BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004989
(720 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 97/264 (36%), Gaps = 92/264 (34%)
Query: 106 SLRQWL------DKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPS--CFVMSSF 157
+L+ W+ ++ +RSV CLHIF QI E V HS+G++ +++PS F M
Sbjct: 101 NLKDWMNGRCTIEERERSV----CLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDV 156
Query: 158 NHVSFIEXXXXXXXXXXXHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217
V D LVTA
Sbjct: 157 VKVG-----------------------------------------------DFGLVTAMD 169
Query: 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWY 277
D E + + AY H V T Y
Sbjct: 170 QDEEEQTVLTPMPAYARHTGQVG---------------------------------TKLY 196
Query: 278 ASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRVLPPQLLLKFPKE 337
SPE++ G S DI+ LG++LFEL PFST E+ RT++ +R+ PP K+P E
Sbjct: 197 MSPEQIHGNSYSHKVDIFSLGLILFELLYPFSTQMERVRTLTDVRNLKFPPLFTQKYPCE 256
Query: 338 ASFCLWLLHPEPSGRPKMGELLQS 361
+L P P RP+ ++++
Sbjct: 257 YVMVQDMLSPSPMERPEAINIIEN 280
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 87/241 (36%), Gaps = 82/241 (34%)
Query: 123 CLHIFRQIVEIVYAAHSQGIVVHNVRPS--CFVMSSFNHVSFIEXXXXXXXXXXXHEEGL 180
CLHIF QI E V HS+G++ +++PS F M V
Sbjct: 166 CLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVG------------------- 206
Query: 181 NTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVE 240
D LVTA D E + + AY TH V
Sbjct: 207 ----------------------------DFGLVTAMDQDEEEQTVLTPMPAYATHXGQVG 238
Query: 241 GMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300
T Y SPE++ G S DI+ LG++
Sbjct: 239 ---------------------------------TKLYMSPEQIHGNNYSHKVDIFSLGLI 265
Query: 301 LFELFCPFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360
LFEL FST E+ R ++ +R+ P K+P+E +L P P+ RP+ ++++
Sbjct: 266 LFELLYSFSTQMERVRIITDVRNLKFPLLFTQKYPQEHMMVQDMLSPSPTERPEATDIIE 325
Query: 361 S 361
+
Sbjct: 326 N 326
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Query: 274 TNWYASPEELAGAP-VSCASDIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRVL--PPQL 330
T Y + E L G + D+Y LG++ FE+ PFSTG E+ + LR + PP
Sbjct: 193 TAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGMERVNILKKLRSVSIEFPPDF 252
Query: 331 -LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 364
K E L+ +P+ RP LL S +L
Sbjct: 253 DDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Query: 274 TNWYASPEELAGAP-VSCASDIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRVL--PPQL 330
T Y + E L G + D+Y LG++ FE+ PFSTG E+ + LR + PP
Sbjct: 193 TAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGMERVNILKKLRSVSIEFPPDF 252
Query: 331 -LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 364
K E L+ +P+ RP LL S +L
Sbjct: 253 DDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 42/95 (44%), Gaps = 4/95 (4%)
Query: 274 TNWYASPEELAGAP-VSCASDIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRVL--PPQL 330
T Y + E L G + D Y LG++ FE PFSTG E+ + LR + PP
Sbjct: 193 TAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXIYPFSTGXERVNILKKLRSVSIEFPPDF 252
Query: 331 -LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 364
K E L+ +P+ RP LL S +L
Sbjct: 253 DDNKXKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 122 ECLHIFRQIVEIVYAAHSQGIVVHNVRP-SCFVMSSFN 158
E +FRQI+E + HSQGI+ N++P + F+ S N
Sbjct: 117 EYWRLFRQILEALSYIHSQGIIHRNLKPXNIFIDESRN 154
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 94 DPFVHAI-EWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCF 152
D +++ + E G++ L WL K K+S+D +E ++ ++E V+ H GIV +++P+ F
Sbjct: 128 DQYIYMVMECGNIDLNSWLKK-KKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANF 186
Query: 153 VM 154
++
Sbjct: 187 LI 188
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 94 DPFVHAI-EWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCF 152
D +++ + E G++ L WL K K+S+D +E ++ ++E V+ H GIV +++P+ F
Sbjct: 128 DQYIYMVMECGNIDLNSWLKK-KKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANF 186
Query: 153 VM 154
++
Sbjct: 187 LI 188
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 94 DPFVHAI-EWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCF 152
D +++ + E G++ L WL K K+S+D +E ++ ++E V+ H GIV +++P+ F
Sbjct: 81 DQYIYMVMECGNIDLNSWLKK-KKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANF 139
Query: 153 VM 154
++
Sbjct: 140 LI 141
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 3/101 (2%)
Query: 277 YASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRVLPPQLLLKFPK 336
Y SPE+++ D+Y LG++L EL T E ++ + LR ++ + K
Sbjct: 187 YMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDGIISD---IFDKK 243
Query: 337 EASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEEREAA 377
E + LL +P RP E+L++ + + ER A
Sbjct: 244 EKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPEKNERHTA 284
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 94 DPFVHAI-EWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCF 152
D +++ + E G++ L WL K K+S+D +E ++ ++E V+ H GIV +++P+ F
Sbjct: 128 DQYIYMVMECGNIDLNSWLKK-KKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANF 186
Query: 153 VM 154
++
Sbjct: 187 LI 188
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Query: 277 YASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRVLPPQLLLKFPK 336
Y SPE+++ D+Y LG++L EL T E ++ + LR ++ + K
Sbjct: 201 YMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDGIISD---IFDKK 257
Query: 337 EASFCLWLLHPEPSGRPKMGELLQS 361
E + LL +P RP E+L++
Sbjct: 258 EKTLLQKLLSKKPEDRPNTSEILRT 282
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 94 DPFVHAI-EWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCF 152
D +++ + E G++ L WL K K+S+D +E ++ ++E V+ H GIV +++P+ F
Sbjct: 100 DQYIYMVMECGNIDLNSWLKK-KKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANF 158
Query: 153 VM 154
++
Sbjct: 159 LI 160
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 94 DPFVHAI-EWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCF 152
D +++ + E G++ L WL K K+S+D +E ++ ++E V+ H GIV +++P+ F
Sbjct: 84 DQYIYMVMECGNIDLNSWLKK-KKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANF 142
Query: 153 VM 154
++
Sbjct: 143 LI 144
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 94 DPFVHAI-EWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCF 152
D +++ + E G++ L WL K K+S+D +E ++ ++E V+ H GIV +++P+ F
Sbjct: 100 DQYIYMVMECGNIDLNSWLKK-KKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANF 158
Query: 153 VM 154
++
Sbjct: 159 LI 160
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 94 DPFVHAI-EWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCF 152
D +++ + E G++ L WL K K+S+D +E ++ ++E V+ H GIV +++P+ F
Sbjct: 80 DQYIYMVMECGNIDLNSWLKK-KKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANF 138
Query: 153 VM 154
++
Sbjct: 139 LI 140
>pdb|1KKJ|A Chain A, Crystal Structure Of Serine Hydroxymethyltransferase From
B.Stearothermophilus
pdb|1KKP|A Chain A, Crystal Structure Of Serine Hydroxymethyltransferase
Complexed With Serine
pdb|1KL1|A Chain A, Crystal Structure Of Serine Hydroxymethyltransferase
Complexed With Glycine
pdb|1KL2|A Chain A, Crystal Structure Of Serine Hydroxymethyltransferase
Complexed With Glycine And 5-formyl Tetrahydrofolate
pdb|1KL2|B Chain B, Crystal Structure Of Serine Hydroxymethyltransferase
Complexed With Glycine And 5-formyl Tetrahydrofolate
Length = 419
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 55/126 (43%), Gaps = 19/126 (15%)
Query: 51 GVRGDDSNDFELRKHSD---GVELTHGDHLRNQG--GLSGVCENEAA--IDPFVHAIEWG 103
G + + + F + +H D G+ L+HG HL + SGV N A +DP H I++
Sbjct: 94 GAQANMAVYFTVLEHGDTVLGMNLSHGGHLTHGSPVNFSGVQYNFVAYGVDPETHVIDYD 153
Query: 104 DVSLRQWLDKPKRSVDVYEC------LHIFRQIVEIVYA------AHSQGIVVHNVRPSC 151
DV + L +PK V FR+I + V A AH G+V + P+
Sbjct: 154 DVREKARLHRPKLIVAAASAYPRIIDFAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNP 213
Query: 152 FVMSSF 157
+ F
Sbjct: 214 VPYAHF 219
>pdb|1YJS|A Chain A, K226q Mutant Of Serine Hydroxymethyltransferase From B.
Stearothermophilus, Complex With Glycine
Length = 419
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 55/126 (43%), Gaps = 19/126 (15%)
Query: 51 GVRGDDSNDFELRKHSD---GVELTHGDHLRNQG--GLSGVCENEAA--IDPFVHAIEWG 103
G + + + F + +H D G+ L+HG HL + SGV N A +DP H I++
Sbjct: 94 GAQANMAVYFTVLEHGDTVLGMNLSHGGHLTHGSPVNFSGVQYNFVAYGVDPETHVIDYD 153
Query: 104 DVSLRQWLDKPKRSVDVYEC------LHIFRQIVEIVYA------AHSQGIVVHNVRPSC 151
DV + L +PK V FR+I + V A AH G+V + P+
Sbjct: 154 DVREKARLHRPKLIVAAASAYPRIIDFAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNP 213
Query: 152 FVMSSF 157
+ F
Sbjct: 214 VPYAHF 219
>pdb|1YJY|A Chain A, K226m Mutant Of Serine Hydroxymethyltransferase From B.
Stearothermophilus, Complex With Serine
pdb|1YJZ|A Chain A, K226m Mutant Of Serine Hydroxymethyltransferase From B.
Stearothermophilus
Length = 419
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 55/126 (43%), Gaps = 19/126 (15%)
Query: 51 GVRGDDSNDFELRKHSD---GVELTHGDHLRNQG--GLSGVCENEAA--IDPFVHAIEWG 103
G + + + F + +H D G+ L+HG HL + SGV N A +DP H I++
Sbjct: 94 GAQANMAVYFTVLEHGDTVLGMNLSHGGHLTHGSPVNFSGVQYNFVAYGVDPETHVIDYD 153
Query: 104 DVSLRQWLDKPKRSVDVYEC------LHIFRQIVEIVYA------AHSQGIVVHNVRPSC 151
DV + L +PK V FR+I + V A AH G+V + P+
Sbjct: 154 DVREKARLHRPKLIVAAASAYPRIIDFAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNP 213
Query: 152 FVMSSF 157
+ F
Sbjct: 214 VPYAHF 219
>pdb|2VMN|A Chain A, Crystal Structure Of N341absshmt Internal Aldimine
pdb|2VMO|A Chain A, Crystal Structure Of N341absshmt Gly External Aldimine
pdb|2VMP|A Chain A, Crystal Structure Of N341absshmt L-Ser External Aldimine
pdb|2VMQ|A Chain A, Structure Of N341absshmt Crystallized In The Presence Of
L- Allo-Thr
Length = 405
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 55/126 (43%), Gaps = 19/126 (15%)
Query: 51 GVRGDDSNDFELRKHSD---GVELTHGDHLRNQG--GLSGVCENEAA--IDPFVHAIEWG 103
G + + + F + +H D G+ L+HG HL + SGV N A +DP H I++
Sbjct: 94 GAQANMAVYFTVLEHGDTVLGMNLSHGGHLTHGSPVNFSGVQYNFVAYGVDPETHVIDYD 153
Query: 104 DVSLRQWLDKPKRSVDVYEC------LHIFRQIVEIVYA------AHSQGIVVHNVRPSC 151
DV + L +PK V FR+I + V A AH G+V + P+
Sbjct: 154 DVREKARLHRPKLIVAAASAYPRIIDFAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNP 213
Query: 152 FVMSSF 157
+ F
Sbjct: 214 VPYAHF 219
>pdb|2W7I|A Chain A, Crystal Structure Of Y61absshmt Internal Aldimine
pdb|2W7J|A Chain A, Crystal Structure Of Y61absshmt Glycine External Aldimine
pdb|2W7K|A Chain A, Crystal Structure Of Y61absshmt L-Serine External Aldimine
pdb|2W7L|A Chain A, Crystal Structure Of Y61absshmt L-Allo-Threonine External
Aldimine
pdb|2W7M|A Chain A, Crystal Structure Of Y61absshmt Obtained In The Presence
Of Glycine And 5-Formyl Tetrahydrofolate
Length = 405
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 55/126 (43%), Gaps = 19/126 (15%)
Query: 51 GVRGDDSNDFELRKHSD---GVELTHGDHLRNQG--GLSGVCENEAA--IDPFVHAIEWG 103
G + + + F + +H D G+ L+HG HL + SGV N A +DP H I++
Sbjct: 94 GAQANMAVYFTVLEHGDTVLGMNLSHGGHLTHGSPVNFSGVQYNFVAYGVDPETHVIDYD 153
Query: 104 DVSLRQWLDKPKRSVDVYEC------LHIFRQIVEIVYA------AHSQGIVVHNVRPSC 151
DV + L +PK V FR+I + V A AH G+V + P+
Sbjct: 154 DVREKARLHRPKLIVAAASAYPRIIDFAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNP 213
Query: 152 FVMSSF 157
+ F
Sbjct: 214 VPYAHF 219
>pdb|2VMR|A Chain A, Crystal Structure Of Y60absshmt Internal Aldimine
pdb|2VMS|A Chain A, Crystal Structure Of Y60absshmt Crystallized In The
Presence Of Glycine
pdb|2VMT|A Chain A, Crystal Structure Of Y60absshmt L-Ser External Aldimine
pdb|2VMU|A Chain A, Crystal Structure Of Y60absshmt Crystallized In The
Presence Of L-Allo-Thr
Length = 405
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 55/126 (43%), Gaps = 19/126 (15%)
Query: 51 GVRGDDSNDFELRKHSD---GVELTHGDHLRNQG--GLSGVCENEAA--IDPFVHAIEWG 103
G + + + F + +H D G+ L+HG HL + SGV N A +DP H I++
Sbjct: 94 GAQANMAVYFTVLEHGDTVLGMNLSHGGHLTHGSPVNFSGVQYNFVAYGVDPETHVIDYD 153
Query: 104 DVSLRQWLDKPKRSVDVYEC------LHIFRQIVEIVYA------AHSQGIVVHNVRPSC 151
DV + L +PK V FR+I + V A AH G+V + P+
Sbjct: 154 DVREKARLHRPKLIVAAASAYPRIIDFAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNP 213
Query: 152 FVMSSF 157
+ F
Sbjct: 214 VPYAHF 219
>pdb|2VI8|A Chain A, Crystal Structure Of S172absshmt Internal Aldimine
pdb|2VIB|A Chain A, Crystal Structure Of S172absshmt Obtained In The Presence
Of L-Allo-Thr
pdb|2VIA|A Chain A, Crystal Structure Of S172absshmt L-Serine External
Aldimine
pdb|2VI9|A Chain A, Crystal Structure Of S172absshmt Glycine External Aldimine
Length = 405
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 55/126 (43%), Gaps = 19/126 (15%)
Query: 51 GVRGDDSNDFELRKHSD---GVELTHGDHLRNQG--GLSGVCENEAA--IDPFVHAIEWG 103
G + + + F + +H D G+ L+HG HL + SGV N A +DP H I++
Sbjct: 94 GAQANMAVYFTVLEHGDTVLGMNLSHGGHLTHGSPVNFSGVQYNFVAYGVDPETHVIDYD 153
Query: 104 DVSLRQWLDKPKRSVDVYEC------LHIFRQIVEIVYA------AHSQGIVVHNVRPSC 151
DV + L +PK V FR+I + V A AH G+V + P+
Sbjct: 154 DVREKARLHRPKLIVAAAAAYPRIIDFAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNP 213
Query: 152 FVMSSF 157
+ F
Sbjct: 214 VPYAHF 219
>pdb|2W7D|A Chain A, Crystal Structure Of Y51fbsshmt Internal Aldimine
pdb|2W7E|A Chain A, Crystal Structure Of Y51fbsshmt Obtained In The Presence
Of Glycine
pdb|2W7F|A Chain A, Crystal Structure Of Y51fbsshmt L-Ser External Aldimine
pdb|2W7G|A Chain A, Crystal Structure Of Y51fbsshmt L-Allo-Threonine Extrnal
Aldimine
pdb|2W7H|A Chain A, Crystal Structure Of Y51fbsshmt Obtained In The Presence
Of Gly And 5-Formyl Tetrahydrofolate
Length = 405
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 55/126 (43%), Gaps = 19/126 (15%)
Query: 51 GVRGDDSNDFELRKHSD---GVELTHGDHLRNQG--GLSGVCENEAA--IDPFVHAIEWG 103
G + + + F + +H D G+ L+HG HL + SGV N A +DP H I++
Sbjct: 94 GAQANMAVYFTVLEHGDTVLGMNLSHGGHLTHGSPVNFSGVQYNFVAYGVDPETHVIDYD 153
Query: 104 DVSLRQWLDKPKRSVDVYEC------LHIFRQIVEIVYA------AHSQGIVVHNVRPSC 151
DV + L +PK V FR+I + V A AH G+V + P+
Sbjct: 154 DVREKARLHRPKLIVAAASAYPRIIDFAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNP 213
Query: 152 FVMSSF 157
+ F
Sbjct: 214 VPYAHF 219
>pdb|2VMV|A Chain A, Crystal Structure Of F351gbsshmt Internal Aldimine
pdb|2VMX|A Chain A, Crystal Structure Of F351gbsshmt In Complex With
L-Allo-Thr
pdb|2VMY|A Chain A, Crystal Structure Of F351gbsshmt In Complex With Gly And
Fthf
pdb|2VMY|B Chain B, Crystal Structure Of F351gbsshmt In Complex With Gly And
Fthf
pdb|2VMW|A Chain A, Crystal Structure Of F351gbsshmt In Complex With L-Ser
pdb|2VMZ|A Chain A, Crystal Structure Of F351gbsshmt In Complex With Gly
Length = 405
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 55/126 (43%), Gaps = 19/126 (15%)
Query: 51 GVRGDDSNDFELRKHSD---GVELTHGDHLRNQG--GLSGVCENEAA--IDPFVHAIEWG 103
G + + + F + +H D G+ L+HG HL + SGV N A +DP H I++
Sbjct: 94 GAQANMAVYFTVLEHGDTVLGMNLSHGGHLTHGSPVNFSGVQYNFVAYGVDPETHVIDYD 153
Query: 104 DVSLRQWLDKPKRSVDVYEC------LHIFRQIVEIVYA------AHSQGIVVHNVRPSC 151
DV + L +PK V FR+I + V A AH G+V + P+
Sbjct: 154 DVREKARLHRPKLIVAAASAYPRIIDFAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNP 213
Query: 152 FVMSSF 157
+ F
Sbjct: 214 VPYAHF 219
>pdb|2VGS|A Chain A, Crystal Structure Of E53qbsshmt Internal Aldimine
pdb|2VGT|A Chain A, Crystal Structure Of E53qbsshmt With Glycine
pdb|2VGV|A Chain A, Crystal Structure Of E53qbsshmt Obtained In The Presence
Of L-Allo-Threonine
pdb|2VGW|A Chain A, Crystal Structure Of E53qbsshmt Obtained In The Presence
Of Glycine And 5-Fomyl Tetrahydrofolate
pdb|2VGU|A Chain A, Crystal Structure Of E53qbsshmt With L-Serine
Length = 407
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 55/126 (43%), Gaps = 19/126 (15%)
Query: 51 GVRGDDSNDFELRKHSD---GVELTHGDHLRNQG--GLSGVCENEAA--IDPFVHAIEWG 103
G + + + F + +H D G+ L+HG HL + SGV N A +DP H I++
Sbjct: 94 GAQANMAVYFTVLEHGDTVLGMNLSHGGHLTHGSPVNFSGVQYNFVAYGVDPETHVIDYD 153
Query: 104 DVSLRQWLDKPKRSVDVYEC------LHIFRQIVEIVYA------AHSQGIVVHNVRPSC 151
DV + L +PK V FR+I + V A AH G+V + P+
Sbjct: 154 DVREKARLHRPKLIVAAASAYPRIIDFAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNP 213
Query: 152 FVMSSF 157
+ F
Sbjct: 214 VPYAHF 219
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 10/105 (9%)
Query: 266 MKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRV 325
+K+ + T ++ +PE + + +DI+ LG+ EL + GE M +R
Sbjct: 175 IKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIEL----AKGEPPNSDMHPMRVLF 230
Query: 326 L-----PPQLLLKFPKE-ASFCLWLLHPEPSGRPKMGELLQSEFL 364
L PP L+ F K F L+ +PS RP ELL+ +F+
Sbjct: 231 LIPKNNPPTLVGDFTKSFKEFIDACLNKDPSFRPTAKELLKHKFI 275
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 233 GTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCAS 292
T +LVE KI D + + + + K+ F +K+ WYA PE L + S AS
Sbjct: 141 ATRNILVENENRVKIGDFGL-TKVLPQDKEFFKVKEPGESPIFWYA-PESLTESKFSVAS 198
Query: 293 DIYRLGVLLFELFC 306
D++ GV+L+ELF
Sbjct: 199 DVWSFGVVLYELFT 212
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 6/99 (6%)
Query: 271 LMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--PFSTGEEKTRTMSSLRHRVLPP 328
L+ T ++ +PE ++ P DI+ LG+++ E+ P E + M +R LPP
Sbjct: 176 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDN-LPP 234
Query: 329 QL--LLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFL 364
+L L K P F LL +P+ R ELL+ FL
Sbjct: 235 RLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFL 273
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 6/99 (6%)
Query: 271 LMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--PFSTGEEKTRTMSSLRHRVLPP 328
L+ T ++ +PE ++ P DI+ LG+++ E+ P E + M +R LPP
Sbjct: 180 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDN-LPP 238
Query: 329 QL--LLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFL 364
+L L K P F LL +P+ R ELL+ FL
Sbjct: 239 RLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFL 277
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 6/99 (6%)
Query: 271 LMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--PFSTGEEKTRTMSSLRHRVLPP 328
L+ T ++ +PE ++ P DI+ LG+++ E+ P E + M +R LPP
Sbjct: 185 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDN-LPP 243
Query: 329 QL--LLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFL 364
+L L K P F LL +P+ R ELL+ FL
Sbjct: 244 RLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFL 282
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 6/99 (6%)
Query: 271 LMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--PFSTGEEKTRTMSSLRHRVLPP 328
L+ T ++ +PE ++ P DI+ LG+++ E+ P E + M +R LPP
Sbjct: 187 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDN-LPP 245
Query: 329 QL--LLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFL 364
+L L K P F LL +P+ R ELL+ FL
Sbjct: 246 RLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFL 284
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 21/35 (60%)
Query: 272 METNWYASPEELAGAPVSCASDIYRLGVLLFELFC 306
++T Y SPE L GAP C +DI+ L+FEL
Sbjct: 196 IQTREYRSPEVLLGAPWGCGADIWSTACLIFELIT 230
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 37.7 bits (86), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 21/35 (60%)
Query: 272 METNWYASPEELAGAPVSCASDIYRLGVLLFELFC 306
++T Y SPE L GAP C +DI+ L+FEL
Sbjct: 196 IQTREYRSPEVLLGAPWGCGADIWSTACLIFELIT 230
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Query: 271 LMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLP 327
++ T Y SPE+ G V SD+Y LG +L+E+ PF+ + +R +P
Sbjct: 179 VIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQHVREDPIP 238
Query: 328 P 328
P
Sbjct: 239 P 239
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 6/99 (6%)
Query: 271 LMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--PFSTGEEKTRTMSSLRHRVLPP 328
L+ T ++ +PE ++ P DI+ LG+++ E+ P E + M +R LPP
Sbjct: 230 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDN-LPP 288
Query: 329 QL--LLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFL 364
+L L K P F LL +P+ R ELL+ FL
Sbjct: 289 RLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFL 327
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 5/98 (5%)
Query: 271 LMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLP 327
L T Y +PE L S DI+ LG +L+ L PF T K + ++
Sbjct: 186 LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSV 245
Query: 328 PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLN 365
P+ + P ++ +LH +P+ RP + ELL EF
Sbjct: 246 PRHI--NPVASALIRRMLHADPTLRPSVAELLTDEFFT 281
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 233 GTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCAS 292
T +LVE KI D + + + + K+ + +K+ WYA PE L + S AS
Sbjct: 142 ATRNILVENENRVKIGDFGL-TKVLPQDKEYYKVKEPGESPIFWYA-PESLTESKFSVAS 199
Query: 293 DIYRLGVLLFELFC 306
D++ GV+L+ELF
Sbjct: 200 DVWSFGVVLYELFT 213
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 5/79 (6%)
Query: 277 YASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLK 333
Y +PE +A P + D + GVLL+E+ PF +E S + H V P+ L K
Sbjct: 186 YIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKSLSK 245
Query: 334 FPKEASFCLWLLHPEPSGR 352
+ S C L+ P+ R
Sbjct: 246 --EAVSICKGLMTKHPAKR 262
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 37.0 bits (84), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 6/99 (6%)
Query: 271 LMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--PFSTGEEKTRTMSSLRHRVLPP 328
L+ T ++ +PE ++ P DI+ LG+++ E+ P E + M +R LPP
Sbjct: 307 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDN-LPP 365
Query: 329 QL--LLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFL 364
+L L K P F LL +P+ R ELL+ FL
Sbjct: 366 RLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFL 404
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 37.0 bits (84), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Query: 271 LMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLP 327
++ T Y SPE+ G V SD+Y LG +L+E+ PF+ + +R +P
Sbjct: 196 VIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIP 255
Query: 328 P 328
P
Sbjct: 256 P 256
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 37.0 bits (84), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 276 WYASPEELAGAPVSCASDIYRLGVLLFELFC 306
WYA PE L + S ASD++ GV+L+ELF
Sbjct: 186 WYA-PESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 37.0 bits (84), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 276 WYASPEELAGAPVSCASDIYRLGVLLFELFC 306
WYA PE L + S ASD++ GV+L+ELF
Sbjct: 201 WYA-PESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 36.6 bits (83), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Query: 271 LMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLP 327
++ T Y SPE+ G V SD+Y LG +L+E+ PF+ + +R +P
Sbjct: 179 VIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIP 238
Query: 328 P 328
P
Sbjct: 239 P 239
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 36.6 bits (83), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 276 WYASPEELAGAPVSCASDIYRLGVLLFELFC 306
WYA PE L + S ASD++ GV+L+ELF
Sbjct: 182 WYA-PESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 36.6 bits (83), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 5/98 (5%)
Query: 271 LMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLP 327
L T Y +PE L S DI+ LG +L+ L PF T K + ++
Sbjct: 202 LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSV 261
Query: 328 PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLN 365
P+ + P ++ +LH +P+ RP + ELL EF
Sbjct: 262 PRHI--NPVASALIRRMLHADPTLRPSVAELLTDEFFT 297
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 36.6 bits (83), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 276 WYASPEELAGAPVSCASDIYRLGVLLFELFC 306
WYA PE L + S ASD++ GV+L+ELF
Sbjct: 183 WYA-PESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 36.6 bits (83), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Query: 271 LMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLP 327
++ T Y SPE+ G V SD+Y LG +L+E+ PF+ + +R +P
Sbjct: 179 VIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIP 238
Query: 328 P 328
P
Sbjct: 239 P 239
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 276 WYASPEELAGAPVSCASDIYRLGVLLFELFC 306
WYA PE L + S ASD++ GV+L+ELF
Sbjct: 190 WYA-PESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 276 WYASPEELAGAPVSCASDIYRLGVLLFELFC 306
WYA PE L + S ASD++ GV+L+ELF
Sbjct: 188 WYA-PESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 276 WYASPEELAGAPVSCASDIYRLGVLLFELFC 306
WYA PE L + S ASD++ GV+L+ELF
Sbjct: 201 WYA-PESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 276 WYASPEELAGAPVSCASDIYRLGVLLFELFC 306
WYA PE L + S ASD++ GV+L+ELF
Sbjct: 181 WYA-PESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 276 WYASPEELAGAPVSCASDIYRLGVLLFELFC 306
WYA PE L + S ASD++ GV+L+ELF
Sbjct: 183 WYA-PESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 5/98 (5%)
Query: 271 LMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLP 327
L T Y +PE L S DI+ LG +L+ L PF T K + ++
Sbjct: 202 LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSV 261
Query: 328 PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLN 365
P+ + P ++ +LH +P+ RP + ELL EF
Sbjct: 262 PRHI--NPVASALIRRMLHADPTLRPSVAELLTDEFFT 297
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 276 WYASPEELAGAPVSCASDIYRLGVLLFELFC 306
WYA PE L + S ASD++ GV+L+ELF
Sbjct: 189 WYA-PESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 276 WYASPEELAGAPVSCASDIYRLGVLLFELFC 306
WYA PE L + S ASD++ GV+L+ELF
Sbjct: 214 WYA-PESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 36.6 bits (83), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 276 WYASPEELAGAPVSCASDIYRLGVLLFELFC 306
WYA PE L + S ASD++ GV+L+ELF
Sbjct: 186 WYA-PESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 36.6 bits (83), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 5/98 (5%)
Query: 271 LMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLP 327
L T Y +PE L S DI+ LG +L+ L PF T K + ++
Sbjct: 202 LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSV 261
Query: 328 PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLN 365
P+ + P ++ +LH +P+ RP + ELL EF
Sbjct: 262 PRHI--NPVASALIRRMLHADPTLRPSVAELLTDEFFT 297
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 36.6 bits (83), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Query: 271 LMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLP 327
++ T Y SPE+ G V SD+Y LG +L+E+ PF+ + +R +P
Sbjct: 179 VIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIP 238
Query: 328 P 328
P
Sbjct: 239 P 239
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 36.6 bits (83), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 276 WYASPEELAGAPVSCASDIYRLGVLLFELFC 306
WYA PE L + S ASD++ GV+L+ELF
Sbjct: 187 WYA-PESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 36.6 bits (83), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 276 WYASPEELAGAPVSCASDIYRLGVLLFELFC 306
WYA PE L + S ASD++ GV+L+ELF
Sbjct: 186 WYA-PESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 36.6 bits (83), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 5/99 (5%)
Query: 270 LLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVL 326
+L T Y +PE L+ S D++ +G +++ L PF T K + ++
Sbjct: 174 VLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYS 233
Query: 327 PPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLN 365
P+ + P AS +L +P+ RP + ELL EF
Sbjct: 234 IPKHI--NPVAASLIQKMLQTDPTARPTINELLNDEFFT 270
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 36.6 bits (83), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Query: 271 LMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLP 327
++ T Y SPE+ G V SD+Y LG +L+E+ PF+ + +R +P
Sbjct: 179 VIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIP 238
Query: 328 P 328
P
Sbjct: 239 P 239
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 36.2 bits (82), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 5/102 (4%)
Query: 267 KQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRH 323
++ +L T Y +PE L+ S D++ +G +++ L PF T K + ++
Sbjct: 195 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN 254
Query: 324 RVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLN 365
P+ + P AS +L +P+ RP + ELL EF
Sbjct: 255 EYSIPKHI--NPVAASLIQKMLQTDPTARPTINELLNDEFFT 294
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 36.2 bits (82), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Query: 277 YASPEELAGAPVSCASDIYRLGVLLFELF---CPFSTGEEKTRTMSSLRHRVLPPQLLLK 333
Y +PE +A P + D + GVLL+E+ PF +E S + H V P+ + K
Sbjct: 187 YIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSK 246
Query: 334 FPKEASFCLWLLHPEPSGR 352
+ + C L+ P R
Sbjct: 247 --EAVAICKGLMTKHPGKR 263
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 36.2 bits (82), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 5/102 (4%)
Query: 267 KQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRH 323
++ +L T Y +PE L+ S D++ +G +++ L PF T K + ++
Sbjct: 197 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN 256
Query: 324 RVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLN 365
P+ + P AS +L +P+ RP + ELL EF
Sbjct: 257 EYSIPKHI--NPVAASLIQKMLQTDPTARPTINELLNDEFFT 296
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 35.8 bits (81), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
Query: 272 METNWYASPEELAGAPVSCASDIYRLGVLLFELFC--PFSTGEEKTRTMSSLRHRV-LPP 328
+++ +Y SPE L G P A D++ LG +L E+ P +G + M+ + + +PP
Sbjct: 219 IQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPP 278
Query: 329 -QLLLKFPKEASF 340
+L + PK F
Sbjct: 279 AHILDQAPKARKF 291
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 35.8 bits (81), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
Query: 272 METNWYASPEELAGAPVSCASDIYRLGVLLFELFC--PFSTGEEKTRTMSSLRHRV-LPP 328
+++ +Y SPE L G P A D++ LG +L E+ P +G + M+ + + +PP
Sbjct: 200 IQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPP 259
Query: 329 -QLLLKFPKEASF 340
+L + PK F
Sbjct: 260 AHILDQAPKARKF 272
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 35.8 bits (81), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 5/98 (5%)
Query: 271 LMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLP 327
L T Y +PE L+ S D++ +G +++ L PF T K + ++
Sbjct: 177 LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSI 236
Query: 328 PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLN 365
P+ + P AS +L +P+ RP + ELL EF
Sbjct: 237 PKHI--NPVAASLIQKMLQTDPTARPTINELLNDEFFT 272
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 35.8 bits (81), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
Query: 272 METNWYASPEELAGAPVSCASDIYRLGVLLFELFC--PFSTGEEKTRTMSSLRHRV-LPP 328
+++ +Y SPE L G P A D++ LG +L E+ P +G + M+ + + +PP
Sbjct: 219 IQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPP 278
Query: 329 -QLLLKFPKEASF 340
+L + PK F
Sbjct: 279 AHILDQAPKARKF 291
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 35.8 bits (81), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 5/98 (5%)
Query: 271 LMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLP 327
L T Y +PE L+ S D++ +G +++ L PF T K + ++
Sbjct: 177 LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSI 236
Query: 328 PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLN 365
P+ + P AS +L +P+ RP + ELL EF
Sbjct: 237 PKHI--NPVAASLIQKMLQTDPTARPTINELLNDEFFT 272
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 35.8 bits (81), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 5/98 (5%)
Query: 271 LMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLP 327
L T Y +PE L+ S D++ +G +++ L PF T K + ++
Sbjct: 181 LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSI 240
Query: 328 PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLN 365
P+ + P AS +L +P+ RP + ELL EF
Sbjct: 241 PKHI--NPVAASLIQKMLQTDPTARPTINELLNDEFFT 276
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 35.4 bits (80), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Query: 277 YASPEELAGAPVSCASDIYRLGVLLFELF---CPFSTGEEKTRTMSSLRHRVLPPQLLLK 333
Y +PE +A P + D + GVLL+E+ PF +E S + H V P+ + K
Sbjct: 508 YIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSK 567
Query: 334 FPKEASFCLWLLHPEPSGR 352
+ + C L+ P R
Sbjct: 568 --EAVAICKGLMTKHPGKR 584
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 38/94 (40%), Gaps = 4/94 (4%)
Query: 274 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQL 330
T +Y SPE P + SDI+ LG +L+EL F G K + + P L
Sbjct: 188 TPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVSL 247
Query: 331 LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 364
+ S L P RP + +L+ F+
Sbjct: 248 HYSYDLR-SLVSQLFKRNPRDRPSVNSILEKGFI 280
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 39/92 (42%), Gaps = 3/92 (3%)
Query: 277 YASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRVLPPQLLLKFPK 336
Y +PE L G+ A+D++ LG+ + E+ C LR LPP+
Sbjct: 222 YMAPELLQGS-YGTAADVFSLGLTILEVACNMEL-PHGGEGWQQLRQGYLPPEFTAGLSS 279
Query: 337 EA-SFCLWLLHPEPSGRPKMGELLQSEFLNEP 367
E S + +L P+P R LL L +P
Sbjct: 280 ELRSVLVMMLEPDPKLRATAEALLALPVLRQP 311
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 62/151 (41%), Gaps = 22/151 (14%)
Query: 237 VLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYR 296
+LV E K+ D V+ + ++ F + T Y SPE L G S SDI+
Sbjct: 155 ILVNSRGEIKLCDFGVSGQLIDSMANSF-------VGTRSYMSPERLQGTHYSVQSDIWS 207
Query: 297 LGVLLFELFC---PFSTGEEKTRTMSSLRHRV--LPPQL-----LLKFPKEASFCLWLLH 346
+G+ L E+ P +G L + V PP+L L+F + CL
Sbjct: 208 MGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLI--- 264
Query: 347 PEPSGRPKMGELLQSEFLNEPRDSMEEREAA 377
P+ R + +L+ F+ R EE + A
Sbjct: 265 KNPAERADLKQLMVHAFIK--RSDAEEVDFA 293
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 48/104 (46%), Gaps = 6/104 (5%)
Query: 267 KQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--PFSTGEEKTRTMSSLRHR 324
K+ L+ T ++ +PE ++ P DI+ LG+++ E+ P E + M +R
Sbjct: 197 KRKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDS 256
Query: 325 VLPPQL--LLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLN 365
LPP++ L K F +L EPS R ELL FL
Sbjct: 257 -LPPRVKDLHKVSSVLRGFLDLMLVREPSQRATAQELLGHPFLK 299
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 55/118 (46%), Gaps = 22/118 (18%)
Query: 210 LQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKI-LDNRVNVEQVEEKKQPFPMKQ 268
L+++T T L E C + S G H VL ++ + LD + NV K F + +
Sbjct: 114 LRVMTQLTLALKE--CHRRSD--GGHTVLHRDLKPANVFLDGKQNV-----KLGDFGLAR 164
Query: 269 IL---------LMETNWYASPEELAGAPVSCASDIYRLGVLLFE---LFCPFSTGEEK 314
IL + T +Y SPE++ + SDI+ LG LL+E L PF+ +K
Sbjct: 165 ILNHDEDFAKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK 222
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 55/118 (46%), Gaps = 22/118 (18%)
Query: 210 LQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKI-LDNRVNVEQVEEKKQPFPMKQ 268
L+++T T L E C + S G H VL ++ + LD + NV K F + +
Sbjct: 114 LRVMTQLTLALKE--CHRRSD--GGHTVLHRDLKPANVFLDGKQNV-----KLGDFGLAR 164
Query: 269 IL---------LMETNWYASPEELAGAPVSCASDIYRLGVLLFE---LFCPFSTGEEK 314
IL + T +Y SPE++ + SDI+ LG LL+E L PF+ +K
Sbjct: 165 ILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK 222
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 55/118 (46%), Gaps = 22/118 (18%)
Query: 210 LQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKI-LDNRVNVEQVEEKKQPFPMKQ 268
L+++T T L E C + S G H VL ++ + LD + NV K F + +
Sbjct: 114 LRVMTQLTLALKE--CHRRSD--GGHTVLHRDLKPANVFLDGKQNV-----KLGDFGLAR 164
Query: 269 IL---------LMETNWYASPEELAGAPVSCASDIYRLGVLLFE---LFCPFSTGEEK 314
IL + T +Y SPE++ + SDI+ LG LL+E L PF+ +K
Sbjct: 165 ILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK 222
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 37/85 (43%), Gaps = 7/85 (8%)
Query: 274 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQL 330
T + +PE L G + D + LGV L+E+ PF EK L+ RVL +
Sbjct: 352 TPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVEN-KELKQRVLEQAV 410
Query: 331 LL--KF-PKEASFCLWLLHPEPSGR 352
KF P FC LL +P R
Sbjct: 411 TYPDKFSPASKDFCEALLQKDPEKR 435
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 37/85 (43%), Gaps = 7/85 (8%)
Query: 274 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQL 330
T + +PE L G + D + LGV L+E+ PF EK L+ RVL +
Sbjct: 352 TPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVEN-KELKQRVLEQAV 410
Query: 331 LL--KF-PKEASFCLWLLHPEPSGR 352
KF P FC LL +P R
Sbjct: 411 TYPDKFSPASKDFCEALLQKDPEKR 435
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 33.9 bits (76), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 37/85 (43%), Gaps = 7/85 (8%)
Query: 274 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQL 330
T + +PE L G + D + LGV L+E+ PF EK L+ RVL +
Sbjct: 352 TPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVEN-KELKQRVLEQAV 410
Query: 331 LL--KF-PKEASFCLWLLHPEPSGR 352
KF P FC LL +P R
Sbjct: 411 TYPDKFSPASKDFCEALLQKDPEKR 435
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 37/85 (43%), Gaps = 7/85 (8%)
Query: 274 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQL 330
T + +PE L G + D + LGV L+E+ PF EK L+ RVL +
Sbjct: 352 TPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVEN-KELKQRVLEQAV 410
Query: 331 LL--KF-PKEASFCLWLLHPEPSGR 352
KF P FC LL +P R
Sbjct: 411 TYPDKFSPASKDFCEALLQKDPEKR 435
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 33.5 bits (75), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 76/182 (41%), Gaps = 22/182 (12%)
Query: 189 DLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKIL 248
DL P PLD Q T LR +++ SE + A VL+ E K+
Sbjct: 94 DLLEPGPLDETQIATILR----EILKGLDYLHSEKKIHRDIKAAN---VLLSEHGEVKLA 146
Query: 249 DNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFCPF 308
D V + + + +K+ + T ++ +PE + + +DI+ LG+ EL
Sbjct: 147 DFGVAGQLTDTQ-----IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIEL---- 197
Query: 309 STGEEKTRTMSSLRHRVL-----PPQLLLKFPKE-ASFCLWLLHPEPSGRPKMGELLQSE 362
+ GE + ++ L PP L + K F L+ EPS RP ELL+ +
Sbjct: 198 ARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHK 257
Query: 363 FL 364
F+
Sbjct: 258 FI 259
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 33.5 bits (75), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 24/44 (54%)
Query: 274 TNWYASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGEEKTRT 317
T Y +PE LA P S A D + +GV+ + L C + E+T +
Sbjct: 170 TPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETES 213
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 33.5 bits (75), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 76/182 (41%), Gaps = 22/182 (12%)
Query: 189 DLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKIL 248
DL P PLD Q T LR +++ SE + A VL+ E K+
Sbjct: 109 DLLEPGPLDETQIATILR----EILKGLDYLHSEKKIHRDIKAAN---VLLSEHGEVKLA 161
Query: 249 DNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFCPF 308
D V + + + +K+ + T ++ +PE + + +DI+ LG+ EL
Sbjct: 162 DFGVAGQLTDTQ-----IKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIEL---- 212
Query: 309 STGEEKTRTMSSLRHRVL-----PPQLLLKFPKE-ASFCLWLLHPEPSGRPKMGELLQSE 362
+ GE + ++ L PP L + K F L+ EPS RP ELL+ +
Sbjct: 213 ARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHK 272
Query: 363 FL 364
F+
Sbjct: 273 FI 274
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 33.1 bits (74), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 76/182 (41%), Gaps = 22/182 (12%)
Query: 189 DLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKIL 248
DL P PLD Q T LR +++ SE + A VL+ E K+
Sbjct: 94 DLLEPGPLDETQIATILR----EILKGLDYLHSEKKIHRDIKAAN---VLLSEHGEVKLA 146
Query: 249 DNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFCPF 308
D V + + + +K+ + T ++ +PE + + +DI+ LG+ EL
Sbjct: 147 DFGVAGQLTDTQ-----IKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIEL---- 197
Query: 309 STGEEKTRTMSSLRHRVL-----PPQLLLKFPKE-ASFCLWLLHPEPSGRPKMGELLQSE 362
+ GE + ++ L PP L + K F L+ EPS RP ELL+ +
Sbjct: 198 ARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHK 257
Query: 363 FL 364
F+
Sbjct: 258 FI 259
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 33.1 bits (74), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Query: 271 LMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFS 309
++ T Y SPE+ G +DIY +G++L+E+ PF+
Sbjct: 172 VLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFN 213
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 33.1 bits (74), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 76/182 (41%), Gaps = 22/182 (12%)
Query: 189 DLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKIL 248
DL P PLD Q T LR +++ SE + A VL+ E K+
Sbjct: 114 DLLEPGPLDETQIATILR----EILKGLDYLHSEKKIHRDIKAAN---VLLSEHGEVKLA 166
Query: 249 DNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFCPF 308
D V + + + +K+ + T ++ +PE + + +DI+ LG+ EL
Sbjct: 167 DFGVAGQLTDTQ-----IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIEL---- 217
Query: 309 STGEEKTRTMSSLRHRVL-----PPQLLLKFPKE-ASFCLWLLHPEPSGRPKMGELLQSE 362
+ GE + ++ L PP L + K F L+ EPS RP ELL+ +
Sbjct: 218 ARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHK 277
Query: 363 FL 364
F+
Sbjct: 278 FI 279
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 33.1 bits (74), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 42/104 (40%), Gaps = 24/104 (23%)
Query: 277 YASPEELAGAPVSCASDIYRLGVLLFELFCPFST-GEEKTRTMSSLR------------H 323
Y PE ++ SD+Y GV+LFE+ C S + R M +L
Sbjct: 207 YIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLE 266
Query: 324 RVLPPQL--------LLKFPKEASFCLWLLHPEPSGRPKMGELL 359
+++ P L L KF A CL L RP MG++L
Sbjct: 267 QIVDPNLADKIRPESLRKFGDTAVKCLAL---SSEDRPSMGDVL 307
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 32.7 bits (73), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 40/91 (43%), Gaps = 9/91 (9%)
Query: 277 YASPEELAGAPVSCASDIYRLGVLLFELFC----PFS--TGEEKTRTMSSLRHRVLPPQL 330
+++PE S SD++ G+L++E+F P+ T E +S HR+ P L
Sbjct: 171 WSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQ-GHRLYRPHL 229
Query: 331 LLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361
+ + W H P RP +LL S
Sbjct: 230 ASDTIYQIMYSCW--HELPEKRPTFQQLLSS 258
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 32.7 bits (73), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 42/104 (40%), Gaps = 24/104 (23%)
Query: 277 YASPEELAGAPVSCASDIYRLGVLLFELFCPFST-GEEKTRTMSSLR------------H 323
Y PE ++ SD+Y GV+LFE+ C S + R M +L
Sbjct: 207 YIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLE 266
Query: 324 RVLPPQL--------LLKFPKEASFCLWLLHPEPSGRPKMGELL 359
+++ P L L KF A CL L RP MG++L
Sbjct: 267 QIVDPNLADKIRPESLRKFGDTAVKCLAL---SSEDRPSMGDVL 307
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 32.7 bits (73), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 7/68 (10%)
Query: 237 VLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYR 296
+LV E K+ D V+ + ++E F + T Y SPE L G S SDI+
Sbjct: 139 ILVNSRGEIKLCDFGVSGQLIDEMANEF-------VGTRSYMSPERLQGTHYSVQSDIWS 191
Query: 297 LGVLLFEL 304
+G+ L E+
Sbjct: 192 MGLSLVEM 199
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 32.3 bits (72), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 12/62 (19%)
Query: 271 LMETNWYASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRVLPPQL 330
++ T Y +PE L G ++ SDIY GV+L E+ +E HR PQL
Sbjct: 186 IVGTTAYXAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDE---------HR--EPQL 233
Query: 331 LL 332
LL
Sbjct: 234 LL 235
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 32.3 bits (72), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 12/62 (19%)
Query: 271 LMETNWYASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRVLPPQL 330
++ T Y +PE L G ++ SDIY GV+L E+ +E HR PQL
Sbjct: 195 IVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDE---------HR--EPQL 242
Query: 331 LL 332
LL
Sbjct: 243 LL 244
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 32.3 bits (72), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 12/62 (19%)
Query: 271 LMETNWYASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRVLPPQL 330
++ T Y +PE L G ++ SDIY GV+L E+ +E HR PQL
Sbjct: 195 IVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDE---------HR--EPQL 242
Query: 331 LL 332
LL
Sbjct: 243 LL 244
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 32.3 bits (72), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 12/62 (19%)
Query: 271 LMETNWYASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRVLPPQL 330
++ T Y +PE L G ++ SDIY GV+L E+ +E HR PQL
Sbjct: 189 IVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDE---------HR--EPQL 236
Query: 331 LL 332
LL
Sbjct: 237 LL 238
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 32.3 bits (72), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 8/90 (8%)
Query: 277 YASPEELAGAPVSCASDIYRLGVLLFELF----CPFSTGEEKTRTMSSLRH--RVLPPQL 330
+ +PE + S SD++ GVLL+E+F P+ + S LR R+ P+
Sbjct: 267 WMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDEDFCSRLREGMRMRAPE- 325
Query: 331 LLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360
P+ L H +P RP+ EL++
Sbjct: 326 -YSTPEIYQIMLDCWHRDPKERPRFAELVE 354
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 50/112 (44%), Gaps = 14/112 (12%)
Query: 216 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLME-- 273
P+N L A C + +G L + + N + + + E + F Q +L +
Sbjct: 137 PSNILLNAECHVKVADFG----LSRSFVNIRRVTNNIPL-SINENTENFDDDQPILTDYV 191
Query: 274 -TNWYASPEELAGAP-VSCASDIYRLGVLLFELFC--PFSTGEEKTRTMSSL 321
T WY +PE L G+ + D++ LG +L E+ C P G + TM+ L
Sbjct: 192 ATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPG---SSTMNQL 240
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 6/89 (6%)
Query: 277 YASPEELAGAPVSCASDIYRLGVLLFELFC---PFS-TGEEKTRTMSSLRHRVLPPQLLL 332
+ +PE G+ S D++ G++L+E+ PF G R M ++ + PP L+
Sbjct: 169 WMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPP-LIK 227
Query: 333 KFPKEA-SFCLWLLHPEPSGRPKMGELLQ 360
PK S +PS RP M E+++
Sbjct: 228 NLPKPIESLMTRCWSKDPSQRPSMEEIVK 256
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 6/89 (6%)
Query: 277 YASPEELAGAPVSCASDIYRLGVLLFELFC---PFS-TGEEKTRTMSSLRHRVLPPQLLL 332
+ +PE G+ S D++ G++L+E+ PF G R M ++ + PP L+
Sbjct: 170 WMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPP-LIK 228
Query: 333 KFPKEA-SFCLWLLHPEPSGRPKMGELLQ 360
PK S +PS RP M E+++
Sbjct: 229 NLPKPIESLMTRCWSKDPSQRPSMEEIVK 257
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 274 TNWYASPEELAGAPVSCASDIYRLGVLLFELFCPF 308
T Y +PE LA P S A D + +GV+ + L C +
Sbjct: 185 TPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGY 219
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 47/107 (43%), Gaps = 29/107 (27%)
Query: 69 VELTHGDHLRNQGGL-----SGVCE--------------NEAAIDPFVHAIEWGDVSLRQ 109
+EL HG HL ++ + +G C NE AI+ +H R+
Sbjct: 107 MELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHG-------FRE 159
Query: 110 WLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSS 156
LD +R + +I RQI ++ H+QGI +++P F+ S+
Sbjct: 160 SLDFVQREKLIS---NIMRQIFSALHYLHNQGICHRDIKPENFLFST 203
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 274 TNWYASPEELAGAPVSCASDIYRLGVLLFELFCPF 308
T Y +PE LA P S A D + +GV+ + L C +
Sbjct: 181 TPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGY 215
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 274 TNWYASPEELAGAPVSCASDIYRLGVLLFELFCPF 308
T Y +PE LA P S A D + +GV+ + L C +
Sbjct: 181 TPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGY 215
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 274 TNWYASPEELAGAPVSCASDIYRLGVLLFELFCPF 308
T Y +PE LA P S A D + +GV+ + L C +
Sbjct: 181 TPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGY 215
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 277 YASPEELAGAPVSCASDIYRLGVLLFEL---FCPFSTGEEKT 315
+ +PE L A DI+ LGVLL+ + + PF+ G + T
Sbjct: 186 FVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDT 227
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 274 TNWYASPEELAGAPVSCASDIYRLGVLLFELFCPF 308
T Y +PE LA P S A D + +GV+ + L C +
Sbjct: 181 TPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGY 215
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Query: 276 WYASPEELAGAPVSCASDIYRLGVLLFELF 305
WYA PE L+ S SD++ GV+L+ELF
Sbjct: 183 WYA-PESLSDNIFSRQSDVWSFGVVLYELF 211
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 7/68 (10%)
Query: 237 VLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYR 296
+LV E K+ D V+ + ++ F + T Y SPE L G S SDI+
Sbjct: 136 ILVNSRGEIKLCDFGVSGQLIDSMANSF-------VGTRSYMSPERLQGTHYSVQSDIWS 188
Query: 297 LGVLLFEL 304
+G+ L E+
Sbjct: 189 MGLSLVEM 196
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 7/68 (10%)
Query: 237 VLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYR 296
+LV E K+ D V+ + ++ F + T Y SPE L G S SDI+
Sbjct: 136 ILVNSRGEIKLCDFGVSGQLIDSMANSF-------VGTRSYMSPERLQGTHYSVQSDIWS 188
Query: 297 LGVLLFEL 304
+G+ L E+
Sbjct: 189 MGLSLVEM 196
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 73/185 (39%), Gaps = 22/185 (11%)
Query: 123 CLHIFRQIVEIVYAAHSQGIVVHNV-RPSCFVMSSFNHVSFIEXXXXXXXXXXXHEEGLN 181
L R+I + + H I + N+ RP F +FN V I+ + L+
Sbjct: 53 ALRTLREIKILKHFKHENIITIFNIQRPDSF--ENFNEVYIIQELMQTDLHRVISTQMLS 110
Query: 182 TQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEG 241
+++ + + +L + R DL+ P+N L ++C +G ++ E
Sbjct: 111 DDHIQYFIYQTLRAVKVLHGSNVIHR-DLK----PSNLLINSNCDLKVCDFGLARIIDES 165
Query: 242 MQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPE-ELAGAPVSCASDIYRLGVL 300
+ N E ++ + + T WY +PE L A S A D++ G +
Sbjct: 166 AAD--------NSEPTGQQS-----GMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCI 212
Query: 301 LFELF 305
L ELF
Sbjct: 213 LAELF 217
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 7/68 (10%)
Query: 237 VLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYR 296
+LV E K+ D V+ + ++ F + T Y SPE L G S SDI+
Sbjct: 136 ILVNSRGEIKLCDFGVSGQLIDSMANSF-------VGTRSYMSPERLQGTHYSVQSDIWS 188
Query: 297 LGVLLFEL 304
+G+ L E+
Sbjct: 189 MGLSLVEM 196
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 7/68 (10%)
Query: 237 VLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYR 296
+LV E K+ D V+ + ++ F + T Y SPE L G S SDI+
Sbjct: 136 ILVNSRGEIKLCDFGVSGQLIDSMANSF-------VGTRSYMSPERLQGTHYSVQSDIWS 188
Query: 297 LGVLLFEL 304
+G+ L E+
Sbjct: 189 MGLSLVEM 196
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 7/68 (10%)
Query: 237 VLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYR 296
+LV E K+ D V+ + ++ F + T Y SPE L G S SDI+
Sbjct: 136 ILVNSRGEIKLCDFGVSGQLIDSMANSF-------VGTRSYMSPERLQGTHYSVQSDIWS 188
Query: 297 LGVLLFEL 304
+G+ L E+
Sbjct: 189 MGLSLVEM 196
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 30.8 bits (68), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Query: 276 WYASPEELAGAPVSCASDIYRLGVLLFELF 305
WYA PE L+ S SD++ GV+L+ELF
Sbjct: 184 WYA-PESLSDNIFSRQSDVWSFGVVLYELF 212
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 30.8 bits (68), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Query: 276 WYASPEELAGAPVSCASDIYRLGVLLFELF 305
WYA PE L+ S SD++ GV+L+ELF
Sbjct: 196 WYA-PESLSDNIFSRQSDVWSFGVVLYELF 224
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 30.8 bits (68), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 21/39 (53%)
Query: 126 IFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIE 164
+FRQIV V HSQG +++P + ++ + I+
Sbjct: 113 VFRQIVSAVAYVHSQGYAHRDLKPENLLFDEYHKLKLID 151
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Query: 276 WYASPEELAGAPVSCASDIYRLGVLLFELF 305
WYA PE L+ S SD++ GV+L+ELF
Sbjct: 180 WYA-PESLSDNIFSRQSDVWSFGVVLYELF 208
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 7/68 (10%)
Query: 237 VLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYR 296
+LV E K+ D V+ + ++ F + T Y SPE L G S SDI+
Sbjct: 163 ILVNSRGEIKLCDFGVSGQLIDSMANSF-------VGTRSYMSPERLQGTHYSVQSDIWS 215
Query: 297 LGVLLFEL 304
+G+ L E+
Sbjct: 216 MGLSLVEM 223
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 7/68 (10%)
Query: 237 VLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYR 296
+LV E K+ D V+ + ++ F + T Y SPE L G S SDI+
Sbjct: 198 ILVNSRGEIKLCDFGVSGQLIDSMANSF-------VGTRSYMSPERLQGTHYSVQSDIWS 250
Query: 297 LGVLLFEL 304
+G+ L E+
Sbjct: 251 MGLSLVEM 258
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 30.4 bits (67), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 7/68 (10%)
Query: 237 VLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYR 296
+LV E K+ D V+ + ++ F + T Y +PE L G S SDI+
Sbjct: 146 ILVNSRGEIKLCDFGVSGQLIDSMANSF-------VGTRSYMAPERLQGTHYSVQSDIWS 198
Query: 297 LGVLLFEL 304
+G+ L EL
Sbjct: 199 MGLSLVEL 206
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Query: 274 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEE 313
T Y SPE L S +SD++ LG ++++L PF G E
Sbjct: 197 TAQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPPFRAGNE 239
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 11/90 (12%)
Query: 277 YASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGEEKTRTMSSL--RHRVLPPQLLLKF 334
+ +PE + + S SD++ GVLL+EL TGE R + L + V +L L
Sbjct: 180 WMAPEVIRASMFSKGSDVWSYGVLLWELL----TGEVPFRGIDGLAVAYGVAMNKLALPI 235
Query: 335 PKE-----ASFCLWLLHPEPSGRPKMGELL 359
P A +P+P RP +L
Sbjct: 236 PSTCPEPFAKLMEDCWNPDPHSRPSFTNIL 265
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 30.0 bits (66), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 10/91 (10%)
Query: 277 YASPEELAGAPVSCASDIYRLGVLLFELF----CPF---STGEEKTRTMSSLRHRVLPPQ 329
+ +PE + + SD++ GVLL+E+F P+ EE R + R+ P
Sbjct: 212 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFXRRLKE-GTRMRAPD 270
Query: 330 LLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360
+ W H EPS RP EL++
Sbjct: 271 YTTPEMYQTMLDCW--HGEPSQRPTFSELVE 299
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 29.6 bits (65), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 73/185 (39%), Gaps = 22/185 (11%)
Query: 123 CLHIFRQIVEIVYAAHSQGIVVHNV-RPSCFVMSSFNHVSFIEXXXXXXXXXXXHEEGLN 181
L R+I + + H I + N+ RP F +FN V I+ + L+
Sbjct: 53 ALRTLREIKILKHFKHENIITIFNIQRPDSF--ENFNEVYIIQELMQTDLHRVISTQMLS 110
Query: 182 TQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEG 241
+++ + + +L + R DL+ P+N L ++C +G ++ E
Sbjct: 111 DDHIQYFIYQTLRAVKVLHGSNVIHR-DLK----PSNLLINSNCDLKVCDFGLARIIDES 165
Query: 242 MQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPE-ELAGAPVSCASDIYRLGVL 300
++ E Q M + + T WY +PE L A S A D++ G +
Sbjct: 166 AADNS-----------EPTGQQSGMTE--YVATRWYRAPEVMLTSAKYSRAMDVWSCGCI 212
Query: 301 LFELF 305
L ELF
Sbjct: 213 LAELF 217
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 29.6 bits (65), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 10/91 (10%)
Query: 277 YASPEELAGAPVSCASDIYRLGVLLFELF----CPF---STGEEKTRTMSSLRHRVLPPQ 329
+ +PE + + SD++ GVLL+E+F P+ EE R + R+ P
Sbjct: 259 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE-GTRMRAPD 317
Query: 330 LLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360
+ W H EPS RP EL++
Sbjct: 318 YTTPEMYQTMLDCW--HGEPSQRPTFSELVE 346
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 29.6 bits (65), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Query: 237 VLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYR 296
VLVE + KI D + + +E K+ +K WYA PE L + ASD++
Sbjct: 145 VLVESEHQVKIGDFGL-TKAIETDKEXXTVKDDRDSPVFWYA-PECLMQSKFYIASDVWS 202
Query: 297 LGVLLFELF 305
GV L EL
Sbjct: 203 FGVTLHELL 211
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 29.6 bits (65), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 73/185 (39%), Gaps = 22/185 (11%)
Query: 123 CLHIFRQIVEIVYAAHSQGIVVHNV-RPSCFVMSSFNHVSFIEXXXXXXXXXXXHEEGLN 181
L R+I + + H I + N+ RP F +FN V I+ + L+
Sbjct: 53 ALRTLREIKILKHFKHENIITIFNIQRPDSF--ENFNEVYIIQELMQTDLHRVISTQMLS 110
Query: 182 TQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEG 241
+++ + + +L + R DL+ P+N L ++C +G ++ E
Sbjct: 111 DDHIQYFIYQTLRAVKVLHGSNVIHR-DLK----PSNLLINSNCDLKVCDFGLARIIDES 165
Query: 242 MQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPE-ELAGAPVSCASDIYRLGVL 300
++ E Q M + + T WY +PE L A S A D++ G +
Sbjct: 166 AADNS-----------EPTGQQSGMTE--XVATRWYRAPEVMLTSAKYSRAMDVWSCGCI 212
Query: 301 LFELF 305
L ELF
Sbjct: 213 LAELF 217
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 29.6 bits (65), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 10/91 (10%)
Query: 277 YASPEELAGAPVSCASDIYRLGVLLFELF----CPF---STGEEKTRTMSSLRHRVLPPQ 329
+ +PE + + SD++ GVLL+E+F P+ EE R + R+ P
Sbjct: 268 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE-GTRMRAPD 326
Query: 330 LLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360
+ W H EPS RP EL++
Sbjct: 327 YTTPEMYQTMLDCW--HGEPSQRPTFSELVE 355
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 29.6 bits (65), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Query: 237 VLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYR 296
VLVE + KI D + + +E K+ +K WYA PE L + ASD++
Sbjct: 157 VLVESEHQVKIGDFGL-TKAIETDKEXXTVKDDRDSPVFWYA-PECLMQSKFYIASDVWS 214
Query: 297 LGVLLFELF 305
GV L EL
Sbjct: 215 FGVTLHELL 223
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 29.6 bits (65), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 125 HIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSS 156
H +QI+E + HS GIV N++P +++S
Sbjct: 132 HCIQQILESIAYCHSNGIVHRNLKPENLLLAS 163
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 29.6 bits (65), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 10/91 (10%)
Query: 277 YASPEELAGAPVSCASDIYRLGVLLFELF----CPF---STGEEKTRTMSSLRHRVLPPQ 329
+ +PE + + SD++ GVLL+E+F P+ EE R + R+ P
Sbjct: 266 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE-GTRMRAPD 324
Query: 330 LLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360
+ W H EPS RP EL++
Sbjct: 325 YTTPEMYQTMLDCW--HGEPSQRPTFSELVE 353
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 29.6 bits (65), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 10/91 (10%)
Query: 277 YASPEELAGAPVSCASDIYRLGVLLFELF----CPF---STGEEKTRTMSSLRHRVLPPQ 329
+ +PE + + SD++ GVLL+E+F P+ EE R + R+ P
Sbjct: 207 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE-GTRMRAPD 265
Query: 330 LLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360
+ W H EPS RP EL++
Sbjct: 266 YTTPEMYQTMLDCW--HGEPSQRPTFSELVE 294
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 29.6 bits (65), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 10/91 (10%)
Query: 277 YASPEELAGAPVSCASDIYRLGVLLFELF----CPF---STGEEKTRTMSSLRHRVLPPQ 329
+ +PE + + SD++ GVLL+E+F P+ EE R + R+ P
Sbjct: 207 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE-GTRMRAPD 265
Query: 330 LLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360
+ W H EPS RP EL++
Sbjct: 266 YTTPEMYQTMLDCW--HGEPSQRPTFSELVE 294
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 29.6 bits (65), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 10/91 (10%)
Query: 277 YASPEELAGAPVSCASDIYRLGVLLFELF----CPF---STGEEKTRTMSSLRHRVLPPQ 329
+ +PE + + SD++ GVLL+E+F P+ EE R + R+ P
Sbjct: 261 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE-GTRMRAPD 319
Query: 330 LLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360
+ W H EPS RP EL++
Sbjct: 320 YTTPEMYQTMLDCW--HGEPSQRPTFSELVE 348
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 29.6 bits (65), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 10/91 (10%)
Query: 277 YASPEELAGAPVSCASDIYRLGVLLFELF----CPF---STGEEKTRTMSSLRHRVLPPQ 329
+ +PE + + SD++ GVLL+E+F P+ EE R + R+ P
Sbjct: 207 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE-GTRMRAPD 265
Query: 330 LLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360
+ W H EPS RP EL++
Sbjct: 266 YTTPEMYQTMLDCW--HGEPSQRPTFSELVE 294
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 29.6 bits (65), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 10/91 (10%)
Query: 277 YASPEELAGAPVSCASDIYRLGVLLFELF----CPF---STGEEKTRTMSSLRHRVLPPQ 329
+ +PE + + SD++ GVLL+E+F P+ EE R + R+ P
Sbjct: 207 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE-GTRMRAPD 265
Query: 330 LLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360
+ W H EPS RP EL++
Sbjct: 266 YTTPEMYQTMLDCW--HGEPSQRPTFSELVE 294
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 29.6 bits (65), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 10/91 (10%)
Query: 277 YASPEELAGAPVSCASDIYRLGVLLFELF----CPF---STGEEKTRTMSSLRHRVLPPQ 329
+ +PE + + SD++ GVLL+E+F P+ EE R + R+ P
Sbjct: 216 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE-GTRMRAPD 274
Query: 330 LLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360
+ W H EPS RP EL++
Sbjct: 275 YTTPEMYQTMLDCW--HGEPSQRPTFSELVE 303
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 29.6 bits (65), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 10/91 (10%)
Query: 277 YASPEELAGAPVSCASDIYRLGVLLFELF----CPF---STGEEKTRTMSSLRHRVLPPQ 329
+ +PE + + SD++ GVLL+E+F P+ EE R + R+ P
Sbjct: 212 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE-GTRMRAPD 270
Query: 330 LLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360
+ W H EPS RP EL++
Sbjct: 271 YTTPEMYQTMLDCW--HGEPSQRPTFSELVE 299
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 29.3 bits (64), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 10/91 (10%)
Query: 277 YASPEELAGAPVSCASDIYRLGVLLFELF----CPF---STGEEKTRTMSSLRHRVLPPQ 329
+ +PE + + SD++ GVLL+E+F P+ EE R + R+ P
Sbjct: 216 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE-GTRMRAPD 274
Query: 330 LLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360
+ W H EPS RP EL++
Sbjct: 275 YTTPEMYQTMLDCW--HGEPSQRPTFSELVE 303
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 29.3 bits (64), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 10/91 (10%)
Query: 277 YASPEELAGAPVSCASDIYRLGVLLFELF----CPF---STGEEKTRTMSSLRHRVLPPQ 329
+ +PE + + SD++ GVLL+E+F P+ EE R + R+ P
Sbjct: 216 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE-GTRMRAPD 274
Query: 330 LLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360
+ W H EPS RP EL++
Sbjct: 275 YTTPEMYQTMLDCW--HGEPSQRPTFSELVE 303
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 29.3 bits (64), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 10/91 (10%)
Query: 277 YASPEELAGAPVSCASDIYRLGVLLFELF----CPF---STGEEKTRTMSSLRHRVLPPQ 329
+ +PE + + SD++ GVLL+E+F P+ EE R + R+ P
Sbjct: 218 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE-GTRMRAPD 276
Query: 330 LLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360
+ W H EPS RP EL++
Sbjct: 277 YTTPEMYQTMLDCW--HGEPSQRPTFSELVE 305
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 29.3 bits (64), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 10/91 (10%)
Query: 277 YASPEELAGAPVSCASDIYRLGVLLFELF----CPF---STGEEKTRTMSSLRHRVLPPQ 329
+ +PE + + SD++ GVLL+E+F P+ EE R + R+ P
Sbjct: 216 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE-GTRMRAPD 274
Query: 330 LLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360
+ W H EPS RP EL++
Sbjct: 275 YTTPEMYQTMLDCW--HGEPSQRPTFSELVE 303
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 29.3 bits (64), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 10/91 (10%)
Query: 277 YASPEELAGAPVSCASDIYRLGVLLFELF----CPF---STGEEKTRTMSSLRHRVLPPQ 329
+ +PE + + SD++ GVLL+E+F P+ EE R + R+ P
Sbjct: 216 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE-GTRMRAPD 274
Query: 330 LLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360
+ W H EPS RP EL++
Sbjct: 275 YTTPEMYQTMLDCW--HGEPSQRPTFSELVE 303
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 29.3 bits (64), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 125 HIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSS 156
H RQI+E + H I+ +V+P C +++S
Sbjct: 134 HYMRQILEALRYCHDNNIIHRDVKPHCVLLAS 165
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 29.3 bits (64), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 17/70 (24%), Positives = 31/70 (44%), Gaps = 4/70 (5%)
Query: 271 LMETNWYASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRVLPPQL 330
++ T Y +PE + +SD++ G +L EL+ TG RT + H + +
Sbjct: 219 IINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELY----TGSLLFRTHEHMEHLAMMESI 274
Query: 331 LLKFPKEASF 340
+ PK +
Sbjct: 275 IQPIPKNMLY 284
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 29.3 bits (64), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 10/91 (10%)
Query: 277 YASPEELAGAPVSCASDIYRLGVLLFELF----CPF---STGEEKTRTMSSLRHRVLPPQ 329
+ +PE + + SD++ GVLL+E+F P+ EE R + R+ P
Sbjct: 253 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE-GTRMRAPD 311
Query: 330 LLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360
+ W H EPS RP EL++
Sbjct: 312 YTTPEMYQTMLDCW--HGEPSQRPTFSELVE 340
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 29.3 bits (64), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 125 HIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSS 156
H RQI+E + H I+ +V+P C +++S
Sbjct: 136 HYMRQILEALRYCHDNNIIHRDVKPHCVLLAS 167
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 29.3 bits (64), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 125 HIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSS 156
H +QI+E + HS GIV N++P +++S
Sbjct: 109 HCIQQILESIAYCHSNGIVHRNLKPENLLLAS 140
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 29.3 bits (64), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 125 HIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSS 156
H +QI+E + HS GIV N++P +++S
Sbjct: 109 HCIQQILESIAYCHSNGIVHRNLKPENLLLAS 140
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 28.9 bits (63), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 125 HIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSS 156
H +QI+E + HS GIV N++P +++S
Sbjct: 108 HCIQQILESIAYCHSNGIVHRNLKPENLLLAS 139
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.135 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,237,111
Number of Sequences: 62578
Number of extensions: 754175
Number of successful extensions: 2294
Number of sequences better than 100.0: 154
Number of HSP's better than 100.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 85
Number of HSP's that attempted gapping in prelim test: 2162
Number of HSP's gapped (non-prelim): 188
length of query: 720
length of database: 14,973,337
effective HSP length: 106
effective length of query: 614
effective length of database: 8,340,069
effective search space: 5120802366
effective search space used: 5120802366
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)