~~~~~~~~~- 654 (720)
++..++|...+.+.+..+. ++...+|...|.+++|+|+| .+||+|+.|+ +|+|||+++.. .++..+.
T Consensus 187 dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~-------~~~~~~~~ 259 (416)
T 2pm9_A 187 SNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNAN-------TPLQTLNQ 259 (416)
T ss_dssp SSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTT-------SCSBCCCS
T ss_pred CCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCC-------CCcEEeec
Confidence 3455677777778888888 56667778999999999998 6899999999 99999988752 2333333
Q ss_pred -CCCCeEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCc-eEEEecCccce
Q 004987 655 -SRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLL-IIFRYGMFQEV 715 (720)
Q Consensus 655 -~~~~i~~l~~~~~~~~~laS~s~D~~v~lWD~~tg~~~~~-------~~~v~~~~~~-~~~~~~~~~~~ 715 (720)
|...|.+++|+|.++.+||+++.||+|+|||+.+++++.+ |++++|++.. ..+.+++.|..
T Consensus 260 ~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~ 329 (416)
T 2pm9_A 260 GHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNK 329 (416)
T ss_dssp CCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSE
T ss_pred CccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecCCc
Confidence 5678999999996678999999999999999999999886 7899999998 78888888754
No 309
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.27 E-value=9.2e-12 Score=138.22 Aligned_cols=109 Identities=16% Similarity=0.181 Sum_probs=85.9
Q ss_pred CCCCeEEEEECCCCCEEE----EeeCCCcEEEeeCCcccccccccccc---eEEec-CCCCeEEEEEecCCCCEEEEEeC
Q 004987 606 SSNLVCSLSFDRDGELFA----AAGVNKKIKVFECDAIINENRDIHYP---VVEMA-SRSKLSSICWNSYIKSQIASSNF 677 (720)
Q Consensus 606 ~~~~V~sv~f~~dg~~la----t~~~d~~i~iwd~~~~~~~~~~~~~~---~~~~~-~~~~i~~l~~~~~~~~~laS~s~ 677 (720)
+...|++|+|+|||++|| ||+.|++|+|||+.+..........+ +..+. |...|.+|+|+|..+++|||++.
T Consensus 91 ~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~ 170 (434)
T 2oit_A 91 MKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLA 170 (434)
T ss_dssp CSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEET
T ss_pred CCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEEC
Confidence 467899999999999999 89999999999986542111000012 22222 46789999999977889999999
Q ss_pred CCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccc
Q 004987 678 EGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 678 D~~v~lWD~~tg~~~~~-------~~~v~~~~~~~~~~~~~~~~ 714 (720)
||+|+|||+++++.+.. |+|++|++....+..|+.|.
T Consensus 171 Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg 214 (434)
T 2oit_A 171 DGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNG 214 (434)
T ss_dssp TSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTS
T ss_pred CCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCC
Confidence 99999999999977643 89999999998888887764
No 310
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.27 E-value=2e-11 Score=137.55 Aligned_cols=100 Identities=15% Similarity=0.135 Sum_probs=79.1
Q ss_pred CCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCC-----CCeEEEEEecCCCCEEEEEeCCC
Q 004987 605 NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASR-----SKLSSICWNSYIKSQIASSNFEG 679 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~-----~~i~~l~~~~~~~~~laS~s~D~ 679 (720)
+|...|.+|+|||||++||+||.|++|+|||.... +..+.++ ..|.+|+|||+ +++||+|+.||
T Consensus 83 ~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~~----------l~~l~~~~~~~~~sv~svafSPD-G~~LAsgs~DG 151 (588)
T 2j04_A 83 QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNKM----------LTNLDSKGNLSSRTYHCFEWNPI-ESSIVVGNEDG 151 (588)
T ss_dssp SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTEE----------EEECCCSSCSTTTCEEEEEECSS-SSCEEEEETTS
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCce----------eeeccCCCccccccEEEEEEcCC-CCEEEEEcCCC
Confidence 34789999999999999999999999999995442 1122222 25999999995 67999999999
Q ss_pred cEEEEECCCCcE-------EE-----------EEEEEeecCCceEEEecCccceEE
Q 004987 680 VVQVGQVLHLIY-------FS-----------ALYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 680 ~v~lWD~~tg~~-------~~-----------~~~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
+|+|||+.++.. +. .|++|+|+|.+ +..++.|.--+
T Consensus 152 tVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVr 205 (588)
T 2j04_A 152 ELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVF 205 (588)
T ss_dssp EEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEE
T ss_pred EEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEE
Confidence 999999999852 22 38999999998 56666666443
No 311
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.27 E-value=2e-11 Score=147.82 Aligned_cols=100 Identities=16% Similarity=0.171 Sum_probs=86.4
Q ss_pred CCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCeEEEEEecCCCCEEEEEeCCCcEEEE
Q 004987 605 NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVG 684 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~laS~s~D~~v~lW 684 (720)
+|.+.|.+|+|+|||++||+|+.|++|+|||.... ..+....+...|.+|+|+| + .+|||++.|++|+||
T Consensus 15 gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~--------~~~~~~~~~~~V~~l~fsp-g-~~L~S~s~D~~v~lW 84 (902)
T 2oaj_A 15 GMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQV--------EVVIKLEDRSAIKEMRFVK-G-IYLVVINAKDTVYVL 84 (902)
T ss_dssp ECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTC--------EEEEECSSCCCEEEEEEET-T-TEEEEEETTCEEEEE
T ss_pred CCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCc--------EEEEEcCCCCCEEEEEEcC-C-CEEEEEECcCeEEEE
Confidence 56899999999999999999999999999997654 1233344577899999999 4 499999999999999
Q ss_pred ECCCCcEEEE------EEEEeecCCceEEEecCccc
Q 004987 685 QVLHLIYFSA------LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 685 D~~tg~~~~~------~~~v~~~~~~~~~~~~~~~~ 714 (720)
|+.+++++.+ |+|++|++....+..|+-|.
T Consensus 85 d~~~~~~~~~~~~~~~V~~v~~sp~g~~l~sgs~dg 120 (902)
T 2oaj_A 85 SLYSQKVLTTVFVPGKITSIDTDASLDWMLIGLQNG 120 (902)
T ss_dssp ETTTCSEEEEEECSSCEEEEECCTTCSEEEEEETTS
T ss_pred ECCCCcEEEEEcCCCCEEEEEECCCCCEEEEEcCCC
Confidence 9999999876 89999999998888887664
No 312
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.26 E-value=2.1e-11 Score=143.02 Aligned_cols=127 Identities=13% Similarity=0.125 Sum_probs=97.7
Q ss_pred hhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCe
Q 004987 580 LEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKL 659 (720)
Q Consensus 580 ~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i 659 (720)
.++..++|...+.+.+..+ .+|...|.+|+|+|||.+|||||.|++|+|||.......... .....|...|
T Consensus 450 ~Dg~v~vwd~~~~~~~~~~-----~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~----~~~~~h~~~v 520 (694)
T 3dm0_A 450 WDGELRLWDLAAGVSTRRF-----VGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTIS----EGGEGHRDWV 520 (694)
T ss_dssp TTSEEEEEETTTTEEEEEE-----ECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEEC----SSTTSCSSCE
T ss_pred CCCcEEEEECCCCcceeEE-----eCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeec----cCCCCCCCcE
Confidence 3445566666655555544 456899999999999999999999999999997543110000 0001246679
Q ss_pred EEEEEecCC-CCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccce
Q 004987 660 SSICWNSYI-KSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 660 ~~l~~~~~~-~~~laS~s~D~~v~lWD~~tg~~~~~-------~~~v~~~~~~~~~~~~~~~~~ 715 (720)
+|++|+|+. ...|+||+.|++|+|||+++++++.+ |+|++|++....+.+|+.|..
T Consensus 521 ~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~ 584 (694)
T 3dm0_A 521 SCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGV 584 (694)
T ss_dssp EEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSB
T ss_pred EEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCe
Confidence 999999965 35899999999999999999998876 899999999999999988753
No 313
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.25 E-value=1.1e-11 Score=132.92 Aligned_cols=107 Identities=7% Similarity=0.086 Sum_probs=79.6
Q ss_pred CCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCeEEEEEecCCCCEEEEEeCCCc
Q 004987 602 DLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGV 680 (720)
Q Consensus 602 ~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~~~~~~~~~laS~s~D~~ 680 (720)
.+.+|.+.|.+++|+|||++|||||.|++|+|||+.+.. ...++..+ .+...|.+++|+|+ +++||+|+.|++
T Consensus 50 ~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~-----~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~ 123 (377)
T 3dwl_C 50 TFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDG-----TWKQTLVLLRLNRAATFVRWSPN-EDKFAVGSGARV 123 (377)
T ss_dssp CBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC-----------CCCCEEECCCCSSCEEEEECCTT-SSCCEEEESSSC
T ss_pred EEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCC-----ceeeeeEecccCCceEEEEECCC-CCEEEEEecCCe
Confidence 345679999999999999999999999999999987752 00123333 45778999999994 579999999999
Q ss_pred EEEEECCCCcE---EEE--------EEEEeecCCceEEEecCccc
Q 004987 681 VQVGQVLHLIY---FSA--------LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 681 v~lWD~~tg~~---~~~--------~~~v~~~~~~~~~~~~~~~~ 714 (720)
|+|||+.+++. +.. |++++|++....+.+++.|.
T Consensus 124 i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~ 168 (377)
T 3dwl_C 124 ISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADR 168 (377)
T ss_dssp EEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSS
T ss_pred EEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCC
Confidence 99999999873 332 89999999988888888774
No 314
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.24 E-value=9.8e-12 Score=141.33 Aligned_cols=105 Identities=11% Similarity=0.108 Sum_probs=83.4
Q ss_pred CCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCeEEE--EEecCCCCEEEEEeCC
Q 004987 602 DLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSI--CWNSYIKSQIASSNFE 678 (720)
Q Consensus 602 ~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l--~~~~~~~~~laS~s~D 678 (720)
.+.+|...|.||+|++++ +|||||.|++|+|||+++.. .|...+ .|...|.+| +|+|++.++|||||.|
T Consensus 261 ~l~~h~~~v~sv~~s~~~-~lasgs~DgtV~lWD~~~~~-------~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D 332 (524)
T 2j04_B 261 TLSLADSLITTFDFLSPT-TVVCGFKNGFVAEFDLTDPE-------VPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVD 332 (524)
T ss_dssp EECCTTTCEEEEEESSSS-EEEEEETTSEEEEEETTBCS-------SCSEEEECSSSCEEEEEEECCTTSCCEEEEEETT
T ss_pred EEEcCCCCEEEEEecCCC-eEEEEeCCCEEEEEECCCCC-------CceEEeecccccEEEEEEEcCCCCCeEEEEeccC
Confidence 456788999999999865 89999999999999987641 344434 457789999 4566433799999999
Q ss_pred CcEEEEECCCCcEEEE---------EEEEeecCCceEEEecCccc
Q 004987 679 GVVQVGQVLHLIYFSA---------LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 679 ~~v~lWD~~tg~~~~~---------~~~v~~~~~~~~~~~~~~~~ 714 (720)
++|||||+++++++.+ |++|+|+|....+..++.|.
T Consensus 333 ~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~ 377 (524)
T 2j04_B 333 GYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGAS 377 (524)
T ss_dssp SEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSS
T ss_pred CeEEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCC
Confidence 9999999998875432 57899999887777777665
No 315
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.24 E-value=1.4e-11 Score=132.17 Aligned_cols=111 Identities=13% Similarity=0.098 Sum_probs=87.6
Q ss_pred CCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCccccccc----------ccccceEEecCCCCeEEEEEecCCCCEEEEE
Q 004987 606 SSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENR----------DIHYPVVEMASRSKLSSICWNSYIKSQIASS 675 (720)
Q Consensus 606 ~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~----------~~~~~~~~~~~~~~i~~l~~~~~~~~~laS~ 675 (720)
|...|.+++|+|||++||+|+.|++|+|||+.+...... ....++..+.|...|.+++|+|+ +.+||++
T Consensus 145 h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~-~~~l~~~ 223 (377)
T 3dwl_C 145 LRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPS-GNALAYA 223 (377)
T ss_dssp CCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTT-SSCEEEE
T ss_pred cCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCC-CCEEEEE
Confidence 789999999999999999999999999999864311000 01123334456778999999995 5699999
Q ss_pred eCCCcEEEEECCCCcE----EEE-------EEEEeecCCceEEEecCccceEE
Q 004987 676 NFEGVVQVGQVLHLIY----FSA-------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 676 s~D~~v~lWD~~tg~~----~~~-------~~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
+.||+|+|||+.++++ +.+ |++++|++....+..|+-+.+..
T Consensus 224 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~ 276 (377)
T 3dwl_C 224 GHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPIL 276 (377)
T ss_dssp ETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEEE
T ss_pred eCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEEE
Confidence 9999999999999987 443 89999999999998888776543
No 316
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.24 E-value=3.9e-11 Score=145.28 Aligned_cols=109 Identities=14% Similarity=0.101 Sum_probs=86.1
Q ss_pred CCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccc-------c---------------cccc---------------c
Q 004987 605 NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIIN-------E---------------NRDI---------------H 647 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~-------~---------------~~~~---------------~ 647 (720)
+|...|.+|+|+|||++||+|+.|++|||||+.+... . ..+. -
T Consensus 486 ~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 565 (902)
T 2oaj_A 486 AKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGF 565 (902)
T ss_dssp SSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEE
T ss_pred CCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCcc
Confidence 7889999999999999999999999999999875410 0 0000 0
Q ss_pred cceEEec-CCCCeEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------------EEEEeec-----CC---ce
Q 004987 648 YPVVEMA-SRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------------LYCIVLN-----KL---LI 705 (720)
Q Consensus 648 ~~~~~~~-~~~~i~~l~~~~~~~~~laS~s~D~~v~lWD~~tg~~~~~-------------~~~v~~~-----~~---~~ 705 (720)
.|+..+. |.+.|++|+|+|+ + +||+|+.|++|+|||++++..+.. |+||+|+ +. ..
T Consensus 566 ~~~~~l~~h~~~V~svafSpd-G-~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~ 643 (902)
T 2oaj_A 566 MPSTAVHANKGKTSAINNSNI-G-FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSI 643 (902)
T ss_dssp EEEEEECCCSCSEEEEEECBT-S-EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEE
T ss_pred ceeEEEEcCCCcEEEEEecCC-c-EEEEEeCCCcEEEEECCCCeEEEEeehhHhccccccceEEEEEEEEecCCCCCcce
Confidence 1344554 5788999999995 4 999999999999999998876531 9999999 66 47
Q ss_pred EEEecCccce
Q 004987 706 IFRYGMFQEV 715 (720)
Q Consensus 706 ~~~~~~~~~~ 715 (720)
.+.+|+.|..
T Consensus 644 ~l~sgs~D~t 653 (902)
T 2oaj_A 644 LMVCGTDMGE 653 (902)
T ss_dssp EEEEEETTSE
T ss_pred EEEEEecCCc
Confidence 7888887754
No 317
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.24 E-value=5.5e-11 Score=128.00 Aligned_cols=111 Identities=13% Similarity=0.193 Sum_probs=83.7
Q ss_pred CCCCCCCeEEEEECC-CCCEEEEeeCCCcEEEeeCCcccccccccccceEEe------cCCCCeEEEEEecCCCCEEEEE
Q 004987 603 LLNSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM------ASRSKLSSICWNSYIKSQIASS 675 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~-dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~------~~~~~i~~l~~~~~~~~~laS~ 675 (720)
+.+|.+.|.+++|+| +|++||||+.|++|+|||+.+..........+.... .+...|.+++|+|+++++|+|+
T Consensus 39 ~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~ 118 (408)
T 4a11_B 39 ERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSS 118 (408)
T ss_dssp CCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEE
T ss_pred eeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEE
Confidence 345799999999999 999999999999999999987522111000000111 2577899999999778899999
Q ss_pred eCCCcEEEEECCCCcEEEE------EEEEeecCCce---EEEecCcc
Q 004987 676 NFEGVVQVGQVLHLIYFSA------LYCIVLNKLLI---IFRYGMFQ 713 (720)
Q Consensus 676 s~D~~v~lWD~~tg~~~~~------~~~v~~~~~~~---~~~~~~~~ 713 (720)
+.||+|++||+.+++.+.. +.++.|++... .+..|..+
T Consensus 119 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (408)
T 4a11_B 119 SFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRG 165 (408)
T ss_dssp ETTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESS
T ss_pred eCCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCC
Confidence 9999999999999998876 67888877543 44444433
No 318
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.23 E-value=2.1e-11 Score=128.79 Aligned_cols=108 Identities=15% Similarity=0.116 Sum_probs=84.7
Q ss_pred CCCCCCCeEEEEECCC-----------------CCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCeEEEEE
Q 004987 603 LLNSSNLVCSLSFDRD-----------------GELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICW 664 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~d-----------------g~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~~ 664 (720)
+.+|...|.+++|+|+ +++|||||.|++|+|||+..... ..++..+ .|...|.+|+|
T Consensus 146 ~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~-----~~~~~~l~~h~~~V~~v~~ 220 (316)
T 3bg1_A 146 NNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQ-----WKEEQKLEAHSDWVRDVAW 220 (316)
T ss_dssp TTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSC-----EEEEECCBCCSSCEEEEEC
T ss_pred eccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCc-----cceeeecccCCCceEEEEe
Confidence 4567889999999998 47999999999999999854310 0123333 34678999999
Q ss_pred ecCC---CCEEEEEeCCCcEEEEECCCC-------cEEEE----EEEEeecCCceEEEecCccce
Q 004987 665 NSYI---KSQIASSNFEGVVQVGQVLHL-------IYFSA----LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 665 ~~~~---~~~laS~s~D~~v~lWD~~tg-------~~~~~----~~~v~~~~~~~~~~~~~~~~~ 715 (720)
+|+. ..+||||+.|++|+|||+.++ +.+.. |++++|++....+.+++.|..
T Consensus 221 sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~ 285 (316)
T 3bg1_A 221 APSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNK 285 (316)
T ss_dssp CCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSC
T ss_pred cCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCe
Confidence 9964 368999999999999999862 23433 999999999988888887754
No 319
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.22 E-value=9.2e-11 Score=127.79 Aligned_cols=103 Identities=13% Similarity=0.282 Sum_probs=88.0
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCeEEEEEecCCCCEEEEEe--CCC
Q 004987 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSN--FEG 679 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~~~~~~~~~laS~s--~D~ 679 (720)
+.+|.+.|.+++|+|||.+||+|+.|++|+|||+++. .++..+ .+...|.+++|+|++..+|++++ .|+
T Consensus 213 ~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~--------~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~ 284 (401)
T 4aez_A 213 LQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSS--------IPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDK 284 (401)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCS--------SEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTC
T ss_pred EcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCC--------CccEEecCCcceEEEEEECCCCCCEEEEecCCCCC
Confidence 4457899999999999999999999999999998775 244444 35778999999998888999976 899
Q ss_pred cEEEEECCCCcEEEE------EEEEeecCCceEEEe--cCcc
Q 004987 680 VVQVGQVLHLIYFSA------LYCIVLNKLLIIFRY--GMFQ 713 (720)
Q Consensus 680 ~v~lWD~~tg~~~~~------~~~v~~~~~~~~~~~--~~~~ 713 (720)
+|++||+.+++++.+ +.+++|++....+.. |.-|
T Consensus 285 ~i~i~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~g~~d 326 (401)
T 4aez_A 285 QIHFWNAATGARVNTVDAGSQVTSLIWSPHSKEIMSTHGFPD 326 (401)
T ss_dssp EEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECTTT
T ss_pred EEEEEECCCCCEEEEEeCCCcEEEEEECCCCCeEEEEeecCC
Confidence 999999999999886 899999998887776 5444
No 320
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.22 E-value=2.7e-11 Score=129.13 Aligned_cols=120 Identities=9% Similarity=-0.051 Sum_probs=89.1
Q ss_pred hhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe--cCCC
Q 004987 580 LEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM--ASRS 657 (720)
Q Consensus 580 ~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~--~~~~ 657 (720)
.++..++|...+.+.+.... .+|...|.+++|+|||.+||+|+.|++|+|||+++... ....+ .|.+
T Consensus 147 ~dg~i~~wd~~~~~~~~~~~----~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~-------~~~~~~~~h~~ 215 (343)
T 3lrv_A 147 NRGTIGFQSYEDDSQYIVHS----AKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQ-------ASSRFPVDEEA 215 (343)
T ss_dssp TTCCEEEEESSSSCEEEEEC----CCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTS-------CCEECCCCTTS
T ss_pred CCCcEEEEECCCCcEEEEEe----cCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCC-------CccEEeccCCC
Confidence 34555666666665544432 12355799999999999999999999999999987621 11222 2577
Q ss_pred CeEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE----------EE--EEeecCCceEEEecCc
Q 004987 658 KLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA----------LY--CIVLNKLLIIFRYGMF 712 (720)
Q Consensus 658 ~i~~l~~~~~~~~~laS~s~D~~v~lWD~~tg~~~~~----------~~--~v~~~~~~~~~~~~~~ 712 (720)
.|.+|+|+|+ +.+|||++ |++|+|||+++++++.+ +. +++|++....+..++-
T Consensus 216 ~v~~l~fs~~-g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~ 280 (343)
T 3lrv_A 216 KIKEVKFADN-GYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSN 280 (343)
T ss_dssp CEEEEEECTT-SSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEET
T ss_pred CEEEEEEeCC-CCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecC
Confidence 8999999995 57999999 56999999999987532 33 5999999888887443
No 321
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.22 E-value=8e-11 Score=126.82 Aligned_cols=102 Identities=10% Similarity=0.133 Sum_probs=86.0
Q ss_pred CCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCeEEEEEecCCCCEEEEEeCCCcEEE
Q 004987 605 NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGVVQV 683 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~~~~~~~~~laS~s~D~~v~l 683 (720)
+|...|.+++|+|+|++||+|+.|++|+|||++.. ++..+ .|...|.+++|+|++..+||||+.|++|+|
T Consensus 161 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~---------~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~i 231 (383)
T 3ei3_B 161 SWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLDGH---------EIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKL 231 (383)
T ss_dssp CSSCCEEEEEEETTTTEEEEEETTSEEEEEETTSC---------EEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEE
T ss_pred CCCCCeEEEEECCCCCEEEEECCCCCEEEEECCCC---------EEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEE
Confidence 45688999999999999999999999999998422 34444 357789999999976559999999999999
Q ss_pred EECCC----CcEEEE------EEEEeecC-CceEEEecCccce
Q 004987 684 GQVLH----LIYFSA------LYCIVLNK-LLIIFRYGMFQEV 715 (720)
Q Consensus 684 WD~~t----g~~~~~------~~~v~~~~-~~~~~~~~~~~~~ 715 (720)
||+++ +.++.. |++++|++ ....+..++.|..
T Consensus 232 wd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~ 274 (383)
T 3ei3_B 232 WDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNE 274 (383)
T ss_dssp EEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESSSE
T ss_pred EeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcCCCc
Confidence 99998 777764 89999999 8888888877643
No 322
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.22 E-value=2.1e-11 Score=134.56 Aligned_cols=101 Identities=8% Similarity=0.079 Sum_probs=84.3
Q ss_pred CCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCeEEEEEecCCCCEEEEEeCCCcEEEE
Q 004987 606 SSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGVVQVG 684 (720)
Q Consensus 606 ~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~~~~~~~~~laS~s~D~~v~lW 684 (720)
+...|++++|+|||.+||+|+.|++|+|||++... +..+ .|...|.+|+|+|++..+||+|+.|++|+||
T Consensus 208 ~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~---------~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iw 278 (435)
T 4e54_B 208 INIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKE---------LWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIW 278 (435)
T ss_dssp CSCCCCCEEEETTTTEEEEECSSSBEEEEESSSCB---------CCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEE
T ss_pred CCccEEEEEECCCCCEEEEEeCCCcEeeeccCcce---------eEEEecccceEEeeeecCCCceEEEEecCcceeeEE
Confidence 35678999999999999999999999999986431 1122 3467899999999888899999999999999
Q ss_pred ECCCCcEEEE----------EEEEeecCCceEEEecCccce
Q 004987 685 QVLHLIYFSA----------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 685 D~~tg~~~~~----------~~~v~~~~~~~~~~~~~~~~~ 715 (720)
|+++++.... |++++|++....+.+++.|..
T Consensus 279 d~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~ 319 (435)
T 4e54_B 279 DLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSE 319 (435)
T ss_dssp ETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSC
T ss_pred ecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCE
Confidence 9998764332 899999999999999888753
No 323
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.22 E-value=4.1e-12 Score=130.93 Aligned_cols=94 Identities=14% Similarity=0.095 Sum_probs=74.3
Q ss_pred eeehhhhcccCCCCCc--eecccceeecCCCCCcEEEEEecCC--C----CHHHHHhCCCCCCCHHHHHHHHHHHHHHHH
Q 004987 64 KHSDGVELTHGDHLRN--QGGLSGVCENEAAIDPFVHAIEWGD--V----SLRQWLDKPKRSVDVYECLHIFRQIVEIVY 135 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnI--V~l~~~~~~~~~~~~~~~lV~E~~g--~----sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~ 135 (720)
..+|..+|.++.|++| ..+++ .. ..++||||.| | +|.+++.. .++.++..++.||+.||.
T Consensus 117 ~~~E~~~l~~l~~~~i~~p~~~~----~~----~~~lVmE~~g~~g~~~~~L~~~~~~----~~~~~~~~i~~qi~~~l~ 184 (258)
T 1zth_A 117 TEKEFRNLERAKEAGVSVPQPYT----YM----KNVLLMEFIGEDELPAPTLVELGRE----LKELDVEGIFNDVVENVK 184 (258)
T ss_dssp HHHHHHHHHHHHHTTCCCCCEEE----EE----TTEEEEECCEETTEECCBHHHHGGG----GGGSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCCeEEE----cC----CCEEEEEecCCCCCccccHHHHhhc----cChHHHHHHHHHHHHHHH
Confidence 4477888888888865 33333 11 3489999953 3 88887632 235578899999999999
Q ss_pred HHH-HcCceeccCCCCcEEEccCCceEEeccCcccCC
Q 004987 136 AAH-SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDS 171 (720)
Q Consensus 136 ~LH-s~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~ 171 (720)
||| +.|||||||||+|||++. .++|+|||++...
T Consensus 185 ~lH~~~givHrDlkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 185 RLYQEAELVHADLSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp HHHHTSCEECSSCSTTSEEESS--SEEECCCTTCEET
T ss_pred HHHHHCCEEeCCCCHHHEEEcC--cEEEEECcccccC
Confidence 999 999999999999999988 9999999999654
No 324
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.21 E-value=8.8e-11 Score=127.80 Aligned_cols=100 Identities=16% Similarity=0.160 Sum_probs=84.9
Q ss_pred CCCCCCCCeEEEEECCCC-CEEEEeeCCCcEEEeeCCcccccccccccceEEe---cCCCCeEEEEEecCCCCEEEEEeC
Q 004987 602 DLLNSSNLVCSLSFDRDG-ELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM---ASRSKLSSICWNSYIKSQIASSNF 677 (720)
Q Consensus 602 ~~~~~~~~V~sv~f~~dg-~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~---~~~~~i~~l~~~~~~~~~laS~s~ 677 (720)
.+.+|...|.+|+|+|+| .+||||+.|++|+|||+.+. .++..+ .|...|.+++|+| ++++||+++.
T Consensus 126 ~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~--------~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~ 196 (402)
T 2aq5_A 126 TLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTG--------AAVLTLGPDVHPDTIYSVDWSR-DGALICTSCR 196 (402)
T ss_dssp EEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTT--------EEEEEECTTTCCSCEEEEEECT-TSSCEEEEET
T ss_pred EecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCC--------CccEEEecCCCCCceEEEEECC-CCCEEEEEec
Confidence 345679999999999999 69999999999999998876 234444 3577899999999 5679999999
Q ss_pred CCcEEEEECCCCcEEEE---------EEEEeecCCceEEEec
Q 004987 678 EGVVQVGQVLHLIYFSA---------LYCIVLNKLLIIFRYG 710 (720)
Q Consensus 678 D~~v~lWD~~tg~~~~~---------~~~v~~~~~~~~~~~~ 710 (720)
||+|+|||+++++++.+ +.++.|++....+..|
T Consensus 197 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g 238 (402)
T 2aq5_A 197 DKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTG 238 (402)
T ss_dssp TSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEE
T ss_pred CCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEe
Confidence 99999999999998876 4688999988888776
No 325
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.20 E-value=8.9e-11 Score=134.00 Aligned_cols=121 Identities=13% Similarity=0.096 Sum_probs=95.7
Q ss_pred hhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec--CCCCe
Q 004987 582 GLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA--SRSKL 659 (720)
Q Consensus 582 ~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~--~~~~i 659 (720)
+..+++.....+... ..+.+|...|.+++|+|||++||+|+.|++|+|||+.+.. ++..+. |...|
T Consensus 467 ~~i~~~~~~~~~~~~----~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~--------~~~~~~~~h~~~v 534 (615)
T 1pgu_A 467 NTIQVFKLSDLEVSF----DLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSRE--------VKTSRWAFRTSKI 534 (615)
T ss_dssp SCEEEEETTEEEEEE----ECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE--------EEECCSCCCSSCE
T ss_pred CeEEEEECCCccccc----cccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCc--------ceeEeecCCCCce
Confidence 334445554443331 3456678999999999999999999999999999998762 333333 57789
Q ss_pred EEEEEecC---------CCCEEEEEeCCCcEEEEECCCC-cEEEE-------EEEEeecCCceEEEecCccce
Q 004987 660 SSICWNSY---------IKSQIASSNFEGVVQVGQVLHL-IYFSA-------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 660 ~~l~~~~~---------~~~~laS~s~D~~v~lWD~~tg-~~~~~-------~~~v~~~~~~~~~~~~~~~~~ 715 (720)
++++|+|. ++.+||+|+.||+|+|||+.++ +++.. |++++|++... +.+++-|..
T Consensus 535 ~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~l~~s~~~~-l~s~~~d~~ 606 (615)
T 1pgu_A 535 NAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPST-LVSSGADAC 606 (615)
T ss_dssp EEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEETTE-EEEEETTSC
T ss_pred eEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCceechhhhcCccceEEEEEcCCCC-eEEecCCce
Confidence 99999992 4579999999999999999998 67775 99999999999 888887764
No 326
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.20 E-value=8.7e-11 Score=139.42 Aligned_cols=103 Identities=10% Similarity=0.020 Sum_probs=88.7
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCeEEEEEecCCCCEEEEEeCCCcE
Q 004987 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~l~~~~~~~~~laS~s~D~~v 681 (720)
+.+|++.|.+++|+|||.+||+|+.|++|+|||+.++ ..+..+. +.+.|.+++|+|+ +++||+|+.||+|
T Consensus 9 ~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~--------~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~dg~i 79 (814)
T 3mkq_A 9 FSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQ--------VEVRSIQVTETPVRAGKFIAR-KNWIIVGSDDFRI 79 (814)
T ss_dssp EEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTT--------EEEEEEECCSSCEEEEEEEGG-GTEEEEEETTSEE
T ss_pred eecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCC--------ceEEEEecCCCcEEEEEEeCC-CCEEEEEeCCCeE
Confidence 3456999999999999999999999999999998775 2344443 5778999999995 5799999999999
Q ss_pred EEEECCCCcEEEE-------EEEEeecCCceEEEecCccc
Q 004987 682 QVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 682 ~lWD~~tg~~~~~-------~~~v~~~~~~~~~~~~~~~~ 714 (720)
+|||+.+|+.+.+ |++++|++....+.+++-|.
T Consensus 80 ~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg 119 (814)
T 3mkq_A 80 RVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDL 119 (814)
T ss_dssp EEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTS
T ss_pred EEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCC
Confidence 9999999998876 89999999998888877664
No 327
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.20 E-value=6.6e-11 Score=126.05 Aligned_cols=102 Identities=12% Similarity=0.153 Sum_probs=84.9
Q ss_pred CCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCeEEEEEecCCCCEEEEEeCCCcEEEE
Q 004987 606 SSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGVVQVG 684 (720)
Q Consensus 606 ~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~~~~~~~~~laS~s~D~~v~lW 684 (720)
|.+.|.+++|+|||++||+|+.|++|+|||+.+... .++..+ .|...|.+++|+| ++++||+++.||+|+||
T Consensus 7 ~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~------~~~~~~~~h~~~v~~~~~~~-~~~~l~~~~~dg~i~vw 79 (372)
T 1k8k_C 7 LVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKW------VQVHELKEHNGQVTGVDWAP-DSNRIVTCGTDRNAYVW 79 (372)
T ss_dssp CSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEE------EEEEEEECCSSCEEEEEEET-TTTEEEEEETTSCEEEE
T ss_pred cCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcE------EeeeeecCCCCcccEEEEeC-CCCEEEEEcCCCeEEEE
Confidence 688999999999999999999999999999766410 133444 3577899999999 46799999999999999
Q ss_pred ECCCCcEEEE---------EEEEeecCCceEEEecCccc
Q 004987 685 QVLHLIYFSA---------LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 685 D~~tg~~~~~---------~~~v~~~~~~~~~~~~~~~~ 714 (720)
|+.+++.... +++++|++....+..++.|.
T Consensus 80 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 118 (372)
T 1k8k_C 80 TLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSR 118 (372)
T ss_dssp EEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred ECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCC
Confidence 9999975443 89999999988888777654
No 328
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.19 E-value=5.6e-11 Score=129.35 Aligned_cols=98 Identities=10% Similarity=-0.043 Sum_probs=84.2
Q ss_pred CCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCeEEEEEecCCCCEEEEEeCCCcEEEEEC
Q 004987 608 NLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGVVQVGQV 686 (720)
Q Consensus 608 ~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~~~~~~~~~laS~s~D~~v~lWD~ 686 (720)
.++....|+|||++||+|+.|++|+|||+.+. .++..+ .|...|.+++|+|+ +.+||||+.|++|+|||+
T Consensus 98 ~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~--------~~~~~~~~h~~~v~~~~~~~~-~~~l~s~s~d~~i~iwd~ 168 (420)
T 3vl1_A 98 DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFN--------LQREIDQAHVSEITKLKFFPS-GEALISSSQDMQLKIWSV 168 (420)
T ss_dssp CEEEEEEECSSSCEEEEEETTSCEEEECTTSC--------EEEEETTSSSSCEEEEEECTT-SSEEEEEETTSEEEEEET
T ss_pred CceEEEEEecCCCEEEEEECCCCEEEEeCCCc--------ceeeecccccCccEEEEECCC-CCEEEEEeCCCeEEEEeC
Confidence 66777789999999999999999999998765 233343 45778999999995 569999999999999999
Q ss_pred CCCcEEEE-------EEEEeecCCceEEEecCccc
Q 004987 687 LHLIYFSA-------LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 687 ~tg~~~~~-------~~~v~~~~~~~~~~~~~~~~ 714 (720)
.+++++.+ |++++|++....+.+++.|.
T Consensus 169 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~ 203 (420)
T 3vl1_A 169 KDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDG 203 (420)
T ss_dssp TTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTS
T ss_pred CCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCC
Confidence 99988776 89999999998888888776
No 329
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.18 E-value=1.2e-10 Score=145.30 Aligned_cols=102 Identities=16% Similarity=0.276 Sum_probs=86.2
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCeEEEEEecCCCCEEEEEeCCCcE
Q 004987 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~l~~~~~~~~~laS~s~D~~v 681 (720)
+.+|.+.|.+++|+|||++|||||.|++|+|||+.+. .++..+. |...|.+++|+|+ +.+||||+.||+|
T Consensus 611 ~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~--------~~~~~~~~h~~~v~~~~~s~~-~~~l~s~~~d~~v 681 (1249)
T 3sfz_A 611 VRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETG--------EKLLDIKAHEDEVLCCAFSSD-DSYIATCSADKKV 681 (1249)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC--------CEEEEECCCSSCEEEEEECTT-SSEEEEEETTSEE
T ss_pred EecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCC--------CEEEEeccCCCCEEEEEEecC-CCEEEEEeCCCeE
Confidence 4578999999999999999999999999999998876 2344443 4778999999995 5799999999999
Q ss_pred EEEECCCCcEEEE-------EEEEeecC--CceEEEecCcc
Q 004987 682 QVGQVLHLIYFSA-------LYCIVLNK--LLIIFRYGMFQ 713 (720)
Q Consensus 682 ~lWD~~tg~~~~~-------~~~v~~~~--~~~~~~~~~~~ 713 (720)
+|||+.+|+++.+ |+|++|++ ....+.+|+-|
T Consensus 682 ~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d 722 (1249)
T 3sfz_A 682 KIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSND 722 (1249)
T ss_dssp EEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETT
T ss_pred EEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCC
Confidence 9999999999887 89999998 44455566554
No 330
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.18 E-value=8.3e-11 Score=129.11 Aligned_cols=105 Identities=17% Similarity=0.127 Sum_probs=79.6
Q ss_pred ceEEeeeeccCCCCCCCCCeEEEEECC-CCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCeEEEEEecCCC
Q 004987 591 KLRVKADLNQGDLLNSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIK 669 (720)
Q Consensus 591 ~~~~~~~l~~~~~~~~~~~V~sv~f~~-dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~ 669 (720)
+.++++.+. .+|.+.|.+|+|+| ||++|||||.|++|+|||+.+..... ...+...+.|...|.+|+|+| ++
T Consensus 51 ~g~~~~~~~----~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~--~~~~~~~~~h~~~v~~~~~~~-~~ 123 (437)
T 3gre_A 51 RGKLIATLM----ENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGE--VYSSSLTYDCSSTVTQITMIP-NF 123 (437)
T ss_dssp CCCEEEEEC----TTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTC--CCSCSEEEECSSCEEEEEECT-TS
T ss_pred cceEEeeec----cCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCc--ccceeeeccCCCCEEEEEEeC-CC
Confidence 345666662 34789999999999 99999999999999999986621111 112344556788999999999 56
Q ss_pred CEEEEEeCCCcEEEEECC---CCcEEEE-----EEEEeecC
Q 004987 670 SQIASSNFEGVVQVGQVL---HLIYFSA-----LYCIVLNK 702 (720)
Q Consensus 670 ~~laS~s~D~~v~lWD~~---tg~~~~~-----~~~v~~~~ 702 (720)
++||||+.||+|+|||+. +|+++.. +.++.|++
T Consensus 124 ~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~ 164 (437)
T 3gre_A 124 DAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKN 164 (437)
T ss_dssp SEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGG
T ss_pred CEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccC
Confidence 799999999999999994 7776653 55566554
No 331
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.18 E-value=1.2e-10 Score=127.71 Aligned_cols=112 Identities=9% Similarity=0.054 Sum_probs=85.1
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccc-cceEEecCCCCeEEEEEecCCCCEEEEEeCCCcE
Q 004987 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIH-YPVVEMASRSKLSSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~i~~l~~~~~~~~~laS~s~D~~v 681 (720)
+.+|...|.+++|+|||++|||| .|++|+|||+.+......... .|.....|...|.+++|+|++.++||+|+.||+|
T Consensus 173 ~~~h~~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i 251 (447)
T 3dw8_B 173 ANAHTYHINSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTI 251 (447)
T ss_dssp CSCCSSCCCEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCE
T ss_pred ccCCCcceEEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeE
Confidence 35789999999999999999998 799999999874311000000 0001124577899999999765899999999999
Q ss_pred EEEECCCCcE----EE-------------------EEEEEeecCCceEEEecCccce
Q 004987 682 QVGQVLHLIY----FS-------------------ALYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 682 ~lWD~~tg~~----~~-------------------~~~~v~~~~~~~~~~~~~~~~~ 715 (720)
+|||+++++. +. .|++++|++....+..++...|
T Consensus 252 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~~~v 308 (447)
T 3dw8_B 252 RLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDYLSV 308 (447)
T ss_dssp EEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEESSEE
T ss_pred EEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeCCeE
Confidence 9999999885 22 4789999999888877765433
No 332
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.17 E-value=7e-11 Score=140.24 Aligned_cols=107 Identities=13% Similarity=0.148 Sum_probs=85.5
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCeEEEEEecCC-CCEEEEEeCCCc
Q 004987 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYI-KSQIASSNFEGV 680 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~~~~~~-~~~laS~s~D~~ 680 (720)
+.+|.+.|++++|+|||++|||||.|++|+|||+..... .++..+ .|.+.|.+++|+|+. +++||||+.||+
T Consensus 5 l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~------~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~ 78 (753)
T 3jro_A 5 ANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETH------KLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGK 78 (753)
T ss_dssp ---CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEE------EEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSC
T ss_pred cccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCC------ccceeccCCcCceEEEEecCCCCCCEEEEEeCCCe
Confidence 567899999999999999999999999999999763211 233344 357789999999852 679999999999
Q ss_pred EEEEECCCCc--EEEE-------EEEEeecCC--ceEEEecCccce
Q 004987 681 VQVGQVLHLI--YFSA-------LYCIVLNKL--LIIFRYGMFQEV 715 (720)
Q Consensus 681 v~lWD~~tg~--~~~~-------~~~v~~~~~--~~~~~~~~~~~~ 715 (720)
|+|||+.+++ .+.. |+|++|++. ...+.+|+.|..
T Consensus 79 I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~ 124 (753)
T 3jro_A 79 VLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGK 124 (753)
T ss_dssp EEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSE
T ss_pred EEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCc
Confidence 9999999997 4443 899999998 777777777643
No 333
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.17 E-value=1.7e-11 Score=133.68 Aligned_cols=108 Identities=7% Similarity=-0.139 Sum_probs=76.8
Q ss_pred CCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCeEEEEEecC-------CCCEEEEEe
Q 004987 605 NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSY-------IKSQIASSN 676 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~~~~~-------~~~~laS~s 676 (720)
+|...+....+++++.+|||||.|++|||||.++.... ...++..+ .|.+.|.+|+|+|. ++++|||||
T Consensus 87 ~~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~---~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s 163 (393)
T 4gq1_A 87 LHDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETII---TQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVG 163 (393)
T ss_dssp ----------CCEEEEEEEEEETTSCEEEEEEETTEEE---EEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEE
T ss_pred ccCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccc---eeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEE
Confidence 45666777778889999999999999999998765110 00122223 34778999999972 457999999
Q ss_pred CCCcEEEEECCCCcEEEE-------EEEEeecCCc-eEEEecCccce
Q 004987 677 FEGVVQVGQVLHLIYFSA-------LYCIVLNKLL-IIFRYGMFQEV 715 (720)
Q Consensus 677 ~D~~v~lWD~~tg~~~~~-------~~~v~~~~~~-~~~~~~~~~~~ 715 (720)
.|+||||||++++.++.. +.+|+|+|.. ..+.+|+.|..
T Consensus 164 ~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~ 210 (393)
T 4gq1_A 164 DDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGN 210 (393)
T ss_dssp TTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSE
T ss_pred CCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCE
Confidence 999999999999887765 8999999976 47888887764
No 334
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.17 E-value=7e-11 Score=125.19 Aligned_cols=99 Identities=11% Similarity=0.202 Sum_probs=80.3
Q ss_pred hhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECC-CCCEEEEeeCCCcEEEeeCCcccccccccccceEEe----c
Q 004987 580 LEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM----A 654 (720)
Q Consensus 580 ~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~-dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~----~ 654 (720)
.++..++|...+.+.+..++ +|...|.+++|+| ++.+||+|+.|++|+|||+.+. .++..+ .
T Consensus 93 ~dg~i~v~d~~~~~~~~~~~-----~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~--------~~~~~~~~~~~ 159 (366)
T 3k26_A 93 SRGIIRIINPITMQCIKHYV-----GHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTD--------TLVAIFGGVEG 159 (366)
T ss_dssp TTCEEEEECTTTCCEEEEEE-----SCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTT--------EEEEEECSTTS
T ss_pred CCCEEEEEEchhceEeeeec-----CCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecC--------eEEEEeccccc
Confidence 34456677777777777665 4589999999999 9999999999999999998765 233333 3
Q ss_pred CCCCeEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEE
Q 004987 655 SRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYF 692 (720)
Q Consensus 655 ~~~~i~~l~~~~~~~~~laS~s~D~~v~lWD~~tg~~~ 692 (720)
+...|.+++|+| ++++|++++.||+|++||+++++.+
T Consensus 160 ~~~~v~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~ 196 (366)
T 3k26_A 160 HRDEVLSADYDL-LGEKIMSCGMDHSLKLWRINSKRMM 196 (366)
T ss_dssp CSSCEEEEEECT-TSSEEEEEETTSCEEEEESCSHHHH
T ss_pred ccCceeEEEECC-CCCEEEEecCCCCEEEEECCCCccc
Confidence 577899999999 4679999999999999999988654
No 335
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.17 E-value=9.8e-11 Score=129.13 Aligned_cols=110 Identities=14% Similarity=0.151 Sum_probs=86.0
Q ss_pred CCCCCCeEEEEECCCCC-EEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCeEEEEEecCCCCEEEEEeCCCcE
Q 004987 604 LNSSNLVCSLSFDRDGE-LFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 604 ~~~~~~V~sv~f~~dg~-~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~~~~~~~~~laS~s~D~~v 681 (720)
.+|...|++|+|+|++. +||||+.|++|+|||+.+........ .+...+ .|...|.+++|+|.++.+|||++.||+|
T Consensus 178 ~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~-~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i 256 (430)
T 2xyi_A 178 RGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVI-DAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKL 256 (430)
T ss_dssp ECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEE-ECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEE
T ss_pred cCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCcee-ccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeE
Confidence 45688999999999999 99999999999999998742111111 122333 4577899999999888899999999999
Q ss_pred EEEECCCC---cEEEE-------EEEEeecCCce-EEEecCccc
Q 004987 682 QVGQVLHL---IYFSA-------LYCIVLNKLLI-IFRYGMFQE 714 (720)
Q Consensus 682 ~lWD~~tg---~~~~~-------~~~v~~~~~~~-~~~~~~~~~ 714 (720)
++||++++ +.+.. |+|++|++... .+..|+.|.
T Consensus 257 ~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg 300 (430)
T 2xyi_A 257 MIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADK 300 (430)
T ss_dssp EEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTS
T ss_pred EEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCC
Confidence 99999987 44443 89999999775 566776654
No 336
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.16 E-value=1.3e-10 Score=122.26 Aligned_cols=106 Identities=8% Similarity=0.046 Sum_probs=85.4
Q ss_pred CCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCeEEEEEecCCCC-EEEEEeCCCcEE
Q 004987 604 LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKS-QIASSNFEGVVQ 682 (720)
Q Consensus 604 ~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~-~laS~s~D~~v~ 682 (720)
.+|.+.|.+++|+|||++||+|+.|++|+|||+.+.... ..+.....+...|.+++|+|+ ++ +|++|+.||+|+
T Consensus 8 ~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~----~~~~~~~~~~~~v~~~~~~~~-~~~~l~~~~~dg~i~ 82 (342)
T 1yfq_A 8 QAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKN----VDLLQSLRYKHPLLCCNFIDN-TDLQIYVGTVQGEIL 82 (342)
T ss_dssp SCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTE----EEEEEEEECSSCEEEEEEEES-SSEEEEEEETTSCEE
T ss_pred cCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCcc----ccceeeeecCCceEEEEECCC-CCcEEEEEcCCCeEE
Confidence 367999999999999999999999999999998765210 012233456788999999995 68 999999999999
Q ss_pred EEEC-CCCcEEE--------EEEEEeecCCceEEEecCccce
Q 004987 683 VGQV-LHLIYFS--------ALYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 683 lWD~-~tg~~~~--------~~~~v~~~~~~~~~~~~~~~~~ 715 (720)
+||+ .+++... .|++++|++ ...+.+++.|..
T Consensus 83 ~wd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~ 123 (342)
T 1yfq_A 83 KVDLIGSPSFQALTNNEANLGICRICKYG-DDKLIAASWDGL 123 (342)
T ss_dssp EECSSSSSSEEECBSCCCCSCEEEEEEET-TTEEEEEETTSE
T ss_pred EEEeccCCceEeccccCCCCceEEEEeCC-CCEEEEEcCCCe
Confidence 9999 8876532 178999999 888888777754
No 337
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.16 E-value=3.4e-10 Score=118.40 Aligned_cols=119 Identities=9% Similarity=0.001 Sum_probs=96.6
Q ss_pred hhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCeE
Q 004987 581 EGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLS 660 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~ 660 (720)
++..+++...+.+.+..+.+ ...|.+++|+|+|++||+|+.|++|++||+.+.. ......+...|.
T Consensus 204 dg~i~~~d~~~~~~~~~~~~------~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~--------~~~~~~~~~~v~ 269 (337)
T 1gxr_A 204 DNTVRSWDLREGRQLQQHDF------TSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPD--------KYQLHLHESCVL 269 (337)
T ss_dssp TSEEEEEETTTTEEEEEEEC------SSCEEEEEECTTSSEEEEEETTSCEEEEETTSSC--------EEEECCCSSCEE
T ss_pred CCcEEEEECCCCceEeeecC------CCceEEEEECCCCCEEEEEcCCCcEEEEECCCCC--------eEEEcCCcccee
Confidence 33456666666677666654 6789999999999999999999999999987652 222334577899
Q ss_pred EEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE------EEEEeecCCceEEEecCccc
Q 004987 661 SICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA------LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 661 ~l~~~~~~~~~laS~s~D~~v~lWD~~tg~~~~~------~~~v~~~~~~~~~~~~~~~~ 714 (720)
+++|+|+ +.+|++++.||+|++||+.+++.+.. +++++|++....+..++-|.
T Consensus 270 ~~~~~~~-~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg 328 (337)
T 1gxr_A 270 SLKFAYC-GKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVTGSGDK 328 (337)
T ss_dssp EEEECTT-SSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEETTS
T ss_pred EEEECCC-CCEEEEecCCCcEEEEECCCCeEEEEecCCCcEEEEEECCCCCEEEEecCCC
Confidence 9999995 56999999999999999999998865 89999999988888777664
No 338
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.16 E-value=2.3e-10 Score=121.71 Aligned_cols=125 Identities=14% Similarity=0.078 Sum_probs=94.2
Q ss_pred hhhhhhccccceE--EeeeeccCCCCCCCCCeEEEEECCC--CCEEEEeeCCCcEEEeeCCcccccccccccceEEecCC
Q 004987 581 EGLCKYLSFSKLR--VKADLNQGDLLNSSNLVCSLSFDRD--GELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASR 656 (720)
Q Consensus 581 ~~l~~~~~~~~~~--~~~~l~~~~~~~~~~~V~sv~f~~d--g~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~ 656 (720)
++..++|...+.+ .+..+ .+|...|.+++|+|+ |.+||+|+.|++|+|||+..... ........+.
T Consensus 78 dg~v~iwd~~~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~-----~~~~~~~~~~ 147 (379)
T 3jrp_A 78 DGKVLIWKEENGRWSQIAVH-----AVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGT-----TSPIIIDAHA 147 (379)
T ss_dssp TSCEEEEEEETTEEEEEEEE-----CCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSC-----CCEEEEECCT
T ss_pred CCEEEEEEcCCCceeEeeee-----cCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCc-----eeeEEecCCC
Confidence 3445555554443 33333 346889999999999 99999999999999999876521 1122233457
Q ss_pred CCeEEEEEecC------------CCCEEEEEeCCCcEEEEECCCCcEE----EE-------EEEEeecCC---ceEEEec
Q 004987 657 SKLSSICWNSY------------IKSQIASSNFEGVVQVGQVLHLIYF----SA-------LYCIVLNKL---LIIFRYG 710 (720)
Q Consensus 657 ~~i~~l~~~~~------------~~~~laS~s~D~~v~lWD~~tg~~~----~~-------~~~v~~~~~---~~~~~~~ 710 (720)
..|.+++|+|. ++.+||+|+.||+|+|||+++++.. .+ |++++|++. ...+.++
T Consensus 148 ~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~ 227 (379)
T 3jrp_A 148 IGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASV 227 (379)
T ss_dssp TCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEE
T ss_pred CceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEE
Confidence 78999999995 4679999999999999999887532 22 889999999 7888888
Q ss_pred Cccce
Q 004987 711 MFQEV 715 (720)
Q Consensus 711 ~~~~~ 715 (720)
+.|..
T Consensus 228 ~~dg~ 232 (379)
T 3jrp_A 228 SQDRT 232 (379)
T ss_dssp ETTSC
T ss_pred eCCCE
Confidence 77753
No 339
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.16 E-value=1.3e-10 Score=123.12 Aligned_cols=92 Identities=12% Similarity=0.188 Sum_probs=76.3
Q ss_pred CCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCeEEEEE--ecCCCCEEEEEeCCCcE
Q 004987 604 LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICW--NSYIKSQIASSNFEGVV 681 (720)
Q Consensus 604 ~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~--~~~~~~~laS~s~D~~v 681 (720)
.+|.+.|.+++|+|||++||||+.|++|+|||+.+. ..+....+...|.+++| +| ++.+|++++.||+|
T Consensus 83 ~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~--------~~~~~~~~~~~v~~~~~~~~~-~~~~l~~~~~dg~i 153 (368)
T 3mmy_A 83 QMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSN--------QAIQIAQHDAPVKTIHWIKAP-NYSCVMTGSWDKTL 153 (368)
T ss_dssp EECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT--------EEEEEEECSSCEEEEEEEECS-SCEEEEEEETTSEE
T ss_pred ccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCC--------CceeeccccCceEEEEEEeCC-CCCEEEEccCCCcE
Confidence 346899999999999999999999999999998876 23444567888999999 76 45689999999999
Q ss_pred EEEECCCCcEEEE------EEEEeecCCc
Q 004987 682 QVGQVLHLIYFSA------LYCIVLNKLL 704 (720)
Q Consensus 682 ~lWD~~tg~~~~~------~~~v~~~~~~ 704 (720)
+|||+++++++.. +.++.+....
T Consensus 154 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (368)
T 3mmy_A 154 KFWDTRSSNPMMVLQLPERCYCADVIYPM 182 (368)
T ss_dssp EEECSSCSSCSEEEECSSCEEEEEEETTE
T ss_pred EEEECCCCcEEEEEecCCCceEEEecCCe
Confidence 9999999998876 4555555443
No 340
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.16 E-value=2.6e-10 Score=125.11 Aligned_cols=121 Identities=12% Similarity=0.169 Sum_probs=96.4
Q ss_pred hhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCe
Q 004987 581 EGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKL 659 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i 659 (720)
++-.+.|...+.+++..+. +.+|...|+||+|+|||++||||+.|++|+|||+.+. .++..+. |...|
T Consensus 124 d~tV~lWd~~tg~~~~~~~---~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~--------~~~~~~~~h~~~v 192 (420)
T 4gga_A 124 DNSVYLWSASSGDILQLLQ---MEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQ--------KRLRNMTSHSARV 192 (420)
T ss_dssp TTEEEEEETTTCCEEEEEE---CCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTT--------EEEEEECCCSSCE
T ss_pred CCEEEEEECCCCCEEEEEE---ecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCC--------cEEEEEeCCCCce
Confidence 4556777777777666664 3467889999999999999999999999999998876 2344443 46779
Q ss_pred EEEEEecCCCCEEEEEeCCCcEEEEECCCCcEE-EE-------EEEEeecCCceEEEecCccce
Q 004987 660 SSICWNSYIKSQIASSNFEGVVQVGQVLHLIYF-SA-------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 660 ~~l~~~~~~~~~laS~s~D~~v~lWD~~tg~~~-~~-------~~~v~~~~~~~~~~~~~~~~~ 715 (720)
.+++|++ .+|+||+.|++|++||+.+.... .+ +.++.|++....+.++.-|..
T Consensus 193 ~~~s~~~---~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~ 253 (420)
T 4gga_A 193 GSLSWNS---YILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNL 253 (420)
T ss_dssp EEEEEET---TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred EEEeeCC---CEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeecccc
Confidence 9999986 58999999999999999876543 32 788899998888888776654
No 341
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.15 E-value=1.7e-10 Score=120.39 Aligned_cols=112 Identities=16% Similarity=0.200 Sum_probs=86.2
Q ss_pred CCCCCCeEEEEECCC--CCEEEEeeCCCcEEEeeCCccccccc-------------------------------------
Q 004987 604 LNSSNLVCSLSFDRD--GELFAAAGVNKKIKVFECDAIINENR------------------------------------- 644 (720)
Q Consensus 604 ~~~~~~V~sv~f~~d--g~~lat~~~d~~i~iwd~~~~~~~~~------------------------------------- 644 (720)
.+|...|.+++|+|+ +.+||+|+.|++|+|||+++......
T Consensus 107 ~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~ 186 (351)
T 3f3f_A 107 NDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLA 186 (351)
T ss_dssp CCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEE
T ss_pred cccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEE
Confidence 356899999999999 99999999999999999875411000
Q ss_pred --------------ccc-cceEEec-CCCCeEEEEEecCCC---CEEEEEeCCCcEEEEECCCC----------------
Q 004987 645 --------------DIH-YPVVEMA-SRSKLSSICWNSYIK---SQIASSNFEGVVQVGQVLHL---------------- 689 (720)
Q Consensus 645 --------------~~~-~~~~~~~-~~~~i~~l~~~~~~~---~~laS~s~D~~v~lWD~~tg---------------- 689 (720)
... .++..+. |...|.+++|+|++. ++||||+.||+|+|||++++
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 266 (351)
T 3f3f_A 187 VSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMF 266 (351)
T ss_dssp EEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC---------------
T ss_pred EecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceecc
Confidence 000 0133333 467899999999653 69999999999999999886
Q ss_pred ------------------------------cEEEE-------EEEEeecCCceEEEecCccce
Q 004987 690 ------------------------------IYFSA-------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 690 ------------------------------~~~~~-------~~~v~~~~~~~~~~~~~~~~~ 715 (720)
+.+.+ |++++|++....+.+++.|..
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~ 329 (351)
T 3f3f_A 267 DNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGK 329 (351)
T ss_dssp ------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETTSC
T ss_pred CCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEEEEecCCCc
Confidence 44443 899999999988888887763
No 342
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.15 E-value=2.5e-10 Score=122.95 Aligned_cols=123 Identities=17% Similarity=0.184 Sum_probs=94.0
Q ss_pred hhhhhccccceEEeeeeccCCCCCC---CCCeEEEEECCCCCEEEEeeCC---CcEEEeeCCcccccccccccceEEec-
Q 004987 582 GLCKYLSFSKLRVKADLNQGDLLNS---SNLVCSLSFDRDGELFAAAGVN---KKIKVFECDAIINENRDIHYPVVEMA- 654 (720)
Q Consensus 582 ~l~~~~~~~~~~~~~~l~~~~~~~~---~~~V~sv~f~~dg~~lat~~~d---~~i~iwd~~~~~~~~~~~~~~~~~~~- 654 (720)
+..+++...+.+++..++. ..+| ...|.+++|+|+|.+||+|+.| ++|+|||+.+. .++..+.
T Consensus 207 g~i~i~d~~~~~~~~~~~~--~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~--------~~~~~~~~ 276 (397)
T 1sq9_A 207 GTVQISELSTLRPLYNFES--QHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFG--------ERIGSLSV 276 (397)
T ss_dssp SEEEEEETTTTEEEEEEEC--CC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTC--------CEEEEECB
T ss_pred CcEEEEECCCCceeEEEec--cccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCC--------cccceecc
Confidence 3445555555566655542 1236 7899999999999999999999 99999998765 2333332
Q ss_pred -------------CCCCeEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE---------------------------
Q 004987 655 -------------SRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA--------------------------- 694 (720)
Q Consensus 655 -------------~~~~i~~l~~~~~~~~~laS~s~D~~v~lWD~~tg~~~~~--------------------------- 694 (720)
+...|.+++|+|+ +.+||+++.||+|+|||+.+++++.+
T Consensus 277 ~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 355 (397)
T 1sq9_A 277 PTHSSQASLGEFAHSSWVMSLSFNDS-GETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEP 355 (397)
T ss_dssp C--------CCBSBSSCEEEEEECSS-SSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSC
T ss_pred CcccccccccccccCCcEEEEEECCC-CCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCC
Confidence 5778999999995 57999999999999999999987654
Q ss_pred -EEEEeecCCc----------eEEEecCccce
Q 004987 695 -LYCIVLNKLL----------IIFRYGMFQEV 715 (720)
Q Consensus 695 -~~~v~~~~~~----------~~~~~~~~~~~ 715 (720)
|++++|++.. ..+.+++.|..
T Consensus 356 ~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~ 387 (397)
T 1sq9_A 356 GVFDVKFLKKGWRSGMGADLNESLCCVCLDRS 387 (397)
T ss_dssp CEEEEEEECTTTSBSTTCTTSCEEEEEETTTE
T ss_pred ceeEEEeccccccccccccccceEEEecCCCc
Confidence 4588999987 57777776654
No 343
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.15 E-value=4.7e-10 Score=117.28 Aligned_cols=118 Identities=8% Similarity=0.048 Sum_probs=96.7
Q ss_pred hhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCeEEE
Q 004987 583 LCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSI 662 (720)
Q Consensus 583 l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l 662 (720)
..+++...+.+++..++ +|...|.+++|+|+|++|++|+.|++|++||+++. .++..+.+...|.++
T Consensus 164 ~v~~~d~~~~~~~~~~~-----~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~--------~~~~~~~~~~~v~~~ 230 (337)
T 1gxr_A 164 NIAVWDLHNQTLVRQFQ-----GHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREG--------RQLQQHDFTSQIFSL 230 (337)
T ss_dssp CEEEEETTTTEEEEEEC-----CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT--------EEEEEEECSSCEEEE
T ss_pred cEEEEeCCCCceeeeee-----cccCceEEEEECCCCCEEEEEecCCcEEEEECCCC--------ceEeeecCCCceEEE
Confidence 44555556666666664 35789999999999999999999999999998776 244455667789999
Q ss_pred EEecCCCCEEEEEeCCCcEEEEECCCCcEEEE------EEEEeecCCceEEEecCccc
Q 004987 663 CWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA------LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 663 ~~~~~~~~~laS~s~D~~v~lWD~~tg~~~~~------~~~v~~~~~~~~~~~~~~~~ 714 (720)
+|+|+ +.+|++++.|+.|++||+.+++.... +.+++|++....+..++.|.
T Consensus 231 ~~s~~-~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg 287 (337)
T 1gxr_A 231 GYCPT-GEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDN 287 (337)
T ss_dssp EECTT-SSEEEEEETTSCEEEEETTSSCEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred EECCC-CCEEEEEcCCCcEEEEECCCCCeEEEcCCccceeEEEECCCCCEEEEecCCC
Confidence 99995 57999999999999999999887654 89999999888888777664
No 344
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.15 E-value=1.6e-10 Score=126.84 Aligned_cols=104 Identities=6% Similarity=0.029 Sum_probs=82.2
Q ss_pred hhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe--cCCCC
Q 004987 581 EGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM--ASRSK 658 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~--~~~~~ 658 (720)
++..++|...+.+.+..+.. ..|...|.+++|+|+|.+||||+.|++|+|||+++. .++..+ .++..
T Consensus 191 d~~i~iwd~~~~~~~~~~~~---~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~--------~~~~~~~~~~~~~ 259 (437)
T 3gre_A 191 LSRVIIFDIRTLERLQIIEN---SPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFN--------VLIRSWSFGDHAP 259 (437)
T ss_dssp TSEEEEEETTTCCEEEEEEC---CGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTT--------EEEEEEBCTTCEE
T ss_pred CCeEEEEeCCCCeeeEEEcc---CCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCc--------cEEEEEecCCCCc
Confidence 34556666666666666652 015789999999999999999999999999998875 244443 45668
Q ss_pred eEEEEEecC---CCCEEEEEeCCCcEEEEECCCCcEEEEE
Q 004987 659 LSSICWNSY---IKSQIASSNFEGVVQVGQVLHLIYFSAL 695 (720)
Q Consensus 659 i~~l~~~~~---~~~~laS~s~D~~v~lWD~~tg~~~~~~ 695 (720)
|.+++|+|. ++.+||+|+.||+|+|||+++++++.++
T Consensus 260 v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 299 (437)
T 3gre_A 260 ITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAF 299 (437)
T ss_dssp EEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEE
T ss_pred eEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEE
Confidence 999988873 3559999999999999999999988764
No 345
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.15 E-value=2.4e-10 Score=142.51 Aligned_cols=121 Identities=8% Similarity=0.041 Sum_probs=100.0
Q ss_pred hhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCe
Q 004987 581 EGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKL 659 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i 659 (720)
++..+.|...+.+.+.+++ +|.+.|.+++|+|||++|||||.|++|+|||+.++ .++..+ .|...|
T Consensus 636 d~~i~vw~~~~~~~~~~~~-----~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~--------~~~~~~~~~~~~v 702 (1249)
T 3sfz_A 636 DKTLQVFKAETGEKLLDIK-----AHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATG--------KLVHTYDEHSEQV 702 (1249)
T ss_dssp TSCEEEEETTTCCEEEEEC-----CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC--------CEEEEEECCSSCE
T ss_pred CCeEEEEECCCCCEEEEec-----cCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCC--------ceEEEEcCCCCcE
Confidence 4455666666666666654 56899999999999999999999999999998876 234444 457789
Q ss_pred EEEEEecC-CCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccc
Q 004987 660 SSICWNSY-IKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 660 ~~l~~~~~-~~~~laS~s~D~~v~lWD~~tg~~~~~-------~~~v~~~~~~~~~~~~~~~~ 714 (720)
.+++|+|+ ...+|+||+.|++|+|||+.+++++.+ |++++|++....+.+++-|.
T Consensus 703 ~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg 765 (1249)
T 3sfz_A 703 NCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADG 765 (1249)
T ss_dssp EEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSS
T ss_pred EEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCC
Confidence 99999995 345899999999999999999999886 89999999998888887764
No 346
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.14 E-value=2.8e-10 Score=125.47 Aligned_cols=106 Identities=10% Similarity=0.212 Sum_probs=84.5
Q ss_pred CCCCCCCeEEEEECC-CCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCeEEEEEecCCCCEEEEEeCCCc
Q 004987 603 LLNSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGV 680 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~-dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~~~~~~~~~laS~s~D~~ 680 (720)
+.+|...|.+|+|+| ++.+||+|+.|++|+|||+++... ..++..+ .+...|++|+|+|++..+||+|+.||+
T Consensus 227 ~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~-----~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~ 301 (430)
T 2xyi_A 227 FTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNT-----SKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKT 301 (430)
T ss_dssp ECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCS-----SSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSE
T ss_pred ecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCC-----CcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCe
Confidence 456789999999999 678999999999999999986510 1234344 457789999999987779999999999
Q ss_pred EEEEECCC-CcEEEE-------EEEEeecCCc-eEEEecCcc
Q 004987 681 VQVGQVLH-LIYFSA-------LYCIVLNKLL-IIFRYGMFQ 713 (720)
Q Consensus 681 v~lWD~~t-g~~~~~-------~~~v~~~~~~-~~~~~~~~~ 713 (720)
|+|||+++ ++++.+ |+++.|++.. ..+.+++.|
T Consensus 302 v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d 343 (430)
T 2xyi_A 302 VALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTD 343 (430)
T ss_dssp EEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETT
T ss_pred EEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCC
Confidence 99999998 455554 8999999977 346665544
No 347
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.14 E-value=1.8e-10 Score=129.90 Aligned_cols=103 Identities=8% Similarity=0.008 Sum_probs=76.2
Q ss_pred CCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccc-cccccccceEEe-----cCCCCeEEEEEecCCCCEEEEEeCCCcE
Q 004987 608 NLVCSLSFDRDGELFAAAGVNKKIKVFECDAIIN-ENRDIHYPVVEM-----ASRSKLSSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 608 ~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~-~~~~~~~~~~~~-----~~~~~i~~l~~~~~~~~~laS~s~D~~v 681 (720)
..|.+++|||||++||+||.|++|+|||+....- ...- ..+.++ +|.++|.+|+|+|++ ||+++.|++|
T Consensus 130 ~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~--i~l~ti~~~~~gh~~~V~sVawSPdg---Laass~D~tV 204 (588)
T 2j04_A 130 RTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEF--YFESSIRLSDAGSKDWVTHIVWYEDV---LVAALSNNSV 204 (588)
T ss_dssp TCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCC--EEEEEEECSCTTCCCCEEEEEEETTE---EEEEETTCCE
T ss_pred ccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccc--eeeeeeecccccccccEEEEEEcCCc---EEEEeCCCeE
Confidence 3599999999999999999999999999876520 0000 012332 235689999999954 8888889999
Q ss_pred EEEECCCCcE------EE-----EEEEEeecCCceEEEecCccceEE
Q 004987 682 QVGQVLHLIY------FS-----ALYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 682 ~lWD~~tg~~------~~-----~~~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
++||+.+++. +. .|++|+|+ ...+.+++-.+|+.
T Consensus 205 rlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~~~tIkL 249 (588)
T 2j04_A 205 FSMTVSASSHQPVSRMIQNASRRKITDLKIV--DYKVVLTCPGYVHK 249 (588)
T ss_dssp EEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEECSSEEEE
T ss_pred EEEECCCCccccceeeecccccCcEEEEEEE--CCEEEEEeCCeEEE
Confidence 9999988873 32 18999998 35556555456654
No 348
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.13 E-value=1.3e-10 Score=122.82 Aligned_cols=125 Identities=16% Similarity=0.169 Sum_probs=92.2
Q ss_pred hhhhccccceEEeeeeccCCCCCCCCCeEEEEECC---CCCEEEEeeCCCcEEEeeCCcccccccccccceEE-ecCCCC
Q 004987 583 LCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDR---DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVE-MASRSK 658 (720)
Q Consensus 583 l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~---dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~ 658 (720)
..+++...+.+.+.... |...|.+++|+| ++.+||+|+.|++|+|||+++..... ..+... ..+...
T Consensus 191 ~i~i~d~~~~~~~~~~~------~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~---~~~~~~~~~~~~~ 261 (357)
T 3i2n_A 191 DIKLFDLRNMALRWETN------IKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTK---GFASVSEKAHKST 261 (357)
T ss_dssp EEEEEETTTTEEEEEEE------CSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTT---EEEEEEEECCSSC
T ss_pred eEEEEECccCceeeecC------CCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCccc---ceeeeccCCCcCC
Confidence 44555555555544433 378899999999 99999999999999999987652110 011111 245778
Q ss_pred eEEEEEecCCCCEEEEEeCCCcEEEEECCCCc-------------------EEEE-------EEEEeecCCceEEE-ecC
Q 004987 659 LSSICWNSYIKSQIASSNFEGVVQVGQVLHLI-------------------YFSA-------LYCIVLNKLLIIFR-YGM 711 (720)
Q Consensus 659 i~~l~~~~~~~~~laS~s~D~~v~lWD~~tg~-------------------~~~~-------~~~v~~~~~~~~~~-~~~ 711 (720)
|.+++|+|++..+||+|+.||+|+|||++++. ++.+ |++++|++....+. +++
T Consensus 262 v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~ 341 (357)
T 3i2n_A 262 VWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSS 341 (357)
T ss_dssp EEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEE
T ss_pred EEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEec
Confidence 99999999765589999999999999998653 3333 89999999988887 787
Q ss_pred ccceE
Q 004987 712 FQEVK 716 (720)
Q Consensus 712 ~~~~~ 716 (720)
.|..-
T Consensus 342 ~d~~i 346 (357)
T 3i2n_A 342 FDQTV 346 (357)
T ss_dssp TTSEE
T ss_pred CCCcE
Confidence 77543
No 349
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.12 E-value=3e-10 Score=124.46 Aligned_cols=131 Identities=8% Similarity=0.034 Sum_probs=97.5
Q ss_pred hhhhhhcccc-ceEEeeee--ccCCCCCCCCCeEEEEECCCC-CEEEEeeCCCcEEEeeCCcccccccccccceEEecCC
Q 004987 581 EGLCKYLSFS-KLRVKADL--NQGDLLNSSNLVCSLSFDRDG-ELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASR 656 (720)
Q Consensus 581 ~~l~~~~~~~-~~~~~~~l--~~~~~~~~~~~V~sv~f~~dg-~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~ 656 (720)
++..++|... .-+.+..+ +...+.+|...|.+++|+|+| .+||+|+.|++|+|||+++.... ..++..+.++
T Consensus 197 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~----~~~~~~~~~~ 272 (447)
T 3dw8_B 197 DLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALC----DRHSKLFEEP 272 (447)
T ss_dssp SSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSS----CTTCEEECCC
T ss_pred CCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccc----cceeeEeccC
Confidence 4456666665 33344433 233567889999999999999 99999999999999998875210 0123344332
Q ss_pred -------------CCeEEEEEecCCCCEEEEEeCCCcEEEEECCC-CcEEEEEE----------------------EEee
Q 004987 657 -------------SKLSSICWNSYIKSQIASSNFEGVVQVGQVLH-LIYFSALY----------------------CIVL 700 (720)
Q Consensus 657 -------------~~i~~l~~~~~~~~~laS~s~D~~v~lWD~~t-g~~~~~~~----------------------~v~~ 700 (720)
+.|.+++|+| ++.+||+++. ++|+|||+++ ++++.++. +++|
T Consensus 273 ~~~~~~~~~~~~~~~v~~~~~s~-~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~ 350 (447)
T 3dw8_B 273 EDPSNRSFFSEIISSISDVKFSH-SGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCW 350 (447)
T ss_dssp -----CCHHHHHTTCEEEEEECT-TSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEE
T ss_pred CCccccccccccCceEEEEEECC-CCCEEEEeeC-CeEEEEeCCCCccccceeeccccccccccccccccccccceEEEE
Confidence 2899999999 4679999998 9999999998 88776642 2899
Q ss_pred cCCceEEEecCccceEE
Q 004987 701 NKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 701 ~~~~~~~~~~~~~~~~~ 717 (720)
++....+.+|+.|..-+
T Consensus 351 s~~~~~l~s~s~dg~v~ 367 (447)
T 3dw8_B 351 NGSDSVVMTGSYNNFFR 367 (447)
T ss_dssp CTTSSEEEEECSTTEEE
T ss_pred CCCCCEEEEeccCCEEE
Confidence 99999899988876443
No 350
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.12 E-value=4.5e-10 Score=120.62 Aligned_cols=126 Identities=10% Similarity=-0.030 Sum_probs=86.1
Q ss_pred hhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCC-----------------------------------CEEEE--e
Q 004987 583 LCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDG-----------------------------------ELFAA--A 625 (720)
Q Consensus 583 l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg-----------------------------------~~lat--~ 625 (720)
..++|...+.+.+.++.+ ...|.+++|++++ .++|. |
T Consensus 82 ~v~iWd~~~~~~~~~~~~------~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~sg 155 (355)
T 3vu4_A 82 VVHIWDDVKKQDVSRIKV------DAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSNE 155 (355)
T ss_dssp EEEEEETTTTEEEEEEEC------SSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEEES
T ss_pred EEEEEECCCCcEEEEEEC------CCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEccEEEEeCC
Confidence 445566666666666653 3467777776653 33343 5
Q ss_pred eCCCcEEEeeCCccccccc-------ccccc-eEEe-cCCCCeEEEEEecCCCCEEEEEeCCCc-EEEEECCCCcEEEE-
Q 004987 626 GVNKKIKVFECDAIINENR-------DIHYP-VVEM-ASRSKLSSICWNSYIKSQIASSNFEGV-VQVGQVLHLIYFSA- 694 (720)
Q Consensus 626 ~~d~~i~iwd~~~~~~~~~-------~~~~~-~~~~-~~~~~i~~l~~~~~~~~~laS~s~D~~-v~lWD~~tg~~~~~- 694 (720)
+.|++|+|||+.+...... ..-.| +..+ .|.+.|++|+|+| ++.+||||+.||+ |+|||+++|+++.+
T Consensus 156 ~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~-~g~~l~s~s~d~~~v~iwd~~~~~~~~~~ 234 (355)
T 3vu4_A 156 FNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNR-KSDMVATCSQDGTIIRVFKTEDGVLVREF 234 (355)
T ss_dssp SCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECT-TSSEEEEEETTCSEEEEEETTTCCEEEEE
T ss_pred CcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECC-CCCEEEEEeCCCCEEEEEECCCCcEEEEE
Confidence 6777777777765310000 00013 4444 4577899999999 4679999999999 99999999998775
Q ss_pred --------EEEEeecCCceEEEecCccce
Q 004987 695 --------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 695 --------~~~v~~~~~~~~~~~~~~~~~ 715 (720)
|++++|++....+.+++.|..
T Consensus 235 ~~g~h~~~v~~~~~s~~~~~l~s~s~d~~ 263 (355)
T 3vu4_A 235 RRGLDRADVVDMKWSTDGSKLAVVSDKWT 263 (355)
T ss_dssp ECTTCCSCEEEEEECTTSCEEEEEETTCE
T ss_pred EcCCCCCcEEEEEECCCCCEEEEEECCCE
Confidence 789999999999999988853
No 351
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.12 E-value=4.4e-10 Score=119.61 Aligned_cols=106 Identities=16% Similarity=0.183 Sum_probs=84.9
Q ss_pred CCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccc----------cccccceEEe-cCCCCeEEEEEecCCCCEE
Q 004987 604 LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINEN----------RDIHYPVVEM-ASRSKLSSICWNSYIKSQI 672 (720)
Q Consensus 604 ~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~----------~~~~~~~~~~-~~~~~i~~l~~~~~~~~~l 672 (720)
.+|...|.+++|+|+|.+||+|+.|++|+|||+....... .....++..+ .+...|.+++|+|+ +++|
T Consensus 139 ~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l 217 (372)
T 1k8k_C 139 KPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSAN-GSRV 217 (372)
T ss_dssp TTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSS-SSEE
T ss_pred cccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCC-CCEE
Confidence 4568899999999999999999999999999975321000 0112344455 34678999999995 5799
Q ss_pred EEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEec
Q 004987 673 ASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYG 710 (720)
Q Consensus 673 aS~s~D~~v~lWD~~tg~~~~~-------~~~v~~~~~~~~~~~~ 710 (720)
++++.||+|++||+++++++.+ +++++|++....+..|
T Consensus 218 ~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 262 (372)
T 1k8k_C 218 AWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAG 262 (372)
T ss_dssp EEEETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEE
T ss_pred EEEeCCCEEEEEECCCCceeEEEccCCCCeEEEEEecCCCEEEEE
Confidence 9999999999999999998876 7999999988877776
No 352
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.12 E-value=2.1e-10 Score=136.12 Aligned_cols=120 Identities=14% Similarity=0.143 Sum_probs=97.4
Q ss_pred hhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCe
Q 004987 581 EGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKL 659 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i 659 (720)
++..+.|.+.+.+.+..+. +|.+.|.+++|+|||++||+|+.|++|+|||+.++ ..+..+. |.+.|
T Consensus 34 ~g~v~iwd~~~~~~~~~~~-----~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~--------~~~~~~~~~~~~v 100 (814)
T 3mkq_A 34 SGRVEIWNYETQVEVRSIQ-----VTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTG--------EKVVDFEAHPDYI 100 (814)
T ss_dssp TSEEEEEETTTTEEEEEEE-----CCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTC--------CEEEEEECCSSCE
T ss_pred CCEEEEEECCCCceEEEEe-----cCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCC--------cEEEEEecCCCCE
Confidence 4456677777777777765 45889999999999999999999999999998776 2344444 57789
Q ss_pred EEEEEecCCCCEEEEEeCCCcEEEEECCCC-cEEEE-------EEEEeecC-CceEEEecCccc
Q 004987 660 SSICWNSYIKSQIASSNFEGVVQVGQVLHL-IYFSA-------LYCIVLNK-LLIIFRYGMFQE 714 (720)
Q Consensus 660 ~~l~~~~~~~~~laS~s~D~~v~lWD~~tg-~~~~~-------~~~v~~~~-~~~~~~~~~~~~ 714 (720)
.+++|+|+ +.+||+|+.||+|+|||+.++ .+... |.|++|+| ....+..++.|.
T Consensus 101 ~~~~~s~~-~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg 163 (814)
T 3mkq_A 101 RSIAVHPT-KPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDR 163 (814)
T ss_dssp EEEEECSS-SSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTS
T ss_pred EEEEEeCC-CCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCC
Confidence 99999995 569999999999999999988 44443 89999999 777777777664
No 353
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.12 E-value=3.3e-10 Score=125.51 Aligned_cols=84 Identities=13% Similarity=0.180 Sum_probs=71.1
Q ss_pred CCCCCCCCeEEEEECCC---CCEEEEeeCCCcEEEeeCCcccccccccccceEE-e-cCCCCeEEEEEecCCCCEEEEEe
Q 004987 602 DLLNSSNLVCSLSFDRD---GELFAAAGVNKKIKVFECDAIINENRDIHYPVVE-M-ASRSKLSSICWNSYIKSQIASSN 676 (720)
Q Consensus 602 ~~~~~~~~V~sv~f~~d---g~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~-~-~~~~~i~~l~~~~~~~~~laS~s 676 (720)
.+.+|...|.+|+|+|| |++||||+.|++|+|||+.+. ..+.. + .|.+.|.+++|+ ++.+||||+
T Consensus 190 ~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~--------~~~~~~~~~h~~~v~~~~~s--d~~~l~s~~ 259 (450)
T 2vdu_B 190 PILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQC--------FIVDKWLFGHKHFVSSICCG--KDYLLLSAG 259 (450)
T ss_dssp CSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCT--------TCEEEECCCCSSCEEEEEEC--STTEEEEEE
T ss_pred eeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCC--------ceeeeeecCCCCceEEEEEC--CCCEEEEEe
Confidence 34567899999999999 999999999999999998765 22333 3 357789999999 567999999
Q ss_pred CCCcEEEEECCCCcEEEEE
Q 004987 677 FEGVVQVGQVLHLIYFSAL 695 (720)
Q Consensus 677 ~D~~v~lWD~~tg~~~~~~ 695 (720)
.|++|+|||+.+|+++.++
T Consensus 260 ~d~~v~vwd~~~~~~~~~~ 278 (450)
T 2vdu_B 260 GDDKIFAWDWKTGKNLSTF 278 (450)
T ss_dssp SSSEEEEEETTTCCEEEEE
T ss_pred CCCeEEEEECCCCcEeeee
Confidence 9999999999999987754
No 354
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.12 E-value=2.2e-10 Score=127.12 Aligned_cols=96 Identities=15% Similarity=0.231 Sum_probs=76.8
Q ss_pred CCCCCCCeEEEEECCC-CCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCeEEEEEecCCCCEEEEEeCCCcE
Q 004987 603 LLNSSNLVCSLSFDRD-GELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~d-g~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~laS~s~D~~v 681 (720)
+.+|...|.+|+|+|+ +.+||||+.|++|+|||+++.. .......|...|.+++|+|+ +++||+|+.||+|
T Consensus 145 ~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~-------~~~~~~~~~~~v~~v~wspd-g~~lasgs~dg~v 216 (434)
T 2oit_A 145 LKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETV-------KVCATLPSTVAVTSVCWSPK-GKQLAVGKQNGTV 216 (434)
T ss_dssp CCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSE-------EEEEEECGGGCEEEEEECTT-SSCEEEEETTSCE
T ss_pred cCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCc-------ceeeccCCCCceeEEEEcCC-CCEEEEEcCCCcE
Confidence 4567899999999998 7899999999999999987651 11223345678999999996 6799999999999
Q ss_pred EEEECCCCcEEE--------------EEEEEeecCCceEE
Q 004987 682 QVGQVLHLIYFS--------------ALYCIVLNKLLIIF 707 (720)
Q Consensus 682 ~lWD~~tg~~~~--------------~~~~v~~~~~~~~~ 707 (720)
++||++ ++... .+.++.|++.....
T Consensus 217 ~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l 255 (434)
T 2oit_A 217 VQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFA 255 (434)
T ss_dssp EEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEE
T ss_pred EEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEE
Confidence 999998 54443 47788888765554
No 355
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.11 E-value=5.1e-10 Score=120.91 Aligned_cols=101 Identities=9% Similarity=0.175 Sum_probs=86.7
Q ss_pred CCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCeEEEEEecCCCCEEEEEeCCCcEE
Q 004987 604 LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEGVVQ 682 (720)
Q Consensus 604 ~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~l~~~~~~~~~laS~s~D~~v~ 682 (720)
.+|...|.+++|+|+|++||+|+.|++|+|||+.+. .++..+. +...|.+++|+|++ +|++++.|++|+
T Consensus 244 ~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~--------~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~d~~i~ 313 (425)
T 1r5m_A 244 IGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNG--------NSQNCFYGHSQSIVSASWVGDD--KVISCSMDGSVR 313 (425)
T ss_dssp CCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSB--------SCSEEECCCSSCEEEEEEETTT--EEEEEETTSEEE
T ss_pred ccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCC--------ccceEecCCCccEEEEEECCCC--EEEEEeCCCcEE
Confidence 356889999999999999999999999999998765 2333443 46789999999954 999999999999
Q ss_pred EEECCCCcEEEE-------EEEEeecCCceEEEecCccc
Q 004987 683 VGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 683 lWD~~tg~~~~~-------~~~v~~~~~~~~~~~~~~~~ 714 (720)
+||+.+++++.. +++++|++....+..++.|.
T Consensus 314 i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg 352 (425)
T 1r5m_A 314 LWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDG 352 (425)
T ss_dssp EEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETTS
T ss_pred EEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECCC
Confidence 999999998876 88999999988888877664
No 356
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.11 E-value=9.6e-11 Score=126.95 Aligned_cols=103 Identities=9% Similarity=0.039 Sum_probs=86.0
Q ss_pred CCCCCeEEEEECC-CCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCeEEEEEecCCCCEEEEEeCCCcEE
Q 004987 605 NSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEGVVQ 682 (720)
Q Consensus 605 ~~~~~V~sv~f~~-dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~l~~~~~~~~~laS~s~D~~v~ 682 (720)
+|...|.+++|+| ++.+||+|+.|++|+|||+.+. .++..+. |...|.+++|+|++..+||+++.||+|+
T Consensus 260 ~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~--------~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~ 331 (416)
T 2pm9_A 260 GHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESA--------EQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIE 331 (416)
T ss_dssp CCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSC--------CEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEE
T ss_pred CccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCC--------ccceeecCCCCceEEEEECCCCCCEEEEEecCCcEE
Confidence 6789999999999 9999999999999999998776 2444443 4678999999997668999999999999
Q ss_pred EEECCCCcEEE------------------------------------------EEEEEeecCCceEEEecCccce
Q 004987 683 VGQVLHLIYFS------------------------------------------ALYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 683 lWD~~tg~~~~------------------------------------------~~~~v~~~~~~~~~~~~~~~~~ 715 (720)
|||+.+++... .+++++|++.+..+..|+-|..
T Consensus 332 iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~la~~~~d~~ 406 (416)
T 2pm9_A 332 VQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAFGGKLVQITPDGKG 406 (416)
T ss_dssp EEESCCCCCSSCC----------------------CCSCCCSSCCCCCSTTCCCSCCCEEETTTEEECBCTTSSC
T ss_pred EEEccCCCCCcccccccccccCCcccccccccccccccccccccccCCccccCCccceEEeeCCeEEEEeCCCCe
Confidence 99998776321 1457889999999988887754
No 357
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.10 E-value=8.2e-10 Score=120.21 Aligned_cols=120 Identities=14% Similarity=0.198 Sum_probs=93.7
Q ss_pred hhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCe
Q 004987 581 EGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKL 659 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i 659 (720)
++-.++|...+.+....+.. .|...|.+|+|+|||++||+|+.|++|+|||+.+. ..+..+ .|...|
T Consensus 112 d~~v~lw~~~~~~~~~~~~~----~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~--------~~~~~~~~~~~~v 179 (401)
T 4aez_A 112 ERNVYVWNADSGSVSALAET----DESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQ--------TKLRTMAGHQARV 179 (401)
T ss_dssp TTEEEEEETTTCCEEEEEEC----CTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTC--------CEEEEECCCSSCE
T ss_pred CCeEEEeeCCCCcEeEeeec----CCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCC--------eEEEEecCCCCce
Confidence 34455566555555555542 26889999999999999999999999999998765 234444 457789
Q ss_pred EEEEEecCCCCEEEEEeCCCcEEEEECCC-CcEEEE-------EEEEeecCCceEEEecCccce
Q 004987 660 SSICWNSYIKSQIASSNFEGVVQVGQVLH-LIYFSA-------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 660 ~~l~~~~~~~~~laS~s~D~~v~lWD~~t-g~~~~~-------~~~v~~~~~~~~~~~~~~~~~ 715 (720)
.+++|++ ++|++|+.||+|++||+++ +..+.. |.+++|++....+..|+.|..
T Consensus 180 ~~~~~~~---~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~ 240 (401)
T 4aez_A 180 GCLSWNR---HVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNV 240 (401)
T ss_dssp EEEEEET---TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred EEEEECC---CEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCe
Confidence 9999965 5899999999999999994 444444 899999999888888887643
No 358
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.10 E-value=1.5e-10 Score=122.25 Aligned_cols=104 Identities=9% Similarity=0.022 Sum_probs=81.3
Q ss_pred CCCCCeEEEEECCCCC-EEEEeeC---CCcEEEeeCCcccccccccccceEEecCCCCeEEEEEecCC--CCEEEEEeCC
Q 004987 605 NSSNLVCSLSFDRDGE-LFAAAGV---NKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYI--KSQIASSNFE 678 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~-~lat~~~---d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~--~~~laS~s~D 678 (720)
+|.+.|.+|+|+|+|. ++|+|+. |++|+|||+.+... .++....+...|.+++|+|+. +.+||+|+.|
T Consensus 16 ~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~------~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d 89 (357)
T 3i2n_A 16 GFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDL------KLLREIEKAKPIKCGTFGATSLQQRYLATGDFG 89 (357)
T ss_dssp ECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSE------EEEEEEEESSCEEEEECTTCCTTTCCEEEEETT
T ss_pred CCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcc------cceeeecccCcEEEEEEcCCCCCCceEEEecCC
Confidence 4789999999999996 5667776 99999999876521 123344567899999999974 6899999999
Q ss_pred CcEEEEECCCCc-EEEE-------EEEEe------ecCCceEEEecCccc
Q 004987 679 GVVQVGQVLHLI-YFSA-------LYCIV------LNKLLIIFRYGMFQE 714 (720)
Q Consensus 679 ~~v~lWD~~tg~-~~~~-------~~~v~------~~~~~~~~~~~~~~~ 714 (720)
|+|++||+.+++ ++.. |++++ |++....+.+++.|.
T Consensus 90 g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~ 139 (357)
T 3i2n_A 90 GNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDG 139 (357)
T ss_dssp SCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTS
T ss_pred CeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCC
Confidence 999999999988 6554 78884 567777777777664
No 359
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.10 E-value=1e-09 Score=116.01 Aligned_cols=118 Identities=8% Similarity=0.057 Sum_probs=96.2
Q ss_pred hhhccccc-eEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCeEEE
Q 004987 584 CKYLSFSK-LRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSI 662 (720)
Q Consensus 584 ~~~~~~~~-~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l 662 (720)
..++...+ .+.+..+. .|...|.+++|+|||.+||+|+.|++|+|||+.+. .++..+.+...+.++
T Consensus 199 i~i~d~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~--------~~~~~~~~~~~~~~~ 265 (369)
T 3zwl_B 199 ISKYDVSNNYEYVDSID-----LHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTL--------QVLKKYETDCPLNTA 265 (369)
T ss_dssp EEEEETTTTTEEEEEEE-----CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC--------CEEEEEECSSCEEEE
T ss_pred EEEEECCCCcEeEEEEe-----cCCCceeEEEECCCCCEEEEecCCceEEEEECCCC--------ceeeeecCCCCceeE
Confidence 34444444 45555554 35789999999999999999999999999998776 245555567889999
Q ss_pred EEecCCCCEEEEEeCCC--------------cEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccce
Q 004987 663 CWNSYIKSQIASSNFEG--------------VVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 663 ~~~~~~~~~laS~s~D~--------------~v~lWD~~tg~~~~~-------~~~v~~~~~~~~~~~~~~~~~ 715 (720)
+|+|+ +.+|++++.|+ .|++||+.+++.+.. |++++|++....+.+++.|..
T Consensus 266 ~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~ 338 (369)
T 3zwl_B 266 VITPL-KEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASGGEDGF 338 (369)
T ss_dssp EECSS-SSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred EecCC-CceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCEEEEEcCCCe
Confidence 99995 56899999888 899999999998876 899999999999998887754
No 360
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.09 E-value=3.5e-10 Score=125.26 Aligned_cols=127 Identities=9% Similarity=0.022 Sum_probs=94.3
Q ss_pred hhhhhhcccc--ceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEE-ecCCC
Q 004987 581 EGLCKYLSFS--KLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVE-MASRS 657 (720)
Q Consensus 581 ~~l~~~~~~~--~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~-~~~~~ 657 (720)
++..+.|... ..+.+..+.. ..|...|++++|+|||++||+|+.|++|++||+.+..... .++.. ..|.+
T Consensus 124 dg~v~iwd~~~~~~~~~~~~~~---~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~----~~~~~~~~h~~ 196 (450)
T 2vdu_B 124 DKSLLVFDVDKTSKNVLKLRKR---FCFSKRPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEK----FTQEPILGHVS 196 (450)
T ss_dssp GTEEEEEEECSSSSSCEEEEEE---EECSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSS----CCCCCSEECSS
T ss_pred CCeEEEEECcCCCCceeeeeec---ccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecCCccccc----ccceeeecccC
Confidence 3444555544 3344444431 1346889999999999999999999999999987652110 01112 23567
Q ss_pred CeEEEEEecC--CCCEEEEEeCCCcEEEEECCCCcEEEE--------EEEEeecCCceEEEecCccce
Q 004987 658 KLSSICWNSY--IKSQIASSNFEGVVQVGQVLHLIYFSA--------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 658 ~i~~l~~~~~--~~~~laS~s~D~~v~lWD~~tg~~~~~--------~~~v~~~~~~~~~~~~~~~~~ 715 (720)
.|.+|+|+|+ .+.+|+||+.|++|+|||+.+++++.. |++++|+ ....+.+++.|..
T Consensus 197 ~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~ 263 (450)
T 2vdu_B 197 MLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGDDK 263 (450)
T ss_dssp CEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEEEEESSSE
T ss_pred ceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEEEEeCCCe
Confidence 8999999995 156999999999999999999988765 7999999 8888888887753
No 361
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.09 E-value=5.1e-10 Score=120.91 Aligned_cols=104 Identities=10% Similarity=0.090 Sum_probs=78.6
Q ss_pred CCCeEEEEECCCCC-EEEEeeCCCcEEEeeC----CcccccccccccceEEec-----------CCCCeEEEEEecCCCC
Q 004987 607 SNLVCSLSFDRDGE-LFAAAGVNKKIKVFEC----DAIINENRDIHYPVVEMA-----------SRSKLSSICWNSYIKS 670 (720)
Q Consensus 607 ~~~V~sv~f~~dg~-~lat~~~d~~i~iwd~----~~~~~~~~~~~~~~~~~~-----------~~~~i~~l~~~~~~~~ 670 (720)
.+.|.+++|+|||+ +||+|+.|++|+|||+ .+.... ... .+...+. +.+.|++++|+|+ ++
T Consensus 45 ~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-~~ 121 (425)
T 1r5m_A 45 LDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKY-WKL-TIIAELRHPFALSASSGKTTNQVTCLAWSHD-GN 121 (425)
T ss_dssp CSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------C-EEE-EEEEEEECCCCCC------CBCEEEEEECTT-SS
T ss_pred cCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCcccc-ccc-cccccccccccccccccCCCCceEEEEEcCC-CC
Confidence 68899999999999 9999999999999998 654200 000 0111111 3558999999994 67
Q ss_pred EEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccc
Q 004987 671 QIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 671 ~laS~s~D~~v~lWD~~tg~~~~~-------~~~v~~~~~~~~~~~~~~~~ 714 (720)
+||+|+.||+|+||| .+++.+.. |++++|++....+..++.|.
T Consensus 122 ~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 171 (425)
T 1r5m_A 122 SIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVEN 171 (425)
T ss_dssp EEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTC
T ss_pred EEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCC
Confidence 999999999999999 67777765 89999999988887776654
No 362
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.07 E-value=7.6e-10 Score=122.38 Aligned_cols=116 Identities=8% Similarity=0.063 Sum_probs=92.5
Q ss_pred hhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCC
Q 004987 580 LEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSK 658 (720)
Q Consensus 580 ~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~ 658 (720)
.++..+++...+.+.+..+. +|.+.|.+++|+|+|.+||+|+.|++|+|||+.++ .++..+. |...
T Consensus 288 ~d~~i~vwd~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~--------~~~~~~~~h~~~ 354 (464)
T 3v7d_B 288 YDNTLIVWDVAQMKCLYILS-----GHTDRIYSTIYDHERKRCISASMDTTIRIWDLENG--------ELMYTLQGHTAL 354 (464)
T ss_dssp TTSCEEEEETTTTEEEEEEC-----CCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTT--------EEEEEECCCSSC
T ss_pred CCCeEEEEECCCCcEEEEec-----CCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCC--------cEEEEEeCCCCc
Confidence 34455666666666666654 46899999999999999999999999999998876 2455553 4778
Q ss_pred eEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE------EEEEeecCCceEEEecC
Q 004987 659 LSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA------LYCIVLNKLLIIFRYGM 711 (720)
Q Consensus 659 i~~l~~~~~~~~~laS~s~D~~v~lWD~~tg~~~~~------~~~v~~~~~~~~~~~~~ 711 (720)
|.+++|++ ++|+||+.||+|++||+.+++.... +.+++|++....+..|+
T Consensus 355 v~~~~~~~---~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 410 (464)
T 3v7d_B 355 VGLLRLSD---KFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGS 410 (464)
T ss_dssp EEEEEECS---SEEEEEETTSEEEEEETTTCCEEEEEECTTCCCEEEEEECSSEEEEEE
T ss_pred EEEEEEcC---CEEEEEeCCCcEEEEECCCCceeeeecCCCCccEEEEEeCCCEEEEec
Confidence 99999985 6899999999999999999987765 45677877777777766
No 363
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.05 E-value=8.6e-10 Score=114.15 Aligned_cols=96 Identities=15% Similarity=0.050 Sum_probs=81.0
Q ss_pred CCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCeEEEEEecCCCCEEEEEeCCCcEEEE
Q 004987 606 SSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEGVVQVG 684 (720)
Q Consensus 606 ~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~l~~~~~~~~~laS~s~D~~v~lW 684 (720)
|...|.+++|+|++. |++|+.|++|+|||+++. .++..+. +.+.|.+++|+|++ .|++++.||+|+||
T Consensus 183 ~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~--------~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~dg~v~iw 251 (313)
T 3odt_A 183 HNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTG--------DVLRTYEGHESFVYCIKLLPNG--DIVSCGEDRTVRIW 251 (313)
T ss_dssp CSSCEEEEEEEETTE-EEEEETTSEEEEEETTTC--------CEEEEEECCSSCEEEEEECTTS--CEEEEETTSEEEEE
T ss_pred CcccEEEEEEcCCCe-EEEccCCCeEEEEECCch--------hhhhhhhcCCceEEEEEEecCC--CEEEEecCCEEEEE
Confidence 688999999999999 999999999999998775 2444443 57789999999965 59999999999999
Q ss_pred ECCCCcEEEE-------EEEEeecCCceEEEecCcc
Q 004987 685 QVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 685 D~~tg~~~~~-------~~~v~~~~~~~~~~~~~~~ 713 (720)
|+.+++++.. +++++|++....+. ++.|
T Consensus 252 d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~d 286 (313)
T 3odt_A 252 SKENGSLKQVITLPAISIWSVDCMSNGDIIV-GSSD 286 (313)
T ss_dssp CTTTCCEEEEEECSSSCEEEEEECTTSCEEE-EETT
T ss_pred ECCCCceeEEEeccCceEEEEEEccCCCEEE-EeCC
Confidence 9999998876 89999999877443 4444
No 364
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.05 E-value=1.7e-09 Score=118.64 Aligned_cols=105 Identities=10% Similarity=0.120 Sum_probs=86.2
Q ss_pred CCCCCCCeEEEEECCCCC-EEEE--eeCCCcEEEeeCCcccccccccccceEEecCCCCeEEEEEecCCCCEEEEE--eC
Q 004987 603 LLNSSNLVCSLSFDRDGE-LFAA--AGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASS--NF 677 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~-~lat--~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~laS~--s~ 677 (720)
...|.+.|.+++|+|++. ++|+ |+.|++|+|||+.++ .++..+.++..|.+++|+|+.. .|+++ +.
T Consensus 272 ~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~--------~~~~~~~~~~~v~~~~~~~~~~-~lv~~sg~~ 342 (420)
T 4gga_A 272 FTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSG--------ACLSAVDAHSQVCSILWSPHYK-ELISGHGFA 342 (420)
T ss_dssp ECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTT--------EEEEEEECSSCEEEEEEETTTT-EEEEEECTT
T ss_pred ecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCcc--------ccceeeccccceeeeeecCCCC-eEEEEEecC
Confidence 346789999999999775 5665 458999999998876 3455566677899999999665 55544 37
Q ss_pred CCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceE
Q 004987 678 EGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 678 D~~v~lWD~~tg~~~~~-------~~~v~~~~~~~~~~~~~~~~~~ 716 (720)
|++|+|||+.+++++.+ |++++|+|....+.+|+.|+.-
T Consensus 343 d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tv 388 (420)
T 4gga_A 343 QNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETL 388 (420)
T ss_dssp TCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEE
T ss_pred CCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeE
Confidence 99999999999999987 8999999999999999999753
No 365
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.05 E-value=1.3e-09 Score=112.73 Aligned_cols=108 Identities=12% Similarity=0.167 Sum_probs=80.3
Q ss_pred cceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCeEEEEEecCCC
Q 004987 590 SKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIK 669 (720)
Q Consensus 590 ~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~ 669 (720)
..++++.+++ +|.+.|.+++| |++.+||||+.|++|+|||+.+.. .......+...|.+++|+|+ +
T Consensus 6 ~~~~~~~~l~-----~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~-------~~~~~~~~~~~v~~~~~~~~-~ 71 (313)
T 3odt_A 6 TGYQLSATLK-----GHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQW-------LGTVVYTGQGFLNSVCYDSE-K 71 (313)
T ss_dssp CCCEEEEEEC-----CCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSE-------EEEEEEECSSCEEEEEEETT-T
T ss_pred ccHHHHHHhh-----CCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCE-------EEEEeecCCccEEEEEECCC-C
Confidence 3455666664 46899999999 999999999999999999986641 11222345778999999994 6
Q ss_pred CEEEEEeCCCcEEEEECCCC---cEEEE-------EEEEeecCCceEEEecCcc
Q 004987 670 SQIASSNFEGVVQVGQVLHL---IYFSA-------LYCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 670 ~~laS~s~D~~v~lWD~~tg---~~~~~-------~~~v~~~~~~~~~~~~~~~ 713 (720)
.+||+++.||+|++||+... +.+.. ++++.|+.. .+..++.|
T Consensus 72 ~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~l~~~~~d 123 (313)
T 3odt_A 72 ELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSFQDG--VVISGSWD 123 (313)
T ss_dssp TEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEEETT--EEEEEETT
T ss_pred CEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEecCC--EEEEEeCC
Confidence 79999999999999998765 33333 788888543 34444443
No 366
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.05 E-value=2.1e-09 Score=111.63 Aligned_cols=114 Identities=15% Similarity=0.169 Sum_probs=86.1
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCccccccc------c-------------------------------
Q 004987 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENR------D------------------------------- 645 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~------~------------------------------- 645 (720)
+.+|...+.+++|+++|++|+||+.|++|+|||+++...... .
T Consensus 146 ~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~l 225 (318)
T 4ggc_A 146 LSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRI 225 (318)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEE
T ss_pred EcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEE
Confidence 456789999999999999999999999999999875311100 0
Q ss_pred ----cccceEEecCCCCeEEEEEecCCCCEEE-EEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCcc
Q 004987 646 ----IHYPVVEMASRSKLSSICWNSYIKSQIA-SSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 646 ----~~~~~~~~~~~~~i~~l~~~~~~~~~la-S~s~D~~v~lWD~~tg~~~~~-------~~~v~~~~~~~~~~~~~~~ 713 (720)
.........+...+.+++|+|....+++ +++.|++|+|||+.+++++.+ |+|++|++....+.+|+.|
T Consensus 226 wd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D 305 (318)
T 4ggc_A 226 WNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAAD 305 (318)
T ss_dssp EETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETT
T ss_pred EecccccccccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecC
Confidence 0001112233456788999996654332 345899999999999999987 8999999999999999998
Q ss_pred ceE
Q 004987 714 EVK 716 (720)
Q Consensus 714 ~~~ 716 (720)
..-
T Consensus 306 ~~v 308 (318)
T 4ggc_A 306 ETL 308 (318)
T ss_dssp TEE
T ss_pred CeE
Confidence 743
No 367
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.03 E-value=1.2e-09 Score=120.77 Aligned_cols=98 Identities=11% Similarity=0.155 Sum_probs=78.5
Q ss_pred CCCC-CeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCeEEEEEecCCCCEEEEEeCCCcEE
Q 004987 605 NSSN-LVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEGVVQ 682 (720)
Q Consensus 605 ~~~~-~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~l~~~~~~~~~laS~s~D~~v~ 682 (720)
+|.+ .|.++.| ++.+|||||.|++|+|||+.+. .++..+. |.+.|.+++|+|++ +|+||+.||+|+
T Consensus 119 ~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~--------~~~~~~~~h~~~V~~l~~~~~~--~l~s~s~dg~i~ 186 (464)
T 3v7d_B 119 GHMTSVITCLQF--EDNYVITGADDKMIRVYDSINK--------KFLLQLSGHDGGVWALKYAHGG--ILVSGSTDRTVR 186 (464)
T ss_dssp CCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTT--------EEEEEECCCSSCEEEEEECSTT--EEEEEETTSCEE
T ss_pred CCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCC--------cEEEEEeCCCcCEEEEEEcCCC--EEEEEeCCCCEE
Confidence 3454 4677777 5789999999999999998776 2444444 57789999999854 999999999999
Q ss_pred EEECCCCcEEEE-------EEEEeec--CCceEEEecCccc
Q 004987 683 VGQVLHLIYFSA-------LYCIVLN--KLLIIFRYGMFQE 714 (720)
Q Consensus 683 lWD~~tg~~~~~-------~~~v~~~--~~~~~~~~~~~~~ 714 (720)
|||+.+++++.+ |.|++|+ +....+.+|+.|.
T Consensus 187 vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~ 227 (464)
T 3v7d_B 187 VWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDN 227 (464)
T ss_dssp EEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTS
T ss_pred EEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCC
Confidence 999999998876 7899998 4556677776664
No 368
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.01 E-value=3.2e-09 Score=110.23 Aligned_cols=121 Identities=12% Similarity=0.163 Sum_probs=95.2
Q ss_pred hhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCe
Q 004987 581 EGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKL 659 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i 659 (720)
++-.+.|...+.+++..++ +.+|...|.+|+|+|+|++|||||.|++|+|||+++. .++..+. |...+
T Consensus 44 D~tV~iWd~~tg~~~~~~~---~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~--------~~~~~~~~h~~~~ 112 (318)
T 4ggc_A 44 DNSVYLWSASSGDILQLLQ---MEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQ--------KRLRNMTSHSARV 112 (318)
T ss_dssp TTEEEEEETTTCCEEEEEE---CCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTT--------EEEEEEECCSSCE
T ss_pred CCEEEEEECCCCCEEEEEE---ecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCc--------eeEEEecCccceE
Confidence 4556777777777777765 3467899999999999999999999999999998876 2344443 45567
Q ss_pred EEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEE-E-------EEEEeecCCceEEEecCccce
Q 004987 660 SSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFS-A-------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 660 ~~l~~~~~~~~~laS~s~D~~v~lWD~~tg~~~~-~-------~~~v~~~~~~~~~~~~~~~~~ 715 (720)
.++++++ ..|+|++.|+.+++|+..++.... + +.++.|++....+.+++.|..
T Consensus 113 ~~~~~~~---~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~ 173 (318)
T 4ggc_A 113 GSLSWNS---YILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNL 173 (318)
T ss_dssp EEEEEET---TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred EEeecCC---CEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcc
Confidence 7776664 589999999999999998875443 2 788999999888888877653
No 369
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.00 E-value=3.8e-10 Score=118.78 Aligned_cols=97 Identities=10% Similarity=0.135 Sum_probs=78.8
Q ss_pred CCCCCeEEEEECCCCC-EEEEeeCCCcEEEeeC-CcccccccccccceEEec--CCCCeEEEEEecCCCCEEEEEeCCCc
Q 004987 605 NSSNLVCSLSFDRDGE-LFAAAGVNKKIKVFEC-DAIINENRDIHYPVVEMA--SRSKLSSICWNSYIKSQIASSNFEGV 680 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~-~lat~~~d~~i~iwd~-~~~~~~~~~~~~~~~~~~--~~~~i~~l~~~~~~~~~laS~s~D~~ 680 (720)
+|...|.+++|+|+|+ +||+|+.|++|+|||+ .+.. ...... +...|.+++|+| +++|++++.|++
T Consensus 54 ~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~--------~~~~~~~~~~~~v~~l~~~~--~~~l~s~~~d~~ 123 (342)
T 1yfq_A 54 RYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPS--------FQALTNNEANLGICRICKYG--DDKLIAASWDGL 123 (342)
T ss_dssp ECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSS--------EEECBSCCCCSCEEEEEEET--TTEEEEEETTSE
T ss_pred ecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCc--------eEeccccCCCCceEEEEeCC--CCEEEEEcCCCe
Confidence 5688999999999999 9999999999999998 6652 111223 567899999999 679999999999
Q ss_pred EEEEECCC---------CcEEEE------EEEEeecCCceEEEecCcc
Q 004987 681 VQVGQVLH---------LIYFSA------LYCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 681 v~lWD~~t---------g~~~~~------~~~v~~~~~~~~~~~~~~~ 713 (720)
|++||+++ ++++.+ +++++|++.. +..+..|
T Consensus 124 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--l~~~~~d 169 (342)
T 1yfq_A 124 IEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSR--LIVGMNN 169 (342)
T ss_dssp EEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSE--EEEEEST
T ss_pred EEEEcccccccccccccCCeeeEEeeCCceEEEEecCCc--EEEEeCC
Confidence 99999988 766543 8999999877 4444433
No 370
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.00 E-value=9.5e-10 Score=116.84 Aligned_cols=97 Identities=5% Similarity=0.059 Sum_probs=69.1
Q ss_pred CCCeEEEEECCC----CCEEEEeeC--------------------CCcEEEeeCCcccccccccccceEEecCCCCeEEE
Q 004987 607 SNLVCSLSFDRD----GELFAAAGV--------------------NKKIKVFECDAIINENRDIHYPVVEMASRSKLSSI 662 (720)
Q Consensus 607 ~~~V~sv~f~~d----g~~lat~~~--------------------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l 662 (720)
.+.|++|+|+|| ++++|++|. |++|++|++... .........+...++.+
T Consensus 111 ~~~v~sla~spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~d------G~~~~s~~~~~~~v~~l 184 (356)
T 2w18_A 111 IREIRALFCSSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAED------GGGKENQFLMPPEETIL 184 (356)
T ss_dssp EEEEEEECC------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTT------SCEEEEEEECCCSSCEE
T ss_pred ccceEEEEECCCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCC------CceeeeeccCCCceeeE
Confidence 357899999999 888888774 777777776431 00111122345668888
Q ss_pred EEec--CCCCEEEEEeCCCcEEEEECCCCcEEEEE----------EEEeecCCceEEEe
Q 004987 663 CWNS--YIKSQIASSNFEGVVQVGQVLHLIYFSAL----------YCIVLNKLLIIFRY 709 (720)
Q Consensus 663 ~~~~--~~~~~laS~s~D~~v~lWD~~tg~~~~~~----------~~v~~~~~~~~~~~ 709 (720)
+|+| .++..|||||+|+||||||+.||++++++ .+++|+|....+..
T Consensus 185 ~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs 243 (356)
T 2w18_A 185 TFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIV 243 (356)
T ss_dssp EEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEE
T ss_pred EeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEE
Confidence 8887 34579999999999999999999999884 36789998887643
No 371
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.00 E-value=1.8e-09 Score=128.16 Aligned_cols=125 Identities=14% Similarity=0.078 Sum_probs=94.9
Q ss_pred hhhhhhccccceE--EeeeeccCCCCCCCCCeEEEEECCC--CCEEEEeeCCCcEEEeeCCcccccccccccceEEecCC
Q 004987 581 EGLCKYLSFSKLR--VKADLNQGDLLNSSNLVCSLSFDRD--GELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASR 656 (720)
Q Consensus 581 ~~l~~~~~~~~~~--~~~~l~~~~~~~~~~~V~sv~f~~d--g~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~ 656 (720)
++..++|...+.+ .+.. +.+|...|.+++|+|+ |.+||+|+.|++|+|||+.+... ........+.
T Consensus 76 Dg~I~vwd~~~~~~~~~~~-----~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~-----~~~~~~~~~~ 145 (753)
T 3jro_A 76 DGKVLIWKEENGRWSQIAV-----HAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGT-----TSPIIIDAHA 145 (753)
T ss_dssp TSCEEEEEEETTEEEEEEE-----ECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSC-----CCCEEEECCS
T ss_pred CCeEEEEECCCCccccccc-----ccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCC-----cceeEeecCC
Confidence 3445555554443 3333 3456899999999999 99999999999999999876521 1122333457
Q ss_pred CCeEEEEEecC------------CCCEEEEEeCCCcEEEEECCCCc----EEEE-------EEEEeecCC---ceEEEec
Q 004987 657 SKLSSICWNSY------------IKSQIASSNFEGVVQVGQVLHLI----YFSA-------LYCIVLNKL---LIIFRYG 710 (720)
Q Consensus 657 ~~i~~l~~~~~------------~~~~laS~s~D~~v~lWD~~tg~----~~~~-------~~~v~~~~~---~~~~~~~ 710 (720)
..|.+++|+|. ++.+|++|+.||+|++||++++. ++.+ |++++|+|. ...+.+|
T Consensus 146 ~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~ 225 (753)
T 3jro_A 146 IGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASV 225 (753)
T ss_dssp SCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEE
T ss_pred CceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEE
Confidence 78999999995 46789999999999999999883 3333 899999999 7888888
Q ss_pred Cccce
Q 004987 711 MFQEV 715 (720)
Q Consensus 711 ~~~~~ 715 (720)
+.|..
T Consensus 226 s~Dg~ 230 (753)
T 3jro_A 226 SQDRT 230 (753)
T ss_dssp ESSSC
T ss_pred ecCCE
Confidence 87753
No 372
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=98.99 E-value=3.3e-09 Score=113.98 Aligned_cols=104 Identities=11% Similarity=0.052 Sum_probs=86.5
Q ss_pred CCCCCCCeEEEEECC-CCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCeEEEEEecCCC--CEEEEEeCCC
Q 004987 603 LLNSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIK--SQIASSNFEG 679 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~-dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~--~~laS~s~D~ 679 (720)
..+|...|.+++|+| ++.+||||+.|++|+|||+.+. .++..+.+...+.+++|+|... .+|++++.||
T Consensus 95 ~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (408)
T 4a11_B 95 PDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTL--------QTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGP 166 (408)
T ss_dssp TTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTT--------EEEEEEECSSCEEEEEECSSCSSCCEEEEEESSS
T ss_pred cccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCC--------ccceeccCCCceeeeEeecCCCCCcEEEEEcCCC
Confidence 456899999999999 7789999999999999998876 2445555677899999998643 3999999999
Q ss_pred cEEEEECCCCcEEEE-------EEEEeecCCce-EEEecCccc
Q 004987 680 VVQVGQVLHLIYFSA-------LYCIVLNKLLI-IFRYGMFQE 714 (720)
Q Consensus 680 ~v~lWD~~tg~~~~~-------~~~v~~~~~~~-~~~~~~~~~ 714 (720)
.|++||+.+++++.. |+|++|++... .+..|+.|.
T Consensus 167 ~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg 209 (408)
T 4a11_B 167 KVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADS 209 (408)
T ss_dssp SEEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTS
T ss_pred eEEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCC
Confidence 999999999988776 89999999876 465665553
No 373
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=98.99 E-value=2.7e-09 Score=114.88 Aligned_cols=101 Identities=13% Similarity=0.158 Sum_probs=85.2
Q ss_pred CCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec----C---CCCeEEEEEecCCCCEEEEEeC
Q 004987 605 NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA----S---RSKLSSICWNSYIKSQIASSNF 677 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~----~---~~~i~~l~~~~~~~~~laS~s~ 677 (720)
.|...|.+++|+|+| +||+|+.|++|+|||+++. .++..+. | ...|.+++|+|+ +.+||+++.
T Consensus 184 ~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~--------~~~~~~~~~~~h~~~~~~i~~i~~~~~-~~~l~~~~~ 253 (397)
T 1sq9_A 184 TPSQFATSVDISERG-LIATGFNNGTVQISELSTL--------RPLYNFESQHSMINNSNSIRSVKFSPQ-GSLLAIAHD 253 (397)
T ss_dssp SSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTT--------EEEEEEECCC---CCCCCEEEEEECSS-TTEEEEEEE
T ss_pred CCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCC--------ceeEEEeccccccccCCccceEEECCC-CCEEEEEec
Confidence 468899999999999 9999999999999998765 2444444 3 678999999995 579999999
Q ss_pred C---CcEEEEECCCCcEEEE--------------------EEEEeecCCceEEEecCccce
Q 004987 678 E---GVVQVGQVLHLIYFSA--------------------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 678 D---~~v~lWD~~tg~~~~~--------------------~~~v~~~~~~~~~~~~~~~~~ 715 (720)
| |+|+|||+++++++.+ |++++|++....+..++-|..
T Consensus 254 d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~ 314 (397)
T 1sq9_A 254 SNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGK 314 (397)
T ss_dssp ETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSE
T ss_pred CCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCe
Confidence 9 9999999999987764 578999999888888877653
No 374
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.97 E-value=4.1e-09 Score=116.17 Aligned_cols=116 Identities=9% Similarity=0.182 Sum_probs=90.4
Q ss_pred hhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec----CC
Q 004987 581 EGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA----SR 656 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~----~~ 656 (720)
++..+++...+.+.+.++. +|...|.+++| ++.+|++|+.|++|+|||+.+. .++..+. +.
T Consensus 298 d~~i~i~d~~~~~~~~~~~-----~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~--------~~~~~~~~~~~~~ 362 (445)
T 2ovr_B 298 DTSIRVWDVETGNCIHTLT-----GHQSLTSGMEL--KDNILVSGNADSTVKIWDIKTG--------QCLQTLQGPNKHQ 362 (445)
T ss_dssp TSCEEEEETTTCCEEEEEC-----CCCSCEEEEEE--ETTEEEEEETTSCEEEEETTTC--------CEEEEECSTTSCS
T ss_pred CCeEEEEECCCCCEEEEEc-----CCcccEEEEEE--eCCEEEEEeCCCeEEEEECCCC--------cEEEEEccCCCCC
Confidence 3445555655666665554 45788888887 4679999999999999998765 2333433 46
Q ss_pred CCeEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE------------EEEEeecCCceEEEecCccc
Q 004987 657 SKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA------------LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 657 ~~i~~l~~~~~~~~~laS~s~D~~v~lWD~~tg~~~~~------------~~~v~~~~~~~~~~~~~~~~ 714 (720)
..|.+++|++ ++||+|+.||+|+|||+.+|+.+.+ |++++|++....+..|+.|.
T Consensus 363 ~~v~~~~~~~---~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg 429 (445)
T 2ovr_B 363 SAVTCLQFNK---NFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNG 429 (445)
T ss_dssp SCEEEEEECS---SEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSS
T ss_pred CCEEEEEECC---CEEEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCC
Confidence 6799999975 6899999999999999999998764 79999999999988888775
No 375
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=98.95 E-value=6.4e-09 Score=111.92 Aligned_cols=117 Identities=8% Similarity=-0.016 Sum_probs=89.0
Q ss_pred hhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEE-EEeeCCCcEEEeeCCcccccccccccceEEecCCCCeEE
Q 004987 583 LCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELF-AAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSS 661 (720)
Q Consensus 583 l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~l-at~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~ 661 (720)
-.+.+...+.+++..+.+ ...+.+++|+|||+++ ++++.|++|++||+.+. ..+..+..+..+.+
T Consensus 13 ~v~v~d~~~~~~~~~~~~------~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~--------~~~~~~~~~~~v~~ 78 (391)
T 1l0q_A 13 NISVIDVTSNKVTATIPV------GSNPMGAVISPDGTKVYVANAHSNDVSIIDTATN--------NVIATVPAGSSPQG 78 (391)
T ss_dssp EEEEEETTTTEEEEEEEC------SSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTT--------EEEEEEECSSSEEE
T ss_pred EEEEEECCCCeEEEEeec------CCCcceEEECCCCCEEEEECCCCCeEEEEECCCC--------eEEEEEECCCCccc
Confidence 345555666677777763 2448999999999975 78889999999998776 23445555668999
Q ss_pred EEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE------EEEEeecCCceEE-EecCcc
Q 004987 662 ICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA------LYCIVLNKLLIIF-RYGMFQ 713 (720)
Q Consensus 662 l~~~~~~~~~laS~s~D~~v~lWD~~tg~~~~~------~~~v~~~~~~~~~-~~~~~~ 713 (720)
++|+|++..++++++.|++|++||+.+++.+.. +++++|++....+ ..+.-+
T Consensus 79 ~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~ 137 (391)
T 1l0q_A 79 VAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGD 137 (391)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTT
T ss_pred eEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCCCCcceEEECCCCCEEEEEeCCC
Confidence 999996654446777789999999999998876 7899999987644 455433
No 376
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=98.94 E-value=6.5e-09 Score=118.46 Aligned_cols=99 Identities=15% Similarity=0.258 Sum_probs=82.5
Q ss_pred hhhhhhccccceEEeeeeccCCCCCCCC---CeEEEEECCC-CCEEEEeeCCCcEEEeeCCcccccccccccceEEe---
Q 004987 581 EGLCKYLSFSKLRVKADLNQGDLLNSSN---LVCSLSFDRD-GELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM--- 653 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~---~V~sv~f~~d-g~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~--- 653 (720)
++..++|...+.+.+..++ +|.. .|.+++|+|+ |++||+|+.|++|+|||+.+. .++..+
T Consensus 182 d~~v~vwd~~~~~~~~~~~-----~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~--------~~~~~~~~~ 248 (615)
T 1pgu_A 182 DGSVVFYQGPPFKFSASDR-----THHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSG--------EFLKYIEDD 248 (615)
T ss_dssp TTEEEEEETTTBEEEEEEC-----SSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTC--------CEEEECCBT
T ss_pred CCcEEEEeCCCcceeeeec-----ccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCC--------CEeEEeccc
Confidence 4456667777777777775 2466 8999999999 999999999999999998776 244455
Q ss_pred --cCCCCeEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE
Q 004987 654 --ASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA 694 (720)
Q Consensus 654 --~~~~~i~~l~~~~~~~~~laS~s~D~~v~lWD~~tg~~~~~ 694 (720)
.+...|.+++|+ ++.+|++++.||+|++||+.+++++.+
T Consensus 249 ~~~~~~~v~~~~~~--~~~~l~~~~~d~~i~~wd~~~~~~~~~ 289 (615)
T 1pgu_A 249 QEPVQGGIFALSWL--DSQKFATVGADATIRVWDVTTSKCVQK 289 (615)
T ss_dssp TBCCCSCEEEEEES--SSSEEEEEETTSEEEEEETTTTEEEEE
T ss_pred ccccCCceEEEEEc--CCCEEEEEcCCCcEEEEECCCCcEEEE
Confidence 567789999999 567999999999999999999998876
No 377
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=98.92 E-value=1.8e-10 Score=124.67 Aligned_cols=90 Identities=7% Similarity=0.063 Sum_probs=64.9
Q ss_pred CCCCCceecccceeecCC--CCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCC
Q 004987 74 GDHLRNQGGLSGVCENEA--AIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPS 150 (720)
Q Consensus 74 l~HpnIV~l~~~~~~~~~--~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~gIvHrDLKP~ 150 (720)
..|+|+++++........ .....++|||| .|.+|.++.. ..++..++.||+.+|.+||++|||||||||.
T Consensus 162 kE~~nL~rL~~~gv~vp~p~~~~~~~LVME~i~G~~L~~l~~-------~~~~~~l~~qll~~l~~lH~~gIVHrDLKp~ 234 (397)
T 4gyi_A 162 KEFAFMKALYEEGFPVPEPIAQSRHTIVMSLVDALPMRQVSS-------VPDPASLYADLIALILRLAKHGLIHGDFNEF 234 (397)
T ss_dssp HHHHHHHHHHHTTCSCCCEEEEETTEEEEECCSCEEGGGCCC-------CSCHHHHHHHHHHHHHHHHHTTEECSCCSTT
T ss_pred HHHHHHHHHHhcCCCCCeeeeccCceEEEEecCCccHhhhcc-------cHHHHHHHHHHHHHHHHHHHCCCcCCCCCHH
Confidence 346777766652221110 00112699999 8888876431 1235678999999999999999999999999
Q ss_pred cEEEccCC----------ceEEeccCcccC
Q 004987 151 CFVMSSFN----------HVSFIESASCSD 170 (720)
Q Consensus 151 NILl~~~~----------~vkliDfg~a~~ 170 (720)
|||++.+| .+.+|||+.+..
T Consensus 235 NILl~~dgd~~d~~~~~~~~~iID~~Q~V~ 264 (397)
T 4gyi_A 235 NILIREEKDAEDPSSITLTPIIIXFPQMVS 264 (397)
T ss_dssp SEEEEEEECSSCTTSEEEEEEECCCTTCEE
T ss_pred HEEEeCCCCcccccccccceEEEEeCCccc
Confidence 99999777 389999997743
No 378
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.92 E-value=8.5e-09 Score=113.45 Aligned_cols=94 Identities=12% Similarity=0.142 Sum_probs=75.8
Q ss_pred CCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCeEEEEEecCCCCEEEEEeCCCcEEE
Q 004987 605 NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGVVQV 683 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~~~~~~~~~laS~s~D~~v~l 683 (720)
+|...|.|++| ||++||+|+.|++|+|||+.+. ..+..+ .|.+.|.+++|+ +++||||+.||+|+|
T Consensus 131 ~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~--------~~~~~~~~h~~~v~~l~~~---~~~l~sg~~dg~i~v 197 (435)
T 1p22_A 131 ETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTL--------ECKRILTGHTGSVLCLQYD---ERVIITGSSDSTVRV 197 (435)
T ss_dssp SSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSC--------CEEEEECCCSSCEEEEECC---SSEEEEEETTSCEEE
T ss_pred CCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCC--------eEEEEEcCCCCcEEEEEEC---CCEEEEEcCCCeEEE
Confidence 45678999988 7999999999999999998765 233344 357789999993 469999999999999
Q ss_pred EECCCCcEEEE-------EEEEeecCCceEEEecCcc
Q 004987 684 GQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 684 WD~~tg~~~~~-------~~~v~~~~~~~~~~~~~~~ 713 (720)
||+.+++++.+ |.+++|++. .+..|+.|
T Consensus 198 wd~~~~~~~~~~~~h~~~v~~l~~~~~--~l~s~s~d 232 (435)
T 1p22_A 198 WDVNTGEMLNTLIHHCEAVLHLRFNNG--MMVTCSKD 232 (435)
T ss_dssp EESSSCCEEEEECCCCSCEEEEECCTT--EEEEEETT
T ss_pred EECCCCcEEEEEcCCCCcEEEEEEcCC--EEEEeeCC
Confidence 99999999886 889999864 44444444
No 379
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.89 E-value=1.1e-08 Score=112.60 Aligned_cols=106 Identities=10% Similarity=0.129 Sum_probs=83.9
Q ss_pred hhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCC
Q 004987 580 LEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSK 658 (720)
Q Consensus 580 ~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~ 658 (720)
.++..+.|...+.+.+..++ +|.+.|.+++|+ +.+|||||.|++|+|||+.+. .++..+. |...
T Consensus 137 ~dg~i~vwd~~~~~~~~~~~-----~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~--------~~~~~~~~h~~~ 201 (445)
T 2ovr_B 137 DDNTLKVWSAVTGKCLRTLV-----GHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETG--------ECIHTLYGHTST 201 (445)
T ss_dssp TTSCEEEEETTTCCEEEECC-----CCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTT--------EEEEEECCCSSC
T ss_pred CCCcEEEEECCCCcEEEEEc-----CCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcC--------cEEEEECCCCCc
Confidence 34455666666666666654 568999999997 679999999999999998776 2334443 4678
Q ss_pred eEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCC
Q 004987 659 LSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKL 703 (720)
Q Consensus 659 i~~l~~~~~~~~~laS~s~D~~v~lWD~~tg~~~~~-------~~~v~~~~~ 703 (720)
|.+++|++ +.|++|+.||+|++||+.+++++.. +.|+.|+..
T Consensus 202 v~~~~~~~---~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~ 250 (445)
T 2ovr_B 202 VRCMHLHE---KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGR 250 (445)
T ss_dssp EEEEEEET---TEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEECSS
T ss_pred EEEEEecC---CEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEECCC
Confidence 99999975 5799999999999999999998876 788888543
No 380
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.88 E-value=1.4e-08 Score=111.62 Aligned_cols=97 Identities=13% Similarity=0.260 Sum_probs=79.3
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCeEEEEEecCCCCEEEEEeCCCcE
Q 004987 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~l~~~~~~~~~laS~s~D~~v 681 (720)
+.+|...|.+++| +|++||+|+.|++|+|||+++. .++..+. +...|.+++|++ ++|++|+.||+|
T Consensus 252 ~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~--------~~~~~~~~~~~~v~~~~~~~---~~l~~g~~dg~i 318 (435)
T 1p22_A 252 LVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTC--------EFVRTLNGHKRGIACLQYRD---RLVVSGSSDNTI 318 (435)
T ss_dssp ECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTC--------CEEEEEECCSSCEEEEEEET---TEEEEEETTSCE
T ss_pred ecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcC--------cEEEEEcCCCCcEEEEEeCC---CEEEEEeCCCeE
Confidence 4577899999999 8999999999999999998876 2444443 467899999964 699999999999
Q ss_pred EEEECCCCcEEEE-------EEEEeecCCceEEEecCccc
Q 004987 682 QVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 682 ~lWD~~tg~~~~~-------~~~v~~~~~~~~~~~~~~~~ 714 (720)
+|||+++|+++.+ |+|++|+. ..+..|+.|.
T Consensus 319 ~iwd~~~~~~~~~~~~h~~~v~~~~~~~--~~l~sg~~dg 356 (435)
T 1p22_A 319 RLWDIECGACLRVLEGHEELVRCIRFDN--KRIVSGAYDG 356 (435)
T ss_dssp EEEETTTCCEEEEECCCSSCEEEEECCS--SEEEEEETTS
T ss_pred EEEECCCCCEEEEEeCCcCcEEEEEecC--CEEEEEeCCC
Confidence 9999999999887 88999954 4455555543
No 381
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=98.86 E-value=7.3e-09 Score=113.09 Aligned_cols=119 Identities=9% Similarity=0.011 Sum_probs=91.2
Q ss_pred hhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCeEEEE
Q 004987 585 KYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSIC 663 (720)
Q Consensus 585 ~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~l~ 663 (720)
..+...+.+++..+..+.+.+|...|.+++|+|+|.++++++.|++|++||+.+. .++..+. +...+.+++
T Consensus 147 ~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~--------~~~~~~~~~~~~~~~~~ 218 (433)
T 3bws_A 147 DVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTL--------AYKATVDLTGKWSKILL 218 (433)
T ss_dssp EEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTC--------CEEEEEECSSSSEEEEE
T ss_pred EEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCc--------eEEEEEcCCCCCeeEEE
Confidence 4444455555554444456678899999999999999999999999999998765 2333333 466799999
Q ss_pred EecCCCCEEEEEeCCCcEEEEECCCCcEEEE------EEEEeecCCceEEEecC
Q 004987 664 WNSYIKSQIASSNFEGVVQVGQVLHLIYFSA------LYCIVLNKLLIIFRYGM 711 (720)
Q Consensus 664 ~~~~~~~~laS~s~D~~v~lWD~~tg~~~~~------~~~v~~~~~~~~~~~~~ 711 (720)
|+|++..++++++.|++|++||+.+++.+.. +.+++|++....+..+.
T Consensus 219 ~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~ 272 (433)
T 3bws_A 219 YDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIGLPRGLLLSKDGKELYIAQ 272 (433)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTTTEEEEECCCCSEEEEEEECTTSSEEEEEE
T ss_pred EcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCCCCceEEEEcCCCCEEEEEE
Confidence 9997654446777899999999999998876 78999998876555544
No 382
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=98.84 E-value=3.2e-08 Score=106.39 Aligned_cols=119 Identities=8% Similarity=-0.022 Sum_probs=90.4
Q ss_pred hhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEE-EEeeCCCcEEEeeCCcccccccccccceEEecCCCCe
Q 004987 581 EGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELF-AAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKL 659 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~l-at~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i 659 (720)
++-.+.+...+.+++..+.+ ...|.+++|+|||++| ++++.|++|++||+.+. ..+..+.++..+
T Consensus 53 d~~i~v~d~~~~~~~~~~~~------~~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~--------~~~~~~~~~~~~ 118 (391)
T 1l0q_A 53 SNDVSIIDTATNNVIATVPA------GSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSN--------TVAGTVKTGKSP 118 (391)
T ss_dssp GTEEEEEETTTTEEEEEEEC------SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTT--------EEEEEEECSSSE
T ss_pred CCeEEEEECCCCeEEEEEEC------CCCccceEECCCCCEEEEEECCCCEEEEEECCCC--------eEEEEEeCCCCc
Confidence 34455666667777777764 2389999999999976 55567799999998775 234445556789
Q ss_pred EEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE------EEEEeecCCceEE-EecCcc
Q 004987 660 SSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA------LYCIVLNKLLIIF-RYGMFQ 713 (720)
Q Consensus 660 ~~l~~~~~~~~~laS~s~D~~v~lWD~~tg~~~~~------~~~v~~~~~~~~~-~~~~~~ 713 (720)
.+++|+|+++.++++++.|++|++||+.+++.+.. +.+++|++....+ ..+.-+
T Consensus 119 ~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~ 179 (391)
T 1l0q_A 119 LGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDS 179 (391)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTT
T ss_pred ceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCCCcceEEECCCCCEEEEEeCCC
Confidence 99999996554448999999999999999998876 6789999887544 555444
No 383
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=98.76 E-value=3.9e-08 Score=107.99 Aligned_cols=99 Identities=9% Similarity=-0.092 Sum_probs=78.1
Q ss_pred CCCCCeEEEEECCCCCEEEEeeCCC---cEEEeeCCcccccccccccceEEecCCCCeEEEEEecCCCCEEE-EEeCCCc
Q 004987 605 NSSNLVCSLSFDRDGELFAAAGVNK---KIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIA-SSNFEGV 680 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~~lat~~~d~---~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~la-S~s~D~~ 680 (720)
+|...|.+++|+|||++||+++.|+ +|++||+.++. +.....+...+.+++|+|++ ..|| +++.|+.
T Consensus 176 ~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~--------~~~l~~~~~~~~~~~~spdg-~~la~~~~~~g~ 246 (415)
T 2hqs_A 176 RSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGA--------VRQVASFPRHNGAPAFSPDG-SKLAFALSKTGS 246 (415)
T ss_dssp EESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC--------EEEEECCSSCEEEEEECTTS-SEEEEEECTTSS
T ss_pred CCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCc--------EEEeecCCCcccCEEEcCCC-CEEEEEEecCCC
Confidence 4578899999999999999999886 99999988762 22223345679999999965 5666 8877766
Q ss_pred --EEEEECCCCcEEEE------EEEEeecCCceEEEecCc
Q 004987 681 --VQVGQVLHLIYFSA------LYCIVLNKLLIIFRYGMF 712 (720)
Q Consensus 681 --v~lWD~~tg~~~~~------~~~v~~~~~~~~~~~~~~ 712 (720)
|.+||+.++++..- +.+++|+|....+.+++-
T Consensus 247 ~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdg~~l~~~s~ 286 (415)
T 2hqs_A 247 LNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSD 286 (415)
T ss_dssp CEEEEEETTTCCEEECCCCSSCEEEEEECTTSSEEEEEEC
T ss_pred ceEEEEECCCCCEEeCcCCCCcccceEECCCCCEEEEEEC
Confidence 99999999987442 789999999887776554
No 384
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=98.64 E-value=2.5e-07 Score=100.77 Aligned_cols=118 Identities=11% Similarity=0.065 Sum_probs=87.4
Q ss_pred hhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEE-EEeeCCCcEEEeeCCcccccccccccceEEecCCCCeE
Q 004987 582 GLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELF-AAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLS 660 (720)
Q Consensus 582 ~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~l-at~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~ 660 (720)
+-.+.+...+.+.+..+. .|...|.+++|+|||+++ ++++.|++|++||+++. .++..+.....+.
T Consensus 191 ~~v~~~d~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~--------~~~~~~~~~~~~~ 257 (433)
T 3bws_A 191 NAVHVFDLKTLAYKATVD-----LTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTK--------LEIRKTDKIGLPR 257 (433)
T ss_dssp TEEEEEETTTCCEEEEEE-----CSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTT--------EEEEECCCCSEEE
T ss_pred CEEEEEECCCceEEEEEc-----CCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCC--------cEEEEecCCCCce
Confidence 344555555556666654 347889999999999976 56668999999998765 2344455556799
Q ss_pred EEEEecCCCCEEEEEe--------CCCcEEEEECCCCcEEEE------EEEEeecCCce-EEEecCcc
Q 004987 661 SICWNSYIKSQIASSN--------FEGVVQVGQVLHLIYFSA------LYCIVLNKLLI-IFRYGMFQ 713 (720)
Q Consensus 661 ~l~~~~~~~~~laS~s--------~D~~v~lWD~~tg~~~~~------~~~v~~~~~~~-~~~~~~~~ 713 (720)
+++|+|+ +.+|++++ .|++|++||+.+++.+.. +.+++|++... .+..+..+
T Consensus 258 ~~~~~~~-g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~ 324 (433)
T 3bws_A 258 GLLLSKD-GKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMCC 324 (433)
T ss_dssp EEEECTT-SSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEEETTT
T ss_pred EEEEcCC-CCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCCcceEEECCCCCEEEEEecCC
Confidence 9999995 45888887 489999999999987765 67899998873 44554433
No 385
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=98.40 E-value=1.1e-06 Score=100.08 Aligned_cols=97 Identities=8% Similarity=0.062 Sum_probs=76.0
Q ss_pred hhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeC--CcccccccccccceEEecCCCCeEEE
Q 004987 585 KYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFEC--DAIINENRDIHYPVVEMASRSKLSSI 662 (720)
Q Consensus 585 ~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~--~~~~~~~~~~~~~~~~~~~~~~i~~l 662 (720)
..+.-.+.+++.++.. ++. +.+++|+|||++|++++.|++|++||+ .+. ..+.++........|
T Consensus 162 ~v~D~~t~~~~~~i~~----g~~--~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~--------~~~~~i~~g~~p~~v 227 (543)
T 1nir_A 162 ALVDGDSKKIVKVIDT----GYA--VHISRMSASGRYLLVIGRDARIDMIDLWAKEP--------TKVAEIKIGIEARSV 227 (543)
T ss_dssp EEEETTTCCEEEEEEC----STT--EEEEEECTTSCEEEEEETTSEEEEEETTSSSC--------EEEEEEECCSEEEEE
T ss_pred EEEECCCceEEEEEec----Ccc--cceEEECCCCCEEEEECCCCeEEEEECcCCCC--------cEEEEEecCCCcceE
Confidence 4455567777777763 122 899999999999999999999999998 544 234455556678999
Q ss_pred EEecC---CCCEEEEEeC-CCcEEEEECCCCcEEEEE
Q 004987 663 CWNSY---IKSQIASSNF-EGVVQVGQVLHLIYFSAL 695 (720)
Q Consensus 663 ~~~~~---~~~~laS~s~-D~~v~lWD~~tg~~~~~~ 695 (720)
+|+|+ ++.+|+++++ |++|+|||..|+++++++
T Consensus 228 a~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i 264 (543)
T 1nir_A 228 ESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIV 264 (543)
T ss_dssp EECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEE
T ss_pred EeCCCcCCCCCEEEEEEccCCeEEEEeccccccceee
Confidence 99992 3458888885 899999999999998874
No 386
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=98.39 E-value=1.8e-06 Score=94.72 Aligned_cols=102 Identities=7% Similarity=-0.140 Sum_probs=76.7
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeC-CC--cEEEeeCCcccccccccccceEEe-cCCCCeEEEEEecCCCCEEEEEeCC
Q 004987 603 LLNSSNLVCSLSFDRDGELFAAAGV-NK--KIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFE 678 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~-d~--~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~~~~~~~~~laS~s~D 678 (720)
+.+|...+.+++|+|||++||+++. ++ +|.+||+.+.. +..+ .+...+.+++|+|+ +.+||+++.|
T Consensus 262 l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~---------~~~l~~~~~~~~~~~~spd-G~~l~~~~~~ 331 (415)
T 2hqs_A 262 VTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGA---------PQRITWEGSQNQDADVSSD-GKFMVMVSSN 331 (415)
T ss_dssp CCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSC---------CEECCCSSSEEEEEEECTT-SSEEEEEEEC
T ss_pred CcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCC---------EEEEecCCCcccCeEECCC-CCEEEEEECc
Confidence 4556789999999999999988886 44 67777876651 1122 23456889999996 4688877764
Q ss_pred ---CcEEEEECCCCcEEEE-----EEEEeecCCceEEEecCccc
Q 004987 679 ---GVVQVGQVLHLIYFSA-----LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 679 ---~~v~lWD~~tg~~~~~-----~~~v~~~~~~~~~~~~~~~~ 714 (720)
.+|.+||+.+++...- +++++|++....+.+++-+.
T Consensus 332 ~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~spdg~~l~~~s~~~ 375 (415)
T 2hqs_A 332 GGQQHIAKQDLATGGVQVLSSTFLDETPSLAPNGTMVIYSSSQG 375 (415)
T ss_dssp SSCEEEEEEETTTCCEEECCCSSSCEEEEECTTSSEEEEEEEET
T ss_pred CCceEEEEEECCCCCEEEecCCCCcCCeEEcCCCCEEEEEEcCC
Confidence 6899999999987432 78999999988777776554
No 387
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=98.31 E-value=2.3e-06 Score=105.01 Aligned_cols=100 Identities=15% Similarity=0.095 Sum_probs=78.0
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCeEEEEEecCCCCEEEEEeCCC--
Q 004987 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEG-- 679 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~~~~~~~~~laS~s~D~-- 679 (720)
+.+|...|.+++|+|||++||+++.+++|++||+.++. ..... .+...|.+++|+|+ +.+||+++.++
T Consensus 374 l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~--------~~~~~~~~~~~v~~~~~SpD-G~~la~~~~~~~~ 444 (1045)
T 1k32_A 374 FEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGK--------PTVIERSREAMITDFTISDN-SRFIAYGFPLKHG 444 (1045)
T ss_dssp CCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCC--------EEEEEECSSSCCCCEEECTT-SCEEEEEEEECSS
T ss_pred ecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCc--------eEEeccCCCCCccceEECCC-CCeEEEEecCccc
Confidence 34667889999999999999999999999999987762 22222 34667899999995 46888877654
Q ss_pred --------cEEEEECCCCcEEEE------EEEEeecCCceEEEecC
Q 004987 680 --------VVQVGQVLHLIYFSA------LYCIVLNKLLIIFRYGM 711 (720)
Q Consensus 680 --------~v~lWD~~tg~~~~~------~~~v~~~~~~~~~~~~~ 711 (720)
+|++||+.+|+...- +++++|++.+..+...+
T Consensus 445 ~~~~~~~~~i~l~d~~~g~~~~l~~~~~~~~~~~~spdG~~l~~~s 490 (1045)
T 1k32_A 445 ETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLS 490 (1045)
T ss_dssp TTCSCCEEEEEEEETTTTEEEECSCSSSBEEEEEECTTSCEEEEEE
T ss_pred cccCCCCCeEEEEECCCCcEEEeeCCCcccCCceEcCCCCEEEEEe
Confidence 999999999883321 67899999887665544
No 388
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=98.30 E-value=3.8e-07 Score=93.23 Aligned_cols=95 Identities=12% Similarity=-0.025 Sum_probs=71.0
Q ss_pred eeehhhhcccCC-CCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH--
Q 004987 64 KHSDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-- 139 (720)
Q Consensus 64 ~~~e~~~L~~l~-HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs-- 139 (720)
..+|..+|..+. |..+.++++ +.... ...|+|||| .|.+|.+.+. +......++.+++.+|..||+
T Consensus 56 ~~~E~~~l~~l~~~~~vP~v~~-~~~~~---~~~~lv~e~i~G~~l~~~~~------~~~~~~~~~~~l~~~l~~LH~~~ 125 (263)
T 3tm0_A 56 VEREKDMMLWLEGKLPVPKVLH-FERHD---GWSNLLMSEADGVLCSEEYE------DEQSPEKIIELYAECIRLFHSID 125 (263)
T ss_dssp HHHHHHHHHHHTTTSCCCCEEE-EEEET---TEEEEEEECCSSEEHHHHCC------TTTCHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHhcCCCCCeEEE-EEecC---CceEEEEEecCCeehhhccC------CcccHHHHHHHHHHHHHHHhCCC
Confidence 445666776653 566777877 44333 357999999 9999988641 122345788999999999998
Q ss_pred ---------------------------------------------------------cCceeccCCCCcEEEccCCceEE
Q 004987 140 ---------------------------------------------------------QGIVVHNVRPSCFVMSSFNHVSF 162 (720)
Q Consensus 140 ---------------------------------------------------------~gIvHrDLKP~NILl~~~~~vkl 162 (720)
..++|+|++|.|||++..+.+.+
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~l 205 (263)
T 3tm0_A 126 ISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGF 205 (263)
T ss_dssp CTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEE
T ss_pred cccCCCcchHHHHHHHHHHHHhccccccccccccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEE
Confidence 55899999999999976555679
Q ss_pred eccCcc
Q 004987 163 IESASC 168 (720)
Q Consensus 163 iDfg~a 168 (720)
|||+.+
T Consensus 206 IDwe~a 211 (263)
T 3tm0_A 206 IDLGRS 211 (263)
T ss_dssp CCCTTC
T ss_pred EEchhc
Confidence 999876
No 389
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=98.23 E-value=2.9e-06 Score=88.54 Aligned_cols=102 Identities=11% Similarity=-0.009 Sum_probs=71.5
Q ss_pred ceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCC-CcEEEeeCC--cccccccccccceEEecCCCCeEEEEEecC
Q 004987 591 KLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVN-KKIKVFECD--AIINENRDIHYPVVEMASRSKLSSICWNSY 667 (720)
Q Consensus 591 ~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d-~~i~iwd~~--~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~ 667 (720)
+++++..+.+ ...+.+++|+|||++|++++.+ ++|++||+. +.. ...+..+.....+.+++|+|+
T Consensus 27 ~~~~~~~~~~------~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~s~d 94 (343)
T 1ri6_A 27 ALTLTQVVDV------PGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGA------LTFAAESALPGSLTHISTDHQ 94 (343)
T ss_dssp CEEEEEEEEC------SSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCC------EEEEEEEECSSCCSEEEECTT
T ss_pred cEEEeeeEec------CCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCc------eeeccccccCCCCcEEEEcCC
Confidence 4455555544 5678899999999998888887 999999986 221 012334444447899999996
Q ss_pred CCCEEEEEe-CCCcEEEEEC---CCCcEEEE------EEEEeecCCce
Q 004987 668 IKSQIASSN-FEGVVQVGQV---LHLIYFSA------LYCIVLNKLLI 705 (720)
Q Consensus 668 ~~~~laS~s-~D~~v~lWD~---~tg~~~~~------~~~v~~~~~~~ 705 (720)
+ ++|+.++ .|++|.+||+ .+++.+.. +.+++|++...
T Consensus 95 g-~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~ 141 (343)
T 1ri6_A 95 G-QFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNR 141 (343)
T ss_dssp S-SEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSS
T ss_pred C-CEEEEEecCCCeEEEEECCCCccccccccccCCCCceEEEECCCCC
Confidence 5 5565554 5899999999 44444444 56788888765
No 390
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.21 E-value=3.6e-06 Score=98.76 Aligned_cols=107 Identities=7% Similarity=-0.037 Sum_probs=75.4
Q ss_pred CCCeEEEEECCCCCEEEEeeC-CC-----cEEEeeCCcccccc-cccccce-------------EE---ecCCCCeEEEE
Q 004987 607 SNLVCSLSFDRDGELFAAAGV-NK-----KIKVFECDAIINEN-RDIHYPV-------------VE---MASRSKLSSIC 663 (720)
Q Consensus 607 ~~~V~sv~f~~dg~~lat~~~-d~-----~i~iwd~~~~~~~~-~~~~~~~-------------~~---~~~~~~i~~l~ 663 (720)
...|.+++|+|||++||+++. |+ +|++||+.++.... ...+... .+ +.+...|.+++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 467899999999999999998 88 99999987752110 0000000 00 00002378999
Q ss_pred EecCCCCEEEEEeCCCcEEEEECCCC---cEEE------EEEEEeecCCceEEEecCccce
Q 004987 664 WNSYIKSQIASSNFEGVVQVGQVLHL---IYFS------ALYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 664 ~~~~~~~~laS~s~D~~v~lWD~~tg---~~~~------~~~~v~~~~~~~~~~~~~~~~~ 715 (720)
|+|+ +.+||+++. ++|.+||+.++ +... .+.+++|+|.+..+.+.+-+.|
T Consensus 116 ~SpD-g~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~~~i 174 (741)
T 2ecf_A 116 WSPD-AQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRGRNL 174 (741)
T ss_dssp ECTT-SSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEETTEE
T ss_pred ECCC-CCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeCCcE
Confidence 9995 568888885 99999999998 4332 1789999999988777665444
No 391
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.20 E-value=2.8e-06 Score=86.14 Aligned_cols=103 Identities=9% Similarity=-0.077 Sum_probs=74.4
Q ss_pred CCCCCCCeEEEEECCCCCEEEEee-CCCcEEEeeCCcccccccccccceEEec-CCCCeEEEEEecCCCCEEEEEeCC--
Q 004987 603 LLNSSNLVCSLSFDRDGELFAAAG-VNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFE-- 678 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~l~~~~~~~~~laS~s~D-- 678 (720)
+..+...+.+++|+|||++|+.++ .|+.++||++.... ..+..+. +...+.+++|+|+ +.+||.++.|
T Consensus 168 ~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~-------~~~~~~~~~~~~~~~~~~s~d-g~~l~~~~~~~~ 239 (297)
T 2ojh_A 168 LTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDG-------SSVERITDSAYGDWFPHPSPS-GDKVVFVSYDAD 239 (297)
T ss_dssp CCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTS-------SCEEECCCCSEEEEEEEECTT-SSEEEEEEEETT
T ss_pred cccCCCccccceECCCCCEEEEEecCCCCccEEEECCCC-------CCcEEEecCCcccCCeEECCC-CCEEEEEEcCCC
Confidence 445578899999999999877666 59999999975321 1222332 2456899999995 5678877766
Q ss_pred ---------CcEEEEECCCCcEE--EE-------EEEEeecCCceEEEecCcc
Q 004987 679 ---------GVVQVGQVLHLIYF--SA-------LYCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 679 ---------~~v~lWD~~tg~~~--~~-------~~~v~~~~~~~~~~~~~~~ 713 (720)
+.|.+||+.+++.. .. ++++.|++....+..++-+
T Consensus 240 ~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~ 292 (297)
T 2ojh_A 240 VFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYF 292 (297)
T ss_dssp CCSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEEC
T ss_pred CCcccccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEec
Confidence 56999999998653 22 5678899888777666544
No 392
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.20 E-value=7.8e-06 Score=82.73 Aligned_cols=98 Identities=9% Similarity=-0.017 Sum_probs=71.1
Q ss_pred CCeEEEEECCCCCEEE-EeeCCCcEEEeeCCcccccccccccceEEe-cCCCCeEEEEEecCCCCEEE-EEeCCCcEEEE
Q 004987 608 NLVCSLSFDRDGELFA-AAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIA-SSNFEGVVQVG 684 (720)
Q Consensus 608 ~~V~sv~f~~dg~~la-t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~~~~~~~~~la-S~s~D~~v~lW 684 (720)
..+.+++|+|||++|+ +++.|++++||++..... ....+ .+...+.+++|+|++ .+|+ +++.|+.++||
T Consensus 129 ~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~-------~~~~~~~~~~~~~~~~~s~dg-~~l~~~~~~~~~~~i~ 200 (297)
T 2ojh_A 129 LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSG-------VETRLTHGEGRNDGPDYSPDG-RWIYFNSSRTGQMQIW 200 (297)
T ss_dssp SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTC-------CEEECCCSSSCEEEEEECTTS-SEEEEEECTTSSCEEE
T ss_pred CCccceEECCCCCEEEEEECCCCceEEEEEECCCC-------cceEcccCCCccccceECCCC-CEEEEEecCCCCccEE
Confidence 3489999999999877 888999999999643211 12222 335679999999965 4555 55569999999
Q ss_pred ECC-CCcEEEE-------EEEEeecCCceEEEecCcc
Q 004987 685 QVL-HLIYFSA-------LYCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 685 D~~-tg~~~~~-------~~~v~~~~~~~~~~~~~~~ 713 (720)
++. .+..+.. ++++.|++....+..++.+
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~ 237 (297)
T 2ojh_A 201 RVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYD 237 (297)
T ss_dssp EEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEE
T ss_pred EECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcC
Confidence 886 4444443 7889999988777666554
No 393
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=98.20 E-value=5.4e-06 Score=86.20 Aligned_cols=78 Identities=9% Similarity=-0.039 Sum_probs=63.6
Q ss_pred CCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCeEEEEEecCCCCEEEEEeCCCcEEEEEC
Q 004987 607 SNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQV 686 (720)
Q Consensus 607 ~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~laS~s~D~~v~lWD~ 686 (720)
...+.+++|+|||++++++ +++|.+||+.+. ..+..+.....+.+++|+|++ ++|++++.|++|++||+
T Consensus 240 ~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~--------~~~~~~~~~~~~~~~~~s~dg-~~l~~~~~~~~i~v~d~ 308 (337)
T 1pby_B 240 DVFYFSTAVNPAKTRAFGA--YNVLESFDLEKN--------ASIKRVPLPHSYYSVNVSTDG-STVWLGGALGDLAAYDA 308 (337)
T ss_dssp SSCEEEEEECTTSSEEEEE--ESEEEEEETTTT--------EEEEEEECSSCCCEEEECTTS-CEEEEESBSSEEEEEET
T ss_pred CCceeeEEECCCCCEEEEe--CCeEEEEECCCC--------cCcceecCCCceeeEEECCCC-CEEEEEcCCCcEEEEEC
Confidence 5678899999999999888 799999998765 233334344568899999964 57888889999999999
Q ss_pred CCCcEEEEE
Q 004987 687 LHLIYFSAL 695 (720)
Q Consensus 687 ~tg~~~~~~ 695 (720)
.+++.+.++
T Consensus 309 ~~~~~~~~~ 317 (337)
T 1pby_B 309 ETLEKKGQV 317 (337)
T ss_dssp TTCCEEEEE
T ss_pred cCCcEEEEE
Confidence 999988775
No 394
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=98.18 E-value=1.1e-06 Score=103.01 Aligned_cols=95 Identities=12% Similarity=0.140 Sum_probs=74.6
Q ss_pred CeEEEEECCCCCEEEEeeC---------CCcEEEeeCCcccccccccccceEEecCCCCeEEEEEecCCCCEEEEEeCCC
Q 004987 609 LVCSLSFDRDGELFAAAGV---------NKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEG 679 (720)
Q Consensus 609 ~V~sv~f~~dg~~lat~~~---------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~laS~s~D~ 679 (720)
.|.+++|||||++||+++. |++|+|||+.++.... ...+ ...+.+++|||++ ..||+++ |+
T Consensus 61 ~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~------~~~l--~~~~~~~~~SPDG-~~la~~~-~~ 130 (719)
T 1z68_A 61 NASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVR------GNEL--PRPIQYLCWSPVG-SKLAYVY-QN 130 (719)
T ss_dssp TCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECC------SSCC--CSSBCCEEECSST-TCEEEEE-TT
T ss_pred ceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCcccc------ceec--CcccccceECCCC-CEEEEEE-CC
Confidence 3889999999999999987 7999999988762100 0111 2458899999964 5788886 89
Q ss_pred cEEEEECCCCcEEEE--------E-----------------EEEeecCCceEEEecCcc
Q 004987 680 VVQVGQVLHLIYFSA--------L-----------------YCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 680 ~v~lWD~~tg~~~~~--------~-----------------~~v~~~~~~~~~~~~~~~ 713 (720)
+|++||+.+|++.+. + .+++|+|.+..+.+++.|
T Consensus 131 ~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d 189 (719)
T 1z68_A 131 NIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFN 189 (719)
T ss_dssp EEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEE
T ss_pred eEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEEC
Confidence 999999999887642 2 389999999999888876
No 395
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=98.16 E-value=2.2e-06 Score=97.88 Aligned_cols=94 Identities=12% Similarity=-0.072 Sum_probs=71.5
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCC--cEEEeeCCcccccccccccceEEec-CCCCeEEEE--------EecCCCCE
Q 004987 603 LLNSSNLVCSLSFDRDGELFAAAGVNK--KIKVFECDAIINENRDIHYPVVEMA-SRSKLSSIC--------WNSYIKSQ 671 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~--~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~l~--------~~~~~~~~ 671 (720)
+.+|.+.+.+++|+|||++||+++.++ +|++||+.++.. . .+. +...+..++ |+|++ .+
T Consensus 190 l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~--------~-~~~~~~~~~~~~~~~~~~~~~~spdg-~~ 259 (582)
T 3o4h_A 190 FDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSV--------E-DLELPSKDFSSYRPTAITWLGYLPDG-RL 259 (582)
T ss_dssp ECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCE--------E-ECCCSCSHHHHHCCSEEEEEEECTTS-CE
T ss_pred eecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcE--------E-EccCCCcChhhhhhccccceeEcCCC-cE
Confidence 345678899999999999999998999 999999877521 1 111 233455555 99977 89
Q ss_pred EEEEeCCCcEEEEECCCCcEEEE----EEEEeecCCceEEEe
Q 004987 672 IASSNFEGVVQVGQVLHLIYFSA----LYCIVLNKLLIIFRY 709 (720)
Q Consensus 672 laS~s~D~~v~lWD~~tg~~~~~----~~~v~~~~~~~~~~~ 709 (720)
+++++.|++++||++ |+++.+ +++++|+ ....+..
T Consensus 260 ~~~~~~~g~~~l~~~--g~~~~~~~~~v~~~~~s-dg~~l~~ 298 (582)
T 3o4h_A 260 AVVARREGRSAVFID--GERVEAPQGNHGRVVLW-RGKLVTS 298 (582)
T ss_dssp EEEEEETTEEEEEET--TEEECCCSSEEEEEEEE-TTEEEEE
T ss_pred EEEEEcCCcEEEEEE--CCeeccCCCceEEEEec-CCEEEEE
Confidence 999999999999999 876633 7888888 5554444
No 396
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.14 E-value=2.2e-06 Score=92.10 Aligned_cols=102 Identities=13% Similarity=0.155 Sum_probs=76.2
Q ss_pred eeehhhhcccCC--CCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH-
Q 004987 64 KHSDGVELTHGD--HLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS- 139 (720)
Q Consensus 64 ~~~e~~~L~~l~--HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs- 139 (720)
..+|..++..+. +..+.+++. ++.+.......|+|||| .|..|.+.. ...++..+...++.+++..|..||+
T Consensus 83 ~~~E~~~l~~L~~~~vpvP~~~~-~~~~~~~~g~~~~vme~v~G~~l~~~~---~~~l~~~~~~~~~~~l~~~La~LH~~ 158 (359)
T 3dxp_A 83 IEREYRVMDALAGTDVPVAKMYA-LCEDESVIGRAFYIMEFVSGRVLWDQS---LPGMSPAERTAIYDEMNRVIAAMHTV 158 (359)
T ss_dssp HHHHHHHHHHHTTSSSCCCCEEE-EECCTTTTSSCEEEEECCCCBCCCCTT---CTTCCHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHhhcCCCCCCcEEE-ECCCCCccCCeEEEEEecCCeecCCCc---cccCCHHHHHHHHHHHHHHHHHHhCC
Confidence 345666777665 344677777 55554433457899999 887764311 2237888999999999999999997
Q ss_pred ---------------------------------------------------------cCceeccCCCCcEEEccCCc--e
Q 004987 140 ---------------------------------------------------------QGIVVHNVRPSCFVMSSFNH--V 160 (720)
Q Consensus 140 ---------------------------------------------------------~gIvHrDLKP~NILl~~~~~--v 160 (720)
.+++|+|++|.|||++.++. +
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~ 238 (359)
T 3dxp_A 159 DYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVL 238 (359)
T ss_dssp CTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEE
T ss_pred CchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEE
Confidence 36899999999999997653 6
Q ss_pred EEeccCccc
Q 004987 161 SFIESASCS 169 (720)
Q Consensus 161 kliDfg~a~ 169 (720)
.++||+.+.
T Consensus 239 ~viDwe~a~ 247 (359)
T 3dxp_A 239 AVLDWELST 247 (359)
T ss_dssp EECCCTTCE
T ss_pred EEECccccc
Confidence 899999873
No 397
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=98.13 E-value=1.3e-05 Score=83.62 Aligned_cols=103 Identities=10% Similarity=-0.041 Sum_probs=71.5
Q ss_pred ceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEee-CCCcEEEeeCCcccccccccccceEEecCCCCeEEEEEecCCC
Q 004987 591 KLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAG-VNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIK 669 (720)
Q Consensus 591 ~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~ 669 (720)
+++.+..+.. ...+.+++|+|||++|++++ .+++|.+||+..+. ....+..+.....+.+++|+|++
T Consensus 73 ~~~~~~~~~~------~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~-----~~~~~~~~~~~~~~~~~~~s~dg- 140 (343)
T 1ri6_A 73 ALTFAAESAL------PGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGL-----PVGVVDVVEGLDGCHSANISPDN- 140 (343)
T ss_dssp CEEEEEEEEC------SSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTE-----EEEEEEEECCCTTBCCCEECTTS-
T ss_pred ceeecccccc------CCCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCc-----cccccccccCCCCceEEEECCCC-
Confidence 4555555543 23678999999999776655 48999999984210 01233444455679999999965
Q ss_pred CEEEEEe-CCCcEEEEECCC-CcEEE------------EEEEEeecCCce
Q 004987 670 SQIASSN-FEGVVQVGQVLH-LIYFS------------ALYCIVLNKLLI 705 (720)
Q Consensus 670 ~~laS~s-~D~~v~lWD~~t-g~~~~------------~~~~v~~~~~~~ 705 (720)
++|++++ .|++|.+||+.+ ++... .+.+++|++...
T Consensus 141 ~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~ 190 (343)
T 1ri6_A 141 RTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQ 190 (343)
T ss_dssp SEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSS
T ss_pred CEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCC
Confidence 4666666 899999999998 65421 156788988876
No 398
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=98.12 E-value=6.9e-06 Score=93.47 Aligned_cols=85 Identities=6% Similarity=-0.096 Sum_probs=69.7
Q ss_pred ECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCeEEEEEecCCCCEEEEEeCCCcEEEEEC--CCCcEE
Q 004987 615 FDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQV--LHLIYF 692 (720)
Q Consensus 615 f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~laS~s~D~~v~lWD~--~tg~~~ 692 (720)
|+|+|.++++++.|++|.|||..+. ..+..+.....+.+++|+|+ +.+|++++.|++|++||+ .|++++
T Consensus 145 ~~p~~~~~vs~~~d~~V~v~D~~t~--------~~~~~i~~g~~~~~v~~spd-g~~l~v~~~d~~V~v~D~~~~t~~~~ 215 (543)
T 1nir_A 145 LDLPNLFSVTLRDAGQIALVDGDSK--------KIVKVIDTGYAVHISRMSAS-GRYLLVIGRDARIDMIDLWAKEPTKV 215 (543)
T ss_dssp CCGGGEEEEEEGGGTEEEEEETTTC--------CEEEEEECSTTEEEEEECTT-SCEEEEEETTSEEEEEETTSSSCEEE
T ss_pred cCCCCEEEEEEcCCCeEEEEECCCc--------eEEEEEecCcccceEEECCC-CCEEEEECCCCeEEEEECcCCCCcEE
Confidence 8999999999999999999998776 23444543334899999995 569999999999999999 899988
Q ss_pred EE------EEEEeecC----CceEEE
Q 004987 693 SA------LYCIVLNK----LLIIFR 708 (720)
Q Consensus 693 ~~------~~~v~~~~----~~~~~~ 708 (720)
.+ .++++|++ ......
T Consensus 216 ~~i~~g~~p~~va~sp~~~~dg~~l~ 241 (543)
T 1nir_A 216 AEIKIGIEARSVESSKFKGYEDRYTI 241 (543)
T ss_dssp EEEECCSEEEEEEECCSTTCTTTEEE
T ss_pred EEEecCCCcceEEeCCCcCCCCCEEE
Confidence 87 57899998 654443
No 399
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=98.10 E-value=3.1e-05 Score=81.57 Aligned_cols=97 Identities=11% Similarity=-0.107 Sum_probs=68.7
Q ss_pred CCCeEEEEECCCCCEEEEee-CCCcEEEeeCCcccccccccccceEEecC----------CCCeEEEEEecCCCCEEEEE
Q 004987 607 SNLVCSLSFDRDGELFAAAG-VNKKIKVFECDAIINENRDIHYPVVEMAS----------RSKLSSICWNSYIKSQIASS 675 (720)
Q Consensus 607 ~~~V~sv~f~~dg~~lat~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~----------~~~i~~l~~~~~~~~~laS~ 675 (720)
...+..|+|+|||++|++++ .+++|++||+..... . .++..+.. ...+.+++|+|+++ +++++
T Consensus 85 ~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~-~----~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~ 158 (347)
T 3hfq_A 85 GTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGA-L----TLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVID 158 (347)
T ss_dssp SCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSC-E----EEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEE
T ss_pred CCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCC-e----eecceeecCCCCCCccccCCCceEEEECCCCc-EEEEe
Confidence 56789999999999888887 789999999853100 0 11222211 23488999999766 77787
Q ss_pred eCCCcEEEEECC-CCcEEEE----------EEEEeecCCce-EEEe
Q 004987 676 NFEGVVQVGQVL-HLIYFSA----------LYCIVLNKLLI-IFRY 709 (720)
Q Consensus 676 s~D~~v~lWD~~-tg~~~~~----------~~~v~~~~~~~-~~~~ 709 (720)
..+++|.+||+. +|+.... ...++|++... .+..
T Consensus 159 ~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~ 204 (347)
T 3hfq_A 159 LGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLA 204 (347)
T ss_dssp TTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEE
T ss_pred CCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEE
Confidence 789999999998 6654321 45678998876 4443
No 400
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=98.09 E-value=3.5e-06 Score=96.14 Aligned_cols=94 Identities=10% Similarity=-0.155 Sum_probs=71.5
Q ss_pred EEEEECCCCCEEEEeeCC----CcEEEeeCCcccccccccccceEEecCCCCeEEEEEecCCCCEEEEEeCCC--cEEEE
Q 004987 611 CSLSFDRDGELFAAAGVN----KKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEG--VVQVG 684 (720)
Q Consensus 611 ~sv~f~~dg~~lat~~~d----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~laS~s~D~--~v~lW 684 (720)
.+++|||||++||+++.| .+|++||+.++. ......+...+..++|+|+ +.+||+++.|+ +|.+|
T Consensus 153 ~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~--------~~~l~~~~~~~~~~~~SpD-G~~l~~~~~~~~~~i~~~ 223 (582)
T 3o4h_A 153 FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGG--------LRVFDSGEGSFSSASISPG-MKVTAGLETAREARLVTV 223 (582)
T ss_dssp CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCC--------CEEECCSSCEEEEEEECTT-SCEEEEEECSSCEEEEEE
T ss_pred ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCC--------ceEeecCCCccccceECCC-CCEEEEccCCCeeEEEEE
Confidence 799999999999998888 889999987662 1112233567899999995 46888999999 99999
Q ss_pred ECCCCcEEEE------EEEEe--------ecCCceEEEecCcc
Q 004987 685 QVLHLIYFSA------LYCIV--------LNKLLIIFRYGMFQ 713 (720)
Q Consensus 685 D~~tg~~~~~------~~~v~--------~~~~~~~~~~~~~~ 713 (720)
|+.+|+.... +.+++ |++.+.++..+.-+
T Consensus 224 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~ 266 (582)
T 3o4h_A 224 DPRDGSVEDLELPSKDFSSYRPTAITWLGYLPDGRLAVVARRE 266 (582)
T ss_dssp CTTTCCEEECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEET
T ss_pred cCCCCcEEEccCCCcChhhhhhccccceeEcCCCcEEEEEEcC
Confidence 9999987721 34556 88887555544433
No 401
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=98.08 E-value=1.7e-06 Score=101.10 Aligned_cols=98 Identities=8% Similarity=-0.038 Sum_probs=73.3
Q ss_pred CeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCC----CeEEEEEecCCCCEEEEEeCC------
Q 004987 609 LVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRS----KLSSICWNSYIKSQIASSNFE------ 678 (720)
Q Consensus 609 ~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~----~i~~l~~~~~~~~~laS~s~D------ 678 (720)
.+.+++|+|||+++++ +.|++|++||..++. ....+.++. .|.+++|||+ +.+||+++.|
T Consensus 18 ~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~--------~~~~~~~~~~~~~~v~~~~~SpD-g~~l~~~~~~~~~~~~ 87 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYR-EQKGTVRLWNVETNT--------STVLIEGKKIESLRAIRYEISPD-REYALFSYNVEPIYQH 87 (723)
T ss_dssp CCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCC--------CEEEECTTTTTTTTCSEEEECTT-SSEEEEEESCCCCSSS
T ss_pred cccccEEcCCCcEEEE-eCCCCEEEEECCCCc--------EEEEeccccccccccceEEECCC-CCEEEEEecCccceee
Confidence 4678999999998887 789999999987762 222333322 4999999995 5688988764
Q ss_pred ---CcEEEEECCCCcEEE--E-------EEEEeecCCceEEEecCccceE
Q 004987 679 ---GVVQVGQVLHLIYFS--A-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 679 ---~~v~lWD~~tg~~~~--~-------~~~v~~~~~~~~~~~~~~~~~~ 716 (720)
++|.|||+.+|++.. . +.+++|+|.+..+.+++-..+.
T Consensus 88 ~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~~~i~ 137 (723)
T 1xfd_A 88 SYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFENNIY 137 (723)
T ss_dssp CCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEETTEEE
T ss_pred cceeeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEECCeEE
Confidence 778899999998622 1 5678999998777776654443
No 402
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=98.07 E-value=4.7e-06 Score=97.35 Aligned_cols=97 Identities=8% Similarity=-0.104 Sum_probs=73.9
Q ss_pred CeEEEEECCCCCEEEEeeCC---------CcEEEeeCCcccccccccccceEEec-CCCCeEEEEEecCCCCEEEEEeCC
Q 004987 609 LVCSLSFDRDGELFAAAGVN---------KKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFE 678 (720)
Q Consensus 609 ~V~sv~f~~dg~~lat~~~d---------~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~l~~~~~~~~~laS~s~D 678 (720)
.|.+++|||||++||+++.+ ++|.|||+.++... ++.... +...+.+++|||+ +..||+++.
T Consensus 62 ~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~------~l~~~~~~~~~~~~~~~SPd-G~~la~~~~- 133 (723)
T 1xfd_A 62 RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQ------SLDPPEVSNAKLQYAGWGPK-GQQLIFIFE- 133 (723)
T ss_dssp TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCE------ECCCTTCCSCCCSBCCBCSS-TTCEEEEET-
T ss_pred ccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceE------eccCCccccccccccEECCC-CCEEEEEEC-
Confidence 58999999999999999875 67889998776210 111111 2334889999996 468888885
Q ss_pred CcEEEEECCCCcEEEE-------E------------------EEEeecCCceEEEecCcc
Q 004987 679 GVVQVGQVLHLIYFSA-------L------------------YCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 679 ~~v~lWD~~tg~~~~~-------~------------------~~v~~~~~~~~~~~~~~~ 713 (720)
++|.+||+.+|+..+. + .+++|+|.+..+.+.+.+
T Consensus 134 ~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~ 193 (723)
T 1xfd_A 134 NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAIN 193 (723)
T ss_dssp TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEE
T ss_pred CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEEC
Confidence 8999999999887653 1 579999999988887765
No 403
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=98.05 E-value=3.4e-05 Score=80.37 Aligned_cols=110 Identities=11% Similarity=0.025 Sum_probs=75.2
Q ss_pred ccccceEEeeeeccCCCCCCCCCeEEEEECCCCCE-EEEeeCCCc-EEEeeCCcccccccccccceEEecCCCCeEEEEE
Q 004987 587 LSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGEL-FAAAGVNKK-IKVFECDAIINENRDIHYPVVEMASRSKLSSICW 664 (720)
Q Consensus 587 ~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~-lat~~~d~~-i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~ 664 (720)
+...+.+++..+.. ...+.+++|+|||++ ++++..+++ |.+||+.... ...+.. ...+.......+++|
T Consensus 113 ~d~~~~~~~~~~~~------~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g-~~~~~~--~~~~~~~~~~~~~~~ 183 (331)
T 3u4y_A 113 YSFLKNKFISTIPI------PYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADG-VLFDTG--QEFISGGTRPFNITF 183 (331)
T ss_dssp EETTTTEEEEEEEC------CTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTC-CEEEEE--EEEECSSSSEEEEEE
T ss_pred EECCCCCeEEEEEC------CCCccceEECCCCCEEEEEecCCCceEEEEEECCCC-cEeecC--CccccCCCCccceEE
Confidence 34444555555553 345689999999985 555566688 9999987421 011110 122333456899999
Q ss_pred ecCCCCEEEEEeCCCcEEEEECCCCcE---EEE------EEEEeecCCce
Q 004987 665 NSYIKSQIASSNFEGVVQVGQVLHLIY---FSA------LYCIVLNKLLI 705 (720)
Q Consensus 665 ~~~~~~~laS~s~D~~v~lWD~~tg~~---~~~------~~~v~~~~~~~ 705 (720)
+|+++.+++++..+++|.+||+.+++. +.+ +.+++|++...
T Consensus 184 spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~ 233 (331)
T 3u4y_A 184 TPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTNNLPGTIVVSRDGS 233 (331)
T ss_dssp CTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECSSCCCCEEECTTSS
T ss_pred CCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCCCCCceEEECCCCC
Confidence 997654566777899999999999998 665 46788888876
No 404
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=98.05 E-value=2e-06 Score=100.63 Aligned_cols=96 Identities=5% Similarity=0.036 Sum_probs=71.9
Q ss_pred EEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCC----CeEEEEEecCCCCEEEEEeC---------
Q 004987 611 CSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRS----KLSSICWNSYIKSQIASSNF--------- 677 (720)
Q Consensus 611 ~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~----~i~~l~~~~~~~~~laS~s~--------- 677 (720)
.+++|+|||++++++ .|++|++||..++. +...+.++. .|.+++|||+ +++||+++.
T Consensus 19 ~~~~~s~dg~~~~~~-~d~~i~~~~~~~g~--------~~~~~~~~~~~~~~~~~~~~SpD-g~~la~~~~~~~~~~~s~ 88 (719)
T 1z68_A 19 FFPNWISGQEYLHQS-ADNNIVLYNIETGQ--------SYTILSNRTMKSVNASNYGLSPD-RQFVYLESDYSKLWRYSY 88 (719)
T ss_dssp CCCEESSSSEEEEEC-TTSCEEEEESSSCC--------EEEEECHHHHHTTTCSEEEECTT-SSEEEEEEEEEECSSSCE
T ss_pred CccEECCCCeEEEEc-CCCCEEEEEcCCCc--------EEEEEccccccccceeeEEECCC-CCeEEEEecCceeEEeec
Confidence 378999999877776 59999999987762 222222222 3899999995 568888875
Q ss_pred CCcEEEEECCCCcEE---E---EEEEEeecCCceEEEecCccceE
Q 004987 678 EGVVQVGQVLHLIYF---S---ALYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 678 D~~v~lWD~~tg~~~---~---~~~~v~~~~~~~~~~~~~~~~~~ 716 (720)
|++|+|||+.+|+.+ . .+.+++|+|.+..+.+..-..+.
T Consensus 89 ~~~i~~~d~~~g~~~~~~~l~~~~~~~~~SPDG~~la~~~~~~i~ 133 (719)
T 1z68_A 89 TATYYIYDLSNGEFVRGNELPRPIQYLCWSPVGSKLAYVYQNNIY 133 (719)
T ss_dssp EEEEEEEETTTTEECCSSCCCSSBCCEEECSSTTCEEEEETTEEE
T ss_pred ceEEEEEECCCCccccceecCcccccceECCCCCEEEEEECCeEE
Confidence 799999999999873 2 17889999999877776544443
No 405
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.05 E-value=4.9e-06 Score=97.06 Aligned_cols=106 Identities=12% Similarity=-0.025 Sum_probs=72.6
Q ss_pred CCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCc-----ccccc-cccccc-eEE-----ecCCCCeEEEEEecCCCCEEE
Q 004987 606 SSNLVCSLSFDRDGELFAAAGVNKKIKVFECDA-----IINEN-RDIHYP-VVE-----MASRSKLSSICWNSYIKSQIA 673 (720)
Q Consensus 606 ~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~-----~~~~~-~~~~~~-~~~-----~~~~~~i~~l~~~~~~~~~la 673 (720)
+...|.+++|+|||++||++ .|++|+|||+.+ +.... ...+.. +.. -.....+.+++|+|+ +.+||
T Consensus 119 ~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpD-g~~la 196 (706)
T 2z3z_A 119 TNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPK-GSCLA 196 (706)
T ss_dssp CTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTT-SSEEE
T ss_pred CcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCC-CCEEE
Confidence 45678899999999999995 689999999876 41110 000000 000 000112589999995 56888
Q ss_pred EEe---------------------------------CCCcEEEEECCCCcEEEE---------EEEEeecCCceEEEecC
Q 004987 674 SSN---------------------------------FEGVVQVGQVLHLIYFSA---------LYCIVLNKLLIIFRYGM 711 (720)
Q Consensus 674 S~s---------------------------------~D~~v~lWD~~tg~~~~~---------~~~v~~~~~~~~~~~~~ 711 (720)
+++ .+.+|.+||+.+|+.... +.+++|++....+..++
T Consensus 197 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~ 276 (706)
T 2z3z_A 197 FYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAE 276 (706)
T ss_dssp EEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEE
T ss_pred EEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEE
Confidence 887 347899999999986432 67999999988766655
Q ss_pred cc
Q 004987 712 FQ 713 (720)
Q Consensus 712 ~~ 713 (720)
.+
T Consensus 277 ~~ 278 (706)
T 2z3z_A 277 VN 278 (706)
T ss_dssp EC
T ss_pred eC
Confidence 44
No 406
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.04 E-value=7.8e-06 Score=95.87 Aligned_cols=98 Identities=5% Similarity=-0.079 Sum_probs=74.5
Q ss_pred CCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCeEEEEEecCCCCEEEEEeCCCcEEEEEC
Q 004987 608 NLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGVVQVGQV 686 (720)
Q Consensus 608 ~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~~~~~~~~~laS~s~D~~v~lWD~ 686 (720)
..|.+++|+|||++||+++. ++|++||+.+.... .+..+ .+...+.+++|+|+ +.+||+++ ++.|.+||+
T Consensus 109 ~~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~------~~~~l~~~~~~~~~~~~SPD-G~~la~~~-~~~i~~~d~ 179 (741)
T 2ecf_A 109 TGIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKA------AVRQLTHGEGFATDAKLSPK-GGFVSFIR-GRNLWVIDL 179 (741)
T ss_dssp EESCCCEECTTSSEEEEEET-TEEEEEESSSCSTT------SCCBCCCSSSCEEEEEECTT-SSEEEEEE-TTEEEEEET
T ss_pred cCcceeEECCCCCEEEEEeC-CcEEEEECCCCCcc------eEEEcccCCcccccccCCCC-CCEEEEEe-CCcEEEEec
Confidence 34789999999999999886 99999998765100 01111 23467999999995 56889887 579999999
Q ss_pred CCCcEEEE-----------------------EEEEeecCCceEEEecCccc
Q 004987 687 LHLIYFSA-----------------------LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 687 ~tg~~~~~-----------------------~~~v~~~~~~~~~~~~~~~~ 714 (720)
.+|+.... +.++.|+|.+..+.+.+.|.
T Consensus 180 ~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~ 230 (741)
T 2ecf_A 180 ASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDE 230 (741)
T ss_dssp TTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEEC
T ss_pred CCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcC
Confidence 99987653 26789999998887776653
No 407
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.03 E-value=1.5e-05 Score=83.27 Aligned_cols=78 Identities=5% Similarity=-0.054 Sum_probs=62.5
Q ss_pred CCCeEEEEECC-CCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCeEEEEEecCCCCEEEEEeCCCcEEEEE
Q 004987 607 SNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQ 685 (720)
Q Consensus 607 ~~~V~sv~f~~-dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~laS~s~D~~v~lWD 685 (720)
...+.+++|+| ||++++++ +++|.+||+.+.. .+..+.....+.+++|+|++ ++|++++.|++|+|||
T Consensus 254 ~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~--------~~~~~~~~~~~~~~~~s~dg-~~l~~~~~~~~v~v~d 322 (349)
T 1jmx_B 254 TELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRK--------LIKAANLDHTYYCVAFDKKG-DKLYLGGTFNDLAVFN 322 (349)
T ss_dssp SSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTE--------EEEEEECSSCCCEEEECSSS-SCEEEESBSSEEEEEE
T ss_pred CCcceeeEecCCCCCEEEEE--cCeEEEEECccCe--------EEEEEcCCCCccceEECCCC-CEEEEecCCCeEEEEe
Confidence 56789999999 99999888 8999999987751 23333334457899999965 4666678899999999
Q ss_pred CCCCcEEEEE
Q 004987 686 VLHLIYFSAL 695 (720)
Q Consensus 686 ~~tg~~~~~~ 695 (720)
+.+++.+.++
T Consensus 323 ~~~~~~~~~~ 332 (349)
T 1jmx_B 323 PDTLEKVKNI 332 (349)
T ss_dssp TTTTEEEEEE
T ss_pred ccccceeeee
Confidence 9999988775
No 408
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=98.02 E-value=1.5e-05 Score=82.88 Aligned_cols=105 Identities=9% Similarity=-0.021 Sum_probs=73.5
Q ss_pred cccceEEeeeeccCCCCCCCC-CeEEEEECCCCCE-EEEeeCCCcEEEeeCCcccccccccccceEEecCC------CCe
Q 004987 588 SFSKLRVKADLNQGDLLNSSN-LVCSLSFDRDGEL-FAAAGVNKKIKVFECDAIINENRDIHYPVVEMASR------SKL 659 (720)
Q Consensus 588 ~~~~~~~~~~l~~~~~~~~~~-~V~sv~f~~dg~~-lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~------~~i 659 (720)
...+.+++..+..+ +.. .+.+++|+|||++ +++++.+++|.+||+.+.. .+..+... ..+
T Consensus 17 d~~~~~~~~~~~~~----~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~--------~~~~~~~~~~~~~~~~~ 84 (337)
T 1pby_B 17 DTEKMAVDKVITIA----DAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGE--------TLGRIDLSTPEERVKSL 84 (337)
T ss_dssp ETTTTEEEEEEECT----TCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCC--------EEEEEECCBTTEEEECT
T ss_pred ECCCCcEEEEEEcC----CCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCC--------eEeeEEcCCcccccccc
Confidence 34455666666531 111 4788999999975 5777778999999987652 22222211 157
Q ss_pred EEEEEecCCCCEEEEEe------------CCCcEEEEECCCCcEEEE------EEEEeecCCce
Q 004987 660 SSICWNSYIKSQIASSN------------FEGVVQVGQVLHLIYFSA------LYCIVLNKLLI 705 (720)
Q Consensus 660 ~~l~~~~~~~~~laS~s------------~D~~v~lWD~~tg~~~~~------~~~v~~~~~~~ 705 (720)
.+++|+|++ .+|+.++ .|+.|.+||+.+++.+.. +.+++|++...
T Consensus 85 ~~~~~s~dg-~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~ 147 (337)
T 1pby_B 85 FGAALSPDG-KTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGS 147 (337)
T ss_dssp TCEEECTTS-SEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTSS
T ss_pred cceEECCCC-CEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCCcceeEECCCCC
Confidence 789999954 5777775 579999999999988776 45778887765
No 409
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=98.02 E-value=3.5e-05 Score=80.28 Aligned_cols=110 Identities=10% Similarity=0.055 Sum_probs=73.0
Q ss_pred hccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEee-CCCcEEEeeCCcccccccccccceEEecCCCC-eEEEE
Q 004987 586 YLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAG-VNKKIKVFECDAIINENRDIHYPVVEMASRSK-LSSIC 663 (720)
Q Consensus 586 ~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-i~~l~ 663 (720)
.+...+.+++..+.. +...+ +++|+|||+++++++ .+++|.+||..+.. .....+..... ..+++
T Consensus 24 ~~d~~~~~~~~~~~~-----~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~-------~~~~~~~~~~~~~~~~~ 90 (331)
T 3u4y_A 24 FFSTDTLEILNQITL-----GYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEP-------PKVVAIQEGQSSMADVD 90 (331)
T ss_dssp EEETTTCCEEEEEEC-----CCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSS-------CEEEEEEECSSCCCCEE
T ss_pred EEeCcccceeeeEEc-----cCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCc-------eeEEecccCCCCccceE
Confidence 333344555555542 13445 999999999655544 48999999987652 11333333333 44499
Q ss_pred EecCCCCEEEEEeCCC---cEEEEECCCCcEEEE------EEEEeecCCce-EEEe
Q 004987 664 WNSYIKSQIASSNFEG---VVQVGQVLHLIYFSA------LYCIVLNKLLI-IFRY 709 (720)
Q Consensus 664 ~~~~~~~~laS~s~D~---~v~lWD~~tg~~~~~------~~~v~~~~~~~-~~~~ 709 (720)
|+|+ +.+|+++..++ +|.+||+.+++.+.+ ..+++|++... .+..
T Consensus 91 ~s~d-g~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~ 145 (331)
T 3u4y_A 91 ITPD-DQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYDAVGIAISPNGNGLILI 145 (331)
T ss_dssp ECTT-SSEEEECCCSSSSCEEEEEETTTTEEEEEEECCTTEEEEEECTTSSCEEEE
T ss_pred ECCC-CCEEEEecCCCCcccEEEEECCCCCeEEEEECCCCccceEECCCCCEEEEE
Confidence 9995 46777555442 999999999998876 57899999875 4443
No 410
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=98.02 E-value=3.6e-05 Score=80.69 Aligned_cols=106 Identities=9% Similarity=0.021 Sum_probs=73.4
Q ss_pred cceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEe-eCCCcEEEeeCCcccccccccccceEEecCCCCeEEEEEecCC
Q 004987 590 SKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAA-GVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYI 668 (720)
Q Consensus 590 ~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~ 668 (720)
.+.+++..+..+. .++...+.+++|+|||++++.+ ..++.|.+||..+.. .+..+.... -.+++|+|++
T Consensus 214 ~~~~~~~~~~~~~-~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~--------~~~~~~~~~-~~~~~~s~dg 283 (353)
T 3vgz_A 214 ADNKILSRKKLLD-DGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGN--------ILAKVAAPE-SLAVLFNPAR 283 (353)
T ss_dssp TTTEEEEEEECCC-SSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCC--------EEEEEECSS-CCCEEEETTT
T ss_pred CCCeEEEEEEcCC-CCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCc--------EEEEEEcCC-CceEEECCCC
Confidence 3444555544211 2345678999999999965554 456999999987652 222222222 2579999976
Q ss_pred CCEEEEEeCCCcEEEEECCCCcEEEE------EEEEeecCCce
Q 004987 669 KSQIASSNFEGVVQVGQVLHLIYFSA------LYCIVLNKLLI 705 (720)
Q Consensus 669 ~~~laS~s~D~~v~lWD~~tg~~~~~------~~~v~~~~~~~ 705 (720)
+.++++...|++|.+||+.+++.+.. .++++|++...
T Consensus 284 ~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~ 326 (353)
T 3vgz_A 284 NEAYVTHRQAGKVSVIDAKSYKVVKTFDTPTHPNSLALSADGK 326 (353)
T ss_dssp TEEEEEETTTTEEEEEETTTTEEEEEEECCSEEEEEEECTTSC
T ss_pred CEEEEEECCCCeEEEEECCCCeEEEEEecCCCCCeEEEcCCCC
Confidence 54566666799999999999998876 68899988775
No 411
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=97.92 E-value=1.6e-05 Score=92.97 Aligned_cols=100 Identities=9% Similarity=-0.015 Sum_probs=72.9
Q ss_pred CCCCCeEEEEECCCCCEEE-----EeeCCCcEEEeeCCcccccccccccceEEecCCCCeEEEEEecCCCCEEEEEeCCC
Q 004987 605 NSSNLVCSLSFDRDGELFA-----AAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEG 679 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~~la-----t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~laS~s~D~ 679 (720)
+|...+.+++|||||++|| +|+.+.+|+|||+.++.... .. .+. ..+...++|+|++ ..|+.++.|.
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~-~~-----~~~-~~~~~~~~wspDg-~~l~~~~~d~ 189 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSK-VD-----VIE-GGKYATPKWTPDS-KGFYYEWLPT 189 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCS-SC-----CBS-CCTTCCCEECTTS-SEEEEEECCC
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcC-Cc-----ccC-cccccceEEecCC-CEEEEEEecC
Confidence 3456789999999999999 66777899999998763110 00 111 2223789999964 5899999988
Q ss_pred c-------------EEEEECCCCc----EEEE-------EEEEeecCCceEEEecCc
Q 004987 680 V-------------VQVGQVLHLI----YFSA-------LYCIVLNKLLIIFRYGMF 712 (720)
Q Consensus 680 ~-------------v~lWD~~tg~----~~~~-------~~~v~~~~~~~~~~~~~~ 712 (720)
+ |++||+.|++ .+.+ +.++.|++.+..+...+.
T Consensus 190 ~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~ 246 (695)
T 2bkl_A 190 DPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYIL 246 (695)
T ss_dssp CTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEE
T ss_pred CCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEe
Confidence 7 9999999987 4432 678999998866655443
No 412
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=97.91 E-value=0.0001 Score=77.13 Aligned_cols=103 Identities=9% Similarity=0.149 Sum_probs=73.9
Q ss_pred cceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-----CCCCeEEEEE
Q 004987 590 SKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-----SRSKLSSICW 664 (720)
Q Consensus 590 ~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-----~~~~i~~l~~ 664 (720)
.+.+++..+. .+...+.+++|+|||+++++++.++.|.+||..+.. .+..+. ....+.+++|
T Consensus 172 ~~~~~~~~~~-----~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~--------~~~~~~~~~~~~~~~~~~~~~ 238 (353)
T 3vgz_A 172 GNIKLKTAIQ-----NTGKMSTGLALDSEGKRLYTTNADGELITIDTADNK--------ILSRKKLLDDGKEHFFINISL 238 (353)
T ss_dssp TTTEEEEEEC-----CCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTE--------EEEEEECCCSSSCCCEEEEEE
T ss_pred CCCceEEEec-----CCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCe--------EEEEEEcCCCCCCcccceEEE
Confidence 3445555554 124568899999999999999999999999987652 121111 2345889999
Q ss_pred ecCCCCEEEEEeCCCcEEEEECCCCcEEEEE-----EEEeecCCce
Q 004987 665 NSYIKSQIASSNFEGVVQVGQVLHLIYFSAL-----YCIVLNKLLI 705 (720)
Q Consensus 665 ~~~~~~~laS~s~D~~v~lWD~~tg~~~~~~-----~~v~~~~~~~ 705 (720)
+|+++.+++++..++.|.+||+.+++.+..+ .+++|++...
T Consensus 239 s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~s~dg~ 284 (353)
T 3vgz_A 239 DTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPESLAVLFNPARN 284 (353)
T ss_dssp ETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSSCCCEEEETTTT
T ss_pred CCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCceEEECCCCC
Confidence 9976544455555699999999999988774 3677777765
No 413
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=97.87 E-value=9.9e-05 Score=79.98 Aligned_cols=90 Identities=4% Similarity=-0.027 Sum_probs=69.2
Q ss_pred CCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCeEEEEEecCCCCEEEEEeCCCcEEEEEC
Q 004987 607 SNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQV 686 (720)
Q Consensus 607 ~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~laS~s~D~~v~lWD~ 686 (720)
.. |..|+| ||.+|++| .++.|++||+.+..... ..-.+...|.++.|.+. .+|.++.||+|.+||+
T Consensus 88 p~-V~~l~f--d~~~L~v~-~~~~l~v~dv~sl~~~~-------~~~~~~~~v~~i~~~~p---~~av~~~dG~L~v~dl 153 (388)
T 1xip_A 88 PD-VIFVCF--HGDQVLVS-TRNALYSLDLEELSEFR-------TVTSFEKPVFQLKNVNN---TLVILNSVNDLSALDL 153 (388)
T ss_dssp TT-EEEEEE--ETTEEEEE-ESSEEEEEESSSTTCEE-------EEEECSSCEEEEEECSS---EEEEEETTSEEEEEET
T ss_pred CC-eeEEEE--CCCEEEEE-cCCcEEEEEchhhhccC-------ccceeecceeeEEecCC---CEEEEECCCCEEEEEc
Confidence 45 999999 99999998 89999999988764211 11122445788888763 3899999999999999
Q ss_pred CCCcEEEE---EEEEeecCCceEEEec
Q 004987 687 LHLIYFSA---LYCIVLNKLLIIFRYG 710 (720)
Q Consensus 687 ~tg~~~~~---~~~v~~~~~~~~~~~~ 710 (720)
.+++.... |.|++|++.+...+.+
T Consensus 154 ~~~~~~~~~~~Vs~v~WSpkG~~vg~~ 180 (388)
T 1xip_A 154 RTKSTKQLAQNVTSFDVTNSQLAVLLK 180 (388)
T ss_dssp TTCCEEEEEESEEEEEECSSEEEEEET
T ss_pred cCCccccccCCceEEEEcCCceEEEEc
Confidence 98876543 9999999998555443
No 414
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=97.85 E-value=2e-05 Score=92.91 Aligned_cols=120 Identities=11% Similarity=0.094 Sum_probs=81.4
Q ss_pred hhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCc---------EEEeeCCcccccccccccceEEecC
Q 004987 585 KYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKK---------IKVFECDAIINENRDIHYPVVEMAS 655 (720)
Q Consensus 585 ~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~---------i~iwd~~~~~~~~~~~~~~~~~~~~ 655 (720)
+.+...+-+....+....+........+++|||||++||.++.+++ +.|||+.++.... ...+
T Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~--------l~~~ 110 (740)
T 4a5s_A 39 LVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLIT--------EERI 110 (740)
T ss_dssp EEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECC--------SSCC
T ss_pred EEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEE--------cccC
Confidence 3344444443333443233333333456899999999999998754 5599998762111 1123
Q ss_pred CCCeEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE--------EE-----------------EEeecCCceEEEec
Q 004987 656 RSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA--------LY-----------------CIVLNKLLIIFRYG 710 (720)
Q Consensus 656 ~~~i~~l~~~~~~~~~laS~s~D~~v~lWD~~tg~~~~~--------~~-----------------~v~~~~~~~~~~~~ 710 (720)
...+..++|||++ +.||.++ |+.|.+||+.+|+..+- ++ .+.|||.+..+.+.
T Consensus 111 ~~~~~~~~~SPdG-~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~ 188 (740)
T 4a5s_A 111 PNNTQWVTWSPVG-HKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYA 188 (740)
T ss_dssp CTTEEEEEECSST-TCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEE
T ss_pred CCcceeeEECCCC-CEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEE
Confidence 5679999999964 5788885 79999999999886652 21 37899999999988
Q ss_pred Cccc
Q 004987 711 MFQE 714 (720)
Q Consensus 711 ~~~~ 714 (720)
++|+
T Consensus 189 ~~d~ 192 (740)
T 4a5s_A 189 QFND 192 (740)
T ss_dssp EEEC
T ss_pred EEcc
Confidence 7764
No 415
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=97.85 E-value=4.2e-05 Score=79.93 Aligned_cols=90 Identities=6% Similarity=-0.086 Sum_probs=67.8
Q ss_pred EEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCC--CeEEEEEecCCCCEEEEEeCCCcEEEEECCCC
Q 004987 612 SLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRS--KLSSICWNSYIKSQIASSNFEGVVQVGQVLHL 689 (720)
Q Consensus 612 sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~--~i~~l~~~~~~~~~laS~s~D~~v~lWD~~tg 689 (720)
.++|++++.++++++.+++|++||..+.. .+..+.... .+..++|+|+++.++++++.+++|.+||+.++
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~--------~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~ 75 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDT--------VYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTC 75 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTE--------EEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTT
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCc--------EEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCC
Confidence 45789999999999999999999987751 233333323 57899999976545667778999999999999
Q ss_pred cEEEEE-------------EEEeecCCceEEEe
Q 004987 690 IYFSAL-------------YCIVLNKLLIIFRY 709 (720)
Q Consensus 690 ~~~~~~-------------~~v~~~~~~~~~~~ 709 (720)
+.+..+ .+++|++....+..
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~ 108 (349)
T 1jmx_B 76 KNTFHANLSSVPGEVGRSMYSFAISPDGKEVYA 108 (349)
T ss_dssp EEEEEEESCCSTTEEEECSSCEEECTTSSEEEE
T ss_pred cEEEEEEcccccccccccccceEECCCCCEEEE
Confidence 887653 45688887654443
No 416
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=97.83 E-value=2.3e-05 Score=91.30 Aligned_cols=94 Identities=6% Similarity=-0.102 Sum_probs=71.9
Q ss_pred CCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCeEEEEEecCCCCEEEEEeCCCcEEEEECC
Q 004987 608 NLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVL 687 (720)
Q Consensus 608 ~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~laS~s~D~~v~lWD~~ 687 (720)
..|.+++|+|| .+++.+ .|++|+|||+.+.. +.....+...+.+++|+|+ ++.||++ .|++|.+||+.
T Consensus 82 ~~v~~~~~spd-~~~~~~-~~~~i~~~d~~~~~--------~~~l~~~~~~~~~~~~Spd-G~~la~~-~~~~i~v~~~~ 149 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLF-TQGGLVGFDMLARK--------VTYLFDTNEETASLDFSPV-GDRVAYV-RNHNLYIARGG 149 (706)
T ss_dssp CCCEEEEETTT-TEEEEE-ETTEEEEEETTTTE--------EEEEECCTTCCTTCEECTT-SSEEEEE-ETTEEEEEECB
T ss_pred cCceeEEECCC-CeEEEE-ECCEEEEEECCCCc--------eEEccCCcccccCCcCCCC-CCEEEEE-ECCeEEEEecC
Confidence 56999999999 555544 36999999987651 2222334567899999995 5688885 68999999999
Q ss_pred C-----CcEEEE-------E--------------EEEeecCCceEEEecCcc
Q 004987 688 H-----LIYFSA-------L--------------YCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 688 t-----g~~~~~-------~--------------~~v~~~~~~~~~~~~~~~ 713 (720)
+ |+..+. + .++.|+|.+..+.+.++|
T Consensus 150 ~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d 201 (706)
T 2z3z_A 150 KLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMD 201 (706)
T ss_dssp CTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEE
T ss_pred cccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEEC
Confidence 9 876652 3 688999999988888765
No 417
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=97.82 E-value=6.5e-06 Score=83.33 Aligned_cols=91 Identities=8% Similarity=0.009 Sum_probs=63.6
Q ss_pred eehhhhcccCCCCCc--eecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004987 65 HSDGVELTHGDHLRN--QGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 65 ~~e~~~L~~l~HpnI--V~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~g 141 (720)
.+|..++..+.+.+| .+++. +...+ ...+++||| .|.+|. ... .. ...++.+++..|..||+..
T Consensus 61 ~~E~~~l~~l~~~~~~vP~~~~-~~~~~---~~~~~v~e~i~G~~l~--~~~----~~---~~~~~~~l~~~l~~lh~~~ 127 (264)
T 1nd4_A 61 QDEAARLSWLATTGVPCAAVLD-VVTEA---GRDWLLLGEVPGQDLL--SSH----LA---PAEKVSIMADAMRRLHTLD 127 (264)
T ss_dssp HHHHHHHHHHHTTTCCBCCEEE-EEECS---SCEEEEEECCSSEETT--TSC----CC---HHHHHHHHHHHHHHHTTSC
T ss_pred hHHHHHHHHHHhCCCCCCeEEE-eccCC---CCCEEEEEecCCcccC--cCc----CC---HhHHHHHHHHHHHHHhCCC
Confidence 356666666654444 45666 33333 247999999 888884 211 22 2356778888888888743
Q ss_pred ----------------------------------------------------------ceeccCCCCcEEEccCCceEEe
Q 004987 142 ----------------------------------------------------------IVVHNVRPSCFVMSSFNHVSFI 163 (720)
Q Consensus 142 ----------------------------------------------------------IvHrDLKP~NILl~~~~~vkli 163 (720)
++|+|++|.|||++.++.+.++
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~li 207 (264)
T 1nd4_A 128 PATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFI 207 (264)
T ss_dssp GGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEEC
T ss_pred CCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEE
Confidence 9999999999999776556799
Q ss_pred ccCcc
Q 004987 164 ESASC 168 (720)
Q Consensus 164 Dfg~a 168 (720)
||+.+
T Consensus 208 D~~~a 212 (264)
T 1nd4_A 208 DCGRL 212 (264)
T ss_dssp CCTTC
T ss_pred cchhc
Confidence 99987
No 418
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=97.82 E-value=4.8e-05 Score=93.29 Aligned_cols=100 Identities=5% Similarity=-0.108 Sum_probs=79.0
Q ss_pred CCCCCC-CeEEEEECCCCCEEEEeeCCCcEE-EeeCCcccccccccccceEEecCCCCeEEEEEecCCCCEEEEEeCCCc
Q 004987 603 LLNSSN-LVCSLSFDRDGELFAAAGVNKKIK-VFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGV 680 (720)
Q Consensus 603 ~~~~~~-~V~sv~f~~dg~~lat~~~d~~i~-iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~laS~s~D~~ 680 (720)
+..|.. .|.+++|+ ||+.||+++.+..|. +||+.+.. +.....+...+.+++|+|+ +.+||+++.|++
T Consensus 332 ~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~--------~~~l~~~~~~~~~~~~SpD-G~~la~~~~~~~ 401 (1045)
T 1k32_A 332 VPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGK--------AEKFEENLGNVFAMGVDRN-GKFAVVANDRFE 401 (1045)
T ss_dssp CSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCC--------EEECCCCCCSEEEEEECTT-SSEEEEEETTSE
T ss_pred ccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCC--------ceEecCCccceeeeEECCC-CCEEEEECCCCe
Confidence 345566 89999999 999999999988888 99976541 1111133567999999995 569999999999
Q ss_pred EEEEECCCCcEEEE-------EEEEeecCCceEEEecCc
Q 004987 681 VQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMF 712 (720)
Q Consensus 681 v~lWD~~tg~~~~~-------~~~v~~~~~~~~~~~~~~ 712 (720)
|++||+.+|+.... +++++|+|.+..+.++..
T Consensus 402 v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~ 440 (1045)
T 1k32_A 402 IMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFP 440 (1045)
T ss_dssp EEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEE
T ss_pred EEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEec
Confidence 99999999987654 478999999887766554
No 419
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=97.81 E-value=0.00013 Score=77.31 Aligned_cols=100 Identities=16% Similarity=0.022 Sum_probs=66.8
Q ss_pred CCCeEEEEECCCCCEE-EEeeCCCcEEEeeCCcccc----c-cccc-ccceEEecCCCCeEEEEEecCCCCEEEEEe-CC
Q 004987 607 SNLVCSLSFDRDGELF-AAAGVNKKIKVFECDAIIN----E-NRDI-HYPVVEMASRSKLSSICWNSYIKSQIASSN-FE 678 (720)
Q Consensus 607 ~~~V~sv~f~~dg~~l-at~~~d~~i~iwd~~~~~~----~-~~~~-~~~~~~~~~~~~i~~l~~~~~~~~~laS~s-~D 678 (720)
...+.+++|+|||+++ +++..+++|+||++..... . .... ..+............++|+|++ .+|+.++ .+
T Consensus 154 ~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg-~~l~v~~~~~ 232 (361)
T 3scy_A 154 MPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDG-KFAYLINEIG 232 (361)
T ss_dssp SCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTS-SEEEEEETTT
T ss_pred CCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCC-CEEEEEcCCC
Confidence 4567999999999965 4555589999999865421 0 0000 0012233345568899999965 4665555 79
Q ss_pred CcEEEEECCCCcE--EEE----------EEEEeecCCceEE
Q 004987 679 GVVQVGQVLHLIY--FSA----------LYCIVLNKLLIIF 707 (720)
Q Consensus 679 ~~v~lWD~~tg~~--~~~----------~~~v~~~~~~~~~ 707 (720)
++|.+||+.+|+. +.+ ..+++|++....+
T Consensus 233 ~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l 273 (361)
T 3scy_A 233 GTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYL 273 (361)
T ss_dssp CEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEE
T ss_pred CeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEE
Confidence 9999999998864 222 3478899887643
No 420
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=97.80 E-value=0.00018 Score=75.61 Aligned_cols=81 Identities=9% Similarity=0.014 Sum_probs=58.4
Q ss_pred CCeEEEEECCCCCEE-EEeeCCCcEEEeeCCcccccccccccceEEecC-CCCeEEEEEecCCCCEEEEEeC-CCcEEEE
Q 004987 608 NLVCSLSFDRDGELF-AAAGVNKKIKVFECDAIINENRDIHYPVVEMAS-RSKLSSICWNSYIKSQIASSNF-EGVVQVG 684 (720)
Q Consensus 608 ~~V~sv~f~~dg~~l-at~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~i~~l~~~~~~~~~laS~s~-D~~v~lW 684 (720)
..+.+++|+|||++| +++..+++|.|||+.... . ...+..+.. ...+.+++|+|++ .+|++++. +++|.||
T Consensus 240 ~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g----~-~~~~~~~~~~~~~~~~~~~spdg-~~l~v~~~~~~~v~v~ 313 (347)
T 3hfq_A 240 NGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADG----H-LTLIQQISTEGDFPRDFDLDPTE-AFVVVVNQNTDNATLY 313 (347)
T ss_dssp CEEEEEEECTTSCEEEEEEETTTEEEEEEECGGG----C-EEEEEEEECSSSCCCEEEECTTS-SEEEEEETTTTEEEEE
T ss_pred CcceeEEECCCCCEEEEEeCCCCEEEEEEECCCC----c-EEEeEEEecCCCCcCeEEECCCC-CEEEEEEcCCCcEEEE
Confidence 568999999999976 677779999999986320 0 012333333 4458899999965 57777765 5999999
Q ss_pred --ECCCCcEEEE
Q 004987 685 --QVLHLIYFSA 694 (720)
Q Consensus 685 --D~~tg~~~~~ 694 (720)
|..+|+....
T Consensus 314 ~~d~~tg~l~~~ 325 (347)
T 3hfq_A 314 ARDLTSGKLSLL 325 (347)
T ss_dssp EECTTTCCEEEE
T ss_pred EEeCCCCeEEec
Confidence 7778886653
No 421
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=97.80 E-value=9.6e-05 Score=78.34 Aligned_cols=91 Identities=10% Similarity=0.051 Sum_probs=61.4
Q ss_pred CCCCeEEEEECCCCCEEEEeeC--CCcEEEeeCCcccccccccccceEEecCCCCeEEEEEecCCCCEEEEEe-CCCcEE
Q 004987 606 SSNLVCSLSFDRDGELFAAAGV--NKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSN-FEGVVQ 682 (720)
Q Consensus 606 ~~~~V~sv~f~~dg~~lat~~~--d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~laS~s-~D~~v~ 682 (720)
+...+.+++|+|||++|++++. +++|.|||+....... ..+..+.....+.+++|+|++ .+|++++ .+++|.
T Consensus 257 ~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~----~~~~~~~~g~~~~~~~~spdg-~~l~~~~~~~~~v~ 331 (361)
T 3scy_A 257 NAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTL----TKVGYQLTGIHPRNFIITPNG-KYLLVACRDTNVIQ 331 (361)
T ss_dssp CCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCE----EEEEEEECSSCCCEEEECTTS-CEEEEEETTTTEEE
T ss_pred CCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcE----EEeeEecCCCCCceEEECCCC-CEEEEEECCCCCEE
Confidence 3456789999999998755554 5899999985321100 123333334468899999965 5666666 789999
Q ss_pred EE--ECCCCcEEEE--------EEEEeec
Q 004987 683 VG--QVLHLIYFSA--------LYCIVLN 701 (720)
Q Consensus 683 lW--D~~tg~~~~~--------~~~v~~~ 701 (720)
|| |..+|+.... ..||.|.
T Consensus 332 v~~~d~~~g~~~~~~~~~~~~~p~~v~~~ 360 (361)
T 3scy_A 332 IFERDQATGLLTDIKKDIKVDKPVCLKFV 360 (361)
T ss_dssp EEEECTTTCCEEECSCCEECSSEEEEEEE
T ss_pred EEEEECCCCcEeecceeeeCCCCeEEEEc
Confidence 95 6678876543 5666664
No 422
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=97.79 E-value=5.5e-05 Score=88.65 Aligned_cols=96 Identities=15% Similarity=0.143 Sum_probs=70.3
Q ss_pred CCCeEEEEECCCCCEEEEeeCCC-----cEEEeeCCcccccccccccceEEecCCCCeEEEEEecCCCCEEEEEeCCCc-
Q 004987 607 SNLVCSLSFDRDGELFAAAGVNK-----KIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGV- 680 (720)
Q Consensus 607 ~~~V~sv~f~~dg~~lat~~~d~-----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~laS~s~D~~- 680 (720)
...+.+++|||||++||.++.++ +|+|||+.++. .+.......++..++|+|+ +..|+.++.|+.
T Consensus 124 ~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~--------~~~~~~~~~~~~~~~wspD-g~~l~~~~~~~~~ 194 (710)
T 2xdw_A 124 TVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAK--------ELPDVLERVKFSCMAWTHD-GKGMFYNAYPQQD 194 (710)
T ss_dssp CEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTE--------EEEEEEEEECSCCEEECTT-SSEEEEEECCCCS
T ss_pred CEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCC--------CCcccccCcccceEEEEeC-CCEEEEEEECCcc
Confidence 44688999999999999876654 99999998762 1111111234778999995 468888888877
Q ss_pred ---------------EEEEECCCCc----EEEE-------EEEEeecCCceEEEecC
Q 004987 681 ---------------VQVGQVLHLI----YFSA-------LYCIVLNKLLIIFRYGM 711 (720)
Q Consensus 681 ---------------v~lWD~~tg~----~~~~-------~~~v~~~~~~~~~~~~~ 711 (720)
|.+||+.+++ .+.+ +.++.|++....+...+
T Consensus 195 ~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~ 251 (710)
T 2xdw_A 195 GKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSI 251 (710)
T ss_dssp SCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEE
T ss_pred ccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEE
Confidence 9999999987 3322 56889999887665544
No 423
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=97.73 E-value=3.5e-05 Score=90.78 Aligned_cols=92 Identities=11% Similarity=0.034 Sum_probs=68.6
Q ss_pred CeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCC------CeEEEEEecCCCCEEEEEeCC----
Q 004987 609 LVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRS------KLSSICWNSYIKSQIASSNFE---- 678 (720)
Q Consensus 609 ~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~------~i~~l~~~~~~~~~laS~s~D---- 678 (720)
...+++|+|||++|+++ |++|++||+.++. ....+.++. ....++|||+ +.+||+++.|
T Consensus 18 ~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~Spd-g~~l~~~~~~~~~~ 86 (740)
T 4a5s_A 18 KLYSLRWISDHEYLYKQ--ENNILVFNAEYGN--------SSVFLENSTFDEFGHSINDYSISPD-GQFILLEYNYVKQW 86 (740)
T ss_dssp CCCCEEECSSSEEEEEE--TTEEEEEETTTCC--------EEEEECTTTTTTCCSCCCEEEECTT-SSEEEEEEEEEECS
T ss_pred cccccEECCCCcEEEEc--CCcEEEEECCCCc--------eEEEEechhhhhhcccccceEECCC-CCEEEEEECCeeeE
Confidence 35689999999999997 9999999998762 122222211 1245899995 5688888877
Q ss_pred -----CcEEEEECCCCcEEEE------EEEEeecCCceEEEecC
Q 004987 679 -----GVVQVGQVLHLIYFSA------LYCIVLNKLLIIFRYGM 711 (720)
Q Consensus 679 -----~~v~lWD~~tg~~~~~------~~~v~~~~~~~~~~~~~ 711 (720)
+.+.|||+.+|++..- +..++|||.+..+.+.+
T Consensus 87 r~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~~~SPdG~~la~~~ 130 (740)
T 4a5s_A 87 RHSYTASYDIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVW 130 (740)
T ss_dssp SSCEEEEEEEEETTTTEECCSSCCCTTEEEEEECSSTTCEEEEE
T ss_pred EEccceEEEEEECCCCcEEEcccCCCcceeeEECCCCCEEEEEE
Confidence 4556999999986542 78999999988777764
No 424
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=97.71 E-value=7.8e-05 Score=86.13 Aligned_cols=98 Identities=3% Similarity=-0.208 Sum_probs=70.9
Q ss_pred CCCCeEEEEECCCCCEEEEeeCC----------CcEEEeeCCc------ccccccccccceEEe-cCCCCeEEEEEecCC
Q 004987 606 SSNLVCSLSFDRDGELFAAAGVN----------KKIKVFECDA------IINENRDIHYPVVEM-ASRSKLSSICWNSYI 668 (720)
Q Consensus 606 ~~~~V~sv~f~~dg~~lat~~~d----------~~i~iwd~~~------~~~~~~~~~~~~~~~-~~~~~i~~l~~~~~~ 668 (720)
|...+.+++|+|||+.||+++.| .+|++||+.+ .. +.... .+...+..++|||+
T Consensus 128 ~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~--------~~~l~~~~~~~~~~~~~SpD- 198 (662)
T 3azo_A 128 GGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSA--------VRELSDDAHRFVTGPRLSPD- 198 (662)
T ss_dssp TCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGG--------SEESSCSCSSEECCCEECTT-
T ss_pred CCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCc--------eeEEEecCCCcccCceECCC-
Confidence 56788999999999999999887 6899999876 31 11111 23456888999995
Q ss_pred CCEEEEEeCCC--------cEEEEECC-CC---cEEEE-------EEEEeecCCceEEEecCc
Q 004987 669 KSQIASSNFEG--------VVQVGQVL-HL---IYFSA-------LYCIVLNKLLIIFRYGMF 712 (720)
Q Consensus 669 ~~~laS~s~D~--------~v~lWD~~-tg---~~~~~-------~~~v~~~~~~~~~~~~~~ 712 (720)
+.+||.++.|+ +|.+||+. +| +.... ++++.|++.+.++..+.-
T Consensus 199 G~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~ 261 (662)
T 3azo_A 199 GRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDR 261 (662)
T ss_dssp SSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECT
T ss_pred CCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECC
Confidence 56888777553 79999999 67 33221 678899988765544433
No 425
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=97.56 E-value=0.00034 Score=73.30 Aligned_cols=92 Identities=13% Similarity=0.094 Sum_probs=62.9
Q ss_pred CCeEEEEECCCCCEEEEeeCC---Cc--EEEeeCCcccccccccccceEEecCCCCeEEEEEecCCCCEEEEEeCC----
Q 004987 608 NLVCSLSFDRDGELFAAAGVN---KK--IKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFE---- 678 (720)
Q Consensus 608 ~~V~sv~f~~dg~~lat~~~d---~~--i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~laS~s~D---- 678 (720)
..+.+++|+|||++||.++.+ +. |.+||+.++. +........ +.+++|+|++ ..||.++.+
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~--------~~~l~~~~~-~~~~~wspdg-~~l~~~~~~~~~~ 128 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLS--------SKKILEAKN-IRSLEWNEDS-RKLLIVGFKRRED 128 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTE--------EEEEEEESE-EEEEEECTTS-SEEEEEEECCCC-
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCc--------eEEEEcCCC-ccceeECCCC-CEEEEEEccCCCc
Confidence 347889999999999988765 33 7777876541 111122233 9999999965 577766532
Q ss_pred -----------------------CcEEEEECCCCcEEEEE-----EEEeecCCceEEEec
Q 004987 679 -----------------------GVVQVGQVLHLIYFSAL-----YCIVLNKLLIIFRYG 710 (720)
Q Consensus 679 -----------------------~~v~lWD~~tg~~~~~~-----~~v~~~~~~~~~~~~ 710 (720)
..|.+||+.+|+.+..+ .++.|++.. +...+
T Consensus 129 ~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~spdg-~~~~~ 187 (347)
T 2gop_A 129 EDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEKPRFSSGIWHRDK-IVVNV 187 (347)
T ss_dssp --------CCCC---------CEEEEEEEETTTTEEEEEEEEETTCEEEEETTE-EEEEE
T ss_pred CCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecCCCcccccCCCCe-EEEEE
Confidence 57999999999874443 467888877 44333
No 426
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=97.49 E-value=0.00049 Score=73.63 Aligned_cols=81 Identities=11% Similarity=0.086 Sum_probs=60.1
Q ss_pred EEECCCCCEEEEeeC-----------CCcEEEeeCCcccccccccccceEEecCCCCeEEEEEecCCCCEEEEEeCCCcE
Q 004987 613 LSFDRDGELFAAAGV-----------NKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 613 v~f~~dg~~lat~~~-----------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~laS~s~D~~v 681 (720)
++|+|||..+..+.. +.+|.+||+.+. ..+..+.... ..+++|+|+++ +|++++. ++|
T Consensus 259 ~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~--------~~v~~i~~~~-p~~ia~spdg~-~l~v~n~-~~v 327 (361)
T 2oiz_A 259 VGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTK--------QRVARIPGRD-ALSMTIDQQRN-LMLTLDG-GNV 327 (361)
T ss_dssp EEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTT--------EEEEEEECTT-CCEEEEETTTT-EEEEECS-SCE
T ss_pred EEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCC--------cEEEEEecCC-eeEEEECCCCC-EEEEeCC-CeE
Confidence 689999876444322 458999998776 2344454444 89999999654 8888886 999
Q ss_pred EEEECCCC--cEEEEE-------EEEeecCCc
Q 004987 682 QVGQVLHL--IYFSAL-------YCIVLNKLL 704 (720)
Q Consensus 682 ~lWD~~tg--~~~~~~-------~~v~~~~~~ 704 (720)
.|||+.|+ +.+.++ +.++|+|.+
T Consensus 328 ~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~G 359 (361)
T 2oiz_A 328 NVYDISQPEPKLLRTIEGAAEASLQVQFHPVG 359 (361)
T ss_dssp EEEECSSSSCEEEEEETTSCSSEEEEEECCCS
T ss_pred EEEECCCCcceeeEEeccCCCCcEEEEecCCC
Confidence 99999999 988874 556666543
No 427
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=97.45 E-value=0.0015 Score=68.50 Aligned_cols=97 Identities=14% Similarity=0.146 Sum_probs=72.1
Q ss_pred CCCCCeEEEEECC-CCCEEEEee-CCCcEEEeeCCcccccccccccceEEecC-----------CCCeEEEEEecCCCCE
Q 004987 605 NSSNLVCSLSFDR-DGELFAAAG-VNKKIKVFECDAIINENRDIHYPVVEMAS-----------RSKLSSICWNSYIKSQ 671 (720)
Q Consensus 605 ~~~~~V~sv~f~~-dg~~lat~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-----------~~~i~~l~~~~~~~~~ 671 (720)
++-+..++|+|+| +|.++++.+ .+++|++||.... .+..+.. -.....|+++|+.+.+
T Consensus 140 ~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~g~---------~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l 210 (329)
T 3fvz_A 140 NHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPSGK---------FVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQL 210 (329)
T ss_dssp TCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTTSC---------EEEEECEECCSSSCCTTEESCEEEEEEETTTTEE
T ss_pred cccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCCCC---------EEEEeccCCCCCCCCCcccCCCcEEEEECCCCEE
Confidence 4456789999999 899999987 7999999994322 1111111 1237899999975778
Q ss_pred EEEEeCCCcEEEEECCCCcEEEE---------EEEEeecCCceEEEec
Q 004987 672 IASSNFEGVVQVGQVLHLIYFSA---------LYCIVLNKLLIIFRYG 710 (720)
Q Consensus 672 laS~s~D~~v~lWD~~tg~~~~~---------~~~v~~~~~~~~~~~~ 710 (720)
+++...+++|++||..+|+.+.+ +++++|+|......+|
T Consensus 211 ~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g 258 (329)
T 3fvz_A 211 CVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNG 258 (329)
T ss_dssp EEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEEC
T ss_pred EEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCC
Confidence 88888899999999999998876 5788888844444444
No 428
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=97.45 E-value=0.0011 Score=70.67 Aligned_cols=79 Identities=6% Similarity=-0.102 Sum_probs=56.3
Q ss_pred CCCCeEEEEECCCCCEEEEeeC-CCcEEEeeCC-cccccccccccceEEec---CCCCeEEEEEecCCCCEEEEEe-CCC
Q 004987 606 SSNLVCSLSFDRDGELFAAAGV-NKKIKVFECD-AIINENRDIHYPVVEMA---SRSKLSSICWNSYIKSQIASSN-FEG 679 (720)
Q Consensus 606 ~~~~V~sv~f~~dg~~lat~~~-d~~i~iwd~~-~~~~~~~~~~~~~~~~~---~~~~i~~l~~~~~~~~~laS~s-~D~ 679 (720)
+...+.+++|+|||++|++++. +.+|++||+. ++.. .++..+. +...+..++|+|++ .+|+.++ .++
T Consensus 143 ~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~------~~~~~~~~~~~g~~p~~~~~spdg-~~l~v~~~~~~ 215 (365)
T 1jof_A 143 ENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEV------ELVGSVDAPDPGDHPRWVAMHPTG-NYLYALMEAGN 215 (365)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCE------EEEEEEECSSTTCCEEEEEECTTS-SEEEEEETTTT
T ss_pred CCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCE------EEeeeEecCCCCCCCCEeEECCCC-CEEEEEECCCC
Confidence 4577999999999998877654 6899999987 4310 1122222 24568999999965 5776666 479
Q ss_pred cEEEEECC--CCcE
Q 004987 680 VVQVGQVL--HLIY 691 (720)
Q Consensus 680 ~v~lWD~~--tg~~ 691 (720)
+|.+|++. +|+.
T Consensus 216 ~v~v~~~~~~~g~~ 229 (365)
T 1jof_A 216 RICEYVIDPATHMP 229 (365)
T ss_dssp EEEEEEECTTTCCE
T ss_pred eEEEEEEeCCCCcE
Confidence 99999764 6764
No 429
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=97.42 E-value=0.00023 Score=75.76 Aligned_cols=73 Identities=8% Similarity=-0.004 Sum_probs=53.9
Q ss_pred EEEECCCCCEEEEeeC-CCc--EEEeeCCcccccccccccceEEecC-CCCeEEEEEecCCCCEEEEEeCCCcEEEEECC
Q 004987 612 SLSFDRDGELFAAAGV-NKK--IKVFECDAIINENRDIHYPVVEMAS-RSKLSSICWNSYIKSQIASSNFEGVVQVGQVL 687 (720)
Q Consensus 612 sv~f~~dg~~lat~~~-d~~--i~iwd~~~~~~~~~~~~~~~~~~~~-~~~i~~l~~~~~~~~~laS~s~D~~v~lWD~~ 687 (720)
..+|+|||++||.++. +++ |.+||+.++. +.....+ ...+..++|+|+ +..||.++.|+.|.+||+.
T Consensus 40 ~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~--------~~~lt~~~~~~~~~~~~spd-g~~l~~~~~~~~l~~~d~~ 110 (388)
T 3pe7_A 40 QKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQV--------ATQLTEGRGDNTFGGFLSPD-DDALFYVKDGRNLMRVDLA 110 (388)
T ss_dssp SCCBCTTSCEEEEEECTTSSCEEEEEETTTCE--------EEECCCSSCBCSSSCEECTT-SSEEEEEETTTEEEEEETT
T ss_pred CccCCCCCCEEEEEEcCCCCceEEEEeCCCCc--------eEEeeeCCCCCccceEEcCC-CCEEEEEeCCCeEEEEECC
Confidence 3889999999999988 664 8888877652 1111112 223446789995 5689999999999999999
Q ss_pred CCcEEE
Q 004987 688 HLIYFS 693 (720)
Q Consensus 688 tg~~~~ 693 (720)
+|+...
T Consensus 111 ~g~~~~ 116 (388)
T 3pe7_A 111 TLEENV 116 (388)
T ss_dssp TCCEEE
T ss_pred CCccee
Confidence 998654
No 430
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=97.34 E-value=0.0026 Score=64.73 Aligned_cols=93 Identities=12% Similarity=0.090 Sum_probs=70.6
Q ss_pred CCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecC---CCCeEEEEEecCCCCEEEEEeCCC-cEE
Q 004987 607 SNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS---RSKLSSICWNSYIKSQIASSNFEG-VVQ 682 (720)
Q Consensus 607 ~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~---~~~i~~l~~~~~~~~~laS~s~D~-~v~ 682 (720)
...+.+|+|+++|.++++.+.+++|++||.... .+..+.. -..+..|+++|+ ++++++...++ .|.
T Consensus 163 ~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g~---------~~~~~~~~g~~~~p~~i~~d~~-G~l~v~~~~~~~~i~ 232 (286)
T 1q7f_A 163 LEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQ---------YLRQIGGEGITNYPIGVGINSN-GEILIADNHNNFNLT 232 (286)
T ss_dssp CSSEEEEEECSSSEEEEEEGGGTEEEEEETTCC---------EEEEESCTTTSCSEEEEEECTT-CCEEEEECSSSCEEE
T ss_pred cCCcEEEEECCCCCEEEEECCCCEEEEEcCCCC---------EEEEEccCCccCCCcEEEECCC-CCEEEEeCCCCEEEE
Confidence 457899999999999999889999999996432 1222322 246889999995 47888887776 999
Q ss_pred EEECCCCcEEEE---------EEEEeecCCceEEEec
Q 004987 683 VGQVLHLIYFSA---------LYCIVLNKLLIIFRYG 710 (720)
Q Consensus 683 lWD~~tg~~~~~---------~~~v~~~~~~~~~~~~ 710 (720)
+||. +|+.+.+ .+++++++....+..+
T Consensus 233 ~~~~-~g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs~ 268 (286)
T 1q7f_A 233 IFTQ-DGQLISALESKVKHAQCFDVALMDDGSVVLAS 268 (286)
T ss_dssp EECT-TSCEEEEEEESSCCSCEEEEEEETTTEEEEEE
T ss_pred EECC-CCCEEEEEcccCCCCcceeEEECCCCcEEEEC
Confidence 9995 5666655 4578888887777764
No 431
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=97.31 E-value=0.0021 Score=66.95 Aligned_cols=97 Identities=11% Similarity=0.008 Sum_probs=72.2
Q ss_pred CCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCeEEEEEecCCCCEEEEEeCC----Cc
Q 004987 606 SSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFE----GV 680 (720)
Q Consensus 606 ~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~~~~~~~~~laS~s~D----~~ 680 (720)
+...+.+++|+|||++++++..++.|.+||..+.. ..... .....+.+++|+|++ .+++++..+ +.
T Consensus 43 ~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~--------~~~~~~~~~~~~~~i~~~~dg-~l~v~~~~~~~~~~~ 113 (333)
T 2dg1_A 43 KGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKE--------IKRPFVSHKANPAAIKIHKDG-RLFVCYLGDFKSTGG 113 (333)
T ss_dssp SCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCC--------EEEEEECSSSSEEEEEECTTS-CEEEEECTTSSSCCE
T ss_pred cCccccCcEECCCCCEEEEECCCCEEEEEeCCCCc--------EEEEeeCCCCCcceEEECCCC-cEEEEeCCCCCCCce
Confidence 35678999999999999999999999999987651 11111 234679999999964 577777666 68
Q ss_pred EEEEECCCCcEEE---------EEEEEeecCCceEEEecC
Q 004987 681 VQVGQVLHLIYFS---------ALYCIVLNKLLIIFRYGM 711 (720)
Q Consensus 681 v~lWD~~tg~~~~---------~~~~v~~~~~~~~~~~~~ 711 (720)
|.+||..+++... .++++.+++...+...++
T Consensus 114 i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~ 153 (333)
T 2dg1_A 114 IFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDF 153 (333)
T ss_dssp EEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEEC
T ss_pred EEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEec
Confidence 9999998887532 167888888776666544
No 432
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=97.28 E-value=0.00042 Score=81.62 Aligned_cols=94 Identities=14% Similarity=0.061 Sum_probs=67.0
Q ss_pred CCeEEEEECCCCCEEEEeeCC-----CcEEEeeCCcccccccccccceEEecCCCCeEEEEEecCCCCEEEEEeCCCc--
Q 004987 608 NLVCSLSFDRDGELFAAAGVN-----KKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGV-- 680 (720)
Q Consensus 608 ~~V~sv~f~~dg~~lat~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~laS~s~D~~-- 680 (720)
..+.+++|||||++||.++.+ .+|+|||+.++. .+.......++..++|+|+ ..|+.+++|+.
T Consensus 163 ~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~--------~~~~~~~~~~~~~~~wspD--~~l~~~~~~~~~~ 232 (741)
T 1yr2_A 163 TALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGK--------PLADELKWVKFSGLAWLGN--DALLYSRFAEPKE 232 (741)
T ss_dssp EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCC--------EEEEEEEEEESCCCEESTT--SEEEEEECCCC--
T ss_pred EEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCC--------CCCccCCCceeccEEEECC--CEEEEEEecCccc
Confidence 467899999999999987765 579999998762 1111111223468899996 57887777765
Q ss_pred ------------EEEEECCCCc----EEEE-------EEEEeecCCceEEEecC
Q 004987 681 ------------VQVGQVLHLI----YFSA-------LYCIVLNKLLIIFRYGM 711 (720)
Q Consensus 681 ------------v~lWD~~tg~----~~~~-------~~~v~~~~~~~~~~~~~ 711 (720)
|.+|++.|++ .+.+ +.++.|++.+..+...+
T Consensus 233 ~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~ 286 (741)
T 1yr2_A 233 GQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITS 286 (741)
T ss_dssp ------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEE
T ss_pred ccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEE
Confidence 9999999886 3332 67889999886555444
No 433
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=97.23 E-value=0.00016 Score=75.58 Aligned_cols=103 Identities=8% Similarity=0.015 Sum_probs=70.6
Q ss_pred eeeehhhhcccCC-CCCc--eecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 004987 63 RKHSDGVELTHGD-HLRN--QGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 63 r~~~e~~~L~~l~-HpnI--V~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LH 138 (720)
+..+|..+|..+. +..| .+++. ...........|+|||+ .|.+|.+... ..++..+...++.|++..|..||
T Consensus 56 ~~~~E~~~l~~l~~~~~v~vP~~~~-~~~~~~~~~~~~~vm~~i~G~~l~~~~~---~~l~~~~~~~~~~~l~~~la~LH 131 (304)
T 3sg8_A 56 NLFNEVNILKRIHNKLPLPIPEVVF-TGMPSETYQMSFAGFTKIKGVPLTPLLL---NNLPKQSQNQAAKDLARFLSELH 131 (304)
T ss_dssp HHHHHHHHHHHHTTSSSSCCCCEEE-ECCCCSSCSCSCEEEECCCCEECCHHHH---HTSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCCceEe-ecCCCCCCCcceEEEcccCCeECCcccc---ccCCHHHHHHHHHHHHHHHHHHH
Confidence 4446666766552 3222 23333 22222222245789999 8888875432 23788888999999999999999
Q ss_pred H----------------------------------------------------------cCceeccCCCCcEEEcc--CC
Q 004987 139 S----------------------------------------------------------QGIVVHNVRPSCFVMSS--FN 158 (720)
Q Consensus 139 s----------------------------------------------------------~gIvHrDLKP~NILl~~--~~ 158 (720)
+ ..++|+|++|.||+++. .+
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~ 211 (304)
T 3sg8_A 132 SINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNT 211 (304)
T ss_dssp HSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTE
T ss_pred cCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCC
Confidence 6 23699999999999997 45
Q ss_pred ceEEeccCccc
Q 004987 159 HVSFIESASCS 169 (720)
Q Consensus 159 ~vkliDfg~a~ 169 (720)
.+.++||+.+.
T Consensus 212 ~~~~iD~~~~~ 222 (304)
T 3sg8_A 212 ICGIIDFGDAA 222 (304)
T ss_dssp EEEECCCTTCE
T ss_pred EEEEEeCCCCc
Confidence 67899998873
No 434
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=97.20 E-value=0.00032 Score=74.82 Aligned_cols=92 Identities=11% Similarity=0.050 Sum_probs=63.3
Q ss_pred CCeEEEEECCCCCEEEEeeCCCcEEEeeCC-cccccccccccceEEecCCCCeEEEEEecCCCC-EEEEEe---------
Q 004987 608 NLVCSLSFDRDGELFAAAGVNKKIKVFECD-AIINENRDIHYPVVEMASRSKLSSICWNSYIKS-QIASSN--------- 676 (720)
Q Consensus 608 ~~V~sv~f~~dg~~lat~~~d~~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~-~laS~s--------- 676 (720)
..+..++|+|||++|++++.+ +|.+||+. ++.. ..+......+...+++|+|+++. +|++++
T Consensus 40 ~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~------~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~ 112 (365)
T 1jof_A 40 EPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEI------VHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYAN 112 (365)
T ss_dssp CCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEE------EEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEE
T ss_pred CCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCE------EEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccc
Confidence 457899999999999999988 99999975 3310 01111111123567899996543 466765
Q ss_pred ----CCCcEEEEECC-CCcEEEE-----------EEEEeecCCceE
Q 004987 677 ----FEGVVQVGQVL-HLIYFSA-----------LYCIVLNKLLII 706 (720)
Q Consensus 677 ----~D~~v~lWD~~-tg~~~~~-----------~~~v~~~~~~~~ 706 (720)
.|++|++|++. .|+.... +.+++|++....
T Consensus 113 ~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~ 158 (365)
T 1jof_A 113 PFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETY 158 (365)
T ss_dssp EESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSE
T ss_pred eeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCE
Confidence 69999999997 5654322 568899988753
No 435
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=97.18 E-value=0.0022 Score=73.06 Aligned_cols=93 Identities=14% Similarity=-0.004 Sum_probs=68.9
Q ss_pred ccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCC--cccccccccccceEEecCCCCeEEEEEe-
Q 004987 589 FSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECD--AIINENRDIHYPVVEMASRSKLSSICWN- 665 (720)
Q Consensus 589 ~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~--~~~~~~~~~~~~~~~~~~~~~i~~l~~~- 665 (720)
-.+.++++++.. ...+..+.|+|||+++.+++.|++|.+||+. +. ..+.++.....-..++|+
T Consensus 184 ~~t~~v~~~i~~------g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~--------~~v~~i~~G~~P~~ia~s~ 249 (567)
T 1qks_A 184 GSTYEIKTVLDT------GYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEP--------TTVAEIKIGSEARSIETSK 249 (567)
T ss_dssp TTTCCEEEEEEC------SSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSC--------CEEEEEECCSEEEEEEECC
T ss_pred CCCCeEEEEEeC------CCCccceEECCCCCEEEEEcCCCeEEEEECCCCCC--------cEeEEEecCCCCceeEEcc
Confidence 356677777765 3456799999999999999999999999985 33 123344333446799999
Q ss_pred ---cCCCCEEEEEe-CCCcEEEEECCCCcEEEEEE
Q 004987 666 ---SYIKSQIASSN-FEGVVQVGQVLHLIYFSALY 696 (720)
Q Consensus 666 ---~~~~~~laS~s-~D~~v~lWD~~tg~~~~~~~ 696 (720)
|++ .+|+.++ .+++|.|||..|.+.+++|.
T Consensus 250 ~~~pDG-k~l~v~n~~~~~v~ViD~~t~~~~~~i~ 283 (567)
T 1qks_A 250 MEGWED-KYAIAGAYWPPQYVIMDGETLEPKKIQS 283 (567)
T ss_dssp STTCTT-TEEEEEEEETTEEEEEETTTCCEEEEEE
T ss_pred ccCCCC-CEEEEEEccCCeEEEEECCCCcEEEEEe
Confidence 555 4555555 56999999999999988753
No 436
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=97.12 E-value=0.0058 Score=62.05 Aligned_cols=102 Identities=8% Similarity=0.023 Sum_probs=72.9
Q ss_pred CCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-------CCCCeEEEEEecCCCCEEE
Q 004987 601 GDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-------SRSKLSSICWNSYIKSQIA 673 (720)
Q Consensus 601 ~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-------~~~~i~~l~~~~~~~~~la 673 (720)
|.-.++-..+.+|+|+++|.++++.+.+++|.+||.... .+..+. +...+.++++++.++.+++
T Consensus 23 g~~~g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g~---------~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v 93 (286)
T 1q7f_A 23 GVMEGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGR---------FKFQFGECGKRDSQLLYPNRVAVVRNSGDIIV 93 (286)
T ss_dssp SSSTTCBSCEEEEEECTTCCEEEEEGGGTEEEEECTTSC---------EEEEECCBSSSTTCBSSEEEEEEETTTTEEEE
T ss_pred CCCCCccCCCceEEECCCCCEEEEECCCCEEEEECCCCc---------EEEEecccCCCcccccCceEEEEEcCCCeEEE
Confidence 344455677999999999999999999999999997532 111111 1235889999644555655
Q ss_pred EEeC-CCcEEEEECCCCcEEEE--------EEEEeecCCceEEEecCc
Q 004987 674 SSNF-EGVVQVGQVLHLIYFSA--------LYCIVLNKLLIIFRYGMF 712 (720)
Q Consensus 674 S~s~-D~~v~lWD~~tg~~~~~--------~~~v~~~~~~~~~~~~~~ 712 (720)
+... ++.|.+|| .+|+.+.+ .+++++++....+..+..
T Consensus 94 ~~~~~~~~i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~ 140 (286)
T 1q7f_A 94 TERSPTHQIQIYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECK 140 (286)
T ss_dssp EECGGGCEEEEEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETT
T ss_pred EcCCCCCEEEEEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECC
Confidence 5533 89999999 67777664 578888888777766544
No 437
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=97.11 E-value=0.0015 Score=69.28 Aligned_cols=97 Identities=6% Similarity=-0.059 Sum_probs=66.0
Q ss_pred CCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCeEEEEE--ecCCCCEEEE---------
Q 004987 606 SSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICW--NSYIKSQIAS--------- 674 (720)
Q Consensus 606 ~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~--~~~~~~~laS--------- 674 (720)
+...+.+++|+|||+.||.++.++.|++||+.++... .+... +...+....| +|+ +.+|+.
T Consensus 79 ~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~------~~~~~-~~~~~~~~~~~~~~d-g~~l~~~~~~~~~~~ 150 (388)
T 3pe7_A 79 RGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEEN------VVYQV-PAEWVGYGTWVANSD-CTKLVGIEIRREDWV 150 (388)
T ss_dssp SCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEE------EEEEC-CTTEEEEEEEEECTT-SSEEEEEEEEGGGCC
T ss_pred CCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcce------eeeec-hhhcccccceeECCC-CCeeccccccCcccc
Confidence 3445557789999999999999999999998876210 11111 1333444444 774 456663
Q ss_pred -------------EeCCCcEEEEECCCCcEEEE------EEEEeecC-CceEEEec
Q 004987 675 -------------SNFEGVVQVGQVLHLIYFSA------LYCIVLNK-LLIIFRYG 710 (720)
Q Consensus 675 -------------~s~D~~v~lWD~~tg~~~~~------~~~v~~~~-~~~~~~~~ 710 (720)
++.+..|.+||+.+|+...- +..+.|+| ....+.+.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~sp~dg~~l~~~ 206 (388)
T 3pe7_A 151 PLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQENQWLGHPIYRPYDDSTVAFC 206 (388)
T ss_dssp CCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEE
T ss_pred cccccchhhhhhccCCcceEEEEECCCCceEEeecCCccccccEECCCCCCEEEEE
Confidence 34568899999999975543 67889999 77655543
No 438
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=97.07 E-value=0.006 Score=63.85 Aligned_cols=97 Identities=15% Similarity=0.008 Sum_probs=72.7
Q ss_pred CCCeEEEEECCC-CCEEEEeeCCCcEEEeeCCcccccccccccceEEe---cCCCCeEEEEEecCCCCEEEEEe------
Q 004987 607 SNLVCSLSFDRD-GELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM---ASRSKLSSICWNSYIKSQIASSN------ 676 (720)
Q Consensus 607 ~~~V~sv~f~~d-g~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~---~~~~~i~~l~~~~~~~~~laS~s------ 676 (720)
-....+|+|+|+ |.++++...+++|++||..++. .+..+ .....+..++|+| +-.+++.+
T Consensus 195 ~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~--------~~~~~~~~~~~~~~~~~~~~p--g~~~~~~g~~~v~~ 264 (329)
T 3fvz_A 195 FSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKE--------FVREIKHASFGRNVFAISYIP--GFLFAVNGKPYFGD 264 (329)
T ss_dssp ESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCC--------EEEEECCTTTTTCEEEEEEET--TEEEEEECCCCTTC
T ss_pred cCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCc--------EEEEEeccccCCCcceeeecC--CEEEEeCCCEEecc
Confidence 356899999999 8889999999999999987541 12222 1245688999999 32333332
Q ss_pred -CCCcEEEEECCCCcEEEE----------EEEEeecCCceEEEecCcc
Q 004987 677 -FEGVVQVGQVLHLIYFSA----------LYCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 677 -~D~~v~lWD~~tg~~~~~----------~~~v~~~~~~~~~~~~~~~ 713 (720)
.+.+|++||..+|+.+.+ .+.|++++...+++.+..+
T Consensus 265 ~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~ 312 (329)
T 3fvz_A 265 QEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHT 312 (329)
T ss_dssp SCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSS
T ss_pred CCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCC
Confidence 345999999999998877 5789999998888877654
No 439
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=97.07 E-value=0.0018 Score=63.66 Aligned_cols=59 Identities=12% Similarity=0.014 Sum_probs=45.7
Q ss_pred CCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCceeccCCCCcEEEccCCceEE
Q 004987 104 DVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-QGIVVHNVRPSCFVMSSFNHVSF 162 (720)
Q Consensus 104 g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs-~gIvHrDLKP~NILl~~~~~vkl 162 (720)
..+|.++|...+.+++++++|.++.|.+.+|.-+-. ..-..+=+-|..|++..+|.|.+
T Consensus 32 ~vSL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~~~~~~~~i~~~~~i~l~~dG~V~f 91 (229)
T 2yle_A 32 ALSLEEILRLYNQPINEEQAWAVCYQCCGSLRAAARRRQPRHRVRSAAQIRVWRDGAVTL 91 (229)
T ss_dssp EEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSGGGEEEETTSCEEE
T ss_pred cccHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhhcccCCceecCCcceEEecCCceec
Confidence 458999998888889999999999999999877621 11113334568999999998887
No 440
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.05 E-value=0.00068 Score=72.00 Aligned_cols=79 Identities=11% Similarity=-0.005 Sum_probs=55.8
Q ss_pred CCCCeEEEEECCCCCEEEEeeCC---CcEEEeeCCcccccccccccceEEecCCCC-eEEEEEecCCCCEEEEEeCCCcE
Q 004987 606 SSNLVCSLSFDRDGELFAAAGVN---KKIKVFECDAIINENRDIHYPVVEMASRSK-LSSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 606 ~~~~V~sv~f~~dg~~lat~~~d---~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-i~~l~~~~~~~~~laS~s~D~~v 681 (720)
|...+.+++|+|||++||.++.. ..|.+||..+.. +.....+... ...+.|+|+ +.+||.++.++.|
T Consensus 34 ~~~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~--------~~~l~~~~~~~~~~~~~spd-g~~l~~~~~~~~l 104 (396)
T 3c5m_A 34 HRNYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQ--------AVQLTEGKGDNTFGGFISTD-ERAFFYVKNELNL 104 (396)
T ss_dssp ECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTE--------EEECCCSSCBCTTTCEECTT-SSEEEEEETTTEE
T ss_pred cceeeecCcCCCCCCEEEEEEecCCCceEEEEECCCCc--------EEEeecCCCCccccceECCC-CCEEEEEEcCCcE
Confidence 34557889999999998877543 478888977652 1111112223 334789995 5689999999999
Q ss_pred EEEECCCCcEEE
Q 004987 682 QVGQVLHLIYFS 693 (720)
Q Consensus 682 ~lWD~~tg~~~~ 693 (720)
.+||+.+|+...
T Consensus 105 ~~~d~~~~~~~~ 116 (396)
T 3c5m_A 105 MKVDLETLEEQV 116 (396)
T ss_dssp EEEETTTCCEEE
T ss_pred EEEECCCCCcEE
Confidence 999999987654
No 441
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=97.04 E-value=0.0013 Score=75.77 Aligned_cols=83 Identities=8% Similarity=0.035 Sum_probs=58.6
Q ss_pred CCCCCeEEEEECCCCCEEEEeeCCC--------cEEEeeCC-cccccccccccceEEecC-CCCeEEEEEecCCCCEEEE
Q 004987 605 NSSNLVCSLSFDRDGELFAAAGVNK--------KIKVFECD-AIINENRDIHYPVVEMAS-RSKLSSICWNSYIKSQIAS 674 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~~lat~~~d~--------~i~iwd~~-~~~~~~~~~~~~~~~~~~-~~~i~~l~~~~~~~~~laS 674 (720)
.+...+.+++|||||++||.++.++ .|++||+. ++. ...+.....+ ...+..++|+|+++ ++++
T Consensus 185 ~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~-----~~~~~~l~~~~~~~~~~~~~spdg~-l~~~ 258 (662)
T 3azo_A 185 DAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGR-----FADTRTLLGGPEEAIAQAEWAPDGS-LIVA 258 (662)
T ss_dssp SCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSC-----EEEEEEEEEETTBCEEEEEECTTSC-EEEE
T ss_pred cCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCc-----ccccEEeCCCCCceEcceEECCCCe-EEEE
Confidence 4457888999999999999888664 79999987 330 0011112222 46799999999766 8999
Q ss_pred EeCCC--cEEEEECCCCcEEE
Q 004987 675 SNFEG--VVQVGQVLHLIYFS 693 (720)
Q Consensus 675 ~s~D~--~v~lWD~~tg~~~~ 693 (720)
++.|+ .|.+||+.+|+...
T Consensus 259 ~~~~~~~~l~~~~~~~~~~~~ 279 (662)
T 3azo_A 259 TDRTGWWNLHRVDPATGAATQ 279 (662)
T ss_dssp ECTTSSCEEEEECTTTCCEEE
T ss_pred ECCCCCeEEEEEECCCCceee
Confidence 99999 45555666776543
No 442
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=97.03 E-value=0.00053 Score=72.16 Aligned_cols=94 Identities=5% Similarity=-0.021 Sum_probs=67.5
Q ss_pred eeehhhhcccCCC----CCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 004987 64 KHSDGVELTHGDH----LRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 64 ~~~e~~~L~~l~H----pnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LH 138 (720)
.++|..+|..+.+ ..+.++++ + + ..|++||| .|.+|.+... ..++..+...++.+++..|..||
T Consensus 74 ~~~E~~~L~~L~~~~~~~~vP~v~~-~---~----~~~lvme~i~G~~l~~~~~---~~l~~~~~~~~~~~l~~~La~LH 142 (320)
T 3r70_A 74 QKRELELYRFLENCKLSYQIPAVVY-Q---S----DRFNIMKYIKGERITYEQY---HKLSEKEKDALAYDEATFLKELH 142 (320)
T ss_dssp HHHHHHHHHHHTTSCCSSBCCCEEE-E---C----SSCEEEECCCCBCCCHHHH---TTSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCcceEEe-c---C----CcEEEEeecCCcccccccc---ccCCHHHHHHHHHHHHHHHHHHh
Confidence 3466666666655 12334444 2 1 34799999 8888864331 23678888889999999999999
Q ss_pred HcC---------------------------------------------------------------ceeccCCCCcEEEc
Q 004987 139 SQG---------------------------------------------------------------IVVHNVRPSCFVMS 155 (720)
Q Consensus 139 s~g---------------------------------------------------------------IvHrDLKP~NILl~ 155 (720)
+.. ++|+|++|.|||++
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~ 222 (320)
T 3r70_A 143 SIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFR 222 (320)
T ss_dssp HSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEE
T ss_pred CCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEE
Confidence 532 39999999999999
Q ss_pred cCCceEEeccCcc
Q 004987 156 SFNHVSFIESASC 168 (720)
Q Consensus 156 ~~~~vkliDfg~a 168 (720)
..+.+.++||+.+
T Consensus 223 ~~~~~~~iD~~~~ 235 (320)
T 3r70_A 223 NNRLFGVIDFGDF 235 (320)
T ss_dssp TTEEEEECCCTTC
T ss_pred CCceEEEECCccc
Confidence 8655799999987
No 443
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=96.97 E-value=0.0035 Score=64.23 Aligned_cols=93 Identities=11% Similarity=-0.061 Sum_probs=70.7
Q ss_pred CCCeEEEEECCCCC-EEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCeEEEEEecCCCCEEEEEeCCCcEEEEE
Q 004987 607 SNLVCSLSFDRDGE-LFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQ 685 (720)
Q Consensus 607 ~~~V~sv~f~~dg~-~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~laS~s~D~~v~lWD 685 (720)
.....+++|+|+|+ +++++..++.|.+||..+. .. ........+.+++|+|+ +.++++...++.|.+||
T Consensus 27 ~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~~--------~~~~~~~~~~~l~~~~d-g~l~v~~~~~~~i~~~d 96 (296)
T 3e5z_A 27 FTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-LS--------PEMHPSHHQNGHCLNKQ-GHLIACSHGLRRLERQR 96 (296)
T ss_dssp CSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-EE--------EEESSCSSEEEEEECTT-CCEEEEETTTTEEEEEC
T ss_pred CccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-eE--------EEECCCCCcceeeECCC-CcEEEEecCCCeEEEEc
Confidence 46688999999998 8889999999999997654 11 11123456899999995 45787777789999999
Q ss_pred CCCCcEEEE-----------EEEEeecCCceEEEe
Q 004987 686 VLHLIYFSA-----------LYCIVLNKLLIIFRY 709 (720)
Q Consensus 686 ~~tg~~~~~-----------~~~v~~~~~~~~~~~ 709 (720)
..+|+...- ++.+++++...+..+
T Consensus 97 ~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vt 131 (296)
T 3e5z_A 97 EPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFS 131 (296)
T ss_dssp STTCCEEEEECEETTEECCCCCCEEECTTSCEEEE
T ss_pred CCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEE
Confidence 999885432 245788888877775
No 444
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=96.90 E-value=0.0015 Score=69.90 Aligned_cols=89 Identities=11% Similarity=0.039 Sum_probs=63.4
Q ss_pred cceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEee----------CCCcEEEeeCCcccccccccccceEEec-----
Q 004987 590 SKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAG----------VNKKIKVFECDAIINENRDIHYPVVEMA----- 654 (720)
Q Consensus 590 ~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~----------~d~~i~iwd~~~~~~~~~~~~~~~~~~~----- 654 (720)
.+.++++++..| .+. .++|+|||+++.+++ .+++|.+||..+.. .+.++.
T Consensus 39 ~t~~~~~~i~~g-----~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~--------~~~~i~~~~~~ 103 (361)
T 2oiz_A 39 TNGKFLGMVPTA-----FNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLT--------FEKEISLPPKR 103 (361)
T ss_dssp TTCCEEEEEECC-----EEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCC--------EEEEEEECTTB
T ss_pred CCCeEEEEecCC-----CCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCc--------EEEEEEcCccc
Confidence 456677777632 233 899999999888775 37789999987651 222221
Q ss_pred --CCCCeEEEEEecCCCCEEEEEeC--CCcEEEEECCCCcEEEE
Q 004987 655 --SRSKLSSICWNSYIKSQIASSNF--EGVVQVGQVLHLIYFSA 694 (720)
Q Consensus 655 --~~~~i~~l~~~~~~~~~laS~s~--D~~v~lWD~~tg~~~~~ 694 (720)
+......++++|++ .+|+.+.+ +++|.|||+.+++.+.+
T Consensus 104 ~~~g~~p~~i~~spdg-~~l~v~n~~~~~~v~v~d~~~~~~~~~ 146 (361)
T 2oiz_A 104 VQGLNYDGLFRQTTDG-KFIVLQNASPATSIGIVDVAKGDYVED 146 (361)
T ss_dssp CCBCCCGGGEEECTTS-SEEEEEEESSSEEEEEEETTTTEEEEE
T ss_pred cccCCCcceEEECCCC-CEEEEECCCCCCeEEEEECCCCcEEEE
Confidence 12346689999965 57777764 68999999999998877
No 445
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=96.89 E-value=0.0014 Score=68.41 Aligned_cols=100 Identities=7% Similarity=-0.092 Sum_probs=67.0
Q ss_pred eeeehhhhcccCCCCC---ceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 004987 63 RKHSDGVELTHGDHLR---NQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 63 r~~~e~~~L~~l~Hpn---IV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LH 138 (720)
+..+|..+|..+.+.. |.+++. +... . ....|++||+ .|.+|.+..-. .++..+...++.++...|..||
T Consensus 55 ~~~~E~~~L~~L~~~~~v~VP~~~~-~~~~-~-~g~~~~v~e~i~G~~l~~~~~~---~l~~~~~~~~~~~lg~~La~LH 128 (306)
T 3tdw_A 55 ELNKEIQLLPLLVGCVKVNIPQYVY-IGKR-S-DGNPFVGYRKVQGQILGEDGMA---VLPDDAKDRLALQLAEFMNELS 128 (306)
T ss_dssp HHHHHHHHHHHHTTTCSSBCCCEEE-EEEC-T-TSCEEEEEECCCSEECHHHHHT---TSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCCCeEe-eccc-C-CCceEEEEeccCCeECchhhhh---hCCHHHHHHHHHHHHHHHHHHh
Confidence 4457777877776532 334444 2221 1 2345799999 88888763311 2566666777777777777777
Q ss_pred Hc------------------------------------------------------------CceeccCCCCcEEEcc--
Q 004987 139 SQ------------------------------------------------------------GIVVHNVRPSCFVMSS-- 156 (720)
Q Consensus 139 s~------------------------------------------------------------gIvHrDLKP~NILl~~-- 156 (720)
+. .++|+|++|.|||++.
T Consensus 129 ~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~ 208 (306)
T 3tdw_A 129 AFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNS 208 (306)
T ss_dssp HSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTC
T ss_pred cCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCC
Confidence 52 3499999999999987
Q ss_pred -CCce-EEeccCcc
Q 004987 157 -FNHV-SFIESASC 168 (720)
Q Consensus 157 -~~~v-kliDfg~a 168 (720)
++.+ .++||+.+
T Consensus 209 ~~~~~~~~iD~~~a 222 (306)
T 3tdw_A 209 RQTPLTGIIDFGDA 222 (306)
T ss_dssp SSCCEEEECCCTTC
T ss_pred CCCceEEEEehhhc
Confidence 4564 79999876
No 446
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=96.86 E-value=0.0046 Score=66.85 Aligned_cols=69 Identities=7% Similarity=-0.103 Sum_probs=53.9
Q ss_pred CCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCeEEEEEecCCCCEEEEEeCCCcEEEEEC
Q 004987 607 SNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQV 686 (720)
Q Consensus 607 ~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~laS~s~D~~v~lWD~ 686 (720)
...|.++.+.+.. ||+++.||+|.+||+..... .. ....|+|+||+|.+ ++.|..||+|++|+.
T Consensus 126 ~~~v~~i~~~~p~--~av~~~dG~L~v~dl~~~~~--------~~---~~~~Vs~v~WSpkG---~~vg~~dg~i~~~~~ 189 (388)
T 1xip_A 126 EKPVFQLKNVNNT--LVILNSVNDLSALDLRTKST--------KQ---LAQNVTSFDVTNSQ---LAVLLKDRSFQSFAW 189 (388)
T ss_dssp SSCEEEEEECSSE--EEEEETTSEEEEEETTTCCE--------EE---EEESEEEEEECSSE---EEEEETTSCEEEEEE
T ss_pred ecceeeEEecCCC--EEEEECCCCEEEEEccCCcc--------cc---ccCCceEEEEcCCc---eEEEEcCCcEEEEcC
Confidence 4457888877543 99999999999999876521 11 13479999999954 788999999999999
Q ss_pred CCCcE
Q 004987 687 LHLIY 691 (720)
Q Consensus 687 ~tg~~ 691 (720)
.++++
T Consensus 190 ~~~~~ 194 (388)
T 1xip_A 190 RNGEM 194 (388)
T ss_dssp ETTEE
T ss_pred CCccc
Confidence 88774
No 447
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=96.80 E-value=0.0035 Score=66.42 Aligned_cols=72 Identities=13% Similarity=-0.050 Sum_probs=50.6
Q ss_pred CeEEEEECCCCCEEEEeeCC-----CcEEEeeCCcccccccccccceEEecCCCCeEEEEEec-CCCCEEEEEe------
Q 004987 609 LVCSLSFDRDGELFAAAGVN-----KKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNS-YIKSQIASSN------ 676 (720)
Q Consensus 609 ~V~sv~f~~dg~~lat~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~-~~~~~laS~s------ 676 (720)
.+.+++|+|||++||.++.+ ++|.+||+.++.. ..+..+. ... ++|+| ++. +|++++
T Consensus 239 ~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~------~~l~~~~---~~~-~~~s~~dg~-~l~~~~~~~p~~ 307 (396)
T 3c5m_A 239 SCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLEN------EEVMVMP---PCS-HLMSNFDGS-LMVGDGCDAPVD 307 (396)
T ss_dssp EEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCE------EEEEECC---SEE-EEEECSSSS-EEEEEECCC---
T ss_pred cccceEECCCCCEEEEEecCCCCccceEEEEECCCCCe------EEeeeCC---CCC-CCccCCCCc-eEEEecCCccee
Confidence 58889999999988877655 5599999876521 0111111 233 89999 654 777654
Q ss_pred ----------CCCcEEEEECCCCcE
Q 004987 677 ----------FEGVVQVGQVLHLIY 691 (720)
Q Consensus 677 ----------~D~~v~lWD~~tg~~ 691 (720)
.+..|.+||+.+|+.
T Consensus 308 ~~~~~~~~~~~~~~i~~~d~~~~~~ 332 (396)
T 3c5m_A 308 VADADSYNIENDPFLYVLNTKAKSA 332 (396)
T ss_dssp -------CCCCCCEEEEEETTTTBC
T ss_pred eccccccccCCCCcEEEEecccCce
Confidence 347899999998864
No 448
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=96.57 E-value=0.0053 Score=71.64 Aligned_cols=91 Identities=18% Similarity=0.200 Sum_probs=63.3
Q ss_pred CCCeEEEEECCCCCEEE-----EeeCCCcEEEeeCCcccccccccccceEEecCCCCeEEEEEecCCCCEEEEEeCCCc-
Q 004987 607 SNLVCSLSFDRDGELFA-----AAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGV- 680 (720)
Q Consensus 607 ~~~V~sv~f~~dg~~la-----t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~laS~s~D~~- 680 (720)
...|.+++|||||++|| +|+...+|+|||+.++. .+.......+...++|+ ++ +.|+.+++|..
T Consensus 128 ~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~--------~~~~~~~~~k~~~~~Ws-Dg-~~l~y~~~~~~~ 197 (693)
T 3iuj_A 128 TTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQ--------PLETPLKDVKFSGISWL-GN-EGFFYSSYDKPD 197 (693)
T ss_dssp CCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCS--------EEEEEEEEEESCCCEEE-TT-TEEEEEESSCCC
T ss_pred cEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCC--------CCccccCCceeccEEEe-CC-CEEEEEEecCcc
Confidence 45788999999999998 45555799999998862 11110111224678999 65 57888887755
Q ss_pred ------------EEEEECCCCcE----EEE--------EEEEeecCCceEE
Q 004987 681 ------------VQVGQVLHLIY----FSA--------LYCIVLNKLLIIF 707 (720)
Q Consensus 681 ------------v~lWD~~tg~~----~~~--------~~~v~~~~~~~~~ 707 (720)
|.+|++.|++. +.+ +.++.|++....+
T Consensus 198 ~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l 248 (693)
T 3iuj_A 198 GSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFL 248 (693)
T ss_dssp -------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEE
T ss_pred cccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEE
Confidence 99999998763 321 4577888887655
No 449
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=96.41 E-value=0.014 Score=61.17 Aligned_cols=110 Identities=6% Similarity=-0.013 Sum_probs=72.3
Q ss_pred hccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCC------Ce
Q 004987 586 YLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRS------KL 659 (720)
Q Consensus 586 ~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~------~i 659 (720)
...-.++++++++.. ......++|++||+++++...+++|.+||..+.. .+..+.... ..
T Consensus 68 viD~~t~~~~~~i~~------~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~--------~~~~i~~g~~~~~~~~p 133 (328)
T 3dsm_A 68 AIDINTFKEVGRITG------FTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYE--------ITGYIECPDMDMESGST 133 (328)
T ss_dssp EEETTTCCEEEEEEC------CSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTE--------EEEEEECTTCCTTTCBC
T ss_pred EEECcccEEEEEcCC------CCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCe--------EEEEEEcCCccccCCCc
Confidence 334456677777643 4668999999999877777689999999987752 111221112 45
Q ss_pred EEEEEecCCCCEEEEEe-CCCcEEEEECCCCcEEEEE------EEEeecCCceEEEecC
Q 004987 660 SSICWNSYIKSQIASSN-FEGVVQVGQVLHLIYFSAL------YCIVLNKLLIIFRYGM 711 (720)
Q Consensus 660 ~~l~~~~~~~~~laS~s-~D~~v~lWD~~tg~~~~~~------~~v~~~~~~~~~~~~~ 711 (720)
..+++. ++.++++.. .+++|.+||..+++.+.++ ..+.+++........+
T Consensus 134 ~~i~~~--~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~p~~i~~~~dG~l~v~~~ 190 (328)
T 3dsm_A 134 EQMVQY--GKYVYVNCWSYQNRILKIDTETDKVVDELTIGIQPTSLVMDKYNKMWTITD 190 (328)
T ss_dssp CCEEEE--TTEEEEEECTTCCEEEEEETTTTEEEEEEECSSCBCCCEECTTSEEEEEBC
T ss_pred ceEEEE--CCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCCCccceEEcCCCCEEEEEC
Confidence 567772 343444433 5899999999999988763 4566666555554443
No 450
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=96.37 E-value=0.014 Score=59.67 Aligned_cols=89 Identities=10% Similarity=-0.080 Sum_probs=61.2
Q ss_pred CCCeEEEEECCCCCEEEEeeCCCcEEEeeCC-cccccccccccceEEecCCCCeEEEEEecCCCCEEEEEeCCCcEEEEE
Q 004987 607 SNLVCSLSFDRDGELFAAAGVNKKIKVFECD-AIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQ 685 (720)
Q Consensus 607 ~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~laS~s~D~~v~lWD 685 (720)
...++.++|+|||+++++.+.+++|.+||+. .+. . .....+. -.....+.+++|++++ ++.++. ++.|.+||
T Consensus 171 ~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~--~-~~~~~~~-~~~~~~p~~i~~d~~G-~l~v~~--~~~v~~~~ 243 (296)
T 3e5z_A 171 RVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGE--T-EYQGVHF-TVEPGKTDGLRVDAGG-LIWASA--GDGVHVLT 243 (296)
T ss_dssp CSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSC--E-EEEEEEE-CCSSSCCCSEEEBTTS-CEEEEE--TTEEEEEC
T ss_pred CCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCc--C-cCCCeEe-eCCCCCCCeEEECCCC-CEEEEc--CCeEEEEC
Confidence 4668999999999988888889999999986 221 0 0000011 1123456789999964 566655 89999999
Q ss_pred CCCCcEEEE------EEEEeec-CC
Q 004987 686 VLHLIYFSA------LYCIVLN-KL 703 (720)
Q Consensus 686 ~~tg~~~~~------~~~v~~~-~~ 703 (720)
.. |+.+.. +++++|. +.
T Consensus 244 ~~-g~~~~~~~~~~~~~~~~f~~~d 267 (296)
T 3e5z_A 244 PD-GDELGRVLTPQTTSNLCFGGPE 267 (296)
T ss_dssp TT-SCEEEEEECSSCCCEEEEESTT
T ss_pred CC-CCEEEEEECCCCceeEEEECCC
Confidence 96 777665 4677884 44
No 451
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=96.25 E-value=0.0095 Score=64.26 Aligned_cols=92 Identities=16% Similarity=0.116 Sum_probs=64.2
Q ss_pred cccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEee----------CCCcEEEeeCCcccccccccccceEEe--cC
Q 004987 588 SFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAG----------VNKKIKVFECDAIINENRDIHYPVVEM--AS 655 (720)
Q Consensus 588 ~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~----------~d~~i~iwd~~~~~~~~~~~~~~~~~~--~~ 655 (720)
.-.+++++++++.| ... . ++|+|||+++..++ .+.+|.+||..+.. .+.++ ..
T Consensus 65 D~~t~~v~~~I~vG-----~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~--------v~~~I~v~~ 129 (386)
T 3sjl_D 65 DGEAGRVIGMIDGG-----FLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLL--------PTADIELPD 129 (386)
T ss_dssp ETTTTEEEEEEEEC-----SSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCC--------EEEEEEETT
T ss_pred ECCCCeEEEEEECC-----CCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCe--------EEEEEECCC
Confidence 34578888888853 222 4 99999999765554 47889999988761 22222 11
Q ss_pred ------CCCeEEEEEecCCCCEEEEEeC--CCcEEEEECCCCcEEEEE
Q 004987 656 ------RSKLSSICWNSYIKSQIASSNF--EGVVQVGQVLHLIYFSAL 695 (720)
Q Consensus 656 ------~~~i~~l~~~~~~~~~laS~s~--D~~v~lWD~~tg~~~~~~ 695 (720)
...-..+.++|+++ +|..+.. +++|.|+|+.+++.+.+|
T Consensus 130 g~r~~~g~~P~~~a~spDGk-~lyVan~~~~~~VsVID~~t~~vv~tI 176 (386)
T 3sjl_D 130 APRFLVGTYPWMTSLTPDGK-TLLFYQFSPAPAVGVVDLEGKAFKRML 176 (386)
T ss_dssp CCCCCBSCCGGGEEECTTSS-EEEEEECSSSCEEEEEETTTTEEEEEE
T ss_pred ccccccCCCCceEEEcCCCC-EEEEEEcCCCCeEEEEECCCCcEEEEE
Confidence 11345689999765 5555543 799999999999999885
No 452
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=96.11 E-value=0.037 Score=55.18 Aligned_cols=98 Identities=7% Similarity=-0.013 Sum_probs=71.3
Q ss_pred CCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCeEEEEEecCCCCEEEEEeCCCcEEEEECC
Q 004987 608 NLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVL 687 (720)
Q Consensus 608 ~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~laS~s~D~~v~lWD~~ 687 (720)
..+.+|+|+++|.++++...++.|.+||........ ....+-..+.+|++++++ .+.++...++.|.+||..
T Consensus 150 ~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~-------~~~~~~~~p~~i~~d~~g-~l~v~~~~~~~v~~~~~~ 221 (270)
T 1rwi_B 150 NDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVV-------LPFTDITAPWGIAVDEAG-TVYVTEHNTNQVVKLLAG 221 (270)
T ss_dssp CSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEE-------CCCSSCCSEEEEEECTTC-CEEEEETTTSCEEEECTT
T ss_pred CCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEe-------ecccCCCCceEEEECCCC-CEEEEECCCCcEEEEcCC
Confidence 467899999999998888888999999976541100 011122568899999964 677777778999999997
Q ss_pred CCcEEE-------EEEEEeecCCceEEEecCcc
Q 004987 688 HLIYFS-------ALYCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 688 tg~~~~-------~~~~v~~~~~~~~~~~~~~~ 713 (720)
+..... ..+++++++...++..+..+
T Consensus 222 ~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~ 254 (270)
T 1rwi_B 222 STTSTVLPFTGLNTPLAVAVDSDRTVYVADRGN 254 (270)
T ss_dssp CSCCEECCCCSCSCEEEEEECTTCCEEEEEGGG
T ss_pred CCcceeeccCCCCCceeEEECCCCCEEEEECCC
Confidence 654332 16888998877777666544
No 453
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=96.04 E-value=0.033 Score=57.23 Aligned_cols=90 Identities=9% Similarity=0.102 Sum_probs=64.0
Q ss_pred CCeEEEEECCCCCE-EEEeeCCCcEEEeeCC--cccccccccccceEEecC-CCCeEEEEEecCCCCEEEEEeCCCcEEE
Q 004987 608 NLVCSLSFDRDGEL-FAAAGVNKKIKVFECD--AIINENRDIHYPVVEMAS-RSKLSSICWNSYIKSQIASSNFEGVVQV 683 (720)
Q Consensus 608 ~~V~sv~f~~dg~~-lat~~~d~~i~iwd~~--~~~~~~~~~~~~~~~~~~-~~~i~~l~~~~~~~~~laS~s~D~~v~l 683 (720)
...+.++|+|||+. +++.+.+++|.+||+. ++.. .. ...+..+.. ......+++.+++ ++.++...++.|.+
T Consensus 149 ~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~--~~-~~~~~~~~~~~~~p~g~~~d~~G-~lwva~~~~~~v~~ 224 (297)
T 3g4e_A 149 DISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQI--SN-RRSVYKLEKEEQIPDGMCIDAEG-KLWVACYNGGRVIR 224 (297)
T ss_dssp SBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCE--EE-EEEEEECCGGGCEEEEEEEBTTS-CEEEEEETTTEEEE
T ss_pred ccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcc--cC-cEEEEECCCCCCCCCeeEECCCC-CEEEEEcCCCEEEE
Confidence 45689999999985 5677778999999974 2210 00 011122221 3457899999864 67777777889999
Q ss_pred EECCCCcEEEE-------EEEEeec
Q 004987 684 GQVLHLIYFSA-------LYCIVLN 701 (720)
Q Consensus 684 WD~~tg~~~~~-------~~~v~~~ 701 (720)
||..+|+.+.+ ++|++|.
T Consensus 225 ~d~~tG~~~~~i~~p~~~~t~~~f~ 249 (297)
T 3g4e_A 225 LDPVTGKRLQTVKLPVDKTTSCCFG 249 (297)
T ss_dssp ECTTTCCEEEEEECSSSBEEEEEEE
T ss_pred EcCCCceEEEEEECCCCCceEEEEe
Confidence 99999998876 6889997
No 454
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=95.84 E-value=0.027 Score=57.64 Aligned_cols=78 Identities=3% Similarity=-0.087 Sum_probs=61.5
Q ss_pred CCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCeEEEEEecCCCCEEEEEeCCCcEEEEECC
Q 004987 608 NLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVL 687 (720)
Q Consensus 608 ~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~laS~s~D~~v~lWD~~ 687 (720)
.....+++.+||.++++.+.+++|.+||.. + ..+..+.......++...+ ++++|++++.++.|..+|..
T Consensus 125 ~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G--------~~~w~~~~~~~~~~~~~~~-~g~~~v~~~~~~~v~~~d~~ 194 (276)
T 3no2_A 125 AQFRQINKNKKGNYLVPLFATSEVREIAPN-G--------QLLNSVKLSGTPFSSAFLD-NGDCLVACGDAHCFVQLNLE 194 (276)
T ss_dssp GSCSCCEECTTSCEEEEETTTTEEEEECTT-S--------CEEEEEECSSCCCEEEECT-TSCEEEECBTTSEEEEECTT
T ss_pred ccccCceECCCCCEEEEecCCCEEEEECCC-C--------CEEEEEECCCCccceeEcC-CCCEEEEeCCCCeEEEEeCc
Confidence 345667899999999999999999999976 5 2344554445567788887 45788888888899999999
Q ss_pred CCcEEEEE
Q 004987 688 HLIYFSAL 695 (720)
Q Consensus 688 tg~~~~~~ 695 (720)
||+.+-++
T Consensus 195 tG~~~w~~ 202 (276)
T 3no2_A 195 SNRIVRRV 202 (276)
T ss_dssp TCCEEEEE
T ss_pred CCcEEEEe
Confidence 99987653
No 455
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=95.79 E-value=0.036 Score=56.67 Aligned_cols=81 Identities=9% Similarity=-0.097 Sum_probs=58.8
Q ss_pred CCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCC--CCeEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE
Q 004987 617 RDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASR--SKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA 694 (720)
Q Consensus 617 ~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~--~~i~~l~~~~~~~~~laS~s~D~~v~lWD~~tg~~~~~ 694 (720)
..|++|++++.|++|.+||.+++ ..+..+... ..+.++.+.|+ +++|+ ++++.|..||. +|+.+-+
T Consensus 3 ~~~~~lv~~~~~~~v~~~d~~tG--------~~~w~~~~~~~~~~~~~~~~pd-G~ilv--s~~~~V~~~d~-~G~~~W~ 70 (276)
T 3no2_A 3 SPQHLLVGGSGWNKIAIINKDTK--------EIVWEYPLEKGWECNSVAATKA-GEILF--SYSKGAKMITR-DGRELWN 70 (276)
T ss_dssp CCCEEEEECTTCSEEEEEETTTT--------EEEEEEECCTTCCCCEEEECTT-SCEEE--ECBSEEEEECT-TSCEEEE
T ss_pred CCCcEEEeeCCCCEEEEEECCCC--------eEEEEeCCCccCCCcCeEECCC-CCEEE--eCCCCEEEECC-CCCEEEE
Confidence 35689999999999999998776 234455433 35889999995 56888 45788999999 8887765
Q ss_pred --------EEEEeecCCceEEEe
Q 004987 695 --------LYCIVLNKLLIIFRY 709 (720)
Q Consensus 695 --------~~~v~~~~~~~~~~~ 709 (720)
+.++.+.+....+..
T Consensus 71 ~~~~~~~~~~~~~~~~dG~~lv~ 93 (276)
T 3no2_A 71 IAAPAGCEMQTARILPDGNALVA 93 (276)
T ss_dssp EECCTTCEEEEEEECTTSCEEEE
T ss_pred EcCCCCccccccEECCCCCEEEE
Confidence 345556665555444
No 456
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=95.77 E-value=0.097 Score=54.02 Aligned_cols=92 Identities=12% Similarity=-0.013 Sum_probs=61.0
Q ss_pred CCCeEEEEECCCCCEEEEeeCC----CcEEEeeCCcccccccccccceEE-ecCCCCeEEEEEecCCCCEEEEEeC----
Q 004987 607 SNLVCSLSFDRDGELFAAAGVN----KKIKVFECDAIINENRDIHYPVVE-MASRSKLSSICWNSYIKSQIASSNF---- 677 (720)
Q Consensus 607 ~~~V~sv~f~~dg~~lat~~~d----~~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~i~~l~~~~~~~~~laS~s~---- 677 (720)
.+.|.+++|+|||++++++..+ +.|.+||..+.... .+.. ......+.+++|+|++ .++++...
T Consensus 86 ~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~------~~~~~~~~~~~~~~i~~d~~g-~l~v~~~~~~~~ 158 (333)
T 2dg1_A 86 KANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQ------DIIEDLSTAYCIDDMVFDSKG-GFYFTDFRGYST 158 (333)
T ss_dssp SSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCE------EEECSSSSCCCEEEEEECTTS-CEEEEECCCBTT
T ss_pred CCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEE------EEEccCccCCcccceEECCCC-CEEEEecccccc
Confidence 5679999999999988887766 79999998765211 0000 1124568999999954 56666654
Q ss_pred --CCcEEEEECCCCcEEEE------EEEEeecCCce
Q 004987 678 --EGVVQVGQVLHLIYFSA------LYCIVLNKLLI 705 (720)
Q Consensus 678 --D~~v~lWD~~tg~~~~~------~~~v~~~~~~~ 705 (720)
.+.|..||..+++.... ..+++|++...
T Consensus 159 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~ 194 (333)
T 2dg1_A 159 NPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEK 194 (333)
T ss_dssp BCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSS
T ss_pred CCCceEEEEeCCCCEEEEeecCCCcccceEECCCCC
Confidence 24455556666554321 56788888764
No 457
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=95.71 E-value=0.041 Score=58.97 Aligned_cols=86 Identities=3% Similarity=-0.145 Sum_probs=60.4
Q ss_pred eEEEEECCCCCEEEEee----------CCCcEEEeeCCcccccccccccceEEecCCCCeEEEEEecCCCCEEEEEe-CC
Q 004987 610 VCSLSFDRDGELFAAAG----------VNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSN-FE 678 (720)
Q Consensus 610 V~sv~f~~dg~~lat~~----------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~laS~s-~D 678 (720)
..-++|+|||..+-.+. .+++|-|+|..+. ..+..+.......++.|+|+++.+|+++. .+
T Consensus 269 ~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~--------~vv~~i~~g~~p~~i~~s~Dg~~~l~v~~~~~ 340 (373)
T 2mad_H 269 WQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVG--------QTSSQISLGHDVDAISVAQDGGPDLYALSAGT 340 (373)
T ss_pred eEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCC--------EEEEEEECCCCcCeEEECCCCCeEEEEEcCCC
Confidence 44578999998644432 2468999998776 23344443445789999997654778877 49
Q ss_pred CcEEEEECCCCcEEEEEEEEeecCC
Q 004987 679 GVVQVGQVLHLIYFSALYCIVLNKL 703 (720)
Q Consensus 679 ~~v~lWD~~tg~~~~~~~~v~~~~~ 703 (720)
++|.|||+.|++.+.++-.+.-+|.
T Consensus 341 ~~V~ViD~~t~~vv~~i~~vG~~P~ 365 (373)
T 2mad_H 341 EVLHIYDAGAGDQDQSTVELGSGPQ 365 (373)
T ss_pred CeEEEEECCCCCEEeeecCCCCCCc
Confidence 9999999999999987533333333
No 458
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=95.69 E-value=0.0047 Score=66.18 Aligned_cols=28 Identities=7% Similarity=0.059 Sum_probs=24.8
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcc
Q 004987 141 GIVVHNVRPSCFVMSSFNHVSFIESASC 168 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a 168 (720)
.++|+|++|.|||++..+.+.|+||+.+
T Consensus 214 ~l~HgDl~~~Nil~~~~~~~~viD~~~~ 241 (362)
T 3ovc_A 214 HLVHADFGSNNVLTDNGRITAVIDWSEA 241 (362)
T ss_dssp EEECSSCSSTTEEEETTEEEEECCCTTC
T ss_pred EEEeCCCCCCeEEEeCCCEEEEECCccc
Confidence 5799999999999987777789999887
No 459
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=95.68 E-value=0.012 Score=59.77 Aligned_cols=94 Identities=9% Similarity=-0.049 Sum_probs=60.8
Q ss_pred ehhhhcccCC-CCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHc---
Q 004987 66 SDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ--- 140 (720)
Q Consensus 66 ~e~~~L~~l~-HpnIV~l~~~~~~~~~~~~~~~lV~E~-~g~sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~~LHs~--- 140 (720)
+|..+|..+. +--|.+++. ++.++. ..|+|||+ .|.++.+.... .......+..++...|..||+.
T Consensus 68 ~E~~~l~~l~~~vPVP~v~~-~~~~~~---~~~lvme~l~G~~~~~~~~~-----~~~~~~~~~~~l~~~L~~Lh~~~~~ 138 (272)
T 4gkh_A 68 DEMVRLNWLTAFMPLPTIKH-FIRTPD---DAWLLTTAIPGKTAFQVLEE-----YPDSGENIVDALAVFLRRLHSIPVC 138 (272)
T ss_dssp HHHHHHHHHTTTSCCCCEEE-EEEETT---EEEEEEECCCSEEHHHHHHH-----CGGGHHHHHHHHHHHHHHHHTSCGG
T ss_pred HHHHHHHHhccCCCcCeEEE-EEEECC---eEEEEEEeeCCccccccccC-----CHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 4555555442 111345555 344442 46999999 88888876522 1123345566666666666631
Q ss_pred -------------------------------------------------------CceeccCCCCcEEEccCCceEEecc
Q 004987 141 -------------------------------------------------------GIVVHNVRPSCFVMSSFNHVSFIES 165 (720)
Q Consensus 141 -------------------------------------------------------gIvHrDLKP~NILl~~~~~vkliDf 165 (720)
.++|+|+.|.|||++..+.+-|+||
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDw 218 (272)
T 4gkh_A 139 NCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDV 218 (272)
T ss_dssp GCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCC
T ss_pred cCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEEC
Confidence 2689999999999987766779999
Q ss_pred Ccc
Q 004987 166 ASC 168 (720)
Q Consensus 166 g~a 168 (720)
+.+
T Consensus 219 e~a 221 (272)
T 4gkh_A 219 GRV 221 (272)
T ss_dssp TTC
T ss_pred ccc
Confidence 887
No 460
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=95.50 E-value=0.0079 Score=63.83 Aligned_cols=30 Identities=10% Similarity=0.180 Sum_probs=25.0
Q ss_pred cCceeccCCCCcEEEccCCceEEeccCccc
Q 004987 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCS 169 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~ 169 (720)
..++|+|++|.|||++..+.+.+|||..+.
T Consensus 222 ~~l~HgDl~~~Nil~~~~~~~~vIDwe~a~ 251 (357)
T 3ats_A 222 PVLLWGDARVGNVLYRDFQPVAVLDWEMVA 251 (357)
T ss_dssp CEEECSSCSGGGEEEETTEEEEECCGGGCE
T ss_pred ceEEeCCCCCCeEEEeCCcEEEEEcccccc
Confidence 468999999999999854457899998873
No 461
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=95.41 E-value=0.032 Score=64.80 Aligned_cols=76 Identities=9% Similarity=-0.043 Sum_probs=52.8
Q ss_pred EEEEECCCCCEEEEeeCCCc-------------EEEeeCCcccccccccccceEEec-CCCCeEEEEEecCCCCEEEEEe
Q 004987 611 CSLSFDRDGELFAAAGVNKK-------------IKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSN 676 (720)
Q Consensus 611 ~sv~f~~dg~~lat~~~d~~-------------i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~l~~~~~~~~~laS~s 676 (720)
.+++|+|||+.|+.++.|++ |++|++.+..... ..+.+.. +...+.++.|+|++ .+|+.++
T Consensus 171 ~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~----~lv~~~~~~~~~~~~~~~SpDG-~~l~~~~ 245 (695)
T 2bkl_A 171 ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKD----TVVHERTGDPTTFLQSDLSRDG-KYLFVYI 245 (695)
T ss_dssp CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGC----EEEECCCCCTTCEEEEEECTTS-CCEEEEE
T ss_pred cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhc----eEEEecCCCCEEEEEEEECCCC-CEEEEEE
Confidence 68999999999999999887 9999987652110 0122222 23468899999966 5666666
Q ss_pred CCC----cEEEEECCCCcE
Q 004987 677 FEG----VVQVGQVLHLIY 691 (720)
Q Consensus 677 ~D~----~v~lWD~~tg~~ 691 (720)
.++ .|.+||..+++.
T Consensus 246 ~~~~~~~~l~~~~~~~~~~ 264 (695)
T 2bkl_A 246 LRGWSENDVYWKRPGEKDF 264 (695)
T ss_dssp EETTTEEEEEEECTTCSSC
T ss_pred eCCCCceEEEEEcCCCCce
Confidence 555 677777766653
No 462
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=95.40 E-value=0.075 Score=52.87 Aligned_cols=96 Identities=9% Similarity=0.068 Sum_probs=69.0
Q ss_pred CCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCeEEEEEecCCCCEEEEEeCCCcEEEEECC
Q 004987 608 NLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVL 687 (720)
Q Consensus 608 ~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~laS~s~D~~v~lWD~~ 687 (720)
..+.+++|+++|.++++...++.|.+||..+.... .....+...+.+++++|++ +++++...++.|.+||..
T Consensus 108 ~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~-------~~~~~~~~~p~~i~~~~~g-~l~v~~~~~~~i~~~~~~ 179 (270)
T 1rwi_B 108 NYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQT-------VLPFTGLNDPDGVAVDNSG-NVYVTDTDNNRVVKLEAE 179 (270)
T ss_dssp SSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCE-------ECCCCSCCSCCCEEECTTC-CEEEEEGGGTEEEEECTT
T ss_pred CCCcceEECCCCCEEEEECCCCEEEEEECCCceeE-------eeccccCCCceeEEEeCCC-CEEEEECCCCEEEEEecC
Confidence 56899999999999888888999999985443110 0011122357889999954 577777778999999998
Q ss_pred CCcEEEE-------EEEEeecCCceEEEecC
Q 004987 688 HLIYFSA-------LYCIVLNKLLIIFRYGM 711 (720)
Q Consensus 688 tg~~~~~-------~~~v~~~~~~~~~~~~~ 711 (720)
++..... ..++++.+...++..+.
T Consensus 180 ~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~ 210 (270)
T 1rwi_B 180 SNNQVVLPFTDITAPWGIAVDEAGTVYVTEH 210 (270)
T ss_dssp TCCEEECCCSSCCSEEEEEECTTCCEEEEET
T ss_pred CCceEeecccCCCCceEEEECCCCCEEEEEC
Confidence 7765432 67888888766665553
No 463
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=95.38 E-value=0.042 Score=57.03 Aligned_cols=70 Identities=4% Similarity=-0.207 Sum_probs=52.6
Q ss_pred CCCCeEE-EEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCeEEEEEecCCCCEEEEEeCCCcE-EE
Q 004987 606 SSNLVCS-LSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVV-QV 683 (720)
Q Consensus 606 ~~~~V~s-v~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~laS~s~D~~v-~l 683 (720)
+...|.+ +.|+ || ++++++.+++++|| +.++ .+.....+...|.+++|+| .++++++.+++. +|
T Consensus 261 ~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g--------~~~~~~~~~~~v~~~~~s~---~~~~~~~~~~~~~~l 326 (347)
T 2gop_A 261 VDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDG--------EIKPIAKGRHWIMGFDVDE---IVVYLKETATRLREL 326 (347)
T ss_dssp CCSEEEEEEEET-TE-EEEEEEETTEEEEE-EESS--------SEEEEECSSSEEEEEEESS---SEEEEEECSSSCCEE
T ss_pred CCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCC--------ceEEEecCCCeEEeeeeeC---cEEEEEcCCCChHHh
Confidence 4566776 9999 99 99999999999999 8632 1222334466799999998 477777777765 89
Q ss_pred EECCCCc
Q 004987 684 GQVLHLI 690 (720)
Q Consensus 684 WD~~tg~ 690 (720)
|.+. |+
T Consensus 327 ~~~~-g~ 332 (347)
T 2gop_A 327 FTWD-GE 332 (347)
T ss_dssp EEES-SS
T ss_pred eEeC-Cc
Confidence 9887 65
No 464
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=95.21 E-value=0.088 Score=53.61 Aligned_cols=99 Identities=7% Similarity=-0.102 Sum_probs=64.3
Q ss_pred CCeEEEEECCCCCEEEE-------eeCCCcEEEeeCCcccccccccccceEEecCCCCeEEEEEecCCCCEEEEEeCCCc
Q 004987 608 NLVCSLSFDRDGELFAA-------AGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGV 680 (720)
Q Consensus 608 ~~V~sv~f~~dg~~lat-------~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~laS~s~D~~ 680 (720)
....+++|+++|.++++ ++.++.|.+||..+....... .|- .-.....+.+++|+++.+.++++.. +..
T Consensus 18 ~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~--~~~-~~~~~~~~~~i~~~~~~g~l~v~~~-~~~ 93 (314)
T 1pjx_A 18 PGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVIC--KPE-VNGYGGIPAGCQCDRDANQLFVADM-RLG 93 (314)
T ss_dssp TTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEE--CCE-ETTEECCEEEEEECSSSSEEEEEET-TTE
T ss_pred CCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEE--ecc-cCCCCCCCceEEEecCCCcEEEEEC-CCC
Confidence 45789999999999888 778999999997654211000 000 0001346899999986344454444 457
Q ss_pred EEEEECCCCcEEEE------------EEEEeecCCceEEEecC
Q 004987 681 VQVGQVLHLIYFSA------------LYCIVLNKLLIIFRYGM 711 (720)
Q Consensus 681 v~lWD~~tg~~~~~------------~~~v~~~~~~~~~~~~~ 711 (720)
|.+||.. |+.... ++++++.+...+...++
T Consensus 94 l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~ 135 (314)
T 1pjx_A 94 LLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAP 135 (314)
T ss_dssp EEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEEC
T ss_pred EEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEec
Confidence 8999988 765321 46778877766665554
No 465
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=95.21 E-value=0.042 Score=58.91 Aligned_cols=75 Identities=5% Similarity=-0.134 Sum_probs=53.0
Q ss_pred EEECCCCCEEEEe-e---C-----CCcEEEeeCCcccccccccccceEEecCCCCeEEEEEecCCCCEEEEEe-CCCcEE
Q 004987 613 LSFDRDGELFAAA-G---V-----NKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSN-FEGVVQ 682 (720)
Q Consensus 613 v~f~~dg~~lat~-~---~-----d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~laS~s-~D~~v~ 682 (720)
++|+|||+.+..+ . . +..+.|||+.+.. .+..+.-.....+++|+|+++.++++.. .+++|.
T Consensus 269 v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~--------vv~~i~vg~~p~gi~~s~Dg~~l~va~~~~~~~Vs 340 (368)
T 1mda_H 269 VAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQ--------TSGPISNGHDSDAIIAAQDGASDNYANSAGTEVLD 340 (368)
T ss_dssp EEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCC--------EEECCEEEEEECEEEECCSSSCEEEEEETTTTEEE
T ss_pred eEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCe--------EEEEEECCCCcceEEECCCCCEEEEEccCCCCeEE
Confidence 6899999864432 2 1 2345599988762 1222211224789999998776788888 599999
Q ss_pred EEECCCCcEEEEE
Q 004987 683 VGQVLHLIYFSAL 695 (720)
Q Consensus 683 lWD~~tg~~~~~~ 695 (720)
|||+.|++.+.++
T Consensus 341 VID~~t~kvv~~I 353 (368)
T 1mda_H 341 IYDAASDQDQSSV 353 (368)
T ss_dssp EEESSSCEEEEEC
T ss_pred EEECCCCcEEEEE
Confidence 9999999999884
No 466
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=95.21 E-value=0.1 Score=55.92 Aligned_cols=90 Identities=12% Similarity=0.015 Sum_probs=62.2
Q ss_pred cccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEee----------CCCcEEEeeCCcccccccccccceEEecC--
Q 004987 588 SFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAG----------VNKKIKVFECDAIINENRDIHYPVVEMAS-- 655 (720)
Q Consensus 588 ~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~----------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-- 655 (720)
...+++++.+++.| .. ..++|+|||+++..+. .+.+|.+||..+.. .+.++..
T Consensus 53 D~~t~~~~~~i~~g-----~~--p~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~--------~~~~i~~~~ 117 (373)
T 2mad_H 53 DAGSGSILGHVNGG-----FL--PNPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFL--------PIADIELPD 117 (373)
T ss_pred ECCCCeEEEEecCC-----CC--CCeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCc--------EEEEEECCC
Confidence 34577888888753 12 2899999999877765 47889999987651 1211110
Q ss_pred ------CCCeEEEEEecCCCCEEEEEeC--CCcEEEEECCCCcEEEE
Q 004987 656 ------RSKLSSICWNSYIKSQIASSNF--EGVVQVGQVLHLIYFSA 694 (720)
Q Consensus 656 ------~~~i~~l~~~~~~~~~laS~s~--D~~v~lWD~~tg~~~~~ 694 (720)
...-..+.|+|+++ +|+.++. +++|.++| .+++.+.+
T Consensus 118 ~~~~~~g~~p~~~~~spDG~-~l~v~n~~~~~~v~viD-~t~~~~~~ 162 (373)
T 2mad_H 118 APRFDVGPYSWMNANTPNNA-DLLFFQFAAGPAVGLVV-QGGSSDDQ 162 (373)
T ss_pred ccccccCCCccceEECCCCC-EEEEEecCCCCeEEEEE-CCCCEEeE
Confidence 12235789999665 6665553 58899999 99998887
No 467
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=95.02 E-value=0.094 Score=59.55 Aligned_cols=78 Identities=6% Similarity=-0.020 Sum_probs=60.8
Q ss_pred ECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCeEEEEEecCCCCEEEEEeCCCcEEEEECC--CCcEE
Q 004987 615 FDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVL--HLIYF 692 (720)
Q Consensus 615 f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~laS~s~D~~v~lWD~~--tg~~~ 692 (720)
.++++.++++.+.+++|.|||..+. ..+..+.....+..+.|+|++ .+|+.++.|+.|.+||+. +++.+
T Consensus 163 ~d~~~~~~V~~~~~~~V~viD~~t~--------~v~~~i~~g~~p~~v~~SpDG-r~lyv~~~dg~V~viD~~~~t~~~v 233 (567)
T 1qks_A 163 WDLENLFSVTLRDAGQIALIDGSTY--------EIKTVLDTGYAVHISRLSASG-RYLFVIGRDGKVNMIDLWMKEPTTV 233 (567)
T ss_dssp CCGGGEEEEEETTTTEEEEEETTTC--------CEEEEEECSSCEEEEEECTTS-CEEEEEETTSEEEEEETTSSSCCEE
T ss_pred cCCCceEEEEeCCCCeEEEEECCCC--------eEEEEEeCCCCccceEECCCC-CEEEEEcCCCeEEEEECCCCCCcEe
Confidence 3466678999999999999998776 233344444567799999954 588888899999999996 88888
Q ss_pred EEE------EEEeec
Q 004987 693 SAL------YCIVLN 701 (720)
Q Consensus 693 ~~~------~~v~~~ 701 (720)
.++ ..++|+
T Consensus 234 ~~i~~G~~P~~ia~s 248 (567)
T 1qks_A 234 AEIKIGSEARSIETS 248 (567)
T ss_dssp EEEECCSEEEEEEEC
T ss_pred EEEecCCCCceeEEc
Confidence 774 577888
No 468
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=94.97 E-value=0.11 Score=52.75 Aligned_cols=74 Identities=19% Similarity=0.165 Sum_probs=54.7
Q ss_pred CCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCeEEEEEecCCCCEEEEEeCCCcEEEEEC
Q 004987 608 NLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEGVVQVGQV 686 (720)
Q Consensus 608 ~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~l~~~~~~~~~laS~s~D~~v~lWD~ 686 (720)
..+..++|+++|.++++...++.|.+||..++. .+..+. +...+.+++|+|++..+.+++..++.|..||+
T Consensus 226 ~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~--------~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~ 297 (314)
T 1pjx_A 226 GGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQ--------PKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEW 297 (314)
T ss_dssp CEEEEEEEBTTCCEEEEEETTTEEEEECTTCBS--------CSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEEC
T ss_pred CCCCceEECCCCCEEEEEcCCCEEEEEcCCCCc--------EeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeC
Confidence 567899999999999888889999999986441 111222 23568999999854335566667789999998
Q ss_pred CCC
Q 004987 687 LHL 689 (720)
Q Consensus 687 ~tg 689 (720)
.+.
T Consensus 298 ~~~ 300 (314)
T 1pjx_A 298 QRN 300 (314)
T ss_dssp SSC
T ss_pred CCC
Confidence 753
No 469
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=94.96 E-value=0.22 Score=53.96 Aligned_cols=91 Identities=10% Similarity=0.032 Sum_probs=63.5
Q ss_pred CCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCeEEEEEecCCCCEEEEEeCCC--cEEEEE
Q 004987 608 NLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEG--VVQVGQ 685 (720)
Q Consensus 608 ~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~laS~s~D~--~v~lWD 685 (720)
+....|+|+++|.++++...+++|++||..+.. ............ ++|+|. ++.|+.++.++ .|.+||
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~--------~~~~~~~~~~~~-ia~~~~-g~~l~~~d~~~~~~I~~~d 200 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNK--------VTTVHPGFKGGK-PAVTKD-KQRVYSIGWEGTHTVYVYM 200 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTE--------EEEEEETCCBCB-CEECTT-SSEEEEEBSSTTCEEEEEE
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCE--------EEEeeccCCCCc-eeEecC-CCcEEEEecCCCceEEEEE
Confidence 568899999999999998889999999987641 111111122233 999995 56888888876 788889
Q ss_pred CCCCcEEEE-----------EEEEeecC-CceEEE
Q 004987 686 VLHLIYFSA-----------LYCIVLNK-LLIIFR 708 (720)
Q Consensus 686 ~~tg~~~~~-----------~~~v~~~~-~~~~~~ 708 (720)
..++..... .+++++++ ...++.
T Consensus 201 ~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv 235 (409)
T 3hrp_A 201 KASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYF 235 (409)
T ss_dssp GGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEE
T ss_pred cCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEE
Confidence 876654332 35778877 444444
No 470
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=94.84 E-value=0.12 Score=53.98 Aligned_cols=79 Identities=9% Similarity=0.020 Sum_probs=58.4
Q ss_pred CCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCeEEEEEecCCCCEEEEEeCCCcEEEEEC
Q 004987 607 SNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQV 686 (720)
Q Consensus 607 ~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~laS~s~D~~v~lWD~ 686 (720)
.....++.++ ++++++++..+++|.+||..+. ..+..+........++++|++ .+.++..++++|.+||.
T Consensus 43 g~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~--------~~~~~i~~~~~p~~i~~~~~g-~lyv~~~~~~~v~~iD~ 112 (328)
T 3dsm_A 43 GDVAQSMVIR-DGIGWIVVNNSHVIFAIDINTF--------KEVGRITGFTSPRYIHFLSDE-KAYVTQIWDYRIFIINP 112 (328)
T ss_dssp BSCEEEEEEE-TTEEEEEEGGGTEEEEEETTTC--------CEEEEEECCSSEEEEEEEETT-EEEEEEBSCSEEEEEET
T ss_pred CccceEEEEE-CCEEEEEEcCCCEEEEEECccc--------EEEEEcCCCCCCcEEEEeCCC-eEEEEECCCCeEEEEEC
Confidence 3567888885 4667777778899999998876 233444445568899998854 45555558999999999
Q ss_pred CCCcEEEEE
Q 004987 687 LHLIYFSAL 695 (720)
Q Consensus 687 ~tg~~~~~~ 695 (720)
.|++.+.++
T Consensus 113 ~t~~~~~~i 121 (328)
T 3dsm_A 113 KTYEITGYI 121 (328)
T ss_dssp TTTEEEEEE
T ss_pred CCCeEEEEE
Confidence 999877654
No 471
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=94.46 E-value=0.31 Score=49.52 Aligned_cols=92 Identities=8% Similarity=0.044 Sum_probs=62.8
Q ss_pred cceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeC--CCcEEEeeCCcccccccccccceEE--ecCCCCeEEEEEe
Q 004987 590 SKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGV--NKKIKVFECDAIINENRDIHYPVVE--MASRSKLSSICWN 665 (720)
Q Consensus 590 ~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~--d~~i~iwd~~~~~~~~~~~~~~~~~--~~~~~~i~~l~~~ 665 (720)
.+.++++++.|+ .......++|++||.++++.|. +.+|+++|+.++. .+.. +..+..--.+++.
T Consensus 7 ~~~~vv~~~p~~----~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~--------v~~~i~l~~~~fgeGi~~~ 74 (266)
T 2iwa_A 7 YIVEVLNEFPHD----PYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGK--------VENIHKMDDSYFGEGLTLL 74 (266)
T ss_dssp EEEEEEEEEECC----TTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCC--------EEEEEECCTTCCEEEEEEE
T ss_pred cCceEEEEEECC----CCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCC--------EEEEEecCCCcceEEEEEe
Confidence 357899999873 1245789999999987777764 6899999998762 1111 1222223355665
Q ss_pred cCCCCEEEEEeCCCcEEEEECCCCcEEEEE
Q 004987 666 SYIKSQIASSNFEGVVQVGQVLHLIYFSAL 695 (720)
Q Consensus 666 ~~~~~~laS~s~D~~v~lWD~~tg~~~~~~ 695 (720)
. +.+.++.-.+++|-++|..|++.+.++
T Consensus 75 g--~~lyv~t~~~~~v~viD~~t~~v~~~i 102 (266)
T 2iwa_A 75 N--EKLYQVVWLKNIGFIYDRRTLSNIKNF 102 (266)
T ss_dssp T--TEEEEEETTCSEEEEEETTTTEEEEEE
T ss_pred C--CEEEEEEecCCEEEEEECCCCcEEEEE
Confidence 3 334445556899999999999988875
No 472
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=94.36 E-value=0.75 Score=45.86 Aligned_cols=95 Identities=12% Similarity=-0.016 Sum_probs=65.9
Q ss_pred CCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCeEEEEEecCCCCEEEEEeCCCcEEEE
Q 004987 606 SSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGVVQVG 684 (720)
Q Consensus 606 ~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~~~~~~~~~laS~s~D~~v~lW 684 (720)
+.+.+.+++++++|.++++...++.|.+||.. ... ..... .....+.+++++++ +.+.++...++.|..|
T Consensus 13 ~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~-------~~~~~~~~~~~~~~i~~~~~-g~l~v~~~~~~~i~~~ 83 (299)
T 2z2n_A 13 QDTGPYGITVSDKGKVWITQHKANMISCINLD-GKI-------TEYPLPTPDAKVMCLTISSD-GEVWFTENAANKIGRI 83 (299)
T ss_dssp SSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCE-------EEEECSSTTCCEEEEEECTT-SCEEEEETTTTEEEEE
T ss_pred cCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCe-------EEecCCcccCceeeEEECCC-CCEEEeCCCCCeEEEE
Confidence 35789999999999988887778999999976 310 00111 12456899999985 4577777778999999
Q ss_pred ECCCCcEEE--------EEEEEeecCCceEEEec
Q 004987 685 QVLHLIYFS--------ALYCIVLNKLLIIFRYG 710 (720)
Q Consensus 685 D~~tg~~~~--------~~~~v~~~~~~~~~~~~ 710 (720)
|.. |+... .+.++++.+...+...+
T Consensus 84 ~~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~ 116 (299)
T 2z2n_A 84 TKK-GIIKEYTLPNPDSAPYGITEGPNGDIWFTE 116 (299)
T ss_dssp CTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEE
T ss_pred CCC-CcEEEEeCCCcCCCceeeEECCCCCEEEEe
Confidence 986 44211 15677777665555543
No 473
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=94.32 E-value=0.25 Score=57.40 Aligned_cols=83 Identities=6% Similarity=-0.149 Sum_probs=50.6
Q ss_pred CCCCeEEEEECCCCCEEEEeeC-----CCcEEEeeCCcccccccccccceEEe-cCCCCeEEEEEecCCCCEEEEEeCC-
Q 004987 606 SSNLVCSLSFDRDGELFAAAGV-----NKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFE- 678 (720)
Q Consensus 606 ~~~~V~sv~f~~dg~~lat~~~-----d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~~~~~~~~~laS~s~D- 678 (720)
|...+.+++|+|||++|+.++. +..|.+||+.+.... .....+...+ .+...+.. .|+|+++.+++++..+
T Consensus 231 ~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~-~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~ 308 (710)
T 2xdw_A 231 EPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNG-ITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHS 308 (710)
T ss_dssp CTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSS-SCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTC
T ss_pred CCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccc-cCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCC
Confidence 4567889999999999887765 678999998651000 0000012222 22334444 5888655444444433
Q ss_pred --CcEEEEECCCCc
Q 004987 679 --GVVQVGQVLHLI 690 (720)
Q Consensus 679 --~~v~lWD~~tg~ 690 (720)
+.|.+||+.+++
T Consensus 309 ~~~~l~~~d~~~~~ 322 (710)
T 2xdw_A 309 PNYRLINIDFTDPE 322 (710)
T ss_dssp TTCEEEEEETTSCC
T ss_pred CCCEEEEEeCCCCC
Confidence 369999998874
No 474
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=94.28 E-value=0.18 Score=52.74 Aligned_cols=87 Identities=9% Similarity=-0.017 Sum_probs=57.7
Q ss_pred CCCCCeEEEEECCCCCEEEEeeC-----CCcEEEeeCCccc-ccccccccceEEecCCCCeEEEEEecCCCCEEEEEe--
Q 004987 605 NSSNLVCSLSFDRDGELFAAAGV-----NKKIKVFECDAII-NENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSN-- 676 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~~lat~~~-----d~~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~laS~s-- 676 (720)
++-..+.+|+|+++|.++++-.. +.+|.+||+.+.. .......... ....+.+..|+++|.++...++.+
T Consensus 64 ~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~--~~~~~~~~~v~vd~~~g~~yvtd~~~ 141 (343)
T 2qe8_A 64 ITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPI--TLSNSFVNDLAVDLIHNFVYISDPAP 141 (343)
T ss_dssp CCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTT--SCTTCCCCEEEEETTTTEEEEEECCS
T ss_pred cceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhh--cccccccceEEEecCCCEEEEEcCcc
Confidence 45678999999999997765433 6899999987652 0000000000 011245789999986555556655
Q ss_pred -CCCcEEEEECCCCcEEE
Q 004987 677 -FEGVVQVGQVLHLIYFS 693 (720)
Q Consensus 677 -~D~~v~lWD~~tg~~~~ 693 (720)
.++.|.+||..+|+..+
T Consensus 142 ~~~~~i~v~d~~~g~~~r 159 (343)
T 2qe8_A 142 DDKAALIRVDLQTGLAAR 159 (343)
T ss_dssp GGGCEEEEEETTTCCEEE
T ss_pred CCCCeEEEEECCCCCEEE
Confidence 68999999998887544
No 475
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=94.26 E-value=0.8 Score=45.63 Aligned_cols=94 Identities=14% Similarity=-0.002 Sum_probs=66.5
Q ss_pred CCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCeEEEEEecCCCCEEEEEeCCCcEEEEE
Q 004987 607 SNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEGVVQVGQ 685 (720)
Q Consensus 607 ~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~l~~~~~~~~~laS~s~D~~v~lWD 685 (720)
...+.+|+++++|.++++...++.|..||..... ....+. ....+.++++.|+ +.+.++...++.|.+||
T Consensus 56 ~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~--------~~~~~~~~~~~~~~i~~~~~-g~l~v~~~~~~~i~~~d 126 (299)
T 2z2n_A 56 DAKVMCLTISSDGEVWFTENAANKIGRITKKGII--------KEYTLPNPDSAPYGITEGPN-GDIWFTEMNGNRIGRIT 126 (299)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTTSCE--------EEEECSSTTCCEEEEEECTT-SCEEEEETTTTEEEEEC
T ss_pred cCceeeEEECCCCCEEEeCCCCCeEEEECCCCcE--------EEEeCCCcCCCceeeEECCC-CCEEEEecCCceEEEEC
Confidence 4679999999999998888778999999965211 011111 2456899999985 46777777789999999
Q ss_pred CCCCcEEEE--------EEEEeecCCceEEEec
Q 004987 686 VLHLIYFSA--------LYCIVLNKLLIIFRYG 710 (720)
Q Consensus 686 ~~tg~~~~~--------~~~v~~~~~~~~~~~~ 710 (720)
. +|+.... +.++++.+.......+
T Consensus 127 ~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~ 158 (299)
T 2z2n_A 127 D-DGKIREYELPNKGSYPSFITLGSDNALWFTE 158 (299)
T ss_dssp T-TCCEEEEECSSTTCCEEEEEECTTSCEEEEE
T ss_pred C-CCCEEEecCCCCCCCCceEEEcCCCCEEEEe
Confidence 9 6654432 5677777665555543
No 476
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=93.95 E-value=0.062 Score=56.06 Aligned_cols=29 Identities=3% Similarity=0.102 Sum_probs=26.8
Q ss_pred cCceeccCCCCcEEEccCCceEEeccCcc
Q 004987 140 QGIVVHNVRPSCFVMSSFNHVSFIESASC 168 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a 168 (720)
.+++|+|++|.|||++.++.+.++||+.+
T Consensus 222 ~~l~HgD~~~~Nil~~~~~~~~lIDfe~a 250 (346)
T 2q83_A 222 PNLCHQDYGTGNTLLGENEQIWVIDLDTV 250 (346)
T ss_dssp CCEECSSCSTTSEEECGGGCEEECCCTTC
T ss_pred CceecCCCCcccEEEeCCCcEEEEehhhc
Confidence 67999999999999988889999999877
No 477
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=93.89 E-value=0.62 Score=48.29 Aligned_cols=92 Identities=10% Similarity=0.010 Sum_probs=60.8
Q ss_pred CCeEEEEECCCCCEE-EEeeCCCcEEEeeCC--cccccccccccceEEecC-CCCeEEEEEecCCCCEEEEEeCCCcEEE
Q 004987 608 NLVCSLSFDRDGELF-AAAGVNKKIKVFECD--AIINENRDIHYPVVEMAS-RSKLSSICWNSYIKSQIASSNFEGVVQV 683 (720)
Q Consensus 608 ~~V~sv~f~~dg~~l-at~~~d~~i~iwd~~--~~~~~~~~~~~~~~~~~~-~~~i~~l~~~~~~~~~laS~s~D~~v~l 683 (720)
...++++|+|||+.| ++.+.++.|.+||+. ++.. ... ...+..+.. ......+++.+++ ++.++...++.|.+
T Consensus 179 ~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~-~~~-~~~~~~~~~~~~~p~gi~~d~~G-~lwva~~~~~~v~~ 255 (326)
T 2ghs_A 179 SIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLP-TGK-AEVFIDSTGIKGGMDGSVCDAEG-HIWNARWGEGAVDR 255 (326)
T ss_dssp SSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCB-SSC-CEEEEECTTSSSEEEEEEECTTS-CEEEEEETTTEEEE
T ss_pred cccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCc-ccC-ceEEEECCCCCCCCCeeEECCCC-CEEEEEeCCCEEEE
Confidence 457899999999865 555667899999975 3200 000 001122221 3456789999854 56666656789999
Q ss_pred EECCCCcEEEE-------EEEEeec-CC
Q 004987 684 GQVLHLIYFSA-------LYCIVLN-KL 703 (720)
Q Consensus 684 WD~~tg~~~~~-------~~~v~~~-~~ 703 (720)
||. +|+.+.. +++++|. +.
T Consensus 256 ~d~-~g~~~~~i~~~~~~~~~~af~g~d 282 (326)
T 2ghs_A 256 YDT-DGNHIARYEVPGKQTTCPAFIGPD 282 (326)
T ss_dssp ECT-TCCEEEEEECSCSBEEEEEEESTT
T ss_pred ECC-CCCEEEEEECCCCCcEEEEEecCC
Confidence 999 6776654 6888997 54
No 478
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=93.65 E-value=0.81 Score=46.52 Aligned_cols=92 Identities=10% Similarity=-0.096 Sum_probs=64.6
Q ss_pred CCCeEEEEECCC-CCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCeEEEEEecCCCCEEEEEeCCCcEEEEE
Q 004987 607 SNLVCSLSFDRD-GELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQ 685 (720)
Q Consensus 607 ~~~V~sv~f~~d-g~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~laS~s~D~~v~lWD 685 (720)
...-.+..|+++ +.++.+...+++|..||..+.. +........+.+++|+|++ +++++. +..|.+||
T Consensus 12 ~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~---------~~~~~~~~~~~~i~~~~dG-~l~v~~--~~~l~~~d 79 (297)
T 3g4e_A 12 CRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQ---------VQRVTMDAPVSSVALRQSG-GYVATI--GTKFCALN 79 (297)
T ss_dssp CSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCC---------EEEEECSSCEEEEEEBTTS-SEEEEE--TTEEEEEE
T ss_pred CccccCCeEECCCCEEEEEECCCCEEEEEECCCCc---------EEEEeCCCceEEEEECCCC-CEEEEE--CCeEEEEE
Confidence 345678999995 5578888889999999987652 1122234579999999965 466554 57899999
Q ss_pred CCCCcEEE-----------EEEEEeecCCceEEEec
Q 004987 686 VLHLIYFS-----------ALYCIVLNKLLIIFRYG 710 (720)
Q Consensus 686 ~~tg~~~~-----------~~~~v~~~~~~~~~~~~ 710 (720)
..+|+... .++.+++.+.......+
T Consensus 80 ~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~ 115 (297)
T 3g4e_A 80 WKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGT 115 (297)
T ss_dssp TTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEE
T ss_pred CCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEec
Confidence 99886432 15667777776655544
No 479
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=93.62 E-value=0.52 Score=48.84 Aligned_cols=90 Identities=9% Similarity=-0.136 Sum_probs=61.6
Q ss_pred CCeEEEEECCCC-CEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCeEEEEEecCCCCEEEEEeCCCcEEEEEC
Q 004987 608 NLVCSLSFDRDG-ELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQV 686 (720)
Q Consensus 608 ~~V~sv~f~~dg-~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~laS~s~D~~v~lWD~ 686 (720)
....+..|+|++ .++.++..++.|.+||..+.. +........+.+++|+|++ .+++++ .+ .|.+||.
T Consensus 49 ~~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~---------~~~~~~~~~v~~i~~~~dg-~l~v~~-~~-gl~~~d~ 116 (326)
T 2ghs_A 49 LLGEGPTFDPASGTAWWFNILERELHELHLASGR---------KTVHALPFMGSALAKISDS-KQLIAS-DD-GLFLRDT 116 (326)
T ss_dssp SBEEEEEEETTTTEEEEEEGGGTEEEEEETTTTE---------EEEEECSSCEEEEEEEETT-EEEEEE-TT-EEEEEET
T ss_pred CCCcCCeEeCCCCEEEEEECCCCEEEEEECCCCc---------EEEEECCCcceEEEEeCCC-eEEEEE-CC-CEEEEEC
Confidence 345788999985 567787788999999987641 1112223579999999964 466654 34 4999999
Q ss_pred CCCcEEE-----------EEEEEeecCCceEEEe
Q 004987 687 LHLIYFS-----------ALYCIVLNKLLIIFRY 709 (720)
Q Consensus 687 ~tg~~~~-----------~~~~v~~~~~~~~~~~ 709 (720)
.+|+... .++++.+.+.......
T Consensus 117 ~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~ 150 (326)
T 2ghs_A 117 ATGVLTLHAELESDLPGNRSNDGRMHPSGALWIG 150 (326)
T ss_dssp TTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEE
T ss_pred CCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEE
Confidence 8887432 2567777776655443
No 480
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=93.58 E-value=0.11 Score=56.61 Aligned_cols=84 Identities=5% Similarity=0.022 Sum_probs=57.8
Q ss_pred EEEECCCCCE-EEEee---------CCCcEEEeeCCcccccccccccceEEecCCCCeEEEEEecCCCCEEEEEe-CCCc
Q 004987 612 SLSFDRDGEL-FAAAG---------VNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSN-FEGV 680 (720)
Q Consensus 612 sv~f~~dg~~-lat~~---------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~laS~s-~D~~ 680 (720)
.++|+|||.. +++.+ .+++|-|+|..+.. .+..+.-...-..+.|+|+++.+|+++. .+++
T Consensus 323 ~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~k--------vv~~I~vg~~P~gia~spDg~~~lyv~n~~s~~ 394 (426)
T 3c75_H 323 QTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGE--------RINKIELGHEIDSINVSQDAEPLLYALSAGTQT 394 (426)
T ss_dssp CEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCC--------EEEEEEEEEEECEEEECCSSSCEEEEEETTTTE
T ss_pred eeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCe--------EEEEEECCCCcCeEEEccCCCEEEEEEcCCCCe
Confidence 3689999875 34322 24689999988762 2223222224789999997654788888 4999
Q ss_pred EEEEECCCCcEEEEEEEEeecCC
Q 004987 681 VQVGQVLHLIYFSALYCIVLNKL 703 (720)
Q Consensus 681 v~lWD~~tg~~~~~~~~v~~~~~ 703 (720)
|.|+|+.|++.+++|--+.-.|.
T Consensus 395 VsVID~~t~kvv~tI~~vG~~P~ 417 (426)
T 3c75_H 395 LHIYDAATGEELRSVDQLGRGPQ 417 (426)
T ss_dssp EEEEETTTCCEEEEECCCSSSCC
T ss_pred EEEEECCCCCEEEEecCCCCCCc
Confidence 99999999999988633333333
No 481
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=93.05 E-value=0.18 Score=55.11 Aligned_cols=93 Identities=17% Similarity=0.120 Sum_probs=64.8
Q ss_pred cccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEee----------CCCcEEEeeCCcccccccccccceEEe--cC
Q 004987 588 SFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAG----------VNKKIKVFECDAIINENRDIHYPVVEM--AS 655 (720)
Q Consensus 588 ~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~----------~d~~i~iwd~~~~~~~~~~~~~~~~~~--~~ 655 (720)
.-.++++++++.-|. .. .++|+|||+++..+. .+++|-++|..+.. .+.++ .+
T Consensus 105 D~~t~~vv~~I~vG~-----~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~--------vv~~I~v~g 169 (426)
T 3c75_H 105 DGSTGRILGMTDGGF-----LP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFL--------PIADIELPD 169 (426)
T ss_dssp ETTTTEEEEEEEECS-----SC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCC--------EEEEEEETT
T ss_pred ECCCCEEEEEEECCC-----CC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCc--------EEEEEECCC
Confidence 346788999998642 23 799999999765554 47799999988762 22222 10
Q ss_pred ------CCCeEEEEEecCCCCEEEEEeC--CCcEEEEECCCCcEEEEEE
Q 004987 656 ------RSKLSSICWNSYIKSQIASSNF--EGVVQVGQVLHLIYFSALY 696 (720)
Q Consensus 656 ------~~~i~~l~~~~~~~~~laS~s~--D~~v~lWD~~tg~~~~~~~ 696 (720)
...-..+.|+|+++ +|..+.. +++|.|.|+.+++.+.+|.
T Consensus 170 ~~r~~~g~~P~~~~~spDGk-~lyV~n~~~~~~VsVID~~t~kvv~~I~ 217 (426)
T 3c75_H 170 APRFLVGTYQWMNALTPDNK-NLLFYQFSPAPAVGVVDLEGKTFDRMLD 217 (426)
T ss_dssp CCCCCBSCCGGGSEECTTSS-EEEEEECSSSCEEEEEETTTTEEEEEEE
T ss_pred ccccccCCCcceEEEcCCCC-EEEEEecCCCCeEEEEECCCCeEEEEEE
Confidence 11234678999655 6665553 6899999999999988743
No 482
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=92.93 E-value=0.46 Score=49.61 Aligned_cols=100 Identities=7% Similarity=0.023 Sum_probs=61.3
Q ss_pred CeEEEEECCCCCEEEEeeCCCcEEEeeCCcc--cccc---cccccceEEecCCCCeEEEEEecCCCCEEEEEeCCCcEEE
Q 004987 609 LVCSLSFDRDGELFAAAGVNKKIKVFECDAI--INEN---RDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQV 683 (720)
Q Consensus 609 ~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~--~~~~---~~~~~~~~~~~~~~~i~~l~~~~~~~~~laS~s~D~~v~l 683 (720)
.++.|+|+|||++|..+..++. +||.+.+. .... ......+....+......++++++ +++.++...++.|.+
T Consensus 196 ~~~gia~s~dg~~ly~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~-G~l~va~~~~~~V~~ 273 (343)
T 2qe8_A 196 GVNGIVLDAENEWLYLSPMHST-SMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKD-HNIYVGDLAHSAIGV 273 (343)
T ss_dssp CEEEEEECTTSCEEEEEESSCS-EEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTT-CCEEEEEGGGTEEEE
T ss_pred ccceeEeccCCCEEEEEeCCCC-eEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCC-CCEEEEccCCCeEEE
Confidence 4789999999998777776653 55544321 1000 000011122222334567899995 578888888999999
Q ss_pred EECCCCcEEEE--------EEEEeecCCceEEEec
Q 004987 684 GQVLHLIYFSA--------LYCIVLNKLLIIFRYG 710 (720)
Q Consensus 684 WD~~tg~~~~~--------~~~v~~~~~~~~~~~~ 710 (720)
||..+|+.... ..+++|.+....+...
T Consensus 274 ~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~ 308 (343)
T 2qe8_A 274 ITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDC 308 (343)
T ss_dssp EETTTTEEEEEEECGGGSCEEEEEECTTSCEEEEE
T ss_pred EECCCCCEEEEEECCceecCCeeEECCCCcEEEEe
Confidence 99967763221 4678887665554443
No 483
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=92.92 E-value=0.16 Score=59.05 Aligned_cols=59 Identities=5% Similarity=-0.102 Sum_probs=40.3
Q ss_pred CcEEEeeCCcccccccccccceEEecCCCCeEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEEEE
Q 004987 629 KKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSALY 696 (720)
Q Consensus 629 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~laS~s~D~~v~lWD~~tg~~~~~~~ 696 (720)
++|..||+.++. .+........+....+... +.+++.++.||.|++||+.||+.+.++.
T Consensus 457 g~l~A~D~~tG~--------~~W~~~~~~~~~~g~~~~~-g~~v~~g~~dg~l~a~D~~tG~~lw~~~ 515 (677)
T 1kb0_A 457 GRLLAWDPVAQK--------AAWSVEHVSPWNGGTLTTA-GNVVFQGTADGRLVAYHAATGEKLWEAP 515 (677)
T ss_dssp EEEEEEETTTTE--------EEEEEEESSSCCCCEEEET-TTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred cEEEEEeCCCCc--------EEeecCCCCCCcCcceEeC-CCEEEEECCCCcEEEEECCCCceeeeee
Confidence 789999987762 2333322223333344443 4578888999999999999999988743
No 484
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=92.90 E-value=0.65 Score=46.93 Aligned_cols=91 Identities=9% Similarity=0.148 Sum_probs=56.4
Q ss_pred cceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCC--cEEEeeCCcccccccccccceEEecCCCCe--EEEEEe
Q 004987 590 SKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNK--KIKVFECDAIINENRDIHYPVVEMASRSKL--SSICWN 665 (720)
Q Consensus 590 ~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i--~~l~~~ 665 (720)
...+|+++..| +.....-.+.|+ |+.++.++|.++ +|+++|+.++. .+..+.-.... -.+...
T Consensus 29 ~~~~vv~~~ph----d~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgk--------v~~~~~l~~~~FgeGit~~ 95 (262)
T 3nol_A 29 YDYQIVHSYPH----DTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGK--------TLQQIELGKRYFGEGISDW 95 (262)
T ss_dssp EEEEEEEEEEC----CTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCC--------EEEEEECCTTCCEEEEEEE
T ss_pred cceEEEEEecC----CCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCc--------EEEEEecCCccceeEEEEe
Confidence 35688888876 234567889999 788888888877 99999998862 11111111112 223332
Q ss_pred cCCCCEEEEEeCCCcEEEEECCCCcEEEEE
Q 004987 666 SYIKSQIASSNFEGVVQVGQVLHLIYFSAL 695 (720)
Q Consensus 666 ~~~~~~laS~s~D~~v~lWD~~tg~~~~~~ 695 (720)
+..+....-.++++-++|..|++.+.++
T Consensus 96 --g~~ly~ltw~~~~v~v~D~~t~~~~~ti 123 (262)
T 3nol_A 96 --KDKIVGLTWKNGLGFVWNIRNLRQVRSF 123 (262)
T ss_dssp --TTEEEEEESSSSEEEEEETTTCCEEEEE
T ss_pred --CCEEEEEEeeCCEEEEEECccCcEEEEE
Confidence 2222223334777777787777777764
No 485
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=92.83 E-value=0.84 Score=46.54 Aligned_cols=92 Identities=5% Similarity=-0.071 Sum_probs=64.5
Q ss_pred CCCeEEEEECCCCC-EEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCeEEEEEecCCCCEEEEEeCCCcEEEEE
Q 004987 607 SNLVCSLSFDRDGE-LFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQ 685 (720)
Q Consensus 607 ~~~V~sv~f~~dg~-~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~laS~s~D~~v~lWD 685 (720)
..+..+..|+|||+ ++.++..++.|..||..... .........+..++|+|++ .++++...++.|.+||
T Consensus 44 ~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~g~~---------~~~~~~~~~~~gl~~d~dG-~l~v~~~~~~~v~~~~ 113 (305)
T 3dr2_A 44 ATWSEGPAWWEAQRTLVWSDLVGRRVLGWREDGTV---------DVLLDATAFTNGNAVDAQQ-RLVHCEHGRRAITRSD 113 (305)
T ss_dssp CSSEEEEEEEGGGTEEEEEETTTTEEEEEETTSCE---------EEEEESCSCEEEEEECTTS-CEEEEETTTTEEEEEC
T ss_pred CcCccCCeEeCCCCEEEEEECCCCEEEEEeCCCCE---------EEEeCCCCccceeeECCCC-CEEEEECCCCEEEEEC
Confidence 56788999999998 67888888999999863211 1111234568999999954 5666665668999999
Q ss_pred CCCCcEEEE-----------EEEEeecCCceEEEe
Q 004987 686 VLHLIYFSA-----------LYCIVLNKLLIIFRY 709 (720)
Q Consensus 686 ~~tg~~~~~-----------~~~v~~~~~~~~~~~ 709 (720)
.. |+...- ++.+++.+...+..+
T Consensus 114 ~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~t 147 (305)
T 3dr2_A 114 AD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFT 147 (305)
T ss_dssp TT-SCEEEEECEETTEECSCCCCEEECTTSCEEEE
T ss_pred CC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEe
Confidence 86 653221 345778887777764
No 486
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=92.77 E-value=0.073 Score=56.79 Aligned_cols=67 Identities=3% Similarity=-0.086 Sum_probs=41.5
Q ss_pred CCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCeEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE
Q 004987 618 DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA 694 (720)
Q Consensus 618 dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~laS~s~D~~v~lWD~~tg~~~~~ 694 (720)
++.++++|+.|++|..||..++. .+..... +.+.+..+.+. +.++++++.||.|..||..||+.+..
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~--------~~W~~~~-~~~~s~p~~~~-g~~~v~~s~dg~l~a~d~~tG~~~w~ 74 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGS--------IKWTLKE-DPVLQVPTHVE-EPAFLPDPNDGSLYTLGSKNNEGLTK 74 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCC--------EEEEEEC-CCSCCCC------CCEEECTTTCCEEEC-----CCSEE
T ss_pred eCCEEEEEcCCCEEEEEECCCCC--------EEEEecC-CCceecceEcC-CCEEEEeCCCCEEEEEECCCCceeee
Confidence 67889999999999999988772 3333333 33444444443 34778888999999999999987543
No 487
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=92.46 E-value=1.9 Score=42.87 Aligned_cols=94 Identities=12% Similarity=-0.024 Sum_probs=66.1
Q ss_pred CCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCeEEEEEecCCCCEEEEEeCCCcEEEEE
Q 004987 607 SNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEGVVQVGQ 685 (720)
Q Consensus 607 ~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~l~~~~~~~~~laS~s~D~~v~lWD 685 (720)
...+.+|+++++|.++++...++.|.+||.. .... ...+. ....+.++++.++ +++.++...++.|.+||
T Consensus 19 ~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~-------~~~~~~~~~~~~~i~~~~~-g~l~v~~~~~~~v~~~d 89 (300)
T 2qc5_A 19 DSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIK-------EFEVPTPDAKVMCLIVSSL-GDIWFTENGANKIGKLS 89 (300)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEE-------EEECSSTTCCEEEEEECTT-SCEEEEETTTTEEEEEC
T ss_pred CCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceE-------EEECCCCCCcceeEEECCC-CCEEEEecCCCeEEEEC
Confidence 4678999999999998888788999999976 3100 01111 2356899999985 45777666688999999
Q ss_pred CCCCcEEEE--------EEEEeecCCceEEEec
Q 004987 686 VLHLIYFSA--------LYCIVLNKLLIIFRYG 710 (720)
Q Consensus 686 ~~tg~~~~~--------~~~v~~~~~~~~~~~~ 710 (720)
.. |+...- ++++++.+.......+
T Consensus 90 ~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~ 121 (300)
T 2qc5_A 90 KK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQ 121 (300)
T ss_dssp TT-SCEEEEECSSTTCCEEEEEECSTTCEEEEE
T ss_pred CC-CCeEEecCCCCCCCCccceECCCCCEEEEc
Confidence 88 664321 5677777666555544
No 488
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=91.98 E-value=0.19 Score=53.82 Aligned_cols=85 Identities=11% Similarity=-0.004 Sum_probs=58.9
Q ss_pred cccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEee----------CCCcEEEeeCCcccccccccccceEEecCC-
Q 004987 588 SFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAG----------VNKKIKVFECDAIINENRDIHYPVVEMASR- 656 (720)
Q Consensus 588 ~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~----------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~- 656 (720)
.-.++++++++.-|. .. .++|+|||+++..+. .+++|.+||..+.. .+.++.-.
T Consensus 52 D~~t~~v~~~i~vG~-----~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~--------vv~~I~v~~ 116 (368)
T 1mda_H 52 CAGCGVTLGHSLGAF-----LS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFL--------PIADIELPD 116 (368)
T ss_dssp ETTTTEEEEEEEECT-----TC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCC--------EEEEEEETT
T ss_pred ECCCCeEEEEEeCCC-----CC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCC--------EEEEEECCC
Confidence 446788999988542 23 699999999766664 47899999998862 33332110
Q ss_pred -------CCeEEEEEecCCCCEEEEEeC--CCcEEE--EECCC
Q 004987 657 -------SKLSSICWNSYIKSQIASSNF--EGVVQV--GQVLH 688 (720)
Q Consensus 657 -------~~i~~l~~~~~~~~~laS~s~--D~~v~l--WD~~t 688 (720)
..-..+.++|+++ +|+.+.+ +..|.| ||+.+
T Consensus 117 ~~~~~~g~~P~~ia~SpDGk-~lyVan~~~~~~v~V~~iD~~t 158 (368)
T 1mda_H 117 APRFSVGPRVHIIGNCASSA-CLLFFLFGSSAAAGLSVPGASD 158 (368)
T ss_dssp SCSCCBSCCTTSEEECTTSS-CEEEEECSSSCEEEEEETTTEE
T ss_pred ccccccCCCcceEEEcCCCC-EEEEEccCCCCeEEEEEEchhh
Confidence 1245789999765 5665554 467999 99987
No 489
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=91.89 E-value=0.37 Score=51.80 Aligned_cols=76 Identities=7% Similarity=0.015 Sum_probs=53.8
Q ss_pred EEEECCCCCEEEEee----------CCCcEEEeeCCcccccccccccceEEecCCCCeEEEEEecCCCCEEEEE-eCCCc
Q 004987 612 SLSFDRDGELFAAAG----------VNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASS-NFEGV 680 (720)
Q Consensus 612 sv~f~~dg~~lat~~----------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~laS~-s~D~~ 680 (720)
.++++|++..+..+- -..+|-+.|+.+.. -+..+.-...+..|.++|+.+.+|.++ ..+++
T Consensus 284 ~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~k--------v~~~i~vg~~~~~lavs~D~~~~ly~tn~~~~~ 355 (386)
T 3sjl_D 284 QVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGE--------RLAKFEMGHEIDSINVSQDEKPLLYALSTGDKT 355 (386)
T ss_dssp CEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCC--------EEEEEEEEEEECEEEECSSSSCEEEEEETTTTE
T ss_pred eeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCe--------EEEEEECCCCcceEEECCCCCeEEEEEcCCCCe
Confidence 577899998543332 13578899987762 222222223578999999876666665 45999
Q ss_pred EEEEECCCCcEEEEE
Q 004987 681 VQVGQVLHLIYFSAL 695 (720)
Q Consensus 681 v~lWD~~tg~~~~~~ 695 (720)
|.|+|+.|++.+.++
T Consensus 356 VsViD~~t~k~~~~i 370 (386)
T 3sjl_D 356 LYIHDAESGEELRSV 370 (386)
T ss_dssp EEEEETTTCCEEEEE
T ss_pred EEEEECCCCcEEEEe
Confidence 999999999999885
No 490
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=91.21 E-value=1.5 Score=44.27 Aligned_cols=91 Identities=8% Similarity=0.078 Sum_probs=56.3
Q ss_pred ceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCeEEEEEecCCCC
Q 004987 591 KLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKS 670 (720)
Q Consensus 591 ~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~ 670 (720)
..+++++..| +.......+.|+ ++.++.+.|.++.|+++|++++.-. ..+ +.....--.+.... ..
T Consensus 42 ~~~Vv~~~ph----d~~~ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~-----~~~--l~~~~FgeGit~~g--~~ 107 (268)
T 3nok_A 42 VAHIIREYPH----ATNAFTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPV-----WME--RLGNIFAEGLASDG--ER 107 (268)
T ss_dssp EEEEEEEEEC----CTTCCEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCS-----EEE--ECTTCCEEEEEECS--SC
T ss_pred ceEEEEEEcC----CCccccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEE-----eEE--CCCCcceeEEEEeC--CE
Confidence 3467777765 224567789998 5788899999999999999886211 011 22111112244432 23
Q ss_pred EEEEEeCCCcEEEEECCCCcEEEEE
Q 004987 671 QIASSNFEGVVQVGQVLHLIYFSAL 695 (720)
Q Consensus 671 ~laS~s~D~~v~lWD~~tg~~~~~~ 695 (720)
+....-.+++|.++|..|++.+.++
T Consensus 108 Ly~ltw~~~~v~V~D~~Tl~~~~ti 132 (268)
T 3nok_A 108 LYQLTWTEGLLFTWSGMPPQRERTT 132 (268)
T ss_dssp EEEEESSSCEEEEEETTTTEEEEEE
T ss_pred EEEEEccCCEEEEEECCcCcEEEEE
Confidence 3344445778888888888877764
No 491
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=91.06 E-value=0.47 Score=55.64 Aligned_cols=90 Identities=10% Similarity=-0.088 Sum_probs=57.5
Q ss_pred CeEEEEEC-CCCCEEEEeeC-----CCcEEEeeCCcc-cccccccccceEEecCCCCeEEEEEecCCCCEEEEEeCC---
Q 004987 609 LVCSLSFD-RDGELFAAAGV-----NKKIKVFECDAI-INENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFE--- 678 (720)
Q Consensus 609 ~V~sv~f~-~dg~~lat~~~-----d~~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~laS~s~D--- 678 (720)
.+.+.+|| |||++||-+.. ..+|+|+|+.++ .. .. ..+.. ....++|+|+++ .|+-.++|
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~--l~--~~~~~-----~~~~~~WspDg~-~l~y~~~d~~~ 244 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQT--IA--DKVSG-----TNGEIVWGPDHT-SLFYVTKDETL 244 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCC--CC--CCEEE-----ECSCCEECSSTT-EEEEEEECTTC
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEe--CC--ccccC-----ceeeEEEecCCC-EEEEEEECCCC
Confidence 57889999 99998884432 236999998776 31 10 11111 135789999765 55555555
Q ss_pred --CcEEEEECCCCc----EEEE------EEEEeecCCceEEE
Q 004987 679 --GVVQVGQVLHLI----YFSA------LYCIVLNKLLIIFR 708 (720)
Q Consensus 679 --~~v~lWD~~tg~----~~~~------~~~v~~~~~~~~~~ 708 (720)
..|.+|++.+++ .+.+ ...+.|++....+.
T Consensus 245 ~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~ 286 (751)
T 2xe4_A 245 RENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLC 286 (751)
T ss_dssp CEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEE
T ss_pred CCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEE
Confidence 358888998875 2321 45678888775444
No 492
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=90.94 E-value=4.3 Score=40.46 Aligned_cols=90 Identities=12% Similarity=0.069 Sum_probs=52.9
Q ss_pred ceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCC--cEEEeeCCcccccccccccceEEecCCCCe--EEEEEec
Q 004987 591 KLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNK--KIKVFECDAIINENRDIHYPVVEMASRSKL--SSICWNS 666 (720)
Q Consensus 591 ~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i--~~l~~~~ 666 (720)
..+++++..| .....+-.+.|++ +.++.|.|.++ +|+++|+.++.- +....-.... -.+...
T Consensus 8 ~~~v~~~~ph----d~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv--------~~~~~l~~~~fgeGi~~~- 73 (243)
T 3mbr_X 8 GYRVVKRYPH----DTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRI--------LQRAEVPPPYFGAGIVAW- 73 (243)
T ss_dssp CEEEEEEEEC----CTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCE--------EEEEECCTTCCEEEEEEE-
T ss_pred ceEEEEEcCC----CCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCE--------EEEEeCCCCcceeEEEEe-
Confidence 4578888876 2356678899997 77788888764 999999987621 1111111111 122222
Q ss_pred CCCCEEEEEeCCCcEEEEECCCCcEEEEE
Q 004987 667 YIKSQIASSNFEGVVQVGQVLHLIYFSAL 695 (720)
Q Consensus 667 ~~~~~laS~s~D~~v~lWD~~tg~~~~~~ 695 (720)
+..+....-.++++-++|..|.+.+.++
T Consensus 74 -~~~ly~ltw~~~~v~v~D~~tl~~~~ti 101 (243)
T 3mbr_X 74 -RDRLIQLTWRNHEGFVYDLATLTPRARF 101 (243)
T ss_dssp -TTEEEEEESSSSEEEEEETTTTEEEEEE
T ss_pred -CCEEEEEEeeCCEEEEEECCcCcEEEEE
Confidence 1222333334667777777777766663
No 493
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=90.91 E-value=3.3 Score=40.94 Aligned_cols=94 Identities=10% Similarity=-0.111 Sum_probs=65.9
Q ss_pred CCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCeEEEEEecCCCCEEEEEeCCCcEEEEE
Q 004987 607 SNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEGVVQVGQ 685 (720)
Q Consensus 607 ~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~l~~~~~~~~~laS~s~D~~v~lWD 685 (720)
...+.+++++++|.++++...++.|.+||.. ... ....+. ....+.++++.++ +.+.++...++.|..||
T Consensus 61 ~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~-------~~~~~~~~~~~~~~i~~~~~-g~l~v~~~~~~~i~~~~ 131 (300)
T 2qc5_A 61 DAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGF-------TEYPLPQPDSGPYGITEGLN-GDIWFTQLNGDRIGKLT 131 (300)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE-------EEEECSSTTCCEEEEEECST-TCEEEEETTTTEEEEEC
T ss_pred CCcceeEEECCCCCEEEEecCCCeEEEECCC-CCe-------EEecCCCCCCCCccceECCC-CCEEEEccCCCeEEEEC
Confidence 4678999999999988887778999999976 310 011111 2356899999985 45777766688999999
Q ss_pred CCCCcEEEE--------EEEEeecCCceEEEec
Q 004987 686 VLHLIYFSA--------LYCIVLNKLLIIFRYG 710 (720)
Q Consensus 686 ~~tg~~~~~--------~~~v~~~~~~~~~~~~ 710 (720)
.. |+.... .+++++.+.......+
T Consensus 132 ~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~ 163 (300)
T 2qc5_A 132 AD-GTIYEYDLPNKGSYPAFITLGSDNALWFTE 163 (300)
T ss_dssp TT-SCEEEEECSSTTCCEEEEEECTTSSEEEEE
T ss_pred CC-CCEEEccCCCCCCCceeEEECCCCCEEEEe
Confidence 87 665431 5677777666555444
No 494
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=90.86 E-value=0.27 Score=57.09 Aligned_cols=58 Identities=7% Similarity=-0.077 Sum_probs=39.1
Q ss_pred CCcEEEeeCCcccccccccccceEEecCCCCeEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE
Q 004987 628 NKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA 694 (720)
Q Consensus 628 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~laS~s~D~~v~lWD~~tg~~~~~ 694 (720)
+++|+.||+.++. .+........+..-.+.. .+++|+.++.||.|+.||..||+.+-+
T Consensus 454 ~g~l~A~D~~tG~--------~~W~~~~~~~~~~g~~~t-agglvf~gt~dg~l~a~D~~tG~~lw~ 511 (689)
T 1yiq_A 454 SGKLIAWDPVKQQ--------AAWEVPYVTIFNGGTLST-AGNLVFEGSADGRVIAYAADTGEKLWE 511 (689)
T ss_dssp EEEEEEEETTTTE--------EEEEEEESSSCCCCEEEE-TTTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred ceeEEEEECCCCC--------eEeEccCCCCccCccceE-CCCEEEEECCCCcEEEEECCCCcccee
Confidence 4778889987762 222222222222224444 346899999999999999999999865
No 495
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=90.79 E-value=0.31 Score=56.86 Aligned_cols=73 Identities=12% Similarity=0.108 Sum_probs=49.9
Q ss_pred EEEEECCCCCEEEEeeCCCc--------------EEEeeCCcccccccccccceEEecC-CCCeEEEEEecCCCCEEEEE
Q 004987 611 CSLSFDRDGELFAAAGVNKK--------------IKVFECDAIINENRDIHYPVVEMAS-RSKLSSICWNSYIKSQIASS 675 (720)
Q Consensus 611 ~sv~f~~dg~~lat~~~d~~--------------i~iwd~~~~~~~~~~~~~~~~~~~~-~~~i~~l~~~~~~~~~laS~ 675 (720)
.+++|+|| +.|+.++.|+. |++|++.+..... ..+.+... ...+..+.|+|++ .+|+.+
T Consensus 212 ~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~----~lv~~~~~~~~~~~~~~~SpDG-~~l~~~ 285 (741)
T 1yr2_A 212 SGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSAD----QPVFATPELPKRGHGASVSSDG-RWVVIT 285 (741)
T ss_dssp CCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGC----EEEECCTTCTTCEEEEEECTTS-CEEEEE
T ss_pred ccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhC----EEEeccCCCCeEEEEEEECCCC-CEEEEE
Confidence 57899999 99988887765 8999986552110 01111111 2358899999965 567766
Q ss_pred eCCC-----cEEEEECCCC
Q 004987 676 NFEG-----VVQVGQVLHL 689 (720)
Q Consensus 676 s~D~-----~v~lWD~~tg 689 (720)
+.++ .|.+||+.++
T Consensus 286 ~~~~~~~~~~l~~~d~~~~ 304 (741)
T 1yr2_A 286 SSEGTDPVNTVHVARVTNG 304 (741)
T ss_dssp EECTTCSCCEEEEEEEETT
T ss_pred EEccCCCcceEEEEECCCC
Confidence 6544 8999999887
No 496
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=90.69 E-value=1.1 Score=48.29 Aligned_cols=92 Identities=5% Similarity=-0.061 Sum_probs=59.8
Q ss_pred EEECCCCCEEEEeeCCC--cEEEeeCCcccccccccccceEEe-c-CCCCeEEEEEecCCCCEEEEEeCCCcEEEEECCC
Q 004987 613 LSFDRDGELFAAAGVNK--KIKVFECDAIINENRDIHYPVVEM-A-SRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLH 688 (720)
Q Consensus 613 v~f~~dg~~lat~~~d~--~i~iwd~~~~~~~~~~~~~~~~~~-~-~~~~i~~l~~~~~~~~~laS~s~D~~v~lWD~~t 688 (720)
++|+++|++|..+..++ +|.+||...... .. .+..+ . ......+++++|.++. |..++.++.|..||..+
T Consensus 176 ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~-~~----~~g~~~~~~~~~p~~iav~p~~g~-lyv~d~~~~I~~~d~~~ 249 (409)
T 3hrp_A 176 PAVTKDKQRVYSIGWEGTHTVYVYMKASGWA-PT----RIGQLGSTFSGKIGAVALDETEEW-LYFVDSNKNFGRFNVKT 249 (409)
T ss_dssp CEECTTSSEEEEEBSSTTCEEEEEEGGGTTC-EE----EEEECCTTSCSCCCBCEECTTSSE-EEEECTTCEEEEEETTT
T ss_pred eeEecCCCcEEEEecCCCceEEEEEcCCCce-eE----EeeeccchhcCCcEEEEEeCCCCe-EEEEECCCcEEEEECCC
Confidence 99999999888887766 788888644310 00 00011 1 2345788999996554 44477899999999988
Q ss_pred CcEEEEE-------------E-EEeecC-CceEEEecC
Q 004987 689 LIYFSAL-------------Y-CIVLNK-LLIIFRYGM 711 (720)
Q Consensus 689 g~~~~~~-------------~-~v~~~~-~~~~~~~~~ 711 (720)
+.... + + .++|++ ....+..+.
T Consensus 250 ~~~~~-~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~ 286 (409)
T 3hrp_A 250 QEVTL-IKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQ 286 (409)
T ss_dssp CCEEE-EEECCCCSCCCCSSCCEEEEETTTTEEEEEET
T ss_pred CCEEE-EecccccCCCCCCccccEEEeCCCCEEEEEeC
Confidence 86322 2 2 677877 355555544
No 497
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=90.55 E-value=0.15 Score=55.39 Aligned_cols=30 Identities=7% Similarity=0.210 Sum_probs=26.5
Q ss_pred HHcCceeccCCCCcEEEccCCceEEeccCcc
Q 004987 138 HSQGIVVHNVRPSCFVMSSFNHVSFIESASC 168 (720)
Q Consensus 138 Hs~gIvHrDLKP~NILl~~~~~vkliDfg~a 168 (720)
+...++|+|++|.|||++.++ +.+|||+.+
T Consensus 230 ~~~~liHGDl~~~Nil~~~~~-~~lID~e~a 259 (420)
T 2pyw_A 230 RAQALIHGDLHTGSVMVTQDS-TQVIDPEFS 259 (420)
T ss_dssp BCCEEECSCCSGGGEEECSSC-EEECCCTTC
T ss_pred CCCeEEecCCCCCcEEEeCCC-CEEEeCccc
Confidence 357899999999999998766 999999887
No 498
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=90.12 E-value=1.3 Score=45.19 Aligned_cols=73 Identities=10% Similarity=-0.004 Sum_probs=48.4
Q ss_pred CCeEEEEECCCCCEEEE----eeC-------------CCcEEEeeCCcccccccccccceEEecCCCCeEEEEEecCCCC
Q 004987 608 NLVCSLSFDRDGELFAA----AGV-------------NKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKS 670 (720)
Q Consensus 608 ~~V~sv~f~~dg~~lat----~~~-------------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~ 670 (720)
+.+++++++|||.+++| |.. .+.|..||..++.. . .+. .-.....++|+|++ .
T Consensus 131 ~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~-----~-~~~---~~~~p~gl~~spdg-~ 200 (305)
T 3dr2_A 131 NSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPL-----Q-RMA---DLDHPNGLAFSPDE-Q 200 (305)
T ss_dssp SCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCC-----E-EEE---EESSEEEEEECTTS-S
T ss_pred CCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcE-----E-EEe---cCCCCcceEEcCCC-C
Confidence 55788999999999887 432 24577777644310 0 011 22346789999965 4
Q ss_pred EEEEEeCC------CcEEEEECCCCc
Q 004987 671 QIASSNFE------GVVQVGQVLHLI 690 (720)
Q Consensus 671 ~laS~s~D------~~v~lWD~~tg~ 690 (720)
.|+.++.+ +.|.+||+..+.
T Consensus 201 ~lyv~~~~~~~~~~~~i~~~~~~~~~ 226 (305)
T 3dr2_A 201 TLYVSQTPEQGHGSVEITAFAWRDGA 226 (305)
T ss_dssp EEEEEECCC---CCCEEEEEEEETTE
T ss_pred EEEEEecCCcCCCCCEEEEEEecCCC
Confidence 56666554 789999998765
No 499
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=89.36 E-value=0.59 Score=52.79 Aligned_cols=79 Identities=13% Similarity=0.032 Sum_probs=55.2
Q ss_pred CeEEEEECCCCCE-EEEeeCCCcEEEeeCCccc---ccccccccce-EEecCCCCeEEEEEecCCCCEEEEEeCCCcEEE
Q 004987 609 LVCSLSFDRDGEL-FAAAGVNKKIKVFECDAII---NENRDIHYPV-VEMASRSKLSSICWNSYIKSQIASSNFEGVVQV 683 (720)
Q Consensus 609 ~V~sv~f~~dg~~-lat~~~d~~i~iwd~~~~~---~~~~~~~~~~-~~~~~~~~i~~l~~~~~~~~~laS~s~D~~v~l 683 (720)
...+|.|+|||++ ++++..+.+|-|+|+++.. ....+....+ .++.-...-.-++|+|++ ....+.--|++|.+
T Consensus 278 ~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~dG-~aY~t~~ldsqV~k 356 (595)
T 1fwx_A 278 NPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFDGRG-NAYTSLFLDSQVVK 356 (595)
T ss_dssp SCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEECTTS-EEEEEETTTTEEEE
T ss_pred CceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcceEEECCCC-eEEEEEecCCcEEE
Confidence 4568999999996 7777889999999998641 1111111222 233334456889999965 55556668999999
Q ss_pred EECCC
Q 004987 684 GQVLH 688 (720)
Q Consensus 684 WD~~t 688 (720)
||+.+
T Consensus 357 wdi~~ 361 (595)
T 1fwx_A 357 WNIED 361 (595)
T ss_dssp EEHHH
T ss_pred EEhhH
Confidence 99987
No 500
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=89.05 E-value=3.9 Score=41.55 Aligned_cols=88 Identities=13% Similarity=0.085 Sum_probs=59.2
Q ss_pred ccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCeEEEEEecCC
Q 004987 589 FSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYI 668 (720)
Q Consensus 589 ~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~ 668 (720)
....++++.+.. .....+++|+++|.++++-..+++|..||..... ............+++.+++
T Consensus 19 ~~~~~~~~~~p~------~~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~---------~~~~~~~~~p~gia~~~dG 83 (306)
T 2p4o_A 19 LAPAKIITSFPV------NTFLENLASAPDGTIFVTNHEVGEIVSITPDGNQ---------QIHATVEGKVSGLAFTSNG 83 (306)
T ss_dssp CCCEEEEEEECT------TCCEEEEEECTTSCEEEEETTTTEEEEECTTCCE---------EEEEECSSEEEEEEECTTS
T ss_pred CCCceEeEeCCC------CCCcceEEECCCCCEEEEeCCCCeEEEECCCCce---------EEEEeCCCCceeEEEcCCC
Confidence 455778888764 3568899999999988888788999999975431 1111223458899999965
Q ss_pred CCEEEEEe-CCC-cEEEEECCCCcEE
Q 004987 669 KSQIASSN-FEG-VVQVGQVLHLIYF 692 (720)
Q Consensus 669 ~~~laS~s-~D~-~v~lWD~~tg~~~ 692 (720)
. ++++.. .++ .|..+|..+|+..
T Consensus 84 ~-l~vad~~~~~~~v~~~d~~~g~~~ 108 (306)
T 2p4o_A 84 D-LVATGWNADSIPVVSLVKSDGTVE 108 (306)
T ss_dssp C-EEEEEECTTSCEEEEEECTTSCEE
T ss_pred c-EEEEeccCCcceEEEEcCCCCeEE
Confidence 4 544433 233 3656687888743
Done!