Query 004989
Match_columns 720
No_of_seqs 736 out of 3609
Neff 7.9
Searched_HMMs 46136
Date Thu Mar 28 16:14:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004989.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/004989hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00181 protein SPA1-RELATED; 100.0 3.5E-70 7.6E-75 654.5 46.4 580 15-716 1-600 (793)
2 KOG0615 Serine/threonine prote 100.0 2.7E-43 5.9E-48 365.3 14.0 250 23-368 171-444 (475)
3 KOG0581 Mitogen-activated prot 100.0 1.1E-39 2.5E-44 336.6 14.6 208 66-369 126-343 (364)
4 KOG0575 Polo-like serine/threo 100.0 2.1E-38 4.6E-43 344.4 16.7 240 29-367 23-275 (592)
5 KOG0593 Predicted protein kina 100.0 1.2E-38 2.6E-43 318.8 13.3 216 57-366 39-289 (396)
6 KOG0591 NIMA (never in mitosis 100.0 7.7E-39 1.7E-43 317.3 11.4 197 66-355 67-275 (375)
7 KOG0588 Serine/threonine prote 100.0 1.8E-38 4E-43 345.4 15.4 237 39-373 33-275 (786)
8 KOG0598 Ribosomal protein S6 k 100.0 1.4E-38 3E-43 328.6 10.9 225 66-386 74-307 (357)
9 KOG0661 MAPK related serine/th 100.0 2.6E-38 5.6E-43 333.5 12.3 208 66-367 57-297 (538)
10 KOG0592 3-phosphoinositide-dep 100.0 1.4E-37 3.1E-42 332.5 15.3 216 66-367 122-344 (604)
11 KOG0198 MEKK and related serin 100.0 4.9E-37 1.1E-41 322.1 16.8 216 64-369 61-284 (313)
12 KOG0583 Serine/threonine prote 100.0 9.6E-37 2.1E-41 331.6 17.5 204 64-366 66-280 (370)
13 KOG0660 Mitogen-activated prot 100.0 3.5E-37 7.5E-42 317.0 11.3 245 40-374 45-323 (359)
14 KOG0600 Cdc2-related protein k 100.0 2.5E-36 5.3E-41 320.7 16.1 234 42-367 142-406 (560)
15 KOG0578 p21-activated serine/t 100.0 3.2E-36 6.9E-41 325.0 16.0 228 40-367 296-529 (550)
16 KOG0605 NDR and related serine 100.0 1.2E-36 2.7E-41 325.8 11.6 278 60-393 186-476 (550)
17 KOG0033 Ca2+/calmodulin-depend 100.0 7.5E-36 1.6E-40 290.6 15.4 208 63-367 56-273 (355)
18 KOG0616 cAMP-dependent protein 100.0 3.2E-36 7E-41 301.1 11.0 214 66-381 93-318 (355)
19 KOG0611 Predicted serine/threo 100.0 5.1E-36 1.1E-40 308.8 12.7 227 42-367 78-309 (668)
20 KOG0595 Serine/threonine-prote 100.0 1.1E-35 2.4E-40 309.4 14.2 213 65-368 57-275 (429)
21 KOG0663 Protein kinase PITSLRE 100.0 1.2E-35 2.6E-40 301.0 13.8 235 40-369 99-369 (419)
22 KOG0610 Putative serine/threon 100.0 5.5E-35 1.2E-39 304.1 18.9 272 63-373 123-404 (459)
23 KOG0659 Cdk activating kinase 100.0 1.8E-35 4E-40 291.8 14.3 235 40-369 25-289 (318)
24 KOG0192 Tyrosine kinase specif 100.0 2E-34 4.4E-39 310.9 17.6 207 61-360 83-298 (362)
25 KOG0585 Ca2+/calmodulin-depend 100.0 1E-34 2.2E-39 305.8 14.3 218 63-369 154-380 (576)
26 KOG1035 eIF-2alpha kinase GCN2 100.0 2.2E-34 4.7E-39 331.2 17.7 200 95-366 670-876 (1351)
27 KOG0599 Phosphorylase kinase g 100.0 6E-35 1.3E-39 288.1 10.5 231 41-367 41-289 (411)
28 KOG0594 Protein kinase PCTAIRE 100.0 5.7E-34 1.2E-38 294.3 15.9 239 43-372 37-313 (323)
29 KOG0577 Serine/threonine prote 100.0 2.8E-34 6E-39 307.6 13.5 242 30-370 37-287 (948)
30 KOG0582 Ste20-like serine/thre 100.0 4.7E-34 1E-38 299.3 13.7 234 43-369 52-301 (516)
31 KOG0597 Serine-threonine prote 100.0 2.5E-34 5.3E-39 307.4 11.6 206 66-369 50-259 (808)
32 KOG0032 Ca2+/calmodulin-depend 100.0 5.2E-33 1.1E-37 302.4 21.3 241 29-367 40-299 (382)
33 KOG0589 Serine/threonine prote 100.0 9.1E-34 2E-38 304.6 14.1 211 63-367 49-264 (426)
34 cd05612 STKc_PRKX_like Catalyt 100.0 9.9E-34 2.1E-38 300.3 14.2 203 64-367 48-260 (291)
35 PTZ00263 protein kinase A cata 100.0 1.2E-33 2.7E-38 305.1 14.9 204 63-367 64-277 (329)
36 KOG0694 Serine/threonine prote 100.0 3.8E-34 8.2E-39 314.4 10.5 221 75-394 427-658 (694)
37 cd05571 STKc_PKB Catalytic dom 100.0 2.4E-33 5.2E-38 302.0 16.3 207 63-367 41-257 (323)
38 cd05585 STKc_YPK1_like Catalyt 100.0 2.9E-33 6.3E-38 299.8 15.8 207 63-367 39-253 (312)
39 KOG0658 Glycogen synthase kina 100.0 2.8E-34 6E-39 296.1 7.4 214 66-370 66-315 (364)
40 cd07869 STKc_PFTAIRE1 Catalyti 100.0 6E-33 1.3E-37 295.8 16.6 214 62-369 48-296 (303)
41 cd07859 STKc_TDY_MAPK_plant Ca 100.0 6.7E-33 1.5E-37 299.5 16.8 219 63-369 45-298 (338)
42 cd07871 STKc_PCTAIRE3 Catalyti 100.0 7.4E-33 1.6E-37 293.1 16.7 208 63-364 49-288 (288)
43 PTZ00426 cAMP-dependent protei 100.0 4E-33 8.6E-38 302.6 15.0 203 64-367 78-290 (340)
44 cd05631 STKc_GRK4 Catalytic do 100.0 3.1E-33 6.8E-38 295.5 13.4 209 63-368 46-268 (285)
45 KOG0604 MAP kinase-activated p 100.0 6.5E-33 1.4E-37 277.2 14.4 202 74-367 112-328 (400)
46 cd07862 STKc_CDK6 Catalytic do 100.0 1.4E-32 3E-37 290.5 17.5 205 69-364 56-290 (290)
47 KOG4721 Serine/threonine prote 100.0 8.8E-33 1.9E-37 295.1 15.5 244 12-365 120-368 (904)
48 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 9.9E-33 2.1E-37 298.3 16.2 204 65-367 49-263 (333)
49 KOG0579 Ste20-like serine/thre 100.0 6E-33 1.3E-37 298.6 13.9 210 66-369 78-297 (1187)
50 cd05626 STKc_LATS2 Catalytic d 100.0 1.9E-32 4.2E-37 301.9 18.3 257 63-367 47-311 (381)
51 cd05593 STKc_PKB_gamma Catalyt 100.0 1.6E-32 3.5E-37 296.3 16.8 207 63-367 41-257 (328)
52 KOG0580 Serine/threonine prote 100.0 3E-33 6.5E-38 272.5 9.9 245 24-367 22-279 (281)
53 cd07848 STKc_CDKL5 Catalytic d 100.0 2.6E-32 5.6E-37 288.0 17.6 207 64-364 47-287 (287)
54 cd05625 STKc_LATS1 Catalytic d 100.0 8.6E-33 1.9E-37 304.7 13.7 256 63-367 47-311 (382)
55 cd05573 STKc_ROCK_NDR_like Cat 100.0 1.4E-32 3.1E-37 298.7 15.1 235 65-367 49-291 (350)
56 KOG0596 Dual specificity; seri 100.0 1.9E-32 4.1E-37 293.1 15.3 229 43-367 386-633 (677)
57 cd07868 STKc_CDK8 Catalytic do 100.0 3E-32 6.4E-37 292.1 17.0 212 64-364 45-317 (317)
58 cd05595 STKc_PKB_beta Catalyti 100.0 2E-32 4.4E-37 294.8 15.6 205 64-367 42-257 (323)
59 cd05628 STKc_NDR1 Catalytic do 100.0 1.8E-32 4E-37 300.0 15.4 240 65-367 49-299 (363)
60 cd07876 STKc_JNK2 Catalytic do 100.0 4.3E-32 9.4E-37 296.5 17.8 212 63-369 66-323 (359)
61 cd05594 STKc_PKB_alpha Catalyt 100.0 3.2E-32 6.9E-37 293.5 16.5 208 63-367 41-258 (325)
62 PTZ00267 NIMA-related protein 100.0 3.6E-32 7.8E-37 308.3 17.6 211 64-367 112-329 (478)
63 PHA03212 serine/threonine kina 100.0 3.2E-32 6.9E-37 300.9 16.3 212 65-370 131-385 (391)
64 cd05599 STKc_NDR_like Catalyti 100.0 3.9E-32 8.4E-37 297.3 16.5 245 64-367 48-302 (364)
65 cd05590 STKc_nPKC_eta Catalyti 100.0 1.6E-32 3.5E-37 295.2 13.1 204 66-367 44-259 (320)
66 cd05598 STKc_LATS Catalytic do 100.0 2.6E-32 5.7E-37 300.1 15.0 251 64-367 48-307 (376)
67 cd05591 STKc_nPKC_epsilon Cata 100.0 4.1E-32 9E-37 292.1 16.1 204 66-367 44-260 (321)
68 cd07875 STKc_JNK1 Catalytic do 100.0 7.6E-32 1.7E-36 295.1 18.2 212 63-369 69-326 (364)
69 PTZ00283 serine/threonine prot 100.0 1.4E-31 3.1E-36 304.1 21.0 221 60-369 74-305 (496)
70 cd06649 PKc_MEK2 Catalytic dom 100.0 5.2E-32 1.1E-36 292.6 16.6 207 63-367 49-307 (331)
71 cd07878 STKc_p38beta_MAPK11 Ca 100.0 3.4E-32 7.4E-37 295.2 15.2 212 63-370 60-307 (343)
72 cd05629 STKc_NDR_like_fungal C 100.0 3.5E-32 7.5E-37 299.3 15.3 255 63-367 47-311 (377)
73 cd05601 STKc_CRIK Catalytic do 100.0 4.8E-32 1E-36 292.6 15.8 210 63-367 47-269 (330)
74 cd07874 STKc_JNK3 Catalytic do 100.0 4.2E-32 9E-37 296.1 15.3 214 62-369 61-319 (355)
75 cd07863 STKc_CDK4 Catalytic do 100.0 1.1E-31 2.3E-36 283.2 17.8 204 70-364 55-288 (288)
76 PTZ00036 glycogen synthase kin 100.0 5E-32 1.1E-36 303.9 15.5 214 65-369 107-359 (440)
77 cd05596 STKc_ROCK Catalytic do 100.0 7E-32 1.5E-36 296.3 16.2 206 66-367 92-310 (370)
78 PHA03209 serine/threonine kina 100.0 6.1E-32 1.3E-36 295.3 15.6 206 66-366 106-356 (357)
79 cd05588 STKc_aPKC Catalytic do 100.0 8.4E-32 1.8E-36 290.8 15.5 207 65-367 43-268 (329)
80 KOG0197 Tyrosine kinases [Sign 100.0 1.3E-31 2.7E-36 289.0 16.5 232 30-359 212-455 (468)
81 cd05627 STKc_NDR2 Catalytic do 100.0 9E-32 2E-36 294.2 15.7 241 64-367 48-299 (360)
82 cd05621 STKc_ROCK2 Catalytic d 100.0 1E-31 2.2E-36 294.9 16.0 206 66-367 92-310 (370)
83 cd05584 STKc_p70S6K Catalytic 100.0 1.4E-31 3E-36 288.3 16.7 207 64-367 47-262 (323)
84 cd05575 STKc_SGK Catalytic dom 100.0 1.1E-31 2.5E-36 288.9 15.9 201 70-367 49-257 (323)
85 cd05614 STKc_MSK2_N N-terminal 100.0 1.4E-31 3.1E-36 289.1 16.7 209 63-367 50-273 (332)
86 PHA02988 hypothetical protein; 100.0 1.1E-31 2.5E-36 283.6 15.5 203 63-360 64-274 (283)
87 cd05620 STKc_nPKC_delta Cataly 100.0 1.4E-31 2.9E-36 287.5 15.9 204 66-367 44-254 (316)
88 cd05586 STKc_Sck1_like Catalyt 100.0 1.3E-31 2.7E-36 289.4 15.4 206 66-367 42-259 (330)
89 cd05582 STKc_RSK_N N-terminal 100.0 1.3E-31 2.8E-36 287.8 15.3 207 63-367 44-260 (318)
90 cd05618 STKc_aPKC_iota Catalyt 100.0 1.5E-31 3.2E-36 288.9 15.8 206 66-367 44-268 (329)
91 cd05592 STKc_nPKC_theta_delta 100.0 1.7E-31 3.6E-36 286.9 16.0 203 67-367 45-254 (316)
92 cd05608 STKc_GRK1 Catalytic do 100.0 1.3E-31 2.9E-36 282.3 14.8 207 65-367 41-263 (280)
93 cd05607 STKc_GRK7 Catalytic do 100.0 2.4E-31 5.3E-36 279.8 16.7 207 66-367 42-260 (277)
94 cd05619 STKc_nPKC_theta Cataly 100.0 1.6E-31 3.4E-36 287.1 15.6 204 66-367 44-254 (316)
95 KOG0201 Serine/threonine prote 100.0 6.2E-33 1.3E-37 290.9 4.5 209 62-367 56-269 (467)
96 cd05570 STKc_PKC Catalytic dom 100.0 1.6E-31 3.4E-36 287.2 15.4 205 65-367 43-258 (318)
97 KOG4717 Serine/threonine prote 100.0 9.2E-32 2E-36 284.3 12.9 205 66-369 66-278 (864)
98 cd07853 STKc_NLK Catalytic dom 100.0 2.6E-31 5.6E-36 291.8 17.2 214 63-367 45-294 (372)
99 cd05587 STKc_cPKC Catalytic do 100.0 2.6E-31 5.6E-36 286.3 16.1 207 63-367 46-263 (324)
100 cd05102 PTKc_VEGFR3 Catalytic 100.0 3.4E-31 7.3E-36 286.8 17.1 206 64-360 57-329 (338)
101 cd07867 STKc_CDC2L6 Catalytic 100.0 3E-31 6.4E-36 284.0 16.2 212 64-364 45-317 (317)
102 KOG4279 Serine/threonine prote 100.0 7.8E-32 1.7E-36 292.8 11.6 226 48-367 601-838 (1226)
103 KOG0667 Dual-specificity tyros 100.0 1.2E-31 2.5E-36 295.0 13.1 205 66-367 231-508 (586)
104 cd05604 STKc_SGK3 Catalytic do 100.0 2.7E-31 5.8E-36 286.3 15.5 202 69-367 48-257 (325)
105 KOG0584 Serine/threonine prote 100.0 1.2E-31 2.6E-36 292.3 12.2 209 62-367 86-302 (632)
106 cd06650 PKc_MEK1 Catalytic dom 100.0 3.6E-31 7.9E-36 286.4 16.0 207 63-367 49-305 (333)
107 cd05589 STKc_PKN Catalytic dom 100.0 5.2E-31 1.1E-35 283.9 17.0 203 66-367 51-263 (324)
108 PHA03207 serine/threonine kina 100.0 3.3E-31 7.1E-36 293.2 15.5 210 65-367 134-381 (392)
109 cd06625 STKc_MEKK3_like Cataly 100.0 7.2E-31 1.6E-35 272.8 17.0 209 63-364 50-263 (263)
110 cd05616 STKc_cPKC_beta Catalyt 100.0 4.5E-31 9.7E-36 284.3 15.8 205 66-367 49-263 (323)
111 cd07872 STKc_PCTAIRE2 Catalyti 100.0 6.3E-31 1.4E-35 281.0 16.8 210 64-367 51-292 (309)
112 cd05603 STKc_SGK2 Catalytic do 100.0 5.6E-31 1.2E-35 283.2 15.9 202 69-367 48-257 (321)
113 cd05617 STKc_aPKC_zeta Catalyt 100.0 4.6E-31 1E-35 284.8 15.2 206 66-368 44-267 (327)
114 cd05597 STKc_DMPK_like Catalyt 100.0 6.5E-31 1.4E-35 284.1 16.2 208 66-367 50-272 (331)
115 cd05605 STKc_GRK4_like Catalyt 100.0 7.8E-31 1.7E-35 277.1 16.3 206 65-367 48-267 (285)
116 cd07839 STKc_CDK5 Catalytic do 100.0 6.6E-31 1.4E-35 276.7 15.4 206 65-364 47-284 (284)
117 cd05622 STKc_ROCK1 Catalytic d 100.0 6.6E-31 1.4E-35 288.6 15.8 207 65-367 91-310 (371)
118 PTZ00284 protein kinase; Provi 100.0 5.1E-31 1.1E-35 298.3 15.1 212 75-368 189-445 (467)
119 PLN00034 mitogen-activated pro 100.0 7.4E-31 1.6E-35 286.2 15.6 207 64-369 119-336 (353)
120 PHA03211 serine/threonine kina 100.0 8.1E-31 1.8E-35 294.2 16.0 210 65-366 208-460 (461)
121 cd08227 PK_STRAD_alpha Pseudok 100.0 1.2E-30 2.6E-35 281.3 16.6 215 65-367 47-313 (327)
122 KOG0666 Cyclin C-dependent kin 100.0 1.7E-31 3.6E-36 268.2 8.9 217 64-370 74-346 (438)
123 KOG4645 MAPKKK (MAP kinase kin 100.0 1.1E-31 2.3E-36 310.4 8.1 220 59-369 1275-1502(1509)
124 cd05602 STKc_SGK1 Catalytic do 100.0 1.4E-30 3.1E-35 280.6 16.3 201 69-367 48-257 (325)
125 PTZ00266 NIMA-related protein 100.0 9.7E-31 2.1E-35 307.9 15.5 227 63-366 58-300 (1021)
126 cd05630 STKc_GRK6 Catalytic do 100.0 1.4E-30 3E-35 275.3 15.1 207 65-367 48-267 (285)
127 cd05624 STKc_MRCK_beta Catalyt 100.0 1.6E-30 3.5E-35 281.0 15.6 208 66-367 50-272 (331)
128 cd06643 STKc_SLK Catalytic dom 100.0 3.5E-30 7.6E-35 271.2 17.8 210 64-367 49-268 (282)
129 cd05574 STKc_phototropin_like 100.0 3.1E-30 6.7E-35 276.4 17.5 242 63-369 47-297 (316)
130 cd06631 STKc_YSK4 Catalytic do 100.0 2.6E-30 5.6E-35 269.4 16.4 213 63-364 48-265 (265)
131 cd07873 STKc_PCTAIRE1 Catalyti 100.0 3.4E-30 7.3E-35 274.2 17.2 212 63-368 50-293 (301)
132 cd05623 STKc_MRCK_alpha Cataly 100.0 3.4E-30 7.4E-35 278.6 17.3 208 66-367 50-272 (332)
133 cd08223 STKc_Nek4 Catalytic do 100.0 4.4E-30 9.6E-35 265.9 17.2 208 63-364 45-257 (257)
134 cd06628 STKc_MAPKKK_Byr2_like 100.0 4E-30 8.7E-35 268.0 16.9 210 64-364 53-267 (267)
135 cd07861 STKc_CDK1_euk Catalyti 100.0 3.7E-30 8E-35 270.9 16.1 206 65-364 47-285 (285)
136 cd08529 STKc_FA2-like Catalyti 100.0 5.9E-30 1.3E-34 264.6 17.2 207 63-364 45-256 (256)
137 cd05572 STKc_cGK_PKG Catalytic 100.0 4.7E-30 1E-34 266.9 16.2 208 64-367 40-258 (262)
138 cd06651 STKc_MEKK3 Catalytic d 100.0 5.3E-30 1.2E-34 267.5 16.6 211 63-365 50-265 (266)
139 cd07865 STKc_CDK9 Catalytic do 100.0 9.2E-30 2E-34 271.1 18.0 215 63-364 57-310 (310)
140 cd05064 PTKc_EphR_A10 Catalyti 100.0 6.2E-30 1.3E-34 267.3 16.4 203 63-360 52-260 (266)
141 KOG0612 Rho-associated, coiled 100.0 5E-31 1.1E-35 301.4 8.6 236 58-393 118-369 (1317)
142 cd06644 STKc_STK10_LOK Catalyt 100.0 1.5E-29 3.2E-34 268.0 19.1 211 65-370 57-278 (292)
143 cd06611 STKc_SLK_like Catalyti 100.0 9.3E-30 2E-34 267.5 17.1 209 64-367 49-268 (280)
144 cd06637 STKc_TNIK Catalytic do 100.0 8.8E-30 1.9E-34 266.2 16.6 209 65-364 50-272 (272)
145 cd06645 STKc_MAP4K3 Catalytic 100.0 8.4E-30 1.8E-34 265.8 16.2 204 65-363 54-267 (267)
146 PHA03210 serine/threonine kina 100.0 5.5E-30 1.2E-34 291.8 16.0 211 64-367 210-460 (501)
147 cd07831 STKc_MOK Catalytic dom 100.0 1.6E-29 3.4E-34 265.5 18.3 205 65-364 45-282 (282)
148 cd05632 STKc_GRK5 Catalytic do 100.0 8.6E-30 1.9E-34 269.2 16.2 207 65-367 48-267 (285)
149 cd07855 STKc_ERK5 Catalytic do 100.0 4.9E-30 1.1E-34 277.4 14.5 224 63-373 50-306 (334)
150 cd08217 STKc_Nek2 Catalytic do 100.0 1.2E-29 2.5E-34 263.1 16.7 209 63-364 45-265 (265)
151 cd07860 STKc_CDK2_3 Catalytic 100.0 1.4E-29 3E-34 266.7 17.4 208 63-364 45-284 (284)
152 cd05615 STKc_cPKC_alpha Cataly 100.0 7.1E-30 1.5E-34 275.1 15.3 205 66-367 49-263 (323)
153 cd07850 STKc_JNK Catalytic dom 100.0 1E-29 2.2E-34 277.1 16.6 212 63-369 61-319 (353)
154 cd06612 STKc_MST1_2 Catalytic 100.0 1.1E-29 2.5E-34 262.5 16.0 205 65-364 46-256 (256)
155 cd06619 PKc_MKK5 Catalytic dom 100.0 1.4E-29 3.1E-34 266.4 16.7 207 65-372 47-264 (279)
156 KOG0986 G protein-coupled rece 100.0 2.3E-30 5E-35 271.3 10.5 208 66-369 234-454 (591)
157 cd06633 STKc_TAO3 Catalytic do 100.0 6.3E-29 1.4E-33 266.4 22.0 207 63-368 67-280 (313)
158 cd06615 PKc_MEK Catalytic doma 100.0 1.2E-29 2.6E-34 271.2 16.3 206 64-367 46-293 (308)
159 KOG0607 MAP kinase-interacting 100.0 2.8E-30 6.1E-35 260.1 10.6 220 60-367 118-367 (463)
160 PF00069 Pkinase: Protein kina 100.0 8.3E-31 1.8E-35 271.4 7.0 204 66-364 47-260 (260)
161 cd06654 STKc_PAK1 Catalytic do 100.0 1.3E-29 2.7E-34 269.5 16.2 210 64-369 64-278 (296)
162 cd07832 STKc_CCRK Catalytic do 100.0 1.6E-29 3.6E-34 265.9 16.9 210 63-365 45-286 (286)
163 cd06638 STKc_myosinIIIA Cataly 100.0 2.7E-29 5.7E-34 264.7 18.0 209 65-364 62-286 (286)
164 KOG1989 ARK protein kinase fam 100.0 2.5E-30 5.4E-35 292.8 10.8 209 66-360 83-306 (738)
165 cd06605 PKc_MAPKK Catalytic do 100.0 9E-30 1.9E-34 264.9 14.1 208 64-367 46-263 (265)
166 cd05048 PTKc_Ror Catalytic Dom 100.0 1.6E-29 3.5E-34 266.0 16.0 204 64-360 55-278 (283)
167 cd06639 STKc_myosinIIIB Cataly 100.0 2.3E-29 5E-34 266.2 17.3 210 65-365 66-291 (291)
168 cd05580 STKc_PKA Catalytic dom 100.0 1.8E-29 3.8E-34 267.2 16.4 205 63-367 47-260 (290)
169 cd05633 STKc_GRK3 Catalytic do 100.0 1.2E-29 2.6E-34 267.4 14.9 201 70-368 50-262 (279)
170 cd08220 STKc_Nek8 Catalytic do 100.0 2.7E-29 5.8E-34 259.7 17.2 206 63-364 45-256 (256)
171 cd06652 STKc_MEKK2 Catalytic d 100.0 2.2E-29 4.8E-34 262.5 16.7 211 63-365 50-265 (265)
172 cd05084 PTKc_Fes Catalytic dom 100.0 2.4E-29 5.1E-34 260.1 16.7 204 63-360 39-248 (252)
173 cd06609 STKc_MST3_like Catalyt 100.0 3.4E-29 7.4E-34 262.4 18.1 208 64-369 46-259 (274)
174 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 2.3E-29 5E-34 265.4 16.8 212 63-370 45-271 (286)
175 cd05104 PTKc_Kit Catalytic dom 100.0 1.7E-29 3.6E-34 277.9 16.3 204 65-360 86-369 (375)
176 cd06636 STKc_MAP4K4_6 Catalyti 100.0 1.6E-29 3.5E-34 266.0 15.5 211 63-364 58-282 (282)
177 KOG0662 Cyclin-dependent kinas 100.0 6.2E-30 1.3E-34 238.7 10.9 238 35-367 17-289 (292)
178 cd07844 STKc_PCTAIRE_like Cata 100.0 1.8E-29 4E-34 266.8 16.0 207 64-364 50-291 (291)
179 KOG0603 Ribosomal protein S6 k 100.0 5.8E-30 1.3E-34 280.3 12.4 193 69-364 368-566 (612)
180 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 4.7E-29 1E-33 263.6 19.0 213 63-370 45-275 (287)
181 cd07845 STKc_CDK10 Catalytic d 100.0 2.9E-29 6.3E-34 268.1 17.6 215 64-370 53-299 (309)
182 cd06607 STKc_TAO Catalytic dom 100.0 5.5E-29 1.2E-33 265.8 19.5 206 64-368 62-274 (307)
183 cd06655 STKc_PAK2 Catalytic do 100.0 2.3E-29 5E-34 267.6 16.4 209 64-368 63-276 (296)
184 cd08216 PK_STRAD Pseudokinase 100.0 3.1E-29 6.6E-34 268.2 17.4 222 60-368 42-302 (314)
185 cd06630 STKc_MEKK1 Catalytic d 100.0 2.6E-29 5.7E-34 261.8 16.3 212 63-365 49-268 (268)
186 cd06624 STKc_ASK Catalytic dom 100.0 2.7E-29 5.9E-34 262.3 16.3 208 63-364 51-268 (268)
187 KOG0586 Serine/threonine prote 100.0 1.2E-29 2.7E-34 276.4 14.0 208 65-370 103-315 (596)
188 cd08221 STKc_Nek9 Catalytic do 100.0 4.2E-29 9.1E-34 258.7 17.4 207 63-364 45-256 (256)
189 cd06634 STKc_TAO2 Catalytic do 100.0 8.4E-29 1.8E-33 264.7 19.8 209 63-370 61-276 (308)
190 cd06656 STKc_PAK3 Catalytic do 100.0 1.6E-29 3.5E-34 268.9 14.1 210 64-369 63-277 (297)
191 cd05106 PTKc_CSF-1R Catalytic 100.0 2.5E-29 5.5E-34 276.3 16.0 204 64-360 88-367 (374)
192 cd06635 STKc_TAO1 Catalytic do 100.0 1.7E-28 3.7E-33 263.4 21.9 207 63-368 71-284 (317)
193 cd07866 STKc_BUR1 Catalytic do 100.0 5.6E-29 1.2E-33 265.1 17.9 222 64-364 54-311 (311)
194 cd06613 STKc_MAP4K3_like Catal 100.0 4E-29 8.8E-34 259.3 16.2 204 65-363 48-262 (262)
195 cd07870 STKc_PFTAIRE2 Catalyti 100.0 5.9E-29 1.3E-33 263.1 17.6 208 63-364 49-291 (291)
196 cd06632 STKc_MEKK1_plant Catal 100.0 4.2E-29 9.1E-34 258.4 16.1 206 63-364 48-258 (258)
197 cd06659 STKc_PAK6 Catalytic do 100.0 3.1E-29 6.8E-34 266.7 15.5 209 64-369 65-279 (297)
198 KOG0669 Cyclin T-dependent kin 100.0 2.3E-29 4.9E-34 246.3 12.9 225 60-370 59-324 (376)
199 cd07842 STKc_CDK8_like Catalyt 100.0 3.3E-29 7.2E-34 267.7 15.6 211 65-364 50-316 (316)
200 cd05578 STKc_Yank1 Catalytic d 100.0 2.7E-29 5.9E-34 260.6 14.5 204 63-364 46-258 (258)
201 cd05609 STKc_MAST Catalytic do 100.0 6.3E-29 1.4E-33 265.1 17.6 222 65-367 49-279 (305)
202 cd08226 PK_STRAD_beta Pseudoki 100.0 2.3E-29 4.9E-34 271.6 14.3 218 63-367 45-314 (328)
203 cd06658 STKc_PAK5 Catalytic do 100.0 2.7E-29 5.9E-34 266.5 14.5 209 64-370 66-281 (292)
204 KOG0665 Jun-N-terminal kinase 100.0 4.9E-30 1.1E-34 259.4 8.2 214 58-365 56-314 (369)
205 cd06648 STKc_PAK_II Catalytic 100.0 6.3E-29 1.4E-33 262.6 17.2 207 65-369 64-277 (285)
206 PHA03390 pk1 serine/threonine- 100.0 4.5E-29 9.8E-34 261.2 15.8 193 75-366 67-267 (267)
207 cd06608 STKc_myosinIII_like Ca 100.0 3.4E-29 7.5E-34 261.3 14.8 209 64-364 49-275 (275)
208 cd08219 STKc_Nek3 Catalytic do 100.0 6.7E-29 1.5E-33 257.2 16.7 204 63-361 44-252 (255)
209 KOG2345 Serine/threonine prote 100.0 4.9E-30 1.1E-34 251.1 7.7 250 27-360 24-295 (302)
210 cd05115 PTKc_Zap-70 Catalytic 100.0 7.3E-29 1.6E-33 258.0 17.1 204 64-360 42-250 (257)
211 cd05113 PTKc_Btk_Bmx Catalytic 100.0 6.2E-29 1.4E-33 258.2 16.5 203 65-361 47-254 (256)
212 cd06617 PKc_MKK3_6 Catalytic d 100.0 4.6E-29 9.9E-34 262.3 15.6 204 70-368 53-268 (283)
213 cd05116 PTKc_Syk Catalytic dom 100.0 7.7E-29 1.7E-33 257.4 16.9 201 66-360 45-250 (257)
214 KOG4236 Serine/threonine prote 100.0 2.1E-29 4.5E-34 267.1 12.6 220 59-375 607-833 (888)
215 cd07849 STKc_ERK1_2_like Catal 100.0 6.2E-29 1.4E-33 269.0 16.7 219 63-370 49-301 (336)
216 cd08218 STKc_Nek1 Catalytic do 100.0 6.4E-29 1.4E-33 257.3 16.1 207 63-364 45-256 (256)
217 cd05579 STKc_MAST_like Catalyt 100.0 4.5E-29 9.7E-34 258.7 14.8 217 63-367 39-263 (265)
218 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 5.4E-29 1.2E-33 259.8 15.4 197 64-361 51-260 (262)
219 cd05096 PTKc_DDR1 Catalytic do 100.0 6.4E-29 1.4E-33 264.8 16.2 204 64-360 66-300 (304)
220 cd06640 STKc_MST4 Catalytic do 100.0 5.4E-29 1.2E-33 261.6 15.4 207 63-367 48-259 (277)
221 KOG1187 Serine/threonine prote 100.0 7E-29 1.5E-33 269.4 16.6 241 23-360 74-347 (361)
222 cd07843 STKc_CDC2L1 Catalytic 100.0 1.1E-28 2.3E-33 261.4 17.6 208 65-364 52-293 (293)
223 cd06629 STKc_MAPKKK_Bck1_like 100.0 1E-28 2.3E-33 258.2 17.2 206 66-364 57-272 (272)
224 cd05088 PTKc_Tie2 Catalytic do 100.0 5.8E-29 1.3E-33 265.3 15.5 203 63-361 53-276 (303)
225 KOG0983 Mitogen-activated prot 100.0 1.1E-29 2.3E-34 251.3 9.0 201 71-367 145-355 (391)
226 cd05577 STKc_GRK Catalytic dom 100.0 5.9E-29 1.3E-33 261.3 15.3 207 65-367 41-260 (277)
227 cd07877 STKc_p38alpha_MAPK14 C 100.0 4.2E-29 9E-34 271.6 14.6 212 63-370 62-309 (345)
228 cd05111 PTK_HER3 Pseudokinase 100.0 1.1E-28 2.4E-33 259.8 17.3 204 63-360 55-263 (279)
229 cd05114 PTKc_Tec_Rlk Catalytic 100.0 1.1E-28 2.4E-33 255.9 17.0 202 65-360 47-253 (256)
230 cd06626 STKc_MEKK4 Catalytic d 100.0 1.5E-28 3.2E-33 255.4 17.9 210 63-364 45-264 (264)
231 cd05093 PTKc_TrkB Catalytic do 100.0 9.7E-29 2.1E-33 261.3 16.8 204 64-360 54-274 (288)
232 cd05062 PTKc_IGF-1R Catalytic 100.0 9.3E-29 2E-33 259.7 16.6 205 64-361 56-274 (277)
233 cd07851 STKc_p38 Catalytic dom 100.0 5.5E-29 1.2E-33 270.3 15.3 210 65-370 62-307 (343)
234 cd05054 PTKc_VEGFR Catalytic d 100.0 6.7E-29 1.5E-33 269.2 15.8 205 65-360 58-328 (337)
235 cd06616 PKc_MKK4 Catalytic dom 100.0 5.8E-29 1.3E-33 262.6 14.9 210 63-367 48-273 (288)
236 cd05059 PTKc_Tec_like Catalyti 100.0 1.1E-28 2.3E-33 256.1 16.7 202 65-360 47-253 (256)
237 cd05082 PTKc_Csk Catalytic dom 100.0 8.1E-29 1.7E-33 256.9 15.7 199 64-360 46-251 (256)
238 cd05108 PTKc_EGFR Catalytic do 100.0 7.1E-29 1.5E-33 266.2 15.6 204 63-360 55-263 (316)
239 cd07880 STKc_p38gamma_MAPK12 C 100.0 6.1E-29 1.3E-33 270.1 15.2 212 63-370 60-307 (343)
240 cd05089 PTKc_Tie1 Catalytic do 100.0 1.3E-28 2.9E-33 261.6 17.5 202 63-360 48-270 (297)
241 cd05094 PTKc_TrkC Catalytic do 100.0 1.1E-28 2.5E-33 261.2 16.9 203 65-360 55-277 (291)
242 cd06642 STKc_STK25-YSK1 Cataly 100.0 5.4E-29 1.2E-33 261.4 14.3 207 63-367 48-259 (277)
243 cd07841 STKc_CDK7 Catalytic do 100.0 9.4E-29 2E-33 262.3 16.1 210 65-369 50-290 (298)
244 cd08228 STKc_Nek6 Catalytic do 100.0 1.1E-28 2.4E-33 257.2 16.3 205 62-360 47-260 (267)
245 cd00192 PTKc Catalytic domain 100.0 1.6E-28 3.4E-33 253.9 17.3 206 63-361 42-260 (262)
246 cd05606 STKc_beta_ARK Catalyti 100.0 9.6E-29 2.1E-33 260.2 15.8 202 69-368 49-262 (278)
247 cd05576 STKc_RPK118_like Catal 100.0 4.3E-29 9.3E-34 256.6 12.8 195 69-364 37-237 (237)
248 cd07857 STKc_MPK1 Catalytic do 100.0 9.4E-29 2E-33 267.2 16.1 220 64-370 48-301 (332)
249 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 8.9E-29 1.9E-33 257.2 15.3 202 65-360 47-255 (258)
250 cd05090 PTKc_Ror1 Catalytic do 100.0 1.2E-28 2.7E-33 259.5 16.6 206 63-361 53-279 (283)
251 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 1.8E-28 3.8E-33 258.7 17.7 209 63-360 52-278 (284)
252 cd07847 STKc_CDKL1_4 Catalytic 100.0 1.4E-28 3E-33 258.8 16.8 205 65-364 48-286 (286)
253 cd05049 PTKc_Trk Catalytic dom 100.0 1.3E-28 2.9E-33 258.4 16.4 204 64-360 55-276 (280)
254 cd05053 PTKc_FGFR Catalytic do 100.0 1.5E-28 3.3E-33 260.0 17.0 206 63-361 61-287 (293)
255 cd05611 STKc_Rim15_like Cataly 100.0 1.3E-28 2.9E-33 255.7 16.2 199 69-367 49-257 (260)
256 cd06646 STKc_MAP4K5 Catalytic 100.0 7.6E-29 1.7E-33 258.6 14.3 203 65-363 54-267 (267)
257 cd05052 PTKc_Abl Catalytic dom 100.0 1.7E-28 3.6E-33 255.8 16.8 200 66-360 51-257 (263)
258 cd07837 STKc_CdkB_plant Cataly 100.0 1.7E-28 3.6E-33 259.9 17.0 211 65-365 48-295 (295)
259 cd06623 PKc_MAPKK_plant_like C 100.0 1.2E-28 2.5E-33 255.9 15.6 210 63-367 45-262 (264)
260 cd07836 STKc_Pho85 Catalytic d 100.0 1.6E-28 3.4E-33 258.4 16.6 205 66-364 47-284 (284)
261 cd06653 STKc_MEKK3_like_1 Cata 100.0 2E-28 4.3E-33 255.3 17.1 210 63-364 50-264 (264)
262 KOG0690 Serine/threonine prote 100.0 7.8E-30 1.7E-34 257.1 6.2 221 66-385 217-449 (516)
263 KOG0574 STE20-like serine/thre 100.0 5.4E-30 1.2E-34 255.8 4.8 210 66-369 77-291 (502)
264 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 1.5E-28 3.3E-33 259.2 16.0 208 63-367 49-272 (284)
265 cd05058 PTKc_Met_Ron Catalytic 100.0 1.9E-28 4.1E-33 254.6 16.6 206 65-360 44-254 (262)
266 cd07858 STKc_TEY_MAPK_plant Ca 100.0 7.4E-29 1.6E-33 268.6 13.9 218 63-371 50-301 (337)
267 cd06610 STKc_OSR1_SPAK Catalyt 100.0 1.9E-28 4.2E-33 254.7 16.5 209 64-364 46-267 (267)
268 cd07879 STKc_p38delta_MAPK13 C 100.0 1.6E-28 3.4E-33 266.7 16.5 210 64-370 61-306 (342)
269 cd07854 STKc_MAPK4_6 Catalytic 100.0 7.5E-29 1.6E-33 269.2 13.7 216 66-370 51-309 (342)
270 cd05075 PTKc_Axl Catalytic dom 100.0 2.3E-28 5.1E-33 255.4 16.9 207 65-360 48-266 (272)
271 cd06606 STKc_MAPKKK Catalytic 100.0 2.3E-28 5E-33 251.8 16.4 211 63-364 45-260 (260)
272 KOG0608 Warts/lats-like serine 100.0 2.5E-29 5.4E-34 271.4 9.2 263 66-385 678-951 (1034)
273 cd05091 PTKc_Ror2 Catalytic do 100.0 2.2E-28 4.8E-33 257.4 16.4 203 64-360 55-278 (283)
274 cd05109 PTKc_HER2 Catalytic do 100.0 2.3E-28 5E-33 257.0 16.4 204 63-360 55-263 (279)
275 cd05055 PTKc_PDGFR Catalytic d 100.0 2.6E-28 5.5E-33 260.3 16.9 204 65-360 86-296 (302)
276 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 2.4E-28 5.3E-33 256.7 16.5 195 65-361 64-272 (274)
277 cd05040 PTKc_Ack_like Catalyti 100.0 3.2E-28 6.9E-33 252.2 17.1 205 63-360 42-253 (257)
278 cd05036 PTKc_ALK_LTK Catalytic 100.0 2E-28 4.3E-33 257.3 15.8 203 65-361 57-274 (277)
279 cd05061 PTKc_InsR Catalytic do 100.0 2.7E-28 5.9E-33 257.9 16.9 212 63-367 55-286 (288)
280 cd08225 STKc_Nek5 Catalytic do 100.0 2.6E-28 5.6E-33 252.5 16.2 206 64-364 46-257 (257)
281 cd06917 STKc_NAK1_like Catalyt 100.0 2.3E-28 5.1E-33 256.3 16.0 208 63-368 45-262 (277)
282 cd05033 PTKc_EphR Catalytic do 100.0 3.6E-28 7.9E-33 253.5 17.3 204 64-360 52-260 (266)
283 cd07834 STKc_MAPK Catalytic do 100.0 1.4E-28 3.1E-33 265.1 14.2 218 64-370 46-298 (330)
284 cd05085 PTKc_Fer Catalytic dom 100.0 4.3E-28 9.2E-33 250.2 17.1 204 63-360 38-246 (250)
285 PTZ00024 cyclin-dependent prot 100.0 3.7E-28 8E-33 262.7 17.3 225 64-370 67-322 (335)
286 cd05610 STKc_MASTL Catalytic d 100.0 2.8E-28 6.2E-33 286.4 17.8 103 63-170 50-153 (669)
287 cd07835 STKc_CDK1_like Catalyt 100.0 3.8E-28 8.2E-33 255.5 16.7 206 65-364 46-283 (283)
288 cd05122 PKc_STE Catalytic doma 100.0 4.4E-28 9.4E-33 248.7 16.7 205 63-363 43-253 (253)
289 cd08215 STKc_Nek Catalytic dom 100.0 4.2E-28 9.1E-33 250.1 16.6 206 64-364 46-258 (258)
290 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 2.8E-28 6.1E-33 252.5 15.3 197 62-360 46-256 (259)
291 PLN00009 cyclin-dependent kina 100.0 3.2E-28 6.9E-33 257.9 16.0 210 65-368 49-291 (294)
292 cd05060 PTKc_Syk_like Catalyti 100.0 4.3E-28 9.2E-33 251.6 16.5 203 64-360 43-250 (257)
293 cd05092 PTKc_TrkA Catalytic do 100.0 4.4E-28 9.5E-33 255.3 16.8 204 64-360 54-276 (280)
294 cd06647 STKc_PAK_I Catalytic d 100.0 2E-28 4.4E-33 259.8 14.4 207 65-368 64-276 (293)
295 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 4.3E-28 9.3E-33 255.4 16.5 204 65-360 54-276 (283)
296 cd05072 PTKc_Lyn Catalytic dom 100.0 4.6E-28 1E-32 251.8 16.3 202 65-360 49-256 (261)
297 cd05066 PTKc_EphR_A Catalytic 100.0 4.6E-28 1E-32 253.0 16.4 206 63-360 51-261 (267)
298 cd05118 STKc_CMGC Catalytic do 100.0 2.6E-28 5.7E-33 256.2 14.5 208 63-364 44-283 (283)
299 KOG0671 LAMMER dual specificit 100.0 2E-28 4.4E-33 253.1 13.3 224 66-368 134-413 (415)
300 cd06614 STKc_PAK Catalytic dom 100.0 4.1E-28 9E-33 256.0 16.0 208 65-367 63-276 (286)
301 cd05047 PTKc_Tie Catalytic dom 100.0 5.5E-28 1.2E-32 253.0 16.8 202 63-360 41-263 (270)
302 cd08229 STKc_Nek7 Catalytic do 100.0 4.4E-28 9.6E-33 252.6 16.0 204 63-360 48-260 (267)
303 cd05041 PTKc_Fes_like Catalyti 100.0 5.6E-28 1.2E-32 249.5 16.6 204 64-360 39-247 (251)
304 cd06641 STKc_MST3 Catalytic do 100.0 3.9E-28 8.6E-33 255.1 15.4 206 64-367 49-259 (277)
305 cd05068 PTKc_Frk_like Catalyti 100.0 6.1E-28 1.3E-32 251.0 16.7 201 66-360 50-256 (261)
306 cd07833 STKc_CDKL Catalytic do 100.0 6.9E-28 1.5E-32 253.9 17.2 208 63-364 46-288 (288)
307 cd07846 STKc_CDKL2_3 Catalytic 100.0 2.8E-28 6.1E-33 256.7 14.3 205 65-364 48-286 (286)
308 cd05051 PTKc_DDR Catalytic dom 100.0 7.2E-28 1.6E-32 255.1 17.3 203 65-360 67-292 (296)
309 cd05101 PTKc_FGFR2 Catalytic d 100.0 5.6E-28 1.2E-32 257.5 16.6 205 63-360 66-291 (304)
310 cd05105 PTKc_PDGFR_alpha Catal 100.0 4E-28 8.7E-33 268.7 15.9 204 64-360 87-392 (400)
311 cd05056 PTKc_FAK Catalytic dom 100.0 5.6E-28 1.2E-32 252.6 16.2 203 63-360 53-260 (270)
312 cd05032 PTKc_InsR_like Catalyt 100.0 7.1E-28 1.5E-32 252.5 17.0 202 66-360 58-273 (277)
313 cd05083 PTKc_Chk Catalytic dom 100.0 8.1E-28 1.8E-32 249.1 17.1 197 65-360 47-249 (254)
314 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 6.5E-28 1.4E-32 250.7 16.4 202 64-360 48-255 (260)
315 cd05063 PTKc_EphR_A2 Catalytic 100.0 7.4E-28 1.6E-32 251.3 16.7 205 64-360 53-262 (268)
316 cd07852 STKc_MAPK15 Catalytic 100.0 5.3E-28 1.2E-32 261.7 16.1 217 64-369 53-303 (337)
317 cd06618 PKc_MKK7 Catalytic dom 100.0 7E-28 1.5E-32 255.8 16.6 209 66-369 62-281 (296)
318 KOG0614 cGMP-dependent protein 100.0 1.4E-29 3E-34 268.0 3.4 224 66-386 469-703 (732)
319 cd08530 STKc_CNK2-like Catalyt 100.0 6.8E-28 1.5E-32 249.0 16.0 205 63-364 45-256 (256)
320 cd05050 PTKc_Musk Catalytic do 100.0 5.3E-28 1.2E-32 255.4 15.5 204 64-360 55-284 (288)
321 cd07838 STKc_CDK4_6_like Catal 100.0 1E-27 2.2E-32 252.2 17.6 203 71-364 55-287 (287)
322 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 1.1E-27 2.5E-32 249.1 17.5 204 63-360 48-260 (267)
323 cd05099 PTKc_FGFR4 Catalytic d 100.0 1.1E-27 2.4E-32 256.7 17.9 204 64-360 64-288 (314)
324 cd05069 PTKc_Yes Catalytic dom 100.0 8.4E-28 1.8E-32 250.0 16.4 201 65-360 49-255 (260)
325 cd05071 PTKc_Src Catalytic dom 100.0 9E-28 2E-32 250.4 16.7 202 64-360 48-255 (262)
326 cd05035 PTKc_Axl_like Catalyti 100.0 8.8E-28 1.9E-32 250.8 16.6 208 64-360 48-267 (273)
327 cd05112 PTKc_Itk Catalytic dom 100.0 8.2E-28 1.8E-32 249.0 16.1 202 65-360 47-253 (256)
328 cd07864 STKc_CDK12 Catalytic d 100.0 1.2E-27 2.7E-32 254.1 17.6 211 64-364 53-302 (302)
329 cd05098 PTKc_FGFR1 Catalytic d 100.0 7E-28 1.5E-32 257.3 15.8 205 63-360 69-294 (307)
330 cd07830 STKc_MAK_like Catalyti 100.0 1.2E-27 2.6E-32 251.5 17.4 207 63-364 43-283 (283)
331 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 8E-28 1.7E-32 259.7 16.4 210 66-373 58-300 (328)
332 cd08222 STKc_Nek11 Catalytic d 100.0 6.7E-28 1.5E-32 250.4 15.2 208 60-364 45-260 (260)
333 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 9E-28 1.9E-32 253.0 16.3 209 63-360 51-278 (284)
334 cd06627 STKc_Cdc7_like Catalyt 100.0 1E-27 2.2E-32 247.2 16.1 206 63-364 45-254 (254)
335 cd07840 STKc_CDK9_like Catalyt 100.0 9.5E-28 2.1E-32 252.2 16.2 209 64-364 45-287 (287)
336 cd05039 PTKc_Csk_like Catalyti 100.0 1.2E-27 2.6E-32 248.0 16.7 199 63-360 46-251 (256)
337 cd05103 PTKc_VEGFR2 Catalytic 100.0 1.1E-27 2.4E-32 260.3 16.9 207 64-361 57-335 (343)
338 KOG0194 Protein tyrosine kinas 100.0 4.8E-28 1E-32 265.2 13.8 200 66-360 210-415 (474)
339 PRK13184 pknD serine/threonine 100.0 5.2E-28 1.1E-32 283.9 15.0 220 63-360 48-284 (932)
340 cd05148 PTKc_Srm_Brk Catalytic 100.0 1.3E-27 2.9E-32 248.2 16.4 202 64-360 49-256 (261)
341 cd05045 PTKc_RET Catalytic dom 100.0 1.1E-27 2.5E-32 253.3 16.1 205 63-360 49-281 (290)
342 cd05042 PTKc_Aatyk Catalytic d 100.0 1.4E-27 3E-32 249.5 16.5 203 65-360 43-265 (269)
343 cd06657 STKc_PAK4 Catalytic do 100.0 1.1E-27 2.4E-32 254.2 16.1 209 63-369 63-278 (292)
344 cd05065 PTKc_EphR_B Catalytic 99.9 1.7E-27 3.6E-32 248.9 16.8 208 63-360 51-263 (269)
345 cd05097 PTKc_DDR_like Catalyti 99.9 2E-27 4.4E-32 252.1 17.3 204 64-360 64-291 (295)
346 cd05044 PTKc_c-ros Catalytic d 99.9 1.9E-27 4.1E-32 248.1 16.6 205 63-360 45-265 (269)
347 KOG1026 Nerve growth factor re 99.9 6.1E-28 1.3E-32 272.3 13.7 206 60-359 532-756 (774)
348 KOG1095 Protein tyrosine kinas 99.9 6.1E-28 1.3E-32 281.4 14.0 249 18-360 686-956 (1025)
349 KOG1027 Serine/threonine prote 99.9 9.9E-28 2.1E-32 268.0 15.1 211 63-367 548-773 (903)
350 cd05123 STKc_AGC Catalytic dom 99.9 1.8E-27 3.8E-32 245.2 15.7 204 63-364 39-250 (250)
351 cd05110 PTKc_HER4 Catalytic do 99.9 1.5E-27 3.4E-32 254.2 15.4 203 64-360 56-263 (303)
352 cd05087 PTKc_Aatyk1_Aatyk3 Cat 99.9 3.6E-27 7.9E-32 246.5 17.7 205 63-360 41-265 (269)
353 cd05067 PTKc_Lck_Blk Catalytic 99.9 2.4E-27 5.1E-32 246.5 16.2 202 64-360 48-255 (260)
354 smart00219 TyrKc Tyrosine kina 99.9 3.1E-27 6.7E-32 244.1 16.9 201 66-360 50-256 (258)
355 cd05095 PTKc_DDR2 Catalytic do 99.9 3.4E-27 7.4E-32 250.5 17.7 203 65-360 67-292 (296)
356 PF07714 Pkinase_Tyr: Protein 99.9 4E-28 8.8E-33 252.9 10.4 203 65-360 49-257 (259)
357 cd05086 PTKc_Aatyk2 Catalytic 99.9 3E-27 6.5E-32 247.3 16.9 203 65-360 43-264 (268)
358 cd05100 PTKc_FGFR3 Catalytic d 99.9 2.2E-27 4.8E-32 256.7 16.2 204 64-360 64-288 (334)
359 cd05581 STKc_PDK1 Catalytic do 99.9 9.9E-28 2.2E-32 251.2 13.1 220 66-364 50-280 (280)
360 cd05043 PTK_Ryk Pseudokinase d 99.9 3.6E-27 7.9E-32 247.8 17.1 205 63-360 54-271 (280)
361 cd05046 PTK_CCK4 Pseudokinase 99.9 2.4E-27 5.2E-32 248.4 15.7 204 63-360 54-271 (275)
362 cd05057 PTKc_EGFR_like Catalyt 99.9 4E-27 8.7E-32 247.5 17.4 204 63-360 55-263 (279)
363 cd07829 STKc_CDK_like Catalyti 99.9 3.4E-27 7.4E-32 247.6 16.3 206 65-364 46-282 (282)
364 cd05613 STKc_MSK1_N N-terminal 99.9 3.1E-27 6.6E-32 249.9 15.6 210 64-368 51-275 (290)
365 KOG0696 Serine/threonine prote 99.9 4.9E-28 1.1E-32 250.5 9.1 218 69-384 401-630 (683)
366 cd05034 PTKc_Src_like Catalyti 99.9 4E-27 8.7E-32 244.6 16.0 203 64-360 48-256 (261)
367 cd05073 PTKc_Hck Catalytic dom 99.9 7.6E-27 1.6E-31 242.8 17.0 201 65-360 49-255 (260)
368 KOG1006 Mitogen-activated prot 99.9 2.6E-28 5.7E-33 240.7 5.1 229 43-367 90-333 (361)
369 cd05107 PTKc_PDGFR_beta Cataly 99.9 7.6E-27 1.6E-31 258.5 16.2 205 64-360 87-394 (401)
370 cd05038 PTKc_Jak_rpt2 Catalyti 99.9 1.3E-26 2.8E-31 243.4 17.1 208 64-360 53-278 (284)
371 cd05583 STKc_MSK_N N-terminal 99.9 9.2E-27 2E-31 246.0 15.4 211 63-368 50-273 (288)
372 PLN03225 Serine/threonine-prot 99.9 7.7E-27 1.7E-31 268.2 15.9 188 93-369 207-458 (566)
373 PHA02882 putative serine/threo 99.9 1.1E-26 2.4E-31 246.8 15.0 206 68-360 74-291 (294)
374 cd05074 PTKc_Tyro3 Catalytic d 99.9 2.3E-26 4.9E-31 240.5 16.6 208 64-360 48-267 (273)
375 KOG0193 Serine/threonine prote 99.9 1.6E-27 3.5E-32 258.4 7.9 201 66-360 437-648 (678)
376 cd08528 STKc_Nek10 Catalytic d 99.9 2.3E-26 5E-31 240.1 15.9 201 64-360 55-265 (269)
377 KOG0695 Serine/threonine prote 99.9 2.5E-27 5.4E-32 239.6 7.2 217 73-386 307-542 (593)
378 KOG0668 Casein kinase II, alph 99.9 5.4E-27 1.2E-31 226.8 8.4 208 64-368 79-329 (338)
379 smart00220 S_TKc Serine/Threon 99.9 4.9E-26 1.1E-30 231.6 15.2 205 64-364 34-244 (244)
380 KOG0587 Traf2- and Nck-interac 99.9 1.4E-25 3.1E-30 251.9 16.8 212 64-367 62-288 (953)
381 KOG4250 TANK binding protein k 99.9 4.1E-26 8.8E-31 252.0 11.6 205 14-312 6-228 (732)
382 KOG4257 Focal adhesion tyrosin 99.9 4.6E-26 1E-30 246.1 9.6 203 63-360 437-644 (974)
383 KOG4278 Protein tyrosine kinas 99.9 1.1E-25 2.3E-30 242.6 11.7 201 66-360 312-518 (1157)
384 KOG1290 Serine/threonine prote 99.9 6.1E-25 1.3E-29 232.8 15.5 92 66-157 123-224 (590)
385 KOG1151 Tousled-like protein k 99.9 3.1E-25 6.7E-30 231.4 12.6 214 66-367 516-747 (775)
386 KOG0664 Nemo-like MAPK-related 99.9 2.6E-26 5.6E-31 226.9 3.9 214 63-368 98-350 (449)
387 KOG0196 Tyrosine kinase, EPH ( 99.9 1.6E-25 3.5E-30 247.9 10.5 204 63-360 676-886 (996)
388 KOG0670 U4/U6-associated splic 99.9 1.9E-25 4.1E-30 237.4 9.3 204 66-366 477-751 (752)
389 KOG1094 Discoidin domain recep 99.9 1E-25 2.2E-30 242.4 7.1 205 62-359 580-798 (807)
390 smart00750 KIND kinase non-cat 99.9 4.5E-25 9.7E-30 215.7 9.2 159 105-366 1-170 (176)
391 PLN03224 probable serine/threo 99.9 3.6E-24 7.7E-29 240.8 16.7 212 66-366 221-505 (507)
392 KOG2052 Activin A type IB rece 99.9 7.2E-25 1.6E-29 230.3 9.7 206 66-359 254-497 (513)
393 KOG0199 ACK and related non-re 99.9 1.1E-24 2.3E-29 238.3 9.8 207 65-364 159-371 (1039)
394 KOG1152 Signal transduction se 99.9 7.2E-25 1.6E-29 235.8 8.0 147 66-309 615-770 (772)
395 PLN00113 leucine-rich repeat r 99.9 4.5E-24 9.8E-29 262.6 12.8 192 66-360 732-946 (968)
396 KOG3653 Transforming growth fa 99.9 2.7E-24 5.9E-29 227.5 8.5 233 31-358 222-496 (534)
397 KOG1167 Serine/threonine prote 99.9 1.5E-23 3.3E-28 219.9 11.6 249 63-367 80-387 (418)
398 KOG0576 Mitogen-activated prot 99.9 1.7E-23 3.7E-28 228.7 11.8 207 66-367 61-277 (829)
399 KOG0984 Mitogen-activated prot 99.9 2.9E-23 6.2E-28 198.5 9.5 167 63-324 90-268 (282)
400 KOG0200 Fibroblast/platelet-de 99.9 1.5E-22 3.2E-27 235.0 15.1 202 66-360 350-574 (609)
401 KOG1033 eIF-2alpha kinase PEK/ 99.9 1.8E-23 3.9E-28 225.5 6.5 183 95-364 330-515 (516)
402 KOG1025 Epidermal growth facto 99.9 1.5E-22 3.3E-27 225.0 9.8 239 28-360 705-952 (1177)
403 cd00180 PKc Catalytic domain o 99.9 1.3E-21 2.8E-26 193.7 14.0 176 63-362 37-215 (215)
404 KOG1024 Receptor-like protein 99.8 4.8E-21 1E-25 198.2 13.0 205 63-360 333-550 (563)
405 KOG0590 Checkpoint kinase and 99.8 3.8E-21 8.3E-26 220.8 8.7 213 64-368 368-592 (601)
406 KOG1345 Serine/threonine kinas 99.8 2.8E-20 6.1E-25 184.6 8.8 180 75-352 79-275 (378)
407 KOG4158 BRPK/PTEN-induced prot 99.8 2.4E-19 5.2E-24 186.1 11.7 229 42-360 243-512 (598)
408 smart00221 STYKc Protein kinas 99.8 6.5E-19 1.4E-23 177.6 12.7 170 63-325 43-218 (225)
409 COG0515 SPS1 Serine/threonine 99.7 6.3E-17 1.4E-21 169.9 14.9 219 61-367 41-281 (384)
410 KOG0603 Ribosomal protein S6 k 99.7 2.6E-18 5.6E-23 189.2 2.7 215 63-384 42-267 (612)
411 KOG1240 Protein kinase contain 99.7 9.1E-18 2E-22 192.8 3.0 202 71-361 75-291 (1431)
412 KOG0606 Microtubule-associated 99.6 1.3E-16 2.9E-21 183.5 5.6 164 131-369 153-323 (1205)
413 KOG0271 Notchless-like WD40 re 99.6 9E-16 1.9E-20 157.9 10.6 122 581-715 136-269 (480)
414 KOG0272 U4/U6 small nuclear ri 99.6 2.8E-15 6.1E-20 156.2 10.6 125 580-717 323-455 (459)
415 KOG0275 Conserved WD40 repeat- 99.6 5.8E-16 1.3E-20 155.9 5.1 112 605-718 211-332 (508)
416 KOG0271 Notchless-like WD40 re 99.6 2.6E-15 5.7E-20 154.5 9.8 119 586-713 93-226 (480)
417 PRK09188 serine/threonine prot 99.6 3.5E-15 7.6E-20 161.6 9.3 93 63-171 67-162 (365)
418 KOG0272 U4/U6 small nuclear ri 99.6 3.1E-15 6.7E-20 155.9 6.4 124 578-714 237-367 (459)
419 KOG1164 Casein kinase (serine/ 99.6 5.4E-14 1.2E-18 151.6 16.4 212 64-360 63-292 (322)
420 KOG0279 G protein beta subunit 99.6 1.6E-14 3.6E-19 143.6 11.1 112 601-718 99-218 (315)
421 KOG0195 Integrin-linked kinase 99.5 9.2E-15 2E-19 145.4 8.1 195 66-359 236-440 (448)
422 KOG0273 Beta-transducin family 99.5 2.6E-14 5.7E-19 150.7 11.9 109 600-716 352-476 (524)
423 PRK10359 lipopolysaccharide co 99.5 6.2E-15 1.3E-19 149.1 6.5 96 64-169 82-182 (232)
424 PTZ00421 coronin; Provisional 99.5 8.5E-14 1.8E-18 157.1 16.1 114 603-717 71-193 (493)
425 KOG0266 WD40 repeat-containing 99.5 6.3E-14 1.4E-18 158.0 14.7 108 602-716 198-312 (456)
426 PRK10345 hypothetical protein; 99.5 2.9E-14 6.4E-19 143.4 10.6 99 65-168 44-156 (210)
427 KOG1023 Natriuretic peptide re 99.5 2.6E-13 5.6E-18 150.0 16.7 198 71-360 1-219 (484)
428 KOG0263 Transcription initiati 99.5 5.8E-14 1.3E-18 156.6 11.4 119 587-714 512-641 (707)
429 PTZ00420 coronin; Provisional 99.5 3.7E-13 8E-18 153.1 16.3 126 585-715 57-190 (568)
430 KOG0318 WD40 repeat stress pro 99.5 4.1E-13 8.9E-18 143.5 14.1 90 591-694 179-272 (603)
431 KOG0266 WD40 repeat-containing 99.5 4.1E-13 8.9E-18 151.4 14.5 127 582-717 217-360 (456)
432 KOG0590 Checkpoint kinase and 99.5 2.6E-14 5.7E-19 164.6 4.0 217 58-366 61-291 (601)
433 KOG0263 Transcription initiati 99.5 2E-13 4.4E-18 152.4 10.8 127 581-716 464-601 (707)
434 KOG1165 Casein kinase (serine/ 99.5 3E-13 6.4E-18 138.5 11.1 195 28-311 32-239 (449)
435 PF14531 Kinase-like: Kinase-l 99.5 1.5E-14 3.3E-19 150.6 1.7 157 96-352 114-288 (288)
436 KOG0283 WD40 repeat-containing 99.5 2E-13 4.2E-18 153.6 10.6 112 601-714 260-432 (712)
437 cd05147 RIO1_euk RIO kinase fa 99.4 1.4E-13 3E-18 136.8 7.4 101 66-174 68-170 (190)
438 KOG0279 G protein beta subunit 99.4 8.2E-13 1.8E-17 131.7 12.3 106 603-717 59-175 (315)
439 KOG0284 Polyadenylation factor 99.4 2.6E-13 5.6E-18 141.1 8.2 127 577-717 155-289 (464)
440 KOG0316 Conserved WD40 repeat- 99.4 1.3E-12 2.8E-17 127.3 10.9 105 603-716 13-125 (307)
441 cd05145 RIO1_like RIO kinase f 99.4 4.8E-13 1E-17 133.0 8.2 100 65-173 67-169 (190)
442 KOG0291 WD40-repeat-containing 99.4 1.6E-12 3.6E-17 143.8 12.5 85 602-694 345-429 (893)
443 PRK12274 serine/threonine prot 99.4 9E-13 2E-17 130.9 9.5 92 63-170 47-141 (218)
444 KOG0276 Vesicle coat complex C 99.4 6.5E-13 1.4E-17 144.2 8.6 127 576-714 113-249 (794)
445 KOG1163 Casein kinase (serine/ 99.4 1.2E-12 2.7E-17 128.6 9.6 135 95-312 85-225 (341)
446 KOG0295 WD40 repeat-containing 99.4 3E-12 6.6E-17 131.6 12.4 119 589-715 256-399 (406)
447 KOG0313 Microtubule binding pr 99.4 2.1E-12 4.6E-17 133.4 9.9 128 579-718 278-414 (423)
448 KOG0285 Pleiotropic regulator 99.4 2.6E-12 5.7E-17 131.6 10.3 108 601-717 145-260 (460)
449 KOG0282 mRNA splicing factor [ 99.3 8.4E-13 1.8E-17 140.0 5.8 107 601-714 208-322 (503)
450 KOG0265 U5 snRNP-specific prot 99.3 9.6E-12 2.1E-16 125.2 12.3 87 601-694 41-127 (338)
451 PTZ00420 coronin; Provisional 99.3 2.3E-11 4.9E-16 138.5 15.1 103 603-714 121-236 (568)
452 KOG0319 WD40-repeat-containing 99.3 1.5E-11 3.2E-16 136.4 12.4 125 579-717 482-614 (775)
453 KOG0645 WD40 repeat protein [G 99.3 3.6E-11 7.8E-16 119.6 13.7 116 590-715 93-218 (312)
454 KOG0285 Pleiotropic regulator 99.3 1.1E-11 2.5E-16 127.0 10.5 128 576-717 209-344 (460)
455 KOG0647 mRNA export protein (c 99.3 2.2E-11 4.8E-16 122.7 10.9 103 607-715 27-138 (347)
456 PTZ00421 coronin; Provisional 99.3 4.4E-11 9.5E-16 135.2 14.7 102 602-712 120-231 (493)
457 PRK01723 3-deoxy-D-manno-octul 99.3 1.2E-11 2.5E-16 127.6 8.9 102 63-170 86-191 (239)
458 KOG0286 G-protein beta subunit 99.3 3.9E-11 8.4E-16 120.5 11.7 119 578-710 162-291 (343)
459 KOG0601 Cyclin-dependent kinas 99.2 1.1E-11 2.4E-16 137.3 8.4 218 60-367 160-385 (524)
460 KOG0303 Actin-binding protein 99.2 1.9E-11 4E-16 127.0 9.2 112 602-714 76-195 (472)
461 KOG0286 G-protein beta subunit 99.2 7E-11 1.5E-15 118.6 12.4 108 601-717 139-254 (343)
462 KOG0283 WD40 repeat-containing 99.2 2.3E-11 5.1E-16 137.1 10.0 104 602-714 364-473 (712)
463 KOG0275 Conserved WD40 repeat- 99.2 3E-12 6.4E-17 129.4 2.2 125 581-714 234-370 (508)
464 KOG1166 Mitotic checkpoint ser 99.2 1.5E-11 3.3E-16 144.9 7.5 123 96-307 769-899 (974)
465 KOG0302 Ribosome Assembly prot 99.2 5.6E-11 1.2E-15 122.9 10.6 108 601-714 251-371 (440)
466 KOG1407 WD40 repeat protein [F 99.2 3.2E-11 6.9E-16 119.4 8.4 109 601-714 14-128 (313)
467 KOG1266 Protein kinase [Signal 99.2 7.5E-12 1.6E-16 128.2 4.1 207 71-368 121-338 (458)
468 KOG0316 Conserved WD40 repeat- 99.2 7E-11 1.5E-15 115.3 10.6 125 580-718 79-209 (307)
469 KOG0293 WD40 repeat-containing 99.2 4.6E-11 1E-15 124.6 9.5 105 603-714 220-334 (519)
470 KOG0313 Microtubule binding pr 99.2 1E-10 2.3E-15 121.0 11.9 112 605-718 191-326 (423)
471 KOG0295 WD40 repeat-containing 99.2 8.8E-11 1.9E-15 121.0 11.3 128 576-715 209-357 (406)
472 KOG0606 Microtubule-associated 99.2 5.2E-11 1.1E-15 138.0 10.2 232 70-367 857-1098(1205)
473 PRK14879 serine/threonine prot 99.2 4.5E-11 9.8E-16 120.4 8.6 98 63-170 45-143 (211)
474 KOG0645 WD40 repeat protein [G 99.2 2.5E-10 5.3E-15 113.7 12.9 108 602-715 9-128 (312)
475 KOG0277 Peroxisomal targeting 99.2 1.2E-10 2.5E-15 115.0 10.4 118 590-714 127-257 (311)
476 KOG0319 WD40-repeat-containing 99.2 1.1E-10 2.3E-15 129.7 11.2 100 605-713 461-568 (775)
477 KOG0277 Peroxisomal targeting 99.2 2.6E-11 5.7E-16 119.5 5.7 109 603-718 186-305 (311)
478 KOG0292 Vesicle coat complex C 99.2 5E-11 1.1E-15 134.0 8.5 128 576-716 25-159 (1202)
479 KOG0310 Conserved WD40 repeat- 99.2 1.7E-10 3.8E-15 122.9 11.9 121 580-714 131-260 (487)
480 KOG0264 Nucleosome remodeling 99.2 1.2E-10 2.7E-15 123.1 10.7 100 583-688 243-348 (422)
481 KOG0273 Beta-transducin family 99.2 1.4E-10 2.9E-15 123.0 10.8 104 601-705 270-414 (524)
482 smart00090 RIO RIO-like kinase 99.2 4.5E-11 9.7E-16 123.0 7.0 103 64-174 97-201 (237)
483 KOG0284 Polyadenylation factor 99.1 6.4E-11 1.4E-15 123.5 7.5 104 581-692 193-299 (464)
484 KOG0310 Conserved WD40 repeat- 99.1 2.6E-10 5.6E-15 121.6 12.3 106 603-716 106-220 (487)
485 PRK09605 bifunctional UGMP fam 99.1 7.5E-11 1.6E-15 135.9 9.0 94 63-170 382-476 (535)
486 PLN00181 protein SPA1-RELATED; 99.1 4.8E-10 1E-14 135.4 15.3 105 603-716 571-684 (793)
487 KOG0315 G-protein beta subunit 99.1 3.5E-10 7.5E-15 111.4 11.1 85 603-694 211-295 (311)
488 KOG0291 WD40-repeat-containing 99.1 2.5E-10 5.5E-15 126.8 11.3 130 583-713 365-541 (893)
489 TIGR03724 arch_bud32 Kae1-asso 99.1 1.2E-10 2.6E-15 116.2 7.6 95 63-170 43-138 (199)
490 KOG0315 G-protein beta subunit 99.1 3.9E-10 8.4E-15 111.1 10.5 98 602-708 78-183 (311)
491 KOG0278 Serine/threonine kinas 99.1 9.2E-11 2E-15 115.3 5.9 95 605-707 98-199 (334)
492 KOG0973 Histone transcription 99.1 3.5E-10 7.5E-15 130.8 11.3 111 604-715 66-194 (942)
493 KOG1407 WD40 repeat protein [F 99.1 4.6E-10 1E-14 111.3 10.2 112 584-710 171-290 (313)
494 KOG0640 mRNA cleavage stimulat 99.1 3E-10 6.5E-15 114.7 9.1 111 602-718 167-287 (430)
495 KOG0264 Nucleosome remodeling 99.1 3.2E-10 7E-15 120.0 9.4 107 601-713 221-338 (422)
496 KOG0772 Uncharacterized conser 99.1 1.9E-10 4.1E-15 123.0 7.6 109 602-710 162-335 (641)
497 KOG1273 WD40 repeat protein [G 99.1 4.5E-10 9.7E-15 113.8 9.4 84 610-702 26-116 (405)
498 KOG0305 Anaphase promoting com 99.1 5.9E-10 1.3E-14 122.8 10.7 94 603-704 297-399 (484)
499 KOG0643 Translation initiation 99.1 1.4E-09 3E-14 108.2 12.1 134 581-715 23-213 (327)
500 KOG0276 Vesicle coat complex C 99.0 1.1E-09 2.4E-14 119.5 12.1 118 584-713 79-206 (794)
No 1
>PLN00181 protein SPA1-RELATED; Provisional
Probab=100.00 E-value=3.5e-70 Score=654.47 Aligned_cols=580 Identities=60% Similarity=0.930 Sum_probs=434.3
Q ss_pred cCCCcccccccccCCccc-ccccccCCCCCCcccccccccCCCCccchhhchhhhhhcccCCC-CCceeccccee----e
Q 004989 15 MEGSSDSAWQDSDSSRAL-NISGVSDRNPRLLRGERFGVRGDDSNDFELRKHSDGVELTHGDH-LRNQGGLSGVC----E 88 (720)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~r~~~e~~~L~~l~H-pnIV~l~~~~~----~ 88 (720)
|||++++ ++|++ |+++++.++++. .+.+.| +||+++++ .+ .
T Consensus 1 ~~~~~~~------~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~-~~~~~~~ 47 (793)
T PLN00181 1 MKGSSES------NSRGLNNTSGVSEFCTDG--------------------------SKSLSHIDYVRSLLG-SHKEGNL 47 (793)
T ss_pred CCCcccC------CCcCccCcccccccCCCc--------------------------cchhhHHHHHHHhhc-ccCCccc
Confidence 7888875 78999 899998888777 234556 68888888 34 2
Q ss_pred cCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcc
Q 004989 89 NEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASC 168 (720)
Q Consensus 89 ~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a 168 (720)
+......++.+|||.+++|.+||......+++.+++.|++||+.||+|||++|||||||||+||||+..|.+|++|||.+
T Consensus 48 ~~~~~~~~~~~~e~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP~NiLl~~~~~~k~~d~~~~ 127 (793)
T PLN00181 48 DGLDDDSIVRALECEDVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASC 127 (793)
T ss_pred cccccchhhhhhccCCccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCchhEEEcccCcEEEeecccc
Confidence 22233357888999888999999766667999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCCCcccccccccccccccccc
Q 004989 169 SDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKIL 248 (720)
Q Consensus 169 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~ 248 (720)
.+.+.+. ...++++|||+++......... .
T Consensus 128 ~~~~~~~--------------------------~~~~ki~DfG~a~~~~~~~~~~-----------------------~- 157 (793)
T PLN00181 128 SDSGSDE--------------------------DATTKSREIGSSRREEILSERR-----------------------I- 157 (793)
T ss_pred Ccccccc--------------------------cCcccccccccccccccccccc-----------------------h-
Confidence 7654321 1135679999987432110000 0
Q ss_pred ccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhccccCCCCchHHHHHHHhhcCCCCc
Q 004989 249 DNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRVLPP 328 (720)
Q Consensus 249 d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLltpf~~~~~~~~~~~~l~~~~~p~ 328 (720)
..........++......+||++|||||++.+..|+.++|||||||+||||++|+.+.......+..+....+|+
T Consensus 158 -----~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~~~~~~~~~~~~~ 232 (793)
T PLN00181 158 -----EKLEEVKKQPFPMKQILAMEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSRTMSSLRHRVLPP 232 (793)
T ss_pred -----hhhhccccCCCcccccccCCCcceEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHHHHHHHHHhhcCh
Confidence 000011122233333446899999999999999999999999999999999998877665555566666666676
Q ss_pred cccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCccchHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 004989 329 QLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEEREAAIELREQIDEEELLLEFLLLVQQRKQESAKKL 408 (720)
Q Consensus 329 ~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~l~e~~~~~~~~e~~~~~e~L~~fL~~l~~qK~e~~~~l 408 (720)
.....++...+++.+||+++|.+||++.|+|+||||......+.+++......+..++.+.+.+|+...+++++++..++
T Consensus 233 ~~~~~~~~~~~~~~~~L~~~P~~Rps~~eil~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 312 (793)
T PLN00181 233 QILLNWPKEASFCLWLLHPEPSCRPSMSELLQSEFINEPRENLEEREAAMELRDRIEEQELLLEFLFLIQQRKQEAADKL 312 (793)
T ss_pred hhhhcCHHHHHHHHHhCCCChhhCcChHHHhhchhhhhhhHHhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 66667788889999999999999999999999999998766555555555555555666777888888889999999999
Q ss_pred HHHHHhhhcchHHHHHHHHHHHhcCCCCcccccccccCCCCCCCCccccCCCCCcccCcccccccccccccccccccccc
Q 004989 409 QDIVSFICSDIEEVSKQQAILRKKGGLGSFAELANDDLSGLNIPSLNIIDNDCSATMGSRKRFRPELQLHHLEECDDNLD 488 (720)
Q Consensus 409 q~el~~Le~Di~evE~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 488 (720)
+.+++.|+.||+++++|+......+... ......++++..+......+.....
T Consensus 313 ~~~~~~l~~~i~~~~~r~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~~~~~~~~~~-- 365 (793)
T PLN00181 313 QDTISLLSSDIDQVVKRQLVLQQKGSDV-------------------------RSFLASRKRIRQGAETLAAEEENDD-- 365 (793)
T ss_pred HHHHHHHHHHHHHHHhhhhhhccccccc-------------------------ccccccchhhhccccchhhcccccc--
Confidence 9999999999999998775543322111 1112223333333322211111110
Q ss_pred ccccCCCCCCccchhhhhhHHHHhHhHHHHHHHhhccCCCCC---CCCCccccccCCC-CCCCCCcccccccccccCCCc
Q 004989 489 DNQKHNLTGNEERSLFKSSRLMKNFKKLESAYFLTRCRPVKP---SGRPLVRHSQLSS-DGRTSKPLVNERSSINNLGSK 564 (720)
Q Consensus 489 ~~~~~~~~~~~~~~~~~~~r~~~~~~~l~~~y~~~r~~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 564 (720)
..+....+..+.+++++|||.||++||+|||++|++.... ..++..+.++... +++++ +.++.++.+..
T Consensus 366 --~~~~~~~~~~s~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 438 (793)
T PLN00181 366 --NSSKLDDTLESTLLESSRLMRNLKKLESVYFATRYRQIKAAAAAEKPLARYYSALSENGRSS-----EKSSMSNPAKP 438 (793)
T ss_pred --ccccccccccccchhhhHHHHHHHHHHHHHhhhhhccccccccccccccccccccccccccc-----ccccccccccc
Confidence 0001223446677889999999999999999999865332 3444444444443 33332 33444444333
Q ss_pred cC-c-cCCCCCccccchhhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCccccc
Q 004989 565 EG-Y-SEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINE 642 (720)
Q Consensus 565 ~~-~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~ 642 (720)
+. | ....+++|+++|+++|+++++++++++.+.++.|++.+|.+.|++|+|+|||++|||||.|++|+|||+......
T Consensus 439 ~~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~~ 518 (793)
T PLN00181 439 PDFYINDSRQGGWIDPFLEGLCKYLSFSKLRVKADLKQGDLLNSSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKD 518 (793)
T ss_pred ccccccccccccchhhhhhhhhhhhcccceEEEEeeccccccCCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCccccc
Confidence 22 2 122366789999999999999999999999999999999999999999999999999999999999998765444
Q ss_pred ccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecC-CceEEEecCccc
Q 004989 643 NRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNK-LLIIFRYGMFQE 714 (720)
Q Consensus 643 ~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~-------v~~v~~~~-~~~~~~~~~~~~ 714 (720)
..+.|+|+..+.++++|.+++|+|+++++|||+++||+|+|||+.+++.+.+ |++++|++ .+..+++|+.|.
T Consensus 519 ~~~~~~~~~~~~~~~~v~~l~~~~~~~~~las~~~Dg~v~lWd~~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg 598 (793)
T PLN00181 519 GRDIHYPVVELASRSKLSGICWNSYIKSQVASSNFEGVVQVWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDG 598 (793)
T ss_pred ccccccceEEecccCceeeEEeccCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCC
Confidence 4567788888888889999999998888999999999999999999988775 89999996 678999999986
Q ss_pred eE
Q 004989 715 VK 716 (720)
Q Consensus 715 ~~ 716 (720)
..
T Consensus 599 ~v 600 (793)
T PLN00181 599 SV 600 (793)
T ss_pred EE
Confidence 43
No 2
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.7e-43 Score=365.30 Aligned_cols=250 Identities=17% Similarity=0.172 Sum_probs=184.4
Q ss_pred cccccCCcccccccccC------CCCCC-cccccccccCCCC----ccchhhchhhhhhcccCCCCCceecccceeecCC
Q 004989 23 WQDSDSSRALNISGVSD------RNPRL-LRGERFGVRGDDS----NDFELRKHSDGVELTHGDHLRNQGGLSGVCENEA 91 (720)
Q Consensus 23 ~~~~~~~~~~~~~~~~~------~~~~~-~~~~r~~~~~~~~----~~~~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~ 91 (720)
....-.++.+|.++++. ++.+. ++++-+.-+.... ....++-.+|..+|.+|+|||||++++ +|+...
T Consensus 171 ~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d-~f~~~d 249 (475)
T KOG0615|consen 171 NDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKD-FFEVPD 249 (475)
T ss_pred cceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEee-eeecCC
Confidence 34444566777776654 33443 3333332222222 223334468889999999999999999 777665
Q ss_pred CCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccC---CceEEeecCc
Q 004989 92 AIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSF---NHVSFIESAS 167 (720)
Q Consensus 92 ~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~---~~vkliDfg~ 167 (720)
..|+|||| .||+|.+++-.++. +.+...+.+++||+.||.|||++||+||||||+|||+..+ ..+||.|||+
T Consensus 250 ---s~YmVlE~v~GGeLfd~vv~nk~-l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGl 325 (475)
T KOG0615|consen 250 ---SSYMVLEYVEGGELFDKVVANKY-LREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGL 325 (475)
T ss_pred ---ceEEEEEEecCccHHHHHHhccc-cccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccch
Confidence 45999999 99999999955544 8999999999999999999999999999999999999865 6678877776
Q ss_pred ccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccc
Q 004989 168 CSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKI 247 (720)
Q Consensus 168 a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~ 247 (720)
|+..|.. .|
T Consensus 326 AK~~g~~----------------------------------sf------------------------------------- 334 (475)
T KOG0615|consen 326 AKVSGEG----------------------------------SF------------------------------------- 334 (475)
T ss_pred hhccccc----------------------------------ee-------------------------------------
Confidence 6544321 00
Q ss_pred cccccchhhhhcccCCCCccccccccCCcccCcccccCCC---CCccccchhhhchhhhccccCCCC---chHHHHHHHh
Q 004989 248 LDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP---VSCASDIYRLGVLLFELFCPFSTG---EEKTRTMSSL 321 (720)
Q Consensus 248 ~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~---~s~~sDIwSLGvll~eLltpf~~~---~~~~~~~~~l 321 (720)
-...+|||.|.|||++.+.. +..++|||||||+||-+|++|.|+ .....+...+
T Consensus 335 --------------------m~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI 394 (475)
T KOG0615|consen 335 --------------------MKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQI 394 (475)
T ss_pred --------------------hhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHH
Confidence 01268999999999998776 344889999999999999955444 3333345555
Q ss_pred hcCCCC--ccccccCchH-HHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004989 322 RHRVLP--PQLLLKFPKE-ASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 322 ~~~~~p--~~~~~~~p~~-~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
..+.++ |..+...+++ .+||.+||..||++|||+.|+|+||||+...
T Consensus 395 ~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~~~~ 444 (475)
T KOG0615|consen 395 LKGRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALNHPWFKDAP 444 (475)
T ss_pred hcCcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhhccc
Confidence 554432 3334444444 4999999999999999999999999999764
No 3
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-39 Score=336.61 Aligned_cols=208 Identities=22% Similarity=0.271 Sum_probs=174.2
Q ss_pred hhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCce
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-QGIV 143 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs-~gIv 143 (720)
+|..+|...+||+||++|++|+.... .++++||| +||+|.++++..++ ++|...-.|+.+|+.||.|||. ++||
T Consensus 126 rEl~il~~~~spyIV~~ygaF~~~~~---~isI~mEYMDgGSLd~~~k~~g~-i~E~~L~~ia~~VL~GL~YLh~~~~II 201 (364)
T KOG0581|consen 126 RELEILRSCQSPYIVGFYGAFYSNGE---EISICMEYMDGGSLDDILKRVGR-IPEPVLGKIARAVLRGLSYLHEERKII 201 (364)
T ss_pred HHHHHHhhCCCCCeeeEeEEEEeCCc---eEEeehhhcCCCCHHHHHhhcCC-CCHHHHHHHHHHHHHHHHHHhhccCee
Confidence 99999999999999999996665553 47999999 99999999965544 9999999999999999999995 9999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++..|.|||||||.+...... +
T Consensus 202 HRDIKPsNlLvNskGeVKicDFGVS~~lvnS-------------------------------------~----------- 233 (364)
T KOG0581|consen 202 HRDIKPSNLLVNSKGEVKICDFGVSGILVNS-------------------------------------I----------- 233 (364)
T ss_pred eccCCHHHeeeccCCCEEeccccccHHhhhh-------------------------------------h-----------
Confidence 9999999999999999999999987332000 0
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
....+||..|||||.+.+..|+.++||||||+.++|
T Consensus 234 --------------------------------------------a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE 269 (364)
T KOG0581|consen 234 --------------------------------------------ANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLE 269 (364)
T ss_pred --------------------------------------------cccccccccccChhhhcCCcCCcccceecccHHHHH
Confidence 012589999999999999999999999999999999
Q ss_pred ccc---cCCCC----chHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004989 304 LFC---PFSTG----EEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 304 Llt---pf~~~----~~~~~~~~~l~~~~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
|++ ||.+. ..+...+..|.....|......++ +..+|+..||++||.+||++.|+|+|||+++...
T Consensus 270 ~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hpfi~~~~~ 343 (364)
T KOG0581|consen 270 LAIGRFPYPPPNPPYLDIFELLCAIVDEPPPRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQHPFIKKFED 343 (364)
T ss_pred HhhCCCCCCCcCCCCCCHHHHHHHHhcCCCCCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhcCHHHhhccc
Confidence 999 66653 456677777776544443333354 4569999999999999999999999999998643
No 4
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.1e-38 Score=344.39 Aligned_cols=240 Identities=20% Similarity=0.235 Sum_probs=185.6
Q ss_pred CcccccccccC------CCCCCccccccccc-CCCCccchhhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEe
Q 004989 29 SRALNISGVSD------RNPRLLRGERFGVR-GDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIE 101 (720)
Q Consensus 29 ~~~~~~~~~~~------~~~~~~~~~r~~~~-~~~~~~~~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E 101 (720)
++-+|.+++.. .+.+..-+.+++-. --.....+-+-.+|+.|.++|+|||||++|+ +|++.. .+|+|+|
T Consensus 23 g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~-~FEDs~---nVYivLE 98 (592)
T KOG0575|consen 23 GRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYH-FFEDSN---NVYIVLE 98 (592)
T ss_pred eeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeee-EeecCC---ceEEEEE
Confidence 56667777665 13444333333332 1112223334447888999999999999999 888886 5799999
Q ss_pred c-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCccccc
Q 004989 102 W-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGL 180 (720)
Q Consensus 102 ~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~ 180 (720)
+ ..++|.++++ ...+++|.+++.+++||+.||.|||+++|||||||..||||+++.+|||.|||+|.....+
T Consensus 99 LC~~~sL~el~K-rrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~------ 171 (592)
T KOG0575|consen 99 LCHRGSLMELLK-RRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYD------ 171 (592)
T ss_pred ecCCccHHHHHH-hcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcCcEEecccceeeeecCc------
Confidence 9 8999999886 4456999999999999999999999999999999999999999999999888877432111
Q ss_pred ccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcc
Q 004989 181 NTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEK 260 (720)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~ 260 (720)
+++
T Consensus 172 -----------------------------------------------------------------------------~Er 174 (592)
T KOG0575|consen 172 -----------------------------------------------------------------------------GER 174 (592)
T ss_pred -----------------------------------------------------------------------------ccc
Confidence 011
Q ss_pred cCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhccc---cCCCCchHHHHHHHhhcCC--CCccccccCc
Q 004989 261 KQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRV--LPPQLLLKFP 335 (720)
Q Consensus 261 ~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~--~p~~~~~~~p 335 (720)
..+.+|||.|+|||++....+++.+||||+||+||.||+ ||.... ...++..|.... .|. ...+
T Consensus 175 -------k~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~-vkety~~Ik~~~Y~~P~---~ls~ 243 (592)
T KOG0575|consen 175 -------KKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKT-VKETYNKIKLNEYSMPS---HLSA 243 (592)
T ss_pred -------cceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccch-HHHHHHHHHhcCccccc---ccCH
Confidence 122689999999999999999999999999999999999 555533 335666666433 333 3345
Q ss_pred hHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 336 KEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 336 ~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
..++||.+||.+||.+|||+++||.|+||...
T Consensus 244 ~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff~~g 275 (592)
T KOG0575|consen 244 EAKDLIRKLLRPNPSERPSLDEVLDHPFFKSG 275 (592)
T ss_pred HHHHHHHHHhcCCcccCCCHHHHhcCHhhhCC
Confidence 55699999999999999999999999999554
No 5
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=1.2e-38 Score=318.84 Aligned_cols=216 Identities=18% Similarity=0.261 Sum_probs=168.2
Q ss_pred Cccchhhch--hhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHH
Q 004989 57 SNDFELRKH--SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIV 134 (720)
Q Consensus 57 ~~~~~~r~~--~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL 134 (720)
..+...++. ||+.+|.+++|||+|.+++ +|.... .+++|+||...++.+-|......++...++.|++|++.|+
T Consensus 39 edd~~VkKIAlREIrmLKqLkH~NLVnLiE-VFrrkr---klhLVFE~~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai 114 (396)
T KOG0593|consen 39 EDDPVVKKIALREIRMLKQLKHENLVNLIE-VFRRKR---KLHLVFEYCDHTVLHELERYPNGVPSELVKKYLYQLLKAI 114 (396)
T ss_pred CccHHHHHHHHHHHHHHHhcccchHHHHHH-HHHhcc---eeEEEeeecchHHHHHHHhccCCCCHHHHHHHHHHHHHHh
Confidence 344566665 8999999999999999999 444433 5799999988888888877777799999999999999999
Q ss_pred HHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhccccccccccc
Q 004989 135 YAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVT 214 (720)
Q Consensus 135 ~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~ 214 (720)
.|+|++++|||||||+||||+.+|.+||||||+|+....+ +|.
T Consensus 115 ~~cHk~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~p---------------------------------gd~---- 157 (396)
T KOG0593|consen 115 HFCHKNNCIHRDIKPENILITQNGVVKLCDFGFARTLSAP---------------------------------GDN---- 157 (396)
T ss_pred hhhhhcCeecccCChhheEEecCCcEEeccchhhHhhcCC---------------------------------cch----
Confidence 9999999999999999999999999999998888553221 000
Q ss_pred CCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC-CCCcccc
Q 004989 215 APTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASD 293 (720)
Q Consensus 215 ~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sD 293 (720)
-+.++.|.||+|||.+.|. +|++++|
T Consensus 158 -----------------------------------------------------YTDYVATRWYRaPELLvGDtqYG~pVD 184 (396)
T KOG0593|consen 158 -----------------------------------------------------YTDYVATRWYRAPELLVGDTQYGKPVD 184 (396)
T ss_pred -----------------------------------------------------hhhhhhhhhccChhhhcccCcCCCccc
Confidence 0225789999999999995 5999999
Q ss_pred chhhhchhhhccc--cCCCC-chHHHHHHHhhc-CCC------------------------CccccccCch----HHHHH
Q 004989 294 IYRLGVLLFELFC--PFSTG-EEKTRTMSSLRH-RVL------------------------PPQLLLKFPK----EASFC 341 (720)
Q Consensus 294 IwSLGvll~eLlt--pf~~~-~~~~~~~~~l~~-~~~------------------------p~~~~~~~p~----~~~Li 341 (720)
|||+||++.||++ |+.+. .+....+..... +.+ +..+...+|. .++|+
T Consensus 185 iWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~ 264 (396)
T KOG0593|consen 185 IWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLL 264 (396)
T ss_pred chhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeeecCCCCCccchhhhcccchHHHHHHH
Confidence 9999999999999 65444 333322222111 111 1112223332 34999
Q ss_pred HHcCCCCCCCCCChHHHHcCcccCC
Q 004989 342 LWLLHPEPSGRPKMGELLQSEFLNE 366 (720)
Q Consensus 342 ~~~L~~dP~~Rpta~eiL~hp~~~~ 366 (720)
..||+.||.+|++.+++|.||||..
T Consensus 265 k~cL~~dP~~R~sc~qll~H~yFd~ 289 (396)
T KOG0593|consen 265 KKCLKMDPDDRLSCEQLLHHPYFDG 289 (396)
T ss_pred HHHhcCCccccccHHHHhcChHHHH
Confidence 9999999999999999999999943
No 6
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=7.7e-39 Score=317.28 Aligned_cols=197 Identities=18% Similarity=0.253 Sum_probs=161.9
Q ss_pred hhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHH---hCCCCCCCHHHHHHHHHHHHHHHHHHHH--
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWL---DKPKRSVDVYECLHIFRQIVEIVYAAHS-- 139 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L---~~~~~~l~~~~~~~i~~QIl~aL~yLHs-- 139 (720)
.|+.+|++|+|||||++|+..+..+.. -++||||| .+|+|.+.| ++..+.+++..++.+|.|++.||.++|+
T Consensus 67 ~Ei~lLkQL~HpNIVqYy~~~f~~~~e--vlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~ 144 (375)
T KOG0591|consen 67 KEISLLKQLNHPNIVQYYAHSFIEDNE--VLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKI 144 (375)
T ss_pred HHHHHHHhcCCchHHHHHHHhhhccch--hhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccc
Confidence 788899999999999999944433332 26899999 999999988 4456669999999999999999999999
Q ss_pred CC--ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCC
Q 004989 140 QG--IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 140 ~g--IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~ 217 (720)
.. |+||||||.||+|+.+|.|||.|||+++. ..
T Consensus 145 ~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~---------------------------------------------l~ 179 (375)
T KOG0591|consen 145 PRGTVMHRDIKPANIFLTANGVVKLGDFGLGRF---------------------------------------------LS 179 (375)
T ss_pred cccceeeccCcchheEEcCCCceeeccchhHhH---------------------------------------------hc
Confidence 45 99999999999999999999966665533 22
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhh
Q 004989 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRL 297 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSL 297 (720)
+.... ....+|||+||+||.+.+.+|+++||||||
T Consensus 180 s~~tf---------------------------------------------A~S~VGTPyYMSPE~i~~~~Y~~kSDiWsl 214 (375)
T KOG0591|consen 180 SKTTF---------------------------------------------AHSLVGTPYYMSPERIHESGYNFKSDIWSL 214 (375)
T ss_pred chhHH---------------------------------------------HHhhcCCCcccCHHHHhcCCCCcchhHHHH
Confidence 21111 123799999999999999999999999999
Q ss_pred hchhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchH-HHHHHHcCCCCCCCCCCh
Q 004989 298 GVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKE-ASFCLWLLHPEPSGRPKM 355 (720)
Q Consensus 298 Gvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~-~~Li~~~L~~dP~~Rpta 355 (720)
||++|||+. ||.+. ........|.++.+||-+...++.. ..+|..|+.+||..||+.
T Consensus 215 GCllyEMcaL~~PF~g~-n~~~L~~KI~qgd~~~~p~~~YS~~l~~li~~ci~vd~~~RP~t 275 (375)
T KOG0591|consen 215 GCLLYEMCALQSPFYGD-NLLSLCKKIEQGDYPPLPDEHYSTDLRELINMCIAVDPEQRPDT 275 (375)
T ss_pred HHHHHHHHhcCCCcccc-cHHHHHHHHHcCCCCCCcHHHhhhHHHHHHHHHccCCcccCCCc
Confidence 999999998 89887 4556777888888877664545444 489999999999999986
No 7
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.8e-38 Score=345.43 Aligned_cols=237 Identities=20% Similarity=0.249 Sum_probs=191.9
Q ss_pred CCCCCCcccccccccC-CCCccchhhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCC
Q 004989 39 DRNPRLLRGERFGVRG-DDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKR 116 (720)
Q Consensus 39 ~~~~~~~~~~r~~~~~-~~~~~~~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~ 116 (720)
+...+..++.+++... ..+..--.+.|+|++||.-+.||||+++|++ +++.. ++|+|.|| .||.|+++|..+++
T Consensus 33 h~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydV-we~~~---~lylvlEyv~gGELFdylv~kG~ 108 (786)
T KOG0588|consen 33 HAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDV-WENKQ---HLYLVLEYVPGGELFDYLVRKGP 108 (786)
T ss_pred cccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeee-eccCc---eEEEEEEecCCchhHHHHHhhCC
Confidence 3556677777776655 5555566689999999999999999999994 44443 68999999 99999999966554
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCch
Q 004989 117 SVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPL 196 (720)
Q Consensus 117 ~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 196 (720)
+++.++.++|+||+.||.|||..+|+||||||+|+||+..+++||+|||+|..--.
T Consensus 109 -l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~----------------------- 164 (786)
T KOG0588|consen 109 -LPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKNNIKIADFGMASLEVP----------------------- 164 (786)
T ss_pred -CCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcccCEeeeccceeecccC-----------------------
Confidence 99999999999999999999999999999999999999999999998888732100
Q ss_pred hhhhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCc
Q 004989 197 DMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNW 276 (720)
Q Consensus 197 ~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~ 276 (720)
.++.. ..||+|+
T Consensus 165 ------------------------------------------------gklLe--------------------TSCGSPH 176 (786)
T KOG0588|consen 165 ------------------------------------------------GKLLE--------------------TSCGSPH 176 (786)
T ss_pred ------------------------------------------------Ccccc--------------------ccCCCcc
Confidence 01111 1489999
Q ss_pred ccCcccccCCCC-Cccccchhhhchhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCC
Q 004989 277 YASPEELAGAPV-SCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGR 352 (720)
Q Consensus 277 Y~APE~l~~~~~-s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~R 352 (720)
|.|||++.|.+| +.++||||.|||||.||+ ||+..+.. ..+..++++.+.-. ....++..+||.+||..||++|
T Consensus 177 YA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir-~LLlKV~~G~f~MP-s~Is~eaQdLLr~ml~VDp~~R 254 (786)
T KOG0588|consen 177 YAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIR-VLLLKVQRGVFEMP-SNISSEAQDLLRRMLDVDPSTR 254 (786)
T ss_pred cCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHH-HHHHHHHcCcccCC-CcCCHHHHHHHHHHhccCcccc
Confidence 999999999997 899999999999999999 89865554 56667777765322 2233455599999999999999
Q ss_pred CChHHHHcCcccCCCccchHH
Q 004989 353 PKMGELLQSEFLNEPRDSMEE 373 (720)
Q Consensus 353 pta~eiL~hp~~~~~~~~l~e 373 (720)
.|++||+.|||+......-..
T Consensus 255 iT~~eI~kHP~l~g~~~~~~~ 275 (786)
T KOG0588|consen 255 ITTEEILKHPFLSGYTSLPSS 275 (786)
T ss_pred ccHHHHhhCchhhcCCCCChh
Confidence 999999999999987554333
No 8
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-38 Score=328.58 Aligned_cols=225 Identities=18% Similarity=0.269 Sum_probs=180.4
Q ss_pred hhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCcee
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|+.||.+++||.||+++. .|++.. .+|+|+|| .||.|+-.|.+.+. +++..++.|+..|+.||.|||++||||
T Consensus 74 ~Er~IL~~v~hPFiv~l~y-sFQt~~---kLylVld~~~GGeLf~hL~~eg~-F~E~~arfYlaEi~lAL~~LH~~gIiy 148 (357)
T KOG0598|consen 74 AERNILSKIKHPFIVKLIY-SFQTEE---KLYLVLDYLNGGELFYHLQREGR-FSEDRARFYLAEIVLALGYLHSKGIIY 148 (357)
T ss_pred HHHHHHHhCCCCcEeeeEE-ecccCC---eEEEEEeccCCccHHHHHHhcCC-cchhHHHHHHHHHHHHHHHHHhCCeee
Confidence 7788999999999999999 676765 67999999 99999999965554 999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccc
Q 004989 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+||||+..|+++|+|||+|+..-... +
T Consensus 149 RDlKPENILLd~~GHi~LtDFgL~k~~~~~~---------------------------------~--------------- 180 (357)
T KOG0598|consen 149 RDLKPENILLDEQGHIKLTDFGLCKEDLKDG---------------------------------D--------------- 180 (357)
T ss_pred ccCCHHHeeecCCCcEEEeccccchhcccCC---------------------------------C---------------
Confidence 9999999999999999999999884321110 0
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhc
Q 004989 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 304 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eL 304 (720)
.....+||+.|||||++.+.+|+.++|+|||||++|||
T Consensus 181 ------------------------------------------~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeM 218 (357)
T KOG0598|consen 181 ------------------------------------------ATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEM 218 (357)
T ss_pred ------------------------------------------ccccccCCccccChHHHhcCCCCcccchHhHHHHHHHH
Confidence 00115899999999999999999999999999999999
Q ss_pred cc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCC----ChHHHHcCcccCCC-ccchHHHHH
Q 004989 305 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP----KMGELLQSEFLNEP-RDSMEEREA 376 (720)
Q Consensus 305 lt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rp----ta~eiL~hp~~~~~-~~~l~e~~~ 376 (720)
++ ||...+.. .++..+.+...+....-..+...+|+.++|..||.+|. .+.+|-+||||... ++.+..++.
T Consensus 219 L~G~pPF~~~~~~-~~~~~I~~~k~~~~p~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~HpfF~~inW~~l~~k~l 297 (357)
T KOG0598|consen 219 LTGKPPFYAEDVK-KMYDKILKGKLPLPPGYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRHPFFKGINWEKLLAKKL 297 (357)
T ss_pred hhCCCCCcCccHH-HHHHHHhcCcCCCCCccCCHHHHHHHHHHhccCHHHhcCCCCChHHhhcCcccccCCHHHHHhcCC
Confidence 99 66665544 55555554442222111335556999999999999995 78999999999987 556666666
Q ss_pred HHHHhhhhhh
Q 004989 377 AIELREQIDE 386 (720)
Q Consensus 377 ~~~~~e~~~~ 386 (720)
.+++.+....
T Consensus 298 ~PpF~P~~~~ 307 (357)
T KOG0598|consen 298 SPPFKPNVTG 307 (357)
T ss_pred CCCeecCCCC
Confidence 5565554444
No 9
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-38 Score=333.49 Aligned_cols=208 Identities=21% Similarity=0.301 Sum_probs=166.8
Q ss_pred hhhhhcccCC-CCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCcee
Q 004989 66 SDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~L~~l~-HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
||+..|.+|+ |||||+|++++.+.+. .+|+||||+..+|.++++.+++.|++..++.|++||++||+|+|.+|+.|
T Consensus 57 REvksL~kln~hpniikL~Evi~d~~~---~L~fVfE~Md~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFH 133 (538)
T KOG0661|consen 57 REVKSLRKLNPHPNIIKLKEVIRDNDR---ILYFVFEFMDCNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFH 133 (538)
T ss_pred HHHHHHHhcCCCCcchhhHHHhhccCc---eEeeeHHhhhhhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCccc
Confidence 8888999999 9999999995555443 68999999999999999777888999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccc
Q 004989 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+|||+.....+||+|||+|+...+.
T Consensus 134 RDlKPENiLi~~~~~iKiaDFGLARev~Sk-------------------------------------------------- 163 (538)
T KOG0661|consen 134 RDLKPENILISGNDVIKIADFGLAREVRSK-------------------------------------------------- 163 (538)
T ss_pred ccCChhheEecccceeEecccccccccccC--------------------------------------------------
Confidence 999999999998899999888887543111
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC-CCccccchhhhchhhh
Q 004989 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFE 303 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGvll~e 303 (720)
.| -+.++-|.||+|||+|.... |+.++||||+|||++|
T Consensus 164 ---------------------------------------pP--YTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aE 202 (538)
T KOG0661|consen 164 ---------------------------------------PP--YTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAE 202 (538)
T ss_pred ---------------------------------------CC--cchhhhcccccchHHhhhccccCCchHHHHHHHHHHH
Confidence 00 12368899999999987666 8999999999999999
Q ss_pred ccc--c-CCCCchHHHHHHHhh---cC-----------------CCCc-------c-ccccCchHHHHHHHcCCCCCCCC
Q 004989 304 LFC--P-FSTGEEKTRTMSSLR---HR-----------------VLPP-------Q-LLLKFPKEASFCLWLLHPEPSGR 352 (720)
Q Consensus 304 Llt--p-f~~~~~~~~~~~~l~---~~-----------------~~p~-------~-~~~~~p~~~~Li~~~L~~dP~~R 352 (720)
+.+ | |++..+..+.++... .. .+|. . ++...++.++||.+||.+||.+|
T Consensus 203 l~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kR 282 (538)
T KOG0661|consen 203 LYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKR 282 (538)
T ss_pred HHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccC
Confidence 998 6 444444444333221 10 1111 1 12223344599999999999999
Q ss_pred CChHHHHcCcccCCC
Q 004989 353 PKMGELLQSEFLNEP 367 (720)
Q Consensus 353 pta~eiL~hp~~~~~ 367 (720)
|||.|+|+||||+..
T Consensus 283 pTA~~al~~pffq~~ 297 (538)
T KOG0661|consen 283 PTASQALQHPFFQVG 297 (538)
T ss_pred ccHHHHhcCcccccc
Confidence 999999999999976
No 10
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-37 Score=332.52 Aligned_cols=216 Identities=18% Similarity=0.268 Sum_probs=172.3
Q ss_pred hhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 66 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
+|...|.+| .||.||+||. -|+|+. .+|+|+|| .+|+|.++|++.+. |++..++.|+.||++||+|||++|||
T Consensus 122 ~Ek~~l~~L~~hPgivkLy~-TFQD~~---sLYFvLe~A~nGdll~~i~K~Gs-fde~caR~YAAeIldAleylH~~GII 196 (604)
T KOG0592|consen 122 REKEALTQLSGHPGIVKLYF-TFQDEE---SLYFVLEYAPNGDLLDLIKKYGS-FDETCARFYAAEILDALEYLHSNGII 196 (604)
T ss_pred HHHHHHHHhhCCCCeEEEEE-Eeeccc---ceEEEEEecCCCcHHHHHHHhCc-chHHHHHHHHHHHHHHHHHHHhcCce
Confidence 667778888 8999999999 677765 46999999 99999999977654 99999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+||||+.+++++|.|||.|+.++....... ++.
T Consensus 197 HRDlKPENILLd~dmhikITDFGsAK~l~~~~~~~~-------------------------------~~~---------- 235 (604)
T KOG0592|consen 197 HRDLKPENILLDKDGHIKITDFGSAKILSPSQKSQE-------------------------------NPV---------- 235 (604)
T ss_pred eccCChhheeEcCCCcEEEeeccccccCChhhcccc-------------------------------Ccc----------
Confidence 999999999999999999999999976533211000 000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
.. ... .. .....+||..|.+||+|.....++++|||+||||||.
T Consensus 236 --------~~------------~~a---------~s-------~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQ 279 (604)
T KOG0592|consen 236 --------DP------------NQA---------SS-------RRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQ 279 (604)
T ss_pred --------Cc------------ccc---------cC-------cccceeeeecccCHHHhcCCCCCcccchHHHHHHHHH
Confidence 00 000 00 0123799999999999999999999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhc--CCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 304 LFC---PFSTGEEKTRTMSSLRH--RVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~--~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|+. ||...++. .+++.|.+ -.+|+.++ +...+|+.++|..||.+|+|+.+|.+||||...
T Consensus 280 mlaG~PPFra~Ney-liFqkI~~l~y~fp~~fp---~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~~V 344 (604)
T KOG0592|consen 280 MLAGQPPFRAANEY-LIFQKIQALDYEFPEGFP---EDARDLIKKLLVRDPSDRLTSQQIKAHPFFEGV 344 (604)
T ss_pred HhcCCCCCccccHH-HHHHHHHHhcccCCCCCC---HHHHHHHHHHHccCccccccHHHHhhCcccccC
Confidence 999 77776665 34444443 23444432 344499999999999999999999999999998
No 11
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.9e-37 Score=322.06 Aligned_cols=216 Identities=21% Similarity=0.252 Sum_probs=167.7
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
.++|..+|++++|||||+++| ....... ..+++.||| .||+|.+++.+.+..+++..++.+.+||++||.|||++||
T Consensus 61 l~~Ei~iL~~l~~p~IV~~~G-~~~~~~~-~~~~i~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~ 138 (313)
T KOG0198|consen 61 LEREIRILSRLNHPNIVQYYG-SSSSREN-DEYNIFMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGI 138 (313)
T ss_pred HHHHHHHHHhCCCCCEEeeCC-ccccccC-eeeEeeeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence 358889999999999999999 3222221 368999999 9999999997665479999999999999999999999999
Q ss_pred eeccCCCCcEEEcc-CCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 143 VVHNVRPSCFVMSS-FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 143 vHrDLKP~NILl~~-~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|||||||+|||++. ++.+||+|||++........
T Consensus 139 vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~--------------------------------------------- 173 (313)
T KOG0198|consen 139 VHCDIKPANILLDPSNGDVKLADFGLAKKLESKGT--------------------------------------------- 173 (313)
T ss_pred eccCcccceEEEeCCCCeEEeccCccccccccccc---------------------------------------------
Confidence 99999999999999 79999999998744321000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC-CCccccchhhhch
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVL 300 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGvl 300 (720)
.+.......||+.|||||++.+.. ..+++|||||||+
T Consensus 174 ------------------------------------------~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCt 211 (313)
T KOG0198|consen 174 ------------------------------------------KSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCT 211 (313)
T ss_pred ------------------------------------------cccccccccCCccccCchhhcCCCcCCccchhhhcCCE
Confidence 000011257999999999998632 4469999999999
Q ss_pred hhhccc---cCCC-CchHHHHHHHhhcCCCCccccccCchH-HHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004989 301 LFELFC---PFST-GEEKTRTMSSLRHRVLPPQLLLKFPKE-ASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 301 l~eLlt---pf~~-~~~~~~~~~~l~~~~~p~~~~~~~p~~-~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
+.||+| ||.. ................| .++...+.. .+|+.+||..||++||||.++|+|||+.....
T Consensus 212 VvEM~Tg~~PW~~~~~~~~~~~~ig~~~~~P-~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~~~ 284 (313)
T KOG0198|consen 212 VVEMLTGKPPWSEFFEEAEALLLIGREDSLP-EIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQNSI 284 (313)
T ss_pred EEeccCCCCcchhhcchHHHHHHHhccCCCC-CCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhcccc
Confidence 999999 4544 22233344444444444 444445544 49999999999999999999999999987643
No 12
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.6e-37 Score=331.57 Aligned_cols=204 Identities=25% Similarity=0.376 Sum_probs=169.0
Q ss_pred chhhhhhcccCC-CCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 64 KHSDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 64 ~~~e~~~L~~l~-HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
..||..++..++ ||||+++++ ++.... .+|+|||| .||+|.+++.+ ..++.+.+++.+|+||+.||+|||++|
T Consensus 66 i~rEi~~~~~~~~HpnI~~l~e-v~~t~~---~~~ivmEy~~gGdL~~~i~~-~g~l~E~~ar~~F~Qlisav~y~H~~g 140 (370)
T KOG0583|consen 66 IKREISILRRLRSHPNIIRLLE-VFATPT---KIYIVMEYCSGGDLFDYIVN-KGRLKEDEARKYFRQLISAVAYCHSRG 140 (370)
T ss_pred hHHHHHHHHHhccCCCEeEEEE-EEecCC---eEEEEEEecCCccHHHHHHH-cCCCChHHHHHHHHHHHHHHHHHHhCC
Confidence 337889999999 999999999 666665 48999999 88999999976 445999999999999999999999999
Q ss_pred ceeccCCCCcEEEccC-CceEEeecCcccCCC-CCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCC
Q 004989 142 IVVHNVRPSCFVMSSF-NHVSFIESASCSDSG-SDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 142 IvHrDLKP~NILl~~~-~~vkliDfg~a~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
|+||||||+|||++.+ +++||+|||++.... .+ ++
T Consensus 141 i~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~~~~----------------------------------~~--------- 177 (370)
T KOG0583|consen 141 IVHRDLKPENILLDGNEGNLKLSDFGLSAISPGED----------------------------------GL--------- 177 (370)
T ss_pred EeeCCCCHHHEEecCCCCCEEEeccccccccCCCC----------------------------------Cc---------
Confidence 9999999999999998 999999999884331 11 00
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC-C-Cccccchhh
Q 004989 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-V-SCASDIYRL 297 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~-s~~sDIwSL 297 (720)
....+||+.|+|||++.+.. | +.++||||+
T Consensus 178 ------------------------------------------------l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~ 209 (370)
T KOG0583|consen 178 ------------------------------------------------LKTFCGSPAYAAPEVLSGKGTYSGKAADVWSL 209 (370)
T ss_pred ------------------------------------------------ccCCCCCcccCCHHHhCCCCCcCCchhhhhhh
Confidence 01158999999999999987 7 589999999
Q ss_pred hchhhhccc---cCCCCchHHHHHHHhhcCC--CCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCC
Q 004989 298 GVLLFELFC---PFSTGEEKTRTMSSLRHRV--LPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 366 (720)
Q Consensus 298 Gvll~eLlt---pf~~~~~~~~~~~~l~~~~--~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~ 366 (720)
||+||.|++ ||...... .+...+..+. +|..+. .++..+|+.+||.+||.+|+|+.+|+.||||+.
T Consensus 210 GViLy~ml~G~~PF~d~~~~-~l~~ki~~~~~~~p~~~~--S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~~ 280 (370)
T KOG0583|consen 210 GVILYVLLCGRLPFDDSNVP-NLYRKIRKGEFKIPSYLL--SPEARSLIEKMLVPDPSTRITLLEILEHPWFQK 280 (370)
T ss_pred HHHHHHHHhCCCCCCCccHH-HHHHHHhcCCccCCCCcC--CHHHHHHHHHHcCCCcccCCCHHHHhhChhhcc
Confidence 999999999 67664443 3444455443 333333 667779999999999999999999999999997
No 13
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-37 Score=317.01 Aligned_cols=245 Identities=17% Similarity=0.197 Sum_probs=180.9
Q ss_pred CCCCCcccccccccCCCCccchhhchhhhhhcccCCCCCceecccceee-cCCCCCcEEEEEecCCCCHHHHHhCCCCCC
Q 004989 40 RNPRLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCE-NEAAIDPFVHAIEWGDVSLRQWLDKPKRSV 118 (720)
Q Consensus 40 ~~~~~~~~~r~~~~~~~~~~~~~r~~~e~~~L~~l~HpnIV~l~~~~~~-~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l 118 (720)
.+...++++++. .--...-..-|..||..+|.+++|+||+.+++++.. ......-+|+|+|+++.+|.+.|+.. ..+
T Consensus 45 ~t~~~VAIKKi~-~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvYiV~elMetDL~~iik~~-~~L 122 (359)
T KOG0660|consen 45 RTGEKVAIKKIL-NPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVYLVFELMETDLHQIIKSQ-QDL 122 (359)
T ss_pred CCCCEeehhhhh-hhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccceeEEehhHHhhHHHHHHHcC-ccc
Confidence 444555555544 111223344477799999999999999999994443 23345569999999999999999554 449
Q ss_pred CHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhh
Q 004989 119 DVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDM 198 (720)
Q Consensus 119 ~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (720)
++..+..+++||+.||.|+|+.||+||||||+|+|++.+..+|++|||+|+...... .
T Consensus 123 ~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~~-~--------------------- 180 (359)
T KOG0660|consen 123 TDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLKICDFGLARYLDKFF-E--------------------- 180 (359)
T ss_pred cHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCCCEEeccccceeeccccC-c---------------------
Confidence 999999999999999999999999999999999999999999998888885432110 0
Q ss_pred hhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCccc
Q 004989 199 LQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYA 278 (720)
Q Consensus 199 ~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~ 278 (720)
.+| -+.++.|.||+
T Consensus 181 ---------~~~---------------------------------------------------------mTeYVaTRWYR 194 (359)
T KOG0660|consen 181 ---------DGF---------------------------------------------------------MTEYVATRWYR 194 (359)
T ss_pred ---------ccc---------------------------------------------------------hhcceeeeeec
Confidence 000 12368899999
Q ss_pred CcccccCC-CCCccccchhhhchhhhccc--cCCCCchHHHHHH------------------------Hhhc-CCCC---
Q 004989 279 SPEELAGA-PVSCASDIYRLGVLLFELFC--PFSTGEEKTRTMS------------------------SLRH-RVLP--- 327 (720)
Q Consensus 279 APE~l~~~-~~s~~sDIwSLGvll~eLlt--pf~~~~~~~~~~~------------------------~l~~-~~~p--- 327 (720)
|||++... .|+.+.||||+||||.||++ |..+.......+. .+.. ...|
T Consensus 195 APElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~ 274 (359)
T KOG0660|consen 195 APELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQP 274 (359)
T ss_pred CHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCC
Confidence 99998654 49999999999999999999 4332221111111 1111 1111
Q ss_pred --ccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCccchHHH
Q 004989 328 --PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEER 374 (720)
Q Consensus 328 --~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~l~e~ 374 (720)
..++...|...+|+.+||..||.+|+|++|+|+|||+....++-.|.
T Consensus 275 f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~hdp~dEP 323 (359)
T KOG0660|consen 275 FSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPYHDPEDEP 323 (359)
T ss_pred HHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhhcCCccCC
Confidence 12334556667999999999999999999999999999998876664
No 14
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.5e-36 Score=320.70 Aligned_cols=234 Identities=18% Similarity=0.203 Sum_probs=175.9
Q ss_pred CCCcccccccccCCCCccchhhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHH
Q 004989 42 PRLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVY 121 (720)
Q Consensus 42 ~~~~~~~r~~~~~~~~~~~~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~ 121 (720)
-+.++-+|+.+...... +.+=..||+.||.+|+|||||+|.+.+.... ...+|+|+||+..+|.-++..++-.|++.
T Consensus 142 gkivALKKvr~d~~~~~-~~~t~~REI~ILr~l~HpNIikL~eivt~~~--~~siYlVFeYMdhDL~GLl~~p~vkft~~ 218 (560)
T KOG0600|consen 142 GKIVALKKVRFDNEKEG-FPITAIREIKILRRLDHPNIIKLEEIVTSKL--SGSIYLVFEYMDHDLSGLLSSPGVKFTEP 218 (560)
T ss_pred CcEEEEEEeecccCCCc-chHHHHHHHHHHHhcCCCcccceeeEEEecC--CceEEEEEecccchhhhhhcCCCcccChH
Confidence 34456666666554322 2222348899999999999999999666551 22589999999999999998877789999
Q ss_pred HHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhh
Q 004989 122 ECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQR 201 (720)
Q Consensus 122 ~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (720)
+++.|++||+.||+|||++||+|||||.+||||+.+|.+||+|||+|+.+.....
T Consensus 219 qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~~------------------------- 273 (560)
T KOG0600|consen 219 QIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSGS------------------------- 273 (560)
T ss_pred HHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEEeccccceeeccCCCC-------------------------
Confidence 9999999999999999999999999999999999999999988887754322100
Q ss_pred hhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcc
Q 004989 202 RTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPE 281 (720)
Q Consensus 202 r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE 281 (720)
.+ -+..+-|.||+|||
T Consensus 274 --------------------------------------------------------------~~--~T~rVvTLWYRpPE 289 (560)
T KOG0600|consen 274 --------------------------------------------------------------AP--YTSRVVTLWYRPPE 289 (560)
T ss_pred --------------------------------------------------------------cc--cccceEEeeccChH
Confidence 00 12257799999999
Q ss_pred cccCCC-CCccccchhhhchhhhccc--c-CCCCchHHHHHHHhhc-CCCCcccc-------------------------
Q 004989 282 ELAGAP-VSCASDIYRLGVLLFELFC--P-FSTGEEKTRTMSSLRH-RVLPPQLL------------------------- 331 (720)
Q Consensus 282 ~l~~~~-~s~~sDIwSLGvll~eLlt--p-f~~~~~~~~~~~~l~~-~~~p~~~~------------------------- 331 (720)
+|.|.. |++++|+||+||||.||+. | |.+..+..+......- +.+.+..+
T Consensus 290 LLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~ 369 (560)
T KOG0600|consen 290 LLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHATIFKPQQPYKRRLRETF 369 (560)
T ss_pred HhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCCcccccCCCCcccchHHHHh
Confidence 999987 9999999999999999999 4 4444444333222221 11111100
Q ss_pred -ccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 332 -LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 332 -~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
...+...+|+..||..||.+|.||.++|+|+||...
T Consensus 370 ~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF~t~ 406 (560)
T KOG0600|consen 370 KDFPASALDLLEKLLSLDPDKRGTASSALQSEYFTTE 406 (560)
T ss_pred ccCCHHHHHHHHHHhccCccccccHHHHhcCcccccC
Confidence 011223499999999999999999999999999554
No 15
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-36 Score=325.03 Aligned_cols=228 Identities=18% Similarity=0.254 Sum_probs=181.0
Q ss_pred CCCCCcccccccccCCCCccchhhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCC
Q 004989 40 RNPRLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSV 118 (720)
Q Consensus 40 ~~~~~~~~~r~~~~~~~~~~~~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l 118 (720)
.+...++++|+.+++.....-.| .|..+|...+|+|||.+++.+... ..+|+|||| .||+|.+.+.... +
T Consensus 296 ~~~~~VaiK~m~l~~Q~~keLil---nEi~Vm~~~~H~NiVnfl~Sylv~----deLWVVMEym~ggsLTDvVt~~~--~ 366 (550)
T KOG0578|consen 296 STKQEVAIKRMDLRKQPKKELLL---NEILVMRDLHHPNIVNFLDSYLVG----DELWVVMEYMEGGSLTDVVTKTR--M 366 (550)
T ss_pred cCCceEEEEEEEeccCCchhhhH---HHHHHHHhccchHHHHHHHHhccc----ceeEEEEeecCCCchhhhhhccc--c
Confidence 34555677777776654332222 678899999999999999954444 257999999 9999999885443 9
Q ss_pred CHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhh
Q 004989 119 DVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDM 198 (720)
Q Consensus 119 ~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (720)
+|.++..|+++++.||+|||.+||||||||.+|||+..+|.+||+|||+|..+....
T Consensus 367 ~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~----------------------- 423 (550)
T KOG0578|consen 367 TEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQ----------------------- 423 (550)
T ss_pred cHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCcEEEeeeeeeecccccc-----------------------
Confidence 999999999999999999999999999999999999999999999999994431110
Q ss_pred hhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCccc
Q 004989 199 LQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYA 278 (720)
Q Consensus 199 ~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~ 278 (720)
.+....+|||+||
T Consensus 424 -------------------------------------------------------------------~KR~TmVGTPYWM 436 (550)
T KOG0578|consen 424 -------------------------------------------------------------------SKRSTMVGTPYWM 436 (550)
T ss_pred -------------------------------------------------------------------CccccccCCCCcc
Confidence 0112369999999
Q ss_pred CcccccCCCCCccccchhhhchhhhccc---cCCCCchHHHHHHHhh-cCCCCcccccc-CchHHHHHHHcCCCCCCCCC
Q 004989 279 SPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLR-HRVLPPQLLLK-FPKEASFCLWLLHPEPSGRP 353 (720)
Q Consensus 279 APE~l~~~~~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~-~~~~p~~~~~~-~p~~~~Li~~~L~~dP~~Rp 353 (720)
|||++....|++++||||||+++.||+- ||....+. .++..|. ++.+.-..+.. .+...+|+.+||..||.+|+
T Consensus 437 APEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~Pl-rAlyLIa~ng~P~lk~~~klS~~~kdFL~~cL~~dv~~Ra 515 (550)
T KOG0578|consen 437 APEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPL-RALYLIATNGTPKLKNPEKLSPELKDFLDRCLVVDVEQRA 515 (550)
T ss_pred chhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChH-HHHHHHhhcCCCCcCCccccCHHHHHHHHHHhhcchhcCC
Confidence 9999999999999999999999999998 77775555 4444444 34333333333 34556999999999999999
Q ss_pred ChHHHHcCcccCCC
Q 004989 354 KMGELLQSEFLNEP 367 (720)
Q Consensus 354 ta~eiL~hp~~~~~ 367 (720)
+|.|+|+||||+..
T Consensus 516 sA~eLL~HpFl~~a 529 (550)
T KOG0578|consen 516 SAKELLEHPFLKMA 529 (550)
T ss_pred CHHHHhcChhhhhc
Confidence 99999999999554
No 16
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=1.2e-36 Score=325.75 Aligned_cols=278 Identities=15% Similarity=0.175 Sum_probs=184.9
Q ss_pred chhhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 004989 60 FELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 60 ~~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
.++|.|| .+|...++|+||+||. .|++.. ++|||||| +||++..+|.+.+ .|++..++.|+.+++.|++.||
T Consensus 186 ~hV~aER--diL~~~ds~~vVKLyY-sFQD~~---~LYLiMEylPGGD~mTLL~~~~-~L~e~~arfYiaE~vlAI~~iH 258 (550)
T KOG0605|consen 186 EHVRAER--DILAEVDSPWVVKLYY-SFQDKE---YLYLIMEYLPGGDMMTLLMRKD-TLTEDWARFYIAETVLAIESIH 258 (550)
T ss_pred HHHHHHH--HHhhhcCCCcEEEEEE-EecCCC---eeEEEEEecCCccHHHHHHhcC-cCchHHHHHHHHHHHHHHHHHH
Confidence 3445544 4788899999999999 777776 67999999 9999999996554 4999999999999999999999
Q ss_pred HCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhh--hcccccccccccCC
Q 004989 139 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRR--TRLRREDLQLVTAP 216 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r--~~~~l~Dfgla~~~ 216 (720)
+.|+|||||||+|+||+..|++||.|||+|.........+... .++.... ......||.-...
T Consensus 259 ~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~- 323 (550)
T KOG0605|consen 259 QLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKHRIESYR--------------LDEQMQINLSEAKPSDFPKFNT- 323 (550)
T ss_pred HcCcccccCChhheeecCCCCEeeccccccchhhhhhhhhhhc--------------chhhhhhhhccCCCcccccccc-
Confidence 9999999999999999999999999999995432221110000 0000000 0000011100000
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchh
Q 004989 217 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYR 296 (720)
Q Consensus 217 ~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwS 296 (720)
.... . -....-+........-.-..+|||.|||||++.+..|+..+|+||
T Consensus 324 -----~~~~----------------------~---~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWS 373 (550)
T KOG0605|consen 324 -----PRST----------------------M---SRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWS 373 (550)
T ss_pred -----ccch----------------------h---hHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHH
Confidence 0000 0 000000111111111122369999999999999999999999999
Q ss_pred hhchhhhccccCCCC--chHHHHHHHhhcCC----CCccccccCchHHHHHHHcCCCCCCCCC---ChHHHHcCcccCCC
Q 004989 297 LGVLLFELFCPFSTG--EEKTRTMSSLRHRV----LPPQLLLKFPKEASFCLWLLHPEPSGRP---KMGELLQSEFLNEP 367 (720)
Q Consensus 297 LGvll~eLltpf~~~--~~~~~~~~~l~~~~----~p~~~~~~~p~~~~Li~~~L~~dP~~Rp---ta~eiL~hp~~~~~ 367 (720)
||||+||||.||+++ +....++..|.++. +|.. ....++..|||.+||. ||.+|. .+.||.+||||+..
T Consensus 374 LG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~-~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~HPfF~~v 451 (550)
T KOG0605|consen 374 LGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEE-VDLSDEAKDLITRLLC-DPENRLGSKGAEEIKKHPFFKGV 451 (550)
T ss_pred HHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCc-CcccHHHHHHHHHHhc-CHHHhcCcccHHHHhcCCccccC
Confidence 999999999955443 33345555555432 3332 2333555699999999 999996 69999999999988
Q ss_pred -ccchHHHHHHHHHhhhhhhHHHHHHH
Q 004989 368 -RDSMEEREAAIELREQIDEEELLLEF 393 (720)
Q Consensus 368 -~~~l~e~~~~~~~~e~~~~~e~L~~f 393 (720)
++.+-+.. .++.++..+......|
T Consensus 452 ~W~~l~~~~--apfvP~v~~~~DT~yF 476 (550)
T KOG0605|consen 452 DWDHLREMP--APFVPQVNSELDTQYF 476 (550)
T ss_pred CcchhhcCC--CCCCCCCCCccccccc
Confidence 55544433 4455545443333333
No 17
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=7.5e-36 Score=290.60 Aligned_cols=208 Identities=20% Similarity=0.249 Sum_probs=166.9
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
..++|+.|-..|.|||||++.+.+-+. ...|+|+|+ .|++|..-|-+. -.+++..+.++++||+++|+|+|.+|
T Consensus 56 ~l~rEarIC~~LqHP~IvrL~~ti~~~----~~~ylvFe~m~G~dl~~eIV~R-~~ySEa~aSH~~rQiLeal~yCH~n~ 130 (355)
T KOG0033|consen 56 KLEREARICRKLQHPNIVRLHDSIQEE----SFHYLVFDLVTGGELFEDIVAR-EFYSEADASHCIQQILEALAYCHSNG 130 (355)
T ss_pred HHHHHHHHHHhcCCCcEeehhhhhccc----ceeEEEEecccchHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 445888899999999999999933333 267999999 999998777333 23799999999999999999999999
Q ss_pred ceeccCCCCcEEEcc---CCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCC
Q 004989 142 IVVHNVRPSCFVMSS---FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 142 IvHrDLKP~NILl~~---~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
|||||+||+|+|+-+ ..-+||+|||++.+.+..
T Consensus 131 IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g-------------------------------------------- 166 (355)
T KOG0033|consen 131 IVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDG-------------------------------------------- 166 (355)
T ss_pred ceeccCChhheeeeeccCCCceeecccceEEEeCCc--------------------------------------------
Confidence 999999999999963 345899888888554311
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhh
Q 004989 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
... .| .+|||.|||||++...+|+..+|||+.|
T Consensus 167 ----------~~~------------------~G-------------------~~GtP~fmaPEvvrkdpy~kpvDiW~cG 199 (355)
T KOG0033|consen 167 ----------EAW------------------HG-------------------FAGTPGYLSPEVLKKDPYSKPVDIWACG 199 (355)
T ss_pred ----------ccc------------------cc-------------------ccCCCcccCHHHhhcCCCCCcchhhhhh
Confidence 000 11 5899999999999999999999999999
Q ss_pred chhhhccc---cCCCCchHHHHHHHhhcCC--CC-ccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 299 VLLFELFC---PFSTGEEKTRTMSSLRHRV--LP-PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~--~p-~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|+||-||. ||.+... ...+..|..+. +| |.+....|...+|+.+||..||.+|.|+.|+|+|||+.+.
T Consensus 200 ViLfiLL~G~~PF~~~~~-~rlye~I~~g~yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~HpWi~~r 273 (355)
T KOG0033|consen 200 VILYILLVGYPPFWDEDQ-HRLYEQIKAGAYDYPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALKHPWICNR 273 (355)
T ss_pred HHHHHHHhCCCCCCCccH-HHHHHHHhccccCCCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhCCchhcch
Confidence 99999999 5555333 36666666543 33 3555556666799999999999999999999999999985
No 18
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-36 Score=301.09 Aligned_cols=214 Identities=15% Similarity=0.220 Sum_probs=175.7
Q ss_pred hhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCcee
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|..+|..+.||.++++++ .+.+.. .+|+|||| +||.|..+|++.++ +++..++.|+.||+.||+|||+.+|++
T Consensus 93 nEk~vL~~v~~PFlv~l~~-t~~d~~---~lymvmeyv~GGElFS~Lrk~~r-F~e~~arFYAAeivlAleylH~~~iiY 167 (355)
T KOG0616|consen 93 NEKRVLKAVSHPFLVKLYG-TFKDNS---NLYMVMEYVPGGELFSYLRKSGR-FSEPHARFYAAEIVLALEYLHSLDIIY 167 (355)
T ss_pred hHHHHHhhccCceeEEEEE-eeccCC---eEEEEEeccCCccHHHHHHhcCC-CCchhHHHHHHHHHHHHHHHHhcCeee
Confidence 6778999999999999999 454443 68999999 99999999977655 999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccc
Q 004989 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+||||+.+|++||+|||+|+....
T Consensus 168 RDLKPENiLlD~~G~iKitDFGFAK~v~~--------------------------------------------------- 196 (355)
T KOG0616|consen 168 RDLKPENLLLDQNGHIKITDFGFAKRVSG--------------------------------------------------- 196 (355)
T ss_pred ccCChHHeeeccCCcEEEEeccceEEecC---------------------------------------------------
Confidence 99999999999999999999888733100
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhc
Q 004989 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 304 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eL 304 (720)
..-..+|||.|+|||++...+|..++|.|||||++|||
T Consensus 197 ------------------------------------------rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEM 234 (355)
T KOG0616|consen 197 ------------------------------------------RTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEM 234 (355)
T ss_pred ------------------------------------------cEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHH
Confidence 00126899999999999999999999999999999999
Q ss_pred cc---cCCCCchHHHHHHHhhcCC--CCccccccCchHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC-ccchHH
Q 004989 305 FC---PFSTGEEKTRTMSSLRHRV--LPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP-RDSMEE 373 (720)
Q Consensus 305 lt---pf~~~~~~~~~~~~l~~~~--~p~~~~~~~p~~~~Li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~-~~~l~e 373 (720)
+. ||...++ ..++..|..+. +|+.+ .+...+|+..+|+.|-.+|. ...+|..||||+.. +..+..
T Consensus 235 laG~pPF~~~~~-~~iY~KI~~~~v~fP~~f---s~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~wF~~v~W~~i~~ 310 (355)
T KOG0616|consen 235 LAGYPPFYDDNP-IQIYEKILEGKVKFPSYF---SSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPWFKGVDWEAILQ 310 (355)
T ss_pred HcCCCCCcCCCh-HHHHHHHHhCcccCCccc---CHHHHHHHHHHHhhhhHhhhcCcCCCccccccCcccccccHHHHhh
Confidence 99 5665555 46666666543 44443 35667999999999999993 57899999999987 455555
Q ss_pred HHHHHHHh
Q 004989 374 REAAIELR 381 (720)
Q Consensus 374 ~~~~~~~~ 381 (720)
+....++.
T Consensus 311 r~ie~P~~ 318 (355)
T KOG0616|consen 311 RKIEPPFE 318 (355)
T ss_pred ccccCCCC
Confidence 54444443
No 19
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=5.1e-36 Score=308.81 Aligned_cols=227 Identities=19% Similarity=0.267 Sum_probs=183.1
Q ss_pred CCCcccccccccCCCCccchhhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCH
Q 004989 42 PRLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDV 120 (720)
Q Consensus 42 ~~~~~~~r~~~~~~~~~~~~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~ 120 (720)
-|.++++-|.-..-.+.....+..||+.|++.|+||||+.+|. +|+..+ .+.||||| .+|.|.+|+...+ .+++
T Consensus 78 gR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyE-VFENkd---KIvivMEYaS~GeLYDYiSer~-~LsE 152 (668)
T KOG0611|consen 78 GREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYE-VFENKD---KIVIVMEYASGGELYDYISERG-SLSE 152 (668)
T ss_pred CcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhh-hhcCCc---eEEEEEEecCCccHHHHHHHhc-cccH
Confidence 3445555454444455566667778999999999999999999 666665 56999999 9999999995544 4999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhh
Q 004989 121 YECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQ 200 (720)
Q Consensus 121 ~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (720)
.+++++|+||+.||.|||.++|+|||||.+|||++.++++||+|||++-.+...
T Consensus 153 rEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~NiKIADFGLSNly~~~-------------------------- 206 (668)
T KOG0611|consen 153 REARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNNIKIADFGLSNLYADK-------------------------- 206 (668)
T ss_pred HHHHHHHHHHHHHHHHHhhccceecccchhheeecCCCCeeeeccchhhhhccc--------------------------
Confidence 999999999999999999999999999999999999999999988887322111
Q ss_pred hhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCc
Q 004989 201 RRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASP 280 (720)
Q Consensus 201 ~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~AP 280 (720)
.| ...++|+|-|.+|
T Consensus 207 --------kf---------------------------------------------------------LqTFCGSPLYASP 221 (668)
T KOG0611|consen 207 --------KF---------------------------------------------------------LQTFCGSPLYASP 221 (668)
T ss_pred --------cH---------------------------------------------------------HHHhcCCcccCCc
Confidence 01 0125899999999
Q ss_pred ccccCCCC-Cccccchhhhchhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChH
Q 004989 281 EELAGAPV-SCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMG 356 (720)
Q Consensus 281 E~l~~~~~-s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~ 356 (720)
|+++|.+| ++.+|-|||||+||.|+. ||++.+.. .+...|..+.+.... .-++...||+|||..||.+|.|+.
T Consensus 222 EIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk-~lvrQIs~GaYrEP~--~PSdA~gLIRwmLmVNP~RRATie 298 (668)
T KOG0611|consen 222 EIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHK-RLVRQISRGAYREPE--TPSDASGLIRWMLMVNPERRATIE 298 (668)
T ss_pred cccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHH-HHHHHhhcccccCCC--CCchHHHHHHHHHhcCcccchhHH
Confidence 99999997 799999999999999998 89887665 555666665543221 224556999999999999999999
Q ss_pred HHHcCcccCCC
Q 004989 357 ELLQSEFLNEP 367 (720)
Q Consensus 357 eiL~hp~~~~~ 367 (720)
+|..|=|++-.
T Consensus 299 DiAsHWWvNwg 309 (668)
T KOG0611|consen 299 DIASHWWVNWG 309 (668)
T ss_pred HHhhhheeecc
Confidence 99999888743
No 20
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-35 Score=309.43 Aligned_cols=213 Identities=16% Similarity=0.254 Sum_probs=164.4
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
+.|..+|+.++|||||++++ ++++++ .+|+|||| .||+|.+||++.++ +++..++.++.||+.||++||+++||
T Consensus 57 ~~Ei~iLkel~H~nIV~l~d-~~~~~~---~i~lVMEyC~gGDLs~yi~~~~~-l~e~t~r~Fm~QLA~alq~L~~~~Ii 131 (429)
T KOG0595|consen 57 LSEIKILKELKHPNIVRLLD-CIEDDD---FIYLVMEYCNGGDLSDYIRRRGR-LPEATARHFMQQLASALQFLHENNII 131 (429)
T ss_pred HHHHHHHHhcCCcceeeEEE-EEecCC---eEEEEEEeCCCCCHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 58899999999999999999 666665 68999999 89999999976654 99999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||.||||+........ ..+|++|||+|+......
T Consensus 132 HRDLKPQNiLLs~~~~~~~~---------------------------------------~~LKIADFGfAR~L~~~~--- 169 (429)
T KOG0595|consen 132 HRDLKPQNILLSTTARNDTS---------------------------------------PVLKIADFGFARFLQPGS--- 169 (429)
T ss_pred eccCCcceEEeccCCCCCCC---------------------------------------ceEEecccchhhhCCchh---
Confidence 99999999999864110000 123445565555433110
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
-....+|+|.|||||++....|+.++|+||+|+|||+
T Consensus 170 -------------------------------------------~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq 206 (429)
T KOG0595|consen 170 -------------------------------------------MAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQ 206 (429)
T ss_pred -------------------------------------------HHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHH
Confidence 0012689999999999999999999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhc-CCCCccccc-cCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004989 304 LFC---PFSTGEEKTRTMSSLRH-RVLPPQLLL-KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~-~~~p~~~~~-~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
|++ ||...... +....+.. ....+.+.. ..+...+|+..+|..+|.+|.+..+.+.|+++....
T Consensus 207 ~l~g~~Pf~a~t~~-eL~~~~~k~~~~~~~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~~~~~l~~~p 275 (429)
T KOG0595|consen 207 CLTGKPPFDAETPK-ELLLYIKKGNEIVPVLPAELSNPLRELLISLLQRNPKDRISFEDFFDHPFLAANP 275 (429)
T ss_pred HHhCCCCccccCHH-HHHHHHhccccccCchhhhccCchhhhhhHHHhcCccccCchHHhhhhhhcccCc
Confidence 999 55554443 34444443 223333333 334445999999999999999999999999988763
No 21
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.2e-35 Score=300.97 Aligned_cols=235 Identities=17% Similarity=0.222 Sum_probs=181.3
Q ss_pred CCCCCcccccccccCCCCccchh--hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCC
Q 004989 40 RNPRLLRGERFGVRGDDSNDFEL--RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRS 117 (720)
Q Consensus 40 ~~~~~~~~~r~~~~~~~~~~~~~--r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~ 117 (720)
++.+-++-+|+....+ ...| -.-||+.+|.+++|||||.+-.++.. .+...+|+||||...+|..+|..-..+
T Consensus 99 ~t~eIVALKr~kmeke---k~GFPItsLREIniLl~~~H~NIV~vkEVVvG--~~~d~iy~VMe~~EhDLksl~d~m~q~ 173 (419)
T KOG0663|consen 99 KTDEIVALKRLKMEKE---KEGFPITSLREINILLKARHPNIVEVKEVVVG--SNMDKIYIVMEYVEHDLKSLMETMKQP 173 (419)
T ss_pred CcceeEEeeecccccc---cCCCcchhHHHHHHHHhcCCCCeeeeEEEEec--cccceeeeeHHHHHhhHHHHHHhccCC
Confidence 4555566666666553 2333 33488999999999999999995543 334469999999989999999777778
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchh
Q 004989 118 VDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLD 197 (720)
Q Consensus 118 l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (720)
+...+++.++.|++.||.|||.+.|+||||||+|+|++..|.+|++|||+|+.+|.+..
T Consensus 174 F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~k--------------------- 232 (419)
T KOG0663|consen 174 FLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGILKIADFGLAREYGSPLK--------------------- 232 (419)
T ss_pred CchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCCcEEecccchhhhhcCCcc---------------------
Confidence 99999999999999999999999999999999999999999999999999987766510
Q ss_pred hhhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcc
Q 004989 198 MLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWY 277 (720)
Q Consensus 198 ~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y 277 (720)
.-+..+-|.||
T Consensus 233 ---------------------------------------------------------------------~~T~lVVTLWY 243 (419)
T KOG0663|consen 233 ---------------------------------------------------------------------PYTPLVVTLWY 243 (419)
T ss_pred ---------------------------------------------------------------------cCcceEEEeee
Confidence 01225779999
Q ss_pred cCcccccCCC-CCccccchhhhchhhhccc--cC-CCCchHHHHHHHhhc------CCCC--------------cc----
Q 004989 278 ASPEELAGAP-VSCASDIYRLGVLLFELFC--PF-STGEEKTRTMSSLRH------RVLP--------------PQ---- 329 (720)
Q Consensus 278 ~APE~l~~~~-~s~~sDIwSLGvll~eLlt--pf-~~~~~~~~~~~~l~~------~~~p--------------~~---- 329 (720)
+|||++.+.. |++++|+||+|||+.||++ |. ++..+..+....+.- .+.| ..
T Consensus 244 RaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~k~~~f~~~pyn~ 323 (419)
T KOG0663|consen 244 RAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAVKKMTFSEHPYNN 323 (419)
T ss_pred cCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccchhhccccCCCCchh
Confidence 9999999988 9999999999999999999 54 444443333332221 1111 00
Q ss_pred ----cccc-C-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004989 330 ----LLLK-F-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 330 ----~~~~-~-p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
+... . ....+|+..+|.+||.+|.||.|.|+|+||.+...
T Consensus 324 lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e~P~ 369 (419)
T KOG0663|consen 324 LRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRETPL 369 (419)
T ss_pred hhhhccccccchhHHHHHHHHhccCccccccHHHhhcccccccCCC
Confidence 1001 1 12248999999999999999999999999998643
No 22
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=5.5e-35 Score=304.14 Aligned_cols=272 Identities=15% Similarity=0.160 Sum_probs=185.8
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHH-hCCCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWL-DKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L-~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
|...|..||+.++||.++.||. .++.+. ..|++||| .||+|..++ +++++.+++..++.|+..|+.||+|||-.
T Consensus 123 Ra~tE~eIL~~lDHPFlPTLYa-~fet~~---~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHml 198 (459)
T KOG0610|consen 123 RAQTEREILSLLDHPFLPTLYA-SFETDK---YSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHML 198 (459)
T ss_pred HHHHHHHHHHhcCCCccchhhh-eeeccc---eeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhh
Confidence 6678999999999999999999 666554 67999999 999999988 56677799999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCC-CCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGS-DSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
|||.|||||+||||.++|+|.|+||.++..... +.+- ...+..+.............-|.+.......
T Consensus 199 GivYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt~~-----------~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~ 267 (459)
T KOG0610|consen 199 GIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSPTLV-----------KSSSPRSSGSQPSCRSRQPSCFSPRCLSSSK 267 (459)
T ss_pred ceeeccCCcceeEEecCCcEEeeeccccccCCCCCeee-----------ccCCCCCCCCCcccccccccccccchhcccc
Confidence 999999999999999999999999999854311 1000 0000000000000000000111100000000
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhc
Q 004989 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
... . ...... +...+... .....+....+||-.|+|||++.|...+.++|+|+|||
T Consensus 268 ~~~------------------k--~~~~~~-~~~p~~~a---ep~~~RSnSFVGThEYlAPEvI~G~GHgsAVDWWtfGI 323 (459)
T KOG0610|consen 268 KRK------------------K--KDESAS-RSLPELVA---EPTGARSNSFVGTHEYLAPEVIRGEGHGSAVDWWTFGI 323 (459)
T ss_pred ccc------------------c--cccccc-ccchhhhc---CCCCccccccccccccccceeeecCCCCchhhHHHHHH
Confidence 000 0 000000 00001100 11112334589999999999999999999999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCC----hHHHHcCcccCCCccchH
Q 004989 300 LLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK----MGELLQSEFLNEPRDSME 372 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpt----a~eiL~hp~~~~~~~~l~ 372 (720)
+|||||. ||.+.+........+.+...-|..+.......|||+++|.+||++|.. |.||.+||||++..-.+.
T Consensus 324 flYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~HpFF~gVnWaLi 403 (459)
T KOG0610|consen 324 FLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEEPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKRHPFFEGVNWALI 403 (459)
T ss_pred HHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCCCcchhHHHHHHHHHhccChhhhhccccchHHhhcCccccCCChhhe
Confidence 9999998 898887775555555443322332233345569999999999999987 999999999999865544
Q ss_pred H
Q 004989 373 E 373 (720)
Q Consensus 373 e 373 (720)
.
T Consensus 404 r 404 (459)
T KOG0610|consen 404 R 404 (459)
T ss_pred e
Confidence 3
No 23
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=1.8e-35 Score=291.76 Aligned_cols=235 Identities=14% Similarity=0.196 Sum_probs=182.5
Q ss_pred CCCCCcccccccccCCCCccchhhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCC
Q 004989 40 RNPRLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVD 119 (720)
Q Consensus 40 ~~~~~~~~~r~~~~~~~~~~~~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~ 119 (720)
.+.+.+++++|... .....-.+-..||+..|..++||||+.+.+ +|.... .+-+|+||...+|...|+.....++
T Consensus 25 ~t~~~VAIKKIkl~-~~kdGi~~talREIK~Lqel~h~nIi~LiD-~F~~~~---~l~lVfEfm~tdLe~vIkd~~i~l~ 99 (318)
T KOG0659|consen 25 ETGKRVAIKKIKLG-NAKDGINRTALREIKLLQELKHPNIIELID-VFPHKS---NLSLVFEFMPTDLEVVIKDKNIILS 99 (318)
T ss_pred CCCcEEEEEEeecc-ccccCccHHHHHHHHHHHHccCcchhhhhh-hccCCC---ceEEEEEeccccHHHHhcccccccC
Confidence 34455677776664 333333344458888999999999999999 444333 4689999999999999988888899
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhh
Q 004989 120 VYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDML 199 (720)
Q Consensus 120 ~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (720)
..+++.|+.+++.||+|||++.|+||||||.|+||+++|.+|++|||+++.+|.+...
T Consensus 100 pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~---------------------- 157 (318)
T KOG0659|consen 100 PADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRI---------------------- 157 (318)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEeecccchhccCCCCcc----------------------
Confidence 9999999999999999999999999999999999999999999999999777655210
Q ss_pred hhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccC
Q 004989 200 QRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYAS 279 (720)
Q Consensus 200 ~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~A 279 (720)
.+..+-|.||+|
T Consensus 158 --------------------------------------------------------------------~~~~V~TRWYRA 169 (318)
T KOG0659|consen 158 --------------------------------------------------------------------QTHQVVTRWYRA 169 (318)
T ss_pred --------------------------------------------------------------------cccceeeeeccC
Confidence 011356999999
Q ss_pred cccccCCC-CCccccchhhhchhhhccc--cCCCCchHHHHHHHhhc--CC--------------------CCcc-----
Q 004989 280 PEELAGAP-VSCASDIYRLGVLLFELFC--PFSTGEEKTRTMSSLRH--RV--------------------LPPQ----- 329 (720)
Q Consensus 280 PE~l~~~~-~s~~sDIwSLGvll~eLlt--pf~~~~~~~~~~~~l~~--~~--------------------~p~~----- 329 (720)
||++.|.. |+..+||||.|||+.||+- ||.+.+...+.+..+-. +. +|..
T Consensus 170 PELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~~~l 249 (318)
T KOG0659|consen 170 PELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQFPKPPLNNL 249 (318)
T ss_pred hHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHhcCCCCccccc
Confidence 99999987 9999999999999999998 87766444333332211 00 1111
Q ss_pred ccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004989 330 LLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 330 ~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
+....++..+|+..||.+||.+|+|+.|+|+|+||+....
T Consensus 250 f~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~~P~ 289 (318)
T KOG0659|consen 250 FPAASSDALDLLSKMLTYNPKKRITASQALKHPYFKSLPL 289 (318)
T ss_pred cccccHHHHHHHHhhhccCchhcccHHHHhcchhhhcCCC
Confidence 1122234459999999999999999999999999997533
No 24
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=2e-34 Score=310.91 Aligned_cols=207 Identities=19% Similarity=0.229 Sum_probs=165.7
Q ss_pred hhhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHH
Q 004989 61 ELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 61 ~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
.....+|..+|++++|||||+++| ++..... .+++|||| .+|+|.++|.+ ..+.++...+..|+.||+.|+.|||
T Consensus 83 ~~~f~~E~~il~~l~HpNIV~f~G-~~~~~~~--~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH 159 (362)
T KOG0192|consen 83 RKAFRREASLLSRLRHPNIVQFYG-ACTSPPG--SLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLH 159 (362)
T ss_pred HHHHHHHHHHHHhCCCCCeeeEEE-EEcCCCC--ceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHh
Confidence 445558889999999999999999 5555432 47999999 99999999965 4667999999999999999999999
Q ss_pred HCC-ceeccCCCCcEEEccCC-ceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCC
Q 004989 139 SQG-IVVHNVRPSCFVMSSFN-HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 216 (720)
Q Consensus 139 s~g-IvHrDLKP~NILl~~~~-~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~ 216 (720)
+++ ||||||||+|||++.++ ++||+|||+++......
T Consensus 160 ~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~----------------------------------------- 198 (362)
T KOG0192|consen 160 SEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK----------------------------------------- 198 (362)
T ss_pred cCCCeeecccChhhEEEcCCCCEEEECCCccceeecccc-----------------------------------------
Confidence 999 99999999999999997 99998888874321100
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCccccc--CCCCCccccc
Q 004989 217 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA--GAPVSCASDI 294 (720)
Q Consensus 217 ~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~--~~~~s~~sDI 294 (720)
. ..+...||+.|||||++. ...|+.++||
T Consensus 199 -----------------------------------------------~--~~~~~~GT~~wMAPEv~~~~~~~~~~K~Dv 229 (362)
T KOG0192|consen 199 -----------------------------------------------T--SMTSVAGTYRWMAPEVLRGEKSPYTEKSDV 229 (362)
T ss_pred -----------------------------------------------c--cccCCCCCccccChhhhcCCCCcCCccchh
Confidence 0 001146899999999999 5579999999
Q ss_pred hhhhchhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 295 YRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 295 wSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
||||++||||+| ||........+.....+...|+......+....|+.+||+.||..||+..+|+.
T Consensus 230 ySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~~~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~ 298 (362)
T KOG0192|consen 230 YSFGIVLWELLTGEIPFEDLAPVQVASAVVVGGLRPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVS 298 (362)
T ss_pred hhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHH
Confidence 999999999999 898887743333333344444333334455569999999999999999999874
No 25
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1e-34 Score=305.81 Aligned_cols=218 Identities=19% Similarity=0.233 Sum_probs=169.7
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+-.+|+.||+++.|||||+|++ +. ++.....+|||+|| ..|.+. |.......+++.+++.|+++++.||+|||.||
T Consensus 154 kv~~EIailKkl~H~nVV~LiE-vL-DDP~s~~~YlVley~s~G~v~-w~p~d~~els~~~Ar~ylrDvv~GLEYLH~Qg 230 (576)
T KOG0585|consen 154 KVRREIAILKKLHHPNVVKLIE-VL-DDPESDKLYLVLEYCSKGEVK-WCPPDKPELSEQQARKYLRDVVLGLEYLHYQG 230 (576)
T ss_pred HHHHHHHHHHhcCCcCeeEEEE-ee-cCcccCceEEEEEeccCCccc-cCCCCcccccHHHHHHHHHHHHHHHHHHHhcC
Confidence 3348999999999999999999 44 55556689999999 666653 34223333899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
||||||||+|+||+++|+|||.|||.+..+.....+ ++
T Consensus 231 iiHRDIKPsNLLl~~~g~VKIsDFGVs~~~~~~~~~-------------------------------~~----------- 268 (576)
T KOG0585|consen 231 IIHRDIKPSNLLLSSDGTVKISDFGVSNEFPQGSDE-------------------------------GS----------- 268 (576)
T ss_pred eeccccchhheEEcCCCcEEeeccceeeecccCCcc-------------------------------cc-----------
Confidence 999999999999999999999999998543111000 00
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC----CCccccchhh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP----VSCASDIYRL 297 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~----~s~~sDIwSL 297 (720)
. . .....+|||.|+|||.+.+.. .+.+.|||||
T Consensus 269 ---d-------------------~---------------------~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWal 305 (576)
T KOG0585|consen 269 ---D-------------------D---------------------QLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWAL 305 (576)
T ss_pred ---H-------------------H---------------------HHhhcCCCccccchHhhcCCCCccccchhhhhhhh
Confidence 0 0 000148999999999998733 4789999999
Q ss_pred hchhhhccc---cCCCCchHHHHHHHhhc-CCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004989 298 GVLLFELFC---PFSTGEEKTRTMSSLRH-RVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 298 Gvll~eLlt---pf~~~~~~~~~~~~l~~-~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
||+||-|+. ||...... ..+..|.+ ...-|......+...+||++||.+||.+|.++.+|..|||.....+
T Consensus 306 GVTLYCllfG~~PF~~~~~~-~l~~KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~g~ 380 (576)
T KOG0585|consen 306 GVTLYCLLFGQLPFFDDFEL-ELFDKIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRDGD 380 (576)
T ss_pred hhhHHHhhhccCCcccchHH-HHHHHHhcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheecceeccCCC
Confidence 999999998 88887665 44444444 3334444455667779999999999999999999999999998733
No 26
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=2.2e-34 Score=331.23 Aligned_cols=200 Identities=26% Similarity=0.401 Sum_probs=156.7
Q ss_pred cEEEEEecCCCCHHHHH-hCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCC
Q 004989 95 PFVHAIEWGDVSLRQWL-DKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGS 173 (720)
Q Consensus 95 ~~~lv~E~~ggsL~~~L-~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~ 173 (720)
.+||-|||+.-+|.+++ +.+...-.....+++|+||++||.|+|++|||||||||.||+|++++.|||.|||++...-.
T Consensus 670 ~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~ 749 (1351)
T KOG1035|consen 670 ILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHDQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKE 749 (1351)
T ss_pred EEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHhCceeeccCCcceeEEcCCCCeeecccccchhhhh
Confidence 36999999554555555 43332115789999999999999999999999999999999999999999999998854210
Q ss_pred CCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccc
Q 004989 174 DSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVN 253 (720)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~ 253 (720)
. .+++.+... ....
T Consensus 750 ~---------------------------------~~~~d~~~~-----~~~~---------------------------- 763 (1351)
T KOG1035|consen 750 N---------------------------------LESIDQDLS-----FSTN---------------------------- 763 (1351)
T ss_pred h---------------------------------hhhHhhccC-----cccc----------------------------
Confidence 0 000000000 0000
Q ss_pred hhhhhcccCCCCccccccccCCcccCcccccCCC---CCccccchhhhchhhhccccCCCCchHHHHHHHhhcCCCCcc-
Q 004989 254 VEQVEEKKQPFPMKQILLMETNWYASPEELAGAP---VSCASDIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRVLPPQ- 329 (720)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~---~s~~sDIwSLGvll~eLltpf~~~~~~~~~~~~l~~~~~p~~- 329 (720)
.........+..+||.-|+|||++.+.. |+.++|||||||+||||+.||.+..+...++..++.+.+|..
T Consensus 764 ------~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~yPF~TsMERa~iL~~LR~g~iP~~~ 837 (1351)
T KOG1035|consen 764 ------RAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEMLYPFGTSMERASILTNLRKGSIPEPA 837 (1351)
T ss_pred ------ccCCCCcccccccceeeeecHHHhcccccccccchhhhHHHHHHHHHHhccCCchHHHHHHHHhcccCCCCCCc
Confidence 0000011224479999999999997765 999999999999999999999999999999999999999888
Q ss_pred --ccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCC
Q 004989 330 --LLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 366 (720)
Q Consensus 330 --~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~ 366 (720)
+.+..|.++.+|.|||..||++||||.|+|++.||..
T Consensus 838 ~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~s~llpp 876 (1351)
T KOG1035|consen 838 DFFDPEHPEEASLIRWLLSHDPSKRPTATELLNSELLPP 876 (1351)
T ss_pred ccccccchHHHHHHHHHhcCCCccCCCHHHHhhccCCCc
Confidence 7788899999999999999999999999999999986
No 27
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6e-35 Score=288.10 Aligned_cols=231 Identities=17% Similarity=0.172 Sum_probs=176.8
Q ss_pred CCCCcccccccccCCCCcc---chhhch--hhhhhccc-CCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC
Q 004989 41 NPRLLRGERFGVRGDDSND---FELRKH--SDGVELTH-GDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK 113 (720)
Q Consensus 41 ~~~~~~~~r~~~~~~~~~~---~~~r~~--~e~~~L~~-l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~ 113 (720)
+....+++.+...+.+... ...|++ +|..||.+ ..||+|+.+.+ +|+.+. .+++|+|+ ..|.|.++|..
T Consensus 41 t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D-~yes~s---F~FlVFdl~prGELFDyLts 116 (411)
T KOG0599|consen 41 TGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQD-VYESDA---FVFLVFDLMPRGELFDYLTS 116 (411)
T ss_pred cccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeee-eccCcc---hhhhhhhhcccchHHHHhhh
Confidence 3444555555555444332 333444 67778888 67999999999 777765 56999999 89999999954
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCC
Q 004989 114 PKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSP 193 (720)
Q Consensus 114 ~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~ 193 (720)
. -.+++.+.+.|++||++|+.|||.++||||||||+|||++++.+++|.|||+++.....+
T Consensus 117 ~-VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~~i~isDFGFa~~l~~Ge------------------ 177 (411)
T KOG0599|consen 117 K-VTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNMNIKISDFGFACQLEPGE------------------ 177 (411)
T ss_pred h-eeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccccceEEeccceeeccCCch------------------
Confidence 4 349999999999999999999999999999999999999999999999999885432110
Q ss_pred CchhhhhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCcccccccc
Q 004989 194 LPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLME 273 (720)
Q Consensus 194 ~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~G 273 (720)
+....+|
T Consensus 178 -------------------------------------------------------------------------kLrelCG 184 (411)
T KOG0599|consen 178 -------------------------------------------------------------------------KLRELCG 184 (411)
T ss_pred -------------------------------------------------------------------------hHHHhcC
Confidence 1123689
Q ss_pred CCcccCcccccC------CCCCccccchhhhchhhhccccCCCCchHH--HHHHHhhcCCC---CccccccCchHHHHHH
Q 004989 274 TNWYASPEELAG------APVSCASDIYRLGVLLFELFCPFSTGEEKT--RTMSSLRHRVL---PPQLLLKFPKEASFCL 342 (720)
Q Consensus 274 T~~Y~APE~l~~------~~~s~~sDIwSLGvll~eLltpf~~~~~~~--~~~~~l~~~~~---p~~~~~~~p~~~~Li~ 342 (720)
||+|+|||.+.. ..|+..+|+|++|||||.||.+.+++-... .+...|..+.+ .|.+........+||.
T Consensus 185 TPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGkyqF~speWadis~~~KdLIs 264 (411)
T KOG0599|consen 185 TPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKYQFRSPEWADISATVKDLIS 264 (411)
T ss_pred CCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhcccccCCcchhhccccHHHHHH
Confidence 999999999843 238999999999999999999555543322 22333444433 3444444455569999
Q ss_pred HcCCCCCCCCCChHHHHcCcccCCC
Q 004989 343 WLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 343 ~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
+||+.||.+|.|++|+|+||||.+.
T Consensus 265 rlLqVdp~~Ritake~LaHpff~q~ 289 (411)
T KOG0599|consen 265 RLLQVDPTKRITAKEALAHPFFIQI 289 (411)
T ss_pred HHHeeCchhcccHHHHhcChHHHHH
Confidence 9999999999999999999999764
No 28
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=5.7e-34 Score=294.29 Aligned_cols=239 Identities=18% Similarity=0.237 Sum_probs=177.0
Q ss_pred CCcccccccccCCCCccchhhchhhhhhcccCCCCC-ceecccceeecCC--CCCcEEEEEecCCCCHHHHHhCCC---C
Q 004989 43 RLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLR-NQGGLSGVCENEA--AIDPFVHAIEWGDVSLRQWLDKPK---R 116 (720)
Q Consensus 43 ~~~~~~r~~~~~~~~~~~~~r~~~e~~~L~~l~Hpn-IV~l~~~~~~~~~--~~~~~~lv~E~~ggsL~~~L~~~~---~ 116 (720)
..++.+++....+. +..-.-..||+.+|.+++|+| ||++++++..... ....+++|+||...+|..++.... .
T Consensus 37 ~~VALKkirl~~~~-EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~l~lvfe~~d~DL~~ymd~~~~~~~ 115 (323)
T KOG0594|consen 37 KFVALKKIRLEFEE-EGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGKLYLVFEFLDRDLKKYMDSLPKKPQ 115 (323)
T ss_pred CEEEEEEEeccccc-cCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccceEEEEEEeecccHHHHHHhcccccc
Confidence 34555555554442 111112337788999999999 9999994443331 233579999999999999996544 3
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCch
Q 004989 117 SVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPL 196 (720)
Q Consensus 117 ~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 196 (720)
.++...++.+++||+.||+|||++||+||||||.||||+++|.+||+|||+|+.++.+.-
T Consensus 116 g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAra~~ip~~-------------------- 175 (323)
T KOG0594|consen 116 GLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSGVLKLADFGLARAFSIPMR-------------------- 175 (323)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCCcEeeeccchHHHhcCCcc--------------------
Confidence 588899999999999999999999999999999999999999999999998865433310
Q ss_pred hhhhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCc
Q 004989 197 DMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNW 276 (720)
Q Consensus 197 ~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~ 276 (720)
.-+..++|.|
T Consensus 176 ----------------------------------------------------------------------~yt~evvTlW 185 (323)
T KOG0594|consen 176 ----------------------------------------------------------------------TYTPEVVTLW 185 (323)
T ss_pred ----------------------------------------------------------------------cccccEEEee
Confidence 0122578999
Q ss_pred ccCcccccCCC-CCccccchhhhchhhhccc--c-CCCCchHHHHHHHhhcCCCC-------------------cc----
Q 004989 277 YASPEELAGAP-VSCASDIYRLGVLLFELFC--P-FSTGEEKTRTMSSLRHRVLP-------------------PQ---- 329 (720)
Q Consensus 277 Y~APE~l~~~~-~s~~sDIwSLGvll~eLlt--p-f~~~~~~~~~~~~l~~~~~p-------------------~~---- 329 (720)
|+|||++.|.. |++.+||||+|||++||++ | |++..+........+.--.| ..
T Consensus 186 YRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~ 265 (323)
T KOG0594|consen 186 YRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPK 265 (323)
T ss_pred ccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCccccccccccCcCCCCcc
Confidence 99999999985 9999999999999999999 4 44544443333333211111 00
Q ss_pred -c----cccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCccchH
Q 004989 330 -L----LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSME 372 (720)
Q Consensus 330 -~----~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~l~ 372 (720)
+ ....+...+++.+||+++|.+|.|+..+|.||||........
T Consensus 266 ~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~~~~~~ 313 (323)
T KOG0594|consen 266 DLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSELPEKSS 313 (323)
T ss_pred chHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhcccccchh
Confidence 0 011134459999999999999999999999999998855433
No 29
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-34 Score=307.57 Aligned_cols=242 Identities=17% Similarity=0.164 Sum_probs=198.0
Q ss_pred cccccccccC--CCCCCcccccccccCCCCccchhhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCH
Q 004989 30 RALNISGVSD--RNPRLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSL 107 (720)
Q Consensus 30 ~~~~~~~~~~--~~~~~~~~~r~~~~~~~~~~~~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL 107 (720)
+-||+..|.. +|...+++++..++|..+....-....|+.+|.+++|||+|.+-+ +|..+. ..|+||||+-|+-
T Consensus 37 GSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkg-CyLre~---TaWLVMEYClGSA 112 (948)
T KOG0577|consen 37 GSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKG-CYLREH---TAWLVMEYCLGSA 112 (948)
T ss_pred CccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccc-eeeccc---hHHHHHHHHhccH
Confidence 3444444433 778889999999999988877777778899999999999999999 665553 4699999988899
Q ss_pred HHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccc
Q 004989 108 RQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMET 187 (720)
Q Consensus 108 ~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~ 187 (720)
.|+|.-...++.+.++..|..+.+.||.|||+.+.||||||..|||+++.|.|||.|||.+.....
T Consensus 113 sDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~P-------------- 178 (948)
T KOG0577|consen 113 SDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPGLVKLADFGSASIMAP-------------- 178 (948)
T ss_pred HHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCCeeeeccccchhhcCc--------------
Confidence 998865666799999999999999999999999999999999999999999999999998733210
Q ss_pred cCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCcc
Q 004989 188 KDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMK 267 (720)
Q Consensus 188 ~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~ 267 (720)
T Consensus 179 -------------------------------------------------------------------------------- 178 (948)
T KOG0577|consen 179 -------------------------------------------------------------------------------- 178 (948)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccccCCcccCcccccC---CCCCccccchhhhchhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHH-HH
Q 004989 268 QILLMETNWYASPEELAG---APVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEA-SF 340 (720)
Q Consensus 268 ~~~~~GT~~Y~APE~l~~---~~~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~-~L 340 (720)
...++|||+|||||++.. +.|+-++||||||+++.||.- |++..+... +...|.....|.-..+.|++.. .|
T Consensus 179 AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMS-ALYHIAQNesPtLqs~eWS~~F~~F 257 (948)
T KOG0577|consen 179 ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-ALYHIAQNESPTLQSNEWSDYFRNF 257 (948)
T ss_pred hhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHH-HHHHHHhcCCCCCCCchhHHHHHHH
Confidence 012689999999999853 349999999999999999998 777666553 4444555555544556777665 99
Q ss_pred HHHcCCCCCCCCCChHHHHcCcccCCCccc
Q 004989 341 CLWLLHPEPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 341 i~~~L~~dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
+..||++-|.+|||.+++|.|+|+...+.+
T Consensus 258 vd~CLqKipqeRptse~ll~H~fv~R~Rp~ 287 (948)
T KOG0577|consen 258 VDSCLQKIPQERPTSEELLKHRFVLRERPP 287 (948)
T ss_pred HHHHHhhCcccCCcHHHHhhcchhccCCCc
Confidence 999999999999999999999999877443
No 30
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.7e-34 Score=299.27 Aligned_cols=234 Identities=15% Similarity=0.164 Sum_probs=177.5
Q ss_pred CCcccccccccCCCCccchhhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCH
Q 004989 43 RLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDV 120 (720)
Q Consensus 43 ~~~~~~r~~~~~~~~~~~~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~ 120 (720)
..++++++.+-.-...-..+| +|...++.++|||||+++. .|..+. .+|+||.| .+|++.++|+. ....++|
T Consensus 52 e~VAIK~inLEkc~~~ld~l~--kE~~~msl~~HPNIv~~~~-sFvv~~---~LWvVmpfMa~GS~ldIik~~~~~Gl~E 125 (516)
T KOG0582|consen 52 EVVAIKIINLEKCNNDLDALR--KEVQTMSLIDHPNIVTYHC-SFVVDS---ELWVVMPFMAGGSLLDIIKTYYPDGLEE 125 (516)
T ss_pred CEEEEEEeehhhhhhhHHHHH--HHHHHhhhcCCCCcceEEE-EEEecc---eeEEeehhhcCCcHHHHHHHHccccccH
Confidence 556666666654443323334 4566888899999999999 554444 47999999 99999999943 3344999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhh
Q 004989 121 YECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQ 200 (720)
Q Consensus 121 ~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (720)
..+..|+++++.||+|||.+|-||||||+.||||+.+|.|||.|||.....
T Consensus 126 ~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l----------------------------- 176 (516)
T KOG0582|consen 126 ASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKLADFGVSASL----------------------------- 176 (516)
T ss_pred HHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEEEcCceeeeee-----------------------------
Confidence 999999999999999999999999999999999999999999999876221
Q ss_pred hhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCc
Q 004989 201 RRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASP 280 (720)
Q Consensus 201 ~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~AP 280 (720)
.|-|. + +. .+....+||++||||
T Consensus 177 -------~~~G~-R-----------------------------------------------~~--~rf~tfvgtp~wmAP 199 (516)
T KOG0582|consen 177 -------FDSGD-R-----------------------------------------------QV--TRFNTFVGTPCWMAP 199 (516)
T ss_pred -------cccCc-e-----------------------------------------------ee--EeeccccCcccccCh
Confidence 11110 0 00 000125899999999
Q ss_pred ccccCCC--CCccccchhhhchhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCc---------hHHHHHHHcCC
Q 004989 281 EELAGAP--VSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP---------KEASFCLWLLH 346 (720)
Q Consensus 281 E~l~~~~--~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p---------~~~~Li~~~L~ 346 (720)
|++...- |++++||||||++..||.+ ||....+....+..+.+..+.+. ....+ ....++..||.
T Consensus 200 Evl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~-t~~~~~d~~k~~~ksf~e~i~~CL~ 278 (516)
T KOG0582|consen 200 EVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLL-TSGLDKDEDKKFSKSFREMIALCLV 278 (516)
T ss_pred HHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcc-cccCChHHhhhhcHHHHHHHHHHhh
Confidence 9975543 9999999999999999999 78777776666666665433222 22112 22389999999
Q ss_pred CCCCCCCChHHHHcCcccCCCcc
Q 004989 347 PEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 347 ~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
.||.+||||.++|.|+||+....
T Consensus 279 kDP~kRptAskLlkh~FFk~~k~ 301 (516)
T KOG0582|consen 279 KDPSKRPTASKLLKHAFFKKAKS 301 (516)
T ss_pred cCcccCCCHHHHhccHHHhhccc
Confidence 99999999999999999998744
No 31
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=2.5e-34 Score=307.35 Aligned_cols=206 Identities=20% Similarity=0.265 Sum_probs=168.3
Q ss_pred hhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceec
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 145 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHr 145 (720)
+|..|+..++|||||.+++ +|+... ++|+|.||.-|+|..+|...+ .++|+.++.|..|++.||.|||+.+|+||
T Consensus 50 ~ev~i~r~lkHpniv~m~e-sfEt~~---~~~vVte~a~g~L~~il~~d~-~lpEe~v~~~a~~LVsaL~yLhs~rilhr 124 (808)
T KOG0597|consen 50 QEVRILRSLKHPNIVEMLE-SFETSA---HLWVVTEYAVGDLFTILEQDG-KLPEEQVRAIAYDLVSALYYLHSNRILHR 124 (808)
T ss_pred HHHHHHHhcCCcchhhHHH-hhcccc---eEEEEehhhhhhHHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHhcCcccc
Confidence 6777999999999999999 887775 679999996669999996554 49999999999999999999999999999
Q ss_pred cCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccccc
Q 004989 146 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 225 (720)
Q Consensus 146 DLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~ 225 (720)
|+||.|||+...|.+|++|||+++..+...
T Consensus 125 d~kPqniLl~~~~~~KlcdFg~Ar~m~~~t-------------------------------------------------- 154 (808)
T KOG0597|consen 125 DMKPQNILLEKGGTLKLCDFGLARAMSTNT-------------------------------------------------- 154 (808)
T ss_pred cCCcceeeecCCCceeechhhhhhhcccCc--------------------------------------------------
Confidence 999999999999999998887774322110
Q ss_pred ccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhcc
Q 004989 226 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 305 (720)
Q Consensus 226 ~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLl 305 (720)
.-.+...|||.|||||++.+.+|+..+|+||||||+|||+
T Consensus 155 ----------------------------------------~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~ 194 (808)
T KOG0597|consen 155 ----------------------------------------SVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELY 194 (808)
T ss_pred ----------------------------------------eeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHh
Confidence 0002257999999999999999999999999999999999
Q ss_pred c---cCCCCchHHHHHHHhhc-CCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004989 306 C---PFSTGEEKTRTMSSLRH-RVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 306 t---pf~~~~~~~~~~~~l~~-~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
+ ||....-. .....|.+ ...||. ...+....|+..+|.+||.+|.|..+++.|||+++...
T Consensus 195 ~G~PPF~a~si~-~Lv~~I~~d~v~~p~--~~S~~f~nfl~gLL~kdP~~RltW~~Ll~HpF~k~~~~ 259 (808)
T KOG0597|consen 195 VGQPPFYARSIT-QLVKSILKDPVKPPS--TASSSFVNFLQGLLIKDPAQRLTWTDLLGHPFWKGKIN 259 (808)
T ss_pred cCCCCchHHHHH-HHHHHHhcCCCCCcc--cccHHHHHHHHHHhhcChhhcccHHHHhcChHHhhhhh
Confidence 9 55543333 33333333 333333 44566679999999999999999999999999987643
No 32
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=5.2e-33 Score=302.38 Aligned_cols=241 Identities=18% Similarity=0.200 Sum_probs=181.7
Q ss_pred CcccccccccC------CC-CCCcccccccccCCCCccchhhchhhhhhcccCC-CCCceecccceeecCCCCCcEEEEE
Q 004989 29 SRALNISGVSD------RN-PRLLRGERFGVRGDDSNDFELRKHSDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAI 100 (720)
Q Consensus 29 ~~~~~~~~~~~------~~-~~~~~~~r~~~~~~~~~~~~~r~~~e~~~L~~l~-HpnIV~l~~~~~~~~~~~~~~~lv~ 100 (720)
++.+|.+.++. .. -+..+.+.+.-+............+|..+|.++. |||||.+++ +|++.. .+++||
T Consensus 40 ~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~-~~e~~~---~~~lvm 115 (382)
T KOG0032|consen 40 GRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKD-AFEDPD---SVYLVM 115 (382)
T ss_pred hhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEE-EEEcCC---eEEEEE
Confidence 45566655554 22 2333333333333333333334458888999999 999999999 777765 679999
Q ss_pred ec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccC----CceEEeecCcccCCCCCC
Q 004989 101 EW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSF----NHVSFIESASCSDSGSDS 175 (720)
Q Consensus 101 E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~----~~vkliDfg~a~~~g~~~ 175 (720)
|+ .||.|.+.|.+. . +++..+..+++||+.++.|||+.||+||||||+|||+... +.+|++|||++.......
T Consensus 116 EL~~GGeLfd~i~~~-~-~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~~~ 193 (382)
T KOG0032|consen 116 ELCEGGELFDRIVKK-H-YSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKPGE 193 (382)
T ss_pred EecCCchHHHHHHHc-c-CCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEccCCc
Confidence 99 999999999554 3 9999999999999999999999999999999999999733 479998888874332110
Q ss_pred cccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchh
Q 004989 176 HEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVE 255 (720)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~ 255 (720)
T Consensus 194 -------------------------------------------------------------------------------- 193 (382)
T KOG0032|consen 194 -------------------------------------------------------------------------------- 193 (382)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhccc---cCCCCchHHHHHHHhhcCC--CCcc-
Q 004989 256 QVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRV--LPPQ- 329 (720)
Q Consensus 256 ~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~--~p~~- 329 (720)
.....+||+.|+|||++.+.+|+..+||||+||++|.|++ ||.......... .+..+. ++..
T Consensus 194 -----------~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~-~i~~~~~~f~~~~ 261 (382)
T KOG0032|consen 194 -----------RLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFL-AILRGDFDFTSEP 261 (382)
T ss_pred -----------eEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHH-HHHcCCCCCCCCC
Confidence 0012689999999999999999999999999999999999 666655443333 333332 3333
Q ss_pred ccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 330 LLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 330 ~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
+...+....+|+..||..||..|+|+.++|+|||++..
T Consensus 262 w~~is~~akd~i~~ll~~dp~~R~ta~~~L~HpWi~~~ 299 (382)
T KOG0032|consen 262 WDDISESAKDFIRKLLEFDPRKRLTAAQALQHPWIKSI 299 (382)
T ss_pred ccccCHHHHHHHHHhcccCcccCCCHHHHhcCccccCC
Confidence 33344445599999999999999999999999999986
No 33
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=9.1e-34 Score=304.62 Aligned_cols=211 Identities=18% Similarity=0.197 Sum_probs=173.6
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHh-CCCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLD-KPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~-~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
-.+.|..+++++.|||||.+++.|.+++. .++|||+| .||+|.+.|. +.+..+++..+..||.||+.||.|||+.
T Consensus 49 ~A~~E~~lis~~~hP~iv~y~ds~~~~~~---~l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~ 125 (426)
T KOG0589|consen 49 SAIQEMDLLSKLLHPNIVEYKDSFEEDGQ---LLCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHEN 125 (426)
T ss_pred HHHHHHHHHHhccCCCeeeeccchhcCCc---eEEEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhh
Confidence 45588999999999999999996666653 48999999 9999999993 3446689999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
.|+|||||+.||+++.++.|+|.|||+++..+.+. +|
T Consensus 126 ~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~---------------------------------~~---------- 162 (426)
T KOG0589|consen 126 RVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPED---------------------------------SL---------- 162 (426)
T ss_pred hhhcccchhhhhhccccCceeecchhhhhhcCCch---------------------------------hh----------
Confidence 99999999999999999999997777775543320 00
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhch
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
....+|||.||+||++.+.+|+.++|||||||+
T Consensus 163 -----------------------------------------------a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~ 195 (426)
T KOG0589|consen 163 -----------------------------------------------ASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCC 195 (426)
T ss_pred -----------------------------------------------hheecCCCcccCHHHhCCCCCCccCcchhhcch
Confidence 012689999999999999999999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
+|||++ +|...+...-.. .+......|...........++..||..+|..||++.++|.+|.+...
T Consensus 196 ~yEm~~lk~aF~a~~m~~Li~-ki~~~~~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~P~l~~~ 264 (426)
T KOG0589|consen 196 LYEMCTLKPAFKASNMSELIL-KINRGLYSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRRPHLLRY 264 (426)
T ss_pred HHHHHhcccccCccchHHHHH-HHhhccCCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhChhhhhH
Confidence 999999 677765554444 444444555444455566699999999999999999999999877655
No 34
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=9.9e-34 Score=300.29 Aligned_cols=203 Identities=16% Similarity=0.161 Sum_probs=162.3
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..+|.+++||||+++++ ++.+.. .+|++||| .+++|.+++.+.+ .+++..++.++.||+.||.|||++||
T Consensus 48 ~~~E~~~l~~l~hp~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i 122 (291)
T cd05612 48 VHNEKRVLKEVSHPFIIRLFW-TEHDQR---FLYMLMEYVPGGELFSYLRNSG-RFSNSTGLFYASEIVCALEYLHSKEI 122 (291)
T ss_pred HHHHHHHHHhCCCCcHhhhHh-hhccCC---eEEEEEeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 446778999999999999999 444432 68999999 8999999995543 58999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.+||+|||++......
T Consensus 123 ~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~------------------------------------------------ 154 (291)
T cd05612 123 VYRDLKPENILLDKEGHIKLTDFGFAKKLRDR------------------------------------------------ 154 (291)
T ss_pred eecCCCHHHeEECCCCCEEEEecCcchhccCC------------------------------------------------
Confidence 99999999999999999999999887321000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
.....||+.|+|||++.+..++.++|||||||++|
T Consensus 155 ---------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ 189 (291)
T cd05612 155 ---------------------------------------------TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIY 189 (291)
T ss_pred ---------------------------------------------cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHH
Confidence 00136799999999999888999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCCCccccc-cCchHHHHHHHcCCCCCCCCCC-----hHHHHcCcccCCC
Q 004989 303 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEP 367 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~-~~p~~~~Li~~~L~~dP~~Rpt-----a~eiL~hp~~~~~ 367 (720)
||++ ||...... ..+..+..... .++. ..+...+||.+||..||.+||+ +.++++||||...
T Consensus 190 ~l~~g~~pf~~~~~~-~~~~~i~~~~~--~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~ 260 (291)
T cd05612 190 EMLVGYPPFFDDNPF-GIYEKILAGKL--EFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFKSV 260 (291)
T ss_pred HHHhCCCCCCCCCHH-HHHHHHHhCCc--CCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCccccCC
Confidence 9999 66655443 33333333221 1112 2345569999999999999995 9999999999865
No 35
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=1.2e-33 Score=305.06 Aligned_cols=204 Identities=16% Similarity=0.179 Sum_probs=164.0
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++||||+++++ .+.++. .+|++||| .|++|.+++.+.+ .+++..++.++.||+.||.|||++|
T Consensus 64 ~~~~E~~~l~~l~hp~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~ 138 (329)
T PTZ00263 64 HVAQEKSILMELSHPFIVNMMC-SFQDEN---RVYFLLEFVVGGELFTHLRKAG-RFPNDVAKFYHAELVLAFEYLHSKD 138 (329)
T ss_pred HHHHHHHHHHhCCCCCCCcEEE-EEEcCC---EEEEEEcCCCCChHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3447888999999999999999 555443 57999999 8999999996544 4899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||++......
T Consensus 139 ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~----------------------------------------------- 171 (329)
T PTZ00263 139 IIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDR----------------------------------------------- 171 (329)
T ss_pred eeecCCCHHHEEECCCCCEEEeeccCceEcCCC-----------------------------------------------
Confidence 999999999999999999999999887321100
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
.....||+.|+|||++.+..++.++|||||||++
T Consensus 172 ----------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il 205 (329)
T PTZ00263 172 ----------------------------------------------TFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLL 205 (329)
T ss_pred ----------------------------------------------cceecCChhhcCHHHHcCCCCCCcceeechHHHH
Confidence 0013689999999999998899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccc-cCchHHHHHHHcCCCCCCCCCC-----hHHHHcCcccCCC
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~-~~p~~~~Li~~~L~~dP~~Rpt-----a~eiL~hp~~~~~ 367 (720)
|||++ ||...... ..+..+....++ ++. ..+...+||.+||+.||.+||+ +.+++.||||...
T Consensus 206 ~elltg~~pf~~~~~~-~~~~~i~~~~~~--~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp~f~~~ 277 (329)
T PTZ00263 206 YEFIAGYPPFFDDTPF-RIYEKILAGRLK--FPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYFHGA 277 (329)
T ss_pred HHHHcCCCCCCCCCHH-HHHHHHhcCCcC--CCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCccCCC
Confidence 99999 66554433 344444443322 112 2234569999999999999986 7999999999874
No 36
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-34 Score=314.44 Aligned_cols=221 Identities=19% Similarity=0.271 Sum_probs=177.7
Q ss_pred CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEE
Q 004989 75 DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFV 153 (720)
Q Consensus 75 ~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NIL 153 (720)
+||.++++|. +|+... ++|+|||| .||++..++ ....+++..++.|+..|+.||.|||++|||+||||.+|||
T Consensus 427 ~HPFL~~L~~-~fQT~~---~l~fvmey~~Ggdm~~~~--~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiL 500 (694)
T KOG0694|consen 427 RHPFLVNLFS-CFQTKE---HLFFVMEYVAGGDLMHHI--HTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLL 500 (694)
T ss_pred cCCeEeeccc-ccccCC---eEEEEEEecCCCcEEEEE--ecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheE
Confidence 6999999999 776665 68999999 999965544 2234999999999999999999999999999999999999
Q ss_pred EccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCCCccc
Q 004989 154 MSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYG 233 (720)
Q Consensus 154 l~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~ 233 (720)
|+..|++||+|||+|+.--.. ++
T Consensus 501 LD~eGh~kiADFGlcKe~m~~---------------------------------g~------------------------ 523 (694)
T KOG0694|consen 501 LDTEGHVKIADFGLCKEGMGQ---------------------------------GD------------------------ 523 (694)
T ss_pred EcccCcEEecccccccccCCC---------------------------------CC------------------------
Confidence 999999999999999531000 00
Q ss_pred cccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhccc---cCCC
Q 004989 234 THVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFST 310 (720)
Q Consensus 234 ~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt---pf~~ 310 (720)
+..+.+|||.|||||++.+..|+.++|+|||||+|||||. ||.+
T Consensus 524 ---------------------------------~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~g 570 (694)
T KOG0694|consen 524 ---------------------------------RTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPG 570 (694)
T ss_pred ---------------------------------ccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCC
Confidence 1122699999999999999999999999999999999999 8988
Q ss_pred CchHHHHHHHhhcCCCCccccccCchH-HHHHHHcCCCCCCCCCC-----hHHHHcCcccCCC-ccchHHHHHHHHHhhh
Q 004989 311 GEEKTRTMSSLRHRVLPPQLLLKFPKE-ASFCLWLLHPEPSGRPK-----MGELLQSEFLNEP-RDSMEEREAAIELREQ 383 (720)
Q Consensus 311 ~~~~~~~~~~l~~~~~p~~~~~~~p~~-~~Li~~~L~~dP~~Rpt-----a~eiL~hp~~~~~-~~~l~e~~~~~~~~e~ 383 (720)
.++....-..+....+.|.+ .+.+ .+++.++|..+|++|.. +++|.+||||+.. ++.++.+..++++.+.
T Consensus 571 ddEee~FdsI~~d~~~yP~~---ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~hpFFr~i~w~~L~~r~i~PPf~P~ 647 (694)
T KOG0694|consen 571 DDEEEVFDSIVNDEVRYPRF---LSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKHPFFRSIDWDDLLNRRIKPPFVPT 647 (694)
T ss_pred CCHHHHHHHHhcCCCCCCCc---ccHHHHHHHHHHhccCcccccCCCCCCchhhhhCCccccCCHHHHhhccCCCCCCcc
Confidence 77764433444334443433 2444 49999999999999973 6899999999987 6778888888888887
Q ss_pred hhhHHHHHHHH
Q 004989 384 IDEEELLLEFL 394 (720)
Q Consensus 384 ~~~~e~L~~fL 394 (720)
+...+....|-
T Consensus 648 i~~~~D~snFd 658 (694)
T KOG0694|consen 648 IKGPEDVSNFD 658 (694)
T ss_pred cCChhhhcccc
Confidence 77655555443
No 37
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=2.4e-33 Score=302.03 Aligned_cols=207 Identities=18% Similarity=0.257 Sum_probs=163.9
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++||||+++++ .+.... .+|+|||| .|++|.+++... ..+++..++.++.||+.||+|||++|
T Consensus 41 ~~~~e~~~l~~l~hp~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~ 115 (323)
T cd05571 41 HTLTESRVLQNTRHPFLTALKY-SFQTHD---RLCFVMEYANGGELFFHLSRE-RVFSEDRARFYGAEIVSALGYLHSCD 115 (323)
T ss_pred HHHHHHHHHHhCCCCCCCCEEE-EEEcCC---EEEEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 4447788999999999999999 555443 67999999 899999999554 35899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||++....... .
T Consensus 116 ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~---------------------------------~------------ 150 (323)
T cd05571 116 VVYRDLKLENLMLDKDGHIKITDFGLCKEGISDG---------------------------------A------------ 150 (323)
T ss_pred eEeCCCCHHHEEECCCCCEEEeeCCCCcccccCC---------------------------------C------------
Confidence 9999999999999999999999999873210000 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
.....+||+.|+|||++.+..++.++|||||||++
T Consensus 151 ---------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il 185 (323)
T cd05571 151 ---------------------------------------------TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVM 185 (323)
T ss_pred ---------------------------------------------cccceecCccccChhhhcCCCCCccccCcccchhh
Confidence 00114689999999999998899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccc-cCchHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~-~~p~~~~Li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~ 367 (720)
|||++ ||...... .....+..... .++. ..+...+||.+||+.||++|| ++.++++||||...
T Consensus 186 ~elltg~~Pf~~~~~~-~~~~~~~~~~~--~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h~~f~~~ 257 (323)
T cd05571 186 YEMMCGRLPFYNQDHE-KLFELILMEEI--RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRFFASI 257 (323)
T ss_pred hhhhcCCCCCCCCCHH-HHHHHHHcCCC--CCCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence 99999 66554433 23333332211 1222 234556999999999999999 89999999999885
No 38
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=2.9e-33 Score=299.79 Aligned_cols=207 Identities=17% Similarity=0.248 Sum_probs=163.6
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++||||+++++ ++.... .+|+|||| .|++|.+++...+ .+++..++.++.||+.||.|||++|
T Consensus 39 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~ 113 (312)
T cd05585 39 HTLAERTVLAQVNCPFIVPLKF-SFQSPE---KLYLVLAFINGGELFHHLQREG-RFDLSRARFYTAELLCALENLHKFN 113 (312)
T ss_pred HHHHHHHHHHhCCCCcEeceee-EEecCC---eEEEEEcCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 4457888999999999999998 555443 67999999 9999999995543 4999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.++|+|||++....... +
T Consensus 114 i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~---------------------------------~------------ 148 (312)
T cd05585 114 VIYRDLKPENILLDYQGHIALCDFGLCKLNMKDD---------------------------------D------------ 148 (312)
T ss_pred eEeCCCCHHHeEECCCCcEEEEECcccccCccCC---------------------------------C------------
Confidence 9999999999999999999999999874210000 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......||+.|+|||++.+..++.++|||||||++
T Consensus 149 ---------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil 183 (312)
T cd05585 149 ---------------------------------------------KTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLL 183 (312)
T ss_pred ---------------------------------------------ccccccCCcccCCHHHHcCCCCCCccceechhHHH
Confidence 00114689999999999998899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCC---ChHHHHcCcccCCC
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRP---KMGELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rp---ta~eiL~hp~~~~~ 367 (720)
|||++ ||...... .....+... +..++... +...+|+.+||.+||.+|| ++.|+|.||||...
T Consensus 184 ~el~tg~~pf~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~hp~~~~~ 253 (312)
T cd05585 184 YEMLTGLPPFYDENVN-EMYRKILQE--PLRFPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNHPFFSQL 253 (312)
T ss_pred HHHHhCCCCcCCCCHH-HHHHHHHcC--CCCCCCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcCCCcCCC
Confidence 99999 66554433 233333322 12222233 4455999999999999997 58999999999875
No 39
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.8e-34 Score=296.09 Aligned_cols=214 Identities=18% Similarity=0.212 Sum_probs=165.6
Q ss_pred hhhhhcccCCCCCceecccceeecCCC-CCcEEEEEecCCCCHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAA-IDPFVHAIEWGDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~-~~~~~lv~E~~ggsL~~~L~~---~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+|..+|..++|||||++...++..... .....+||||...+|.++++. .+..++..+++-|.+||++||.|||+.|
T Consensus 66 rEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVleymP~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~ 145 (364)
T KOG0658|consen 66 RELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVLEYMPETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHG 145 (364)
T ss_pred HHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHHHhchHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcC
Confidence 888899999999999999855544444 346788999988999999963 3556999999999999999999999999
Q ss_pred ceeccCCCCcEEEccC-CceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 142 IVVHNVRPSCFVMSSF-NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 142 IvHrDLKP~NILl~~~-~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
|+||||||.|+|++.+ |.+||||||.|+.....+
T Consensus 146 IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~e--------------------------------------------- 180 (364)
T KOG0658|consen 146 ICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKGE--------------------------------------------- 180 (364)
T ss_pred cccCCCChheEEEcCCCCeEEeccCCcceeeccCC---------------------------------------------
Confidence 9999999999999955 999999999985431110
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC-CCccccchhhhc
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGV 299 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGv 299 (720)
.+..+..|..|+|||.+.|.. |+++.||||.||
T Consensus 181 ----------------------------------------------pniSYicSRyYRaPELifga~~Yt~~IDiWSaGC 214 (364)
T KOG0658|consen 181 ----------------------------------------------PNISYICSRYYRAPELIFGATEYTTSIDIWSAGC 214 (364)
T ss_pred ----------------------------------------------CceeEEEeccccCHHHHcCccccCceeEEhhhhH
Confidence 001256799999999999987 999999999999
Q ss_pred hhhhccc--cC-CCCchHHHHHHHhhc-C-----------------CCC---cc-----cc-ccCchHHHHHHHcCCCCC
Q 004989 300 LLFELFC--PF-STGEEKTRTMSSLRH-R-----------------VLP---PQ-----LL-LKFPKEASFCLWLLHPEP 349 (720)
Q Consensus 300 ll~eLlt--pf-~~~~~~~~~~~~l~~-~-----------------~~p---~~-----~~-~~~p~~~~Li~~~L~~dP 349 (720)
++.||+- |. ++.....+....+.- + .+| +. +. ...|+..+|+.++|.++|
T Consensus 215 V~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P 294 (364)
T KOG0658|consen 215 VMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSP 294 (364)
T ss_pred HHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccCh
Confidence 9999998 43 333332222211110 0 001 00 11 123455699999999999
Q ss_pred CCCCChHHHHcCcccCCCccc
Q 004989 350 SGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 350 ~~Rpta~eiL~hp~~~~~~~~ 370 (720)
.+|.++.|+|.||||.+.+++
T Consensus 295 ~~R~~~~~~l~h~fFdelr~~ 315 (364)
T KOG0658|consen 295 SKRLSALEALAHPFFDELRDP 315 (364)
T ss_pred hhcCCHHHHhcchhhHHhhCc
Confidence 999999999999999988664
No 40
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=6e-33 Score=295.83 Aligned_cols=214 Identities=15% Similarity=0.200 Sum_probs=161.9
Q ss_pred hhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 62 LRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 62 ~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
.+..+|..+++.++||||+++++ ++.+.. ..|+||||.+++|.+++......+++..++.++.||+.||.|||++|
T Consensus 48 ~~~~~E~~~l~~l~h~niv~~~~-~~~~~~---~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ 123 (303)
T cd07869 48 FTAIREASLLKGLKHANIVLLHD-IIHTKE---TLTLVFEYVHTDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRY 123 (303)
T ss_pred hhHHHHHHHHhhCCCCCcCeEEE-EEecCC---eEEEEEECCCcCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 34457888999999999999999 555443 57999999778999999666566999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||++....... .
T Consensus 124 ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~--------------------------------~------------- 158 (303)
T cd07869 124 ILHRDLKPQNLLISDTGELKLADFGLARAKSVPS--------------------------------H------------- 158 (303)
T ss_pred eecCCCCHHHEEECCCCCEEECCCCcceeccCCC--------------------------------c-------------
Confidence 9999999999999999999999998873211100 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC-CCccccchhhhch
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVL 300 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGvl 300 (720)
......||+.|+|||++.+.. ++.++|||||||+
T Consensus 159 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~i 193 (303)
T cd07869 159 ---------------------------------------------TYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCI 193 (303)
T ss_pred ---------------------------------------------cCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHH
Confidence 000135799999999987654 8899999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhc---CC----------------------CCcccc------ccCchHHHHHHHcCC
Q 004989 301 LFELFC---PFSTGEEKTRTMSSLRH---RV----------------------LPPQLL------LKFPKEASFCLWLLH 346 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~---~~----------------------~p~~~~------~~~p~~~~Li~~~L~ 346 (720)
+|||++ ||............+.. .. .+..+. ...+...+|+.+||+
T Consensus 194 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~ 273 (303)
T cd07869 194 FVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQ 273 (303)
T ss_pred HHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhc
Confidence 999999 66654332222211110 00 000000 011344599999999
Q ss_pred CCCCCCCChHHHHcCcccCCCcc
Q 004989 347 PEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 347 ~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
+||.+|||+.|+|+||||+....
T Consensus 274 ~dp~~R~s~~~~l~h~~f~~~~~ 296 (303)
T cd07869 274 CFPKNRLSAQAALSHEYFSDLPP 296 (303)
T ss_pred cCchhccCHHHHhcCcccccCCh
Confidence 99999999999999999988643
No 41
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=6.7e-33 Score=299.50 Aligned_cols=219 Identities=15% Similarity=0.159 Sum_probs=161.9
Q ss_pred hchhhhhhcccCCCCCceecccceeecC-CCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENE-AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~-~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|++++||||+++++++.... .....+|++|||.+++|.+++.... .+++..++.++.||+.||.|||++|
T Consensus 45 ~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~ 123 (338)
T cd07859 45 RILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYVVFELMESDLHQVIKAND-DLTPEHHQFFLYQLLRALKYIHTAN 123 (338)
T ss_pred HHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEEEEEecCCCCHHHHHHhcc-cCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 4557888999999999999999443222 2233589999998789999995543 4999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||++.........
T Consensus 124 ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~-------------------------------------------- 159 (338)
T cd07859 124 VFHRDLKPKNILANADCKLKICDFGLARVAFNDTPT-------------------------------------------- 159 (338)
T ss_pred eecCCCCHHHeEECCCCcEEEccCccccccccccCc--------------------------------------------
Confidence 999999999999999999999999887432111000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC--CCCCccccchhhhc
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG--APVSCASDIYRLGV 299 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~--~~~s~~sDIwSLGv 299 (720)
.......+||+.|+|||++.+ ..++.++|||||||
T Consensus 160 -------------------------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGv 196 (338)
T cd07859 160 -------------------------------------------AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGC 196 (338)
T ss_pred -------------------------------------------cccccCCCCCCCcCCHHHHhccccccCchhHHHHHHH
Confidence 000011478999999999876 45899999999999
Q ss_pred hhhhccc---cCCCCchHHH--HH------------------------HHhhcCCCC---ccccccCchHHHHHHHcCCC
Q 004989 300 LLFELFC---PFSTGEEKTR--TM------------------------SSLRHRVLP---PQLLLKFPKEASFCLWLLHP 347 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~--~~------------------------~~l~~~~~p---~~~~~~~p~~~~Li~~~L~~ 347 (720)
++|||++ ||........ .+ ..+...... ..+....+...+|+.+||..
T Consensus 197 vl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~ 276 (338)
T cd07859 197 IFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAF 276 (338)
T ss_pred HHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCc
Confidence 9999999 5544322110 00 001110000 11112234456999999999
Q ss_pred CCCCCCChHHHHcCcccCCCcc
Q 004989 348 EPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 348 dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
||++|||+.|+|+||||+....
T Consensus 277 ~P~~Rpt~~e~l~hp~f~~~~~ 298 (338)
T cd07859 277 DPKDRPTAEEALADPYFKGLAK 298 (338)
T ss_pred CcccCCCHHHHhcCchhhhcCc
Confidence 9999999999999999987644
No 42
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=7.4e-33 Score=293.05 Aligned_cols=208 Identities=16% Similarity=0.198 Sum_probs=157.5
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
+..+|..++.+++||||+++++ ++.... .+++||||.+++|.+++...+..+++..++.++.||+.||+|||++||
T Consensus 49 ~~~~E~~~l~~l~h~niv~~~~-~~~~~~---~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i 124 (288)
T cd07871 49 TAIREVSLLKNLKHANIVTLHD-IIHTER---CLTLVFEYLDSDLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKI 124 (288)
T ss_pred hHHHHHHHHHhCCCCCEeeEEE-EEcCCC---eEEEEEeCCCcCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 3346788999999999999999 554443 579999996679999996655568999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.+||+|||++....... .
T Consensus 125 vH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~---------------------------------~------------- 158 (288)
T cd07871 125 LHRDLKPQNLLINEKGELKLADFGLARAKSVPT---------------------------------K------------- 158 (288)
T ss_pred ccCCCCHHHEEECCCCCEEECcCcceeeccCCC---------------------------------c-------------
Confidence 999999999999999999999998874321100 0
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC-CCCccccchhhhchh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLL 301 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGvll 301 (720)
......||+.|+|||++.+. .++.++|||||||++
T Consensus 159 --------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l 194 (288)
T cd07871 159 --------------------------------------------TYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCIL 194 (288)
T ss_pred --------------------------------------------cccCceecccccChHHhcCCcccCcHHHHHHHHHHH
Confidence 00013578999999998764 489999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcC--------------------CCCcc--------ccccCchHHHHHHHcCCCCCC
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRHR--------------------VLPPQ--------LLLKFPKEASFCLWLLHPEPS 350 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~--------------------~~p~~--------~~~~~p~~~~Li~~~L~~dP~ 350 (720)
|||++ ||............+... .+|.. .....++..+||.+||++||.
T Consensus 195 ~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~ 274 (288)
T cd07871 195 YEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETK 274 (288)
T ss_pred HHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcc
Confidence 99999 565543332221111100 00000 011123455999999999999
Q ss_pred CCCChHHHHcCccc
Q 004989 351 GRPKMGELLQSEFL 364 (720)
Q Consensus 351 ~Rpta~eiL~hp~~ 364 (720)
+|||++|+|+||||
T Consensus 275 ~R~t~~~~l~hp~f 288 (288)
T cd07871 275 SRISAEAALRHSYF 288 (288)
T ss_pred cCCCHHHHhcCCCC
Confidence 99999999999998
No 43
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=4e-33 Score=302.58 Aligned_cols=203 Identities=16% Similarity=0.141 Sum_probs=163.3
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++..++|||||++++ ++.+.. .+|++||| .|++|.+++.... .+++..++.++.||+.||.|||++||
T Consensus 78 ~~~E~~~l~~l~hp~Iv~~~~-~~~~~~---~~~lv~Ey~~~g~L~~~i~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~i 152 (340)
T PTZ00426 78 VFSERKILNYINHPFCVNLYG-SFKDES---YLYLVLEFVIGGEFFTFLRRNK-RFPNDVGCFYAAQIVLIFEYLQSLNI 152 (340)
T ss_pred HHHHHHHHHhCCCCCCcceEE-EEEeCC---EEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 346788999999999999999 555443 68999999 8999999995544 49999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.+||+|||++......
T Consensus 153 vHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~------------------------------------------------ 184 (340)
T PTZ00426 153 VYRDLKPENLLLDKDGFIKMTDFGFAKVVDTR------------------------------------------------ 184 (340)
T ss_pred EccCCCHHHEEECCCCCEEEecCCCCeecCCC------------------------------------------------
Confidence 99999999999999999999999887321100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
.....||+.|+|||++.+..++.++|||||||++|
T Consensus 185 ---------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ 219 (340)
T PTZ00426 185 ---------------------------------------------TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIY 219 (340)
T ss_pred ---------------------------------------------cceecCChhhcCHHHHhCCCCCccccccchhhHHH
Confidence 00136899999999999888999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCCCcccccc-CchHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC
Q 004989 303 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLK-FPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 367 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~-~p~~~~Li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~ 367 (720)
||++ ||...... .....+...... ++.. .+...+|+.+||+.||.+|+ ++.++++||||...
T Consensus 220 ell~G~~Pf~~~~~~-~~~~~i~~~~~~--~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~f~~~ 290 (340)
T PTZ00426 220 EILVGCPPFYANEPL-LIYQKILEGIIY--FPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWFGNI 290 (340)
T ss_pred HHhcCCCCCCCCCHH-HHHHHHhcCCCC--CCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence 9999 66654443 334444433221 1122 23455999999999999995 89999999999875
No 44
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=3.1e-33 Score=295.45 Aligned_cols=209 Identities=13% Similarity=0.167 Sum_probs=161.9
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+..+|..+|.+++||||+++++ .+.+.. .++++||| .+++|.+++.. ....+++..++.++.||+.||.|||++
T Consensus 46 ~~~~E~~il~~l~~~~iv~~~~-~~~~~~---~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~ 121 (285)
T cd05631 46 MALNEKRILEKVNSRFVVSLAY-AYETKD---ALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRE 121 (285)
T ss_pred HHHHHHHHHHhcCCCcEEEEEE-EEccCC---eEEEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 3446888999999999999999 554443 57999999 89999988843 334589999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+|||++.++.++|+|||++.......
T Consensus 122 ~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~--------------------------------------------- 156 (285)
T cd05631 122 RIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGE--------------------------------------------- 156 (285)
T ss_pred CEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCC---------------------------------------------
Confidence 99999999999999999999999998873211000
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhch
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
......||+.|+|||++.+..++.++|||||||+
T Consensus 157 ----------------------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvi 190 (285)
T cd05631 157 ----------------------------------------------TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCL 190 (285)
T ss_pred ----------------------------------------------eecCCCCCCCccCHhhhcCCCCCcccCchhHHHH
Confidence 0001368999999999998889999999999999
Q ss_pred hhhccc---cCCCCchH---HHHHHHhhcCCCCcccccc-CchHHHHHHHcCCCCCCCCCC-----hHHHHcCcccCCCc
Q 004989 301 LFELFC---PFSTGEEK---TRTMSSLRHRVLPPQLLLK-FPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEPR 368 (720)
Q Consensus 301 l~eLlt---pf~~~~~~---~~~~~~l~~~~~p~~~~~~-~p~~~~Li~~~L~~dP~~Rpt-----a~eiL~hp~~~~~~ 368 (720)
+|||++ ||...... ......+... +..+... .+...+|+.+||..||.+||+ ++++++||||....
T Consensus 191 l~el~~g~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~~~~~ 268 (285)
T cd05631 191 IYEMIQGQSPFRKRKERVKREEVDRRVKED--QEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFKNIN 268 (285)
T ss_pred HHHHHhCCCCCCCCCcchhHHHHHHHhhcc--cccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHhhcCCC
Confidence 999999 66554321 1112222111 1122222 344559999999999999997 89999999999873
No 45
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=6.5e-33 Score=277.24 Aligned_cols=202 Identities=19% Similarity=0.273 Sum_probs=156.4
Q ss_pred CCCCCceecccceeecC-CCCCcEEEEEec-CCCCHHHHHh-CCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCC
Q 004989 74 GDHLRNQGGLSGVCENE-AAIDPFVHAIEW-GDVSLRQWLD-KPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPS 150 (720)
Q Consensus 74 l~HpnIV~l~~~~~~~~-~~~~~~~lv~E~-~ggsL~~~L~-~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~ 150 (720)
-.|||||.+++ +|+.. .....+.+|||+ .||.|...|. +....+++.++-.|++||..||.|||+.+|.||||||+
T Consensus 112 s~h~~iV~Iid-VyeNs~~~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpE 190 (400)
T KOG0604|consen 112 SGHPHIVSIID-VYENSYQGRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPE 190 (400)
T ss_pred cCCCceEEeeh-hhhhhccCceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChh
Confidence 46999999999 55443 334457889999 9999999993 44556999999999999999999999999999999999
Q ss_pred cEEEc---cCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccccccc
Q 004989 151 CFVMS---SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 227 (720)
Q Consensus 151 NILl~---~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q 227 (720)
|+|.. .+..+||+|||+|+....+ .++
T Consensus 191 NLLyt~t~~na~lKLtDfGFAK~t~~~---------------------------------~~L----------------- 220 (400)
T KOG0604|consen 191 NLLYTTTSPNAPLKLTDFGFAKETQEP---------------------------------GDL----------------- 220 (400)
T ss_pred heeeecCCCCcceEecccccccccCCC---------------------------------ccc-----------------
Confidence 99997 4456788777776432111 000
Q ss_pred CCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhcccc
Q 004989 228 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFCP 307 (720)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLltp 307 (720)
...+-||+|.|||++-...|+.+.|+|||||++|-|||+
T Consensus 221 -----------------------------------------~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCG 259 (400)
T KOG0604|consen 221 -----------------------------------------MTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 259 (400)
T ss_pred -----------------------------------------cCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcC
Confidence 113559999999999888899999999999999999995
Q ss_pred CCCC---ch--H-HHHHHHhhc--CCCCccccccCchHH-HHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 308 FSTG---EE--K-TRTMSSLRH--RVLPPQLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 308 f~~~---~~--~-~~~~~~l~~--~~~p~~~~~~~p~~~-~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|+++ .. . --+...|+. ..+|..-+...++.+ ++|+.+|..+|.+|.|+.+++.|||+++.
T Consensus 260 yPPFYS~hg~aispgMk~rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~~ 328 (400)
T KOG0604|consen 260 YPPFYSNHGLAISPGMKRRIRTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQY 328 (400)
T ss_pred CCcccccCCccCChhHHhHhhccCccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCchhccc
Confidence 5543 11 0 112233333 345555555555555 99999999999999999999999999987
No 46
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=1.4e-32 Score=290.49 Aligned_cols=205 Identities=17% Similarity=0.217 Sum_probs=152.8
Q ss_pred hhcccCCCCCceecccceeec-CCCCCcEEEEEecCCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCceecc
Q 004989 69 VELTHGDHLRNQGGLSGVCEN-EAAIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 146 (720)
Q Consensus 69 ~~L~~l~HpnIV~l~~~~~~~-~~~~~~~~lv~E~~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrD 146 (720)
..|..++||||+++++.+... ......++++|||.+++|.+++.. ....+++..++.++.||+.||.|||++||+|||
T Consensus 56 ~~l~~~~hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~d 135 (290)
T cd07862 56 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRD 135 (290)
T ss_pred HhhcccCCCCcceEEEEEecccCCCCCcEEEEEccCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCC
Confidence 344556899999999943322 122346899999977899999944 334589999999999999999999999999999
Q ss_pred CCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccc
Q 004989 147 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 226 (720)
Q Consensus 147 LKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~ 226 (720)
|||+|||++.++.++|+|||++.......
T Consensus 136 lkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--------------------------------------------------- 164 (290)
T cd07862 136 LKPQNILVTSSGQIKLADFGLARIYSFQM--------------------------------------------------- 164 (290)
T ss_pred CCHHHEEEcCCCCEEEccccceEeccCCc---------------------------------------------------
Confidence 99999999999999999998873321000
Q ss_pred cCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhccc
Q 004989 227 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC 306 (720)
Q Consensus 227 q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt 306 (720)
......||+.|+|||++.+..++.++|||||||++|||++
T Consensus 165 ----------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~ 204 (290)
T cd07862 165 ----------------------------------------ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR 204 (290)
T ss_pred ----------------------------------------ccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHc
Confidence 0011367999999999988889999999999999999999
Q ss_pred ---cCCCCchHHHHHHHhhcCCCC--c----------------------cccccC-chHHHHHHHcCCCCCCCCCChHHH
Q 004989 307 ---PFSTGEEKTRTMSSLRHRVLP--P----------------------QLLLKF-PKEASFCLWLLHPEPSGRPKMGEL 358 (720)
Q Consensus 307 ---pf~~~~~~~~~~~~l~~~~~p--~----------------------~~~~~~-p~~~~Li~~~L~~dP~~Rpta~ei 358 (720)
||............+.....| . .+.... +...+|+.+||++||++|||+.|+
T Consensus 205 g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~ 284 (290)
T cd07862 205 RKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSA 284 (290)
T ss_pred CCCCcCCCCHHHHHHHHHHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHH
Confidence 565544332222222111000 0 011112 233599999999999999999999
Q ss_pred HcCccc
Q 004989 359 LQSEFL 364 (720)
Q Consensus 359 L~hp~~ 364 (720)
|+||||
T Consensus 285 l~hp~f 290 (290)
T cd07862 285 LSHPYF 290 (290)
T ss_pred hcCCCC
Confidence 999997
No 47
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=8.8e-33 Score=295.07 Aligned_cols=244 Identities=16% Similarity=0.217 Sum_probs=186.4
Q ss_pred eeecCCCcccccccccCCcccccccccCCCCCCcccccccccCCCCccchhhchhhhhhcccCCCCCceecccceeecCC
Q 004989 12 RIIMEGSSDSAWQDSDSSRALNISGVSDRNPRLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEA 91 (720)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~ 91 (720)
-|.+|..++=-|..+++-+++-.+-+. .+.+++++ ..--+|.++..|.+|+||||+.+.| +|....
T Consensus 120 eiPFe~IsELeWlGSGaQGAVF~Grl~---netVAVKK----------V~elkETdIKHLRkLkH~NII~FkG-VCtqsP 185 (904)
T KOG4721|consen 120 EIPFEEISELEWLGSGAQGAVFLGRLH---NETVAVKK----------VRELKETDIKHLRKLKHPNIITFKG-VCTQSP 185 (904)
T ss_pred cCCHHHhhhhhhhccCcccceeeeecc---CceehhHH----------HhhhhhhhHHHHHhccCcceeeEee-eecCCc
Confidence 466777777778776666655544332 23333332 1224568888999999999999999 554443
Q ss_pred CCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccC
Q 004989 92 AIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSD 170 (720)
Q Consensus 92 ~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~ 170 (720)
-+||+||| ..|.|.+.|+. ++.++......|..+|+.|+.|||.+.|||||||.-||||+.+..|||+|||.++.
T Consensus 186 ---cyCIiMEfCa~GqL~~VLka-~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e 261 (904)
T KOG4721|consen 186 ---CYCIIMEFCAQGQLYEVLKA-GRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDVVKISDFGTSKE 261 (904)
T ss_pred ---eeEEeeeccccccHHHHHhc-cCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccceEEeccccchHh
Confidence 57999999 89999999954 45689999999999999999999999999999999999999999999999998743
Q ss_pred CCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCCCcccccccccccccccccccc
Q 004989 171 SGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDN 250 (720)
Q Consensus 171 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~ 250 (720)
.. |.
T Consensus 262 ~~------------------------------------~~---------------------------------------- 265 (904)
T KOG4721|consen 262 LS------------------------------------DK---------------------------------------- 265 (904)
T ss_pred hh------------------------------------hh----------------------------------------
Confidence 21 00
Q ss_pred ccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhccc---cCCCCchHHHHHHHhhcCCCC
Q 004989 251 RVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLP 327 (720)
Q Consensus 251 g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p 327 (720)
-+...+.||..|||||++...+++.++|||||||+|||||| ||...+.. .++--+....+.
T Consensus 266 ---------------STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdss-AIIwGVGsNsL~ 329 (904)
T KOG4721|consen 266 ---------------STKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSS-AIIWGVGSNSLH 329 (904)
T ss_pred ---------------hhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchh-eeEEeccCCccc
Confidence 00122689999999999999999999999999999999999 77664433 122222334444
Q ss_pred ccccccCchHH-HHHHHcCCCCCCCCCChHHHHcCcccC
Q 004989 328 PQLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLN 365 (720)
Q Consensus 328 ~~~~~~~p~~~-~Li~~~L~~dP~~Rpta~eiL~hp~~~ 365 (720)
-..+..+|+.. -|++.||.-.|..||++.+||.|==|.
T Consensus 330 LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa 368 (904)
T KOG4721|consen 330 LPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIA 368 (904)
T ss_pred ccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhhc
Confidence 44556777766 678889999999999999999985333
No 48
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=9.9e-33 Score=298.34 Aligned_cols=204 Identities=17% Similarity=0.238 Sum_probs=162.3
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..|..+|.+++||||+++++ .+.... .+|+|||| .|++|.+++...+ .+++..++.++.||+.||.|||++||+
T Consensus 49 ~~e~~~l~~~~h~~iv~~~~-~~~~~~---~~~lv~e~~~g~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH~~~iv 123 (333)
T cd05600 49 LTERDILTTTKSEWLVKLLY-AFQDDE---YLYLAMEYVPGGDFRTLLNNLG-VLSEDHARFYMAEMFEAVDALHELGYI 123 (333)
T ss_pred HHHHHHHHhCCCCCCccEEE-EEEcCC---EEEEEEeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 36777899999999999999 555443 68999999 8999999995543 489999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.+||+|||++......
T Consensus 124 H~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~~------------------------------------------------- 154 (333)
T cd05600 124 HRDLKPENFLIDASGHIKLTDFGLSKGIVTY------------------------------------------------- 154 (333)
T ss_pred ccCCCHHHEEECCCCCEEEEeCcCCcccccc-------------------------------------------------
Confidence 9999999999999999999999887321000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
....+||+.|+|||++.+..++.++|||||||++||
T Consensus 155 --------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~e 190 (333)
T cd05600 155 --------------------------------------------ANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYE 190 (333)
T ss_pred --------------------------------------------cCCcccCccccChhHhcCCCCCCccceecchHHHhh
Confidence 011468999999999999899999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcC---CCCcccc----ccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 304 LFC---PFSTGEEKTRTMSSLRHR---VLPPQLL----LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~---~~p~~~~----~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|++ ||...... ..+..+... ...+... ...+...+|+.+||..+|.+||++.++++||||...
T Consensus 191 ll~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h~~~~~~ 263 (333)
T cd05600 191 FLCGFPPFSGSTPN-ETWENLKYWKETLQRPVYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNHPFFKEV 263 (333)
T ss_pred hhhCCCCCCCCCHH-HHHHHHHhccccccCCCCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhCcccCCC
Confidence 999 66554332 222222221 1111111 223455699999999999999999999999999975
No 49
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6e-33 Score=298.59 Aligned_cols=210 Identities=18% Similarity=0.236 Sum_probs=166.9
Q ss_pred hhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCcee
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|+.||+.++||+||+||+.+|..+ .++++.|| +||-...++-.-++.|++.++..+++|+++||.|||+++|||
T Consensus 78 VEIeILa~CdHP~ivkLl~ayy~en----kLwiliEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIH 153 (1187)
T KOG0579|consen 78 VEIEILAECDHPVIVKLLSAYYFEN----KLWILIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIH 153 (1187)
T ss_pred hhhhhhhcCCChHHHHHHHHHhccC----ceEEEEeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhh
Confidence 6778999999999999999777665 47999999 788888877777788999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccc
Q 004989 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
||||..|||++-+|.++|+|||++...-..
T Consensus 154 RDLKAGNiL~TldGdirLADFGVSAKn~~t-------------------------------------------------- 183 (1187)
T KOG0579|consen 154 RDLKAGNILLTLDGDIRLADFGVSAKNKST-------------------------------------------------- 183 (1187)
T ss_pred hhccccceEEEecCcEeeecccccccchhH--------------------------------------------------
Confidence 999999999999999999999986211000
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCccccc-----CCCCCccccchhhhc
Q 004989 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-----GAPVSCASDIYRLGV 299 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~-----~~~~s~~sDIwSLGv 299 (720)
-.+...++|||+|||||++. ..+|++++||||||+
T Consensus 184 ----------------------------------------~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGI 223 (1187)
T KOG0579|consen 184 ----------------------------------------RQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGI 223 (1187)
T ss_pred ----------------------------------------HhhhccccCCcccccchheeeccccCCCchhhhhHHhhhh
Confidence 00112268999999999974 456999999999999
Q ss_pred hhhhccccCCCC--chHHHHHHHhhcCCCCccc-cccCchH-HHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004989 300 LLFELFCPFSTG--EEKTRTMSSLRHRVLPPQL-LLKFPKE-ASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 300 ll~eLltpf~~~--~~~~~~~~~l~~~~~p~~~-~~~~p~~-~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
+|.||.-.-++. -.....+..+.+..+|.-+ ++.|... .||+.+||..||..||++.+||+||||.....
T Consensus 224 TLIEMAqiEPPHhelnpMRVllKiaKSePPTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv~~~~S 297 (1187)
T KOG0579|consen 224 TLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKHPFVQNAPS 297 (1187)
T ss_pred HHHHHhccCCCccccchHHHHHHHhhcCCCcccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhhCcccccCCc
Confidence 999999833232 2223444445444433322 3455544 49999999999999999999999999997644
No 50
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=1.9e-32 Score=301.85 Aligned_cols=257 Identities=15% Similarity=0.227 Sum_probs=166.5
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++|||||++++ .+.+.. .+|+|||| .|++|.+++.+.. .+++..++.++.||+.||.|||++|
T Consensus 47 ~~~~E~~il~~l~h~~iv~l~~-~~~~~~---~~~lv~E~~~gg~L~~~l~~~~-~~~e~~~~~~~~qi~~aL~~LH~~g 121 (381)
T cd05626 47 HVKAERDILAEADNEWVVKLYY-SFQDKD---NLYFVMDYIPGGDMMSLLIRME-VFPEVLARFYIAELTLAIESVHKMG 121 (381)
T ss_pred HHHHHHHHHHhcCCCCeeeeEE-EEecCC---EEEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 4457778999999999999999 555443 68999999 8999999995544 4899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.+++++|+|||++..+............. ..+. ....+... ..+..
T Consensus 122 ivHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~--------~~~~~---------- 181 (381)
T cd05626 122 FIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQKGS-HIRQ-DSMEPSDL--------WDDVS---------- 181 (381)
T ss_pred eeecCCcHHHEEECCCCCEEEeeCcCCcccccccccccccccc-cccc-cccCcccc--------ccccc----------
Confidence 9999999999999999999999999986543221100000000 0000 00000000 00000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
.+ ..+. ...+.. ...............+||+.|+|||++.+..++.++|||||||++
T Consensus 182 --~~-----~~~~-----------~~~~~~-----~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il 238 (381)
T cd05626 182 --NC-----RCGD-----------RLKTLE-----QRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVIL 238 (381)
T ss_pred --cc-----cccc-----------ccchhh-----ccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhHH
Confidence 00 0000 000000 000000000001225799999999999988899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhh--cCCCCccccccCchHHHHHHHcC--CCCCCCCCChHHHHcCcccCCC
Q 004989 302 FELFC---PFSTGEEKTRTMSSLR--HRVLPPQLLLKFPKEASFCLWLL--HPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~--~~~~p~~~~~~~p~~~~Li~~~L--~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|||++ ||............+. .....+......+...+||.+|| ..+|..||++.++++||||...
T Consensus 239 ~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~hp~f~~~ 311 (381)
T cd05626 239 FEMLVGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAHPFFSEV 311 (381)
T ss_pred HHHHhCCCCCcCCCHHHHHHHHHccccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCcccCCC
Confidence 99999 6665544333332222 11111222234456679999855 4555669999999999999875
No 51
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=1.6e-32 Score=296.33 Aligned_cols=207 Identities=17% Similarity=0.245 Sum_probs=162.9
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|..++||||+++++ ++.... .+|+|||| .+++|.+++... ..+++.+++.++.||+.||.|||++|
T Consensus 41 ~~~~E~~~l~~l~hp~iv~~~~-~~~~~~---~~~lv~Ey~~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~LH~~~ 115 (328)
T cd05593 41 HTLTESRVLKNTRHPFLTSLKY-SFQTKD---RLCFVMEYVNGGELFFHLSRE-RVFSEDRTRFYGAEIVSALDYLHSGK 115 (328)
T ss_pred HHHHHHHHHHhCCCCCCcceEE-EEEcCC---EEEEEEeCCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 4457788999999999999998 555443 67999999 899999998544 35999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||++.......
T Consensus 116 ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~---------------------------------------------- 149 (328)
T cd05593 116 IVYRDLKLENLMLDKDGHIKITDFGLCKEGITDA---------------------------------------------- 149 (328)
T ss_pred eEecccCHHHeEECCCCcEEEecCcCCccCCCcc----------------------------------------------
Confidence 9999999999999999999999998873210000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......+||+.|+|||++.+..++.++|||||||++
T Consensus 150 --------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil 185 (328)
T cd05593 150 --------------------------------------------ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVM 185 (328)
T ss_pred --------------------------------------------cccccccCCcCccChhhhcCCCCCccCCccccchHH
Confidence 000114689999999999988899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCcccccc-CchHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLK-FPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~-~p~~~~Li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~ 367 (720)
|||++ ||...... .....+..... .++.. .+...+|+.+||.+||.+|| ++.++++||||...
T Consensus 186 ~elltG~~Pf~~~~~~-~~~~~~~~~~~--~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~ 257 (328)
T cd05593 186 YEMMCGRLPFYNQDHE-KLFELILMEDI--KFPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFFTGV 257 (328)
T ss_pred HHHhhCCCCCCCCCHH-HHHHHhccCCc--cCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence 99999 66554332 22223222111 12222 34556999999999999997 89999999999875
No 52
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3e-33 Score=272.54 Aligned_cols=245 Identities=16% Similarity=0.205 Sum_probs=183.9
Q ss_pred ccccCCcccccccccC------CCCCCcccccccccCCCCccc-hhhchhhhhhcccCCCCCceecccceeecCCCCCcE
Q 004989 24 QDSDSSRALNISGVSD------RNPRLLRGERFGVRGDDSNDF-ELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPF 96 (720)
Q Consensus 24 ~~~~~~~~~~~~~~~~------~~~~~~~~~r~~~~~~~~~~~-~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~ 96 (720)
+..+.+|.+|.+-|+. +...+..+-++.+...-.... .-...||+.|-++|+||||+++|+ +|.+.. .+
T Consensus 22 ~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~-~fhd~~---ri 97 (281)
T KOG0580|consen 22 DDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYG-YFHDSK---RI 97 (281)
T ss_pred hhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhh-heeccc---ee
Confidence 3456788888877775 222222222222211100000 001226666899999999999999 666665 57
Q ss_pred EEEEec-CCCCHHHHHh-CCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCC
Q 004989 97 VHAIEW-GDVSLRQWLD-KPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSD 174 (720)
Q Consensus 97 ~lv~E~-~ggsL~~~L~-~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~ 174 (720)
|+++|| .+|+|...|. .....+++..+..|++|++.||.|+|..+||||||||+|+|++..|.+|++|||-+.....
T Consensus 98 yLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p~- 176 (281)
T KOG0580|consen 98 YLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS- 176 (281)
T ss_pred EEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCCCeeccCCCceeecCC-
Confidence 999999 9999999994 3455699999999999999999999999999999999999999999999988776521100
Q ss_pred CcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccch
Q 004989 175 SHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNV 254 (720)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~ 254 (720)
T Consensus 177 -------------------------------------------------------------------------------- 176 (281)
T KOG0580|consen 177 -------------------------------------------------------------------------------- 176 (281)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhccc---cCCCCchHHHHHHHhhcCCCCcccc
Q 004989 255 EQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLL 331 (720)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~ 331 (720)
.+....+||..|.+||...+..++..+|+|++|++.||++. ||.... ...++..|++-.+. ++
T Consensus 177 -----------~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~-~~etYkrI~k~~~~--~p 242 (281)
T KOG0580|consen 177 -----------NKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQS-HSETYKRIRKVDLK--FP 242 (281)
T ss_pred -----------CCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhh-hHHHHHHHHHcccc--CC
Confidence 01123689999999999999999999999999999999999 676655 45677777653221 11
Q ss_pred ccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 332 LKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 332 ~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
...+ ..+|||.+||..+|.+|.+..|++.|||+...
T Consensus 243 ~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpwI~a~ 279 (281)
T KOG0580|consen 243 STISGGAADLISRLLVKNPIERLALTEVMDHPWIVAN 279 (281)
T ss_pred cccChhHHHHHHHHhccCccccccHHHHhhhHHHHhc
Confidence 3334 44599999999999999999999999998753
No 53
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=2.6e-32 Score=288.02 Aligned_cols=207 Identities=18% Similarity=0.191 Sum_probs=154.0
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++.+++||||+++++ ++.... .+|+|||| .++.| +.+......+++..++.++.||+.||.|||+.||
T Consensus 47 ~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~l-~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i 121 (287)
T cd07848 47 TLRELKMLRTLKQENIVELKE-AFRRRG---KLYLVFEYVEKNML-ELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDI 121 (287)
T ss_pred HHHHHHHHHhCCCccccchhh-hEecCC---EEEEEEecCCCCHH-HHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 346788999999999999999 444432 68999999 55544 4453434459999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.+||+|||.+........ .
T Consensus 122 ~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~-------------------------------~-------------- 156 (287)
T cd07848 122 VHRDIKPENLLISHNDVLKLCDFGFARNLSEGSN-------------------------------A-------------- 156 (287)
T ss_pred ecCCCCHHHEEEcCCCcEEEeeccCccccccccc-------------------------------c--------------
Confidence 9999999999999999999999998743211000 0
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......||+.|+|||++.+..++.++|||||||++|
T Consensus 157 --------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~ 192 (287)
T cd07848 157 --------------------------------------------NYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILG 192 (287)
T ss_pred --------------------------------------------cccccccccccCCcHHHcCCCCCCchhHHhHHHHHH
Confidence 001136799999999999888999999999999999
Q ss_pred hccc---cCCCCchHHHHHHH--hhcC------------------CCCcc---------ccc-cCchHHHHHHHcCCCCC
Q 004989 303 ELFC---PFSTGEEKTRTMSS--LRHR------------------VLPPQ---------LLL-KFPKEASFCLWLLHPEP 349 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~--l~~~------------------~~p~~---------~~~-~~p~~~~Li~~~L~~dP 349 (720)
||++ ||............ +... ..+.. ... ..+...+||.+||++||
T Consensus 193 el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P 272 (287)
T cd07848 193 ELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNP 272 (287)
T ss_pred HHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCc
Confidence 9999 66554332221111 1000 00000 000 12234599999999999
Q ss_pred CCCCChHHHHcCccc
Q 004989 350 SGRPKMGELLQSEFL 364 (720)
Q Consensus 350 ~~Rpta~eiL~hp~~ 364 (720)
++|||++++|+||||
T Consensus 273 ~~R~s~~~~l~hp~f 287 (287)
T cd07848 273 TDRYLTEQCLNHPAF 287 (287)
T ss_pred ccCCCHHHHhcCCCC
Confidence 999999999999998
No 54
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=99.98 E-value=8.6e-33 Score=304.66 Aligned_cols=256 Identities=15% Similarity=0.198 Sum_probs=168.2
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|++++|||||++++ .+.++. .+|+|||| .|++|.+++.+.+ .+++..++.++.||+.||+|||++|
T Consensus 47 ~~~~E~~il~~~~h~~iv~~~~-~~~~~~---~~~lv~E~~~gg~L~~~l~~~~-~~~e~~~~~~~~qi~~al~~lH~~~ 121 (382)
T cd05625 47 HVKAERDILAEADNEWVVRLYY-SFQDKD---NLYFVMDYIPGGDMMSLLIRMG-IFPEDLARFYIAELTCAVESVHKMG 121 (382)
T ss_pred HHHHHHHHHHhCCCCcCCeEEE-EEEeCC---EEEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3346777999999999999999 555443 68999999 8999999995543 4899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||++..+............ +. .+ ....+|.... . .
T Consensus 122 ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~~~~~-------------~~--~~--~~~~~~~~~~--~---~ 179 (382)
T cd05625 122 FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQSG-------------DH--VR--QDSMDFSNEW--G---D 179 (382)
T ss_pred eecCCCCHHHEEECCCCCEEEeECCCCccccccccccccccc-------------cc--cc--cccccccccc--c---c
Confidence 999999999999999999999999998654221100000000 00 00 0000110000 0 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
...+. .+.. .. ....... ...........+||+.|+|||++.+..++.++|||||||++
T Consensus 180 ~~~~~-----~~~~--~~-------------~~~~~~~-~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil 238 (382)
T cd05625 180 PANCR-----CGDR--LK-------------PLERRAA-RQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVIL 238 (382)
T ss_pred ccccc-----cccc--cc-------------chhhhhc-cccccccccccccCcccCCHHHhcCCCCCCeeeEEechHHH
Confidence 00000 0000 00 0000000 00000011225799999999999988899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhc--CCCCccccccCchHHHHHHHcCCCCCCCCCC---hHHHHcCcccCCC
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRH--RVLPPQLLLKFPKEASFCLWLLHPEPSGRPK---MGELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~--~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpt---a~eiL~hp~~~~~ 367 (720)
|||++ ||............+.. ....|......+...+||.+|+ .+|.+|++ +.++++||||...
T Consensus 239 ~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp~f~~~ 311 (382)
T cd05625 239 YEMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKAHPFFKTI 311 (382)
T ss_pred HHHHhCCCCCCCCCHHHHHHHHHccCCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhcCCCcCCc
Confidence 99999 67665544333333321 1111222234456669999987 59999987 9999999999876
No 55
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=99.98 E-value=1.4e-32 Score=298.66 Aligned_cols=235 Identities=17% Similarity=0.231 Sum_probs=167.2
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..|..++..++||||+++++ .+.++. .+|+|||| .|++|.+++.+. ..+++..++.++.||+.||.|||++||+
T Consensus 49 ~~e~~~l~~~~~~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~gii 123 (350)
T cd05573 49 RAERDILADADSPWIVKLYY-SFQDEE---HLYLVMEYMPGGDLMNLLIRK-DVFPEETARFYIAELVLALDSVHKLGFI 123 (350)
T ss_pred HHHHHHHHhcCCCCccchhh-heecCC---eEEEEEcCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 35677899999999999999 454443 68999999 899999999655 4599999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.++|+|||++............... .+.... .
T Consensus 124 H~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~-------------------------~~~~~~--------~ 170 (350)
T cd05573 124 HRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYYLND-------------------------SHNLLF--------R 170 (350)
T ss_pred ccCCCHHHeEECCCCCEEeecCCCCccCcccCcccccccc-------------------------cccccc--------c
Confidence 9999999999999999999999998654332110000000 000000 0
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
.. ...................||+.|+|||++.+..++.++|||||||++||
T Consensus 171 ~~----------------------------~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~e 222 (350)
T cd05573 171 DN----------------------------VLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYE 222 (350)
T ss_pred cc----------------------------ccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhh
Confidence 00 00000000000111123579999999999999999999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhc---CCCCccccccCchHHHHHHHcCCCCCCCCCC-hHHHHcCcccCCC
Q 004989 304 LFC---PFSTGEEKTRTMSSLRH---RVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-MGELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~---~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpt-a~eiL~hp~~~~~ 367 (720)
|++ ||....... ....+.. ....|......+...+||.+||. ||.+||+ +.++++||||...
T Consensus 223 ll~g~~Pf~~~~~~~-~~~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp~~~~~ 291 (350)
T cd05573 223 MLYGFPPFYSDTLQE-TYNKIINWKESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSHPFFKGI 291 (350)
T ss_pred hccCCCCCCCCCHHH-HHHHHhccCCcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcCCCcCCC
Confidence 999 666555432 2333332 11112222234555699999997 9999999 9999999999875
No 56
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.98 E-value=1.9e-32 Score=293.12 Aligned_cols=229 Identities=21% Similarity=0.253 Sum_probs=169.8
Q ss_pred CCcccccccccCCCCc-cchhhchhhhhhcccCC-CCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCH
Q 004989 43 RLLRGERFGVRGDDSN-DFELRKHSDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDV 120 (720)
Q Consensus 43 ~~~~~~r~~~~~~~~~-~~~~r~~~e~~~L~~l~-HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~ 120 (720)
+..+.+|+++.+.+.+ -..|+ .|+..|.+|. |.+||+||+ |+-. -.++|+||||+..+|..+|++....++.
T Consensus 386 ~iyalkkv~~~~~D~qtl~gy~--nEI~lL~KLkg~~~IIqL~D--YEv~--d~~lYmvmE~Gd~DL~kiL~k~~~~~~~ 459 (677)
T KOG0596|consen 386 QIYALKKVVLLEADNQTLDGYR--NEIALLNKLKGHDKIIQLYD--YEVT--DGYLYMVMECGDIDLNKILKKKKSIDPD 459 (677)
T ss_pred cchhhhHHHHhhcCHHHHHHHH--HHHHHHHHhcCCceEEEEee--eecc--CceEEEEeecccccHHHHHHhccCCCch
Confidence 4445566555444322 23344 4555777754 899999999 4333 2368999999999999999887776776
Q ss_pred HHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhh
Q 004989 121 YECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQ 200 (720)
Q Consensus 121 ~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (720)
..++.|..|++.+|.++|.+||||.||||.|||+- .|.+||||||.|.....+..
T Consensus 460 ~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~DTT------------------------ 514 (677)
T KOG0596|consen 460 WFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLV-KGRLKLIDFGIANAIQPDTT------------------------ 514 (677)
T ss_pred HHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEE-eeeEEeeeechhcccCcccc------------------------
Confidence 79999999999999999999999999999999995 68999999998854332210
Q ss_pred hhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCc
Q 004989 201 RRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASP 280 (720)
Q Consensus 201 ~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~AP 280 (720)
.+ -....+||+.||+|
T Consensus 515 ---------------------------------------------sI-------------------~kdsQvGT~NYMsP 530 (677)
T KOG0596|consen 515 ---------------------------------------------SI-------------------VKDSQVGTVNYMSP 530 (677)
T ss_pred ---------------------------------------------ce-------------------eeccccCcccccCH
Confidence 00 01125899999999
Q ss_pred ccccCCC-----------CCccccchhhhchhhhccc---cCCCCchHHHHHHHhhcC---CCCccccccCchHHHHHHH
Q 004989 281 EELAGAP-----------VSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHR---VLPPQLLLKFPKEASFCLW 343 (720)
Q Consensus 281 E~l~~~~-----------~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~---~~p~~~~~~~p~~~~Li~~ 343 (720)
|.+.... .+.++||||||||||+|+. ||........-+..|... +.-|.....++ ..++++.
T Consensus 531 EAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~aKl~aI~~P~~~Iefp~~~~~~~-li~~mK~ 609 (677)
T KOG0596|consen 531 EALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQIAKLHAITDPNHEIEFPDIPENDE-LIDVMKC 609 (677)
T ss_pred HHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHHHHHHHhhcCCCccccccCCCCchH-HHHHHHH
Confidence 9985332 5689999999999999998 666554443444444432 12222333332 5699999
Q ss_pred cCCCCCCCCCChHHHHcCcccCCC
Q 004989 344 LLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 344 ~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
||.+||.+||++.|+|+|||++..
T Consensus 610 CL~rdPkkR~si~eLLqhpFl~~~ 633 (677)
T KOG0596|consen 610 CLARDPKKRWSIPELLQHPFLQIQ 633 (677)
T ss_pred HHhcCcccCCCcHHHhcCcccccc
Confidence 999999999999999999999985
No 57
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=99.98 E-value=3e-32 Score=292.08 Aligned_cols=212 Identities=16% Similarity=0.165 Sum_probs=152.6
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCC--------CCCCCHHHHHHHHHHHHHHHH
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP--------KRSVDVYECLHIFRQIVEIVY 135 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~--------~~~l~~~~~~~i~~QIl~aL~ 135 (720)
..+|..+|++++||||+++++ ++.... ...+|++|||.+++|.+++... ...+++..++.++.||+.||+
T Consensus 45 ~~~E~~~l~~l~h~niv~~~~-~~~~~~-~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~ 122 (317)
T cd07868 45 ACREIALLRELKHPNVISLQK-VFLSHA-DRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIH 122 (317)
T ss_pred HHHHHHHHHhcCCCCCcceee-eEecCC-CcEEEEEEeccCCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHH
Confidence 347888999999999999999 443322 2368999999888999988421 224899999999999999999
Q ss_pred HHHHCCceeccCCCCcEEE----ccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccc
Q 004989 136 AAHSQGIVVHNVRPSCFVM----SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQ 211 (720)
Q Consensus 136 yLHs~gIvHrDLKP~NILl----~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfg 211 (720)
|||++||+||||||+|||+ +..+.+||+|||++...+..... .
T Consensus 123 ~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~--------------------------------~- 169 (317)
T cd07868 123 YLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKP--------------------------------L- 169 (317)
T ss_pred HHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceeccCCCCcc--------------------------------c-
Confidence 9999999999999999999 45678999999987433211000 0
Q ss_pred cccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC-CCc
Q 004989 212 LVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSC 290 (720)
Q Consensus 212 la~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~ 290 (720)
.......||+.|+|||++.+.. ++.
T Consensus 170 ------------------------------------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~ 195 (317)
T cd07868 170 ------------------------------------------------------ADLDPVVVTFWYRAPELLLGARHYTK 195 (317)
T ss_pred ------------------------------------------------------cccCCccccccccCCHHHcCCCCcCc
Confidence 0001146899999999998754 899
Q ss_pred cccchhhhchhhhccc---cCCCCchH--------HHHHHHhhc----------------------------CCCCc-c-
Q 004989 291 ASDIYRLGVLLFELFC---PFSTGEEK--------TRTMSSLRH----------------------------RVLPP-Q- 329 (720)
Q Consensus 291 ~sDIwSLGvll~eLlt---pf~~~~~~--------~~~~~~l~~----------------------------~~~p~-~- 329 (720)
++|||||||++|||++ ||...... ...+..+.. ..... .
T Consensus 196 ~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (317)
T cd07868 196 AIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSL 275 (317)
T ss_pred hhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHHhcCCCChHHhHHHhhccchhhhhhhhhccccCcccc
Confidence 9999999999999999 55432110 000000000 00000 0
Q ss_pred -------ccccCchHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004989 330 -------LLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 330 -------~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
.....+...+||.+||++||.+|||++|+|+||||
T Consensus 276 ~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07868 276 IKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF 317 (317)
T ss_pred cchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 00011234589999999999999999999999998
No 58
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=99.98 E-value=2e-32 Score=294.84 Aligned_cols=205 Identities=19% Similarity=0.272 Sum_probs=162.4
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++..++||||+++++ ++.... .+|+|||| .+++|.+++.... .+++..++.++.||+.||.|||++||
T Consensus 42 ~~~E~~~l~~l~hp~i~~~~~-~~~~~~---~~~lv~E~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~i 116 (323)
T cd05595 42 TVTESRVLQNTRHPFLTALKY-AFQTHD---RLCFVMEYANGGELFFHLSRER-VFTEERARFYGAEIVSALEYLHSRDV 116 (323)
T ss_pred HHHHHHHHHhCCCCCCcceee-EEecCC---EEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 346778999999999999999 554443 67999999 8999999885443 58999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.+||+|||++........
T Consensus 117 vH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~---------------------------------------------- 150 (323)
T cd05595 117 VYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA---------------------------------------------- 150 (323)
T ss_pred EecCCCHHHEEEcCCCCEEecccHHhccccCCCC----------------------------------------------
Confidence 9999999999999999999999988732100000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......||+.|+|||++.+..++.++|||||||++|
T Consensus 151 --------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ 186 (323)
T cd05595 151 --------------------------------------------TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMY 186 (323)
T ss_pred --------------------------------------------ccccccCCcCcCCcccccCCCCCchhchhhhHHHHH
Confidence 000136899999999999888999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcC--CCCccccccCchHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC
Q 004989 303 ELFC---PFSTGEEKTRTMSSLRHR--VLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 367 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~--~~p~~~~~~~p~~~~Li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~ 367 (720)
||++ ||...... .....+... .+|. ...+...+||.+||..||.+|| ++.++++||||...
T Consensus 187 ell~g~~Pf~~~~~~-~~~~~~~~~~~~~p~---~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h~~~~~~ 257 (323)
T cd05595 187 EMMCGRLPFYNQDHE-RLFELILMEEIRFPR---TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSI 257 (323)
T ss_pred HHHhCCCCCCCCCHH-HHHHHHhcCCCCCCC---CCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcCCCcCCC
Confidence 9999 66654433 222222221 1222 2234556999999999999998 89999999999985
No 59
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=99.98 E-value=1.8e-32 Score=300.03 Aligned_cols=240 Identities=18% Similarity=0.262 Sum_probs=163.9
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..++.+++||||+++++ .+.+.. .+|+|||| .|++|.+++.+.+ .+++.+++.++.||+.||+|||++||+
T Consensus 49 ~~E~~il~~~~~~~iv~~~~-~~~~~~---~~~lv~E~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~lH~~giv 123 (363)
T cd05628 49 RAERDILVEADSLWVVKMFY-SFQDKL---NLYLIMEFLPGGDMMTLLMKKD-TLTEEETQFYIAETVLAIDSIHQLGFI 123 (363)
T ss_pred HHHHHHHHhCCCCCcceEEE-EEecCC---eEEEEEcCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeE
Confidence 35677899999999999999 555543 57999999 8999999995543 599999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.+||+|||++............... ....+ .++.+.......
T Consensus 124 HrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~~~~~~-------~~~~~------------~~~~~~~~~~~~---- 180 (363)
T cd05628 124 HRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNL-------NHSLP------------SDFTFQNMNSKR---- 180 (363)
T ss_pred ecCCCHHHeEECCCCCEEEeeccCcccccccccccccccc-------ccccc------------cccccccccccc----
Confidence 9999999999999999999999998654221100000000 00000 111000000000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
.. +.............+||+.|+|||++.+..++.++|||||||++||
T Consensus 181 -----------------------~~---------~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~e 228 (363)
T cd05628 181 -----------------------KA---------ETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYE 228 (363)
T ss_pred -----------------------cc---------chhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHH
Confidence 00 0000000000112579999999999999889999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcC----CCCccccccCchHHHHHHHcCCCCCC---CCCChHHHHcCcccCCC
Q 004989 304 LFC---PFSTGEEKTRTMSSLRHR----VLPPQLLLKFPKEASFCLWLLHPEPS---GRPKMGELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~----~~p~~~~~~~p~~~~Li~~~L~~dP~---~Rpta~eiL~hp~~~~~ 367 (720)
|++ ||...... ..+..+... .+|+. ....+...+||.+|+. +|. .||+++||++||||...
T Consensus 229 ll~G~~Pf~~~~~~-~~~~~i~~~~~~~~~p~~-~~~s~~~~~li~~l~~-~~~~r~~r~~~~ei~~hp~f~~~ 299 (363)
T cd05628 229 MLIGYPPFCSETPQ-ETYKKVMNWKETLIFPPE-VPISEKAKDLILRFCC-EWEHRIGAPGVEEIKTNPFFEGV 299 (363)
T ss_pred HHhCCCCCCCCCHH-HHHHHHHcCcCcccCCCc-CCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhCCCCCCCC
Confidence 999 66554433 333333321 12222 2234556699998775 444 45899999999999986
No 60
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.98 E-value=4.3e-32 Score=296.51 Aligned_cols=212 Identities=19% Similarity=0.230 Sum_probs=158.4
Q ss_pred hchhhhhhcccCCCCCceecccceeecCC---CCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEA---AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~---~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
+..+|..++..++||||+++++ ++.... ....+|++|||.+++|.+++.. .+++..+..++.||+.||.|||+
T Consensus 66 ~~~~E~~~l~~l~h~niv~~~~-~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~---~~~~~~~~~~~~qi~~~L~~LH~ 141 (359)
T cd07876 66 RAYRELVLLKCVNHKNIISLLN-VFTPQKSLEEFQDVYLVMELMDANLCQVIHM---ELDHERMSYLLYQMLCGIKHLHS 141 (359)
T ss_pred HHHHHHHHHHhCCCCCEeeeee-eeccCCCccccceeEEEEeCCCcCHHHHHhc---cCCHHHHHHHHHHHHHHHHHHHh
Confidence 4447888999999999999999 443332 2235799999977788887732 38899999999999999999999
Q ss_pred CCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCC
Q 004989 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||+||||||+|||++.++.+||+|||++...... .
T Consensus 142 ~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~~~-----------------------------------~--------- 177 (359)
T cd07876 142 AGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTN-----------------------------------F--------- 177 (359)
T ss_pred CCcccCCCCHHHEEECCCCCEEEecCCCccccccC-----------------------------------c---------
Confidence 99999999999999999999999999887321100 0
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhc
Q 004989 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
......||+.|+|||++.+..++.++|||||||
T Consensus 178 -----------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~ 210 (359)
T cd07876 178 -----------------------------------------------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 210 (359)
T ss_pred -----------------------------------------------cCCCCcccCCCCCchhccCCCCCcchhhHHHHH
Confidence 001136799999999999988999999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhh----------------------c-CCCCcc----cc-------------ccCch
Q 004989 300 LLFELFC---PFSTGEEKTRTMSSLR----------------------H-RVLPPQ----LL-------------LKFPK 336 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~----------------------~-~~~p~~----~~-------------~~~p~ 336 (720)
++|+|++ ||...+........+. . ...+.. .. ...+.
T Consensus 211 il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (359)
T cd07876 211 IMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQ 290 (359)
T ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchh
Confidence 9999999 6654432211100000 0 000000 00 01133
Q ss_pred HHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004989 337 EASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 337 ~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
..+||.+||.+||++|||+.|+|+||||.....
T Consensus 291 ~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~~~ 323 (359)
T cd07876 291 ARDLLSKMLVIDPDKRISVDEALRHPYITVWYD 323 (359)
T ss_pred HHHHHHHHhccCcccCCCHHHHhcCchhhhhcC
Confidence 459999999999999999999999999986433
No 61
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=99.98 E-value=3.2e-32 Score=293.46 Aligned_cols=208 Identities=18% Similarity=0.250 Sum_probs=162.6
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH-C
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-Q 140 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs-~ 140 (720)
+...|..++..++||||+++++ ++.... .+|+|||| .+++|.+++... ..+++..++.++.||+.||.|||+ .
T Consensus 41 ~~~~e~~~l~~~~hp~i~~~~~-~~~~~~---~~~lv~E~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~lH~~~ 115 (325)
T cd05594 41 HTLTENRVLQNSRHPFLTALKY-SFQTHD---RLCFVMEYANGGELFFHLSRE-RVFSEDRARFYGAEIVSALDYLHSEK 115 (325)
T ss_pred HHHHHHHHHHhCCCCCCCceEE-EEEcCC---EEEEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhcC
Confidence 4456777899999999999998 555443 67999999 899999988544 359999999999999999999998 7
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+|||++.++.+||+|||++....... .
T Consensus 116 ~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~---------------------------------~----------- 151 (325)
T cd05594 116 NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG---------------------------------A----------- 151 (325)
T ss_pred CEEecCCCCCeEEECCCCCEEEecCCCCeecCCCC---------------------------------c-----------
Confidence 99999999999999999999999999873211000 0
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhch
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
......||+.|+|||++.+..++.++|||||||+
T Consensus 152 ----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~i 185 (325)
T cd05594 152 ----------------------------------------------TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVV 185 (325)
T ss_pred ----------------------------------------------ccccccCCcccCCHHHHccCCCCCccccccccce
Confidence 0001368999999999998889999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC
Q 004989 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 367 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~ 367 (720)
+|||++ ||...... .....+...... ......+...+|+.+||.+||.+|+ ++.++++||||...
T Consensus 186 l~el~tG~~Pf~~~~~~-~~~~~i~~~~~~-~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~ 258 (325)
T cd05594 186 MYEMMCGRLPFYNQDHE-KLFELILMEEIR-FPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKFFAGI 258 (325)
T ss_pred eeeeccCCCCCCCCCHH-HHHHHHhcCCCC-CCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcCCCcCCC
Confidence 999999 66554432 233333222111 1112335566999999999999996 89999999999885
No 62
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=99.98 E-value=3.6e-32 Score=308.33 Aligned_cols=211 Identities=19% Similarity=0.252 Sum_probs=166.5
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~---~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
..+|..+|+.++|||||++++ ++..+. .+|+|||| .|++|.++|.. ...++++.++..++.||+.||.|||+
T Consensus 112 ~~~E~~~l~~l~Hpniv~~~~-~~~~~~---~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~ 187 (478)
T PTZ00267 112 ARSELHCLAACDHFGIVKHFD-DFKSDD---KLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHS 187 (478)
T ss_pred HHHHHHHHHhCCCCCEeEEEE-EEEECC---EEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 346788999999999999999 555443 68999999 89999998842 23458999999999999999999999
Q ss_pred CCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCC
Q 004989 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||+||||||+|||++.++.+||+|||++......... +
T Consensus 188 ~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~~-------------------------------~---------- 226 (478)
T PTZ00267 188 RKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSL-------------------------------D---------- 226 (478)
T ss_pred CCEEECCcCHHhEEECCCCcEEEEeCcCceecCCcccc-------------------------------c----------
Confidence 99999999999999999999999999987432110000 0
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhc
Q 004989 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
.....+||+.|+|||++.+..++.++|||||||
T Consensus 227 -----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~ 259 (478)
T PTZ00267 227 -----------------------------------------------VASSFCGTPYYLAPELWERKRYSKKADMWSLGV 259 (478)
T ss_pred -----------------------------------------------cccccCCCccccCHhHhCCCCCCcHHhHHHHHH
Confidence 001146899999999999888999999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 300 LLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
++|||++ ||...... ..+..+..+..++......+...+||.+||..||++||++.+++.|||+...
T Consensus 260 ~l~el~tg~~Pf~~~~~~-~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~~~~~~~ 329 (478)
T PTZ00267 260 ILYELLTLHRPFKGPSQR-EIMQQVLYGKYDPFPCPVSSGMKALLDPLLSKNPALRPTTQQLLHTEFLKYV 329 (478)
T ss_pred HHHHHHhCCCCCCCCCHH-HHHHHHHhCCCCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHhCHHHHHH
Confidence 9999999 66654443 3344444343333322334556799999999999999999999999998654
No 63
>PHA03212 serine/threonine kinase US3; Provisional
Probab=99.98 E-value=3.2e-32 Score=300.87 Aligned_cols=212 Identities=17% Similarity=0.171 Sum_probs=158.3
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCcee
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.+|+.+|++++|||||++++ ++.... ..+++||+.+++|.+++... ..+++.+++.|+.||+.||.|||++||||
T Consensus 131 ~~E~~il~~l~HpnIv~~~~-~~~~~~---~~~lv~e~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~ylH~~~IvH 205 (391)
T PHA03212 131 ATEAHILRAINHPSIIQLKG-TFTYNK---FTCLILPRYKTDLYCYLAAK-RNIAICDILAIERSVLRAIQYLHENRIIH 205 (391)
T ss_pred HHHHHHHHhCCCCCCCCEeE-EEEECC---eeEEEEecCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 47888999999999999999 554443 57999999778999998544 34899999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccc
Q 004989 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+|||++.++.++|+|||++....... .
T Consensus 206 rDiKP~NIll~~~~~vkL~DFG~a~~~~~~~---------------------------------~--------------- 237 (391)
T PHA03212 206 RDIKAENIFINHPGDVCLGDFGAACFPVDIN---------------------------------A--------------- 237 (391)
T ss_pred CCCChHhEEEcCCCCEEEEeCCccccccccc---------------------------------c---------------
Confidence 9999999999999999999999873210000 0
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhc
Q 004989 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 304 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eL 304 (720)
.......||+.|+|||++.+..++.++|||||||++|||
T Consensus 238 -----------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~el 276 (391)
T PHA03212 238 -----------------------------------------NKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEM 276 (391)
T ss_pred -----------------------------------------cccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHH
Confidence 000114789999999999988899999999999999999
Q ss_pred cc---cCCCCch------HHHHHHHhhc--CCCCcc-----------------------------c--cccCc-hHHHHH
Q 004989 305 FC---PFSTGEE------KTRTMSSLRH--RVLPPQ-----------------------------L--LLKFP-KEASFC 341 (720)
Q Consensus 305 lt---pf~~~~~------~~~~~~~l~~--~~~p~~-----------------------------~--~~~~p-~~~~Li 341 (720)
++ ||..... ....+..+.. +..|.. + ....| ...+||
T Consensus 277 ltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li 356 (391)
T PHA03212 277 ATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLI 356 (391)
T ss_pred HHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHH
Confidence 98 3332110 0001111100 000000 0 00112 345899
Q ss_pred HHcCCCCCCCCCChHHHHcCcccCCCccc
Q 004989 342 LWLLHPEPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 342 ~~~L~~dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
.+||++||.+|||+.|+|+||||.....+
T Consensus 357 ~~mL~~dP~~Rpta~elL~hp~f~~~~~~ 385 (391)
T PHA03212 357 CKMLAFDAHHRPSAEALLDFAAFQDIPDP 385 (391)
T ss_pred HHHhcCChhhCCCHHHHhcChhhccCCCC
Confidence 99999999999999999999999886443
No 64
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=99.98 E-value=3.9e-32 Score=297.27 Aligned_cols=245 Identities=16% Similarity=0.215 Sum_probs=165.8
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..+|..++||||+++++ .+.++. .+|+|||| .|++|.+++...+ .+++..++.|+.||+.||+|||++||
T Consensus 48 ~~~E~~il~~l~h~~iv~~~~-~~~~~~---~~~lv~E~~~~g~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~lH~~~i 122 (364)
T cd05599 48 VRAERDILAEADNPWVVKLYY-SFQDEN---YLYLIMEYLPGGDMMTLLMKKD-TFTEEETRFYIAETILAIDSIHKLGY 122 (364)
T ss_pred HHHHHHHHHhCCCCCCcceEE-EEEcCC---eEEEEECCCCCcHHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 336777999999999999999 555543 67999999 8999999995544 49999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.++|+|||++.............. .....+.+. .++........
T Consensus 123 vH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~-------~~~~~~~~~---------~~~~~~~~~~~---- 182 (364)
T cd05599 123 IHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFYRI-------LSHALPSNF---------LDFISKPMSSK---- 182 (364)
T ss_pred EeccCCHHHeEECCCCCEEEeecccceecccccccccccc-------ccccccccc---------ccccccccccc----
Confidence 9999999999999999999999999865322110000000 000000000 00000000000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
...+.............+||+.|+|||++.+..++.++|||||||++|
T Consensus 183 --------------------------------~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ 230 (364)
T cd05599 183 --------------------------------RKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMY 230 (364)
T ss_pred --------------------------------ccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHH
Confidence 000000000000001247999999999999888999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCCC---ccccccCchHHHHHHHcCCCCCCCCCC---hHHHHcCcccCCC
Q 004989 303 ELFC---PFSTGEEKTRTMSSLRHRVLP---PQLLLKFPKEASFCLWLLHPEPSGRPK---MGELLQSEFLNEP 367 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~~p---~~~~~~~p~~~~Li~~~L~~dP~~Rpt---a~eiL~hp~~~~~ 367 (720)
||++ ||...... .....+...... +......+...+||.+||. +|.+|++ +.++++||||+..
T Consensus 231 el~~G~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h~~~~~~ 302 (364)
T cd05599 231 EMLVGYPPFCSDNPQ-ETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSHPFFKGV 302 (364)
T ss_pred HhhcCCCCCCCCCHH-HHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcCCCcCCC
Confidence 9999 66554443 233333222111 1111233455699999996 9999997 9999999999986
No 65
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=99.98 E-value=1.6e-32 Score=295.22 Aligned_cols=204 Identities=16% Similarity=0.247 Sum_probs=159.7
Q ss_pred hhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 66 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.|..++..+ +||||+++++ ++.... .+|+|||| .|++|.+++.+.. .+++..++.++.||+.||.|||++||+
T Consensus 44 ~e~~~l~~~~~h~~iv~~~~-~~~~~~---~~~iv~Ey~~~g~L~~~i~~~~-~l~~~~~~~~~~ql~~~L~~lH~~~iv 118 (320)
T cd05590 44 TEKRILSLARNHPFLTQLYC-CFQTPD---RLFFVMEFVNGGDLMFHIQKSR-RFDEARARFYAAEITSALMFLHDKGII 118 (320)
T ss_pred HHHHHHHhccCCCchhceee-EEEcCC---EEEEEEcCCCCchHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeE
Confidence 455566554 7999999999 555443 57999999 8999999995543 499999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.++|+|||++....... .
T Consensus 119 H~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~---------------------------------~-------------- 151 (320)
T cd05590 119 YRDLKLDNVLLDHEGHCKLADFGMCKEGIFNG---------------------------------K-------------- 151 (320)
T ss_pred eCCCCHHHeEECCCCcEEEeeCCCCeecCcCC---------------------------------C--------------
Confidence 99999999999999999999999873210000 0
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......||+.|+|||++.+..++.++|||||||++||
T Consensus 152 -------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e 188 (320)
T cd05590 152 -------------------------------------------TTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYE 188 (320)
T ss_pred -------------------------------------------cccccccCccccCHHHHcCCCCCCccchhhhHHHHHH
Confidence 0011468999999999998889999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCCCccccc-cCchHHHHHHHcCCCCCCCCCCh------HHHHcCcccCCC
Q 004989 304 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPKM------GELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~~p~~~~~-~~p~~~~Li~~~L~~dP~~Rpta------~eiL~hp~~~~~ 367 (720)
|++ ||...... .....+...... ++. ..+...+|+.+||+.||.+||++ +++++||||...
T Consensus 189 l~~g~~Pf~~~~~~-~~~~~i~~~~~~--~~~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~f~~~ 259 (320)
T cd05590 189 MLCGHAPFEAENED-DLFEAILNDEVV--YPTWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFKEL 259 (320)
T ss_pred HhhCCCCCCCCCHH-HHHHHHhcCCCC--CCCCCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcCCCcCCC
Confidence 999 66655443 333344332211 112 23445699999999999999998 999999999875
No 66
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=99.98 E-value=2.6e-32 Score=300.08 Aligned_cols=251 Identities=12% Similarity=0.158 Sum_probs=166.1
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..+|.+++||||+++++ .+.++. .+|+|||| .|++|.++|.+.+ .+++..++.++.||+.||+|||++||
T Consensus 48 ~~~E~~il~~l~h~~iv~~~~-~~~~~~---~~~lv~E~~~~g~L~~~i~~~~-~~~~~~~~~~~~qi~~al~~lH~~~i 122 (376)
T cd05598 48 VKAERDILAEADNEWVVKLYY-SFQDKD---NLYFVMDYIPGGDMMSLLIRLG-IFEEDLARFYIAELTCAIESVHKMGF 122 (376)
T ss_pred HHHHHHHHHhCCCCCcceEEE-EEEcCC---EEEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 346778999999999999999 555443 68999999 8999999995544 48999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.++|+|||+|..+........+.. .+. .. ......
T Consensus 123 vHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~~~~~-------------------------~~~--~~--~~~~~~ 173 (376)
T cd05598 123 IHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQK-------------------------GDH--HR--QDSMEP 173 (376)
T ss_pred EeCCCCHHHEEECCCCCEEEEeCCCCcccccccccccccc-------------------------ccc--cc--cccccc
Confidence 9999999999999999999999999854421110000000 000 00 000000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
........ ....... ................+||+.|+|||++.+..++.++|||||||++|
T Consensus 174 ~~~~~~~~-------------~~~~~~~-----~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvily 235 (376)
T cd05598 174 SEEWSEID-------------RCRLKPL-----ERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILY 235 (376)
T ss_pred cccccccc-------------cccccch-----hhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceee
Confidence 00000000 0000000 00000000001112358999999999999988999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhc--CCCCccccccCchHHHHHHHcCCCCCCCCC---ChHHHHcCcccCCC
Q 004989 303 ELFC---PFSTGEEKTRTMSSLRH--RVLPPQLLLKFPKEASFCLWLLHPEPSGRP---KMGELLQSEFLNEP 367 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~--~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rp---ta~eiL~hp~~~~~ 367 (720)
||++ ||............... ....+......+...+||.+|+ .+|.+|+ ++.++++||||...
T Consensus 236 ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h~~~~~~ 307 (376)
T cd05598 236 EMLVGQPPFLADTPAETQLKVINWETTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKAHPFFKGI 307 (376)
T ss_pred ehhhCCCCCCCCCHHHHHHHHhccCccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCCCCcCCC
Confidence 9999 67655443222222211 1111122223455569999977 5999999 99999999999875
No 67
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=99.98 E-value=4.1e-32 Score=292.05 Aligned_cols=204 Identities=17% Similarity=0.250 Sum_probs=159.5
Q ss_pred hhhhhccc-CCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 66 SDGVELTH-GDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~L~~-l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.|..++.. .+||||+++++ ++.... .+|+|||| .+++|..++.+. ..+++..++.++.||+.||.|||++||+
T Consensus 44 ~e~~il~~~~~hp~i~~~~~-~~~~~~---~~~lv~E~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~iv 118 (321)
T cd05591 44 TEKRILALAAKHPFLTALHC-CFQTKD---RLFFVMEYVNGGDLMFQIQRS-RKFDEPRSRFYAAEVTLALMFLHRHGVI 118 (321)
T ss_pred HHHHHHHhccCCCCccceee-EEEcCC---eEEEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 45556654 48999999999 555543 57999999 899999998554 3489999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.++|+|||++.......
T Consensus 119 HrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~------------------------------------------------ 150 (321)
T cd05591 119 YRDLKLDNILLDAEGHCKLADFGMCKEGILNG------------------------------------------------ 150 (321)
T ss_pred ccCCCHHHeEECCCCCEEEeecccceecccCC------------------------------------------------
Confidence 99999999999999999999999873210000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
.......||+.|+|||++.+..++.++|||||||++||
T Consensus 151 ------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~e 188 (321)
T cd05591 151 ------------------------------------------VTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYE 188 (321)
T ss_pred ------------------------------------------ccccccccCccccCHHHHcCCCCCCccceechhHHHHH
Confidence 00011468999999999998889999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCC-CCccccccCchHHHHHHHcCCCCCCCCC-------ChHHHHcCcccCCC
Q 004989 304 LFC---PFSTGEEKTRTMSSLRHRV-LPPQLLLKFPKEASFCLWLLHPEPSGRP-------KMGELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~-~p~~~~~~~p~~~~Li~~~L~~dP~~Rp-------ta~eiL~hp~~~~~ 367 (720)
|++ ||...... .....+.... ..|. ...+...+|+.+||+.||++|| ++.++++||||...
T Consensus 189 l~tg~~Pf~~~~~~-~~~~~i~~~~~~~p~--~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~~~~~ 260 (321)
T cd05591 189 MMAGQPPFEADNED-DLFESILHDDVLYPV--WLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPFFKEI 260 (321)
T ss_pred HhcCCCCCCCCCHH-HHHHHHHcCCCCCCC--CCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCCccCCC
Confidence 999 67655544 3333333322 1121 1224456999999999999999 89999999999764
No 68
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.98 E-value=7.6e-32 Score=295.11 Aligned_cols=212 Identities=20% Similarity=0.230 Sum_probs=159.9
Q ss_pred hchhhhhhcccCCCCCceecccceeecCC---CCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEA---AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~---~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
+..+|..++..++||||+++++ ++.... ....+|+||||.+++|.+++.. .+++..++.++.||+.||.|||+
T Consensus 69 ~~~~E~~~l~~l~h~~ii~~~~-~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~ 144 (364)
T cd07875 69 RAYRELVLMKCVNHKNIIGLLN-VFTPQKSLEEFQDVYIVMELMDANLCQVIQM---ELDHERMSYLLYQMLCGIKHLHS 144 (364)
T ss_pred HHHHHHHHHHhcCCCCccccce-eecccccccccCeEEEEEeCCCCCHHHHHHh---cCCHHHHHHHHHHHHHHHHHHhh
Confidence 4447888999999999999999 443322 2235799999977789998843 38899999999999999999999
Q ss_pred CCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCC
Q 004989 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||+||||||+|||++.++.+||+|||++...+...
T Consensus 145 ~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~-------------------------------------------- 180 (364)
T cd07875 145 AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-------------------------------------------- 180 (364)
T ss_pred CCeecCCCCHHHEEECCCCcEEEEeCCCccccCCCC--------------------------------------------
Confidence 999999999999999999999999999874321110
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhc
Q 004989 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
......||+.|+|||++.+..++.++|||||||
T Consensus 181 -----------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~ 213 (364)
T cd07875 181 -----------------------------------------------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 213 (364)
T ss_pred -----------------------------------------------cccCCcccCCcCCHHHHhCCCCCchhhHHhHHH
Confidence 001136799999999999988999999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcCCC-Ccc-------------------------------c--------cccCch
Q 004989 300 LLFELFC---PFSTGEEKTRTMSSLRHRVL-PPQ-------------------------------L--------LLKFPK 336 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~~~~-p~~-------------------------------~--------~~~~p~ 336 (720)
++|||++ ||............+..... ++. . ....+.
T Consensus 214 il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (364)
T cd07875 214 IMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQ 293 (364)
T ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHH
Confidence 9999999 67654433221111110000 000 0 001123
Q ss_pred HHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004989 337 EASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 337 ~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
..+||.+||+.||.+|||+.|+|+||||....+
T Consensus 294 ~~dll~~mL~~dP~~R~t~~e~L~hp~~~~~~~ 326 (364)
T cd07875 294 ARDLLSKMLVIDASKRISVDEALQHPYINVWYD 326 (364)
T ss_pred HHHHHHHhcCcCcccCCCHHHHhcCcccccccC
Confidence 459999999999999999999999999986433
No 69
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=99.98 E-value=1.4e-31 Score=304.14 Aligned_cols=221 Identities=19% Similarity=0.240 Sum_probs=169.9
Q ss_pred chhhchhhhhhcccCCCCCceecccceeecCC----CCCcEEEEEec-CCCCHHHHHhC---CCCCCCHHHHHHHHHHHH
Q 004989 60 FELRKHSDGVELTHGDHLRNQGGLSGVCENEA----AIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIV 131 (720)
Q Consensus 60 ~~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~----~~~~~~lv~E~-~ggsL~~~L~~---~~~~l~~~~~~~i~~QIl 131 (720)
...+..+|..+|..++|+||+++++.+..... ....+++|||| .+++|.++|.. ....+++..+..++.||+
T Consensus 74 ~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll 153 (496)
T PTZ00283 74 DKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVL 153 (496)
T ss_pred HHHHHHHHHHHHhcCCCCcEEEeecceecccccCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHH
Confidence 33455678889999999999999884432221 12247899999 99999999943 234689999999999999
Q ss_pred HHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccc
Q 004989 132 EIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQ 211 (720)
Q Consensus 132 ~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfg 211 (720)
.||.|||++||+||||||+|||++.++.+||+|||+++........ +
T Consensus 154 ~aL~~lH~~~IiHrDLKP~NILl~~~~~vkL~DFGls~~~~~~~~~-------------------------------~-- 200 (496)
T PTZ00283 154 LAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDFGFSKMYAATVSD-------------------------------D-- 200 (496)
T ss_pred HHHHHHHhCCEecCCCCHHHEEEeCCCCEEEEecccCeeccccccc-------------------------------c--
Confidence 9999999999999999999999999999999999987443211000 0
Q ss_pred cccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCcc
Q 004989 212 LVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCA 291 (720)
Q Consensus 212 la~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~ 291 (720)
.....+||+.|+|||++.+..++.+
T Consensus 201 -------------------------------------------------------~~~~~~Gt~~Y~aPE~~~~~~~s~k 225 (496)
T PTZ00283 201 -------------------------------------------------------VGRTFCGTPYYVAPEIWRRKPYSKK 225 (496)
T ss_pred -------------------------------------------------------ccccccCCcceeCHHHhCCCCCCcH
Confidence 0011468999999999999889999
Q ss_pred ccchhhhchhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004989 292 SDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 292 sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
+|||||||++|||++ ||...... ..+..+..+..++......+...+|+.+||+.||.+||++.++++|||++...
T Consensus 226 ~DVwSlGvilyeLltG~~Pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~p~~~~~~ 304 (496)
T PTZ00283 226 ADMFSLGVLLYELLTLKRPFDGENME-EVMHKTLAGRYDPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNMPICKLFI 304 (496)
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCHH-HHHHHHhcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhCHHHHHhh
Confidence 999999999999999 67655443 33333333333333233345566999999999999999999999999988754
Q ss_pred c
Q 004989 369 D 369 (720)
Q Consensus 369 ~ 369 (720)
.
T Consensus 305 ~ 305 (496)
T PTZ00283 305 S 305 (496)
T ss_pred h
Confidence 3
No 70
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.98 E-value=5.2e-32 Score=292.60 Aligned_cols=207 Identities=18% Similarity=0.191 Sum_probs=160.1
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ- 140 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~- 140 (720)
+..+|..+|.+++||||+++++ ++..+. .+++|||| .+++|.+++.... .+++..+..++.||+.||.|||++
T Consensus 49 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~ 123 (331)
T cd06649 49 QIIRELQVLHECNSPYIVGFYG-AFYSDG---EISICMEHMDGGSLDQVLKEAK-RIPEEILGKVSIAVLRGLAYLREKH 123 (331)
T ss_pred HHHHHHHHHHHCCCCCCCeEEE-EEEECC---EEEEEeecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHhhcC
Confidence 4557888999999999999999 444443 57999999 8999999995543 489999999999999999999986
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
+|+||||||+|||++.++.++|+|||++......
T Consensus 124 ~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~---------------------------------------------- 157 (331)
T cd06649 124 QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---------------------------------------------- 157 (331)
T ss_pred CEEcCCCChhhEEEcCCCcEEEccCccccccccc----------------------------------------------
Confidence 6999999999999999999999998877322100
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhch
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
......||+.|+|||++.+..++.++|||||||+
T Consensus 158 ----------------------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~i 191 (331)
T cd06649 158 ----------------------------------------------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLS 191 (331)
T ss_pred ----------------------------------------------ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHH
Confidence 0001367999999999998889999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhh----------------------------------------------cCCCCcccc
Q 004989 301 LFELFC---PFSTGEEKTRTMSSLR----------------------------------------------HRVLPPQLL 331 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~----------------------------------------------~~~~p~~~~ 331 (720)
+|||++ ||...... .....+. ....+....
T Consensus 192 l~el~tg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (331)
T cd06649 192 LVELAIGRYPIPPPDAK-ELEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPN 270 (331)
T ss_pred HHHHHhCCCCCCCCCHH-HHHHHhcccccccccCCccccCcccccccccccccccccccchhHHHHHHHHHhCCCcCCCC
Confidence 999999 66543221 1111111 111111111
Q ss_pred -ccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 332 -LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 332 -~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
...++..+||.+||.+||++|||+.+||+||||+..
T Consensus 271 ~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~~~ 307 (331)
T cd06649 271 GVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFIKRS 307 (331)
T ss_pred ccccHHHHHHHHHHccCCcccCCCHHHHhcChHHhhc
Confidence 123455699999999999999999999999999865
No 71
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=99.98 E-value=3.4e-32 Score=295.25 Aligned_cols=212 Identities=15% Similarity=0.203 Sum_probs=159.6
Q ss_pred hchhhhhhcccCCCCCceecccceeecC--CCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENE--AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~--~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+..+|..+|.+++||||+++++++.... .....+|++||+.+++|.+++.. ..+++..++.++.||+.||.|||++
T Consensus 60 ~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~ 137 (343)
T cd07878 60 RTYRELRLLKHMKHENVIGLLDVFTPATSIENFNEVYLVTNLMGADLNNIVKC--QKLSDEHVQFLIYQLLRGLKYIHSA 137 (343)
T ss_pred HHHHHHHHHHhcCCCchhhhhhhhcccccccccCcEEEEeecCCCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 3447888999999999999999433221 22245799999999999998853 2499999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+|||++.++.+||+|||++......
T Consensus 138 ~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~---------------------------------------------- 171 (343)
T cd07878 138 GIIHRDLKPSNVAVNEDCELRILDFGLARQADDE---------------------------------------------- 171 (343)
T ss_pred CeecccCChhhEEECCCCCEEEcCCccceecCCC----------------------------------------------
Confidence 9999999999999999999999988877321100
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC-CCCCccccchhhhc
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGV 299 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sDIwSLGv 299 (720)
....+||++|+|||++.+ ..++.++|||||||
T Consensus 172 -----------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~ 204 (343)
T cd07878 172 -----------------------------------------------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 204 (343)
T ss_pred -----------------------------------------------cCCccccccccCchHhcCCccCCchhhhHhHHH
Confidence 001367999999999977 45899999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhc--CCC-----------------------Cc-----cccccCchHHHHHHHcCC
Q 004989 300 LLFELFC---PFSTGEEKTRTMSSLRH--RVL-----------------------PP-----QLLLKFPKEASFCLWLLH 346 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~--~~~-----------------------p~-----~~~~~~p~~~~Li~~~L~ 346 (720)
++|+|++ ||........ ...+.. +.. +. .+....+...+|+.+||+
T Consensus 205 il~el~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~ 283 (343)
T cd07878 205 IMAELLKGKALFPGNDYIDQ-LKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLV 283 (343)
T ss_pred HHHHHHHCCCCCCCCCHHHH-HHHHHHHhCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcC
Confidence 9999999 5654332211 111110 000 00 011122344599999999
Q ss_pred CCCCCCCChHHHHcCcccCCCccc
Q 004989 347 PEPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 347 ~dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
+||.+|||+.|+|+||||.....+
T Consensus 284 ~dp~~R~s~~ell~hp~~~~~~~~ 307 (343)
T cd07878 284 LDSDKRISASEALAHPYFSQYHDP 307 (343)
T ss_pred CChhhCCCHHHHhcCcchhccCCC
Confidence 999999999999999999886443
No 72
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=99.98 E-value=3.5e-32 Score=299.33 Aligned_cols=255 Identities=13% Similarity=0.140 Sum_probs=165.1
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++.+++|||||++++ ++.+.. .+|+|||| .|++|.+++... ..+++..++.++.||+.||+|||++|
T Consensus 47 ~~~~E~~il~~l~hp~iv~~~~-~~~~~~---~~~lv~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~ql~~aL~~LH~~g 121 (377)
T cd05629 47 HVKAERDVLAESDSPWVVSLYY-SFQDAQ---YLYLIMEFLPGGDLMTMLIKY-DTFSEDVTRFYMAECVLAIEAVHKLG 121 (377)
T ss_pred HHHHHHHHHHhCCCCCcceEEE-EEEcCC---eeEEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3346777899999999999999 555543 67999999 899999999554 45899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.++|+|||++..+............ .......+. .+ ...+...
T Consensus 122 ivHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~-~~~~~~~~~--~~----------~~~~~~~------- 181 (377)
T cd05629 122 FIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAYYQKL-LQGKSNKNR--ID----------NRNSVAV------- 181 (377)
T ss_pred eeccCCCHHHEEECCCCCEEEeeccccccccccccccccccc-ccccccccc--cc----------ccccccc-------
Confidence 999999999999999999999999998643221100000000 000000000 00 0000000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
...+ .... ......+.+ ..........+||+.|+|||++.+..++.++|||||||++
T Consensus 182 ~~~~----~~~~---------~~~~~~~~~----------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil 238 (377)
T cd05629 182 DSIN----LTMS---------SKDQIATWK----------KNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIM 238 (377)
T ss_pred cccc----cccc---------chhhhhhhh----------hcccccccccCCCccccCHHHHccCCCCCceeeEecchhh
Confidence 0000 0000 000000000 0000011125799999999999988899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCC---CCccccccCchHHHHHHHcCCCCCCCC---CChHHHHcCcccCCC
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRHRV---LPPQLLLKFPKEASFCLWLLHPEPSGR---PKMGELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~---~p~~~~~~~p~~~~Li~~~L~~dP~~R---pta~eiL~hp~~~~~ 367 (720)
|||++ ||...... ..+..+.... ..|......+...+||.+||. +|.+| +++.|+++||||...
T Consensus 239 ~elltG~~Pf~~~~~~-~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~hp~~~~~ 311 (377)
T cd05629 239 FECLIGWPPFCSENSH-ETYRKIINWRETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSHPFFRGV 311 (377)
T ss_pred hhhhcCCCCCCCCCHH-HHHHHHHccCCccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcCCCcCCC
Confidence 99999 66554433 2333332211 111111233556699999997 77765 599999999999875
No 73
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=99.97 E-value=4.8e-32 Score=292.55 Aligned_cols=210 Identities=16% Similarity=0.184 Sum_probs=162.3
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
...+|..++..++||||+++++ ++.+.. .+|+|||| .|++|.+++.+....+++..++.++.||+.||.|||++|
T Consensus 47 ~~~~e~~i~~~~~~~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ 122 (330)
T cd05601 47 FFEEERDILSISNSPWIPQLQY-AFQDKD---NLYLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMG 122 (330)
T ss_pred HHHHHHHHHHhCCCCCCcceee-EEecCC---eEEEEECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3446677888999999999998 555443 57999999 899999999665556999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||++.........
T Consensus 123 i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~-------------------------------------------- 158 (330)
T cd05601 123 YVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMV-------------------------------------------- 158 (330)
T ss_pred eEcccCchHheEECCCCCEEeccCCCCeECCCCCce--------------------------------------------
Confidence 999999999999999999999999987432111000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCccccc------CCCCCccccch
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA------GAPVSCASDIY 295 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~------~~~~s~~sDIw 295 (720)
......||+.|+|||++. +..++.++|||
T Consensus 159 ---------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Diw 193 (330)
T cd05601 159 ---------------------------------------------NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWW 193 (330)
T ss_pred ---------------------------------------------eeecccCCccccCHHHhccccccccCCCCCcceee
Confidence 001136899999999986 44578999999
Q ss_pred hhhchhhhccc---cCCCCchHHHHHHHhhcCCC---CccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 296 RLGVLLFELFC---PFSTGEEKTRTMSSLRHRVL---PPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 296 SLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~---p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
||||++|||++ ||...... ..+..+..... .+......+...+|+.+||. +|.+|||+.++++||||...
T Consensus 194 slG~il~el~~g~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h~~~~~~ 269 (330)
T cd05601 194 SLGVIAYEMIYGRSPFHEGTSA-KTYNNIMNFQRFLKFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCHPFFSKI 269 (330)
T ss_pred cccceeeeeccCCCCCCCCCHH-HHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCCCCcCCC
Confidence 99999999999 66654443 23333332211 11112233455699999998 99999999999999999875
No 74
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=99.97 E-value=4.2e-32 Score=296.11 Aligned_cols=214 Identities=19% Similarity=0.218 Sum_probs=159.7
Q ss_pred hhchhhhhhcccCCCCCceecccceeecC--CCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004989 62 LRKHSDGVELTHGDHLRNQGGLSGVCENE--AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 62 ~r~~~e~~~L~~l~HpnIV~l~~~~~~~~--~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
.+..+|..++..++||||+++++.+.... .....+|++|||.+++|.+++.. .+++..++.++.||+.||.|||+
T Consensus 61 ~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~---~l~~~~~~~~~~qi~~aL~~LH~ 137 (355)
T cd07874 61 KRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIQM---ELDHERMSYLLYQMLCGIKHLHS 137 (355)
T ss_pred HHHHHHHHHHHHhCCCchhceeeeeeccccccccceeEEEhhhhcccHHHHHhh---cCCHHHHHHHHHHHHHHHHHHHh
Confidence 34557888999999999999999433222 12235799999977788888843 38899999999999999999999
Q ss_pred CCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCC
Q 004989 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||+||||||+|||++.++.+||+|||+++..+...
T Consensus 138 ~givHrDikp~Nill~~~~~~kl~Dfg~~~~~~~~~-------------------------------------------- 173 (355)
T cd07874 138 AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-------------------------------------------- 173 (355)
T ss_pred CCcccCCCChHHEEECCCCCEEEeeCcccccCCCcc--------------------------------------------
Confidence 999999999999999999999999998874321110
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhc
Q 004989 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
......||+.|+|||++.+..++.++|||||||
T Consensus 174 -----------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~ 206 (355)
T cd07874 174 -----------------------------------------------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 206 (355)
T ss_pred -----------------------------------------------ccCCccccCCccCHHHHcCCCCCchhhHHHHHH
Confidence 001136799999999999888999999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhc----------------------C------CCCccc-----------cc-cCch
Q 004989 300 LLFELFC---PFSTGEEKTRTMSSLRH----------------------R------VLPPQL-----------LL-KFPK 336 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~----------------------~------~~p~~~-----------~~-~~p~ 336 (720)
++|+|++ ||............+.. . .++..+ .. ....
T Consensus 207 il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (355)
T cd07874 207 IMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQ 286 (355)
T ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchH
Confidence 9999999 66554322111111100 0 000000 00 1123
Q ss_pred HHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004989 337 EASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 337 ~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
..+||.+||.+||++|||+.|+|+||||....+
T Consensus 287 ~~~li~~mL~~dP~~Rps~~ell~hp~~~~~~~ 319 (355)
T cd07874 287 ARDLLSKMLVIDPAKRISVDEALQHPYINVWYD 319 (355)
T ss_pred HHHHHHHHhcCCchhcCCHHHHhcCcchhcccC
Confidence 459999999999999999999999999986544
No 75
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=99.97 E-value=1.1e-31 Score=283.24 Aligned_cols=204 Identities=20% Similarity=0.257 Sum_probs=150.5
Q ss_pred hcccCCCCCceecccceeec-CCCCCcEEEEEecCCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccC
Q 004989 70 ELTHGDHLRNQGGLSGVCEN-EAAIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 147 (720)
Q Consensus 70 ~L~~l~HpnIV~l~~~~~~~-~~~~~~~~lv~E~~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDL 147 (720)
.|.+++||||+++++.+... ......++++|||..++|.+++.. ....+++.+++.++.||+.||.|||++||+||||
T Consensus 55 ~l~~~~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~di 134 (288)
T cd07863 55 RLEAFDHPNIVRLMDVCATSRTDRETKVTLVFEHVDQDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDL 134 (288)
T ss_pred HhhhcCCCCeeeeeeeeccccCCCCceEEEEEcccccCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCC
Confidence 34556899999999943322 223446899999966799999854 3345899999999999999999999999999999
Q ss_pred CCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccccccc
Q 004989 148 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 227 (720)
Q Consensus 148 KP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q 227 (720)
||+|||++.++.+||+|||++.......
T Consensus 135 kp~Nili~~~~~~kl~dfg~~~~~~~~~---------------------------------------------------- 162 (288)
T cd07863 135 KPENILVTSGGQVKLADFGLARIYSCQM---------------------------------------------------- 162 (288)
T ss_pred CHHHEEECCCCCEEECccCccccccCcc----------------------------------------------------
Confidence 9999999999999999988773321100
Q ss_pred CCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhccc-
Q 004989 228 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 306 (720)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt- 306 (720)
......||+.|+|||++.+..++.++|||||||++|||++
T Consensus 163 ---------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g 203 (288)
T cd07863 163 ---------------------------------------ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRR 203 (288)
T ss_pred ---------------------------------------cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhC
Confidence 0011357899999999998889999999999999999998
Q ss_pred --cCCCCchHHHHHHHhhc-----------------CCCCc-------cccccCc-hHHHHHHHcCCCCCCCCCChHHHH
Q 004989 307 --PFSTGEEKTRTMSSLRH-----------------RVLPP-------QLLLKFP-KEASFCLWLLHPEPSGRPKMGELL 359 (720)
Q Consensus 307 --pf~~~~~~~~~~~~l~~-----------------~~~p~-------~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL 359 (720)
||............+.. ..+.+ ......+ ...+|+.+||++||.+|||+.|++
T Consensus 204 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l 283 (288)
T cd07863 204 KPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRAL 283 (288)
T ss_pred CcCcCCCCHHHHHHHHHHHhCCCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHh
Confidence 44433322111111110 00000 0111222 335999999999999999999999
Q ss_pred cCccc
Q 004989 360 QSEFL 364 (720)
Q Consensus 360 ~hp~~ 364 (720)
.||||
T Consensus 284 ~hp~f 288 (288)
T cd07863 284 QHPFF 288 (288)
T ss_pred cCCCC
Confidence 99998
No 76
>PTZ00036 glycogen synthase kinase; Provisional
Probab=99.97 E-value=5e-32 Score=303.94 Aligned_cols=214 Identities=14% Similarity=0.199 Sum_probs=157.7
Q ss_pred hhhhhhcccCCCCCceecccceeec----CCCCCcEEEEEecCCCCHHHHHh---CCCCCCCHHHHHHHHHHHHHHHHHH
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCEN----EAAIDPFVHAIEWGDVSLRQWLD---KPKRSVDVYECLHIFRQIVEIVYAA 137 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~----~~~~~~~~lv~E~~ggsL~~~L~---~~~~~l~~~~~~~i~~QIl~aL~yL 137 (720)
.+|..+|..++|||||++++.++.. ......+++||||.+++|.+++. .....+++..++.++.||+.||.||
T Consensus 107 ~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l~lvmE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yL 186 (440)
T PTZ00036 107 NRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYI 186 (440)
T ss_pred HHHHHHHHhcCCCCCcceeeeEeecccccCCCceEEEEEEecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 3688899999999999998844322 12223578999997778988873 2445699999999999999999999
Q ss_pred HHCCceeccCCCCcEEEccCC-ceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCC
Q 004989 138 HSQGIVVHNVRPSCFVMSSFN-HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 216 (720)
Q Consensus 138 Hs~gIvHrDLKP~NILl~~~~-~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~ 216 (720)
|++||+||||||+|||++.++ .+||+|||+++......
T Consensus 187 H~~~IiHrDLKp~NILl~~~~~~vkL~DFGla~~~~~~~----------------------------------------- 225 (440)
T PTZ00036 187 HSKFICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLLAGQ----------------------------------------- 225 (440)
T ss_pred HHCCEecCCcCHHHEEEcCCCCceeeeccccchhccCCC-----------------------------------------
Confidence 999999999999999998665 69999988874321000
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC-CCCccccch
Q 004989 217 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIY 295 (720)
Q Consensus 217 ~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIw 295 (720)
......||+.|+|||++.+. .|+.++|||
T Consensus 226 --------------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~Diw 255 (440)
T PTZ00036 226 --------------------------------------------------RSVSYICSRFYRAPELMLGATNYTTHIDLW 255 (440)
T ss_pred --------------------------------------------------CcccCCCCcCccCHHHhcCCCCCCcHHHHH
Confidence 00114679999999998765 489999999
Q ss_pred hhhchhhhccc---cCCCCchHHHHHHHhhcC------------------CCCc----c----ccccC-chHHHHHHHcC
Q 004989 296 RLGVLLFELFC---PFSTGEEKTRTMSSLRHR------------------VLPP----Q----LLLKF-PKEASFCLWLL 345 (720)
Q Consensus 296 SLGvll~eLlt---pf~~~~~~~~~~~~l~~~------------------~~p~----~----~~~~~-p~~~~Li~~~L 345 (720)
||||++|||++ ||.+..........+... .+|. . ++... ++..+||.+||
T Consensus 256 SlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L 335 (440)
T PTZ00036 256 SLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFL 335 (440)
T ss_pred HHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHC
Confidence 99999999999 555443322222111100 0111 0 11122 34459999999
Q ss_pred CCCCCCCCChHHHHcCcccCCCcc
Q 004989 346 HPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 346 ~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
.+||.+|||+.|+|+||||....+
T Consensus 336 ~~dP~~R~ta~e~l~hp~f~~~~~ 359 (440)
T PTZ00036 336 KYEPLKRLNPIEALADPFFDDLRD 359 (440)
T ss_pred CCChhHCcCHHHHhCChhHHhhhc
Confidence 999999999999999999987643
No 77
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=99.97 E-value=7e-32 Score=296.26 Aligned_cols=206 Identities=16% Similarity=0.211 Sum_probs=160.3
Q ss_pred hhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCcee
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|..++.+++||||+++++ ++.++. .+|+|||| .|++|.+++... .+++..+..++.||+.||.|||++||+|
T Consensus 92 ~e~~il~~~~h~~iv~~~~-~~~~~~---~~~lv~Ey~~gg~L~~~l~~~--~l~~~~~~~~~~qi~~aL~~LH~~~ivH 165 (370)
T cd05596 92 EERDIMAHANSEWIVQLHY-AFQDDK---YLYMVMEYMPGGDLVNLMSNY--DIPEKWARFYTAEVVLALDAIHSMGFIH 165 (370)
T ss_pred HHHHHHHhCCCCCcceEEE-EEecCC---EEEEEEcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 5677899999999999998 555543 68999999 899999998543 3899999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccc
Q 004989 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+|||++.++.+||+|||.+........ .
T Consensus 166 rDLkp~NILl~~~~~~kL~DfG~~~~~~~~~~---------------------------------~-------------- 198 (370)
T cd05596 166 RDVKPDNMLLDKSGHLKLADFGTCMKMDANGM---------------------------------V-------------- 198 (370)
T ss_pred cCCCHHHEEEcCCCCEEEEeccceeeccCCCc---------------------------------c--------------
Confidence 99999999999999999999998743211100 0
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC----CCCccccchhhhch
Q 004989 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA----PVSCASDIYRLGVL 300 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~----~~s~~sDIwSLGvl 300 (720)
.....+||+.|+|||++.+. .++.++|||||||+
T Consensus 199 ------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvi 236 (370)
T cd05596 199 ------------------------------------------RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVF 236 (370)
T ss_pred ------------------------------------------cCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHH
Confidence 00114689999999998654 37899999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCC---ccccccCchHHHHHHHcCCCCCCC--CCChHHHHcCcccCCC
Q 004989 301 LFELFC---PFSTGEEKTRTMSSLRHRVLP---PQLLLKFPKEASFCLWLLHPEPSG--RPKMGELLQSEFLNEP 367 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p---~~~~~~~p~~~~Li~~~L~~dP~~--Rpta~eiL~hp~~~~~ 367 (720)
+|||++ ||...... ..+..+...... +......+...+||.+||..+|.+ |+++.++++||||+..
T Consensus 237 lyelltG~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~~~~~~ 310 (370)
T cd05596 237 LYEMLVGDTPFYADSLV-GTYSKIMDHKNSLTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSHPFFKND 310 (370)
T ss_pred HHHHHhCCCCcCCCCHH-HHHHHHHcCCCcCCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcCcccCCC
Confidence 999999 66654443 333444332211 111122344559999999999987 9999999999999874
No 78
>PHA03209 serine/threonine kinase US3; Provisional
Probab=99.97 E-value=6.1e-32 Score=295.26 Aligned_cols=206 Identities=18% Similarity=0.200 Sum_probs=156.1
Q ss_pred hhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceec
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 145 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHr 145 (720)
.|..+|.+++||||+++++ ++.... ..++|||+..++|.+++......+++.+++.|+.||+.||.|||++|||||
T Consensus 106 ~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHr 181 (357)
T PHA03209 106 IEAMLLQNVNHPSVIRMKD-TLVSGA---ITCMVLPHYSSDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHR 181 (357)
T ss_pred HHHHHHHhCCCCCCcChhh-eEEeCC---eeEEEEEccCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecC
Confidence 5788999999999999999 444443 578999997789999996666679999999999999999999999999999
Q ss_pred cCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccccc
Q 004989 146 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 225 (720)
Q Consensus 146 DLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~ 225 (720)
||||+|||++.++.++|+|||.+.......
T Consensus 182 Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~-------------------------------------------------- 211 (357)
T PHA03209 182 DVKTENIFINDVDQVCIGDLGAAQFPVVAP-------------------------------------------------- 211 (357)
T ss_pred CCCHHHEEECCCCCEEEecCccccccccCc--------------------------------------------------
Confidence 999999999999999999998873210000
Q ss_pred ccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhcc
Q 004989 226 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 305 (720)
Q Consensus 226 ~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLl 305 (720)
......||+.|+|||++.+..++.++|||||||++|||+
T Consensus 212 -----------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell 250 (357)
T PHA03209 212 -----------------------------------------AFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEML 250 (357)
T ss_pred -----------------------------------------ccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHH
Confidence 000135799999999999888999999999999999999
Q ss_pred c----cCCCCchH---------HHHHHHhhc-CCCCcccc-------------------------------ccCchHHHH
Q 004989 306 C----PFSTGEEK---------TRTMSSLRH-RVLPPQLL-------------------------------LKFPKEASF 340 (720)
Q Consensus 306 t----pf~~~~~~---------~~~~~~l~~-~~~p~~~~-------------------------------~~~p~~~~L 340 (720)
+ +|...... ......+.. +..|..+. .......+|
T Consensus 251 ~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 330 (357)
T PHA03209 251 AYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFL 330 (357)
T ss_pred HcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHH
Confidence 7 22221100 011111111 11111111 011223479
Q ss_pred HHHcCCCCCCCCCChHHHHcCcccCC
Q 004989 341 CLWLLHPEPSGRPKMGELLQSEFLNE 366 (720)
Q Consensus 341 i~~~L~~dP~~Rpta~eiL~hp~~~~ 366 (720)
|.+||++||.+|||+.|+|+||||+.
T Consensus 331 i~~mL~~dP~~Rpta~e~l~hp~f~~ 356 (357)
T PHA03209 331 VHKMLTFDAAMRPSAEEILNYPMFAQ 356 (357)
T ss_pred HHHHHcCCcccCcCHHHHhcCchhcc
Confidence 99999999999999999999999985
No 79
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=99.97 E-value=8.4e-32 Score=290.82 Aligned_cols=207 Identities=17% Similarity=0.257 Sum_probs=158.6
Q ss_pred hhhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 65 HSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
.+|..++..+ +||||+++++ ++.+.. .+|++||| .|++|.+++.+. ..+++..++.++.||+.||.|||++||
T Consensus 43 ~~e~~il~~~~~hp~Iv~~~~-~~~~~~---~~~lv~e~~~~g~L~~~~~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~i 117 (329)
T cd05588 43 QTEKHVFETASNHPFLVGLHS-CFQTES---RLFFVIEFVSGGDLMFHMQRQ-RKLPEEHARFYSAEISLALNFLHERGI 117 (329)
T ss_pred HHHHHHHHhccCCCCCCceEE-EEEcCC---EEEEEEeCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 3566677776 7999999999 555543 67999999 899999998544 359999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.+||+|||++...-.. .+
T Consensus 118 vH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~---------------------------------~~------------- 151 (329)
T cd05588 118 IYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRP---------------------------------GD------------- 151 (329)
T ss_pred EecCCCHHHeEECCCCCEEECcCccccccccC---------------------------------CC-------------
Confidence 99999999999999999999999887321000 00
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
.....+||+.|+|||++.+..++.++|||||||++|
T Consensus 152 --------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~ 187 (329)
T cd05588 152 --------------------------------------------TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMF 187 (329)
T ss_pred --------------------------------------------ccccccCCccccCHHHHcCCCCCCccceechHHHHH
Confidence 001146899999999999988999999999999999
Q ss_pred hccc---cCCCC--------chHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCC------hHHHHcCcccC
Q 004989 303 ELFC---PFSTG--------EEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK------MGELLQSEFLN 365 (720)
Q Consensus 303 eLlt---pf~~~--------~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpt------a~eiL~hp~~~ 365 (720)
||++ ||... .........+.....+ ......+...+||.+||.+||.+||+ +.++++||||.
T Consensus 188 el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~~ 266 (329)
T cd05588 188 EMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIR-IPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFR 266 (329)
T ss_pred HHHHCCCCcccccccccccccchHHHHHHHHcCCCC-CCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcCCCCC
Confidence 9999 66421 1111122223322211 11122345569999999999999987 78999999997
Q ss_pred CC
Q 004989 366 EP 367 (720)
Q Consensus 366 ~~ 367 (720)
..
T Consensus 267 ~~ 268 (329)
T cd05588 267 NI 268 (329)
T ss_pred CC
Confidence 64
No 80
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=1.3e-31 Score=289.01 Aligned_cols=232 Identities=19% Similarity=0.228 Sum_probs=176.3
Q ss_pred cccccccccC-----CCCCCcccccccccCCCCccchhhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-C
Q 004989 30 RALNISGVSD-----RNPRLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-G 103 (720)
Q Consensus 30 ~~~~~~~~~~-----~~~~~~~~~r~~~~~~~~~~~~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ 103 (720)
|.+|.+-|+. ++.....+.+....|.-+. ..|. +|+.+|.+|+|+|||++|+ ++..+. .+|||||| .
T Consensus 212 ~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m~~-~~f~--~Ea~iMk~L~H~~lV~l~g-V~~~~~---piyIVtE~m~ 284 (468)
T KOG0197|consen 212 RELGSGQFGEVWLGKWNGSTKVAVKTIKEGSMSP-EAFL--REAQIMKKLRHEKLVKLYG-VCTKQE---PIYIVTEYMP 284 (468)
T ss_pred HHhcCCccceEEEEEEcCCCcccceEEeccccCh-hHHH--HHHHHHHhCcccCeEEEEE-EEecCC---ceEEEEEecc
Confidence 3455555544 5555444444444443332 2233 7888999999999999999 554443 68999999 9
Q ss_pred CCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCccccccc
Q 004989 104 DVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNT 182 (720)
Q Consensus 104 ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~ 182 (720)
.|+|.+||+. .+..++..+.+.++.||++|++||+++++|||||...|||++.++.+||+|||+++..+.+...
T Consensus 285 ~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~----- 359 (468)
T KOG0197|consen 285 KGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYT----- 359 (468)
T ss_pred cCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCceEEEcccccccccCCCcee-----
Confidence 9999999965 5666999999999999999999999999999999999999999999999999988643322111
Q ss_pred ccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccC
Q 004989 183 QNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQ 262 (720)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~ 262 (720)
.....
T Consensus 360 ---------------------------------------------------------------------------~~~~~ 364 (468)
T KOG0197|consen 360 ---------------------------------------------------------------------------ASEGG 364 (468)
T ss_pred ---------------------------------------------------------------------------ecCCC
Confidence 00011
Q ss_pred CCCccccccccCCcccCcccccCCCCCccccchhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHH
Q 004989 263 PFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEA 338 (720)
Q Consensus 263 ~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~ 338 (720)
.+ ...|.|||.+....++.+||||||||+||||+| ||+..... +....+..+..-|.... +|...
T Consensus 365 kf---------PIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~-ev~~~le~GyRlp~P~~-CP~~v 433 (468)
T KOG0197|consen 365 KF---------PIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNE-EVLELLERGYRLPRPEG-CPDEV 433 (468)
T ss_pred CC---------CceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHH-HHHHHHhccCcCCCCCC-CCHHH
Confidence 22 235899999999999999999999999999999 66655444 66777776655555433 55554
Q ss_pred -HHHHHcCCCCCCCCCChHHHH
Q 004989 339 -SFCLWLLHPEPSGRPKMGELL 359 (720)
Q Consensus 339 -~Li~~~L~~dP~~Rpta~eiL 359 (720)
+++..||+.+|++|||.+.+.
T Consensus 434 Y~lM~~CW~~~P~~RPtF~~L~ 455 (468)
T KOG0197|consen 434 YELMKSCWHEDPEDRPTFETLR 455 (468)
T ss_pred HHHHHHHhhCCcccCCCHHHHH
Confidence 999999999999999998554
No 81
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=99.97 E-value=9e-32 Score=294.16 Aligned_cols=241 Identities=16% Similarity=0.232 Sum_probs=165.0
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
...|..++.+++||||+++++ .+.+.. .+|+|||| .|++|.+++.+.+ .+++..++.++.||+.||.|||++||
T Consensus 48 ~~~e~~~l~~l~~~~iv~~~~-~~~~~~---~~~lv~E~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~~L~~lH~~gi 122 (360)
T cd05627 48 IRAERDILVEADGAWVVKMFY-SFQDKR---NLYLIMEFLPGGDMMTLLMKKD-TLSEEATQFYIAETVLAIDAIHQLGF 122 (360)
T ss_pred HHHHHHHHHhCCCCCEeeEEE-EEEcCC---EEEEEEeCCCCccHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 335667889999999999999 555543 67999999 8999999995543 49999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.++|+|||++............... ....+ .++.+.......
T Consensus 123 vHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~~~~~~-------~~~~~------------~~~~~~~~~~~~--- 180 (360)
T cd05627 123 IHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFYRNL-------THNPP------------SDFSFQNMNSKR--- 180 (360)
T ss_pred EccCCCHHHEEECCCCCEEEeeccCCccccccccccccccc-------ccCCc------------cccccccccccc---
Confidence 99999999999999999999999998654221100000000 00000 011000000000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
..+.............+||+.|+|||++.+..++.++|||||||++|
T Consensus 181 ---------------------------------~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvily 227 (360)
T cd05627 181 ---------------------------------KAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMY 227 (360)
T ss_pred ---------------------------------ccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceee
Confidence 00000000000011257999999999999988999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcC----CCCccccccCchHHHHHHHcCCCCCCCCC---ChHHHHcCcccCCC
Q 004989 303 ELFC---PFSTGEEKTRTMSSLRHR----VLPPQLLLKFPKEASFCLWLLHPEPSGRP---KMGELLQSEFLNEP 367 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~----~~p~~~~~~~p~~~~Li~~~L~~dP~~Rp---ta~eiL~hp~~~~~ 367 (720)
||++ ||...... ..+..+... .+|+. ....+...+||.+|+. ||.+|+ ++.++++||||...
T Consensus 228 el~tG~~Pf~~~~~~-~~~~~i~~~~~~~~~p~~-~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~hp~f~~~ 299 (360)
T cd05627 228 EMLIGYPPFCSETPQ-ETYRKVMNWKETLVFPPE-VPISEKAKDLILRFCT-DSENRIGSNGVEEIKSHPFFEGV 299 (360)
T ss_pred ecccCCCCCCCCCHH-HHHHHHHcCCCceecCCC-CCCCHHHHHHHHHhcc-ChhhcCCCCCHHHHhcCCCCCCC
Confidence 9999 66554443 333333321 12221 1233455699999874 999998 58999999999986
No 82
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=99.97 E-value=1e-31 Score=294.86 Aligned_cols=206 Identities=17% Similarity=0.223 Sum_probs=158.2
Q ss_pred hhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCcee
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
+|..+++.++||||+++++ ++.++. .+|+|||| .|++|.+++... .+++..++.++.||+.||.|||++||+|
T Consensus 92 ~e~~i~~~~~hp~iv~~~~-~~~~~~---~~~lv~Ey~~gg~L~~~l~~~--~~~~~~~~~~~~qil~aL~~LH~~~IvH 165 (370)
T cd05621 92 EERDIMAFANSPWVVQLFC-AFQDDK---YLYMVMEYMPGGDLVNLMSNY--DVPEKWAKFYTAEVVLALDAIHSMGLIH 165 (370)
T ss_pred HHHHHHHhCCCCCEeeEEE-EEEcCC---EEEEEEcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCCeEe
Confidence 5677899999999999999 555543 68999999 899999999543 3899999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccc
Q 004989 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+|||++.++.+||+|||++........ .
T Consensus 166 rDLKp~NILl~~~~~~kL~DFG~a~~~~~~~~---------------------------------~-------------- 198 (370)
T cd05621 166 RDVKPDNMLLDKHGHLKLADFGTCMKMDETGM---------------------------------V-------------- 198 (370)
T ss_pred cCCCHHHEEECCCCCEEEEecccceecccCCc---------------------------------e--------------
Confidence 99999999999999999999998743211100 0
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC----CCccccchhhhch
Q 004989 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP----VSCASDIYRLGVL 300 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~----~s~~sDIwSLGvl 300 (720)
.....+||+.|+|||++.+.. ++.++|||||||+
T Consensus 199 ------------------------------------------~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~i 236 (370)
T cd05621 199 ------------------------------------------RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVF 236 (370)
T ss_pred ------------------------------------------ecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHH
Confidence 001146899999999997643 7899999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCC---ccccccCchHHHHHHHcCCCCCCC--CCChHHHHcCcccCCC
Q 004989 301 LFELFC---PFSTGEEKTRTMSSLRHRVLP---PQLLLKFPKEASFCLWLLHPEPSG--RPKMGELLQSEFLNEP 367 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p---~~~~~~~p~~~~Li~~~L~~dP~~--Rpta~eiL~hp~~~~~ 367 (720)
+|||++ ||...... ..+..+...... |......+...+|+.+||..+|.+ |+++.|+++||||+..
T Consensus 237 lyell~G~~Pf~~~~~~-~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~~~~~ 310 (370)
T cd05621 237 LFEMLVGDTPFYADSLV-GTYSKIMDHKNSLNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPFFKND 310 (370)
T ss_pred HHHHHhCCCCCCCCCHH-HHHHHHHhCCcccCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcCcccCCC
Confidence 999999 67655443 233333322111 111122344559999999865543 8999999999999874
No 83
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=99.97 E-value=1.4e-31 Score=288.28 Aligned_cols=207 Identities=18% Similarity=0.253 Sum_probs=163.3
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
...|..+|..++||||+++++ ++..+. .+|++||| .|++|.+++.+.+ .+++..+..++.||+.||.|||++||
T Consensus 47 ~~~E~~il~~l~hp~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i 121 (323)
T cd05584 47 TKAERNILEAVKHPFIVDLIY-AFQTGG---KLYLILEYLSGGELFMHLEREG-IFMEDTACFYLSEISLALEHLHQQGI 121 (323)
T ss_pred HHHHHHHHHhCCCCchhceee-EEecCC---eEEEEEeCCCCchHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 346777999999999999999 554443 57999999 8999999995544 48999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.+||+|||++....... .
T Consensus 122 vH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~---------------------------------~------------- 155 (323)
T cd05584 122 IYRDLKPENILLDAQGHVKLTDFGLCKESIHEG---------------------------------T------------- 155 (323)
T ss_pred ecCCCCHHHeEECCCCCEEEeeCcCCeecccCC---------------------------------C-------------
Confidence 999999999999999999999999873210000 0
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......||+.|+|||++.+..++.++|||||||++|
T Consensus 156 --------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ 191 (323)
T cd05584 156 --------------------------------------------VTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMY 191 (323)
T ss_pred --------------------------------------------cccccCCCccccChhhccCCCCCCcceecccHHHHH
Confidence 001146899999999999888999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC
Q 004989 303 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 367 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~ 367 (720)
||++ ||...... ..+..+.....+ ......+...+||.+||+++|++|| ++.++++||||...
T Consensus 192 ell~G~~pf~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~~~~~~ 262 (323)
T cd05584 192 DMLTGAPPFTAENRK-KTIDKILKGKLN-LPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFFRHV 262 (323)
T ss_pred HHhcCCCCCCCCCHH-HHHHHHHcCCCC-CCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCCCcCCC
Confidence 9999 66654443 333333332221 1112234556999999999999999 89999999999875
No 84
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=99.97 E-value=1.1e-31 Score=288.91 Aligned_cols=201 Identities=18% Similarity=0.209 Sum_probs=157.8
Q ss_pred hcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCC
Q 004989 70 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 148 (720)
Q Consensus 70 ~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLK 148 (720)
++..++||||+++++ .+.... .+|+|||| .|++|..++.+. ..+++..++.++.||+.||.|||++||+|||||
T Consensus 49 ~~~~l~hp~iv~~~~-~~~~~~---~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~givH~dik 123 (323)
T cd05575 49 LLKNVKHPFLVGLHY-SFQTAD---KLYFVLDYVNGGELFFHLQRE-RSFPEPRARFYAAEIASALGYLHSLNIIYRDLK 123 (323)
T ss_pred HHhhCCCCCCCCeeE-EEEeCC---EEEEEEcCCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCC
Confidence 567899999999998 554443 67999999 899999999554 358999999999999999999999999999999
Q ss_pred CCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccC
Q 004989 149 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 228 (720)
Q Consensus 149 P~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~ 228 (720)
|+|||++.++.+||+|||++....... +
T Consensus 124 p~NIll~~~~~~kl~Dfg~~~~~~~~~---------------------------------~------------------- 151 (323)
T cd05575 124 PENILLDSQGHVVLTDFGLCKEGIEHS---------------------------------K------------------- 151 (323)
T ss_pred HHHeEECCCCcEEEeccCCCcccccCC---------------------------------C-------------------
Confidence 999999999999999998873210000 0
Q ss_pred CCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhccc--
Q 004989 229 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 306 (720)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt-- 306 (720)
......||+.|+|||++.+..++.++|||||||++|||++
T Consensus 152 --------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~ 193 (323)
T cd05575 152 --------------------------------------TTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGL 193 (323)
T ss_pred --------------------------------------ccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCC
Confidence 0011468999999999999889999999999999999999
Q ss_pred -cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCCh----HHHHcCcccCCC
Q 004989 307 -PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM----GELLQSEFLNEP 367 (720)
Q Consensus 307 -pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta----~eiL~hp~~~~~ 367 (720)
||...... ..+..+...... ......+...+||.+||+.||.+||++ .++++||||...
T Consensus 194 ~pf~~~~~~-~~~~~i~~~~~~-~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~il~~~~~~~~ 257 (323)
T cd05575 194 PPFYSRDTA-EMYDNILNKPLR-LKPNISVSARHLLEGLLQKDRTKRLGAKDDFLEIKNHVFFSSI 257 (323)
T ss_pred CCCCCCCHH-HHHHHHHcCCCC-CCCCCCHHHHHHHHHHhhcCHHhCCCCCCCHHHHHcCCCcCCC
Confidence 66654433 333333332211 111223455699999999999999987 699999999875
No 85
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.97 E-value=1.4e-31 Score=289.12 Aligned_cols=209 Identities=19% Similarity=0.225 Sum_probs=159.5
Q ss_pred hchhhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 63 RKHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+...|..+|.++ +||||+++++ ++.... .+|++||| .|++|.+++.... .+++.+++.++.||+.||.|||++
T Consensus 50 ~~~~e~~~l~~l~~~~~i~~~~~-~~~~~~---~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~ 124 (332)
T cd05614 50 HTRTERNVLEHVRQSPFLVTLHY-AFQTEA---KLHLILDYVSGGEMFTHLYQRD-NFSEDEVRFYSGEIILALEHLHKL 124 (332)
T ss_pred HHHHHHHHHHhccCCCCcccEEE-EEecCC---EEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC
Confidence 344677788888 5999999998 554443 57999999 8999999995543 499999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+|||++.++.+||+|||++..+......
T Consensus 125 ~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~~~~------------------------------------------- 161 (332)
T cd05614 125 GIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEEKE------------------------------------------- 161 (332)
T ss_pred CcEecCCCHHHeEECCCCCEEEeeCcCCccccccCCC-------------------------------------------
Confidence 9999999999999999999999999987432111000
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC-CCccccchhhhc
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGV 299 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGv 299 (720)
......||+.|+|||++.+.. ++.++|||||||
T Consensus 162 ----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~ 195 (332)
T cd05614 162 ----------------------------------------------RTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGI 195 (332)
T ss_pred ----------------------------------------------ccccccCCccccCHHHhcCCCCCCCccccccchh
Confidence 000146899999999998764 789999999999
Q ss_pred hhhhccc---cCCCCc---hHHHHHHHhhcCCCCcccccc-CchHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC
Q 004989 300 LLFELFC---PFSTGE---EKTRTMSSLRHRVLPPQLLLK-FPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 367 (720)
Q Consensus 300 ll~eLlt---pf~~~~---~~~~~~~~l~~~~~p~~~~~~-~p~~~~Li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~ 367 (720)
++|||++ ||.... ........+... .+.+... .+...+|+.+||+.||++|| ++.++++||||+..
T Consensus 196 il~elltg~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~ 273 (332)
T cd05614 196 LIFELLTGASPFTLEGERNTQSEVSRRILKC--DPPFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKGL 273 (332)
T ss_pred hhhhhhcCCCCCCCCCCCCCHHHHHHHHhcC--CCCCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence 9999999 664321 112222222221 1222223 34455999999999999999 78899999999875
No 86
>PHA02988 hypothetical protein; Provisional
Probab=99.97 E-value=1.1e-31 Score=283.60 Aligned_cols=203 Identities=17% Similarity=0.129 Sum_probs=158.0
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH-C
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-Q 140 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs-~ 140 (720)
+..+|..+|.+++|||||++++.+.........++++||| .|++|.+++.+. ..+++.....++.|++.||.|||+ .
T Consensus 64 ~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~ 142 (283)
T PHA02988 64 ITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYCTRGYLREVLDKE-KDLSFKTKLDMAIDCCKGLYNLYKYT 142 (283)
T ss_pred HHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeCCCCcHHHHHhhC-CCCChhHHHHHHHHHHHHHHHHHhcC
Confidence 4447888999999999999999433322333468999999 999999999554 358999999999999999999998 5
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
+++||||||+|||++.++.+|++|||++...... .
T Consensus 143 ~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~----------------------------------~----------- 177 (283)
T PHA02988 143 NKPYKNLTSVSFLVTENYKLKIICHGLEKILSSP----------------------------------P----------- 177 (283)
T ss_pred CCCCCcCChhhEEECCCCcEEEcccchHhhhccc----------------------------------c-----------
Confidence 9999999999999999999999988877321100 0
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC--CCCCccccchhhh
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG--APVSCASDIYRLG 298 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~--~~~s~~sDIwSLG 298 (720)
...+||+.|+|||++.+ ..++.++||||||
T Consensus 178 ------------------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlG 209 (283)
T PHA02988 178 ------------------------------------------------FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLG 209 (283)
T ss_pred ------------------------------------------------ccccCcccccCHHHhhhccccccchhhhhHHH
Confidence 01357889999999976 5699999999999
Q ss_pred chhhhccc---cCCCCchHHHHHHHhhcCCCCcccc-ccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 299 VLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLL-LKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~-~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|++|||++ ||...... .....+......+.++ ...+...+|+.+||+.||++|||+.|+++
T Consensus 210 vil~el~~g~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 274 (283)
T PHA02988 210 VVLWEIFTGKIPFENLTTK-EIYDLIINKNNSLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILY 274 (283)
T ss_pred HHHHHHHHCCCCCCCCCHH-HHHHHHHhcCCCCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHH
Confidence 99999999 77765443 3333333222223333 33344569999999999999999999985
No 87
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=99.97 E-value=1.4e-31 Score=287.54 Aligned_cols=204 Identities=18% Similarity=0.275 Sum_probs=158.3
Q ss_pred hhhhhccc-CCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 66 SDGVELTH-GDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~L~~-l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.|..++.. ++||||+++++ ++.+.. .+|+|||| .|++|.+++... ..+++..+..++.||+.||+|||++||+
T Consensus 44 ~e~~~l~~~~~~~~i~~~~~-~~~~~~---~~~lv~E~~~~g~L~~~i~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~iv 118 (316)
T cd05620 44 VEKRVLALAWENPFLTHLYC-TFQTKE---HLFFVMEFLNGGDLMFHIQDK-GRFDLYRATFYAAEIVCGLQFLHSKGII 118 (316)
T ss_pred HHHHHHHhccCCCCccCeeE-EEEeCC---EEEEEECCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeE
Confidence 34445543 58999999999 555443 68999999 899999999554 3489999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.++|+|||++...... +-
T Consensus 119 HrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~----------------------------------~~------------- 151 (316)
T cd05620 119 YRDLKLDNVMLDRDGHIKIADFGMCKENVFG----------------------------------DN------------- 151 (316)
T ss_pred ecCCCHHHeEECCCCCEEeCccCCCeecccC----------------------------------CC-------------
Confidence 9999999999999999999999887321000 00
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......||+.|+|||++.+..++.++|||||||++||
T Consensus 152 -------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~e 188 (316)
T cd05620 152 -------------------------------------------RASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYE 188 (316)
T ss_pred -------------------------------------------ceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHH
Confidence 0011468999999999999889999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCCCccccc-cCchHHHHHHHcCCCCCCCCCCh-HHHHcCcccCCC
Q 004989 304 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPKM-GELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~~p~~~~~-~~p~~~~Li~~~L~~dP~~Rpta-~eiL~hp~~~~~ 367 (720)
|++ ||...... .....+.... +.++. ..++..+|+.+||+.||.+||++ +++++||||...
T Consensus 189 l~~g~~Pf~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~~h~~f~~~ 254 (316)
T cd05620 189 MLIGQSPFHGDDED-ELFESIRVDT--PHYPRWITKESKDILEKLFERDPTRRLGVVGNIRGHPFFKTI 254 (316)
T ss_pred HHhCCCCCCCCCHH-HHHHHHHhCC--CCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHcCCCcCCC
Confidence 999 66654432 3333333221 11122 33455699999999999999997 589999999875
No 88
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=99.97 E-value=1.3e-31 Score=289.35 Aligned_cols=206 Identities=17% Similarity=0.226 Sum_probs=157.0
Q ss_pred hhhhhcccC---CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 66 SDGVELTHG---DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 66 ~e~~~L~~l---~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
.|..++... +||||+++++ .+.... .+|+|||| .+++|.+++.+.+ .+++..++.++.||+.||.|||++|
T Consensus 42 ~e~~~l~~~~~~~~p~i~~~~~-~~~~~~---~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qil~al~~LH~~~ 116 (330)
T cd05586 42 GERNILVRTLLDESPFIVGLKF-SFQTDS---DLYLVTDYMSGGELFWHLQKEG-RFSEDRAKFYIAELVLALEHLHKYD 116 (330)
T ss_pred HHHHHHHHhccCCCCcCcceEE-EEecCC---eEEEEEcCCCCChHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 344444443 7999999999 555443 57999999 8999999995543 4999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.++|+|||++....... .
T Consensus 117 ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~---------------------------------~------------ 151 (330)
T cd05586 117 IVYRDLKPENILLDATGHIALCDFGLSKANLTDN---------------------------------K------------ 151 (330)
T ss_pred eEeccCCHHHeEECCCCCEEEecCCcCcCCCCCC---------------------------------C------------
Confidence 9999999999999999999999999873211000 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC-CCccccchhhhch
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVL 300 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGvl 300 (720)
......||+.|+|||++.+.. ++.++|||||||+
T Consensus 152 ---------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvi 186 (330)
T cd05586 152 ---------------------------------------------TTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVL 186 (330)
T ss_pred ---------------------------------------------CccCccCCccccCHHHHcCCCCCCCccceeccccE
Confidence 001146899999999997654 8999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCC----ChHHHHcCcccCCC
Q 004989 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP----KMGELLQSEFLNEP 367 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rp----ta~eiL~hp~~~~~ 367 (720)
+|||++ ||...... ..+..+.............+...+|+.+||.+||.+|| ++.++++||||...
T Consensus 187 l~elltG~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~~~~~~ 259 (330)
T cd05586 187 VFEMCCGWSPFYAEDTQ-QMYRNIAFGKVRFPKNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEHPFFADI 259 (330)
T ss_pred EEEeccCCCCCCCCCHH-HHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcCccccCC
Confidence 999999 66554333 33444433322111111234556999999999999998 78999999999875
No 89
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=99.97 E-value=1.3e-31 Score=287.76 Aligned_cols=207 Identities=18% Similarity=0.248 Sum_probs=163.2
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+...|..+|.+++||||+++++ ++..+. .+|+|||| .+++|.+++.+.. .+++.+++.++.||+.||.|||++|
T Consensus 44 ~~~~E~~~l~~l~h~niv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH~~~ 118 (318)
T cd05582 44 RTKMERDILAEVNHPFIVKLHY-AFQTEG---KLYLILDFLRGGDLFTRLSKEV-MFTEEDVKFYLAELALALDHLHSLG 118 (318)
T ss_pred HHHHHHHHHHhCCCCCcccEEE-EEEcCC---EEEEEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 4457788999999999999999 554443 67999999 8999999995543 4899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.++|+|||++........
T Consensus 119 i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~--------------------------------------------- 153 (318)
T cd05582 119 IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEK--------------------------------------------- 153 (318)
T ss_pred EecCCCCHHHeEECCCCcEEEeeccCCcccCCCCC---------------------------------------------
Confidence 99999999999999999999999988732210000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......||+.|+|||++.+..++.++|||||||++
T Consensus 154 ---------------------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il 188 (318)
T cd05582 154 ---------------------------------------------KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLM 188 (318)
T ss_pred ---------------------------------------------ceecccCChhhcCHHHHcCCCCCCccceeccceEe
Confidence 00114689999999999988899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccc-cCchHHHHHHHcCCCCCCCCCC-----hHHHHcCcccCCC
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~-~~p~~~~Li~~~L~~dP~~Rpt-----a~eiL~hp~~~~~ 367 (720)
|||++ ||...... ..+..+...... ++. ..+...+||.+||++||.+||+ +.+++.||||...
T Consensus 189 ~el~tg~~p~~~~~~~-~~~~~i~~~~~~--~p~~~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~~~~~~~ 260 (318)
T cd05582 189 FEMLTGSLPFQGKDRK-ETMTMILKAKLG--MPQFLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRHPFFSTI 260 (318)
T ss_pred eeeccCCCCCCCCCHH-HHHHHHHcCCCC--CCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCCCCcCCC
Confidence 99999 66654433 333333322211 112 2344569999999999999999 6779999999875
No 90
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=99.97 E-value=1.5e-31 Score=288.89 Aligned_cols=206 Identities=18% Similarity=0.270 Sum_probs=156.5
Q ss_pred hhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 66 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
+|..++.++ +||||+++++ ++.... .+|+|||| .+++|..++... ..+++..++.++.||+.||.|||++||+
T Consensus 44 ~E~~~l~~~~~hp~iv~~~~-~~~~~~---~~~lv~E~~~~~~L~~~~~~~-~~l~~~~~~~i~~qi~~~l~~lH~~~iv 118 (329)
T cd05618 44 TEKHVFEQASNHPFLVGLHS-CFQTES---RLFFVIEYVNGGDLMFHMQRQ-RKLPEEHARFYSAEISLALNYLHERGII 118 (329)
T ss_pred HHHHHHHhcCCCCcCCceee-EEEeCC---EEEEEEeCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 555566554 8999999999 555543 67999999 899999988544 3499999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.+||+|||++...-... +
T Consensus 119 H~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~---------------------------------~-------------- 151 (329)
T cd05618 119 YRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG---------------------------------D-------------- 151 (329)
T ss_pred eCCCCHHHEEECCCCCEEEeeCCccccccCCC---------------------------------C--------------
Confidence 99999999999999999999999873210000 0
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......||+.|+|||++.+..++.++|||||||++||
T Consensus 152 -------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e 188 (329)
T cd05618 152 -------------------------------------------TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFE 188 (329)
T ss_pred -------------------------------------------ccccccCCccccCHHHHcCCCCCCccceecccHHHHH
Confidence 0011468999999999999889999999999999999
Q ss_pred ccc---cCCCC--------chHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCC------hHHHHcCcccCC
Q 004989 304 LFC---PFSTG--------EEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK------MGELLQSEFLNE 366 (720)
Q Consensus 304 Llt---pf~~~--------~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpt------a~eiL~hp~~~~ 366 (720)
|++ ||... .........+..... .......+...+||.+||+.||.+||+ +.++++||||..
T Consensus 189 l~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~-~~p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~f~~ 267 (329)
T cd05618 189 MMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI-RIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRN 267 (329)
T ss_pred HhhCCCCCccCCCcCCcccccHHHHHHHHhcCCC-CCCCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcCCCCCC
Confidence 999 66311 111112222222211 111123345569999999999999998 479999999987
Q ss_pred C
Q 004989 367 P 367 (720)
Q Consensus 367 ~ 367 (720)
.
T Consensus 268 ~ 268 (329)
T cd05618 268 V 268 (329)
T ss_pred C
Confidence 5
No 91
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=99.97 E-value=1.7e-31 Score=286.87 Aligned_cols=203 Identities=17% Similarity=0.262 Sum_probs=157.3
Q ss_pred hhhhcc-cCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCcee
Q 004989 67 DGVELT-HGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 67 e~~~L~-~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
|..++. ..+||||+++++ ++..+. .+|+|||| .|++|.+++.... .+++..++.++.||+.||.|||++||+|
T Consensus 45 e~~~l~~~~~hp~i~~~~~-~~~~~~---~~~lv~e~~~gg~L~~~~~~~~-~~~~~~~~~~~~qi~~al~~LH~~~ivH 119 (316)
T cd05592 45 ERRVLALAWEHPFLTHLFC-TFQTKE---HLFFVMEYLNGGDLMFHIQSSG-RFDEARARFYAAEIICGLQFLHKKGIIY 119 (316)
T ss_pred HHHHHHhccCCCCccceee-EEEcCC---EEEEEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCEEe
Confidence 333444 468999999999 554443 68999999 8999999995544 4999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccc
Q 004989 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+|||++.++.+||+|||++.......
T Consensus 120 ~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~------------------------------------------------- 150 (316)
T cd05592 120 RDLKLDNVLLDKDGHIKIADFGMCKENMNGE------------------------------------------------- 150 (316)
T ss_pred CCCCHHHeEECCCCCEEEccCcCCeECCCCC-------------------------------------------------
Confidence 9999999999999999999998873210000
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhc
Q 004989 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 304 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eL 304 (720)
......+||+.|+|||++.+..++.++|||||||++|||
T Consensus 151 -----------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el 189 (316)
T cd05592 151 -----------------------------------------GKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEM 189 (316)
T ss_pred -----------------------------------------CccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHH
Confidence 000114689999999999988899999999999999999
Q ss_pred cc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCCh-HHHHcCcccCCC
Q 004989 305 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKM-GELLQSEFLNEP 367 (720)
Q Consensus 305 lt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta-~eiL~hp~~~~~ 367 (720)
++ ||...... .....+.... +.++... +...+|+.+||+.||.+||++ .++++||||...
T Consensus 190 l~G~~Pf~~~~~~-~~~~~i~~~~--~~~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~h~~~~~~ 254 (316)
T cd05592 190 LIGQSPFHGEDED-ELFDSILNDR--PHFPRWISKEAKDCLSKLFERDPTKRLGVDGDIRQHPFFRGI 254 (316)
T ss_pred HhCCCCCCCCCHH-HHHHHHHcCC--CCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHcCcccCCC
Confidence 99 67655443 3333333221 1222223 345599999999999999986 588899999875
No 92
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=99.97 E-value=1.3e-31 Score=282.27 Aligned_cols=207 Identities=17% Similarity=0.201 Sum_probs=160.1
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~---~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
..|..+|..++||||+++++ ++.... .+|++||| .|++|.+++.. ....+++..++.++.||+.||.|||++
T Consensus 41 ~~E~~il~~l~~~~i~~~~~-~~~~~~---~~~lv~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~ 116 (280)
T cd05608 41 MVEKRILAKVHSRFIVSLAY-AFQTKT---DLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQR 116 (280)
T ss_pred HHHHHHHHhCCCCcEeeeeE-EEcCCC---eEEEEEeCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 46778999999999999998 554443 57999999 89999988732 334589999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+||+++.++.++|+|||.+........
T Consensus 117 ~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~-------------------------------------------- 152 (280)
T cd05608 117 RIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQS-------------------------------------------- 152 (280)
T ss_pred CcccCCCCHHHEEECCCCCEEEeeCccceecCCCCc--------------------------------------------
Confidence 999999999999999999999999998743211000
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhch
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
......||+.|+|||.+.+..++.++|||||||+
T Consensus 153 ----------------------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~i 186 (280)
T cd05608 153 ----------------------------------------------KTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVT 186 (280)
T ss_pred ----------------------------------------------cccccCCCcCccCHHHhcCCCCCccccHHHHHHH
Confidence 0001367999999999999889999999999999
Q ss_pred hhhccc---cCCCCchH---HHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC
Q 004989 301 LFELFC---PFSTGEEK---TRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 367 (720)
Q Consensus 301 l~eLlt---pf~~~~~~---~~~~~~l~~~~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~ 367 (720)
+|||++ ||...... ......+... +..+....+ ...+|+.+||+.||++|| +++++++||||+..
T Consensus 187 l~el~~g~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h~~~~~~ 263 (280)
T cd05608 187 LYEMIAARGPFRARGEKVENKELKQRILND--SVTYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTHPLFRDL 263 (280)
T ss_pred HHHHHhCCCCCCCCCcchhHHHHHHhhccc--CCCCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcChhhhcC
Confidence 999999 66543221 1111111111 112222333 445999999999999999 88999999999885
No 93
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=99.97 E-value=2.4e-31 Score=279.82 Aligned_cols=207 Identities=16% Similarity=0.195 Sum_probs=159.4
Q ss_pred hhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.|..++.+++||||+++++ .++.+. .+|++||| .|++|.+++.. ....+++..+..++.||+.||.|||+.||+
T Consensus 42 ~E~~il~~l~hp~i~~~~~-~~~~~~---~~~lv~e~~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~iv 117 (277)
T cd05607 42 LEKEILEKVNSPFIVNLAY-AFESKT---HLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIV 117 (277)
T ss_pred HHHHHHHhcCCCcEEEEEE-EEecCC---eEEEEEecCCCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEE
Confidence 4777899999999999998 555443 67999999 89999998843 334589999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+||+++.++.++|+|||.+.......
T Consensus 118 H~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~------------------------------------------------ 149 (277)
T cd05607 118 YRDMKPENVLLDDQGNCRLSDLGLAVELKDGK------------------------------------------------ 149 (277)
T ss_pred EccCChHhEEEcCCCCEEEeeceeeeecCCCc------------------------------------------------
Confidence 99999999999999999999998873221100
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......||+.|+|||++.+..++.++|||||||++||
T Consensus 150 -------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~e 186 (277)
T cd05607 150 -------------------------------------------TITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYE 186 (277)
T ss_pred -------------------------------------------eeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHH
Confidence 0001357899999999998889999999999999999
Q ss_pred ccc---cCCCCchH---HHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCCh----HHHHcCcccCCC
Q 004989 304 LFC---PFSTGEEK---TRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM----GELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~---~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta----~eiL~hp~~~~~ 367 (720)
|++ ||...... ............+.......+...+|+.+||.+||.+||++ .+++.||||+..
T Consensus 187 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~~h~~f~~~ 260 (277)
T cd05607 187 MVAGRTPFKDHKEKVAKEELKRRTLEDEVKFEHQNFTEESKDICRLFLAKKPEDRLGSREKNDDPRKHEFFKTI 260 (277)
T ss_pred HHhCCCCCCCCcchhhHHHHHHHhhccccccccccCCHHHHHHHHHHhccCHhhCCCCccchhhhhcChhhcCC
Confidence 999 66543221 12222222222221112233455699999999999999999 677899999875
No 94
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=99.97 E-value=1.6e-31 Score=287.06 Aligned_cols=204 Identities=20% Similarity=0.270 Sum_probs=158.6
Q ss_pred hhhhhccc-CCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 66 SDGVELTH-GDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~L~~-l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.|..++.. ++||||+++++ ++.+.. .+|++||| .|++|.+++... ..+++.++..++.||+.||.|||++||+
T Consensus 44 ~e~~~l~~~~~hp~iv~~~~-~~~~~~---~~~lv~ey~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~al~~LH~~~iv 118 (316)
T cd05619 44 VEKRVLSLAWEHPFLTHLYC-TFQTKE---NLFFVMEYLNGGDLMFHIQSC-HKFDLPRATFYAAEIICGLQFLHSKGIV 118 (316)
T ss_pred HHHHHHHhccCCCcCcceEE-EEEeCC---EEEEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCeE
Confidence 44455554 69999999999 554443 58999999 899999999554 3489999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.++|+|||++...... +-
T Consensus 119 Hrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~----------------------------------~~------------- 151 (316)
T cd05619 119 YRDLKLDNILLDTDGHIKIADFGMCKENMLG----------------------------------DA------------- 151 (316)
T ss_pred eCCCCHHHEEECCCCCEEEccCCcceECCCC----------------------------------CC-------------
Confidence 9999999999999999999999887321000 00
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......||+.|+|||++.+..++.++|||||||++||
T Consensus 152 -------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~e 188 (316)
T cd05619 152 -------------------------------------------KTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYE 188 (316)
T ss_pred -------------------------------------------ceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHH
Confidence 0011468999999999998889999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCCCccccc-cCchHHHHHHHcCCCCCCCCCChH-HHHcCcccCCC
Q 004989 304 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPKMG-ELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~~p~~~~~-~~p~~~~Li~~~L~~dP~~Rpta~-eiL~hp~~~~~ 367 (720)
|++ ||...... .....+.... +.++. ...+..+|+.+||+.||.+||++. ++++||||...
T Consensus 189 l~~G~~pf~~~~~~-~~~~~i~~~~--~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~h~~~~~~ 254 (316)
T cd05619 189 MLIGQSPFHGHDEE-ELFQSIRMDN--PCYPRWLTREAKDILVKLFVREPERRLGVKGDIRQHPFFREI 254 (316)
T ss_pred HHhCCCCCCCCCHH-HHHHHHHhCC--CCCCccCCHHHHHHHHHHhccCHhhcCCChHHHHcCcccCCC
Confidence 999 66554433 3333333221 11122 223455999999999999999996 89999999886
No 95
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=6.2e-33 Score=290.91 Aligned_cols=209 Identities=19% Similarity=0.262 Sum_probs=168.5
Q ss_pred hhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 62 LRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 62 ~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
--...|..+|+++++|||.++|+.++... .++++||| .||++.+.|+ .+..+.+.++..++++++.||.|||++
T Consensus 56 ediqqei~~Ls~~~~~~it~yygsyl~g~----~LwiiMey~~gGsv~~lL~-~~~~~~E~~i~~ilre~l~~l~ylH~~ 130 (467)
T KOG0201|consen 56 EDIQQEISVLSQCDSPNITEYYGSYLKGT----KLWIIMEYCGGGSVLDLLK-SGNILDEFEIAVILREVLKGLDYLHSE 130 (467)
T ss_pred HHHHHHHHHHHhcCcchHHhhhhheeecc----cHHHHHHHhcCcchhhhhc-cCCCCccceeeeehHHHHHHhhhhhhc
Confidence 34447888999999999999999544433 57999999 9999999984 444469999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
+.+|||||+.|||+..+|.+|++|||++......
T Consensus 131 ~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~---------------------------------------------- 164 (467)
T KOG0201|consen 131 KKIHRDIKAANILLSESGDVKLADFGVAGQLTNT---------------------------------------------- 164 (467)
T ss_pred ceecccccccceeEeccCcEEEEecceeeeeech----------------------------------------------
Confidence 9999999999999999999999999987322110
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhch
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
..+....+|||.|||||++.+..|+.++||||||++
T Consensus 165 --------------------------------------------~~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGIT 200 (467)
T KOG0201|consen 165 --------------------------------------------VKRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGIT 200 (467)
T ss_pred --------------------------------------------hhccccccccccccchhhhccccccchhhhhhhhHH
Confidence 000122689999999999998889999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCccccccCch-HHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~-~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
.+||++ |+....+ ...+..| ....||.+...+++ ..+|+..||.+||+.||+|.++|.|+|++..
T Consensus 201 aiEla~GePP~s~~hP-mrvlflI-pk~~PP~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh~FIk~a 269 (467)
T KOG0201|consen 201 AIELAKGEPPHSKLHP-MRVLFLI-PKSAPPRLDGDFSPPFKEFVEACLDKNPEFRPSAKELLKHKFIKRA 269 (467)
T ss_pred HHHHhcCCCCCcccCc-ceEEEec-cCCCCCccccccCHHHHHHHHHHhhcCcccCcCHHHHhhhHHHHhc
Confidence 999999 4433333 1222222 33456666666666 6699999999999999999999999999984
No 96
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=99.97 E-value=1.6e-31 Score=287.21 Aligned_cols=205 Identities=19% Similarity=0.243 Sum_probs=160.2
Q ss_pred hhhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 65 HSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
.+|..++..+ +||||+++++ ++.... .+|+|||| .|++|..++.+.. .+++..+..++.||+.||.|||++||
T Consensus 43 ~~e~~il~~~~~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~-~l~~~~~~~~~~qi~~~l~~LH~~~i 117 (318)
T cd05570 43 MTEKRVLALAGKHPFLTQLHS-CFQTKD---RLFFVMEYVNGGDLMFHIQRSG-RFDEPRARFYAAEIVLGLQFLHERGI 117 (318)
T ss_pred HHHHHHHHhccCCCCccceee-EEEcCC---EEEEEEcCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 3555566665 7999999999 555543 68999999 8999999885543 49999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.++|+|||++...... +.
T Consensus 118 vH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----------------------------------~~------------ 151 (318)
T cd05570 118 IYRDLKLDNVLLDSEGHIKIADFGMCKEGILG----------------------------------GV------------ 151 (318)
T ss_pred EccCCCHHHeEECCCCcEEecccCCCeecCcC----------------------------------CC------------
Confidence 99999999999999999999999887321000 00
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
.....+||+.|+|||++.+..++.++|||||||++|
T Consensus 152 --------------------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~ 187 (318)
T cd05570 152 --------------------------------------------TTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLY 187 (318)
T ss_pred --------------------------------------------cccceecCccccCHHHhcCCCCCcchhhhhHHHHHH
Confidence 001136899999999999988999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCCh-----HHHHcCcccCCC
Q 004989 303 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKM-----GELLQSEFLNEP 367 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta-----~eiL~hp~~~~~ 367 (720)
+|++ ||...... .....+..... .++... +...+||.+||+.||.+||++ .++++||||...
T Consensus 188 ~l~~G~~pf~~~~~~-~~~~~i~~~~~--~~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~~~~~~~ 258 (318)
T cd05570 188 EMLAGQSPFEGDDED-ELFQSILEDEV--RYPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGHPFFREI 258 (318)
T ss_pred HHhhCCCCCCCCCHH-HHHHHHHcCCC--CCCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence 9999 67654433 33333332211 112223 344599999999999999999 999999999875
No 97
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=9.2e-32 Score=284.32 Aligned_cols=205 Identities=19% Similarity=0.285 Sum_probs=162.7
Q ss_pred hhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCcee
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|...+.-+.|||||+||+ +..... .+|+++|+ .+|+|.+||-++...+.+..+++||.||+.|+.|+|+..|||
T Consensus 66 qEVRCMKLVQHpNiVRLYE-ViDTQT---KlyLiLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVH 141 (864)
T KOG4717|consen 66 QEVRCMKLVQHPNIVRLYE-VIDTQT---KLYLILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVH 141 (864)
T ss_pred HHHHHHHHhcCcCeeeeee-hhcccc---eEEEEEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhc
Confidence 5666788889999999999 443332 58999999 889999999777777999999999999999999999999999
Q ss_pred ccCCCCcEEEc-cCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 145 HNVRPSCFVMS-SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 145 rDLKP~NILl~-~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
|||||+|+++- .-|-|||.|||++-.|..-
T Consensus 142 RDLKPENVVFFEKlGlVKLTDFGFSNkf~PG------------------------------------------------- 172 (864)
T KOG4717|consen 142 RDLKPENVVFFEKLGLVKLTDFGFSNKFQPG------------------------------------------------- 172 (864)
T ss_pred ccCCcceeEEeeecCceEeeeccccccCCCc-------------------------------------------------
Confidence 99999998876 6788999888876221000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCC-ccccchhhhchhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVS-CASDIYRLGVLLF 302 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s-~~sDIwSLGvll~ 302 (720)
.+.+..+|+..|-|||++.|..|+ +++||||||||||
T Consensus 173 ------------------------------------------~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILy 210 (864)
T KOG4717|consen 173 ------------------------------------------KKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILY 210 (864)
T ss_pred ------------------------------------------chhhcccchhhccCchhhhcCccCCcchhhhHHHHHHH
Confidence 011225899999999999999985 6899999999999
Q ss_pred hccc---cCCCCchHHHHHHHh-hcCCCCccccccCchHH-HHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004989 303 ELFC---PFSTGEEKTRTMSSL-RHRVLPPQLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l-~~~~~p~~~~~~~p~~~-~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
.|+| ||...+.....-..+ .+...|... ++++ +||..||..||.+|.+.+||..++|++....
T Consensus 211 MLVCGq~PFqeANDSETLTmImDCKYtvPshv----S~eCrdLI~sMLvRdPkkRAslEeI~s~~Wlq~~D~ 278 (864)
T KOG4717|consen 211 MLVCGQPPFQEANDSETLTMIMDCKYTVPSHV----SKECRDLIQSMLVRDPKKRASLEEIVSTSWLQAGDR 278 (864)
T ss_pred HHHhCCCccccccchhhhhhhhcccccCchhh----hHHHHHHHHHHHhcCchhhccHHHHhccccccCCCC
Confidence 9999 776554442222222 123334433 4444 9999999999999999999999999998744
No 98
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=99.97 E-value=2.6e-31 Score=291.85 Aligned_cols=214 Identities=18% Similarity=0.235 Sum_probs=160.5
Q ss_pred hchhhhhhcccCCCCCceecccceeecCC--CCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEA--AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~--~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+..+|..+|..++||||+++++ ++.... ....+|++|||.+++|.+++.... .+++..++.++.||+.||.|||++
T Consensus 45 ~~~~E~~~l~~l~h~niv~~~~-~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~-~l~~~~~~~~~~qi~~aL~~LH~~ 122 (372)
T cd07853 45 RVFRELKMLCFFKHDNVLSALD-ILQPPHIDPFEEIYVVTELMQSDLHKIIVSPQ-PLSSDHVKVFLYQILRGLKYLHSA 122 (372)
T ss_pred HHHHHHHHHHhCCCCCcCCHhh-eecCCCccccceEEEEeeccccCHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHhC
Confidence 4557888999999999999999 444332 122579999997789999885543 599999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+|||++.++.+||+|||++........ .
T Consensus 123 ~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~~-------------------------------------~------ 159 (372)
T cd07853 123 GILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDES-------------------------------------K------ 159 (372)
T ss_pred CeeCCCCChHHEEECCCCCEEeccccceeecccCcc-------------------------------------c------
Confidence 999999999999999999999999988743211000 0
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC-CCccccchhhhc
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGV 299 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGv 299 (720)
......+|++|+|||++.+.. ++.++|||||||
T Consensus 160 ----------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~ 193 (372)
T cd07853 160 ----------------------------------------------HMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGC 193 (372)
T ss_pred ----------------------------------------------cCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHH
Confidence 001135789999999998754 799999999999
Q ss_pred hhhhccc---cCCCCchHHHHHH----------------------Hh-hcCCCCccc------c-ccCchHHHHHHHcCC
Q 004989 300 LLFELFC---PFSTGEEKTRTMS----------------------SL-RHRVLPPQL------L-LKFPKEASFCLWLLH 346 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~----------------------~l-~~~~~p~~~------~-~~~p~~~~Li~~~L~ 346 (720)
++|||++ ||........... .+ .....++.. . ...+...+||.+||+
T Consensus 194 il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~ 273 (372)
T cd07853 194 IFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLV 273 (372)
T ss_pred HHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCC
Confidence 9999999 6655433211110 01 111111111 1 122344599999999
Q ss_pred CCCCCCCChHHHHcCcccCCC
Q 004989 347 PEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 347 ~dP~~Rpta~eiL~hp~~~~~ 367 (720)
+||.+|||+.|+|+||||...
T Consensus 274 ~dP~~R~t~~e~l~hp~~~~~ 294 (372)
T cd07853 274 FDPDKRISAADALAHPYLDEG 294 (372)
T ss_pred CChhhCcCHHHHhcCHhhCCC
Confidence 999999999999999999886
No 99
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=99.97 E-value=2.6e-31 Score=286.26 Aligned_cols=207 Identities=16% Similarity=0.228 Sum_probs=159.6
Q ss_pred hchhhhhhcccCCCCC-ceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 63 RKHSDGVELTHGDHLR-NQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~L~~l~Hpn-IV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+...|..++..+.|++ |+++++ ++.... .+|+|||| .|++|.+++.... .+++..++.++.||+.||.|||++
T Consensus 46 ~~~~e~~~l~~~~~~~~i~~~~~-~~~~~~---~~~lv~E~~~~g~L~~~~~~~~-~~~~~~~~~~~~qi~~al~~lH~~ 120 (324)
T cd05587 46 CTMVEKRVLALPGKPPFLTQLHS-CFQTMD---RLYFVMEYVNGGDLMYHIQQVG-KFKEPHAVFYAAEIAIGLFFLHSK 120 (324)
T ss_pred HHHHHHHHHHhcCCCCceeeeEE-EEEcCC---EEEEEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC
Confidence 3346667788887765 777777 554443 57999999 8999999995543 489999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+|||++.++.++|+|||++.......
T Consensus 121 ~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~--------------------------------------------- 155 (324)
T cd05587 121 GIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGG--------------------------------------------- 155 (324)
T ss_pred CeEecCCCHHHeEEcCCCCEEEeecCcceecCCCC---------------------------------------------
Confidence 99999999999999999999999999873210000
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhch
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
......+||+.|+|||++.+..++.++|||||||+
T Consensus 156 ---------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvi 190 (324)
T cd05587 156 ---------------------------------------------KTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVL 190 (324)
T ss_pred ---------------------------------------------CceeeecCCccccChhhhcCCCCCcccchhhhHHH
Confidence 00011468999999999999889999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCccccc-cCchHHHHHHHcCCCCCCCCCCh-----HHHHcCcccCCC
Q 004989 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPKM-----GELLQSEFLNEP 367 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~-~~p~~~~Li~~~L~~dP~~Rpta-----~eiL~hp~~~~~ 367 (720)
+|||++ ||...... .....+..... .++. ..+...+|+.+||++||.+|+++ .++++||||...
T Consensus 191 l~elltG~~pf~~~~~~-~~~~~i~~~~~--~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~hp~~~~~ 263 (324)
T cd05587 191 LYEMLAGQPPFDGEDED-ELFQSIMEHNV--SYPKSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREHAFFRRI 263 (324)
T ss_pred HHHHHhCCCCCCCCCHH-HHHHHHHcCCC--CCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence 999999 67655443 33333333221 1222 23445599999999999999976 899999999875
No 100
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=99.97 E-value=3.4e-31 Score=286.77 Aligned_cols=206 Identities=18% Similarity=0.230 Sum_probs=155.3
Q ss_pred chhhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC--------------------------
Q 004989 64 KHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-------------------------- 115 (720)
Q Consensus 64 ~~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~-------------------------- 115 (720)
...|..+|.++ +|||||++++ ++.... ..++++||| .+|+|.++|....
T Consensus 57 ~~~E~~~l~~l~~h~niv~~~~-~~~~~~--~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (338)
T cd05102 57 LMSELKILIHIGNHLNVVNLLG-ACTKPN--GPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRV 133 (338)
T ss_pred HHHHHHHHHHhccCcceeeEEe-EecCCC--CceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhcc
Confidence 34677888888 8999999999 443322 257999999 9999999995321
Q ss_pred -----------------------------------CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCce
Q 004989 116 -----------------------------------RSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHV 160 (720)
Q Consensus 116 -----------------------------------~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~v 160 (720)
..+++.++..++.||+.||.|||++||+||||||+|||++.++.+
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~ 213 (338)
T cd05102 134 DRRIEAGQASVLFSRFQPSTSGSTNPPQETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVV 213 (338)
T ss_pred ccccccccCCccccccccccCcccccchhccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcE
Confidence 247788999999999999999999999999999999999999999
Q ss_pred EEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCCCcccccccccc
Q 004989 161 SFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVE 240 (720)
Q Consensus 161 kliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~ 240 (720)
||+|||+++...... .+
T Consensus 214 kl~DfG~a~~~~~~~---------------------------------~~------------------------------ 230 (338)
T cd05102 214 KICDFGLARDIYKDP---------------------------------DY------------------------------ 230 (338)
T ss_pred EEeecccccccccCc---------------------------------ch------------------------------
Confidence 999999874321100 00
Q ss_pred ccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhccc----cCCCCchHHH
Q 004989 241 GMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTR 316 (720)
Q Consensus 241 ~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~ 316 (720)
. ......+++.|+|||++.+..++.++|||||||+||||++ ||........
T Consensus 231 -------~------------------~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~ 285 (338)
T cd05102 231 -------V------------------RKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEE 285 (338)
T ss_pred -------h------------------cccCCCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHH
Confidence 0 0001245778999999998889999999999999999986 6655433333
Q ss_pred HHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 317 TMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 317 ~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
....+..+..+.......+...+|+.+||+.||.+|||+.|+++
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~el~~ 329 (338)
T cd05102 286 FCQRLKDGTRMRAPENATPEIYRIMLACWQGDPKERPTFSALVE 329 (338)
T ss_pred HHHHHhcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 33444433332222223345569999999999999999999985
No 101
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=99.97 E-value=3e-31 Score=284.02 Aligned_cols=212 Identities=17% Similarity=0.191 Sum_probs=151.6
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhC--------CCCCCCHHHHHHHHHHHHHHHH
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK--------PKRSVDVYECLHIFRQIVEIVY 135 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~--------~~~~l~~~~~~~i~~QIl~aL~ 135 (720)
..+|..+|.+++||||+++++ ++.... ...+|++|||.+++|.+++.. ....+++..++.++.||+.||.
T Consensus 45 ~~~E~~~l~~l~h~niv~~~~-~~~~~~-~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~ 122 (317)
T cd07867 45 ACREIALLRELKHPNVIALQK-VFLSHS-DRKVWLLFDYAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIH 122 (317)
T ss_pred HHHHHHHHHhCCCCCeeeEEE-EEeccC-CCeEEEEEeeeCCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHH
Confidence 447888999999999999999 443322 236799999977899988732 1224889999999999999999
Q ss_pred HHHHCCceeccCCCCcEEE----ccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccc
Q 004989 136 AAHSQGIVVHNVRPSCFVM----SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQ 211 (720)
Q Consensus 136 yLHs~gIvHrDLKP~NILl----~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfg 211 (720)
|||++||+||||||+|||+ +.++.+||+|||+++..+..... .
T Consensus 123 ~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~--------------------------------~- 169 (317)
T cd07867 123 YLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKP--------------------------------L- 169 (317)
T ss_pred HHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceeccCCCccc--------------------------------c-
Confidence 9999999999999999999 45678999999988543211000 0
Q ss_pred cccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC-CCc
Q 004989 212 LVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSC 290 (720)
Q Consensus 212 la~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~ 290 (720)
.......||+.|+|||++.+.. ++.
T Consensus 170 ------------------------------------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~ 195 (317)
T cd07867 170 ------------------------------------------------------ADLDPVVVTFWYRAPELLLGARHYTK 195 (317)
T ss_pred ------------------------------------------------------cccCcceecccccCcHHhcCCCccCc
Confidence 0001146799999999997754 899
Q ss_pred cccchhhhchhhhccc---cCCCCchH---------HHH---H-----------HHhhc-------------CCCC-ccc
Q 004989 291 ASDIYRLGVLLFELFC---PFSTGEEK---------TRT---M-----------SSLRH-------------RVLP-PQL 330 (720)
Q Consensus 291 ~sDIwSLGvll~eLlt---pf~~~~~~---------~~~---~-----------~~l~~-------------~~~p-~~~ 330 (720)
++|||||||++|||++ ||...... ... . ..+.. .... +.+
T Consensus 196 ~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (317)
T cd07867 196 AIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSL 275 (317)
T ss_pred HHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHHhcCCCChhhhhhhhhcccchhhhhhhcccccCCchh
Confidence 9999999999999999 55322110 000 0 00000 0000 000
Q ss_pred --------cccCchHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004989 331 --------LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 331 --------~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
....+...+|+.+||..||.+|||+.|+|+||||
T Consensus 276 ~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07867 276 IKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPYF 317 (317)
T ss_pred hhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 0011234489999999999999999999999998
No 102
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=7.8e-32 Score=292.82 Aligned_cols=226 Identities=20% Similarity=0.243 Sum_probs=176.2
Q ss_pred ccccccCCCCccchh--hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCC--CHHH
Q 004989 48 ERFGVRGDDSNDFEL--RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSV--DVYE 122 (720)
Q Consensus 48 ~r~~~~~~~~~~~~~--r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l--~~~~ 122 (720)
.||.+..-...++++ --+.|+.+-++|+|.|||+++|.+-+.+ ++-|.||- +||+|..+|+..-+++ ++..
T Consensus 601 vrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senG----f~kIFMEqVPGGSLSsLLrskWGPlKDNEst 676 (1226)
T KOG4279|consen 601 VRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENG----FFKIFMEQVPGGSLSSLLRSKWGPLKDNEST 676 (1226)
T ss_pred eEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCC----eEEEEeecCCCCcHHHHHHhccCCCccchhH
Confidence 345554444444444 3447777888899999999999433333 78899999 9999999998877778 8999
Q ss_pred HHHHHHHHHHHHHHHHHCCceeccCCCCcEEEc-cCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhh
Q 004989 123 CLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMS-SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQR 201 (720)
Q Consensus 123 ~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~-~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (720)
+-.|.+||++||.|||.+.|||||||-+|+|++ -+|.+||.|||.++...
T Consensus 677 m~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLA----------------------------- 727 (1226)
T KOG4279|consen 677 MNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLA----------------------------- 727 (1226)
T ss_pred HHHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEEecccccchhhc-----------------------------
Confidence 999999999999999999999999999999997 78999999999884421
Q ss_pred hhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcc
Q 004989 202 RTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPE 281 (720)
Q Consensus 202 r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE 281 (720)
.. .|++. ...||..|||||
T Consensus 728 -------gi-----------------------------------------------------nP~TE-TFTGTLQYMAPE 746 (1226)
T KOG4279|consen 728 -------GI-----------------------------------------------------NPCTE-TFTGTLQYMAPE 746 (1226)
T ss_pred -------cC-----------------------------------------------------Ccccc-ccccchhhhChH
Confidence 00 01111 157999999999
Q ss_pred cccCCC--CCccccchhhhchhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchH-HHHHHHcCCCCCCCCCCh
Q 004989 282 ELAGAP--VSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKE-ASFCLWLLHPEPSGRPKM 355 (720)
Q Consensus 282 ~l~~~~--~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~-~~Li~~~L~~dP~~Rpta 355 (720)
++..++ |+.++|||||||++.||.| ||........+|-...--...|.++...+.+ ..||++|+.+||.+||+|
T Consensus 747 vIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkVGmyKvHP~iPeelsaeak~FilrcFepd~~~R~sA 826 (1226)
T KOG4279|consen 747 VIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKVGMYKVHPPIPEELSAEAKNFILRCFEPDPCDRPSA 826 (1226)
T ss_pred hhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhhcceecCCCCcHHHHHHHHHHHHHHcCCCcccCccH
Confidence 998776 9999999999999999999 5655444455555554333333344444444 499999999999999999
Q ss_pred HHHHcCcccCCC
Q 004989 356 GELLQSEFLNEP 367 (720)
Q Consensus 356 ~eiL~hp~~~~~ 367 (720)
.++|+.||++..
T Consensus 827 ~~LL~DpFlq~~ 838 (1226)
T KOG4279|consen 827 KDLLQDPFLQHN 838 (1226)
T ss_pred HHhccCcccccC
Confidence 999999999876
No 103
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=99.97 E-value=1.2e-31 Score=294.99 Aligned_cols=205 Identities=20% Similarity=0.291 Sum_probs=156.4
Q ss_pred hhhhhcccCC-C-----CCceecccceeecCCCCCcEEEEEecCCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHH
Q 004989 66 SDGVELTHGD-H-----LRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 66 ~e~~~L~~l~-H-----pnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
.|..+|.+|+ | -|||++++.++ ... ++|||+|+.+.+|.++|+. ...+++...++.|+.||+.||.+||
T Consensus 231 ~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~-fr~---HlciVfELL~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~ 306 (586)
T KOG0667|consen 231 IEIRILELLNKHDPDDKYNIVRMLDYFY-FRN---HLCIVFELLSTNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLH 306 (586)
T ss_pred HHHHHHHHHhccCCCCCeeEEEeeeccc-ccc---ceeeeehhhhhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 7888888887 3 48999999433 333 7899999999999999943 4456999999999999999999999
Q ss_pred HCCceeccCCCCcEEEccC--CceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCC
Q 004989 139 SQGIVVHNVRPSCFVMSSF--NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 216 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~~~--~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~ 216 (720)
+.||||+||||+||||... ..||+||||+++..+.-.
T Consensus 307 ~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q~v----------------------------------------- 345 (586)
T KOG0667|consen 307 ELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQRV----------------------------------------- 345 (586)
T ss_pred hCCeeeccCChhheeeccCCcCceeEEecccccccCCcc-----------------------------------------
Confidence 9999999999999999843 479999999885432110
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchh
Q 004989 217 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYR 296 (720)
Q Consensus 217 ~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwS 296 (720)
..++.+..|+|||++.|.+|+.+.||||
T Consensus 346 ----------------------------------------------------ytYiQSRfYRAPEVILGlpY~~~IDmWS 373 (586)
T KOG0667|consen 346 ----------------------------------------------------YTYIQSRFYRAPEVILGLPYDTAIDMWS 373 (586)
T ss_pred ----------------------------------------------------eeeeeccccccchhhccCCCCCccceee
Confidence 0146688999999999999999999999
Q ss_pred hhchhhhccc--cCCCCchHHHHHHHhhc--CCCCccccc----------------------------------------
Q 004989 297 LGVLLFELFC--PFSTGEEKTRTMSSLRH--RVLPPQLLL---------------------------------------- 332 (720)
Q Consensus 297 LGvll~eLlt--pf~~~~~~~~~~~~l~~--~~~p~~~~~---------------------------------------- 332 (720)
||||++||++ |+.+.+.....+..|.. +.+|+.++.
T Consensus 374 LGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~ 453 (586)
T KOG0667|consen 374 LGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKA 453 (586)
T ss_pred hhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHhccccceehhccCCceeeeeeecccccccchhhhhhhhhh
Confidence 9999999999 44333322222222211 111110000
Q ss_pred ----cCc----------------hHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 333 ----KFP----------------KEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 333 ----~~p----------------~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
..| ...+|+++||.+||..|+|+.++|+||||...
T Consensus 454 ~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp~qal~Hpfl~~~ 508 (586)
T KOG0667|consen 454 RLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERITPAQALNHPFLTGT 508 (586)
T ss_pred cccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCCHHHHhcCcccccc
Confidence 001 12499999999999999999999999999965
No 104
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=99.97 E-value=2.7e-31 Score=286.25 Aligned_cols=202 Identities=19% Similarity=0.219 Sum_probs=158.2
Q ss_pred hhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccC
Q 004989 69 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 147 (720)
Q Consensus 69 ~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDL 147 (720)
.++..++||||+++++ .+.... .+|++||| .|++|..++.+. ..+++..++.++.||+.||+|||++||+||||
T Consensus 48 ~~l~~~~hp~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~al~~lH~~givH~Dl 122 (325)
T cd05604 48 VLLKNVKHPFLVGLHY-SFQTTE---KLYFVLDFVNGGELFFHLQRE-RSFPEPRARFYAAEIASALGYLHSINIVYRDL 122 (325)
T ss_pred HHHHhCCCCCCccEEE-EEecCC---EEEEEEcCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCC
Confidence 4577899999999998 554443 57999999 899999988544 35999999999999999999999999999999
Q ss_pred CCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccccccc
Q 004989 148 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 227 (720)
Q Consensus 148 KP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q 227 (720)
||+|||++.++.+||+|||++...... .+
T Consensus 123 kp~NIll~~~~~~kL~DfG~~~~~~~~---------------------------------~~------------------ 151 (325)
T cd05604 123 KPENILLDSQGHVVLTDFGLCKEGIAQ---------------------------------SD------------------ 151 (325)
T ss_pred CHHHeEECCCCCEEEeecCCcccCCCC---------------------------------CC------------------
Confidence 999999999999999999987321000 00
Q ss_pred CCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhccc-
Q 004989 228 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 306 (720)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt- 306 (720)
.....+||+.|+|||++.+..++.++|||||||++|||++
T Consensus 152 ---------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G 192 (325)
T cd05604 152 ---------------------------------------TTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYG 192 (325)
T ss_pred ---------------------------------------CcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcC
Confidence 0011468999999999999889999999999999999999
Q ss_pred --cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCCh----HHHHcCcccCCC
Q 004989 307 --PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM----GELLQSEFLNEP 367 (720)
Q Consensus 307 --pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta----~eiL~hp~~~~~ 367 (720)
||...... ..+..+....+. ......+...+++.+||..+|.+||++ .+++.||||...
T Consensus 193 ~~pf~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h~~f~~~ 257 (325)
T cd05604 193 LPPFYCRDVA-EMYDNILHKPLV-LRPGASLTAWSILEELLEKDRQRRLGAKEDFLEIQEHPFFESL 257 (325)
T ss_pred CCCCCCCCHH-HHHHHHHcCCcc-CCCCCCHHHHHHHHHHhccCHHhcCCCCCCHHHHhcCCCcCCC
Confidence 66654433 333333332211 111233445599999999999999976 589999999875
No 105
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.97 E-value=1.2e-31 Score=292.31 Aligned_cols=209 Identities=20% Similarity=0.229 Sum_probs=177.9
Q ss_pred hhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 62 LRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 62 ~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
-|...|+.+|..|+|||||++|+.|..... ..+.+|.|+ ..|+|++|+++.++ ++...++.|++||+.||.|||++
T Consensus 86 eR~~~Ev~lLKsL~H~NIirfy~SW~d~~n--~~in~iTEL~TSGtLr~Y~kk~~~-vn~kaik~W~RQILkGL~yLHs~ 162 (632)
T KOG0584|consen 86 ERLYSEVHLLKSLKHPNIIRFYDSWVDTDN--KTINFITELFTSGTLREYRKKHRR-VNIKAIKSWCRQILKGLVYLHSQ 162 (632)
T ss_pred HHHHHHHHHHccCCCCceeeeeeheecCCC--ceeeeeeecccCCcHHHHHHHhcc-CCHHHHHHHHHHHHHHhhhhhcC
Confidence 377788999999999999999995554443 467899999 99999999976655 99999999999999999999997
Q ss_pred --CceeccCCCCcEEEc-cCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCC
Q 004989 141 --GIVVHNVRPSCFVMS-SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 141 --gIvHrDLKP~NILl~-~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~ 217 (720)
.|||||||.+||+|+ ..|.|||.|+|+| ....
T Consensus 163 ~PPIIHRDLKCDNIFinG~~G~VKIGDLGLA---------------------------------------------tl~r 197 (632)
T KOG0584|consen 163 DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLA---------------------------------------------TLLR 197 (632)
T ss_pred CCCccccccccceEEEcCCcCceeecchhHH---------------------------------------------HHhh
Confidence 699999999999998 5688999666665 2211
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhh
Q 004989 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRL 297 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSL 297 (720)
.. .....+|||.|||||++. ..|...+|||||
T Consensus 198 ~s-----------------------------------------------~aksvIGTPEFMAPEmYE-E~YnE~VDVYaF 229 (632)
T KOG0584|consen 198 KS-----------------------------------------------HAKSVIGTPEFMAPEMYE-ENYNELVDVYAF 229 (632)
T ss_pred cc-----------------------------------------------ccceeccCccccChHHHh-hhcchhhhhhhh
Confidence 10 011258999999999997 449999999999
Q ss_pred hchhhhccc---cCCCCchHHHHHHHhhcCCCCccccc-cCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 298 GVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 298 Gvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~-~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|+.+.||+| ||........+++.+..++.|..+.. ..|...+||.+||.. .+.|||+.|+|.||||...
T Consensus 230 GMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~sl~kV~dPevr~fIekCl~~-~~~R~sa~eLL~d~Ff~~d 302 (632)
T KOG0584|consen 230 GMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPAALSKVKDPEVREFIEKCLAT-KSERLSAKELLKDPFFDED 302 (632)
T ss_pred hHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHHHhhccCCHHHHHHHHHHhcC-chhccCHHHHhhChhhccc
Confidence 999999999 89888889999999999999887755 456677999999999 9999999999999999986
No 106
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.97 E-value=3.6e-31 Score=286.36 Aligned_cols=207 Identities=18% Similarity=0.202 Sum_probs=158.5
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ- 140 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~- 140 (720)
+..+|..+|.+++||||+++++ ++.... .+|++||| .|++|.+++...+ .+++..+..++.||+.||.|||+.
T Consensus 49 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~l~~~l~~lH~~~ 123 (333)
T cd06650 49 QIIRELQVLHECNSPYIVGFYG-AFYSDG---EISICMEHMDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLREKH 123 (333)
T ss_pred HHHHHHHHHHHCCCCcccceeE-EEEECC---EEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhcC
Confidence 4457888999999999999999 554443 67999999 8999999995543 489999999999999999999985
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
+|+||||||+|||++.++.+||+|||++......
T Consensus 124 ~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~---------------------------------------------- 157 (333)
T cd06650 124 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---------------------------------------------- 157 (333)
T ss_pred CEEecCCChhhEEEcCCCCEEEeeCCcchhhhhh----------------------------------------------
Confidence 7999999999999999999999999887321000
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhch
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
......||+.|+|||++.+..++.++|||||||+
T Consensus 158 ----------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~i 191 (333)
T cd06650 158 ----------------------------------------------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLS 191 (333)
T ss_pred ----------------------------------------------ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHH
Confidence 0001367899999999998889999999999999
Q ss_pred hhhccc---cCCCCchHHHH--H-----------------------------------------HHhhcCCCCcccc-c-
Q 004989 301 LFELFC---PFSTGEEKTRT--M-----------------------------------------SSLRHRVLPPQLL-L- 332 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~--~-----------------------------------------~~l~~~~~p~~~~-~- 332 (720)
+|||++ ||......... + ..+... .++.+. .
T Consensus 192 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 270 (333)
T cd06650 192 LVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNE-PPPKLPSGV 270 (333)
T ss_pred HHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCccchhhhhcccccccccHHHHHHHHhcC-CCccCCCCC
Confidence 999999 56543221100 0 000000 111111 1
Q ss_pred cCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 333 KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 333 ~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
..+...+|+.+||++||++|||+.|++.||||+..
T Consensus 271 ~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~~~~ 305 (333)
T cd06650 271 FGAEFQDFVNKCLIKNPAERADLKQLMVHAFIKRS 305 (333)
T ss_pred cCHHHHHHHHHhccCCcccCcCHHHHhhCHHHhcC
Confidence 12334599999999999999999999999999865
No 107
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=99.97 E-value=5.2e-31 Score=283.89 Aligned_cols=203 Identities=15% Similarity=0.189 Sum_probs=158.6
Q ss_pred hhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCcee
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
+...++..++||||+++++ ++.... .+|+|||| .|++|..++... .+++..++.++.||+.||.|||++||+|
T Consensus 51 ~~~~~~~~l~hp~i~~~~~-~~~~~~---~~~lv~E~~~~~~L~~~~~~~--~l~~~~~~~~~~qi~~al~~lH~~~ivH 124 (324)
T cd05589 51 RIFETANSERHPFLVNLFA-CFQTED---HVCFVMEYAAGGDLMMHIHTD--VFSEPRAVFYAACVVLGLQYLHENKIVY 124 (324)
T ss_pred HHHHhccccCCCChhceee-EEEcCC---EEEEEEcCCCCCcHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeEe
Confidence 3344567889999999999 555543 67999999 899999988542 4999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccc
Q 004989 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+|||++.++.+||+|||++.......
T Consensus 125 rdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~------------------------------------------------- 155 (324)
T cd05589 125 RDLKLDNLLLDTEGFVKIADFGLCKEGMGFG------------------------------------------------- 155 (324)
T ss_pred cCCCHHHeEECCCCcEEeCcccCCccCCCCC-------------------------------------------------
Confidence 9999999999999999999998873210000
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhc
Q 004989 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 304 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eL 304 (720)
......+||+.|+|||.+.+..++.++|||||||++|||
T Consensus 156 -----------------------------------------~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el 194 (324)
T cd05589 156 -----------------------------------------DRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEM 194 (324)
T ss_pred -----------------------------------------CcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHH
Confidence 000114689999999999988899999999999999999
Q ss_pred cc---cCCCCchHHHHHHHhhcCCCCcccccc-CchHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC
Q 004989 305 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLK-FPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 367 (720)
Q Consensus 305 lt---pf~~~~~~~~~~~~l~~~~~p~~~~~~-~p~~~~Li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~ 367 (720)
++ ||...... .....+..... .++.. .+...+||.+||+.||.+|| ++.++++||||...
T Consensus 195 ~~G~~pf~~~~~~-~~~~~i~~~~~--~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~~f~~~ 263 (324)
T cd05589 195 LVGESPFPGDDEE-EVFDSIVNDEV--RYPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQPFFRDI 263 (324)
T ss_pred HhCCCCCCCCCHH-HHHHHHHhCCC--CCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCCCcCCC
Confidence 99 66654443 23333332211 11122 34456999999999999999 69999999999875
No 108
>PHA03207 serine/threonine kinase US3; Provisional
Probab=99.97 E-value=3.3e-31 Score=293.21 Aligned_cols=210 Identities=15% Similarity=0.170 Sum_probs=158.6
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCcee
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.+|..+|.+++|||||++++ ++.... .+|++||+.+++|.+++.. ...+++.+++.|+.||+.||.|||++||||
T Consensus 134 ~~E~~il~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~l~~~l~~-~~~l~~~~~~~i~~ql~~aL~~LH~~givH 208 (392)
T PHA03207 134 GREIDILKTISHRAIINLIH-AYRWKS---TVCMVMPKYKCDLFTYVDR-SGPLPLEQAITIQRRLLEALAYLHGRGIIH 208 (392)
T ss_pred HHHHHHHHhcCCCCccceee-eEeeCC---EEEEEehhcCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 47888999999999999999 554433 6799999977899999943 345999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccc
Q 004989 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+|||++.++.++|+|||++.........
T Consensus 209 rDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~----------------------------------------------- 241 (392)
T PHA03207 209 RDVKTENIFLDEPENAVLGDFGAACKLDAHPDT----------------------------------------------- 241 (392)
T ss_pred cCCCHHHEEEcCCCCEEEccCccccccCccccc-----------------------------------------------
Confidence 999999999999999999999987432111000
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhc
Q 004989 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 304 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eL 304 (720)
.......||+.|+|||++.+..++.++|||||||++|||
T Consensus 242 -----------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el 280 (392)
T PHA03207 242 -----------------------------------------PQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEM 280 (392)
T ss_pred -----------------------------------------ccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHH
Confidence 000114689999999999988899999999999999999
Q ss_pred cc---cCCCCchH------HHHHHHhhc----------------------CCCCcc----cc---ccCchHHHHHHHcCC
Q 004989 305 FC---PFSTGEEK------TRTMSSLRH----------------------RVLPPQ----LL---LKFPKEASFCLWLLH 346 (720)
Q Consensus 305 lt---pf~~~~~~------~~~~~~l~~----------------------~~~p~~----~~---~~~p~~~~Li~~~L~ 346 (720)
++ ||.+.... ......+.. ...++. .. ....+..+||.+||+
T Consensus 281 ~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~ 360 (392)
T PHA03207 281 SVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLT 360 (392)
T ss_pred HHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhc
Confidence 98 66543210 011111100 000000 00 011234489999999
Q ss_pred CCCCCCCChHHHHcCcccCCC
Q 004989 347 PEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 347 ~dP~~Rpta~eiL~hp~~~~~ 367 (720)
+||.+|||+.|+|.||||...
T Consensus 361 ~dp~~Rpsa~e~l~~p~f~~~ 381 (392)
T PHA03207 361 FDQEFRPSAQDILSLPLFTKE 381 (392)
T ss_pred cChhhCCCHHHHhhCchhhcc
Confidence 999999999999999999865
No 109
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=99.97 E-value=7.2e-31 Score=272.81 Aligned_cols=209 Identities=18% Similarity=0.207 Sum_probs=162.2
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
..++|..++.+++||||+++++ +++... .+++++|| .|++|.+++.... .+++..++.++.||+.||.|||+.|
T Consensus 50 ~~~~e~~~l~~l~~~~i~~~~~-~~~~~~---~~~~v~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lH~~~ 124 (263)
T cd06625 50 ALECEIQLLKNLQHERIVQYYG-CLRDDE---TLSIFMEYMPGGSVKDQLKAYG-ALTETVTRKYTRQILEGVEYLHSNM 124 (263)
T ss_pred HHHHHHHHHHhCCCCCeeeeEE-EEccCC---eEEEEEEECCCCcHHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3447778999999999999999 554443 68999999 8999999995543 4899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||+|+||+++.++.++|+|||.+......... ..
T Consensus 125 i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~~-------------------------------~~----------- 162 (263)
T cd06625 125 IVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSS-------------------------------GT----------- 162 (263)
T ss_pred eecCCCCHHHEEEcCCCCEEEeecccceeccccccc-------------------------------cc-----------
Confidence 999999999999999999999999987432110000 00
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......|+..|+|||++.+..++.++|||||||++
T Consensus 163 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 197 (263)
T cd06625 163 ---------------------------------------------GMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTV 197 (263)
T ss_pred ---------------------------------------------cccCCCcCccccCcceeccCCCCchhhhHHHHHHH
Confidence 00013568899999999998899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
|||++ ||........... .......+.+.... +...+|+.+||..+|.+|||+.++++||||
T Consensus 198 ~el~~g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 263 (263)
T cd06625 198 VEMLTEKPPWAEFEAMAAIFK-IATQPTNPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRHFFV 263 (263)
T ss_pred HHHHhCCCCccccchHHHHHH-HhccCCCCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhCCCC
Confidence 99999 5655444333333 22222233333333 445599999999999999999999999997
No 110
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=99.97 E-value=4.5e-31 Score=284.28 Aligned_cols=205 Identities=17% Similarity=0.230 Sum_probs=158.2
Q ss_pred hhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 66 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.|..++..+ .||+|+++++ ++.... .+|+|||| .+++|.+++.... .+++.+++.++.||+.||.|||++||+
T Consensus 49 ~e~~~l~~~~~~~~i~~~~~-~~~~~~---~~~lv~E~~~~g~L~~~~~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~iv 123 (323)
T cd05616 49 VEKRVLALSGKPPFLTQLHS-CFQTMD---RLYFVMEYVNGGDLMYQIQQVG-RFKEPHAVFYAAEIAIGLFFLHSKGII 123 (323)
T ss_pred HHHHHHHhccCCCeEeeEEE-EEecCC---EEEEEEcCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCEE
Confidence 455555554 5888999988 555543 57999999 8999999995543 489999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.+||+|||++....... .
T Consensus 124 HrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~----------------------------------~------------- 156 (323)
T cd05616 124 YRDLKLDNVMLDSEGHIKIADFGMCKENMWDG----------------------------------V------------- 156 (323)
T ss_pred ecCCCHHHeEECCCCcEEEccCCCceecCCCC----------------------------------C-------------
Confidence 99999999999999999999998874211100 0
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......||+.|+|||++.+..++.++|||||||++||
T Consensus 157 -------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~e 193 (323)
T cd05616 157 -------------------------------------------TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYE 193 (323)
T ss_pred -------------------------------------------ccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHH
Confidence 0011468999999999999989999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCCh-----HHHHcCcccCCC
Q 004989 304 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM-----GELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta-----~eiL~hp~~~~~ 367 (720)
|++ ||...... .....+...... ......++..+|+.+||+.+|.+|+++ .++++||||...
T Consensus 194 lltg~~Pf~~~~~~-~~~~~i~~~~~~-~p~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~~~~~ 263 (323)
T cd05616 194 MLAGQAPFEGEDED-ELFQSIMEHNVA-YPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYI 263 (323)
T ss_pred HHhCCCCCCCCCHH-HHHHHHHhCCCC-CCCcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcCCCcCCC
Confidence 999 66655443 333333332211 111233455699999999999999974 899999999875
No 111
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=99.97 E-value=6.3e-31 Score=281.02 Aligned_cols=210 Identities=14% Similarity=0.197 Sum_probs=159.0
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..+|..++.+++||||+++++ ++..+. .+|++|||.+++|.+++...+..+++..++.++.||+.||.|||++||+
T Consensus 51 ~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~iv 126 (309)
T cd07872 51 AIREVSLLKDLKHANIVTLHD-IVHTDK---SLTLVFEYLDKDLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVL 126 (309)
T ss_pred HHHHHHHHHhCCCCCcceEEE-EEeeCC---eEEEEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 346778999999999999999 554443 5799999966799999966555689999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.++|+|||++........
T Consensus 127 H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~----------------------------------------------- 159 (309)
T cd07872 127 HRDLKPQNLLINERGELKLADFGLARAKSVPTK----------------------------------------------- 159 (309)
T ss_pred cCCCCHHHEEECCCCCEEECccccceecCCCcc-----------------------------------------------
Confidence 999999999999999999999988733211100
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC-CCCccccchhhhchhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLF 302 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGvll~ 302 (720)
......+|+.|+|||++.+. .++.++|||||||++|
T Consensus 160 -------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~ 196 (309)
T cd07872 160 -------------------------------------------TYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFF 196 (309)
T ss_pred -------------------------------------------ccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHH
Confidence 00013568999999998764 4899999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhc--C------------------CCCcc--------ccccCchHHHHHHHcCCCCCCC
Q 004989 303 ELFC---PFSTGEEKTRTMSSLRH--R------------------VLPPQ--------LLLKFPKEASFCLWLLHPEPSG 351 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~--~------------------~~p~~--------~~~~~p~~~~Li~~~L~~dP~~ 351 (720)
||++ ||............... . ..+.. .....+...+||.+||+.||.+
T Consensus 197 el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~ 276 (309)
T cd07872 197 EMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKK 276 (309)
T ss_pred HHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhh
Confidence 9999 56554332211111110 0 00100 0112234459999999999999
Q ss_pred CCChHHHHcCcccCCC
Q 004989 352 RPKMGELLQSEFLNEP 367 (720)
Q Consensus 352 Rpta~eiL~hp~~~~~ 367 (720)
|||+.|+|+||||+..
T Consensus 277 R~t~~e~l~h~~~~~~ 292 (309)
T cd07872 277 RISAEEAMKHAYFRSL 292 (309)
T ss_pred CCCHHHHhcChhhhhc
Confidence 9999999999999876
No 112
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=99.97 E-value=5.6e-31 Score=283.18 Aligned_cols=202 Identities=18% Similarity=0.233 Sum_probs=157.7
Q ss_pred hhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccC
Q 004989 69 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 147 (720)
Q Consensus 69 ~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDL 147 (720)
.++..++||||+++++ .+.+.. .+|+|||| .|++|..++.+. ..+++..++.++.||+.||.|||++||+||||
T Consensus 48 ~~l~~~~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dl 122 (321)
T cd05603 48 VLLKNLKHPFLVGLHY-SFQTAE---KLYFVLDYVNGGELFFHLQRE-RCFLEPRARFYAAEVASAIGYLHSLNIIYRDL 122 (321)
T ss_pred HHHHhCCCCCccceee-EEEcCC---EEEEEEcCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccC
Confidence 3578899999999998 554443 57999999 899999988543 34899999999999999999999999999999
Q ss_pred CCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccccccc
Q 004989 148 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 227 (720)
Q Consensus 148 KP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q 227 (720)
||+||+++.++.+||+|||++....... .
T Consensus 123 kp~NIll~~~~~~kl~Dfg~~~~~~~~~---------------------------------~------------------ 151 (321)
T cd05603 123 KPENILLDSQGHVVLTDFGLCKEGVEPE---------------------------------E------------------ 151 (321)
T ss_pred CHHHeEECCCCCEEEccCCCCccCCCCC---------------------------------C------------------
Confidence 9999999999999999998873210000 0
Q ss_pred CCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhccc-
Q 004989 228 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 306 (720)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt- 306 (720)
.....+||+.|+|||++.+..++.++|||||||++|||++
T Consensus 152 ---------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g 192 (321)
T cd05603 152 ---------------------------------------TTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYG 192 (321)
T ss_pred ---------------------------------------ccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcC
Confidence 0011468999999999998889999999999999999999
Q ss_pred --cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCCh----HHHHcCcccCCC
Q 004989 307 --PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM----GELLQSEFLNEP 367 (720)
Q Consensus 307 --pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta----~eiL~hp~~~~~ 367 (720)
||...+.. .....+...... ..........+++.+||+.||.+||++ .++++|+||...
T Consensus 193 ~~pf~~~~~~-~~~~~i~~~~~~-~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~~~~~~~ 257 (321)
T cd05603 193 LPPFYSRDVS-QMYDNILHKPLQ-LPGGKTVAACDLLVGLLHKDQRRRLGAKADFLEIKNHVFFSPI 257 (321)
T ss_pred CCCCCCCCHH-HHHHHHhcCCCC-CCCCCCHHHHHHHHHHccCCHhhcCCCCCCHHHHhCCCCcCCC
Confidence 66554433 333444333211 111233455699999999999999875 499999999875
No 113
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=99.97 E-value=4.6e-31 Score=284.79 Aligned_cols=206 Identities=16% Similarity=0.249 Sum_probs=158.3
Q ss_pred hhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 66 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.|..++.++ +||||+++++ ++.... .+|+|||| .|++|.+++.... .+++..++.++.||+.||.|||++||+
T Consensus 44 ~e~~~~~~~~~~~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~-~l~~~~~~~~~~qi~~al~~lH~~~iv 118 (327)
T cd05617 44 TEKHVFEQASSNPFLVGLHS-CFQTTS---RLFLVIEYVNGGDLMFHMQRQR-KLPEEHARFYAAEICIALNFLHERGII 118 (327)
T ss_pred HHHHHHHhhcCCCCEeeEEE-EEEeCC---EEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 555666666 6999999999 555543 58999999 8999999885443 499999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.+||+|||++....... +
T Consensus 119 HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~---------------------------------~-------------- 151 (327)
T cd05617 119 YRDLKLDNVLLDADGHIKLTDYGMCKEGLGPG---------------------------------D-------------- 151 (327)
T ss_pred ccCCCHHHEEEeCCCCEEEeccccceeccCCC---------------------------------C--------------
Confidence 99999999999999999999998873210000 0
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
.....+||+.|+|||++.+..++.++|||||||++||
T Consensus 152 -------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~e 188 (327)
T cd05617 152 -------------------------------------------TTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFE 188 (327)
T ss_pred -------------------------------------------ceecccCCcccCCHHHHCCCCCCchheeehhHHHHHH
Confidence 0011468999999999999889999999999999999
Q ss_pred ccc---cCCCC------chHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCC------hHHHHcCcccCCC
Q 004989 304 LFC---PFSTG------EEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPK------MGELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~------~~~~~~~~~l~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpt------a~eiL~hp~~~~~ 367 (720)
|++ ||... .........+.... ..++... +...+++.+||.+||.+|++ +.++++||||...
T Consensus 189 ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~--~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~~f~~~ 266 (327)
T cd05617 189 MMAGRSPFDIITDNPDMNTEDYLFQVILEKP--IRIPRFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHTFFRSI 266 (327)
T ss_pred HHhCCCCCCccCCCcccccHHHHHHHHHhCC--CCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCCCCCCC
Confidence 999 66421 11122233332221 1122222 44559999999999999997 4699999999986
Q ss_pred c
Q 004989 368 R 368 (720)
Q Consensus 368 ~ 368 (720)
.
T Consensus 267 ~ 267 (327)
T cd05617 267 D 267 (327)
T ss_pred C
Confidence 3
No 114
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=99.97 E-value=6.5e-31 Score=284.11 Aligned_cols=208 Identities=17% Similarity=0.243 Sum_probs=157.9
Q ss_pred hhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCcee
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|..++..++||||+++++ +++++. .+|+|||| .|++|.+++.+....+++..++.++.||+.||+|||++||+|
T Consensus 50 ~e~~~l~~~~~~~i~~~~~-~~~~~~---~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH 125 (331)
T cd05597 50 EERDVLVNGDRRWITNLHY-AFQDEN---NLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVH 125 (331)
T ss_pred HHHHHHHhCCCCCCCceEE-EEecCC---eEEEEEecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEE
Confidence 5666788899999999999 555543 67999999 899999999665556999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccc
Q 004989 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+|||++.++.++|+|||++........
T Consensus 126 ~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~------------------------------------------------ 157 (331)
T cd05597 126 RDIKPDNVLLDKNGHIRLADFGSCLRLLADGT------------------------------------------------ 157 (331)
T ss_pred CCCCHHHEEECCCCCEEEEECCceeecCCCCC------------------------------------------------
Confidence 99999999999999999999998743211000
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC-----CCCCccccchhhhc
Q 004989 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-----APVSCASDIYRLGV 299 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-----~~~s~~sDIwSLGv 299 (720)
......+||+.|+|||++.+ ..++.++|||||||
T Consensus 158 -----------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~ 196 (331)
T cd05597 158 -----------------------------------------VQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGV 196 (331)
T ss_pred -----------------------------------------ccccceeccccccCHHHHhhccccccCCCCcceeehhhh
Confidence 00011368999999999963 34788999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhc----CCCCccccccCchHHHHHHHcCCCCCCC--CCChHHHHcCcccCCC
Q 004989 300 LLFELFC---PFSTGEEKTRTMSSLRH----RVLPPQLLLKFPKEASFCLWLLHPEPSG--RPKMGELLQSEFLNEP 367 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~----~~~p~~~~~~~p~~~~Li~~~L~~dP~~--Rpta~eiL~hp~~~~~ 367 (720)
++|||++ ||...... ..+..+.. ..+++......+...+|+.+||..++.. |+++.++++||||...
T Consensus 197 ~l~el~~g~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~hp~~~~~ 272 (331)
T cd05597 197 CMYEMLYGETPFYAESLV-ETYGKIMNHKEHFQFPPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDHPFFEGI 272 (331)
T ss_pred HHHHHhhCCCCCCCCCHH-HHHHHHHcCCCcccCCCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCCCCCCC
Confidence 9999999 66554333 22222222 1223332223344569999988764443 7899999999999875
No 115
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=99.97 E-value=7.8e-31 Score=277.14 Aligned_cols=206 Identities=16% Similarity=0.216 Sum_probs=160.9
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
.+|..++.+++||||+++++ .+..+. .+|++||| .+++|.+++.. ....+++..+..++.||+.||.|||+.||
T Consensus 48 ~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i 123 (285)
T cd05605 48 LNEKQILEKVNSRFVVSLAY-AYETKD---ALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERI 123 (285)
T ss_pred HHHHHHHHhcCCCCEeeeee-eecCCC---eEEEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 46788999999999999999 454443 67999999 89999998843 33458999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.++|+|||.+.......
T Consensus 124 vH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~----------------------------------------------- 156 (285)
T cd05605 124 VYRDLKPENILLDDYGHIRISDLGLAVEIPEGE----------------------------------------------- 156 (285)
T ss_pred EecCCCHHHEEECCCCCEEEeeCCCceecCCCC-----------------------------------------------
Confidence 999999999999999999999988763210000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......|++.|+|||++.+..++.++||||+||++|
T Consensus 157 --------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~ 192 (285)
T cd05605 157 --------------------------------------------TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIY 192 (285)
T ss_pred --------------------------------------------ccccccCCCCccCcHHhcCCCCCccccchhHHHHHH
Confidence 000136799999999999888999999999999999
Q ss_pred hccc---cCCCCchHH---HHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC
Q 004989 303 ELFC---PFSTGEEKT---RTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 367 (720)
Q Consensus 303 eLlt---pf~~~~~~~---~~~~~l~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~ 367 (720)
||++ ||....... .....+... ++.+.... +...+||.+||+.||.+|| +++++++||||...
T Consensus 193 el~~g~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~ 267 (285)
T cd05605 193 EMIEGKSPFRQRKEKVKREEVERRVKED--QEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFRTA 267 (285)
T ss_pred HHHHCCCCCCCCchhhHHHHHHHHhhhc--ccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcCcCccCC
Confidence 9998 666543221 122222211 12222223 3446999999999999999 89999999999875
No 116
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=99.97 E-value=6.6e-31 Score=276.70 Aligned_cols=206 Identities=17% Similarity=0.228 Sum_probs=155.9
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCcee
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.+|..++++++||||+++++ ++.+.. .+|+++||.+++|.+++......+++..++.++.||+.||.|||++||+|
T Consensus 47 ~~ei~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H 122 (284)
T cd07839 47 LREICLLKELKHKNIVRLYD-VLHSDK---KLTLVFEYCDQDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLH 122 (284)
T ss_pred hHHHHHHHhcCCCCeeeHHH-HhccCC---ceEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEec
Confidence 35777999999999999999 444433 57999999777999988655556999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccc
Q 004989 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+||+++.++.++|+|||.+...+.... .
T Consensus 123 ~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~--------------------------------~--------------- 155 (284)
T cd07839 123 RDLKPQNLLINKNGELKLADFGLARAFGIPVR--------------------------------C--------------- 155 (284)
T ss_pred CCCCHHHEEEcCCCcEEECccchhhccCCCCC--------------------------------C---------------
Confidence 99999999999999999999998743321100 0
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC-CCccccchhhhchhhh
Q 004989 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFE 303 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGvll~e 303 (720)
.....+++.|+|||.+.+.. ++.++|||||||++||
T Consensus 156 -------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ 192 (284)
T cd07839 156 -------------------------------------------YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAE 192 (284)
T ss_pred -------------------------------------------cCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHH
Confidence 00135688999999987755 7999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhc-------------------CCCCc---------cccccCchHHHHHHHcCCCCCCCC
Q 004989 304 LFC---PFSTGEEKTRTMSSLRH-------------------RVLPP---------QLLLKFPKEASFCLWLLHPEPSGR 352 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~-------------------~~~p~---------~~~~~~p~~~~Li~~~L~~dP~~R 352 (720)
|++ ||.+..........+.. ...+. ......+...+|+.+||+.||.+|
T Consensus 193 l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R 272 (284)
T cd07839 193 LANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQR 272 (284)
T ss_pred HHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhc
Confidence 998 54433322222211110 00000 001122344599999999999999
Q ss_pred CChHHHHcCccc
Q 004989 353 PKMGELLQSEFL 364 (720)
Q Consensus 353 pta~eiL~hp~~ 364 (720)
||+++++.||||
T Consensus 273 ~t~~~il~h~~f 284 (284)
T cd07839 273 ISAEEALQHPYF 284 (284)
T ss_pred CCHHHHhcCCCC
Confidence 999999999997
No 117
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=99.97 E-value=6.6e-31 Score=288.60 Aligned_cols=207 Identities=16% Similarity=0.207 Sum_probs=157.4
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..++..++||||+++++ .+.++. .+|+|||| .|++|.+++... .+++..++.++.||+.||.|||++||+
T Consensus 91 ~~e~~i~~~~~hp~iv~~~~-~~~~~~---~~~lv~Ey~~gg~L~~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~iv 164 (371)
T cd05622 91 WEERDIMAFANSPWVVQLFY-AFQDDR---YLYMVMEYMPGGDLVNLMSNY--DVPEKWARFYTAEVVLALDAIHSMGFI 164 (371)
T ss_pred HHHHHHHHhCCCCCCCeEEE-EEEcCC---EEEEEEcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCCEE
Confidence 35677888999999999999 554443 68999999 899999998543 389999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++++||+|||++........
T Consensus 165 HrDLkp~NIll~~~~~ikL~DfG~a~~~~~~~~----------------------------------------------- 197 (371)
T cd05622 165 HRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGM----------------------------------------------- 197 (371)
T ss_pred eCCCCHHHEEECCCCCEEEEeCCceeEcCcCCc-----------------------------------------------
Confidence 999999999999999999999998743211000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC----CCccccchhhhc
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP----VSCASDIYRLGV 299 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~----~s~~sDIwSLGv 299 (720)
......+||+.|+|||++.+.. ++.++|||||||
T Consensus 198 ------------------------------------------~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGv 235 (371)
T cd05622 198 ------------------------------------------VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGV 235 (371)
T ss_pred ------------------------------------------ccccCcccCccccCHHHHhccCCCccCCCccceeehhH
Confidence 0001146899999999997543 789999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcCC--CC-ccccccCchHHHHHHHcCCCCCCC--CCChHHHHcCcccCCC
Q 004989 300 LLFELFC---PFSTGEEKTRTMSSLRHRV--LP-PQLLLKFPKEASFCLWLLHPEPSG--RPKMGELLQSEFLNEP 367 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~~~--~p-~~~~~~~p~~~~Li~~~L~~dP~~--Rpta~eiL~hp~~~~~ 367 (720)
++|||++ ||...... .....+.... ++ +......+...+||.+||..+|.+ |+++.++++||||...
T Consensus 236 ilyell~G~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~~~~~~ 310 (371)
T cd05622 236 FLYEMLVGDTPFYADSLV-GTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKND 310 (371)
T ss_pred HHHHHHhCCCCCCCCCHH-HHHHHHHcCCCcccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCcccCCC
Confidence 9999999 67654443 3334443322 11 111223344459999999844433 7899999999999875
No 118
>PTZ00284 protein kinase; Provisional
Probab=99.97 E-value=5.1e-31 Score=298.34 Aligned_cols=212 Identities=16% Similarity=0.207 Sum_probs=144.3
Q ss_pred CCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCceeccCCCCcEE
Q 004989 75 DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-QGIVVHNVRPSCFV 153 (720)
Q Consensus 75 ~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs-~gIvHrDLKP~NIL 153 (720)
+|++|+++++ ++.... .++|+|||+.|++|.+++.+.+ .+++..++.|+.||+.||+|||+ .|||||||||+|||
T Consensus 189 ~~~~i~~i~~-~~~~~~--~~~~iv~~~~g~~l~~~l~~~~-~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NIL 264 (467)
T PTZ00284 189 DRFPLMKIQR-YFQNET--GHMCIVMPKYGPCLLDWIMKHG-PFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENIL 264 (467)
T ss_pred cCcceeeeEE-EEEcCC--ceEEEEEeccCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEE
Confidence 3456888888 454332 3689999998999999995543 59999999999999999999998 59999999999999
Q ss_pred EccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCCCccc
Q 004989 154 MSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYG 233 (720)
Q Consensus 154 l~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~ 233 (720)
++.++... ++...... ......++++|||.+.....
T Consensus 265 l~~~~~~~--~~~~~~~~---------------------------~~~~~~vkl~DfG~~~~~~~--------------- 300 (467)
T PTZ00284 265 METSDTVV--DPVTNRAL---------------------------PPDPCRVRICDLGGCCDERH--------------- 300 (467)
T ss_pred EecCCccc--cccccccc---------------------------CCCCceEEECCCCccccCcc---------------
Confidence 98765311 11000000 00001234455554321000
Q ss_pred cccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhccc---cCCC
Q 004989 234 THVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFST 310 (720)
Q Consensus 234 ~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt---pf~~ 310 (720)
.....+||+.|+|||++.+..|+.++|||||||++|||++ ||..
T Consensus 301 ---------------------------------~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~ 347 (467)
T PTZ00284 301 ---------------------------------SRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDT 347 (467)
T ss_pred ---------------------------------ccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 0012478999999999999999999999999999999999 6655
Q ss_pred CchHHHH--HHHhhcCCCCcccc---------------------------------------ccCchHHHHHHHcCCCCC
Q 004989 311 GEEKTRT--MSSLRHRVLPPQLL---------------------------------------LKFPKEASFCLWLLHPEP 349 (720)
Q Consensus 311 ~~~~~~~--~~~l~~~~~p~~~~---------------------------------------~~~p~~~~Li~~~L~~dP 349 (720)
....... +..+. +.+|..+. ...+...+||.+||++||
T Consensus 348 ~~~~~~~~~i~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP 426 (467)
T PTZ00284 348 HDNLEHLHLMEKTL-GRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDR 426 (467)
T ss_pred CChHHHHHHHHHHc-CCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcCh
Confidence 4332111 11110 11111100 011234599999999999
Q ss_pred CCCCChHHHHcCcccCCCc
Q 004989 350 SGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 350 ~~Rpta~eiL~hp~~~~~~ 368 (720)
.+|||++|+|+||||....
T Consensus 427 ~~R~ta~e~L~Hp~~~~~~ 445 (467)
T PTZ00284 427 QKRLNARQMTTHPYVLKYY 445 (467)
T ss_pred hhCCCHHHHhcCccccccC
Confidence 9999999999999998753
No 119
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=99.97 E-value=7.4e-31 Score=286.17 Aligned_cols=207 Identities=21% Similarity=0.211 Sum_probs=156.2
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..+|..++||||+++++ ++.... .+|++||| .+++|.+.. ..++..+..++.||+.||.|||++||
T Consensus 119 ~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~~i 189 (353)
T PLN00034 119 ICREIEILRDVNHPNVVKCHD-MFDHNG---EIQVLLEFMDGGSLEGTH-----IADEQFLADVARQILSGIAYLHRRHI 189 (353)
T ss_pred HHHHHHHHHhCCCCCcceeee-EeccCC---eEEEEEecCCCCcccccc-----cCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence 347888999999999999999 554443 57999999 888886532 25788889999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.+||+|||++....... +
T Consensus 190 vHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~---------------------------------~------------- 223 (353)
T PLN00034 190 VHRDIKPSNLLINSAKNVKIADFGVSRILAQTM---------------------------------D------------- 223 (353)
T ss_pred eecCCCHHHEEEcCCCCEEEcccccceeccccc---------------------------------c-------------
Confidence 999999999999999999999998874321000 0
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC-----CCCCccccchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-----APVSCASDIYRL 297 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-----~~~s~~sDIwSL 297 (720)
.....+||..|+|||++.. ...+.++|||||
T Consensus 224 --------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~Dvwsl 259 (353)
T PLN00034 224 --------------------------------------------PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSL 259 (353)
T ss_pred --------------------------------------------cccccccCccccCccccccccccCcCCCcchhHHHH
Confidence 0001368999999999843 224679999999
Q ss_pred hchhhhccc---cCCCC--chHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004989 298 GVLLFELFC---PFSTG--EEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 298 Gvll~eLlt---pf~~~--~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
||++|||++ ||... ......+..+.....+.......+...+||.+||+.||++|||+.|+|+||||.....
T Consensus 260 Gvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp~~~~~~~ 336 (353)
T PLN00034 260 GVSILEFYLGRFPFGVGRQGDWASLMCAICMSQPPEAPATASREFRHFISCCLQREPAKRWSAMQLLQHPFILRAQP 336 (353)
T ss_pred HHHHHHHHhCCCCCCCCCCccHHHHHHHHhccCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcCcccccCCc
Confidence 999999999 66532 2222333333322222222233345569999999999999999999999999998743
No 120
>PHA03211 serine/threonine kinase US3; Provisional
Probab=99.97 E-value=8.1e-31 Score=294.16 Aligned_cols=210 Identities=15% Similarity=0.170 Sum_probs=157.6
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCcee
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.+|..+|++++|||||++++ ++..+. ..+++||+..++|.+++......+++.+++.|+.||+.||.|||++||||
T Consensus 208 ~~E~~iL~~L~HpnIv~l~~-~~~~~~---~~~lv~e~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvH 283 (461)
T PHA03211 208 VHEARLLRRLSHPAVLALLD-VRVVGG---LTCLVLPKYRSDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIH 283 (461)
T ss_pred HHHHHHHHHCCCCCCCcEEE-EEEECC---EEEEEEEccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEE
Confidence 36888999999999999999 444432 57899999778999999665556999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccc
Q 004989 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+||||+.++.++|+|||+++....... ..
T Consensus 284 rDLKP~NILl~~~~~vkL~DFGla~~~~~~~~-------------------------------~~--------------- 317 (461)
T PHA03211 284 RDIKTENVLVNGPEDICLGDFGAACFARGSWS-------------------------------TP--------------- 317 (461)
T ss_pred CcCCHHHEEECCCCCEEEcccCCceecccccc-------------------------------cc---------------
Confidence 99999999999999999999988743210000 00
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhc
Q 004989 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 304 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eL 304 (720)
......||+.|+|||++.+..++.++|||||||+||||
T Consensus 318 ------------------------------------------~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El 355 (461)
T PHA03211 318 ------------------------------------------FHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEA 355 (461)
T ss_pred ------------------------------------------cccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHH
Confidence 00014689999999999998899999999999999999
Q ss_pred cc---cCCCCc-------hHHHHHHHhhcCC-----CCcc----------------------------ccccCchHHHHH
Q 004989 305 FC---PFSTGE-------EKTRTMSSLRHRV-----LPPQ----------------------------LLLKFPKEASFC 341 (720)
Q Consensus 305 lt---pf~~~~-------~~~~~~~~l~~~~-----~p~~----------------------------~~~~~p~~~~Li 341 (720)
++ ++.... ........+.... +++. +....+...+||
T Consensus 356 ~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli 435 (461)
T PHA03211 356 AVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLV 435 (461)
T ss_pred HHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHH
Confidence 87 222110 0111222222111 1110 001123455899
Q ss_pred HHcCCCCCCCCCChHHHHcCcccCC
Q 004989 342 LWLLHPEPSGRPKMGELLQSEFLNE 366 (720)
Q Consensus 342 ~~~L~~dP~~Rpta~eiL~hp~~~~ 366 (720)
.+||..||.+|||+.|+|+||||+.
T Consensus 436 ~~mL~~DP~~RPsa~elL~hp~f~~ 460 (461)
T PHA03211 436 CRALTFDGARRPSAAELLRLPLFQS 460 (461)
T ss_pred HHHcccChhhCcCHHHHhhCcccCC
Confidence 9999999999999999999999975
No 121
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=99.97 E-value=1.2e-30 Score=281.31 Aligned_cols=215 Identities=18% Similarity=0.158 Sum_probs=156.5
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
.+|..+++.++|||||++++ ++..+. .+|+|||| .+++|.+++... ...+++..++.++.||+.||+|||++||
T Consensus 47 ~~e~~~l~~l~hpniv~~~~-~~~~~~---~~~lv~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~i 122 (327)
T cd08227 47 QGELHVSKLFNHPNIVPYRA-TFIADN---ELWVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGY 122 (327)
T ss_pred HHHHHHHHhcCCCCeeeEEE-EEEECC---EEEEEEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence 36777899999999999999 554443 57999999 899999999542 3458999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.+++.||+.+... .++|.....
T Consensus 123 iH~dlkp~Nil~~~~~~~~l~~~~~~~~~------------------------------------~~~~~~~~~------ 160 (327)
T cd08227 123 VHRSVKASHILISVDGKVYLSGLRSNLSM------------------------------------INHGQRLRV------ 160 (327)
T ss_pred ecCCCChhhEEEecCCcEEEcccchhhcc------------------------------------ccccccccc------
Confidence 99999999999999999999988765221 011100000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC--CCCccccchhhhch
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA--PVSCASDIYRLGVL 300 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~--~~s~~sDIwSLGvl 300 (720)
..+ ++ ....++..|+|||++.+. .++.++|||||||+
T Consensus 161 ------------------------~~~--------------~~---~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~i 199 (327)
T cd08227 161 ------------------------VHD--------------FP---KYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGIT 199 (327)
T ss_pred ------------------------ccc--------------cc---ccccceecccChHHhhcccCCCCchhhHHHHHHH
Confidence 000 00 012467789999999763 48999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCC---------c------------------------------------cccc
Q 004989 301 LFELFC---PFSTGEEKTRTMSSLRHRVLP---------P------------------------------------QLLL 332 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p---------~------------------------------------~~~~ 332 (720)
+|||++ ||............+.. ..+ + ....
T Consensus 200 l~el~~g~~pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (327)
T cd08227 200 ACELANGHVPFKDMPATQMLLEKLNG-TVPCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRT 278 (327)
T ss_pred HHHHHHCCCCCCCcchhHHHHHHhcC-CccccccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccc
Confidence 999999 56543322222222111 000 0 0001
Q ss_pred cCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 333 KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 333 ~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
..+...+|+.+||++||++|||+.|+++||||+..
T Consensus 279 ~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~~~ 313 (327)
T cd08227 279 FSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQI 313 (327)
T ss_pred cCHHHHHHHHHHHhhCchhcCCHHHHhcChhhhhc
Confidence 12345599999999999999999999999999875
No 122
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=99.97 E-value=1.7e-31 Score=268.21 Aligned_cols=217 Identities=18% Similarity=0.207 Sum_probs=162.4
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHh----CCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLD----KPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~----~~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
..||..++..+.|||||.+..++...+. .+++++||...+|.+.|+ ...+.++...++.|+.||++||.|||+
T Consensus 74 AcREiaL~REl~h~nvi~Lv~Vfl~~d~---~v~l~fdYAEhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~ 150 (438)
T KOG0666|consen 74 ACREIALLRELKHPNVISLVKVFLSHDK---KVWLLFDYAEHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHS 150 (438)
T ss_pred HHHHHHHHHHhcCCcchhHHHHHhccCc---eEEEEehhhhhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhh
Confidence 3478889999999999999995555332 589999998899999993 234568999999999999999999999
Q ss_pred CCceeccCCCCcEEEccC----CceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccC
Q 004989 140 QGIVVHNVRPSCFVMSSF----NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 215 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~----~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~ 215 (720)
+=|+||||||.|||+..+ |.|||.|||+++.+..+-.. |
T Consensus 151 NWvlHRDLKPaNIlvmgdgperG~VKIaDlGlaR~~~~plkp--------------------------------l----- 193 (438)
T KOG0666|consen 151 NWVLHRDLKPANILVMGDGPERGRVKIADLGLARLFNNPLKP--------------------------------L----- 193 (438)
T ss_pred hheeeccCCcceEEEeccCCccCeeEeecccHHHHhhccccc--------------------------------c-----
Confidence 999999999999999977 89999888887665333100 0
Q ss_pred CCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC-CCccccc
Q 004989 216 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDI 294 (720)
Q Consensus 216 ~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDI 294 (720)
. .....+-|.||+|||++.|.. |+++.||
T Consensus 194 --------~------------------------------------------s~d~VVVTiWYRAPELLLGa~hYT~AiDv 223 (438)
T KOG0666|consen 194 --------A------------------------------------------SLDPVVVTIWYRAPELLLGARHYTKAIDV 223 (438)
T ss_pred --------c------------------------------------------cCCceEEEEEecChHHhcccccccchhhh
Confidence 0 001246799999999999988 9999999
Q ss_pred hhhhchhhhccc--cCC-CCch------------HHHHHHHhhc------------------------CCCCcc-c----
Q 004989 295 YRLGVLLFELFC--PFS-TGEE------------KTRTMSSLRH------------------------RVLPPQ-L---- 330 (720)
Q Consensus 295 wSLGvll~eLlt--pf~-~~~~------------~~~~~~~l~~------------------------~~~p~~-~---- 330 (720)
|++|||+.||++ |.. +.++ ..+++..+.. ....+. +
T Consensus 224 WAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~ 303 (438)
T KOG0666|consen 224 WAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYY 303 (438)
T ss_pred HHHHHHHHHHHccCccccchhhhcccCCCchHHHHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHH
Confidence 999999999999 532 2111 1112222211 000000 0
Q ss_pred ---cccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCccc
Q 004989 331 ---LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 331 ---~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
....|...+|+.+||.+||-+|.|++++|+|+||.+...+
T Consensus 304 ~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~yF~~d~lp 346 (438)
T KOG0666|consen 304 HKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHPYFTEDPLP 346 (438)
T ss_pred HHhcCCCchHHHHHHHHhccCchhhccHHHHhcccccccCCCC
Confidence 0022334589999999999999999999999999987443
No 123
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=1.1e-31 Score=310.41 Aligned_cols=220 Identities=19% Similarity=0.204 Sum_probs=177.8
Q ss_pred cchhhch-hhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHH
Q 004989 59 DFELRKH-SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYA 136 (720)
Q Consensus 59 ~~~~r~~-~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~y 136 (720)
...+... +|-.+|..++|||+|++|++ +.+...++|.||| .||+|.+.+ ..++..++...+.+..|++.||.|
T Consensus 1275 ~k~~~~i~eEm~vlE~lnHpNlV~YyGV----EvHRekv~IFMEyC~~GsLa~ll-~~gri~dE~vt~vyt~qll~gla~ 1349 (1509)
T KOG4645|consen 1275 HKTFKLIAEEMKVLEGLNHPNLVRYYGV----EVHREKVYIFMEYCEGGSLASLL-EHGRIEDEMVTRVYTKQLLEGLAY 1349 (1509)
T ss_pred cccCcchHHHHHHHHhccCccccccCce----eecHHHHHHHHHHhccCcHHHHH-HhcchhhhhHHHHHHHHHHHHHHH
Confidence 4444333 78889999999999999993 2333357999999 999999988 455558888999999999999999
Q ss_pred HHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCC
Q 004989 137 AHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 216 (720)
Q Consensus 137 LHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~ 216 (720)
||++|||||||||+||+|+.+|-+|+.|||.|...-..
T Consensus 1350 LH~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~------------------------------------------ 1387 (1509)
T KOG4645|consen 1350 LHEHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNN------------------------------------------ 1387 (1509)
T ss_pred HHhcCceecCCCccceeeecCCcEEeecccceeEecCc------------------------------------------
Confidence 99999999999999999999999999999988432111
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC---CCcccc
Q 004989 217 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP---VSCASD 293 (720)
Q Consensus 217 ~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~---~s~~sD 293 (720)
.+++|..-...+||+.|||||++.+.. ..-++|
T Consensus 1388 --------------------------------------------~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~D 1423 (1509)
T KOG4645|consen 1388 --------------------------------------------AQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAAD 1423 (1509)
T ss_pred --------------------------------------------hhcCCHHHHhhcCCchhcCchhhcccccCCCCcchh
Confidence 011111112368999999999997765 577999
Q ss_pred chhhhchhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004989 294 IYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 294 IwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
||||||++.||+| ||...+...++|..+..+..|+......+...+||..||..||+.|.++.|||+|-|-+...+
T Consensus 1424 iWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~gh~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~f~~~~~d 1502 (1509)
T KOG4645|consen 1424 IWSLGCVVLEMATGKRPWAELDNEWAIMYHVAAGHKPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEHAFGKSCTD 1502 (1509)
T ss_pred hhcccceEEEeecCCCchhhccchhHHHhHHhccCCCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHhhccccccc
Confidence 9999999999999 777777777888888877777666665566679999999999999999999999999776543
No 124
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=99.97 E-value=1.4e-30 Score=280.56 Aligned_cols=201 Identities=18% Similarity=0.237 Sum_probs=157.6
Q ss_pred hhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccC
Q 004989 69 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 147 (720)
Q Consensus 69 ~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDL 147 (720)
.++..++||||+++++ ++.... .+|++||| .|++|.+++... ..+++..++.++.||+.||.|||++||+||||
T Consensus 48 ~~l~~~~h~~Iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDl 122 (325)
T cd05602 48 VLLKNVKHPFLVGLHF-SFQTAD---KLYFVLDYINGGELFYHLQRE-RCFLEPRARFYAAEIASALGYLHSLNIVYRDL 122 (325)
T ss_pred HHHHhCCCCCCCceeE-EEEcCC---eEEEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCC
Confidence 4577899999999998 554443 57999999 899999999554 34899999999999999999999999999999
Q ss_pred CCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccccccc
Q 004989 148 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 227 (720)
Q Consensus 148 KP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q 227 (720)
||+|||++.++.++|+|||++....... .
T Consensus 123 kp~Nili~~~~~~kl~DfG~a~~~~~~~---------------------------------~------------------ 151 (325)
T cd05602 123 KPENILLDSQGHIVLTDFGLCKENIEHN---------------------------------G------------------ 151 (325)
T ss_pred CHHHeEECCCCCEEEccCCCCcccccCC---------------------------------C------------------
Confidence 9999999999999999998873210000 0
Q ss_pred CCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhccc-
Q 004989 228 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 306 (720)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt- 306 (720)
.....+||+.|+|||++.+..++.++|||||||++|||++
T Consensus 152 ---------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g 192 (325)
T cd05602 152 ---------------------------------------TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYG 192 (325)
T ss_pred ---------------------------------------CcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcC
Confidence 0011468999999999999889999999999999999999
Q ss_pred --cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChH----HHHcCcccCCC
Q 004989 307 --PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMG----ELLQSEFLNEP 367 (720)
Q Consensus 307 --pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~----eiL~hp~~~~~ 367 (720)
||...... ..+..+..... .+.... +...+|+.+||+.||.+||++. ++++|+||...
T Consensus 193 ~~pf~~~~~~-~~~~~i~~~~~--~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~i~~~~~~~~~ 257 (325)
T cd05602 193 LPPFYSRNTA-EMYDNILNKPL--QLKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKNHIFFSPI 257 (325)
T ss_pred CCCCCCCCHH-HHHHHHHhCCc--CCCCCCCHHHHHHHHHHcccCHHHCCCCCCCHHHHhcCcccCCC
Confidence 66654443 33334433221 122233 4445999999999999999876 89999999764
No 125
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=99.97 E-value=9.7e-31 Score=307.85 Aligned_cols=227 Identities=16% Similarity=0.167 Sum_probs=158.2
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~---~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
+...|+.+|.+++|||||++++.++.... ..+|+|||| .+++|.++|.. ....+++..++.|+.||+.||.|||
T Consensus 58 ~~~~EI~IL~~L~HPNIVrl~d~f~de~~--~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLH 135 (1021)
T PTZ00266 58 QLVIEVNVMRELKHKNIVRYIDRFLNKAN--QKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCH 135 (1021)
T ss_pred HHHHHHHHHHHcCCCCcCeEEEEEEecCC--CEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 34478889999999999999994443322 368999999 88999999943 2345999999999999999999999
Q ss_pred HC-------CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccc
Q 004989 139 SQ-------GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQ 211 (720)
Q Consensus 139 s~-------gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfg 211 (720)
+. +||||||||+||||+.... .+.+..... .....+..++|+|||
T Consensus 136 s~g~~~~~k~IVHRDLKPeNILL~s~~~-~lg~i~~~~---------------------------~n~ng~~iVKLsDFG 187 (1021)
T PTZ00266 136 NLKDGPNGERVLHRDLKPQNIFLSTGIR-HIGKITAQA---------------------------NNLNGRPIAKIGDFG 187 (1021)
T ss_pred hcccccccCCceeccCcHHHeEeecCcc-ccccccccc---------------------------cccCCCCceEEccCC
Confidence 84 4999999999999975321 000000000 000001123445555
Q ss_pred cccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC--CCC
Q 004989 212 LVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA--PVS 289 (720)
Q Consensus 212 la~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~--~~s 289 (720)
++....... .....+||+.|+|||++.+. .++
T Consensus 188 lAr~l~~~s----------------------------------------------~~~s~vGTp~YmAPEvL~ge~~~~s 221 (1021)
T PTZ00266 188 LSKNIGIES----------------------------------------------MAHSCVGTPYYWSPELLLHETKSYD 221 (1021)
T ss_pred ccccccccc----------------------------------------------cccccCCCccccCHHHHhccCCCCC
Confidence 543221100 00114689999999999653 389
Q ss_pred ccccchhhhchhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCC
Q 004989 290 CASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 366 (720)
Q Consensus 290 ~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~ 366 (720)
.++||||||||||||++ ||.........+..+..... ..+....+...+||..||..+|.+||++.|+|+||||..
T Consensus 222 ~KSDVWSLG~ILYELLTGk~PF~~~~~~~qli~~lk~~p~-lpi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik~ 300 (1021)
T PTZ00266 222 DKSDMWALGCIIYELCSGKTPFHKANNFSQLISELKRGPD-LPIKGKSKELNILIKNLLNLSAKERPSALQCLGYQIIKN 300 (1021)
T ss_pred chhHHHHHHHHHHHHHHCCCCCCcCCcHHHHHHHHhcCCC-CCcCCCCHHHHHHHHHHhcCChhHCcCHHHHhccHHHhh
Confidence 99999999999999999 77655554444444443321 112233455669999999999999999999999999963
No 126
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=99.97 E-value=1.4e-30 Score=275.31 Aligned_cols=207 Identities=15% Similarity=0.206 Sum_probs=159.5
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..|..++.+++|+||+.+++ .+.+.. .+|++||| .|++|.+++.. ....+++..+..++.||+.||.|||+.||
T Consensus 48 ~~E~~il~~l~~~~i~~~~~-~~~~~~---~~~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i 123 (285)
T cd05630 48 LNEKQILEKVNSRFVVSLAY-AYETKD---ALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERI 123 (285)
T ss_pred HHHHHHHHhCCCCCeeeeeE-EEecCC---EEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence 35778999999999999998 444443 68999999 89999999843 33458999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.++|+|||++.......
T Consensus 124 iH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~----------------------------------------------- 156 (285)
T cd05630 124 VYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ----------------------------------------------- 156 (285)
T ss_pred EeCCCCHHHEEECCCCCEEEeeccceeecCCCc-----------------------------------------------
Confidence 999999999999999999999998763210000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......||+.|+|||++.+..++.++|||||||++|
T Consensus 157 --------------------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~ 192 (285)
T cd05630 157 --------------------------------------------TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLY 192 (285)
T ss_pred --------------------------------------------cccCCCCCccccChHHHcCCCCCCccccHHHHHHHH
Confidence 000136799999999999888999999999999999
Q ss_pred hccc---cCCCCchH--HHHHHHhhcCCCCccccc-cCchHHHHHHHcCCCCCCCCCC-----hHHHHcCcccCCC
Q 004989 303 ELFC---PFSTGEEK--TRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEP 367 (720)
Q Consensus 303 eLlt---pf~~~~~~--~~~~~~l~~~~~p~~~~~-~~p~~~~Li~~~L~~dP~~Rpt-----a~eiL~hp~~~~~ 367 (720)
+|++ ||...... ......+.... +..+.. ..+...+|+.+||+.||++||| +.|+++||||.+.
T Consensus 193 ~l~~g~~Pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~~~ 267 (285)
T cd05630 193 EMIAGQSPFQQRKKKIKREEVERLVKEV-QEEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFKQI 267 (285)
T ss_pred HHHhCCCCCCCCCccchHHHHHhhhhhh-hhhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcChhhhcc
Confidence 9999 66543211 11111111111 111222 2344569999999999999999 8999999999875
No 127
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=99.97 E-value=1.6e-30 Score=281.05 Aligned_cols=208 Identities=15% Similarity=0.222 Sum_probs=159.5
Q ss_pred hhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCcee
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|..++..++||||+++++ .+.+.. .+|+|||| .|++|.+++.+....+++..++.++.||+.||+|||++||+|
T Consensus 50 ~e~~~l~~~~~~~i~~l~~-~~~~~~---~~~lv~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiH 125 (331)
T cd05624 50 EERNVLVNGDCQWITTLHY-AFQDEN---YLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVH 125 (331)
T ss_pred HHHHHHHhCCCCCEeeEEE-EEEcCC---EEEEEEeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeee
Confidence 5566788899999999999 555443 67999999 899999999664556999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccc
Q 004989 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+|||++.++.+||+|||++........
T Consensus 126 rDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~------------------------------------------------ 157 (331)
T cd05624 126 RDIKPDNVLLDMNGHIRLADFGSCLKMNQDGT------------------------------------------------ 157 (331)
T ss_pred ccCchHHEEEcCCCCEEEEeccceeeccCCCc------------------------------------------------
Confidence 99999999999999999999998743211100
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC-----CCCCccccchhhhc
Q 004989 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-----APVSCASDIYRLGV 299 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-----~~~s~~sDIwSLGv 299 (720)
.......||+.|+|||++.+ ..++.++|||||||
T Consensus 158 -----------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGv 196 (331)
T cd05624 158 -----------------------------------------VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGV 196 (331)
T ss_pred -----------------------------------------eeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeeh
Confidence 00011368999999999875 45789999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcC----CCCccccccCchHHHHHHHcCCCCCCC--CCChHHHHcCcccCCC
Q 004989 300 LLFELFC---PFSTGEEKTRTMSSLRHR----VLPPQLLLKFPKEASFCLWLLHPEPSG--RPKMGELLQSEFLNEP 367 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~~----~~p~~~~~~~p~~~~Li~~~L~~dP~~--Rpta~eiL~hp~~~~~ 367 (720)
+||||++ ||...... .....+... .+|+......+...+|+.+||..++.+ |++++++++||||...
T Consensus 197 il~ell~g~~Pf~~~~~~-~~~~~i~~~~~~~~~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h~~f~~~ 272 (331)
T cd05624 197 CMYEMLYGETPFYAESLV-ETYGKIMNHEERFQFPSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEGI 272 (331)
T ss_pred hhhhhhhCCCCccCCCHH-HHHHHHHcCCCcccCCCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcCCCcCCC
Confidence 9999999 67654443 233333221 123333223345559999999876654 4689999999999874
No 128
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=99.97 E-value=3.5e-30 Score=271.19 Aligned_cols=210 Identities=14% Similarity=0.152 Sum_probs=160.7
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++..++||||+++++ .+.... ..|++||| .+++|..++.+...++++..++.++.||+.||.|||+.||
T Consensus 49 ~~~e~~~l~~l~h~~ii~~~~-~~~~~~---~~~~v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i 124 (282)
T cd06643 49 YMVEIDILASCDHPNIVKLLD-AFYYEN---NLWILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKI 124 (282)
T ss_pred HHHHHHHHHHCCCCCeeeEEE-EEeeCC---EEEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 346777899999999999999 444432 57999999 8999999886555569999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.++++|||++....... .
T Consensus 125 ~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~---------------------------------~------------- 158 (282)
T cd06643 125 IHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI---------------------------------Q------------- 158 (282)
T ss_pred eecCCCcccEEEccCCCEEEccccccccccccc---------------------------------c-------------
Confidence 999999999999999999999998873221000 0
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCccccc-----CCCCCccccchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-----GAPVSCASDIYRL 297 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~-----~~~~s~~sDIwSL 297 (720)
......|++.|+|||++. +..++.++|||||
T Consensus 159 --------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~sl 194 (282)
T cd06643 159 --------------------------------------------RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSL 194 (282)
T ss_pred --------------------------------------------ccccccccccccCHhhccccCCCCCCCCccchhhhH
Confidence 000135788999999984 3347889999999
Q ss_pred hchhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 298 GVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 298 Gvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
||++|||++ ||......................+..++ ...+||.+||+.+|.+||++.++++||||...
T Consensus 195 Gvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 268 (282)
T cd06643 195 GITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHPFVTVN 268 (282)
T ss_pred HHHHHHHccCCCCccccCHHHHHHHHhhcCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCCCEecc
Confidence 999999998 66554443333332222111111222333 45599999999999999999999999999975
No 129
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=99.97 E-value=3.1e-30 Score=276.36 Aligned_cols=242 Identities=17% Similarity=0.189 Sum_probs=168.7
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+...|..+|..++||||+++++ .+.... .+|++||| .|++|.+++.+ .+..+++..++.++.||+.||.|||+.
T Consensus 47 ~~~~e~~~l~~l~~~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~ 122 (316)
T cd05574 47 RVLTEQEILATLDHPFLPTLYA-SFQTET---YLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLL 122 (316)
T ss_pred HHHHHHHHHHhCCCCCchhhee-eeecCC---EEEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHC
Confidence 4446778999999999999999 444433 67999999 89999999954 345699999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+|+||||+||+++.++.++|+|||++........... . . ...+...
T Consensus 123 ~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~---~-------------~----------~~~~~~~------ 170 (316)
T cd05574 123 GIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPVS---K-------------A----------LRKGSRR------ 170 (316)
T ss_pred CeeccCCChHHeEEcCCCCEEEeecchhhcccccccccc---c-------------c----------ccccccc------
Confidence 999999999999999999999999999854322100000 0 0 0000000
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhch
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
.... ....+.............+||..|+|||++.+..++.++|||||||+
T Consensus 171 -~~~~----------------------------~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~l 221 (316)
T cd05574 171 -SSVN----------------------------SIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGIL 221 (316)
T ss_pred -cccc----------------------------ccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHH
Confidence 0000 00000000000001122578999999999998889999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCC----hHHHHcCcccCCCcc
Q 004989 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK----MGELLQSEFLNEPRD 369 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpt----a~eiL~hp~~~~~~~ 369 (720)
+|+|++ ||............+......+......+...+|+.+||+.+|++||| ++|+|+||||+....
T Consensus 222 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~~~~~~~~ 297 (316)
T cd05574 222 LYEMLYGTTPFKGSNRDETFSNILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFFRGVNW 297 (316)
T ss_pred HHHHhhCCCCCCCCchHHHHHHHhcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCchhhcCCh
Confidence 999999 665544433333223222222222122344559999999999999999 999999999998643
No 130
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=99.97 E-value=2.6e-30 Score=269.35 Aligned_cols=213 Identities=17% Similarity=0.219 Sum_probs=163.3
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|++++||||+++++ ++.+. ..++++||| .|++|.+++.+.. .+++..++.++.||+.||.|||+.|
T Consensus 48 ~~~~e~~~l~~l~~~~i~~~~~-~~~~~---~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~ 122 (265)
T cd06631 48 KLQEEVDLLKSLKHVNIVQYLG-TCLDD---NTISIFMEFVPGGSISSILNRFG-PLPEPVFCKYTKQILDGVAYLHNNC 122 (265)
T ss_pred HHHHHHHHHHhcCCCCEeeEee-EeecC---CeEEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3446778999999999999999 55444 368999999 8999999995543 4899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+|+||||+||++++++.++|+|||.+......... ...
T Consensus 123 i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~------------------------------~~~----------- 161 (265)
T cd06631 123 VVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLH------------------------------GTH----------- 161 (265)
T ss_pred cccCCcCHHhEEECCCCeEEeccchhhHhhhhcccc------------------------------ccc-----------
Confidence 999999999999999999999999887432111000 000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
........|+..|+|||.+.+..++.++|||||||++
T Consensus 162 -------------------------------------------~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~ 198 (265)
T cd06631 162 -------------------------------------------SNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTV 198 (265)
T ss_pred -------------------------------------------cccccccCCCccccChhhhcCCCCcchhhHHHHHHHH
Confidence 0000013578999999999988899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccccCch-HHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~-~~~Li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
|+|++ ||...+...............+.+...++. ..+|+.+||+++|.+||++.++++||||
T Consensus 199 ~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~ 265 (265)
T cd06631 199 FEMATGKPPLASMDRLAAMFYIGAHRGLMPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLRHDFL 265 (265)
T ss_pred HHHHhCCCccccCChHHHHHHhhhccCCCCCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 99999 665544433333222222222333334444 4599999999999999999999999997
No 131
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=99.97 E-value=3.4e-30 Score=274.24 Aligned_cols=212 Identities=15% Similarity=0.184 Sum_probs=159.3
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
+..+|..++..++||||+++++ ++..+. .+|++|||.+++|.+++......+++..++.++.||+.||.|||+.||
T Consensus 50 ~~~~E~~~l~~l~h~nI~~~~~-~~~~~~---~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i 125 (301)
T cd07873 50 TAIREVSLLKDLKHANIVTLHD-IIHTEK---SLTLVFEYLDKDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKV 125 (301)
T ss_pred HHHHHHHHHHhcCCCCcceEEE-EEecCC---eEEEEEeccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 3446788999999999999999 554443 579999996679999996655668999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+|+||||+||+++.++.++|+|||.+........
T Consensus 126 ~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~---------------------------------------------- 159 (301)
T cd07873 126 LHRDLKPQNLLINERGELKLADFGLARAKSIPTK---------------------------------------------- 159 (301)
T ss_pred eCCCCCHHHEEECCCCcEEECcCcchhccCCCCC----------------------------------------------
Confidence 9999999999999999999999988733211100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC-CCccccchhhhchh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLL 301 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGvll 301 (720)
......+++.|+|||++.+.. ++.++|||||||++
T Consensus 160 --------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l 195 (301)
T cd07873 160 --------------------------------------------TYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIF 195 (301)
T ss_pred --------------------------------------------cccccceeecccCcHHHhCCCCCccHHHHHHHHHHH
Confidence 000124688999999987654 78899999999999
Q ss_pred hhccc---cCCCCchHHHHHH--HhhcC------------------CCCcc-------c-cccCchHHHHHHHcCCCCCC
Q 004989 302 FELFC---PFSTGEEKTRTMS--SLRHR------------------VLPPQ-------L-LLKFPKEASFCLWLLHPEPS 350 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~--~l~~~------------------~~p~~-------~-~~~~p~~~~Li~~~L~~dP~ 350 (720)
|||++ ||........... .+... ..+.. . ....+...+||.+||++||.
T Consensus 196 ~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~ 275 (301)
T cd07873 196 YEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGR 275 (301)
T ss_pred HHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcc
Confidence 99999 5654432211111 10000 00100 0 01223445999999999999
Q ss_pred CCCChHHHHcCcccCCCc
Q 004989 351 GRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 351 ~Rpta~eiL~hp~~~~~~ 368 (720)
+|||+.|+|+||||....
T Consensus 276 ~R~t~~eil~h~~f~~~~ 293 (301)
T cd07873 276 KRISAEEAMKHPYFHCLG 293 (301)
T ss_pred cCcCHHHHhcCccccccc
Confidence 999999999999998764
No 132
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=99.97 E-value=3.4e-30 Score=278.58 Aligned_cols=208 Identities=17% Similarity=0.227 Sum_probs=158.9
Q ss_pred hhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCcee
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|..++..++||||+++++ ++.+.. .+|+|||| .+++|.+++.+....+++..++.++.||+.||.|||++||+|
T Consensus 50 ~e~~~l~~~~~~~i~~~~~-~~~~~~---~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiH 125 (332)
T cd05623 50 EERDVLVNGDNQWITTLHY-AFQDEN---NLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVH 125 (332)
T ss_pred HHHHHHhhCCCCCEeeEEE-EEecCC---EEEEEEeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEe
Confidence 4566788899999999999 555543 67999999 899999999665556999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccc
Q 004989 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+|||++.++.++|+|||++....... .
T Consensus 126 rDlkp~Nili~~~~~~kL~DfG~a~~~~~~~---------------------------------~--------------- 157 (332)
T cd05623 126 RDIKPDNILMDMNGHIRLADFGSCLKLMEDG---------------------------------T--------------- 157 (332)
T ss_pred cCCCHHHEEECCCCCEEEeecchheecccCC---------------------------------c---------------
Confidence 9999999999999999999999873221000 0
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC-----CCCCccccchhhhc
Q 004989 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-----APVSCASDIYRLGV 299 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-----~~~s~~sDIwSLGv 299 (720)
......+||+.|+|||++.+ ..++.++|||||||
T Consensus 158 -----------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGv 196 (332)
T cd05623 158 -----------------------------------------VQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGV 196 (332)
T ss_pred -----------------------------------------ceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHH
Confidence 00011468999999999863 34899999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcC----CCCccccccCchHHHHHHHcCCCCCCC--CCChHHHHcCcccCCC
Q 004989 300 LLFELFC---PFSTGEEKTRTMSSLRHR----VLPPQLLLKFPKEASFCLWLLHPEPSG--RPKMGELLQSEFLNEP 367 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~~----~~p~~~~~~~p~~~~Li~~~L~~dP~~--Rpta~eiL~hp~~~~~ 367 (720)
++|||++ ||...... ..+..+... .+|.......+...+|+.+||..+|.. |+++.|+++||||...
T Consensus 197 il~ell~g~~Pf~~~~~~-~~~~~i~~~~~~~~~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h~~f~~~ 272 (332)
T cd05623 197 CMYEMLYGETPFYAESLV-ETYGKIMNHKERFQFPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQHPFFTGI 272 (332)
T ss_pred HHHHHhcCCCCCCCCCHH-HHHHHHhCCCccccCCCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCCCCcCCC
Confidence 9999999 67655443 333333322 123322233445559999999765544 6899999999999875
No 133
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=99.97 E-value=4.4e-30 Score=265.94 Aligned_cols=208 Identities=17% Similarity=0.243 Sum_probs=161.8
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
....|..++++++||||+++++ .+.... ..+|++||| .+++|.+++.. ....+++.+++.++.||+.||.|||+.
T Consensus 45 ~~~~e~~~l~~l~~~~i~~~~~-~~~~~~--~~~~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~ 121 (257)
T cd08223 45 AAEQEAQLLSQLKHPNIVAYRE-SWEGED--GLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEK 121 (257)
T ss_pred HHHHHHHHHHhCCCCCeeeeee-eecCCC--CEEEEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 3446777899999999999998 333221 257999999 88999999954 344589999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+||+++.++.++|+|||.+....... .
T Consensus 122 ~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~---------------------------------~----------- 157 (257)
T cd08223 122 HILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQC---------------------------------D----------- 157 (257)
T ss_pred CeeccCCCchhEEEecCCcEEEecccceEEecccC---------------------------------C-----------
Confidence 99999999999999999999999988873221100 0
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhch
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
......|++.|+|||++.+..++.++|||||||+
T Consensus 158 ----------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i 191 (257)
T cd08223 158 ----------------------------------------------MASTLIGTPYYMSPELFSNKPYNYKSDVWALGCC 191 (257)
T ss_pred ----------------------------------------------ccccccCCcCccChhHhcCCCCCchhhhHHHHHH
Confidence 0001357889999999998889999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004989 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
+|+|++ ||...+.. .....+....+++......+...+|+.+||.++|.+||++.++++||||
T Consensus 192 l~~l~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~ 257 (257)
T cd08223 192 VYEMATLKHAFNAKDMN-SLVYRIIEGKLPPMPKDYSPELGELIATMLSKRPEKRPSVKSILRQPYI 257 (257)
T ss_pred HHHHHcCCCCCCCCCHH-HHHHHHHhcCCCCCccccCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 999999 56544433 2333333343433322333555699999999999999999999999997
No 134
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=99.97 E-value=4e-30 Score=268.02 Aligned_cols=210 Identities=16% Similarity=0.217 Sum_probs=161.4
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++++++||||+++++ ++.... ..+++||| .+++|.+++... ..+++..+..++.||+.||.|||+.|+
T Consensus 53 ~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~l~~~l~~lH~~~i 127 (267)
T cd06628 53 LAREIALLKELQHENIVQYLG-SSLDAD---HLNIFLEYVPGGSVAALLNNY-GAFEETLVRNFVRQILKGLNYLHNRGI 127 (267)
T ss_pred HHHHHHHHHhcCCCCeeeEEE-EEEeCC---ccEEEEEecCCCCHHHHHHhc-cCccHHHHHHHHHHHHHHHHHHHhcCc
Confidence 347888999999999999999 444433 57899999 899999999554 448999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||+|+||++++++.++|+|||.+.......... ..
T Consensus 128 vH~di~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~------------------------------~~------------ 165 (267)
T cd06628 128 IHRDIKGANILVDNKGGIKISDFGISKKLEANSLST------------------------------KT------------ 165 (267)
T ss_pred ccccCCHHHEEEcCCCCEEecccCCCcccccccccC------------------------------Cc------------
Confidence 999999999999999999999998874432110000 00
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
........|+..|+|||.+.+..++.++|||||||++|
T Consensus 166 ------------------------------------------~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~ 203 (267)
T cd06628 166 ------------------------------------------NGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVV 203 (267)
T ss_pred ------------------------------------------cccccccCCCcCccChhHhccCCCCchhhhHHHHHHHH
Confidence 00001135788999999998888999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004989 303 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
+|++ ||........ ...+.....+ .+.... ....+||.+||++||.+||++.++++||||
T Consensus 204 ~l~~g~~p~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 267 (267)
T cd06628 204 EMLTGKHPFPDCTQLQA-IFKIGENASP-EIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKHPFL 267 (267)
T ss_pred HHhhCCCCCCCccHHHH-HHHHhccCCC-cCCcccCHHHHHHHHHHccCCchhCcCHHHHhhCCCC
Confidence 9999 6655444322 2233332222 233333 444599999999999999999999999997
No 135
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=99.97 E-value=3.7e-30 Score=270.94 Aligned_cols=206 Identities=17% Similarity=0.211 Sum_probs=155.3
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK--PKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~--~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..|..++.+++||||+++++ ++.++. .+|+||||..++|.+++.. .+..+++..++.++.||+.||.|||++||
T Consensus 47 ~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~~v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i 122 (285)
T cd07861 47 IREISLLKELQHPNIVCLQD-VLMQES---RLYLIFEFLSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRV 122 (285)
T ss_pred HHHHHHHHhcCCCCEeeeEE-EEeeCC---eEEEEEecCCCCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 36778999999999999999 454443 6799999966799999843 22458999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.++|+|||++...+.+..
T Consensus 123 ~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~---------------------------------------------- 156 (285)
T cd07861 123 LHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVR---------------------------------------------- 156 (285)
T ss_pred eecCCCHHHEEEcCCCcEEECcccceeecCCCcc----------------------------------------------
Confidence 9999999999999999999999988743221100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC-CCccccchhhhchh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLL 301 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGvll 301 (720)
......+++.|+|||.+.+.. ++.++|||||||++
T Consensus 157 --------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il 192 (285)
T cd07861 157 --------------------------------------------VYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIF 192 (285)
T ss_pred --------------------------------------------cccCCcccccccChHHhcCCCCcCcHHHHHHHHHHH
Confidence 000125688999999987654 78999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCC-------------------C--------CccccccCchHHHHHHHcCCCCCCC
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRHRV-------------------L--------PPQLLLKFPKEASFCLWLLHPEPSG 351 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~-------------------~--------p~~~~~~~p~~~~Li~~~L~~dP~~ 351 (720)
|+|++ ||............+.... . ........++..+||.+||+.||.+
T Consensus 193 ~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~ 272 (285)
T cd07861 193 AEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAK 272 (285)
T ss_pred HHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhh
Confidence 99999 5554433222222111000 0 0001112344569999999999999
Q ss_pred CCChHHHHcCccc
Q 004989 352 RPKMGELLQSEFL 364 (720)
Q Consensus 352 Rpta~eiL~hp~~ 364 (720)
|||+.+++.||||
T Consensus 273 Rpt~~~ll~~~~~ 285 (285)
T cd07861 273 RISAKKALNHPYF 285 (285)
T ss_pred CCCHHHHhcCCCC
Confidence 9999999999997
No 136
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=99.97 E-value=5.9e-30 Score=264.65 Aligned_cols=207 Identities=18% Similarity=0.238 Sum_probs=163.3
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+...|..++++++||||+++++ .+... ...|++||| .|++|.+++... ...+++..++.++.||+.||.|||+.
T Consensus 45 ~~~~e~~~l~~l~h~~i~~~~~-~~~~~---~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~ 120 (256)
T cd08529 45 EAIDEARVLAKLDSSYIIRYYE-SFLDK---GKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSK 120 (256)
T ss_pred HHHHHHHHHHhcCCCCeehhee-eeccC---CEEEEEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 3346777899999999999999 44333 267999999 899999999543 45689999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+|+||||+||+++.++.++|+|||.+........
T Consensus 121 ~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~-------------------------------------------- 156 (256)
T cd08529 121 KILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTN-------------------------------------------- 156 (256)
T ss_pred CcccCCCCcceEEEeCCCCEEEcccccceeccCccc--------------------------------------------
Confidence 999999999999999999999999887743211100
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhch
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
......|+++|+|||++.+..++.++|||||||+
T Consensus 157 ----------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i 190 (256)
T cd08529 157 ----------------------------------------------FANTIVGTPYYLSPELCEDKPYNEKSDVWALGVV 190 (256)
T ss_pred ----------------------------------------------hhhccccCccccCHHHhcCCCCCCccchHHHHHH
Confidence 0001357889999999998889999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004989 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
+|+|++ ||...... .....+.....++......+...+++.+||+.+|++||++.++++|||+
T Consensus 191 l~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 256 (256)
T cd08529 191 LYECCTGKHPFDANNQG-ALILKIIRGVFPPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRNPSL 256 (256)
T ss_pred HHHHHhCCCCCCCCCHH-HHHHHHHcCCCCCCccccCHHHHHHHHHHccCCcccCcCHHHHhhCCCC
Confidence 999999 66655433 3333344444443322333455699999999999999999999999996
No 137
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.97 E-value=4.7e-30 Score=266.94 Aligned_cols=208 Identities=17% Similarity=0.204 Sum_probs=162.7
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
...|..++..++||||+++++ .+.++. .+|++||| .+++|.+++.+.. .+++..+..++.||+.||.|||++|+
T Consensus 40 ~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~~i~~~l~~lH~~~~ 114 (262)
T cd05572 40 IFSEKEILEECNHPFIVKLYR-TFKDKK---YIYMLMEYCLGGELWTILRDRG-LFDEYTARFYIACVVLAFEYLHNRGI 114 (262)
T ss_pred HHHHHHHHHhCCCCCEeeeee-eEEcCC---ccEEEEecCCCCcHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHhhCCc
Confidence 346677899999999999999 555443 57999999 8999999995543 48999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+|+||||+||+++.++.++|+|||.+.......
T Consensus 115 ~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~----------------------------------------------- 147 (262)
T cd05572 115 IYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ----------------------------------------------- 147 (262)
T ss_pred ccCCCCHHHEEEcCCCCEEEeeCCcccccCccc-----------------------------------------------
Confidence 999999999999999999999998773321100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......|++.|+|||.+.+..++.++|+|||||++|
T Consensus 148 --------------------------------------------~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~ 183 (262)
T cd05572 148 --------------------------------------------KTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLY 183 (262)
T ss_pred --------------------------------------------ccccccCCcCccChhHhcCCCCCChhhhhhhHHHHH
Confidence 000135788999999998888999999999999999
Q ss_pred hccc---cCCCCc-hHHHHHHHhhcCCCCcccccc-CchHHHHHHHcCCCCCCCCCC-----hHHHHcCcccCCC
Q 004989 303 ELFC---PFSTGE-EKTRTMSSLRHRVLPPQLLLK-FPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEP 367 (720)
Q Consensus 303 eLlt---pf~~~~-~~~~~~~~l~~~~~p~~~~~~-~p~~~~Li~~~L~~dP~~Rpt-----a~eiL~hp~~~~~ 367 (720)
+|++ ||.... .....+..+.........+.. .+...+|+.+||..+|.+||+ +.|+++||||+..
T Consensus 184 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~ 258 (262)
T cd05572 184 ELLTGRPPFGEDDEDPMEIYNDILKGNGKLEFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHKWFNGF 258 (262)
T ss_pred HHHhCCCCcCCCCCCHHHHHHHHhccCCCCCCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhcChhhhCC
Confidence 9999 665544 122333333322222222222 345569999999999999999 9999999999864
No 138
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=99.97 E-value=5.3e-30 Score=267.46 Aligned_cols=211 Identities=18% Similarity=0.201 Sum_probs=159.1
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++++++||||+++++ ++.... ...++++||| .+++|.+++.... .+++..++.++.||+.||.|||++|
T Consensus 50 ~~~~e~~~l~~l~h~~i~~~~~-~~~~~~-~~~~~l~~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~LH~~~ 126 (266)
T cd06651 50 ALECEIQLLKNLQHERIVQYYG-CLRDRA-EKTLTIFMEYMPGGSVKDQLKAYG-ALTESVTRKYTRQILEGMSYLHSNM 126 (266)
T ss_pred HHHHHHHHHHHcCCCCeeeEEE-EEEcCC-CCEEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 4557788999999999999999 443322 2367899999 8899999995543 4899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.++|+|||++........ .+.
T Consensus 127 i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~~-------------------------------~~~----------- 164 (266)
T cd06651 127 IVHRDIKGANILRDSAGNVKLGDFGASKRLQTICM-------------------------------SGT----------- 164 (266)
T ss_pred eeeCCCCHHHEEECCCCCEEEccCCCccccccccc-------------------------------cCC-----------
Confidence 99999999999999999999999888733210000 000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......++..|+|||.+.+..++.++|||||||++
T Consensus 165 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~ 199 (266)
T cd06651 165 ---------------------------------------------GIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTV 199 (266)
T ss_pred ---------------------------------------------ccccCCccccccCHHHhCCCCCCchhhhHHHHHHH
Confidence 00013568899999999888899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccccCchH-HHHHHHcCCCCCCCCCChHHHHcCcccC
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKE-ASFCLWLLHPEPSGRPKMGELLQSEFLN 365 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~-~~Li~~~L~~dP~~Rpta~eiL~hp~~~ 365 (720)
|||++ ||.......... .+......+.+....+.. .+|+ +||..+|++||+++|+++||||+
T Consensus 200 ~el~~g~~pf~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~hp~~~ 265 (266)
T cd06651 200 VEMLTEKPPWAEYEAMAAIF-KIATQPTNPQLPSHISEHARDFL-GCIFVEARHRPSAEELLRHPFAQ 265 (266)
T ss_pred HHHHHCCCCccccchHHHHH-HHhcCCCCCCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhcCcccc
Confidence 99999 565443333332 222222233333333333 4676 67788999999999999999986
No 139
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.97 E-value=9.2e-30 Score=271.06 Aligned_cols=215 Identities=17% Similarity=0.248 Sum_probs=157.5
Q ss_pred hchhhhhhcccCCCCCceecccceeecCC-----CCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEA-----AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAA 137 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~-----~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yL 137 (720)
+..+|..++++++||||+++++ ++.... .....+++|||.+++|.+++......+++.+++.++.||+.||.||
T Consensus 57 ~~~~e~~~l~~l~h~~iv~~~~-~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~l 135 (310)
T cd07865 57 TALREIKILQLLKHENVVNLIE-ICRTKATPYNRYKGSFYLVFEFCEHDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYI 135 (310)
T ss_pred HHHHHHHHHHhCCCCCccceEE-EEecccccccCCCceEEEEEcCCCcCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHH
Confidence 3346788999999999999999 443332 2245799999977899999866555699999999999999999999
Q ss_pred HHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCC
Q 004989 138 HSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 138 Hs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~ 217 (720)
|++||+|+||||+||+++.++.++|+|||.+......... .
T Consensus 136 H~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~--------------------------------~------- 176 (310)
T cd07865 136 HRNKILHRDMKAANILITKDGILKLADFGLARAFSLSKNS--------------------------------K------- 176 (310)
T ss_pred HHCCeeccCCCHHHEEECCCCcEEECcCCCcccccCCccc--------------------------------C-------
Confidence 9999999999999999999999999999887432111000 0
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC-CCccccchh
Q 004989 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYR 296 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwS 296 (720)
+.......++..|+|||.+.+.. ++.++||||
T Consensus 177 -----------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s 209 (310)
T cd07865 177 -----------------------------------------------PNRYTNRVVTLWYRPPELLLGERDYGPPIDMWG 209 (310)
T ss_pred -----------------------------------------------CCCccCcccCccccCcHHhcCCcccCchhhhHH
Confidence 00000135688999999987654 789999999
Q ss_pred hhchhhhccc---cCCCCchHH--HHHHHhhcCCCCcc--------------------------cc--ccCchHHHHHHH
Q 004989 297 LGVLLFELFC---PFSTGEEKT--RTMSSLRHRVLPPQ--------------------------LL--LKFPKEASFCLW 343 (720)
Q Consensus 297 LGvll~eLlt---pf~~~~~~~--~~~~~l~~~~~p~~--------------------------~~--~~~p~~~~Li~~ 343 (720)
|||++|||++ ||....... .....+.....++. +. ...+...+||.+
T Consensus 210 lG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~ 289 (310)
T cd07865 210 AGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDK 289 (310)
T ss_pred HHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHH
Confidence 9999999998 454433221 11111111111000 00 012345589999
Q ss_pred cCCCCCCCCCChHHHHcCccc
Q 004989 344 LLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 344 ~L~~dP~~Rpta~eiL~hp~~ 364 (720)
||..||.+|||++|+|+||||
T Consensus 290 ~l~~~P~~R~t~~e~l~h~~f 310 (310)
T cd07865 290 LLVLDPAKRIDADTALNHDFF 310 (310)
T ss_pred HhcCChhhccCHHHHhcCCCC
Confidence 999999999999999999998
No 140
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=99.97 E-value=6.2e-30 Score=267.28 Aligned_cols=203 Identities=14% Similarity=0.176 Sum_probs=156.8
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
...+|..++.+++||||+++++ ++.... .+++|||| .+++|.+++......+++..++.++.||+.||+|||++|
T Consensus 52 ~~~~e~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~ 127 (266)
T cd05064 52 GFLAEALTLGQFDHSNIVRLEG-VITRGN---TMMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMG 127 (266)
T ss_pred HHHHHHHHHhcCCCCCcCeEEE-EEecCC---CcEEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 4557888999999999999999 444433 57999999 889999999665556999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
++||||||+||+++.++.++++|||.+....... .
T Consensus 128 iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~----------------------------------~----------- 162 (266)
T cd05064 128 YVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEA----------------------------------I----------- 162 (266)
T ss_pred EeeccccHhhEEEcCCCcEEECCCcccccccccc----------------------------------h-----------
Confidence 9999999999999999999999888652210000 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
. ......++..|+|||.+.+..++.++|||||||++
T Consensus 163 -------------------------~-------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l 198 (266)
T cd05064 163 -------------------------Y-------------------TTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVM 198 (266)
T ss_pred -------------------------h-------------------cccCCCCceeecCHHHHhhCCccchhHHHHHHHHH
Confidence 0 00002346789999999888899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||...... .....+.....++. +..+| ...+++..||.++|.+||++.+|++
T Consensus 199 ~ell~~g~~p~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~ 260 (266)
T cd05064 199 WEVMSYGERPYWDMSGQ-DVIKAVEDGFRLPA-PRNCPNLLHQLMLDCWQKERGERPRFSQIHS 260 (266)
T ss_pred HHHhcCCCCCcCcCCHH-HHHHHHHCCCCCCC-CCCCCHHHHHHHHHHcCCCchhCCCHHHHHH
Confidence 99775 66554433 33444444433332 33344 4459999999999999999999975
No 141
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=5e-31 Score=301.39 Aligned_cols=236 Identities=18% Similarity=0.223 Sum_probs=180.1
Q ss_pred ccchhhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHH
Q 004989 58 NDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYA 136 (720)
Q Consensus 58 ~~~~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~y 136 (720)
+..-||+||+ +|...+.++|++++. .|+++. ++|+|||| +||+|..+|.+.+ .+|+.-++.|+..|+.||+-
T Consensus 118 ~tA~F~EERD--imv~~ns~Wiv~Lhy-AFQD~~---~LYlVMdY~pGGDlltLlSk~~-~~pE~~ArFY~aEiVlAlds 190 (1317)
T KOG0612|consen 118 ETACFREERD--IMVFGNSEWIVQLHY-AFQDER---YLYLVMDYMPGGDLLTLLSKFD-RLPEDWARFYTAEIVLALDS 190 (1317)
T ss_pred hHHHHHHHhH--HHHcCCcHHHHHHHH-HhcCcc---ceEEEEecccCchHHHHHhhcC-CChHHHHHHHHHHHHHHHHH
Confidence 4567788888 666778999999998 677775 67999999 9999999997777 69999999999999999999
Q ss_pred HHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCC
Q 004989 137 AHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 216 (720)
Q Consensus 137 LHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~ 216 (720)
||+.|+|||||||+||||+..|++||+|||.|-..+.+ |.+
T Consensus 191 lH~mgyVHRDiKPDNvLld~~GHikLADFGsClkm~~d------------------------------------G~V--- 231 (1317)
T KOG0612|consen 191 LHSMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDAD------------------------------------GTV--- 231 (1317)
T ss_pred HHhccceeccCCcceeEecccCcEeeccchhHHhcCCC------------------------------------CcE---
Confidence 99999999999999999999999999999999443322 111
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC-----CCCCcc
Q 004989 217 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-----APVSCA 291 (720)
Q Consensus 217 ~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-----~~~s~~ 291 (720)
.....+|||.|++||++.. +.|++.
T Consensus 232 --------------------------------------------------~s~~aVGTPDYISPEvLqs~~~~~g~yG~e 261 (1317)
T KOG0612|consen 232 --------------------------------------------------RSSVAVGTPDYISPEVLQSQGDGKGEYGRE 261 (1317)
T ss_pred --------------------------------------------------EeccccCCCCccCHHHHHhhcCCccccCCc
Confidence 1122589999999999952 349999
Q ss_pred ccchhhhchhhhccc---cCCCCchHHHHHHHhh-c---CCCCccccccCchHHHHHHHcCCCCCCCCCC---hHHHHcC
Q 004989 292 SDIYRLGVLLFELFC---PFSTGEEKTRTMSSLR-H---RVLPPQLLLKFPKEASFCLWLLHPEPSGRPK---MGELLQS 361 (720)
Q Consensus 292 sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~-~---~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpt---a~eiL~h 361 (720)
+|+|||||++|||++ ||....-. .++..|. + -.+|+. ....+...+||.++| -+|+.|.. +++|..|
T Consensus 262 cDwWSlGV~~YEMlyG~TPFYadslv-eTY~KIm~hk~~l~FP~~-~~VSeeakdLI~~ll-~~~e~RLgrngiedik~H 338 (1317)
T KOG0612|consen 262 CDWWSLGVFMYEMLYGETPFYADSLV-ETYGKIMNHKESLSFPDE-TDVSEEAKDLIEALL-CDREVRLGRNGIEDIKNH 338 (1317)
T ss_pred cchhhhHHHHHHHHcCCCcchHHHHH-HHHHHHhchhhhcCCCcc-cccCHHHHHHHHHHh-cChhhhcccccHHHHHhC
Confidence 999999999999998 88876544 3333333 3 234522 233344459999988 57888886 9999999
Q ss_pred cccCCCccchHHHHHHHHHhhhhhhHHHHHHH
Q 004989 362 EFLNEPRDSMEEREAAIELREQIDEEELLLEF 393 (720)
Q Consensus 362 p~~~~~~~~l~e~~~~~~~~e~~~~~e~L~~f 393 (720)
|||.+..- -.-++..+|+.+..........|
T Consensus 339 pFF~g~~W-~~iR~~~pP~vPevssd~DTsnF 369 (1317)
T KOG0612|consen 339 PFFEGIDW-DNIRESVPPVVPEVSSDDDTSNF 369 (1317)
T ss_pred ccccCCCh-hhhhhcCCCCCCcCCCCCccccc
Confidence 99998733 22234455555544443344444
No 142
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=99.97 E-value=1.5e-29 Score=268.00 Aligned_cols=211 Identities=17% Similarity=0.210 Sum_probs=160.6
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..+++.++||||+++++ .+..+. .+|++||| .|++|..++.+....+++..++.++.||+.+|.|||++||+
T Consensus 57 ~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~ 132 (292)
T cd06644 57 MVEIEILATCNHPYIVKLLG-AFYWDG---KLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKII 132 (292)
T ss_pred HHHHHHHHhCCCCcEeeeEE-EEEeCC---eEEEEEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCee
Confidence 36777899999999999999 444332 57999999 89999988865555699999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+||+++.++.++|+|||.+.......
T Consensus 133 H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~------------------------------------------------ 164 (292)
T cd06644 133 HRDLKAGNVLLTLDGDIKLADFGVSAKNVKTL------------------------------------------------ 164 (292)
T ss_pred ecCCCcceEEEcCCCCEEEccCccceeccccc------------------------------------------------
Confidence 99999999999999999999998763211000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC-----CCCCccccchhhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-----APVSCASDIYRLG 298 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-----~~~s~~sDIwSLG 298 (720)
.......+++.|+|||.+.+ ..++.++||||||
T Consensus 165 ------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG 202 (292)
T cd06644 165 ------------------------------------------QRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLG 202 (292)
T ss_pred ------------------------------------------cccceecCCccccCceeeccccccCCCCCchhhhHhHH
Confidence 00001357889999999853 3478899999999
Q ss_pred chhhhccc---cCCCCchHHHHHHHhhcCCCCc-cccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCCccc
Q 004989 299 VLLFELFC---PFSTGEEKTRTMSSLRHRVLPP-QLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~~p~-~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
|++|||++ ||...... .....+.....+. .....+ .+..+|+.+||..+|++||++.++++||||......
T Consensus 203 ~il~el~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~~ 278 (292)
T cd06644 203 ITLIEMAQIEPPHHELNPM-RVLLKIAKSEPPTLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEHPFVSSVTSN 278 (292)
T ss_pred HHHHHHhcCCCCCccccHH-HHHHHHhcCCCccCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcCccccccccc
Confidence 99999999 55443332 2233333222221 112223 355699999999999999999999999999876443
No 143
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=99.97 E-value=9.3e-30 Score=267.54 Aligned_cols=209 Identities=20% Similarity=0.254 Sum_probs=161.3
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++++++||||+++++ .+.... .+|++||| .+++|.+++.+....+++..++.++.||+.||.|||++||
T Consensus 49 ~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i 124 (280)
T cd06611 49 FMVEIDILSECKHPNIVGLYE-AYFYEN---KLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKV 124 (280)
T ss_pred HHHHHHHHHhCCCCceeEEEE-EEecCC---eEEEEeeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 346777999999999999999 444433 57999999 8999999996655669999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+|+||||+||+++.++.++|+|||.+.......
T Consensus 125 ~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~----------------------------------------------- 157 (280)
T cd06611 125 IHRDLKAGNILLTLDGDVKLADFGVSAKNKSTL----------------------------------------------- 157 (280)
T ss_pred ccCCCChhhEEECCCCCEEEccCccchhhcccc-----------------------------------------------
Confidence 999999999999999999999988763211000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCccccc-----CCCCCccccchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-----GAPVSCASDIYRL 297 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~-----~~~~s~~sDIwSL 297 (720)
.......|++.|+|||++. ...++.++|||||
T Consensus 158 -------------------------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~sl 194 (280)
T cd06611 158 -------------------------------------------QKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSL 194 (280)
T ss_pred -------------------------------------------cccceeecchhhcCHHHHhhcccCCCCCCccccHHHH
Confidence 0001135789999999985 2347889999999
Q ss_pred hchhhhccc---cCCCCchHHHHHHHhhcCCCCc-cccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 298 GVLLFELFC---PFSTGEEKTRTMSSLRHRVLPP-QLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 298 Gvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~-~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
||++|||++ ||...... ..+..+.....+. .....+ +...+|+.+||+.+|.+||++.++|+||||...
T Consensus 195 G~il~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~ 268 (280)
T cd06611 195 GITLIELAQMEPPHHELNPM-RVLLKILKSEPPTLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHPFVSDQ 268 (280)
T ss_pred HHHHHHHHhCCCCcccCCHH-HHHHHHhcCCCCCcCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcChhhccc
Confidence 999999999 55544333 3333333332221 112223 345599999999999999999999999999886
No 144
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=99.96 E-value=8.8e-30 Score=266.17 Aligned_cols=209 Identities=16% Similarity=0.214 Sum_probs=155.8
Q ss_pred hhhhhhcccC-CCCCceecccceeecCCC--CCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004989 65 HSDGVELTHG-DHLRNQGGLSGVCENEAA--IDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 65 ~~e~~~L~~l-~HpnIV~l~~~~~~~~~~--~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
..|..++.++ +||||+++++.+...... ...+|++||| .+++|.+++.. ....+++..++.++.||+.||+|||+
T Consensus 50 ~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~ 129 (272)
T cd06637 50 KQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQ 129 (272)
T ss_pred HHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 3566677777 799999999944433221 2358999999 88999999954 33458999999999999999999999
Q ss_pred CCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCC
Q 004989 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||+|+||||+||+++.++.++|+|||++...... .+
T Consensus 130 ~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~~~~-----------------------------------~~-------- 166 (272)
T cd06637 130 HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRT-----------------------------------VG-------- 166 (272)
T ss_pred CCCccCCCCHHHEEECCCCCEEEccCCCceecccc-----------------------------------cc--------
Confidence 99999999999999999999999999887322100 00
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC-----CCCCccccc
Q 004989 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-----APVSCASDI 294 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-----~~~s~~sDI 294 (720)
......|++.|+|||++.+ ..++.++||
T Consensus 167 -----------------------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv 199 (272)
T cd06637 167 -----------------------------------------------RRNTFIGTPYWMAPEVIACDENPDATYDFKSDL 199 (272)
T ss_pred -----------------------------------------------cCCcccccccccCHhHhccccCcCCCCCchhhH
Confidence 0011467899999999863 348889999
Q ss_pred hhhhchhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004989 295 YRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 295 wSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
|||||++|||++ ||.............. ...+......++ ...+|+.+||..+|.+|||+.+++.||||
T Consensus 200 ~slGv~l~el~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~~ 272 (272)
T cd06637 200 WSLGITAIEMAEGAPPLCDMHPMRALFLIPR-NPAPRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKHPFI 272 (272)
T ss_pred HHHHHHHHHHHhCCCCccccCHHHHHHHHhc-CCCCCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhCCCC
Confidence 999999999999 5544333322222221 111111222333 44599999999999999999999999997
No 145
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.96 E-value=8.4e-30 Score=265.77 Aligned_cols=204 Identities=18% Similarity=0.250 Sum_probs=156.0
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..++..++||||+++++ .+.... .+|++||| .+++|.+++...+ .+++.+++.++.||+.||.|||++||+
T Consensus 54 ~~e~~~~~~l~h~~ii~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~i~ 128 (267)
T cd06645 54 QQEIIMMKDCKHSNIVAYFG-SYLRRD---KLWICMEFCGGGSLQDIYHVTG-PLSESQIAYVSRETLQGLYYLHSKGKM 128 (267)
T ss_pred HHHHHHHHhCCCCCeeeEEE-EEEeCC---EEEEEEeccCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 46778899999999999999 444432 57999999 8899999985544 499999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
|+||||+||+++.++.++|+|||.+........
T Consensus 129 H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~----------------------------------------------- 161 (267)
T cd06645 129 HRDIKGANILLTDNGHVKLADFGVSAQITATIA----------------------------------------------- 161 (267)
T ss_pred cCCCCHHHEEECCCCCEEECcceeeeEccCccc-----------------------------------------------
Confidence 999999999999999999999988733211000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCccccc---CCCCCccccchhhhch
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA---GAPVSCASDIYRLGVL 300 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~---~~~~s~~sDIwSLGvl 300 (720)
......|++.|+|||.+. ...++.++|||||||+
T Consensus 162 -------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~i 198 (267)
T cd06645 162 -------------------------------------------KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGIT 198 (267)
T ss_pred -------------------------------------------ccccccCcccccChhhhccccCCCCCchhhhHHHHHH
Confidence 000136789999999984 4448899999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCccccc--cCc-hHHHHHHHcCCCCCCCCCChHHHHcCcc
Q 004989 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL--KFP-KEASFCLWLLHPEPSGRPKMGELLQSEF 363 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~--~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~ 363 (720)
+|+|++ ||..................++.+.. .++ ...+|+.+||..+|++||++.++++|||
T Consensus 199 l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~~~ 267 (267)
T cd06645 199 AIELAELQPPMFDLHPMRALFLMTKSNFQPPKLKDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQHPF 267 (267)
T ss_pred HHHHhcCCCCcccccchhhHHhhhccCCCCCcccccCCCCHHHHHHHHHHccCCchhCcCHHHHhcCCC
Confidence 999999 55443332222222222222222221 233 4459999999999999999999999998
No 146
>PHA03210 serine/threonine kinase US3; Provisional
Probab=99.96 E-value=5.5e-30 Score=291.84 Aligned_cols=211 Identities=15% Similarity=0.135 Sum_probs=155.7
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCC----CCCCCHHHHHHHHHHHHHHHHHHHH
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP----KRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~----~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
.++|..+|.+++|||||++++ ++.... ..|+++|+.+++|.+++... .......+++.|+.||+.||.|||+
T Consensus 210 ~~~Ei~il~~l~HpnIv~l~~-~~~~~~---~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~ 285 (501)
T PHA03210 210 LENEILALGRLNHENILKIEE-ILRSEA---NTYMITQKYDFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHD 285 (501)
T ss_pred HHHHHHHHHhCCCCCcCcEeE-EEEECC---eeEEEEeccccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHh
Confidence 347888999999999999999 555544 46899999778899888332 1223467788999999999999999
Q ss_pred CCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCC
Q 004989 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+|||||||||+|||++.++.+||+|||++..+......
T Consensus 286 ~gIiHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~------------------------------------------ 323 (501)
T PHA03210 286 KKLIHRDIKLENIFLNCDGKIVLGDFGTAMPFEKEREA------------------------------------------ 323 (501)
T ss_pred CCeecCCCCHHHEEECCCCCEEEEeCCCceecCccccc------------------------------------------
Confidence 99999999999999999999999999988443211000
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhc
Q 004989 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
.....+||+.|+|||++.+..++.++|||||||
T Consensus 324 -----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGv 356 (501)
T PHA03210 324 -----------------------------------------------FDYGWVGTVATNSPEILAGDGYCEITDIWSCGL 356 (501)
T ss_pred -----------------------------------------------ccccccCCcCCCCchhhcCCCCCcHHHHHHHHH
Confidence 001147899999999999988999999999999
Q ss_pred hhhhccc----cCCCC--chHHHHHHHhhc-----CCCCc-----------------------ccc--ccCchHHHHHHH
Q 004989 300 LLFELFC----PFSTG--EEKTRTMSSLRH-----RVLPP-----------------------QLL--LKFPKEASFCLW 343 (720)
Q Consensus 300 ll~eLlt----pf~~~--~~~~~~~~~l~~-----~~~p~-----------------------~~~--~~~p~~~~Li~~ 343 (720)
++|||++ ||... .........+.. ..+|. .+. ...++..++|.+
T Consensus 357 il~ell~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~k 436 (501)
T PHA03210 357 ILLDMLSHDFCPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVK 436 (501)
T ss_pred HHHHHHHCCCCCccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHH
Confidence 9999998 33221 111122221111 00110 000 011233478999
Q ss_pred cCCCCCCCCCChHHHHcCcccCCC
Q 004989 344 LLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 344 ~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
||++||.+|||+.|+|+||||...
T Consensus 437 mL~~DP~~Rpsa~elL~hp~f~~~ 460 (501)
T PHA03210 437 MLTFDWHLRPGAAELLALPLFSAE 460 (501)
T ss_pred HhccCcccCcCHHHHhhChhhhcC
Confidence 999999999999999999999875
No 147
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.96 E-value=1.6e-29 Score=265.52 Aligned_cols=205 Identities=18% Similarity=0.272 Sum_probs=152.3
Q ss_pred hhhhhhcccCC-CCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 65 HSDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~L~~l~-HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..++.++. ||||+++++ ++.+... ..++++|||.+++|.+++......+++.+++.++.||+.||.|||+.||+
T Consensus 45 ~~e~~~l~~l~~h~~i~~~~~-~~~~~~~-~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~ 122 (282)
T cd07831 45 LREIQALRRLSPHPNILRLIE-VLFDRKT-GRLALVFELMDMNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIF 122 (282)
T ss_pred HHHHHHHhhcCCCCCccceEE-EEecCCC-CcEEEEEecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCce
Confidence 35666777775 999999999 4544422 25799999966799999865445689999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+||+++. +.++|+|||.+....... .+
T Consensus 123 H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~---------------------------------~~------------- 155 (282)
T cd07831 123 HRDIKPENILIKD-DILKLADFGSCRGIYSKP---------------------------------PY------------- 155 (282)
T ss_pred ecccCHHHEEEcC-CCeEEEecccccccccCC---------------------------------Cc-------------
Confidence 9999999999999 999999998874321100 00
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC-CCCCccccchhhhchhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLF 302 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sDIwSLGvll~ 302 (720)
....+++.|+|||++.. ..++.++|||||||++|
T Consensus 156 ---------------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~ 190 (282)
T cd07831 156 ---------------------------------------------TEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFF 190 (282)
T ss_pred ---------------------------------------------CCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHH
Confidence 01356889999998755 44789999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhc--------------------CCCCcc--------ccccCchHHHHHHHcCCCCCCC
Q 004989 303 ELFC---PFSTGEEKTRTMSSLRH--------------------RVLPPQ--------LLLKFPKEASFCLWLLHPEPSG 351 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~--------------------~~~p~~--------~~~~~p~~~~Li~~~L~~dP~~ 351 (720)
||++ ||...+.... ...+.. ...++. .........+||.+||.++|++
T Consensus 191 el~~~~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~ 269 (282)
T cd07831 191 EILSLFPLFPGTNELDQ-IAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDE 269 (282)
T ss_pred HHHcCCcCCCCCCHHHH-HHHHHHHcCCCCHHHHHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCccc
Confidence 9998 5654433211 111110 001110 0111234459999999999999
Q ss_pred CCChHHHHcCccc
Q 004989 352 RPKMGELLQSEFL 364 (720)
Q Consensus 352 Rpta~eiL~hp~~ 364 (720)
||++.++++||||
T Consensus 270 R~~~~~~l~~~~~ 282 (282)
T cd07831 270 RITAKQALRHPYF 282 (282)
T ss_pred ccCHHHHhhCCCC
Confidence 9999999999997
No 148
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=99.96 E-value=8.6e-30 Score=269.18 Aligned_cols=207 Identities=18% Similarity=0.252 Sum_probs=160.3
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
.+|..+|.+++|+||+.+++ .+..+. .+|++||| .+++|.+++.. ....+++..+..++.||+.||.|||+.||
T Consensus 48 ~~E~~il~~l~~~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i 123 (285)
T cd05632 48 LNEKQILEKVNSQFVVNLAY-AYETKD---ALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENT 123 (285)
T ss_pred HHHHHHHHHcCCcCceeEEE-EEecCC---EEEEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 46778999999999999988 444433 57999999 88999998843 33459999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.++|+|||++.......
T Consensus 124 iH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~----------------------------------------------- 156 (285)
T cd05632 124 VYRDLKPENILLDDYGHIRISDLGLAVKIPEGE----------------------------------------------- 156 (285)
T ss_pred eecCCCHHHEEECCCCCEEEecCCcceecCCCC-----------------------------------------------
Confidence 999999999999999999999998763210000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......|++.|+|||.+.+..++.++|||||||++|
T Consensus 157 --------------------------------------------~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~ 192 (285)
T cd05632 157 --------------------------------------------SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIY 192 (285)
T ss_pred --------------------------------------------cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHH
Confidence 000136799999999998888999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCC--CccccccC-chHHHHHHHcCCCCCCCCCC-----hHHHHcCcccCCC
Q 004989 303 ELFC---PFSTGEEKTRTMSSLRHRVL--PPQLLLKF-PKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEP 367 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~~--p~~~~~~~-p~~~~Li~~~L~~dP~~Rpt-----a~eiL~hp~~~~~ 367 (720)
||++ ||........ ...+..... ...+.... +...+|+.+||..||++||+ +.+++.|+||...
T Consensus 193 ~l~~g~~P~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~ 267 (285)
T cd05632 193 EMIEGQSPFRGRKEKVK-REEVDRRVLETEEVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFFRNM 267 (285)
T ss_pred HHHhCCCCCCCCCHHHH-HHHHHHhhhccccccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcChhhhcC
Confidence 9999 6655433211 111111111 11222233 34569999999999999999 8899999999987
No 149
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=99.96 E-value=4.9e-30 Score=277.41 Aligned_cols=224 Identities=17% Similarity=0.205 Sum_probs=163.1
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
+..+|..+|.+++||||+++++.+.........+|++|||.+++|.+++.... .+++..++.++.||+.||.|||++||
T Consensus 50 ~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~i 128 (334)
T cd07855 50 RTLRELKILRHFKHDNIIAIRDILRPPGADFKDVYVVMDLMESDLHHIIHSDQ-PLTEEHIRYFLYQLLRGLKYIHSANV 128 (334)
T ss_pred HHHHHHHHHHhcCCCCccCHHHhccccCCCCceEEEEEehhhhhHHHHhccCC-CCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 34467889999999999999994433333445689999996679999995443 49999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.+||+|||.+......... .
T Consensus 129 vH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~-------------------------------~------------- 164 (334)
T cd07855 129 IHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTE-------------------------------H------------- 164 (334)
T ss_pred ecCCCCHHHEEEcCCCcEEecccccceeecccCcC-------------------------------C-------------
Confidence 99999999999999999999999887432111000 0
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC-CCCCccccchhhhchh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLL 301 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sDIwSLGvll 301 (720)
.......+|+.+|+|||.+.+ ..++.++|||||||++
T Consensus 165 ------------------------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l 202 (334)
T cd07855 165 ------------------------------------------KYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIF 202 (334)
T ss_pred ------------------------------------------CcccccccccccccChHHhcCCcccccccchHHHHHHH
Confidence 000011467899999999866 3489999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhc-CC--------------------CC---c----cc-cccCchHHHHHHHcCCCCC
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRH-RV--------------------LP---P----QL-LLKFPKEASFCLWLLHPEP 349 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~-~~--------------------~p---~----~~-~~~~p~~~~Li~~~L~~dP 349 (720)
|||++ ||............... +. ++ + .+ ....+...+||.+||+.+|
T Consensus 203 ~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P 282 (334)
T cd07855 203 AEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDP 282 (334)
T ss_pred HHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCCh
Confidence 99998 56543322111000000 00 00 0 00 1123445599999999999
Q ss_pred CCCCChHHHHcCcccCCCccchHH
Q 004989 350 SGRPKMGELLQSEFLNEPRDSMEE 373 (720)
Q Consensus 350 ~~Rpta~eiL~hp~~~~~~~~l~e 373 (720)
.+||++.++++||||.+...+..+
T Consensus 283 ~~Rpt~~~~l~~~~~~~~~~~~~~ 306 (334)
T cd07855 283 EERITVEQALQHPFLAQYHDPDDE 306 (334)
T ss_pred hhCcCHHHHHhChhhhhccCCccc
Confidence 999999999999999887554443
No 150
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=99.96 E-value=1.2e-29 Score=263.12 Aligned_cols=209 Identities=20% Similarity=0.294 Sum_probs=163.4
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~---~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
+...|..+++.++||||+++++.+. ... ...+|++||| .+++|.+++.. ....+++..++.++.||+.||.|||
T Consensus 45 ~~~~e~~~l~~l~~~~i~~~~~~~~-~~~-~~~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH 122 (265)
T cd08217 45 QLVSEVNILRELKHPNIVRYYDRII-DRS-NQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECH 122 (265)
T ss_pred HHHHHHHHHHhcCCCccceeeeeee-cCC-CCEEEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHh
Confidence 4446788999999999999998333 222 2357999999 89999999943 2456899999999999999999999
Q ss_pred -----HCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccc
Q 004989 139 -----SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLV 213 (720)
Q Consensus 139 -----s~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla 213 (720)
+.+|+|+||||+||+++.++.++|+|||.+....... .+
T Consensus 123 ~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~~~~~---------------------------------~~--- 166 (265)
T cd08217 123 NRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHDS---------------------------------SF--- 166 (265)
T ss_pred cCccccCcceecCCCHHHEEEecCCCEEEecccccccccCCc---------------------------------cc---
Confidence 9999999999999999999999999998874332110 00
Q ss_pred cCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCcccc
Q 004989 214 TAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASD 293 (720)
Q Consensus 214 ~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sD 293 (720)
.....|++.|+|||.+.+..++.++|
T Consensus 167 ------------------------------------------------------~~~~~~~~~~~~pE~~~~~~~~~~~D 192 (265)
T cd08217 167 ------------------------------------------------------AKTYVGTPYYMSPEQLNHMSYDEKSD 192 (265)
T ss_pred ------------------------------------------------------ccccccCCCccChhhhcCCCCCchhH
Confidence 00135788999999998888999999
Q ss_pred chhhhchhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004989 294 IYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 294 IwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
+||||+++|+|++ ||.... .......+..+..++......+...+|+.+||..+|.+||++.+|++|||+
T Consensus 193 v~slG~il~~l~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~~~~ 265 (265)
T cd08217 193 IWSLGCLIYELCALSPPFTARN-QLQLASKIKEGKFRRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQLPLI 265 (265)
T ss_pred HHHHHHHHHHHHHCCCcccCcC-HHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCCcccCCCHHHHhhCCCC
Confidence 9999999999999 555543 234444455444433222233455599999999999999999999999996
No 151
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=99.96 E-value=1.4e-29 Score=266.66 Aligned_cols=208 Identities=18% Similarity=0.243 Sum_probs=156.9
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+...|..++++++||||+++++ ++.+.. ..+++|||..++|.+++.. ....+++..++.++.||+.||+|||+.|
T Consensus 45 ~~~~E~~~l~~l~h~~i~~~~~-~~~~~~---~~~~v~e~~~~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~ 120 (284)
T cd07860 45 TAIREISLLKELNHPNIVKLLD-VIHTEN---KLYLVFEFLHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHR 120 (284)
T ss_pred HHHHHHHHHHhcCCCCCcchhh-hcccCC---cEEEEeeccccCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3446788999999999999999 444433 5799999966789999843 3455899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
++|+||+|+||+++.++.++|+|||.+...+....
T Consensus 121 i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~--------------------------------------------- 155 (284)
T cd07860 121 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--------------------------------------------- 155 (284)
T ss_pred eecCCCCHHHEEECCCCCEEEeeccchhhcccCcc---------------------------------------------
Confidence 99999999999999999999999988743221100
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC-CCccccchhhhch
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVL 300 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGvl 300 (720)
......+++.|+|||.+.+.. ++.++|||||||+
T Consensus 156 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~i 190 (284)
T cd07860 156 ---------------------------------------------TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCI 190 (284)
T ss_pred ---------------------------------------------ccccccccccccCCeEEecCCCCCcHHHHHHHHHH
Confidence 000124688999999987755 6889999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCc--------------------------c-ccccCchHHHHHHHcCCCCCC
Q 004989 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPP--------------------------Q-LLLKFPKEASFCLWLLHPEPS 350 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~--------------------------~-~~~~~p~~~~Li~~~L~~dP~ 350 (720)
+|||++ ||............+.....++ . .....+...+||.+||+.||.
T Consensus 191 l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~ 270 (284)
T cd07860 191 FAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPN 270 (284)
T ss_pred HHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcc
Confidence 999999 5655443322222221110000 0 011223445899999999999
Q ss_pred CCCChHHHHcCccc
Q 004989 351 GRPKMGELLQSEFL 364 (720)
Q Consensus 351 ~Rpta~eiL~hp~~ 364 (720)
+|||+++++.||||
T Consensus 271 ~Rpt~~~~l~~~~f 284 (284)
T cd07860 271 KRISAKAALAHPFF 284 (284)
T ss_pred cCCCHHHHhcCCCC
Confidence 99999999999998
No 152
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=99.96 E-value=7.1e-30 Score=275.07 Aligned_cols=205 Identities=18% Similarity=0.235 Sum_probs=156.5
Q ss_pred hhhhhcccCC-CCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 66 SDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~L~~l~-HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.|..++..+. ||+|+++++ ++.... .+|+|||| .|++|.+++...+ .+++.+++.++.||+.||.|||++||+
T Consensus 49 ~e~~~l~~~~~~~~i~~~~~-~~~~~~---~~~lv~Ey~~~g~L~~~i~~~~-~l~~~~~~~i~~qi~~al~~lH~~~iv 123 (323)
T cd05615 49 VEKRVLALQDKPPFLTQLHS-CFQTVD---RLYFVMEYVNGGDLMYHIQQVG-KFKEPQAVFYAAEISVGLFFLHRRGII 123 (323)
T ss_pred HHHHHHHhccCCCchhheee-EEecCC---EEEEEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 4555666665 566777887 555543 58999999 8999999995544 499999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.++|+|||++........
T Consensus 124 HrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~~----------------------------------------------- 156 (323)
T cd05615 124 YRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGV----------------------------------------------- 156 (323)
T ss_pred ccCCCHHHeEECCCCCEEEeccccccccCCCCc-----------------------------------------------
Confidence 999999999999999999999988732110000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......||+.|+|||++.+..++.++|||||||++||
T Consensus 157 -------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~e 193 (323)
T cd05615 157 -------------------------------------------TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYE 193 (323)
T ss_pred -------------------------------------------cccCccCCccccCHHHHcCCCCCCccchhhhHHHHHH
Confidence 0001368999999999998889999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCC-----hHHHHcCcccCCC
Q 004989 304 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpt-----a~eiL~hp~~~~~ 367 (720)
|++ ||...... .....+...... ......+...+|+.+||+.+|.+|++ ..++++||||...
T Consensus 194 lltG~~pf~~~~~~-~~~~~i~~~~~~-~p~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~f~~~ 263 (323)
T cd05615 194 MLAGQPPFDGEDED-ELFQSIMEHNVS-YPKSLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREHAFFRRI 263 (323)
T ss_pred HHhCCCCCCCCCHH-HHHHHHHhCCCC-CCccCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcCcccCCC
Confidence 999 66655443 233333322211 11122345569999999999999997 4789999999875
No 153
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.96 E-value=1e-29 Score=277.15 Aligned_cols=212 Identities=19% Similarity=0.212 Sum_probs=157.6
Q ss_pred hchhhhhhcccCCCCCceecccceeecCC---CCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEA---AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~---~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
+..+|..++..++||||+++++ ++.... .....|+||||.+++|.+++... +++..+..++.||+.||.|||+
T Consensus 61 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~---l~~~~~~~~~~ql~~aL~~LH~ 136 (353)
T cd07850 61 RAYRELVLMKLVNHKNIIGLLN-VFTPQKSLEEFQDVYLVMELMDANLCQVIQMD---LDHERMSYLLYQMLCGIKHLHS 136 (353)
T ss_pred HHHHHHHHHHhcCCCCCcceee-eeccCCCccccCcEEEEEeccCCCHHHHHhhc---CCHHHHHHHHHHHHHHHHHHHh
Confidence 3346788999999999999999 443322 22357999999777999988432 8999999999999999999999
Q ss_pred CCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCC
Q 004989 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||+||||||+||+++.++.++|+|||.+...+...
T Consensus 137 ~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~-------------------------------------------- 172 (353)
T cd07850 137 AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-------------------------------------------- 172 (353)
T ss_pred CCeeeCCCCHHHEEECCCCCEEEccCccceeCCCCC--------------------------------------------
Confidence 999999999999999999999999998873321110
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhc
Q 004989 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
......+++.|+|||.+.+..++.++|||||||
T Consensus 173 -----------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~ 205 (353)
T cd07850 173 -----------------------------------------------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 205 (353)
T ss_pred -----------------------------------------------CCCCCcccccccCHHHHhCCCCCCchhhHhHHH
Confidence 000135688999999999988999999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcCCC--------------------------------Cccc--------cccCc-
Q 004989 300 LLFELFC---PFSTGEEKTRTMSSLRHRVL--------------------------------PPQL--------LLKFP- 335 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~~~~--------------------------------p~~~--------~~~~p- 335 (720)
++|+|++ ||...+........+..... +... ....+
T Consensus 206 ~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (353)
T cd07850 206 IMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKAS 285 (353)
T ss_pred HHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchh
Confidence 9999999 56544322111111100000 0000 00112
Q ss_pred hHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004989 336 KEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 336 ~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
...+||.+||++||++|||+.|+|+||||.....
T Consensus 286 ~~~~li~~~L~~dP~~R~t~~eiL~~~~~~~~~~ 319 (353)
T cd07850 286 QARDLLSKMLVIDPEKRISVDDALQHPYINVWYD 319 (353)
T ss_pred HHHHHHHHHcCCChhhCcCHHHHhcChhHhhccC
Confidence 2459999999999999999999999999875433
No 154
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=99.96 E-value=1.1e-29 Score=262.48 Aligned_cols=205 Identities=16% Similarity=0.196 Sum_probs=158.4
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..+++.++||||+++++ .+... ..+|+++|| .+++|.+++......+++..++.++.||+.||.|||+.||+
T Consensus 46 ~~e~~~~~~l~~~~i~~~~~-~~~~~---~~~~l~~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~ 121 (256)
T cd06612 46 IKEISILKQCDSPYIVKYYG-SYFKN---TDLWIVMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKI 121 (256)
T ss_pred HHHHHHHHhCCCCcEeeeee-eeecC---CcEEEEEecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 36667889999999999999 44444 368999999 88999999966566799999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
|+||+|+||+++.++.++|+|||.+........
T Consensus 122 H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~----------------------------------------------- 154 (256)
T cd06612 122 HRDIKAGNILLNEEGQAKLADFGVSGQLTDTMA----------------------------------------------- 154 (256)
T ss_pred cCCCCcceEEECCCCcEEEcccccchhcccCcc-----------------------------------------------
Confidence 999999999999999999999888733211000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......|+..|+|||.+.+..++.++|||||||++|+
T Consensus 155 -------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~ 191 (256)
T cd06612 155 -------------------------------------------KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIE 191 (256)
T ss_pred -------------------------------------------ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHH
Confidence 0001356888999999988889999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCCCc-cccccC-chHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004989 304 LFC---PFSTGEEKTRTMSSLRHRVLPP-QLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~~p~-~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
|++ ||......... ..+.....+. .....+ +...+|+.+||+.+|.+|||+.|+|+||||
T Consensus 192 l~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~~~~ 256 (256)
T cd06612 192 MAEGKPPYSDIHPMRAI-FMIPNKPPPTLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQHPFI 256 (256)
T ss_pred HHhCCCCCCCcchhhhh-hhhccCCCCCCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhcCCCC
Confidence 999 55443332222 1221111111 111122 345699999999999999999999999997
No 155
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=99.96 E-value=1.4e-29 Score=266.44 Aligned_cols=207 Identities=18% Similarity=0.182 Sum_probs=158.4
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..|..+|.+++||||+++++ .+.... ..+++||| .+++|..+. .+++..+..++.||+.||.|||+.||+
T Consensus 47 ~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~i~ 117 (279)
T cd06619 47 MSELEILYKCDSPYIIGFYG-AFFVEN---RISICTEFMDGGSLDVYR-----KIPEHVLGRIAVAVVKGLTYLWSLKIL 117 (279)
T ss_pred HHHHHHHHhCCCCCeeeEEE-EEEECC---EEEEEEecCCCCChHHhh-----cCCHHHHHHHHHHHHHHHHHHHHCCEe
Confidence 36777899999999999999 554443 57899999 888887643 378999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
|+||||+||+++.++.++|+|||++......
T Consensus 118 H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~------------------------------------------------- 148 (279)
T cd06619 118 HRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS------------------------------------------------- 148 (279)
T ss_pred eCCCCHHHEEECCCCCEEEeeCCcceecccc-------------------------------------------------
Confidence 9999999999999999999999887322100
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......||+.|+|||.+.+..++.++|||||||++|+
T Consensus 149 -------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~ 185 (279)
T cd06619 149 -------------------------------------------IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFME 185 (279)
T ss_pred -------------------------------------------cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHH
Confidence 0001367899999999998889999999999999999
Q ss_pred ccc---cCCCCch------HHHHHHHhhcCCCCccccc-cCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCccchH
Q 004989 304 LFC---PFSTGEE------KTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSME 372 (720)
Q Consensus 304 Llt---pf~~~~~------~~~~~~~l~~~~~p~~~~~-~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~l~ 372 (720)
|++ ||..... .......+.....+..... ..+...+|+.+||+.+|.+||+++|+++||||........
T Consensus 186 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~~~~~~~~~~~ 264 (279)
T cd06619 186 LALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSEKFVHFITQCMRKQPKERPAPENLMDHPFIVQYNDGNA 264 (279)
T ss_pred HHhCCCCchhhcccccccchHHHHHHHhccCCCCCCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcCcccccccCccH
Confidence 999 5543211 1112222222222221112 2345669999999999999999999999999988744433
No 156
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=99.96 E-value=2.3e-30 Score=271.28 Aligned_cols=208 Identities=20% Similarity=0.258 Sum_probs=166.4
Q ss_pred hhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.|..||..++.|.||.+-. .|++.+ .+|+||.. .||+|.-+|.+ .++.+++..++.|+.+|+.||.+||..+||
T Consensus 234 nEk~iL~kV~s~FiVslaY-AfeTkd---~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iV 309 (591)
T KOG0986|consen 234 NEKQILEKVSSPFIVSLAY-AFETKD---ALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIV 309 (591)
T ss_pred HHHHHHHHhccCcEEEEee-eecCCC---ceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhccee
Confidence 6788999999999999987 666665 56999999 99999988844 345699999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
.|||||+|||+|+.|+|+|.|+|+|.++....
T Consensus 310 YRDLKPeNILLDd~GhvRISDLGLAvei~~g~------------------------------------------------ 341 (591)
T KOG0986|consen 310 YRDLKPENILLDDHGHVRISDLGLAVEIPEGK------------------------------------------------ 341 (591)
T ss_pred eccCChhheeeccCCCeEeeccceEEecCCCC------------------------------------------------
Confidence 99999999999999999999999985431110
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
|. ...+||.+|||||++.+..|+++.|+|||||+|||
T Consensus 342 -----------------------------------------~~--~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYe 378 (591)
T KOG0986|consen 342 -----------------------------------------PI--RGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYE 378 (591)
T ss_pred -----------------------------------------cc--ccccCcccccCHHHHcCCcccCCccHHHHHhHHHH
Confidence 00 11489999999999999999999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCC--CCccccccCchHH-HHHHHcCCCCCCCCC-----ChHHHHcCcccCCCcc
Q 004989 304 LFC---PFSTGEEKTRTMSSLRHRV--LPPQLLLKFPKEA-SFCLWLLHPEPSGRP-----KMGELLQSEFLNEPRD 369 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~--~p~~~~~~~p~~~-~Li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~~~ 369 (720)
|+. ||....+.. -...+.+++ -+..+....++++ +||..+|+.||++|. .+.++.+||||+...-
T Consensus 379 mi~G~sPFr~~KeKv-k~eEvdrr~~~~~~ey~~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~lnw 454 (591)
T KOG0986|consen 379 MIAGHSPFRQRKEKV-KREEVDRRTLEDPEEYSDKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEHPFFKDLNW 454 (591)
T ss_pred HHcccCchhhhhhhh-hHHHHHHHHhcchhhcccccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhCcccccCCH
Confidence 998 665443321 111222222 2334445555555 999999999999996 6889999999998733
No 157
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.96 E-value=6.3e-29 Score=266.38 Aligned_cols=207 Identities=17% Similarity=0.202 Sum_probs=162.0
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
+...|..++..++||||+++++ ++.+.. ..|++|||..++|.+++......+++.+++.++.||+.||.|||++||
T Consensus 67 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi 142 (313)
T cd06633 67 DIIKEVKFLQQLKHPNTIEYKG-CYLKEH---TAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNM 142 (313)
T ss_pred HHHHHHHHHHhCCCCCCccEEE-EEEeCC---EEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 3446788999999999999999 555443 579999996678988886655669999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+|+||+|+||+++.++.++|+|||.+......
T Consensus 143 ~H~dl~p~nili~~~~~~kL~dfg~~~~~~~~------------------------------------------------ 174 (313)
T cd06633 143 IHRDIKAGNILLTEPGQVKLADFGSASKSSPA------------------------------------------------ 174 (313)
T ss_pred ecCCCChhhEEECCCCCEEEeecCCCcccCCC------------------------------------------------
Confidence 99999999999999999999998876211000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCccccc---CCCCCccccchhhhc
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA---GAPVSCASDIYRLGV 299 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~---~~~~s~~sDIwSLGv 299 (720)
....|+..|+|||++. ...++.++|||||||
T Consensus 175 ----------------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGv 208 (313)
T cd06633 175 ----------------------------------------------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGI 208 (313)
T ss_pred ----------------------------------------------CCccccccccChhhccccCCCCCCchhhHHHHHH
Confidence 0135788999999984 345889999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004989 300 LLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
++|+|++ ||.......... .+.....+......++ ...+|+.+||+++|.+||++.+++.||||....
T Consensus 209 il~el~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~~~~~~~~ 280 (313)
T cd06633 209 TCIELAERKPPLFNMNAMSALY-HIAQNDSPTLQSNEWTDSFRGFVDYCLQKIPQERPASAELLRHDFVRRDR 280 (313)
T ss_pred HHHHHHhCCCCCCCCChHHHHH-HHHhcCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCcccCCCc
Confidence 9999998 555544333332 2332333333333344 356999999999999999999999999999753
No 158
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=99.96 E-value=1.2e-29 Score=271.22 Aligned_cols=206 Identities=19% Similarity=0.200 Sum_probs=157.5
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CC
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-QG 141 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs-~g 141 (720)
..+|..++.+++||||+++++ .+..+. .+|++||| .|++|.+++.+. ..+++..+..++.||+.||.|||+ .+
T Consensus 46 ~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~ey~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~~ 120 (308)
T cd06615 46 IIRELKVLHECNSPYIVGFYG-AFYSDG---EISICMEHMDGGSLDQVLKKA-GRIPENILGKISIAVLRGLTYLREKHK 120 (308)
T ss_pred HHHHHHHHHhCCCCCCCeEEE-EEeeCC---EEEEEeeccCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhhCC
Confidence 347888999999999999999 554443 67999999 899999999654 448999999999999999999997 69
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
++|+||||+|||++.++.++|+|||.+......
T Consensus 121 i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~----------------------------------------------- 153 (308)
T cd06615 121 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----------------------------------------------- 153 (308)
T ss_pred EEECCCChHHEEEecCCcEEEccCCCccccccc-----------------------------------------------
Confidence 999999999999999999999988876221000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......|++.|+|||.+.+..++.++|||||||++
T Consensus 154 ---------------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l 188 (308)
T cd06615 154 ---------------------------------------------MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSL 188 (308)
T ss_pred ---------------------------------------------ccccCCCCcCccChhHhcCCCCCccchHHHHHHHH
Confidence 00013678999999999888899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcC-----------------------------------CCCccccc--cCchHHHHH
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRHR-----------------------------------VLPPQLLL--KFPKEASFC 341 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~-----------------------------------~~p~~~~~--~~p~~~~Li 341 (720)
|+|++ ||...... .....+... ..++..+. ..+...+|+
T Consensus 189 ~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 267 (308)
T cd06615 189 VEMAIGRYPIPPPDAK-ELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFV 267 (308)
T ss_pred HHHHhCCCCCCCcchh-hHHHhhcCccccccccCCcccccCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHH
Confidence 99999 55433211 111111100 00111110 123456999
Q ss_pred HHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 342 LWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 342 ~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
.+||..+|++|||+.++++||||...
T Consensus 268 ~~~l~~~P~~Rpt~~~ll~~~~~~~~ 293 (308)
T cd06615 268 DKCLKKNPKERADLKELTKHPFIKRA 293 (308)
T ss_pred HHHccCChhhCcCHHHHhcChhhhhc
Confidence 99999999999999999999999764
No 159
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.96 E-value=2.8e-30 Score=260.06 Aligned_cols=220 Identities=16% Similarity=0.212 Sum_probs=165.1
Q ss_pred chhhchhhhhhccc-CCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHH
Q 004989 60 FELRKHSDGVELTH-GDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAA 137 (720)
Q Consensus 60 ~~~r~~~e~~~L~~-l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yL 137 (720)
++-|..||..++.+ -.|+||++|++ ||+++. .||+|||- .||+|...|.+.. .+++.++..+++.|+.||+||
T Consensus 118 sR~RvfREVe~f~~Cqgh~nilqLie-fFEdd~---~FYLVfEKm~GGplLshI~~~~-~F~E~EAs~vvkdia~aLdFl 192 (463)
T KOG0607|consen 118 SRSRVFREVETFYQCQGHKNILQLIE-FFEDDT---RFYLVFEKMRGGPLLSHIQKRK-HFNEREASRVVKDIASALDFL 192 (463)
T ss_pred HHHHHHHHHHHHHHhcCCccHHHHHH-Hhcccc---eEEEEEecccCchHHHHHHHhh-hccHHHHHHHHHHHHHHHHHH
Confidence 33355577778777 56999999999 887775 68999999 9999999995544 399999999999999999999
Q ss_pred HHCCceeccCCCCcEEEccCCc---eEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhccccccccccc
Q 004989 138 HSQGIVVHNVRPSCFVMSSFNH---VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVT 214 (720)
Q Consensus 138 Hs~gIvHrDLKP~NILl~~~~~---vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~ 214 (720)
|.+||.||||||+|||-...++ ||||||.+.+..... .|..++.
T Consensus 193 H~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~---------------------------------~~~spas 239 (463)
T KOG0607|consen 193 HTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLN---------------------------------NDCSPAS 239 (463)
T ss_pred hhcCcccccCCccceeecCCCCcCceeeeccccccccccC---------------------------------CCCCCCC
Confidence 9999999999999999986654 788888765321000 1111110
Q ss_pred CCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCccccc---CC--CCC
Q 004989 215 APTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA---GA--PVS 289 (720)
Q Consensus 215 ~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~---~~--~~s 289 (720)
+ ......+|+..|||||+.. +. .|+
T Consensus 240 t--------------------------------------------------P~L~tPvGSAEfMAPEVVd~fv~qA~~YD 269 (463)
T KOG0607|consen 240 T--------------------------------------------------PELLTPVGSAEFMAPEVVDVFVDQATFYD 269 (463)
T ss_pred C--------------------------------------------------ccccCcccchhhcchhHHhhhcccccccc
Confidence 0 0112358999999999863 22 289
Q ss_pred ccccchhhhchhhhccccCCCCc------------h-----HHHHHHHhhcC--CCCccccccCchHH-HHHHHcCCCCC
Q 004989 290 CASDIYRLGVLLFELFCPFSTGE------------E-----KTRTMSSLRHR--VLPPQLLLKFPKEA-SFCLWLLHPEP 349 (720)
Q Consensus 290 ~~sDIwSLGvll~eLltpf~~~~------------~-----~~~~~~~l~~~--~~p~~~~~~~p~~~-~Li~~~L~~dP 349 (720)
.+.|.||||||||-||++|.++. + ....+..|..+ .+|..-+...+.++ +++..+|..+|
T Consensus 270 KrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda 349 (463)
T KOG0607|consen 270 KRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDA 349 (463)
T ss_pred ccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccH
Confidence 99999999999999999443321 0 12334445543 45665555555555 99999999999
Q ss_pred CCCCChHHHHcCcccCCC
Q 004989 350 SGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 350 ~~Rpta~eiL~hp~~~~~ 367 (720)
.+|.++.++++|||++..
T Consensus 350 ~~rlsa~~vlnhPw~~~~ 367 (463)
T KOG0607|consen 350 KQRLSAAQVLNHPWVQRC 367 (463)
T ss_pred HhhhhhhhccCCcccccc
Confidence 999999999999999986
No 160
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=99.96 E-value=8.3e-31 Score=271.41 Aligned_cols=204 Identities=25% Similarity=0.363 Sum_probs=157.4
Q ss_pred hhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCcee
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
+|..++.+++||||+++++ ++.... .++++||+ .+++|.++|.+ ...+++.+++.++.||+.||.+||+.||+|
T Consensus 47 ~e~~~~~~l~~~~i~~~~~-~~~~~~---~~~~v~~~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H 121 (260)
T PF00069_consen 47 REIKILRRLRHPNIVQILD-VFQDDN---YLYIVMEYCPGGSLQDYLQK-NKPLSEEEILKIAYQILEALAYLHSKGIVH 121 (260)
T ss_dssp HHHHHHHHHTBTTBCHEEE-EEEESS---EEEEEEEEETTEBHHHHHHH-HSSBBHHHHHHHHHHHHHHHHHHHHTTEEE
T ss_pred hhhhccccccccccccccc-cccccc---cccccccccccccccccccc-cccccccccccccccccccccccccccccc
Confidence 5788999999999999999 554432 57899999 77799999962 334899999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccc
Q 004989 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
+||||+||+++.++.++|+|||.+...... .
T Consensus 122 ~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~-----------------------------------~-------------- 152 (260)
T PF00069_consen 122 RDIKPENILLDENGEVKLIDFGSSVKLSEN-----------------------------------N-------------- 152 (260)
T ss_dssp SSBSGGGEEESTTSEEEESSGTTTEESTST-----------------------------------T--------------
T ss_pred cccccccccccccccccccccccccccccc-----------------------------------c--------------
Confidence 999999999999999999999887321000 0
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCccccc-CCCCCccccchhhhchhhh
Q 004989 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-GAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~-~~~~s~~sDIwSLGvll~e 303 (720)
.......+++.|+|||++. +..++.++||||||+++|+
T Consensus 153 -----------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~ 191 (260)
T PF00069_consen 153 -----------------------------------------ENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYE 191 (260)
T ss_dssp -----------------------------------------SEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHH
T ss_pred -----------------------------------------ccccccccccccccccccccccccccccccccccccccc
Confidence 0001146799999999998 7779999999999999999
Q ss_pred ccc---cCCCCc--hHHHHHHHhhcCCCCcccccc---CchHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004989 304 LFC---PFSTGE--EKTRTMSSLRHRVLPPQLLLK---FPKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 304 Llt---pf~~~~--~~~~~~~~l~~~~~p~~~~~~---~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
|++ ||.... ..............+...... .+...+++.+||+.||++||++.++++||||
T Consensus 192 l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~~~~ 260 (260)
T PF00069_consen 192 LLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQQSREKSEELRDLIKKMLSKDPEQRPSAEELLKHPWF 260 (260)
T ss_dssp HHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTTSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTSGGG
T ss_pred ccccccccccccchhhhhhhhhcccccccccccccchhHHHHHHHHHHHccCChhHCcCHHHHhcCCCC
Confidence 999 666541 122222222222121111111 1455699999999999999999999999997
No 161
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.96 E-value=1.3e-29 Score=269.49 Aligned_cols=210 Identities=15% Similarity=0.184 Sum_probs=162.1
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++..++||||+++++ .+..+. ..|+|||| .|++|.+++... .+++.++..++.||+.||.|||+.||
T Consensus 64 ~~~e~~~l~~~~h~~v~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~i~~ql~~aL~~LH~~gi 137 (296)
T cd06654 64 IINEILVMRENKNPNIVNYLD-SYLVGD---ELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSNQV 137 (296)
T ss_pred HHHHHHHHHhCCCCCEeeEEE-EEEeCC---EEEEeecccCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 336677889999999999999 444433 68999999 899999998543 38999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.++|+|||.+....... .
T Consensus 138 ~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~---------------------------------~------------- 171 (296)
T cd06654 138 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ---------------------------------S------------- 171 (296)
T ss_pred ccCCCCHHHEEEcCCCCEEECccccchhccccc---------------------------------c-------------
Confidence 999999999999999999999988763211000 0
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......|++.|+|||.+.+..++.++|||||||++|
T Consensus 172 --------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~ 207 (296)
T cd06654 172 --------------------------------------------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAI 207 (296)
T ss_pred --------------------------------------------ccCcccCCccccCHHHHcCCCCCccchHHHHHHHHH
Confidence 000135788999999998888999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004989 303 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
+|++ ||..................+....... +...+|+.+||.++|.+|||+.++++||||.....
T Consensus 208 ~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~~~~~~~~~ 278 (296)
T cd06654 208 EMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIAKP 278 (296)
T ss_pred HHHhCCCCCCCCCHHHhHHHHhcCCCCCCCCccccCHHHHHHHHHHCcCCcccCcCHHHHhhChhhhccCC
Confidence 9999 6655444333222222222221222223 34569999999999999999999999999987633
No 162
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=99.96 E-value=1.6e-29 Score=265.92 Aligned_cols=210 Identities=19% Similarity=0.259 Sum_probs=157.7
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
...+|..++.+++||||+++++ ++..+. .+|+||||.+++|.+++......+++.+++.++.||+.||.|||+.||
T Consensus 45 ~~~~e~~~l~~~~~~~i~~~~~-~~~~~~---~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i 120 (286)
T cd07832 45 QALREIKALQACQHPYVVKLLD-VFPHGS---GFVLVMEYMPSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGI 120 (286)
T ss_pred HHHHHHHHHHhCCCCCCcceee-EEecCC---eeEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 3446777999999999999999 444433 679999999999999996655669999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+|+||||+||+++.++.++++|||.+........ .
T Consensus 121 ~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~-------------------------------~-------------- 155 (286)
T cd07832 121 MHRDLKPANLLISADGVLKIADFGLARLFSEEEP-------------------------------R-------------- 155 (286)
T ss_pred ecCCcCHHHEEEcCCCcEEEeeeeecccccCCCC-------------------------------C--------------
Confidence 9999999999999999999999988743211100 0
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC-CCccccchhhhchh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLL 301 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGvll 301 (720)
......|+.+|+|||.+.+.. ++.++|||||||++
T Consensus 156 --------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l 191 (286)
T cd07832 156 --------------------------------------------LYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIF 191 (286)
T ss_pred --------------------------------------------ccccccCcccccCceeeeccccCCchhHHHHHHHHH
Confidence 000135789999999987654 68999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcC--------------------CCCc-------cc-cccCchHHHHHHHcCCCCCC
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRHR--------------------VLPP-------QL-LLKFPKEASFCLWLLHPEPS 350 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~--------------------~~p~-------~~-~~~~p~~~~Li~~~L~~dP~ 350 (720)
|||++ +|............+... ..+. .. ........+|+.+||.++|.
T Consensus 192 ~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~ 271 (286)
T cd07832 192 AELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPS 271 (286)
T ss_pred HHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChh
Confidence 99999 343332221111111100 0000 00 11123445999999999999
Q ss_pred CCCChHHHHcCcccC
Q 004989 351 GRPKMGELLQSEFLN 365 (720)
Q Consensus 351 ~Rpta~eiL~hp~~~ 365 (720)
+|||++++|+||||.
T Consensus 272 ~R~~~~~~l~h~~~~ 286 (286)
T cd07832 272 KRLSAAEALRHPYFT 286 (286)
T ss_pred hCCCHHHHhhCcCcC
Confidence 999999999999984
No 163
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=99.96 E-value=2.7e-29 Score=264.74 Aligned_cols=209 Identities=15% Similarity=0.161 Sum_probs=155.6
Q ss_pred hhhhhhcccC-CCCCceecccceeecC-CCCCcEEEEEec-CCCCHHHHHh---CCCCCCCHHHHHHHHHHHHHHHHHHH
Q 004989 65 HSDGVELTHG-DHLRNQGGLSGVCENE-AAIDPFVHAIEW-GDVSLRQWLD---KPKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 65 ~~e~~~L~~l-~HpnIV~l~~~~~~~~-~~~~~~~lv~E~-~ggsL~~~L~---~~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
..|..++..+ +||||+++++.++... .....++++||| .|++|.+++. .....+++..+..++.||+.||.|||
T Consensus 62 ~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH 141 (286)
T cd06638 62 EAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLH 141 (286)
T ss_pred HHHHHHHHHHhcCCCeeeeeeeeeecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHH
Confidence 3566678887 7999999999444322 233468999999 8999999874 23345899999999999999999999
Q ss_pred HCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCC
Q 004989 139 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
+++|+||||||+||+++.++.++|+|||.+....... .
T Consensus 142 ~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~----------------------------------~-------- 179 (286)
T cd06638 142 VNKTIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTR----------------------------------L-------- 179 (286)
T ss_pred hCCccccCCCHHhEEECCCCCEEEccCCceeecccCC----------------------------------C--------
Confidence 9999999999999999999999999998873321000 0
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC-----CCCCcccc
Q 004989 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-----APVSCASD 293 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-----~~~s~~sD 293 (720)
......|++.|+|||++.. ..++.++|
T Consensus 180 ------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~D 211 (286)
T cd06638 180 ------------------------------------------------RRNTSVGTPFWMAPEVIACEQQLDSTYDARCD 211 (286)
T ss_pred ------------------------------------------------ccccccCCCcccChhhhchhhhccccccchhh
Confidence 0001357899999999853 33788999
Q ss_pred chhhhchhhhccc---cCCCCchHHHHHHHhhcCCCCcc-ccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004989 294 IYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQ-LLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 294 IwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~-~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
||||||++|||++ ||......... ..+.....+.. ....++ ...+|+.+||+.+|++|||+.|+++|+||
T Consensus 212 v~slGvi~~el~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~~~ 286 (286)
T cd06638 212 VWSLGITAIELGDGDPPLADLHPMRAL-FKIPRNPPPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVFI 286 (286)
T ss_pred hhhHHHHHHHHhcCCCCCCCCchhHHH-hhccccCCCcccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcccC
Confidence 9999999999998 55544332222 22222221111 122223 45699999999999999999999999997
No 164
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=99.96 E-value=2.5e-30 Score=292.85 Aligned_cols=209 Identities=21% Similarity=0.273 Sum_probs=154.7
Q ss_pred hhhhhcccCC-CCCceecccceee-c-CCC-CCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004989 66 SDGVELTHGD-HLRNQGGLSGVCE-N-EAA-IDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 66 ~e~~~L~~l~-HpnIV~l~~~~~~-~-~~~-~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
+|+.+|+.|. |||||.|++.... . ... ...++|.||| .|+.|-++|++ -...|++.++++||+|+++||.+||.
T Consensus 83 ~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~ 162 (738)
T KOG1989|consen 83 REIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHY 162 (738)
T ss_pred HHHHHHHHhcCCCceeeEeccccccccCCCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhc
Confidence 6777888887 9999999993332 2 223 4679999999 66899999942 23349999999999999999999999
Q ss_pred CC--ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCC
Q 004989 140 QG--IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 140 ~g--IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~ 217 (720)
.. |||||||-|||||+.+|+.||||||.++..-.... ..+++.
T Consensus 163 ~~pPiIHRDLKiENvLls~~g~~KLCDFGSatt~~~~~~-----------------~~~e~~------------------ 207 (738)
T KOG1989|consen 163 LKPPIIHRDLKIENVLLSADGNYKLCDFGSATTKILSPT-----------------SAQEVN------------------ 207 (738)
T ss_pred CCCccchhhhhhhheEEcCCCCEEeCcccccccccCCCc-----------------cHHHHH------------------
Confidence 87 99999999999999999999999998843211100 000000
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccc---cCCCCCccccc
Q 004989 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEEL---AGAPVSCASDI 294 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l---~~~~~s~~sDI 294 (720)
. .+. .....-|+.|+|||++ .+.+.+.++||
T Consensus 208 ------------------------------------~--ve~--------eI~k~TTp~YRsPEMIDlysg~pI~eKsDI 241 (738)
T KOG1989|consen 208 ------------------------------------Y--VEE--------EIEKYTTPQYRSPEMIDLYSGLPIGEKSDI 241 (738)
T ss_pred ------------------------------------H--HHH--------HHHhhCCccccChHHHhhhcCCCCcchhHH
Confidence 0 000 0112349999999987 56679999999
Q ss_pred hhhhchhhhccc---cCCCCchHHHHHHHhhcCCC-CccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 295 YRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVL-PPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 295 wSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~-p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|+|||+||-|+. ||...... .|.++.+ -|.+...+....+||..||++||.+||++-+++.
T Consensus 242 WALGclLYkLCy~t~PFe~sg~l-----aIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~ 306 (738)
T KOG1989|consen 242 WALGCLLYKLCYFTTPFEESGKL-----AILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLE 306 (738)
T ss_pred HHHHHHHHHHHHhCCCcCcCcce-----eEEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHH
Confidence 999999999987 88875332 1223222 2223344455569999999999999999999986
No 165
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=99.96 E-value=9e-30 Score=264.87 Aligned_cols=208 Identities=19% Similarity=0.214 Sum_probs=162.0
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CC
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-QG 141 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs-~g 141 (720)
..+|..++++++||||+++++ .+... ..+++++|| .+++|.+++......+++..+..++.||+.||.|||+ .|
T Consensus 46 ~~~e~~~l~~~~~~~i~~~~~-~~~~~---~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ 121 (265)
T cd06605 46 ILRELDILHKCNSPYIVGFYG-AFYNN---GDISICMEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHK 121 (265)
T ss_pred HHHHHHHHHHCCCCchhhhhe-eeecC---CEEEEEEEecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCC
Confidence 346777889999999999999 44444 368999999 7799999996554569999999999999999999999 99
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
++|+||||+||+++.++.++|+|||.+.......
T Consensus 122 i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~---------------------------------------------- 155 (265)
T cd06605 122 IIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSL---------------------------------------------- 155 (265)
T ss_pred eecCCCCHHHEEECCCCCEEEeecccchhhHHHH----------------------------------------------
Confidence 9999999999999999999999998763210000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
. ....++..|+|||.+.+..++.++|||||||++
T Consensus 156 ---------------------------------------------~-~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l 189 (265)
T cd06605 156 ---------------------------------------------A-KTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSL 189 (265)
T ss_pred ---------------------------------------------h-hcccCChhccCHHHHcCCCCCchhhHHHHHHHH
Confidence 0 003568889999999888899999999999999
Q ss_pred hhccc---cCCCCc----hHHHHHHHhhcCCCCccccc-cCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 302 FELFC---PFSTGE----EKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLlt---pf~~~~----~~~~~~~~l~~~~~p~~~~~-~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|+|++ ||.... .....+..+.....+..... ..+...+||.+||..||.+|||+.+++.||||+..
T Consensus 190 ~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~~~~ 263 (265)
T cd06605 190 IELATGRFPYPPENDPPDGIFELLQYIVNEPPPRLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEHPFIKKY 263 (265)
T ss_pred HHHHhCCCCCCccccccccHHHHHHHHhcCCCCCCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhCchhhcc
Confidence 99999 555431 22223333333222222222 23345699999999999999999999999999865
No 166
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=99.96 E-value=1.6e-29 Score=265.97 Aligned_cols=204 Identities=20% Similarity=0.243 Sum_probs=158.4
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC---------------CCCCHHHHHHHH
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---------------RSVDVYECLHIF 127 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~---------------~~l~~~~~~~i~ 127 (720)
..+|..++.+++||||+++++ ++.... ..|++||| .+++|.+++.... ..+++.+++.++
T Consensus 55 ~~~ei~~l~~l~h~~i~~~~~-~~~~~~---~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 130 (283)
T cd05048 55 FRQEAELMSDLQHPNIVCLLG-VCTKEQ---PTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIA 130 (283)
T ss_pred HHHHHHHHHhcCCcccceEEE-EEcCCC---ceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHH
Confidence 346778899999999999999 554432 57999999 8999999994321 347899999999
Q ss_pred HHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccc
Q 004989 128 RQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRR 207 (720)
Q Consensus 128 ~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l 207 (720)
.||+.||.|||+.||+||||||+||+++.++.++|+|||++......
T Consensus 131 ~~l~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~L~dfg~~~~~~~~--------------------------------- 177 (283)
T cd05048 131 IQIAAGMEYLSSHHFVHRDLAARNCLVGEGLTVKISDFGLSRDIYSA--------------------------------- 177 (283)
T ss_pred HHHHHHHHHHHhCCeeccccccceEEEcCCCcEEECCCcceeecccc---------------------------------
Confidence 99999999999999999999999999999999999999887432110
Q ss_pred cccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC
Q 004989 208 EDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP 287 (720)
Q Consensus 208 ~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 287 (720)
+. .. ......+++.|+|||.+.+..
T Consensus 178 -~~----------------------------------~~--------------------~~~~~~~~~~y~aPE~~~~~~ 202 (283)
T cd05048 178 -DY----------------------------------YR--------------------VQSKSLLPVRWMPPEAILYGK 202 (283)
T ss_pred -cc----------------------------------cc--------------------ccCCCcccccccCHHHhccCc
Confidence 00 00 000135678899999998888
Q ss_pred CCccccchhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 288 VSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 288 ~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
++.++|||||||++|||++ ||...... ..+..+..+..++......+...+|+.+||..||.+||++.||++
T Consensus 203 ~~~~sDv~slG~il~el~~~g~~p~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~ 278 (283)
T cd05048 203 FTTESDIWSFGVVLWEIFSYGLQPYYGFSNQ-EVIEMIRSRQLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHT 278 (283)
T ss_pred CchhhhHHHHHHHHHHHHcCCCCCCCCCCHH-HHHHHHHcCCcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 9999999999999999997 66554433 445555555444433333345569999999999999999999986
No 167
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=99.96 E-value=2.3e-29 Score=266.20 Aligned_cols=210 Identities=15% Similarity=0.141 Sum_probs=156.5
Q ss_pred hhhhhhcccC-CCCCceecccceeecCC-CCCcEEEEEec-CCCCHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHH
Q 004989 65 HSDGVELTHG-DHLRNQGGLSGVCENEA-AIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 65 ~~e~~~L~~l-~HpnIV~l~~~~~~~~~-~~~~~~lv~E~-~ggsL~~~L~~---~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
.+|..++.++ +||||+++++.+...+. ....+|++||| .|++|.++++. ....+++..++.++.||+.||.|||
T Consensus 66 ~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH 145 (291)
T cd06639 66 EAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLH 145 (291)
T ss_pred HHHHHHHHHhcCCCCeEEEEEEEEeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 3566677777 89999999994443322 23468999999 89999998842 3445899999999999999999999
Q ss_pred HCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCC
Q 004989 139 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
+.||+||||||+||+++.++.++|+|||.+....... .
T Consensus 146 ~~~ivH~dlkp~nili~~~~~~kl~dfg~~~~~~~~~----------------------------------~-------- 183 (291)
T cd06639 146 NNRIIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTR----------------------------------L-------- 183 (291)
T ss_pred hCCeeccCCCHHHEEEcCCCCEEEeecccchhccccc----------------------------------c--------
Confidence 9999999999999999999999999999874321110 0
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC-----CCcccc
Q 004989 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-----VSCASD 293 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-----~s~~sD 293 (720)
......|+..|+|||.+.... ++.++|
T Consensus 184 ------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~D 215 (291)
T cd06639 184 ------------------------------------------------RRNTSVGTPFWMAPEVIACEQQYDYSYDARCD 215 (291)
T ss_pred ------------------------------------------------cccCccCCccccChhhhcCCCCcccccCCccc
Confidence 000135788999999986432 688999
Q ss_pred chhhhchhhhccc---cCCCCchHHHHHHHhhcCCCCcc-ccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccC
Q 004989 294 IYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQ-LLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLN 365 (720)
Q Consensus 294 IwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~-~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~ 365 (720)
||||||++|||++ ||......... ..+.....+.. ....+ +...+||.+||+++|++||++.|+++||||+
T Consensus 216 i~slGvi~~el~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~ 291 (291)
T cd06639 216 VWSLGITAIELGDGDPPLFDMHPVKTL-FKIPRNPPPTLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEHPFIK 291 (291)
T ss_pred hHHHHHHHHHHhhCCCCCCCCcHHHHH-HHHhcCCCCCCCcccccCHHHHHHHHHHhhcChhhCcCHHHHhcCcccC
Confidence 9999999999999 55544333222 22322222111 11122 3445999999999999999999999999984
No 168
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=99.96 E-value=1.8e-29 Score=267.23 Aligned_cols=205 Identities=15% Similarity=0.151 Sum_probs=162.2
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++||||+++++ ++..+. .+|++||| .+++|.+++... ..+++..++.++.||+.||.|||+.|
T Consensus 47 ~~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~~v~e~~~~~~L~~~~~~~-~~l~~~~~~~~~~qil~~l~~lH~~~ 121 (290)
T cd05580 47 HVLNEKRILQSIRHPFLVNLYG-SFQDDS---NLYLVMEYVPGGELFSHLRKS-GRFPEPVARFYAAQVVLALEYLHSLD 121 (290)
T ss_pred HHHHHHHHHHhCCCCCccceee-EEEcCC---eEEEEEecCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 4447788999999999999999 444443 57999999 699999999554 45999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+|+||+|+||+++.++.++|+|||++......
T Consensus 122 i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~----------------------------------------------- 154 (290)
T cd05580 122 IVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR----------------------------------------------- 154 (290)
T ss_pred EecCCCCHHHEEECCCCCEEEeeCCCccccCCC-----------------------------------------------
Confidence 999999999999999999999999877322100
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
.....|++.|+|||.+.+..++.++||||||+++
T Consensus 155 ----------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 188 (290)
T cd05580 155 ----------------------------------------------TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILI 188 (290)
T ss_pred ----------------------------------------------CCCCCCCccccChhhhcCCCCCccccHHHHHHHH
Confidence 0013578999999999888889999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~ 367 (720)
|+|++ ||...... .....+.....+ ......+...+++.+||..||.+|+ +++|+++||||...
T Consensus 189 ~~l~~g~~p~~~~~~~-~~~~~~~~~~~~-~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~ 260 (290)
T cd05580 189 YEMLAGYPPFFDDNPI-QIYEKILEGKVR-FPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWFAGI 260 (290)
T ss_pred HHHHhCCCCCCCCCHH-HHHHHHhcCCcc-CCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcCcccccC
Confidence 99999 66554432 233333322211 1111234556999999999999999 89999999999775
No 169
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.96 E-value=1.2e-29 Score=267.39 Aligned_cols=201 Identities=18% Similarity=0.224 Sum_probs=152.7
Q ss_pred hcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCC
Q 004989 70 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 148 (720)
Q Consensus 70 ~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLK 148 (720)
++...+||||+.+++ .+..+. .+++|||| .|++|.+++...+ .+++..+..++.||+.||.|||++||+|||||
T Consensus 50 ~~~~~~~~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~i~~~~-~l~~~~~~~i~~qi~~al~~lH~~~ivH~dik 124 (279)
T cd05633 50 LVSTGDCPFIVCMTY-AFHTPD---KLCFILDLMNGGDLHYHLSQHG-VFSEKEMRFYATEIILGLEHMHNRFVVYRDLK 124 (279)
T ss_pred HHhhCCCCcEeEEEE-EEecCC---eEEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCC
Confidence 445568999999988 554443 57999999 9999999995544 49999999999999999999999999999999
Q ss_pred CCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccC
Q 004989 149 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 228 (720)
Q Consensus 149 P~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~ 228 (720)
|+|||++.++.++++|||++...+...
T Consensus 125 p~Nil~~~~~~~~l~dfg~~~~~~~~~----------------------------------------------------- 151 (279)
T cd05633 125 PANILLDEHGHVRISDLGLACDFSKKK----------------------------------------------------- 151 (279)
T ss_pred HHHEEECCCCCEEEccCCcceeccccC-----------------------------------------------------
Confidence 999999999999999998873221000
Q ss_pred CCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC-CCCCccccchhhhchhhhccc-
Q 004989 229 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFELFC- 306 (720)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sDIwSLGvll~eLlt- 306 (720)
.....||+.|+|||.+.+ ..++.++|||||||++|+|++
T Consensus 152 ---------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g 192 (279)
T cd05633 152 ---------------------------------------PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRG 192 (279)
T ss_pred ---------------------------------------ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhC
Confidence 001257899999999864 458999999999999999999
Q ss_pred --cCCCCchHH-HHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCCc
Q 004989 307 --PFSTGEEKT-RTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEPR 368 (720)
Q Consensus 307 --pf~~~~~~~-~~~~~l~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~~ 368 (720)
||....... ....... ...+..++... ++..+|+.+||+.||++|| ++.|+++||||+...
T Consensus 193 ~~pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~~~~~~ 262 (279)
T cd05633 193 HSPFRQHKTKDKHEIDRMT-LTVNVELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFKGID 262 (279)
T ss_pred CCCcCCCCCcCHHHHHHHh-hcCCcCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCccccCCC
Confidence 664332111 1111111 11222222233 4556999999999999999 699999999999863
No 170
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=99.96 E-value=2.7e-29 Score=259.74 Aligned_cols=206 Identities=20% Similarity=0.270 Sum_probs=159.5
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+...|..+|++++||||+++++ .+..+. .++++||| .+++|.+++... ...+++..++.++.|++.+|.|||++
T Consensus 45 ~~~~e~~~l~~~~~~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~ 120 (256)
T cd08220 45 AAQNECQVLKLLSHPNIIEYYE-NFLEDK---ALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTK 120 (256)
T ss_pred HHHHHHHHHhhCCCCchhheee-eEecCC---EEEEEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 4447788999999999999999 443332 57999999 899999999543 44589999999999999999999999
Q ss_pred CceeccCCCCcEEEccCC-ceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFN-HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~-~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
||+|+||||+||+++.++ .++|+|||.+...+...
T Consensus 121 ~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~-------------------------------------------- 156 (256)
T cd08220 121 LILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKS-------------------------------------------- 156 (256)
T ss_pred CeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCc--------------------------------------------
Confidence 999999999999998554 57998888773321110
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhc
Q 004989 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
......|++.|+|||.+.+..++.++|||||||
T Consensus 157 -----------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~ 189 (256)
T cd08220 157 -----------------------------------------------KAYTVVGTPCYISPELCEGKPYNQKSDIWALGC 189 (256)
T ss_pred -----------------------------------------------cccccccCCcccCchhccCCCCCcccchHHHHH
Confidence 000135788999999998888899999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004989 300 LLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
++|+|++ ||............ .....++......+...+|+.+||+++|.+|||+.|+++||||
T Consensus 190 ~l~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~p~~ 256 (256)
T cd08220 190 VLYELASLKRAFEAANLPALVLKI-MSGTFAPISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQPIC 256 (256)
T ss_pred HHHHHHhCCCCcccCchHHHHHHH-HhcCCCCCCCCcCHHHHHHHHHHccCChhhCCCHHHHhhCCCC
Confidence 9999999 66655444333332 2222222222234556699999999999999999999999997
No 171
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=99.96 E-value=2.2e-29 Score=262.48 Aligned_cols=211 Identities=18% Similarity=0.178 Sum_probs=158.4
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++.+++||||+++++ ++.+.. ...++++||| .+++|.+++.+.. .+++..++.++.||+.||.|||++|
T Consensus 50 ~~~~E~~~l~~l~h~~i~~~~~-~~~~~~-~~~~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~l~~~l~~lH~~~ 126 (265)
T cd06652 50 ALECEIQLLKNLLHERIVQYYG-CLRDPM-ERTLSIFMEHMPGGSIKDQLKSYG-ALTENVTRKYTRQILEGVSYLHSNM 126 (265)
T ss_pred HHHHHHHHHHhcCCCCeeeEEe-EeccCC-CceEEEEEEecCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 4457888999999999999999 443322 2357899999 8999999996543 4899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+|+||||+||+++.++.++|+|||.+......... .-
T Consensus 127 i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~~~-------------------------------~~----------- 164 (265)
T cd06652 127 IVHRDIKGANILRDSVGNVKLGDFGASKRLQTICLS-------------------------------GT----------- 164 (265)
T ss_pred EecCCCCHHHEEecCCCCEEECcCcccccccccccc-------------------------------cc-----------
Confidence 999999999999999999999999887432110000 00
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......|+..|+|||++.+..++.++|||||||++
T Consensus 165 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il 199 (265)
T cd06652 165 ---------------------------------------------GMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTV 199 (265)
T ss_pred ---------------------------------------------ccccCCCCccccChhhhcCCCCCcchhHHHHHHHH
Confidence 00013578899999999888899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccC
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLN 365 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~ 365 (720)
|||++ ||........... +......+..+...+ ...+++.+||. +|+.||+++++++|||+.
T Consensus 200 ~el~~g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~~~~~ 265 (265)
T cd06652 200 VEMLTEKPPWAEFEAMAAIFK-IATQPTNPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRHTFVH 265 (265)
T ss_pred HHHhhCCCCCCccchHHHHHH-HhcCCCCCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcCcccC
Confidence 99999 5544433333222 222222222222333 34589999994 999999999999999984
No 172
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=99.96 E-value=2.4e-29 Score=260.11 Aligned_cols=204 Identities=15% Similarity=0.188 Sum_probs=154.5
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++||||+++++ ++.... .+|+|||| .+++|.+++......+++..++.++.||+.||.|||++|
T Consensus 39 ~~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ 114 (252)
T cd05084 39 KFLQEARILKQYSHPNIVRLIG-VCTQKQ---PIYIVMELVQGGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKH 114 (252)
T ss_pred HHHHHHHHHHhCCCCCcceEEE-EEcCCC---CeEEEEeeccCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3446777899999999999999 554443 57999999 899999999665556899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.++|+|||.+...... .+ .
T Consensus 115 i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~----------------------------------~~---~------- 150 (252)
T cd05084 115 CIHRDLAARNCLVTEKNVLKISDFGMSREEEDG----------------------------------VY---A------- 150 (252)
T ss_pred ccccccchheEEEcCCCcEEECccccCcccccc----------------------------------cc---c-------
Confidence 999999999999999999999999887422100 00 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
........+..|+|||.+.+..++.++|||||||++
T Consensus 151 --------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il 186 (252)
T cd05084 151 --------------------------------------------STGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILL 186 (252)
T ss_pred --------------------------------------------ccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHH
Confidence 000001224569999999888899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||...... .....+.....++ ..... +...+|+.+||+++|++|||+.++++
T Consensus 187 ~e~~~~~~~p~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 248 (252)
T cd05084 187 WEAFSLGAVPYANLSNQ-QTREAIEQGVRLP-CPELCPDAVYRLMERCWEYDPGQRPSFSTVHQ 248 (252)
T ss_pred HHHHhCCCCCccccCHH-HHHHHHHcCCCCC-CcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 99997 44433322 3333333332222 22333 44459999999999999999999975
No 173
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=99.96 E-value=3.4e-29 Score=262.38 Aligned_cols=208 Identities=19% Similarity=0.246 Sum_probs=163.8
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..+++.++||||+++++ .+.++ ..+|+++|| .+++|.+++... .+++..++.++.||+.||.|||++||
T Consensus 46 ~~~e~~~l~~l~h~~i~~~~~-~~~~~---~~~~~v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~ql~~~l~~lh~~~i 119 (274)
T cd06609 46 IQQEIQFLSQCRSPYITKYYG-SFLKG---SKLWIIMEYCGGGSCLDLLKPG--KLDETYIAFILREVLLGLEYLHEEGK 119 (274)
T ss_pred HHHHHHHHHHcCCCCeeeeeE-EEEEC---CeEEEEEEeeCCCcHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 346777899999999999999 44444 368999999 899999999654 58999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+|+||+|+||+++.++.++|+|||.+...+....
T Consensus 120 ~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~---------------------------------------------- 153 (274)
T cd06609 120 IHRDIKAANILLSEEGDVKLADFGVSGQLTSTMS---------------------------------------------- 153 (274)
T ss_pred ccCCCCHHHEEECCCCCEEEcccccceeeccccc----------------------------------------------
Confidence 9999999999999999999999988743321100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......|++.|+|||.+.+..++.++|||||||++|
T Consensus 154 --------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~ 189 (274)
T cd06609 154 --------------------------------------------KRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAI 189 (274)
T ss_pred --------------------------------------------ccccccCCccccChhhhccCCCCchhhHHHHHHHHH
Confidence 001135788999999999888999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCCCcccccc-C-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004989 303 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLK-F-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~-~-p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
+|++ ||...... .....+.... ++.+... . +...+++.+||..+|++|||++++++||||.....
T Consensus 190 ~l~tg~~p~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~~~~~~~~~ 259 (274)
T cd06609 190 ELAKGEPPLSDLHPM-RVLFLIPKNN-PPSLEGNKFSKPFKDFVSLCLNKDPKERPSAKELLKHKFIKKAKK 259 (274)
T ss_pred HHHhCCCCcccCchH-HHHHHhhhcC-CCCCcccccCHHHHHHHHHHhhCChhhCcCHHHHhhChhhcCCCc
Confidence 9999 55443332 2223333332 2222222 3 45569999999999999999999999999988644
No 174
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.96 E-value=2.3e-29 Score=265.37 Aligned_cols=212 Identities=14% Similarity=0.146 Sum_probs=160.9
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC--CCCCCHHHHHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP--KRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~--~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
+..+|..+|.+++||||+++++ .+.... .+|++||| .|++|.+++... ...+++..++.++.||+.||.|||+
T Consensus 45 ~~~~e~~~l~~~~~~~i~~~~~-~~~~~~---~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~ 120 (286)
T cd06622 45 QIIMELDILHKAVSPYIVDFYG-AFFIEG---AVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKE 120 (286)
T ss_pred HHHHHHHHHHhcCCCcHHhhhh-heecCC---eEEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 3446778899999999999999 444432 67999999 899999988553 2358999999999999999999997
Q ss_pred -CCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCC
Q 004989 140 -QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 140 -~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
.||+|+||||+||+++.++.++|+|||.+.......
T Consensus 121 ~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~------------------------------------------- 157 (286)
T cd06622 121 EHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASL------------------------------------------- 157 (286)
T ss_pred cCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCCc-------------------------------------------
Confidence 599999999999999999999999998873221000
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC------CCccc
Q 004989 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP------VSCAS 292 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~------~s~~s 292 (720)
.....|++.|+|||.+.+.. ++.++
T Consensus 158 -------------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~ 188 (286)
T cd06622 158 -------------------------------------------------AKTNIGCQSYMAPERIKSGGPNQNPTYTVQS 188 (286)
T ss_pred -------------------------------------------------cccCCCccCccCcchhcCCCCCccCCCCccc
Confidence 00124688899999985543 58899
Q ss_pred cchhhhchhhhccc---cCCCCchH--HHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 293 DIYRLGVLLFELFC---PFSTGEEK--TRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 293 DIwSLGvll~eLlt---pf~~~~~~--~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|||||||++|+|++ ||...... ...+..+.....+.......+...+|+.+||+.+|.+||++.++++||||...
T Consensus 189 DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~~~~~~ 268 (286)
T cd06622 189 DVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDPPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPWLVKY 268 (286)
T ss_pred chHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcCCCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcChhhhhc
Confidence 99999999999999 56443221 12222333333333222233445699999999999999999999999999877
Q ss_pred ccc
Q 004989 368 RDS 370 (720)
Q Consensus 368 ~~~ 370 (720)
...
T Consensus 269 ~~~ 271 (286)
T cd06622 269 KNA 271 (286)
T ss_pred cCC
Confidence 443
No 175
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=99.96 E-value=1.7e-29 Score=277.92 Aligned_cols=204 Identities=15% Similarity=0.179 Sum_probs=154.5
Q ss_pred hhhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC---------------------------
Q 004989 65 HSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK--------------------------- 115 (720)
Q Consensus 65 ~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~--------------------------- 115 (720)
.+|..+|..+ +|||||++++ .+.... ..+++||| .||+|.+++....
T Consensus 86 ~~Ei~il~~l~~HpnIv~l~~-~~~~~~---~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (375)
T cd05104 86 MSELKVLSYLGNHINIVNLLG-ACTVGG---PTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMS 161 (375)
T ss_pred HHHHHHHHHhcCCcceeeeee-eeccCC---cceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhccc
Confidence 3678889888 8999999999 554443 56999999 9999999994321
Q ss_pred -----------------------------------------------CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCC
Q 004989 116 -----------------------------------------------RSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 148 (720)
Q Consensus 116 -----------------------------------------------~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLK 148 (720)
..+++..++.++.||+.||.|||++||+|||||
T Consensus 162 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlk 241 (375)
T cd05104 162 CDSLNEYMDMKPGVSYVVPTKADKRRSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLA 241 (375)
T ss_pred chhhhhhhhcCCCcccccccccccccccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCc
Confidence 247888999999999999999999999999999
Q ss_pred CCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccC
Q 004989 149 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 228 (720)
Q Consensus 149 P~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~ 228 (720)
|+|||++.++.++|+|||++....... .+
T Consensus 242 p~Nill~~~~~~kl~DfG~a~~~~~~~---------------------------------~~------------------ 270 (375)
T cd05104 242 ARNILLTHGRITKICDFGLARDIRNDS---------------------------------NY------------------ 270 (375)
T ss_pred hhhEEEECCCcEEEecCccceeccCcc---------------------------------cc------------------
Confidence 999999999999999999874321110 00
Q ss_pred CCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhccc--
Q 004989 229 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 306 (720)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt-- 306 (720)
. ......++..|+|||++.+..++.++|||||||++|||++
T Consensus 271 -------------------~------------------~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g 313 (375)
T cd05104 271 -------------------V------------------VKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLG 313 (375)
T ss_pred -------------------c------------------ccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcC
Confidence 0 0000234677999999998889999999999999999997
Q ss_pred --cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 307 --PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 307 --pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
||............+.....+.......++..+|+.+||+.||++||++.||++
T Consensus 314 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 369 (375)
T cd05104 314 SSPYPGMPVDSKFYKMIKEGYRMLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQ 369 (375)
T ss_pred CCCCCCCCchHHHHHHHHhCccCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHH
Confidence 565543333344444433222221122234569999999999999999999986
No 176
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=99.96 E-value=1.6e-29 Score=266.01 Aligned_cols=211 Identities=16% Similarity=0.193 Sum_probs=157.2
Q ss_pred hchhhhhhcccC-CCCCceecccceeecC--CCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHG-DHLRNQGGLSGVCENE--AAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAA 137 (720)
Q Consensus 63 r~~~e~~~L~~l-~HpnIV~l~~~~~~~~--~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yL 137 (720)
+.+.|..++.++ +||||+++++.++... .....+|++||| .+++|.+++.. ....+++..++.++.||+.||.||
T Consensus 58 ~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~L 137 (282)
T cd06636 58 EIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHL 137 (282)
T ss_pred HHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHH
Confidence 344666777777 7999999999444322 223468999999 78899999843 334588999999999999999999
Q ss_pred HHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCC
Q 004989 138 HSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 138 Hs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~ 217 (720)
|++||+|+||||+||+++.++.++|+|||.+........
T Consensus 138 H~~~ivH~dl~~~nili~~~~~~~l~dfg~~~~~~~~~~----------------------------------------- 176 (282)
T cd06636 138 HAHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVG----------------------------------------- 176 (282)
T ss_pred HHCCcccCCCCHHHEEECCCCCEEEeeCcchhhhhcccc-----------------------------------------
Confidence 999999999999999999999999999988732210000
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCccccc-----CCCCCccc
Q 004989 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-----GAPVSCAS 292 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~-----~~~~s~~s 292 (720)
......|++.|+|||.+. +..++.++
T Consensus 177 -------------------------------------------------~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~ 207 (282)
T cd06636 177 -------------------------------------------------RRNTFIGTPYWMAPEVIACDENPDATYDYRS 207 (282)
T ss_pred -------------------------------------------------CCCcccccccccCHhhcCcccCcCcCCCccc
Confidence 000136789999999986 33488899
Q ss_pred cchhhhchhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004989 293 DIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 293 DIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
|||||||++|||++ ||.......... .+.....+......++ ...+||.+||+.||.+||++.|||+||||
T Consensus 208 DvwslG~~l~el~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~~~~ 282 (282)
T cd06636 208 DIWSLGITAIEMAEGAPPLCDMHPMRALF-LIPRNPPPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKHPFI 282 (282)
T ss_pred chhHHHHHHHHHHhCCCCccccCHHhhhh-hHhhCCCCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhcCCCC
Confidence 99999999999999 554433322222 2222222222222333 45699999999999999999999999997
No 177
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.96 E-value=6.2e-30 Score=238.71 Aligned_cols=238 Identities=17% Similarity=0.220 Sum_probs=177.0
Q ss_pred ccccCCCCCC---cccccccccCCCCccchhhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHH
Q 004989 35 SGVSDRNPRL---LRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWL 111 (720)
Q Consensus 35 ~~~~~~~~~~---~~~~r~~~~~~~~~~~~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L 111 (720)
.+++.+|... ++-+|+.+..+... .--..-||+.+|..++|.|||+++++ ...+. .+.+|+||+..+|..+.
T Consensus 17 tvfkarn~~t~eivalkrvrlddddeg-vpssalreicllkelkhknivrl~dv-lhsdk---kltlvfe~cdqdlkkyf 91 (292)
T KOG0662|consen 17 TVFKARNRETHEIVALKRVRLDDDDEG-VPSSALREICLLKELKHKNIVRLHDV-LHSDK---KLTLVFEFCDQDLKKYF 91 (292)
T ss_pred eeEecccCCccceEEEEEEeccCCCCC-CcHHHHHHHHHHHHhhhcceeehhhh-hccCc---eeEEeHHHhhHHHHHHH
Confidence 3455555443 34444444333211 11133377889999999999999994 44443 46899999999999999
Q ss_pred hCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCC
Q 004989 112 DKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLS 191 (720)
Q Consensus 112 ~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~ 191 (720)
..-++.++.+.++.++.|++.||.|+|++++.||||||.|+||+.+|.+|++|||+++.+|.+..+.
T Consensus 92 dslng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ngelkladfglarafgipvrcy------------- 158 (292)
T KOG0662|consen 92 DSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCY------------- 158 (292)
T ss_pred HhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCcEEecccchhhhcCCceEee-------------
Confidence 7777779999999999999999999999999999999999999999999999999997777662210
Q ss_pred CCCchhhhhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCcccccc
Q 004989 192 SPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILL 271 (720)
Q Consensus 192 ~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~ 271 (720)
...
T Consensus 159 -----------------------------------------------------------------------------sae 161 (292)
T KOG0662|consen 159 -----------------------------------------------------------------------------SAE 161 (292)
T ss_pred -----------------------------------------------------------------------------ece
Confidence 003
Q ss_pred ccCCcccCcccccCCC-CCccccchhhhchhhhccc---cCCCC-chHHHHHHHhhcC------CCC-----------cc
Q 004989 272 METNWYASPEELAGAP-VSCASDIYRLGVLLFELFC---PFSTG-EEKTRTMSSLRHR------VLP-----------PQ 329 (720)
Q Consensus 272 ~GT~~Y~APE~l~~~~-~s~~sDIwSLGvll~eLlt---pf~~~-~~~~~~~~~l~~~------~~p-----------~~ 329 (720)
+-|.||++|.++.|.. |+++.|+||.|||+.||.. |..+. +...+.+...+.- ..| |.
T Consensus 162 vvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~yp~ 241 (292)
T KOG0662|consen 162 VVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYPI 241 (292)
T ss_pred eeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCcccCC
Confidence 5699999999999988 9999999999999999998 54444 3333333332210 000 00
Q ss_pred cc------ccCc----hHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 330 LL------LKFP----KEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 330 ~~------~~~p----~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
++ ...| ...+|+.++|.-+|..|.+++++|+||||...
T Consensus 242 ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqhpyf~d~ 289 (292)
T KOG0662|consen 242 YPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQHPYFSDF 289 (292)
T ss_pred ccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcCcccccc
Confidence 00 0111 22489999999999999999999999999865
No 178
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=99.96 E-value=1.8e-29 Score=266.79 Aligned_cols=207 Identities=15% Similarity=0.268 Sum_probs=155.1
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..+|..++++++||||+++++ ++.+.. ..|+||||.+++|.+++......+++..++.++.||+.||.|||++||+
T Consensus 50 ~~~E~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~ 125 (291)
T cd07844 50 AIREASLLKDLKHANIVTLHD-IIHTKK---TLTLVFEYLDTDLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVL 125 (291)
T ss_pred HHHHHHHHhhCCCcceeeEEE-EEecCC---eEEEEEecCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 346888999999999999999 554443 6799999966799999966555689999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+||+++.++.++|+|||.+.....+..
T Consensus 126 H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~----------------------------------------------- 158 (291)
T cd07844 126 HRDLKPQNLLISERGELKLADFGLARAKSVPSK----------------------------------------------- 158 (291)
T ss_pred cccCCHHHEEEcCCCCEEECccccccccCCCCc-----------------------------------------------
Confidence 999999999999999999999988732211000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC-CCCccccchhhhchhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLF 302 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGvll~ 302 (720)
......++..|+|||.+.+. .++.++|||||||++|
T Consensus 159 -------------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~ 195 (291)
T cd07844 159 -------------------------------------------TYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFY 195 (291)
T ss_pred -------------------------------------------cccccccccccCCcHHhhcCcccCcHHHHHHHHHHHH
Confidence 00002457889999998764 4889999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhc---CC---------------------C-Cccc----ccc--CchHHHHHHHcCCCC
Q 004989 303 ELFC---PFSTGEEKTRTMSSLRH---RV---------------------L-PPQL----LLK--FPKEASFCLWLLHPE 348 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~---~~---------------------~-p~~~----~~~--~p~~~~Li~~~L~~d 348 (720)
+|++ ||............+.. .. . +..+ ... .+...+|+.+||+++
T Consensus 196 ~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~ 275 (291)
T cd07844 196 EMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYE 275 (291)
T ss_pred HHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccC
Confidence 9998 55443322111111100 00 0 0000 011 144559999999999
Q ss_pred CCCCCChHHHHcCccc
Q 004989 349 PSGRPKMGELLQSEFL 364 (720)
Q Consensus 349 P~~Rpta~eiL~hp~~ 364 (720)
|.+|||+.++|+||||
T Consensus 276 p~~Rps~~e~l~~~~f 291 (291)
T cd07844 276 PKKRISAAEAMKHPYF 291 (291)
T ss_pred cccccCHHHHhcCCCC
Confidence 9999999999999998
No 179
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.96 E-value=5.8e-30 Score=280.30 Aligned_cols=193 Identities=22% Similarity=0.247 Sum_probs=151.9
Q ss_pred hhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccC
Q 004989 69 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 147 (720)
Q Consensus 69 ~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDL 147 (720)
..+..-+||||+++.+ ++.++. ++|+|||+ .|+-|.+.+.... ....++..|++||+.||.|||++|||||||
T Consensus 368 ~~~~~~~h~niv~~~~-v~~~~~---~~~~v~e~l~g~ell~ri~~~~--~~~~e~~~w~~~lv~Av~~LH~~gvvhRDL 441 (612)
T KOG0603|consen 368 ISLLVRDHPNIVKSHD-VYEDGK---EIYLVMELLDGGELLRRIRSKP--EFCSEASQWAAELVSAVDYLHEQGVVHRDL 441 (612)
T ss_pred hhhhhcCCCcceeecc-eecCCc---eeeeeehhccccHHHHHHHhcc--hhHHHHHHHHHHHHHHHHHHHhcCeeecCC
Confidence 3455578999999999 776665 57999999 7776766664433 223788899999999999999999999999
Q ss_pred CCCcEEE-ccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccc
Q 004989 148 RPSCFVM-SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 226 (720)
Q Consensus 148 KP~NILl-~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~ 226 (720)
||+|||+ ...++++|+|||.++..... +
T Consensus 442 kp~NIL~~~~~g~lrltyFG~a~~~~~~--------------------------------------------------~- 470 (612)
T KOG0603|consen 442 KPGNILLDGSAGHLRLTYFGFWSELERS--------------------------------------------------C- 470 (612)
T ss_pred ChhheeecCCCCcEEEEEechhhhCchh--------------------------------------------------h-
Confidence 9999999 58999999999988432111 0
Q ss_pred cCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhccc
Q 004989 227 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC 306 (720)
Q Consensus 227 q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt 306 (720)
...+=|..|.|||++....|+.++||||||++||+||+
T Consensus 471 ------------------------------------------~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~ 508 (612)
T KOG0603|consen 471 ------------------------------------------DTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLT 508 (612)
T ss_pred ------------------------------------------cccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHh
Confidence 00133788999999998889999999999999999999
Q ss_pred ---cCCCCchHHHHHHHhhcCCCCccccccCchHH-HHHHHcCCCCCCCCCChHHHHcCccc
Q 004989 307 ---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 307 ---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~-~Li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
||........++..+ .++.+....+..+ +|+.+||++||.+||++.+++.||||
T Consensus 509 G~tp~~~~P~~~ei~~~i----~~~~~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~ 566 (612)
T KOG0603|consen 509 GRTLFAAHPAGIEIHTRI----QMPKFSECVSDEAKDLLQQLLQVDPALRLGADEIGAHPWF 566 (612)
T ss_pred CCCccccCCchHHHHHhh----cCCccccccCHHHHHHHHHhccCChhhCcChhhhccCcch
Confidence 555444433444444 4444444445544 99999999999999999999999999
No 180
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.96 E-value=4.7e-29 Score=263.62 Aligned_cols=213 Identities=18% Similarity=0.236 Sum_probs=160.6
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHh---CCCCCCCHHHHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLD---KPKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~---~~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
+..+|..++++++||||+++++ ++.... ...+|++||| .|++|.+++. .....+++..+..++.||+.||.|||
T Consensus 45 ~~~~e~~~l~~l~h~~iv~~~~-~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH 122 (287)
T cd06621 45 QILRELEINKSCKSPYIVKYYG-AFLDES-SSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLH 122 (287)
T ss_pred HHHHHHHHHHhCCCCCeeeeee-EEEccC-CCeEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 3446778999999999999999 443332 2357999999 8999998873 23455899999999999999999999
Q ss_pred HCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCC
Q 004989 139 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
+.|++|+||+|+||+++.++.++|+|||++.......
T Consensus 123 ~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~------------------------------------------- 159 (287)
T cd06621 123 SRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSL------------------------------------------- 159 (287)
T ss_pred HCCcccCCCCHHHEEEecCCeEEEeeccccccccccc-------------------------------------------
Confidence 9999999999999999999999999998873211000
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhh
Q 004989 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
.....++..|+|||.+.+..++.++||||||
T Consensus 160 -------------------------------------------------~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG 190 (287)
T cd06621 160 -------------------------------------------------AGTFTGTSFYMAPERIQGKPYSITSDVWSLG 190 (287)
T ss_pred -------------------------------------------------cccccCCccccCHHHhcCCCCCchhhHHHHH
Confidence 0012457889999999888899999999999
Q ss_pred chhhhccc---cCCCCc----hHHHHHHHhhcCCCCcccc------ccCc-hHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004989 299 VLLFELFC---PFSTGE----EKTRTMSSLRHRVLPPQLL------LKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 299 vll~eLlt---pf~~~~----~~~~~~~~l~~~~~p~~~~------~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
|++|+|++ ||.... ........+... .++.+. ..++ ...+|+.+||.++|++|||+.|++.||||
T Consensus 191 ~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~~ 269 (287)
T cd06621 191 LTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNM-PNPELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWI 269 (287)
T ss_pred HHHHHHHhCCCCCCcccCCCCChHHHHHHHhcC-CchhhccCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhCccc
Confidence 99999999 554431 112222222221 111111 1222 34599999999999999999999999999
Q ss_pred CCCccc
Q 004989 365 NEPRDS 370 (720)
Q Consensus 365 ~~~~~~ 370 (720)
......
T Consensus 270 ~~~~~~ 275 (287)
T cd06621 270 KAQMKK 275 (287)
T ss_pred cccccc
Confidence 776443
No 181
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.96 E-value=2.9e-29 Score=268.06 Aligned_cols=215 Identities=18% Similarity=0.208 Sum_probs=160.4
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..+|..++.+++||||+++++ ++.... ...+++||||.+++|.+++......+++.+++.++.||+.||.|||+.|++
T Consensus 53 ~~~E~~~l~~l~h~~i~~~~~-~~~~~~-~~~~~lv~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~ 130 (309)
T cd07845 53 SLREITLLLNLRHPNIVELKE-VVVGKH-LDSIFLVMEYCEQDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFII 130 (309)
T ss_pred hhHHHHHHHhCCCCCCcceEE-EEecCC-CCeEEEEEecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 346788999999999999999 443322 235799999977799999965556699999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+||+++.++.++|+|||.+...+....
T Consensus 131 H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~~----------------------------------------------- 163 (309)
T cd07845 131 HRDLKVSNLLLTDKGCLKIADFGLARTYGLPAK----------------------------------------------- 163 (309)
T ss_pred cCCCCHHHEEECCCCCEEECccceeeecCCccC-----------------------------------------------
Confidence 999999999999999999999988743321100
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC-CCCccccchhhhchhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLF 302 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGvll~ 302 (720)
......+++.|+|||.+.+. .++.++|||||||++|
T Consensus 164 -------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~ 200 (309)
T cd07845 164 -------------------------------------------PMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILA 200 (309)
T ss_pred -------------------------------------------CCCcccccccccChhhhcCCCCcCchHHHHHHHHHHH
Confidence 00012457889999998764 4899999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcC--------------------CCCcc--------ccccCchHHHHHHHcCCCCCCC
Q 004989 303 ELFC---PFSTGEEKTRTMSSLRHR--------------------VLPPQ--------LLLKFPKEASFCLWLLHPEPSG 351 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~--------------------~~p~~--------~~~~~p~~~~Li~~~L~~dP~~ 351 (720)
||++ ||................ ..+.. +....+...+||.+||++||++
T Consensus 201 el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~ 280 (309)
T cd07845 201 ELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKK 280 (309)
T ss_pred HHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhh
Confidence 9999 555443332221111100 00000 0112344569999999999999
Q ss_pred CCChHHHHcCcccCCCccc
Q 004989 352 RPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 352 Rpta~eiL~hp~~~~~~~~ 370 (720)
|||+.++++||||.....+
T Consensus 281 R~t~~~il~h~~f~~~~~~ 299 (309)
T cd07845 281 RATAEEALESSYFKEKPLP 299 (309)
T ss_pred CcCHHHHhcChhhccCCCC
Confidence 9999999999999876443
No 182
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.96 E-value=5.5e-29 Score=265.80 Aligned_cols=206 Identities=17% Similarity=0.160 Sum_probs=159.4
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..+|..++..++||||+++++ ++.+.. ..|+||||..++|.+++......+++..+..++.||+.||.|||+.||+
T Consensus 62 ~~~Ei~~l~~l~h~niv~~~~-~~~~~~---~~~lv~e~~~g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~ 137 (307)
T cd06607 62 IIKEVRFLQQLRHPNTIEYKG-CYLREH---TAWLVMEYCLGSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERI 137 (307)
T ss_pred HHHHHHHHHhCCCCCEEEEEE-EEEeCC---eEEEEHHhhCCCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCce
Confidence 346777999999999999999 554443 5799999966788888855455699999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||+|+||+++.++.++|+|||.+......
T Consensus 138 H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~------------------------------------------------- 168 (307)
T cd06607 138 HRDIKAGNILLTEPGTVKLADFGSASLVSPA------------------------------------------------- 168 (307)
T ss_pred ecCCCcccEEECCCCCEEEeecCcceecCCC-------------------------------------------------
Confidence 9999999999999999999998876221000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCccccc---CCCCCccccchhhhch
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA---GAPVSCASDIYRLGVL 300 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~---~~~~s~~sDIwSLGvl 300 (720)
....|++.|+|||++. ...++.++|||||||+
T Consensus 169 ---------------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~i 203 (307)
T cd06607 169 ---------------------------------------------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT 203 (307)
T ss_pred ---------------------------------------------CCccCCccccCceeeeccCCCCCCcccchHHHHHH
Confidence 0035678899999984 3448899999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCccccccCch-HHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004989 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~-~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
+|||++ ||........ ...+.....+......++. ..+|+.+||..+|.+||++.+++.||||....
T Consensus 204 l~el~tg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 274 (307)
T cd06607 204 CIELAERKPPLFNMNAMSA-LYHIAQNDSPTLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHRFVLRER 274 (307)
T ss_pred HHHHHcCCCCCCCccHHHH-HHHHhcCCCCCCCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcChhhcccC
Confidence 999999 4544333322 2223333223222233443 45999999999999999999999999998764
No 183
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.96 E-value=2.3e-29 Score=267.56 Aligned_cols=209 Identities=15% Similarity=0.183 Sum_probs=162.1
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
...|..+++.++||||+++++ ++.... .+|+++|| .+++|.+++... .+++.++..++.||+.||.|||++|+
T Consensus 63 ~~~e~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~--~l~~~~~~~i~~~l~~al~~LH~~~i 136 (296)
T cd06655 63 IINEILVMKELKNPNIVNFLD-SFLVGD---ELFVVMEYLAGGSLTDVVTET--CMDEAQIAAVCRECLQALEFLHANQV 136 (296)
T ss_pred HHHHHHHHHhcCCCceeeeee-eEecCc---eEEEEEEecCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 346777899999999999999 454433 57999999 899999988543 38999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.++|+|||.+....... .
T Consensus 137 ~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~----------------------------------~------------ 170 (296)
T cd06655 137 IHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQ----------------------------------S------------ 170 (296)
T ss_pred ccCCCCHHHEEECCCCCEEEccCccchhccccc----------------------------------c------------
Confidence 999999999999999999999998874321100 0
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......|++.|+|||.+.+..++.++|||||||++|
T Consensus 171 --------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~ 206 (296)
T cd06655 171 --------------------------------------------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAI 206 (296)
T ss_pred --------------------------------------------cCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHH
Confidence 000135788999999998888999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004989 303 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
+|++ ||..................+....... +...+|+.+||..||.+||++.++++||||....
T Consensus 207 ~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~~~~~~~~ 276 (296)
T cd06655 207 EMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLKLAK 276 (296)
T ss_pred HHHhCCCCCCCCCHHHHHHHHHhcCCcccCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhChHhhhcc
Confidence 9999 6665544333222222221111122223 4455999999999999999999999999998753
No 184
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.96 E-value=3.1e-29 Score=268.23 Aligned_cols=222 Identities=16% Similarity=0.147 Sum_probs=161.4
Q ss_pred chhhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHH
Q 004989 60 FELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAA 137 (720)
Q Consensus 60 ~~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yL 137 (720)
..-+...|..+++.++||||+++++ ++.... .+|++||| .+++|.+++.. ....+++..+..+++||+.||.||
T Consensus 42 ~~~~~~~Ei~~l~~l~h~~i~~~~~-~~~~~~---~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~L 117 (314)
T cd08216 42 DLKLLQQEIITSRQLQHPNILPYVT-SFIVDS---ELYVVSPLMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYI 117 (314)
T ss_pred HHHHHHHHHHHHHhcCCcchhhhhh-eeecCC---eEEEEEeccCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHH
Confidence 3345567888999999999999999 444433 57999999 88999999954 334589999999999999999999
Q ss_pred HHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCC
Q 004989 138 HSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 138 Hs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~ 217 (720)
|++||+||||||+||+++.++.++++||+.+......... .....++
T Consensus 118 H~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~--------------------------~~~~~~~------- 164 (314)
T cd08216 118 HSKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKR--------------------------QRVVHDF------- 164 (314)
T ss_pred HHCCeecCCCCcceEEEecCCceEEecCccceeecccccc--------------------------ccccccc-------
Confidence 9999999999999999999999999999877432110000 0000000
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC--CCCccccch
Q 004989 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA--PVSCASDIY 295 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~--~~s~~sDIw 295 (720)
.....++..|+|||++.+. .++.++|||
T Consensus 165 --------------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~Diw 194 (314)
T cd08216 165 --------------------------------------------------PKSSVKNLPWLSPEVLQQNLQGYNEKSDIY 194 (314)
T ss_pred --------------------------------------------------cccccccccccCHHHhcCCCCCCCcchhHH
Confidence 0113568889999999764 488999999
Q ss_pred hhhchhhhccc---cCCCCchHHHHHHHhhcCC--------CCcc-----------------------cc-ccCchHHHH
Q 004989 296 RLGVLLFELFC---PFSTGEEKTRTMSSLRHRV--------LPPQ-----------------------LL-LKFPKEASF 340 (720)
Q Consensus 296 SLGvll~eLlt---pf~~~~~~~~~~~~l~~~~--------~p~~-----------------------~~-~~~p~~~~L 340 (720)
||||++|||++ ||............+.... .+.. .. ...+...+|
T Consensus 195 s~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 274 (314)
T cd08216 195 SVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQF 274 (314)
T ss_pred HHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHH
Confidence 99999999998 6655443333222222110 0000 00 001234589
Q ss_pred HHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004989 341 CLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 341 i~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
+.+||.+||++|||+.++|+||||+...
T Consensus 275 i~~~l~~~P~~Rpt~~~ll~~p~~~~~~ 302 (314)
T cd08216 275 VELCLQRDPESRPSASQLLNHSFFKQCK 302 (314)
T ss_pred HHHHhhcCCCcCcCHHHHhcCchHhhhc
Confidence 9999999999999999999999998764
No 185
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=99.96 E-value=2.6e-29 Score=261.79 Aligned_cols=212 Identities=16% Similarity=0.235 Sum_probs=160.5
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|++++||||+++++ ++.+.. .++++||| .|++|.+++.+. .++++..++.++.||+.||.|||++|
T Consensus 49 ~~~~e~~~l~~l~h~~iv~~~~-~~~~~~---~~~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~al~~LH~~~ 123 (268)
T cd06630 49 ALRKEIRLMARLNHPHIIRMLG-ATCEDS---HFNLFVEWMAGGSVSHLLSKY-GAFKEAVIINYTEQLLRGLSYLHENQ 123 (268)
T ss_pred HHHHHHHHHHHcCCCceehhhc-eeccCC---eEEEEEeccCCCcHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3447888999999999999999 444443 57999999 999999999554 35899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCC-ceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 142 IVVHNVRPSCFVMSSFN-HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~-~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
++|+||||+||+++.++ .++|+|||.+.......... .+
T Consensus 124 i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~~~-----------------------------~~----------- 163 (268)
T cd06630 124 IIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTGA-----------------------------GE----------- 163 (268)
T ss_pred eecCCCCHHHEEEcCCCCEEEEcccccccccccccccC-----------------------------Cc-----------
Confidence 99999999999998776 58999998874332110000 00
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhch
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
......|+..|+|||.+.+..++.++|||||||+
T Consensus 164 ----------------------------------------------~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~ 197 (268)
T cd06630 164 ----------------------------------------------FQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCV 197 (268)
T ss_pred ----------------------------------------------cccccccccceeCHhHhccCCCCcccchHHHHHH
Confidence 0011357889999999988889999999999999
Q ss_pred hhhccc---cCCCCch--HHHHHHHhhcCCCCcccccc-CchHHHHHHHcCCCCCCCCCChHHHHcCcccC
Q 004989 301 LFELFC---PFSTGEE--KTRTMSSLRHRVLPPQLLLK-FPKEASFCLWLLHPEPSGRPKMGELLQSEFLN 365 (720)
Q Consensus 301 l~eLlt---pf~~~~~--~~~~~~~l~~~~~p~~~~~~-~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~ 365 (720)
+|+|++ ||..... .......+.....++.+... .+...+|+.+||..+|.+||++.++++||||.
T Consensus 198 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~~~~~ 268 (268)
T cd06630 198 IIEMATAKPPWNAEKHSNHLALIFKIASATTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKHPVFR 268 (268)
T ss_pred HHHHHhCCCCCCCCCCcchHHHHHHHhccCCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcCcccC
Confidence 999999 5543221 12222222222223333333 34556999999999999999999999999985
No 186
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=99.96 E-value=2.7e-29 Score=262.28 Aligned_cols=208 Identities=19% Similarity=0.216 Sum_probs=155.5
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCC--CHHHHHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSV--DVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l--~~~~~~~i~~QIl~aL~yLHs 139 (720)
+..+|..++.+++||||+++++ ++..+ ..+++++|| .+++|.+++......+ ++..+..++.||+.||.|||+
T Consensus 51 ~~~~e~~~l~~l~h~~iv~~~~-~~~~~---~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~ 126 (268)
T cd06624 51 PLHEEIALHSYLKHRNIVQYLG-SDSEN---GFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHD 126 (268)
T ss_pred HHHHHHHHHHhcCCCCeeeeee-eeccC---CEEEEEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 3447778999999999999999 44443 368999999 8999999996544445 889999999999999999999
Q ss_pred CCceeccCCCCcEEEcc-CCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCC
Q 004989 140 QGIVVHNVRPSCFVMSS-FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~-~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
+||+||||||+||+++. .+.++|+|||.+........
T Consensus 127 ~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~------------------------------------------ 164 (268)
T cd06624 127 NQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINP------------------------------------------ 164 (268)
T ss_pred CCEeecCCCHHHEEEcCCCCeEEEecchhheecccCCC------------------------------------------
Confidence 99999999999999975 67899999887733211000
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC--CCccccchh
Q 004989 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP--VSCASDIYR 296 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~--~s~~sDIwS 296 (720)
......|++.|+|||.+.+.. ++.++||||
T Consensus 165 ------------------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~s 196 (268)
T cd06624 165 ------------------------------------------------CTETFTGTLQYMAPEVIDKGPRGYGAPADIWS 196 (268)
T ss_pred ------------------------------------------------ccccCCCCccccChhhhccccccCCchhhhHH
Confidence 000124688999999986654 789999999
Q ss_pred hhchhhhccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004989 297 LGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 297 LGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
|||++|+|++ ||.........+.........+.++... +...+|+.+||+++|.+|||+.|++.||||
T Consensus 197 lGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 268 (268)
T cd06624 197 LGCTIVEMATGKPPFIELGEPQAAMFKVGMFKIHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQDPFL 268 (268)
T ss_pred HHHHHHHHHhCCCCCccccChhhhHhhhhhhccCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhCCCC
Confidence 9999999999 5543322212221111111122222223 345699999999999999999999999997
No 187
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.96 E-value=1.2e-29 Score=276.36 Aligned_cols=208 Identities=22% Similarity=0.224 Sum_probs=166.9
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..++..++|||||++|. +.+... .+|+|||| .+|.|+++|.+.++ +.+.+++.+|.|++.||+|||+++||
T Consensus 103 ~rev~imk~l~HPnIvkl~~-v~~t~~---~lylV~eya~~ge~~~yl~~~gr-~~e~~ar~~F~q~vsaveYcH~k~iv 177 (596)
T KOG0586|consen 103 GREVDIMKSLNHPNIVKLFS-VIETEA---TLYLVMEYASGGELFDYLVKHGR-MKEKEARAKFRQIVSAVEYCHSKNIV 177 (596)
T ss_pred HHHHHHHHhcCCcceeeeee-eeeecc---eeEEEEEeccCchhHHHHHhccc-chhhhhhhhhHHHHHHHHHHhhccee
Confidence 38999999999999999999 666554 57999999 99999999977776 77799999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
|||||.+||||+.+.++||+|||++..+.....
T Consensus 178 HrdLk~eNilL~~~mnikIaDfgfS~~~~~~~~----------------------------------------------- 210 (596)
T KOG0586|consen 178 HRDLKAENILLDENMNIKIADFGFSTFFDYGLM----------------------------------------------- 210 (596)
T ss_pred ccccchhhcccccccceeeeccccceeeccccc-----------------------------------------------
Confidence 999999999999999999999988743311100
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCC-Cccccchhhhchhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYRLGVLLF 302 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~-s~~sDIwSLGvll~ 302 (720)
....+|++.|.|||++.+..| ++.+|+||||++||
T Consensus 211 --------------------------------------------lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly 246 (596)
T KOG0586|consen 211 --------------------------------------------LQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLY 246 (596)
T ss_pred --------------------------------------------ccccCCCCCccChHhhcCcccCCcceehhhhhhhhe
Confidence 011589999999999999985 78999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCccc
Q 004989 303 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
-|++ ||++..-..---..++....-|.+ ...+..++|.++|.++|.+|+++++++.|.|+......
T Consensus 247 ~LV~GsLPFDG~~lk~Lr~rvl~gk~rIp~~--ms~dce~lLrk~lvl~Pskr~~~dqim~~~W~n~~~~~ 315 (596)
T KOG0586|consen 247 ALVEGSLPFDGQNLKELRPRVLRGKYRIPFY--MSCDCEDLLRKFLVLNPSKRGPCDQIMKDRWRNDLLEA 315 (596)
T ss_pred eeeecccccCCcccccccchheeeeecccce--eechhHHHHHHhhccCccccCCHHHhhhhcccchhhhh
Confidence 9999 888754332111222221111211 12334589999999999999999999999999877443
No 188
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=99.96 E-value=4.2e-29 Score=258.67 Aligned_cols=207 Identities=19% Similarity=0.250 Sum_probs=164.1
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+..+|..+|++++||||+++++ ++.... ..+++||| .+++|.+++.+. ...+++..+..++.|++.||.|||+.
T Consensus 45 ~~~~e~~~l~~~~h~~i~~~~~-~~~~~~---~~~~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~ 120 (256)
T cd08221 45 DALNEIVILSLLQHPNIIAYYN-HFMDDN---TLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKA 120 (256)
T ss_pred HHHHHHHHHHhCCCCCeeEEEe-EEecCC---eEEEEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 4457788999999999999999 444432 57999999 899999999543 45589999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
|++|+||+|+||+++.++.+|++|||.+........
T Consensus 121 ~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~-------------------------------------------- 156 (256)
T cd08221 121 GILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYS-------------------------------------------- 156 (256)
T ss_pred CccccCCChHhEEEeCCCCEEECcCcceEEcccccc--------------------------------------------
Confidence 999999999999999999999999887733211100
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhch
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
......|++.|+|||.+.+..++.++|||||||+
T Consensus 157 ----------------------------------------------~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i 190 (256)
T cd08221 157 ----------------------------------------------MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCV 190 (256)
T ss_pred ----------------------------------------------cccccCCCccccCHhhcCCCCCCCcchhHHHHHH
Confidence 0001357899999999988888999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004989 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
+|||++ ||...... .....+..+.+++.......+..+|+.+||.++|.+||++.++|+|||+
T Consensus 191 ~~~l~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~~l 256 (256)
T cd08221 191 LYELLTLKRTFDATNPL-NLVVKIVQGNYTPVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQPLL 256 (256)
T ss_pred HHHHHHCCCCCCCCCHH-HHHHHHHcCCCCCCccccCHHHHHHHHHHcccCcccCCCHHHHhhCcCC
Confidence 999999 55544333 3444444444444433334455699999999999999999999999986
No 189
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.96 E-value=8.4e-29 Score=264.69 Aligned_cols=209 Identities=16% Similarity=0.150 Sum_probs=161.1
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
+...|..+++.++||||+++++ ++.... ..++||||..++|.+++......+++..+..++.||+.||.|||+.|+
T Consensus 61 ~~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i 136 (308)
T cd06634 61 DIIKEVRFLQKLRHPNTIQYRG-CYLREH---TAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNM 136 (308)
T ss_pred HHHHHHHHHHhCCCCCcccEEE-EEEcCC---eeEEEEEccCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 3446788999999999999999 444432 579999996678988885555568999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.++++|||.+......
T Consensus 137 ~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~------------------------------------------------ 168 (308)
T cd06634 137 IHRDVKAGNILLSEPGLVKLGDFGSASIMAPA------------------------------------------------ 168 (308)
T ss_pred ccCCCCHHhEEECCCCcEEECCcccceeecCc------------------------------------------------
Confidence 99999999999999999999888876221000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC---CCCCccccchhhhc
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG---APVSCASDIYRLGV 299 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~---~~~s~~sDIwSLGv 299 (720)
....|++.|+|||.+.+ ..++.++|||||||
T Consensus 169 ----------------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~ 202 (308)
T cd06634 169 ----------------------------------------------NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGI 202 (308)
T ss_pred ----------------------------------------------ccccCCccccCHHHHhhcccCCCCcccchHHHHH
Confidence 01356889999999853 44788999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCCccc
Q 004989 300 LLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
++|+|++ ||....... ....+.....+......++ ...+||.+||.++|.+||++.+++.|||+.....+
T Consensus 203 il~el~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~~~~~ 276 (308)
T cd06634 203 TCIELAERKPPLFNMNAMS-ALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERPP 276 (308)
T ss_pred HHHHHHcCCCCCccccHHH-HHHHHhhcCCCCcCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCccccccCCh
Confidence 9999998 554443332 2223333333333233344 34599999999999999999999999999986443
No 190
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.96 E-value=1.6e-29 Score=268.87 Aligned_cols=210 Identities=14% Similarity=0.179 Sum_probs=161.5
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
...|..+++.++||||+++++ .+..+. .+|+|||| .+++|.+++.+. .+++..+..++.|++.||.|||+.||
T Consensus 63 ~~~e~~~l~~~~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~l~~~L~~LH~~~i 136 (297)
T cd06656 63 IINEILVMRENKNPNIVNYLD-SYLVGD---ELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALDFLHSNQV 136 (297)
T ss_pred HHHHHHHHHhCCCCCEeeEEE-EEecCC---EEEEeecccCCCCHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 346777899999999999999 444433 57999999 899999998543 38999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.++|+|||.+........
T Consensus 137 ~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~---------------------------------------------- 170 (297)
T cd06656 137 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS---------------------------------------------- 170 (297)
T ss_pred ccCCCCHHHEEECCCCCEEECcCccceEccCCcc----------------------------------------------
Confidence 9999999999999999999999987732211000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......|++.|+|||.+.+..++.++|||||||++|
T Consensus 171 --------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~ 206 (297)
T cd06656 171 --------------------------------------------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAI 206 (297)
T ss_pred --------------------------------------------CcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHH
Confidence 000135788999999998888999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004989 303 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
+|++ ||..................+.......+ ...+|+.+||..+|.+||++.++++||||.....
T Consensus 207 ~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~ 277 (297)
T cd06656 207 EMVEGEPPYLNENPLRALYLIATNGTPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFLKLAKP 277 (297)
T ss_pred HHHhCCCCCCCCCcchheeeeccCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhccccc
Confidence 9999 56544332222222211211212222333 3459999999999999999999999999987643
No 191
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=99.96 E-value=2.5e-29 Score=276.34 Aligned_cols=204 Identities=18% Similarity=0.198 Sum_probs=153.4
Q ss_pred chhhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC---------------------------
Q 004989 64 KHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP--------------------------- 114 (720)
Q Consensus 64 ~~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~--------------------------- 114 (720)
..+|..+|+.+ +|||||++++ .+.... .+|++||| .+++|.+++...
T Consensus 88 ~~~E~~il~~l~~h~nIv~~~~-~~~~~~---~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (374)
T cd05106 88 LMSELKILSHLGQHKNIVNLLG-ACTHGG---PVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLE 163 (374)
T ss_pred HHHHHHHHHhhccCCceeeEee-EecCCC---CeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchh
Confidence 33677889888 8999999999 444433 57999999 999999998432
Q ss_pred ------------------------------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcE
Q 004989 115 ------------------------------------------KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCF 152 (720)
Q Consensus 115 ------------------------------------------~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NI 152 (720)
..++++.+++.|+.||+.||.|||++||+||||||+||
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Ni 243 (374)
T cd05106 164 KKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNV 243 (374)
T ss_pred cccccccccccccccccccccCCccccccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheE
Confidence 12478889999999999999999999999999999999
Q ss_pred EEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCCCcc
Q 004989 153 VMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAY 232 (720)
Q Consensus 153 Ll~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~ 232 (720)
|++.++.++|+|||++....... .+
T Consensus 244 l~~~~~~~kL~DfGla~~~~~~~---------------------------------~~---------------------- 268 (374)
T cd05106 244 LLTDGRVAKICDFGLARDIMNDS---------------------------------NY---------------------- 268 (374)
T ss_pred EEeCCCeEEEeeceeeeeccCCc---------------------------------ce----------------------
Confidence 99999999999999874321110 00
Q ss_pred ccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhccc----cC
Q 004989 233 GTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC----PF 308 (720)
Q Consensus 233 ~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt----pf 308 (720)
. ......+++.|+|||++.+..++.++|||||||++|||++ ||
T Consensus 269 --------------------------------~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf 315 (374)
T cd05106 269 --------------------------------V-VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPY 315 (374)
T ss_pred --------------------------------e-eccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCC
Confidence 0 0000234677999999988889999999999999999986 66
Q ss_pred CCCchHHHHHHHhhcCCCCccccc-cCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 309 STGEEKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 309 ~~~~~~~~~~~~l~~~~~p~~~~~-~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
............+.... .+..+. ..+...+++.+||+.||.+|||+.++++
T Consensus 316 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~ 367 (374)
T cd05106 316 PGILVNSKFYKMVKRGY-QMSRPDFAPPEIYSIMKMCWNLEPTERPTFSQISQ 367 (374)
T ss_pred ccccccHHHHHHHHccc-CccCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 55433323333333222 222222 2355569999999999999999999976
No 192
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.96 E-value=1.7e-28 Score=263.38 Aligned_cols=207 Identities=16% Similarity=0.171 Sum_probs=160.1
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
+...|..+++.++||||+++++ ++..+. ..|++|||..++|.+++......+++..+..++.||+.||.|||++||
T Consensus 71 ~~~~e~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i 146 (317)
T cd06635 71 DIIKEVKFLQRIKHPNSIEYKG-CYLREH---TAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNM 146 (317)
T ss_pred HHHHHHHHHHhCCCCCEEEEEE-EEeeCC---eEEEEEeCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 3446788999999999999999 554443 579999996678988885555669999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||+|+||+++.++.++|+|||.+......
T Consensus 147 ~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~------------------------------------------------ 178 (317)
T cd06635 147 IHRDIKAGNILLTEPGQVKLADFGSASIASPA------------------------------------------------ 178 (317)
T ss_pred ccCCCCcccEEECCCCCEEEecCCCccccCCc------------------------------------------------
Confidence 99999999999999999999998876221000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCccccc---CCCCCccccchhhhc
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA---GAPVSCASDIYRLGV 299 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~---~~~~s~~sDIwSLGv 299 (720)
....|++.|+|||.+. ...++.++|||||||
T Consensus 179 ----------------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGv 212 (317)
T cd06635 179 ----------------------------------------------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGI 212 (317)
T ss_pred ----------------------------------------------ccccCCccccChhhhhcCCCCCCCccccHHHHHH
Confidence 0135688999999984 345899999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004989 300 LLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
++|||++ ||........ ...+.....++.....++ ...+|+.+||+.+|.+||++.++++|+|+....
T Consensus 213 il~el~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~ 284 (317)
T cd06635 213 TCIELAERKPPLFNMNAMSA-LYHIAQNESPTLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLRER 284 (317)
T ss_pred HHHHHHhCCCCCCCccHHHH-HHHHHhccCCCCCCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhccC
Confidence 9999999 5544433322 223333323332233333 445999999999999999999999999987653
No 193
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.96 E-value=5.6e-29 Score=265.11 Aligned_cols=222 Identities=15% Similarity=0.158 Sum_probs=158.9
Q ss_pred chhhhhhcccCCCCCceecccceeecCC----CCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEA----AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~----~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
..+|..++..++||||+++++.++.... ....++++|||.+.+|..++......+++..++.++.||+.||.|||+
T Consensus 54 ~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~lv~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~ 133 (311)
T cd07866 54 ALREIKILKKLKHPNVVPLIDMAVERPDKSKRKRGSVYMVTPYMDHDLSGLLENPSVKLTESQIKCYMLQLLEGINYLHE 133 (311)
T ss_pred HHHHHHHHHhcCCCCccchhhheecccccccccCceEEEEEecCCcCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHh
Confidence 3467778999999999999995544332 133579999997778998886655569999999999999999999999
Q ss_pred CCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCC
Q 004989 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||+|+||||+||+++.++.++|+|||++.......... ..+
T Consensus 134 ~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~------------------------------~~~-------- 175 (311)
T cd07866 134 NHILHRDIKAANILIDNQGILKIADFGLARPYDGPPPNP------------------------------KGG-------- 175 (311)
T ss_pred CCeecCCCCHHHEEECCCCCEEECcCccchhccCCCccc------------------------------ccC--------
Confidence 999999999999999999999999999885432210000 000
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC-CCCccccchhhh
Q 004989 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLG 298 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLG 298 (720)
........+...|++.|+|||.+.+. .++.++||||||
T Consensus 176 -----------------------------------------~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG 214 (311)
T cd07866 176 -----------------------------------------GGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIG 214 (311)
T ss_pred -----------------------------------------CcccccccccceeccCcCChHHhhCCCccCchhHhHHHH
Confidence 00000011224679999999998765 489999999999
Q ss_pred chhhhccc---cCCCCchHHHHHHHhh--cCC----------------------CCcc----ccccCchHHHHHHHcCCC
Q 004989 299 VLLFELFC---PFSTGEEKTRTMSSLR--HRV----------------------LPPQ----LLLKFPKEASFCLWLLHP 347 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~--~~~----------------------~p~~----~~~~~p~~~~Li~~~L~~ 347 (720)
|++|||++ ||.............. ... .++. +....+...+|+.+||..
T Consensus 215 ~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 294 (311)
T cd07866 215 CVFAEMFTRRPILQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSL 294 (311)
T ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHccc
Confidence 99999999 4443332211111110 000 0111 111224456999999999
Q ss_pred CCCCCCChHHHHcCccc
Q 004989 348 EPSGRPKMGELLQSEFL 364 (720)
Q Consensus 348 dP~~Rpta~eiL~hp~~ 364 (720)
||.+|||+.|++.||||
T Consensus 295 ~p~~R~t~~ell~~~~f 311 (311)
T cd07866 295 DPYKRLTASDALEHPYF 311 (311)
T ss_pred CcccCcCHHHHhcCCCC
Confidence 99999999999999998
No 194
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=99.96 E-value=4e-29 Score=259.30 Aligned_cols=204 Identities=18% Similarity=0.231 Sum_probs=157.5
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..++++++||||+++++ .+.... .+|++||| .+++|.+++......+++.+++.++.||+.||.|||++||+
T Consensus 48 ~~e~~~l~~~~h~~i~~~~~-~~~~~~---~~~l~~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~ 123 (262)
T cd06613 48 QQEISMLKECRHPNIVAYFG-SYLRRD---KLWIVMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKI 123 (262)
T ss_pred HHHHHHHHhCCCCChhceEE-EEEeCC---EEEEEEeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCce
Confidence 36777999999999999999 444433 58999999 88999999966545699999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
|+||||+||+++.++.++|+|||.+........
T Consensus 124 h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~----------------------------------------------- 156 (262)
T cd06613 124 HRDIKGANILLTEDGDVKLADFGVSAQLTATIA----------------------------------------------- 156 (262)
T ss_pred ecCCChhhEEECCCCCEEECccccchhhhhhhh-----------------------------------------------
Confidence 999999999999999999999887732210000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC---CCCccccchhhhch
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA---PVSCASDIYRLGVL 300 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~---~~s~~sDIwSLGvl 300 (720)
......++..|+|||.+.+. .++.++|||||||+
T Consensus 157 -------------------------------------------~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~ 193 (262)
T cd06613 157 -------------------------------------------KRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGIT 193 (262)
T ss_pred -------------------------------------------ccccccCCccccCchhhcccccCCcCchhhhHHHHHH
Confidence 00013578899999999776 78999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCc-cc--cccC-chHHHHHHHcCCCCCCCCCChHHHHcCcc
Q 004989 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPP-QL--LLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEF 363 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~-~~--~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~hp~ 363 (720)
+|||++ ||......... ..+....+++ .+ ...+ +...+|+.+||..+|..|||+.+++.|+|
T Consensus 194 l~~~~tg~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~ 262 (262)
T cd06613 194 AIELAELQPPMFDLHPMRAL-FLISKSNFPPPKLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQHPF 262 (262)
T ss_pred HHHHHhCCCCCCCCCHHHHH-HHHHhccCCCccccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcCCC
Confidence 999999 55544333222 2222222222 11 1122 33459999999999999999999999998
No 195
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=99.96 E-value=5.9e-29 Score=263.09 Aligned_cols=208 Identities=18% Similarity=0.251 Sum_probs=155.1
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
+..+|..+|..++||||+++++ ++..+. ..|++|||.+++|.+++......+++..++.++.||+.||.|||+.||
T Consensus 49 ~~~~e~~~l~~l~h~ni~~~~~-~~~~~~---~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i 124 (291)
T cd07870 49 TAIREASLLKGLKHANIVLLHD-IIHTKE---TLTFVFEYMHTDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHI 124 (291)
T ss_pred HHHHHHHHHHhcCCCCEeEEEE-EEecCC---eEEEEEecccCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 3346778899999999999999 454443 579999996688988885544558899999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+|+||||+||+++.++.++|+|||.+........
T Consensus 125 ~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~---------------------------------------------- 158 (291)
T cd07870 125 LHRDLKPQNLLISYLGELKLADFGLARAKSIPSQ---------------------------------------------- 158 (291)
T ss_pred ccCCCChHHEEEcCCCcEEEeccccccccCCCCC----------------------------------------------
Confidence 9999999999999999999999988743211100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC-CCCccccchhhhchh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLL 301 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGvll 301 (720)
......+++.|+|||.+.+. .++.++|||||||++
T Consensus 159 --------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l 194 (291)
T cd07870 159 --------------------------------------------TYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIF 194 (291)
T ss_pred --------------------------------------------CCCCccccccccCCceeecCCCCCcHHHHHHHHHHH
Confidence 00012468899999998764 378899999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhc--C-----------------------CCCccc------cccCchHHHHHHHcCCC
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRH--R-----------------------VLPPQL------LLKFPKEASFCLWLLHP 347 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~--~-----------------------~~p~~~------~~~~p~~~~Li~~~L~~ 347 (720)
|||++ ||............+.. + ..+..+ ....+...+|+.+||..
T Consensus 195 ~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~ 274 (291)
T cd07870 195 IEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMM 274 (291)
T ss_pred HHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCc
Confidence 99999 56543332222211110 0 000000 01123445999999999
Q ss_pred CCCCCCChHHHHcCccc
Q 004989 348 EPSGRPKMGELLQSEFL 364 (720)
Q Consensus 348 dP~~Rpta~eiL~hp~~ 364 (720)
||.+|||+.|++.||||
T Consensus 275 dp~~R~t~~~~l~h~~~ 291 (291)
T cd07870 275 FPKDRISAQDALLHPYF 291 (291)
T ss_pred CcccCcCHHHHhcCCCC
Confidence 99999999999999997
No 196
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=99.96 E-value=4.2e-29 Score=258.35 Aligned_cols=206 Identities=21% Similarity=0.195 Sum_probs=160.1
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+++.++||||+++++ ++..+. .+|++||| .+++|.+++.+.. .+++..++.++.||+.||.|||+.|
T Consensus 48 ~~~~e~~~l~~~~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~ 122 (258)
T cd06632 48 QLEQEIALLSKLQHPNIVQYLG-TEREED---NLYIFLELVPGGSLAKLLKKYG-SFPEPVIRLYTRQILLGLEYLHDRN 122 (258)
T ss_pred HHHHHHHHHHhcCCCCchheee-eEecCC---eEEEEEEecCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 4457888999999999999999 444443 57999999 8899999995543 4899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+|+||+|+||+++.++.+||+|||.+.......
T Consensus 123 i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~---------------------------------------------- 156 (258)
T cd06632 123 TVHRDIKGANILVDTNGVVKLADFGMAKQVVEFS---------------------------------------------- 156 (258)
T ss_pred cccCCCCHHHEEECCCCCEEEccCccceeccccc----------------------------------------------
Confidence 9999999999999999999999988763221100
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC-CCccccchhhhch
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVL 300 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGvl 300 (720)
......|++.|+|||.+.... ++.++|+|||||+
T Consensus 157 ---------------------------------------------~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~ 191 (258)
T cd06632 157 ---------------------------------------------FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCT 191 (258)
T ss_pred ---------------------------------------------cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHH
Confidence 000135788999999997776 8999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004989 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
+|+|++ ||..................+.......+...+|+.+||+.+|.+||++.+++.|||+
T Consensus 192 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~ 258 (258)
T cd06632 192 VLEMATGKPPWSQLEGVAAVFKIGRSKELPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLEHPFV 258 (258)
T ss_pred HHHHHhCCCCcccCcHHHHHHHHHhcccCCCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcCCCC
Confidence 999999 6655443322222222122222222233455699999999999999999999999996
No 197
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=99.96 E-value=3.1e-29 Score=266.70 Aligned_cols=209 Identities=18% Similarity=0.285 Sum_probs=161.8
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++..++||||+++++ ++..+. ..|++||| .+++|.+++.. ..+++..++.++.||+.||.|||++||
T Consensus 65 ~~~e~~~l~~l~hp~i~~~~~-~~~~~~---~~~iv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~~i 138 (297)
T cd06659 65 LFNEVVIMRDYQHQNVVEMYK-SYLVGE---ELWVLMEFLQGGALTDIVSQ--TRLNEEQIATVCESVLQALCYLHSQGV 138 (297)
T ss_pred HHHHHHHHHhCCCCchhhhhh-heeeCC---eEEEEEecCCCCCHHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 346778899999999999999 444443 57999999 88999998744 248999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.++|+|||.+........
T Consensus 139 vH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~---------------------------------------------- 172 (297)
T cd06659 139 IHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVP---------------------------------------------- 172 (297)
T ss_pred ecCCCCHHHeEEccCCcEEEeechhHhhcccccc----------------------------------------------
Confidence 9999999999999999999999988732211100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......|+..|+|||++.+..++.++|||||||++|
T Consensus 173 --------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ 208 (297)
T cd06659 173 --------------------------------------------KRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVI 208 (297)
T ss_pred --------------------------------------------cccceecCccccCHHHHccCCCCchhhHHHHHHHHH
Confidence 000135789999999998888999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCCCc-ccc-ccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004989 303 ELFC---PFSTGEEKTRTMSSLRHRVLPP-QLL-LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~~p~-~~~-~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
||++ ||...... ..+..+.....+. ... ...+...+|+.+||+.+|.+||++.++++||||.+...
T Consensus 209 el~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~~~~~~~~~ 279 (297)
T cd06659 209 EMVDGEPPYFSDSPV-QAMKRLRDSPPPKLKNAHKISPVLRDFLERMLTREPQERATAQELLDHPFLLQTGL 279 (297)
T ss_pred HHHhCCCCCCCCCHH-HHHHHHhccCCCCccccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhChhhccCCC
Confidence 9999 55544332 2333333222111 111 22334569999999999999999999999999987743
No 198
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.96 E-value=2.3e-29 Score=246.29 Aligned_cols=225 Identities=15% Similarity=0.202 Sum_probs=167.6
Q ss_pred chhhchhhhhhcccCCCCCceecccceeecCC----CCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHH
Q 004989 60 FELRKHSDGVELTHGDHLRNQGGLSGVCENEA----AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVY 135 (720)
Q Consensus 60 ~~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~----~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~ 135 (720)
...-..+|..+|..+.|+|++.+++++-.... ....+|+||.++..+|.-+|......++..++..++.+++.||.
T Consensus 59 fpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t~ylVf~~cehDLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~ 138 (376)
T KOG0669|consen 59 FPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRATFYLVFDFCEHDLAGLLSNRKVRFSLSEIKKVMKGLMNGLY 138 (376)
T ss_pred CcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccceeeeeHHHhhhhHHHHhcCccccccHHHHHHHHHHHHHHHH
Confidence 33345588889999999999999983332111 22248999999999999999666566999999999999999999
Q ss_pred HHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccC
Q 004989 136 AAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 215 (720)
Q Consensus 136 yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~ 215 (720)
|+|...|+|||+||+|+||+.+|.+||+|||+++.+....-.
T Consensus 139 ~iHr~kilHRDmKaaNvLIt~dgilklADFGlar~fs~~~n~-------------------------------------- 180 (376)
T KOG0669|consen 139 YIHRNKILHRDMKAANVLITKDGILKLADFGLARAFSTSKNV-------------------------------------- 180 (376)
T ss_pred HHHHhhHHhhcccHhhEEEcCCceEEeeccccccceeccccc--------------------------------------
Confidence 999999999999999999999999999888887543211000
Q ss_pred CCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC-CCccccc
Q 004989 216 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDI 294 (720)
Q Consensus 216 ~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDI 294 (720)
.+.+-+..+-|.||++||.+.|.. |+++.||
T Consensus 181 ------------------------------------------------~kprytnrvvTLwYrppEllLG~r~yg~~iDi 212 (376)
T KOG0669|consen 181 ------------------------------------------------VKPRYTNRVVTLWYRPPELLLGDREYGPPIDI 212 (376)
T ss_pred ------------------------------------------------CCCCcccceeeeecCCHHHhhcccccCCcchh
Confidence 000112246799999999999877 9999999
Q ss_pred hhhhchhhhccc--cCCCCchHHHHH---HHhhcCCCCcccc-------------------------------ccCchHH
Q 004989 295 YRLGVLLFELFC--PFSTGEEKTRTM---SSLRHRVLPPQLL-------------------------------LKFPKEA 338 (720)
Q Consensus 295 wSLGvll~eLlt--pf~~~~~~~~~~---~~l~~~~~p~~~~-------------------------------~~~p~~~ 338 (720)
|+.|||+.||++ |....+.....+ ..+...+-+..++ ...+..+
T Consensus 213 WgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~ 292 (376)
T KOG0669|consen 213 WGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEAL 292 (376)
T ss_pred HhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHH
Confidence 999999999999 544333322222 2222221111110 0112446
Q ss_pred HHHHHcCCCCCCCCCChHHHHcCcccCCCccc
Q 004989 339 SFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 339 ~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
+|+..||..||.+|+.+.++|+|.||....-+
T Consensus 293 dLle~ll~~DP~kR~~ad~alnh~~F~kdp~p 324 (376)
T KOG0669|consen 293 DLLEKLLKLDPTKRIDADQALNHDFFWKDPMP 324 (376)
T ss_pred HHHHHHhccCcccCcchHhhhchhhhhcCCcc
Confidence 99999999999999999999999999886444
No 199
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=99.96 E-value=3.3e-29 Score=267.71 Aligned_cols=211 Identities=19% Similarity=0.202 Sum_probs=153.5
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhC----CCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK----PKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~----~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
.+|..++..++||||+++++ ++.+.. ...+|+||||.+++|.+++.. ....+++..++.++.||+.||.|||+.
T Consensus 50 ~~e~~~l~~l~h~~i~~~~~-~~~~~~-~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~ 127 (316)
T cd07842 50 CREIALLRELKHENVVSLVE-VFLEHA-DKSVYLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSN 127 (316)
T ss_pred HHHHHHHHhcCCCCccceEE-EEeCCC-CceEEEEEeCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhC
Confidence 46778999999999999999 554432 236899999977789888732 123589999999999999999999999
Q ss_pred CceeccCCCCcEEEcc----CCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCC
Q 004989 141 GIVVHNVRPSCFVMSS----FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 216 (720)
Q Consensus 141 gIvHrDLKP~NILl~~----~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~ 216 (720)
||+||||||+||+++. ++.+||+|||++.........
T Consensus 128 ~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~~~~~~~~--------------------------------------- 168 (316)
T cd07842 128 WVLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAPLKP--------------------------------------- 168 (316)
T ss_pred CEeeCCCCHHHEEEcCCCCccceEEECCCccccccCCCccc---------------------------------------
Confidence 9999999999999998 899999999887432111000
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC-CCCccccch
Q 004989 217 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIY 295 (720)
Q Consensus 217 ~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIw 295 (720)
........++++|+|||++.+. .++.++|||
T Consensus 169 ------------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~ 200 (316)
T cd07842 169 ------------------------------------------------LADLDPVVVTIWYRAPELLLGARHYTKAIDIW 200 (316)
T ss_pred ------------------------------------------------ccccCCccccccccCHHHHhCCCCCCcHHHHH
Confidence 0000113678999999998765 489999999
Q ss_pred hhhchhhhccc---cCCCCchHH------------HHHHHhh------------------------cCCCC-cccc----
Q 004989 296 RLGVLLFELFC---PFSTGEEKT------------RTMSSLR------------------------HRVLP-PQLL---- 331 (720)
Q Consensus 296 SLGvll~eLlt---pf~~~~~~~------------~~~~~l~------------------------~~~~p-~~~~---- 331 (720)
||||++|+|++ ||....... .....+. ....+ ..+.
T Consensus 201 slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (316)
T cd07842 201 AIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWME 280 (316)
T ss_pred HHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHH
Confidence 99999999999 554322110 0000000 00011 0000
Q ss_pred ---ccCchHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004989 332 ---LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 332 ---~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
...+...+++.+||++||++|||+.|+++||||
T Consensus 281 ~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~~~f 316 (316)
T cd07842 281 KHKKPDSQGFDLLRKLLEYDPTKRITAEEALEHPYF 316 (316)
T ss_pred hccCCCHHHHHHHHHHhcCCcccCcCHHHHhcCCCC
Confidence 122345599999999999999999999999998
No 200
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.96 E-value=2.7e-29 Score=260.59 Aligned_cols=204 Identities=17% Similarity=0.176 Sum_probs=160.6
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++++++||||+++++ .+..+. .+|+++|| .|++|.+++... .++++..+..++.||+.||.|||++|
T Consensus 46 ~~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~i~~~l~~lh~~~ 120 (258)
T cd05578 46 NVLNERRILQELNHPFLVNLWY-SFQDEE---NMYLVVDLLLGGDLRYHLSQK-VKFSEEQVKFWICEIVLALEYLHSKG 120 (258)
T ss_pred HHHHHHHHHHhCCCCChHHHHH-hhcCCC---eEEEEEeCCCCCCHHHHHHhc-CCcCHHHHHHHHHHHHHHHHHHHhCC
Confidence 4457778999999999999999 444433 68999999 899999999654 45999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
++|+||+|+||+++.++.++|+|||.+.......
T Consensus 121 i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~---------------------------------------------- 154 (258)
T cd05578 121 IIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT---------------------------------------------- 154 (258)
T ss_pred eeccCCCHHHeEEcCCCCEEEeecccccccCCCc----------------------------------------------
Confidence 9999999999999999999999998774321110
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......|+..|+|||.+.+..++.++|+|||||++
T Consensus 155 ---------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l 189 (258)
T cd05578 155 ---------------------------------------------LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTA 189 (258)
T ss_pred ---------------------------------------------cccccCCChhhcCHHHHcccCCCCcccchhhHHHH
Confidence 00013568889999999888899999999999999
Q ss_pred hhccc---cCCCCch--HHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCCh--HHHHcCccc
Q 004989 302 FELFC---PFSTGEE--KTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKM--GELLQSEFL 364 (720)
Q Consensus 302 ~eLlt---pf~~~~~--~~~~~~~l~~~~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta--~eiL~hp~~ 364 (720)
|+|++ ||..... .......... ..+..+..+| ...+++.+||..||.+||++ .|+++||||
T Consensus 190 ~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~~~~~ 258 (258)
T cd05578 190 YECLRGKRPYRGHSRTIRDQIRAKQET--ADVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLKNHPYF 258 (258)
T ss_pred HHHHhCCCCCCCCCccHHHHHHHHhcc--ccccCcccCcHHHHHHHHHHccCChhHcCCccHHHHhcCCCC
Confidence 99998 5554432 2223322221 2222223344 45599999999999999999 999999997
No 201
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=99.96 E-value=6.3e-29 Score=265.10 Aligned_cols=222 Identities=15% Similarity=0.169 Sum_probs=162.2
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..|..++..++||||+++++ .+..+. .+|++||| .|++|.+++...+ .+++..+..++.||+.||.|||+.||+
T Consensus 49 ~~e~~~l~~~~~~~i~~~~~-~~~~~~---~~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~i~ 123 (305)
T cd05609 49 FVERDILTFAENPFVVSMFC-SFETKR---HLCMVMEYVEGGDCATLLKNIG-ALPVDMARMYFAETVLALEYLHNYGIV 123 (305)
T ss_pred HHHHHHHHhCCCCCeeeeEE-EEecCC---EEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 36677889999999999998 444433 67999999 8999999995543 589999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+||+++.++.++++|||.+......... .+ .+.....
T Consensus 124 H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~-~~---------------------------~~~~~~~--------- 166 (305)
T cd05609 124 HRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTT-NL---------------------------YEGHIEK--------- 166 (305)
T ss_pred ccCCchHHEEECCCCCEEEeeCCCccccCcCccc-cc---------------------------ccccccc---------
Confidence 9999999999999999999999987421110000 00 0000000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
...........|+..|+|||.+.+..++.++|||||||++||
T Consensus 167 --------------------------------------~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~e 208 (305)
T cd05609 167 --------------------------------------DTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYE 208 (305)
T ss_pred --------------------------------------chhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHH
Confidence 000000011357889999999988889999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCC-CccccccC-chHHHHHHHcCCCCCCCCCC---hHHHHcCcccCCC
Q 004989 304 LFC---PFSTGEEKTRTMSSLRHRVL-PPQLLLKF-PKEASFCLWLLHPEPSGRPK---MGELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~~-p~~~~~~~-p~~~~Li~~~L~~dP~~Rpt---a~eiL~hp~~~~~ 367 (720)
|++ ||.+.... ........... .+...... +...+||.+||+++|++||+ +.++|+||||...
T Consensus 209 l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~~~~~ 279 (305)
T cd05609 209 FLVGCVPFFGDTPE-ELFGQVISDDIEWPEGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFLGL 279 (305)
T ss_pred HHhCCCCCCCCCHH-HHHHHHHhcccCCCCccccCCHHHHHHHHHHhccChhhccCccCHHHHHhCccccCC
Confidence 999 66654333 33333333221 12222233 34569999999999999997 7999999999775
No 202
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.96 E-value=2.3e-29 Score=271.55 Aligned_cols=218 Identities=18% Similarity=0.160 Sum_probs=155.9
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+..+|..+++.++||||+++++ ++..+. .++++||| .+++|.+++.+. ...+++..++.++.||+.||+|||+.
T Consensus 45 ~~~~e~~~~~~l~h~niv~~~~-~~~~~~---~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~ 120 (328)
T cd08226 45 ALQNEVVLSHFFRHPNIMTSWT-VFTTGS---WLWVISPFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQN 120 (328)
T ss_pred HHHHHHHHHHhCCCCCcceEee-eEecCC---ceEEEEecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 4446777888899999999999 555543 57999999 889999999543 33589999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+||+++.++.++++||+.+...... .+..+.
T Consensus 121 ~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~-----------------------------------~~~~~~----- 160 (328)
T cd08226 121 GYIHRNIKASHILISGDGLVSLSGLSHLYSLVRN-----------------------------------GQKAKV----- 160 (328)
T ss_pred CeecCCCCHHHEEEeCCCcEEEechHHHhhhhcc-----------------------------------Cccccc-----
Confidence 9999999999999999999999888654211000 000000
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC--CCCccccchhhh
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA--PVSCASDIYRLG 298 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~--~~s~~sDIwSLG 298 (720)
..+ .+ ....++..|+|||++.+. .++.++||||||
T Consensus 161 --------------------------~~~--------------~~---~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG 197 (328)
T cd08226 161 --------------------------VYD--------------FP---QFSTSVLPWLSPELLRQDLYGYNVKSDIYSVG 197 (328)
T ss_pred --------------------------ccc--------------cc---ccccCccCccChhhhcCCCCCCCchhhHHHHH
Confidence 000 00 001346679999999764 378999999999
Q ss_pred chhhhccc---cCCCCchHHHHHHHhhcCCCCc---------------------------------------------cc
Q 004989 299 VLLFELFC---PFSTGEEKTRTMSSLRHRVLPP---------------------------------------------QL 330 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~~p~---------------------------------------------~~ 330 (720)
|++|||++ ||............+......+ ..
T Consensus 198 ~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (328)
T cd08226 198 ITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSS 277 (328)
T ss_pred HHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhhhhhccchhhhhcccccchhccccccccccccccchhh
Confidence 99999998 5544333322222222111000 00
Q ss_pred cccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 331 LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 331 ~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
....+...+|+.+||..||++|||+.|+|+||||...
T Consensus 278 ~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~ 314 (328)
T cd08226 278 KTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQV 314 (328)
T ss_pred hhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHH
Confidence 0112334599999999999999999999999999765
No 203
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=99.96 E-value=2.7e-29 Score=266.49 Aligned_cols=209 Identities=19% Similarity=0.318 Sum_probs=162.0
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++..++||||+++++ .+..+. ..|++||| .+++|.+++... .+++.+++.++.||+.||.|||++||
T Consensus 66 ~~~e~~~l~~l~h~~ii~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~--~l~~~~~~~~~~qi~~~l~~LH~~~i 139 (292)
T cd06658 66 LFNEVVIMRDYHHENVVDMYN-SYLVGD---ELWVVMEFLEGGALTDIVTHT--RMNEEQIATVCLSVLRALSYLHNQGV 139 (292)
T ss_pred HHHHHHHHHhCCCCcHHHHHH-heecCC---eEEEEEeCCCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence 347778899999999999999 444433 67999999 889999988443 38999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.++|+|||++...... .
T Consensus 140 vH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~-----------------------------------~------------ 172 (292)
T cd06658 140 IHRDIKSDSILLTSDGRIKLSDFGFCAQVSKE-----------------------------------V------------ 172 (292)
T ss_pred eecCCCHHHEEEcCCCCEEEccCcchhhcccc-----------------------------------c------------
Confidence 99999999999999999999999887322100 0
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
+ ......|++.|+|||.+.+..++.++|||||||++|
T Consensus 173 ------------------------------------------~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~ 209 (292)
T cd06658 173 ------------------------------------------P-KRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVI 209 (292)
T ss_pred ------------------------------------------c-cCceeecCccccCHHHHccCCCCchhhHHHHHHHHH
Confidence 0 000135789999999998888999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCCCcccc---ccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCccc
Q 004989 303 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLL---LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~---~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
||++ ||...... ..+..+... .++.+. ...+...+|+.+||..||.+|||+.++++||||.....+
T Consensus 210 el~~g~~p~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~~~~~~~ 281 (292)
T cd06658 210 EMIDGEPPYFNEPPL-QAMRRIRDN-LPPRVKDSHKVSSVLRGFLDLMLVREPSQRATAQELLQHPFLKLAGPP 281 (292)
T ss_pred HHHhCCCCCCCCCHH-HHHHHHHhc-CCCccccccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhhccCCc
Confidence 9999 56544332 223333322 222211 223445699999999999999999999999999976443
No 204
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.96 E-value=4.9e-30 Score=259.41 Aligned_cols=214 Identities=18% Similarity=0.213 Sum_probs=161.5
Q ss_pred ccchhhchhhhhhcccCCCCCceecccceeec--CCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHH
Q 004989 58 NDFELRKHSDGVELTHGDHLRNQGGLSGVCEN--EAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVY 135 (720)
Q Consensus 58 ~~~~~r~~~e~~~L~~l~HpnIV~l~~~~~~~--~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~ 135 (720)
.....|..||..++..++|+||++++.++... ......+|+|||+...+|.+.+. -.++-..+..|++|++.|+.
T Consensus 56 ~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~y~v~e~m~~nl~~vi~---~elDH~tis~i~yq~~~~ik 132 (369)
T KOG0665|consen 56 QTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEVYLVMELMDANLCQVIL---MELDHETISYILYQMLCGIK 132 (369)
T ss_pred CccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhHHHHHHhhhhHHHHHHH---HhcchHHHHHHHHHHHHHHH
Confidence 34555888999999999999999999944322 12233479999999999999885 23778899999999999999
Q ss_pred HHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccC
Q 004989 136 AAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 215 (720)
Q Consensus 136 yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~ 215 (720)
|||+.||+||||||+||++..++.+|+.|||+++.-+. ||
T Consensus 133 ~lhs~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~-----------------------------------~~----- 172 (369)
T KOG0665|consen 133 HLHSAGIIHRDLKPSNIVVNSDCTLKILDFGLARTEDT-----------------------------------DF----- 172 (369)
T ss_pred HHHhcceeecccCcccceecchhheeeccchhhcccCc-----------------------------------cc-----
Confidence 99999999999999999999999999998888743211 11
Q ss_pred CCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccch
Q 004989 216 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIY 295 (720)
Q Consensus 216 ~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIw 295 (720)
..+.++.|..|+|||++.+..|...+|||
T Consensus 173 ---------------------------------------------------~mtpyVvtRyyrapevil~~~~ke~vdiw 201 (369)
T KOG0665|consen 173 ---------------------------------------------------MMTPYVVTRYYRAPEVILGMGYKENVDIW 201 (369)
T ss_pred ---------------------------------------------------ccCchhheeeccCchheeccCCcccchhh
Confidence 11236889999999999999999999999
Q ss_pred hhhchhhhcccc---CCCCchHHHH--------------HHHhh------------------cCCCCcc-----ccc---
Q 004989 296 RLGVLLFELFCP---FSTGEEKTRT--------------MSSLR------------------HRVLPPQ-----LLL--- 332 (720)
Q Consensus 296 SLGvll~eLltp---f~~~~~~~~~--------------~~~l~------------------~~~~p~~-----~~~--- 332 (720)
|+||++.||+++ |++....... +..+. ...+|.. ...
T Consensus 202 SvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~ 281 (369)
T KOG0665|consen 202 SVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKL 281 (369)
T ss_pred hhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCcc
Confidence 999999999982 3332211111 11110 0011111 111
Q ss_pred cCchHHHHHHHcCCCCCCCCCChHHHHcCcccC
Q 004989 333 KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLN 365 (720)
Q Consensus 333 ~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~ 365 (720)
......+++.+||..||++|.+++++|+||||+
T Consensus 282 ~~~~ardll~~MLvi~pe~Risv~daL~HPY~~ 314 (369)
T KOG0665|consen 282 DCSLARDLLSKMLVIDPEKRISVDDALRHPYIK 314 (369)
T ss_pred chHHHHHHHHHhhccChhhcccHHHHhcCCeee
Confidence 111223899999999999999999999999998
No 205
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=99.96 E-value=6.3e-29 Score=262.58 Aligned_cols=207 Identities=19% Similarity=0.345 Sum_probs=163.3
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..++..++||||+++++ .+.... ..++++|| .|++|.+++.. ..+++.+++.++.||+.||.|||++||+
T Consensus 64 ~~e~~~l~~~~h~~vv~~~~-~~~~~~---~~~~v~e~~~~~~L~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~i~ 137 (285)
T cd06648 64 FNEVVIMRDYQHPNIVEMYS-SYLVGD---ELWVVMEFLEGGALTDIVTH--TRMNEEQIATVCLAVLKALSFLHAQGVI 137 (285)
T ss_pred HHHHHHHHHcCCCChheEEE-EEEcCC---eEEEEEeccCCCCHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 36777899999999999999 444433 57999999 89999999965 3489999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||+|+||+++.++.++|+|||.+...... .
T Consensus 138 H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~-----------------------------------~------------- 169 (285)
T cd06648 138 HRDIKSDSILLTSDGRVKLSDFGFCAQVSKE-----------------------------------V------------- 169 (285)
T ss_pred cCCCChhhEEEcCCCcEEEcccccchhhccC-----------------------------------C-------------
Confidence 9999999999999999999998876321110 0
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
+ ......|++.|+|||.+.+..++.++|||||||++||
T Consensus 170 -----------------------------------------~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~e 207 (285)
T cd06648 170 -----------------------------------------P-RRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIE 207 (285)
T ss_pred -----------------------------------------c-ccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHH
Confidence 0 0001357899999999988889999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCCCcccc---ccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004989 304 LFC---PFSTGEEKTRTMSSLRHRVLPPQLL---LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~~p~~~~---~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
|++ ||...... ..+..+.... ++... ...+...+|+.+||+++|++||++.++++||||.....
T Consensus 208 ll~g~~p~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~ 277 (285)
T cd06648 208 MVDGEPPYFNEPPL-QAMKRIRDNL-PPKLKNLHKVSPRLRSFLDRMLVRDPAQRATAAELLNHPFLAKAGP 277 (285)
T ss_pred HHhCCCCCcCCCHH-HHHHHHHhcC-CCCCcccccCCHHHHHHHHHHcccChhhCcCHHHHccCcccccCCC
Confidence 999 66554332 3344444432 22211 12345569999999999999999999999999998754
No 206
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.96 E-value=4.5e-29 Score=261.23 Aligned_cols=193 Identities=21% Similarity=0.262 Sum_probs=150.1
Q ss_pred CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEE
Q 004989 75 DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFV 153 (720)
Q Consensus 75 ~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NIL 153 (720)
+||||+++++ .+.... .+|+|||| .+++|.+++.... .+++.+++.++.||+.||.|||+.|++||||||+||+
T Consensus 67 ~h~~iv~~~~-~~~~~~---~~~iv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil 141 (267)
T PHA03390 67 DNPNFIKLYY-SVTTLK---GHVLIMDYIKDGDLFDLLKKEG-KLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVL 141 (267)
T ss_pred cCCCEEEEEE-EEecCC---eeEEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEE
Confidence 7999999999 554443 68999999 8999999996544 6999999999999999999999999999999999999
Q ss_pred EccCC-ceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCCCcc
Q 004989 154 MSSFN-HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAY 232 (720)
Q Consensus 154 l~~~~-~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~ 232 (720)
++.++ .++++|||.+...+..
T Consensus 142 ~~~~~~~~~l~dfg~~~~~~~~---------------------------------------------------------- 163 (267)
T PHA03390 142 YDRAKDRIYLCDYGLCKIIGTP---------------------------------------------------------- 163 (267)
T ss_pred EeCCCCeEEEecCccceecCCC----------------------------------------------------------
Confidence 99888 9999988876322110
Q ss_pred ccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhccc---cCC
Q 004989 233 GTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFS 309 (720)
Q Consensus 233 ~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt---pf~ 309 (720)
....|+..|+|||++.+..++.++|||||||++|||++ ||.
T Consensus 164 ------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~ 207 (267)
T PHA03390 164 ------------------------------------SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFK 207 (267)
T ss_pred ------------------------------------ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCC
Confidence 00246889999999998889999999999999999999 665
Q ss_pred CCchHHHHHHHhhc--CCCCccccccCchHHHHHHHcCCCCCCCCCC-hHHHHcCcccCC
Q 004989 310 TGEEKTRTMSSLRH--RVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-MGELLQSEFLNE 366 (720)
Q Consensus 310 ~~~~~~~~~~~l~~--~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpt-a~eiL~hp~~~~ 366 (720)
...........+.. ....+.+....+...+||.+||+++|.+||+ ++++|+||||..
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h~~~~~ 267 (267)
T PHA03390 208 EDEDEELDLESLLKRQQKKLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKHPFLKI 267 (267)
T ss_pred CCCcchhhHHHHHHhhcccCCcccccCHHHHHHHHHHhccChhhCCchHHHHhcCCcccC
Confidence 33221111111111 1111222234456669999999999999996 699999999963
No 207
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=99.96 E-value=3.4e-29 Score=261.28 Aligned_cols=209 Identities=16% Similarity=0.177 Sum_probs=156.3
Q ss_pred chhhhhhcccC-CCCCceecccceeecCC---CCCcEEEEEec-CCCCHHHHHhCC---CCCCCHHHHHHHHHHHHHHHH
Q 004989 64 KHSDGVELTHG-DHLRNQGGLSGVCENEA---AIDPFVHAIEW-GDVSLRQWLDKP---KRSVDVYECLHIFRQIVEIVY 135 (720)
Q Consensus 64 ~~~e~~~L~~l-~HpnIV~l~~~~~~~~~---~~~~~~lv~E~-~ggsL~~~L~~~---~~~l~~~~~~~i~~QIl~aL~ 135 (720)
..+|..++.++ .||||+++++ ++.... ....+|++||| .+++|.+++... ...+++..++.++.||+.||.
T Consensus 49 ~~~e~~~l~~~~~h~~i~~~~~-~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~ 127 (275)
T cd06608 49 IKEEYNILRKYSNHPNIATFYG-AFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLA 127 (275)
T ss_pred HHHHHHHHHHhcCCCChheEEE-EEEecCCCCcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHH
Confidence 34677788887 7999999999 443332 24568999999 889999988432 356899999999999999999
Q ss_pred HHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccC
Q 004989 136 AAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 215 (720)
Q Consensus 136 yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~ 215 (720)
|||++|++|+||+|+||+++.++.++|+|||.+.......
T Consensus 128 ~lH~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~---------------------------------------- 167 (275)
T cd06608 128 YLHENKVIHRDIKGQNILLTKNAEVKLVDFGVSAQLDSTL---------------------------------------- 167 (275)
T ss_pred HHhcCCcccCCCCHHHEEEccCCeEEECCCccceecccch----------------------------------------
Confidence 9999999999999999999999999999998773221000
Q ss_pred CCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC-----CCCc
Q 004989 216 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-----PVSC 290 (720)
Q Consensus 216 ~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-----~~s~ 290 (720)
.......|++.|+|||++... .++.
T Consensus 168 --------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~ 197 (275)
T cd06608 168 --------------------------------------------------GRRNTFIGTPYWMAPEVIACDEQPDASYDA 197 (275)
T ss_pred --------------------------------------------------hhhcCccccccccCHhHhcccccccCCccc
Confidence 000013578899999998542 3788
Q ss_pred cccchhhhchhhhccc---cCCCCchHHHHHHHhhcCCCCccc-cccCc-hHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004989 291 ASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQL-LLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 291 ~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~-~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
++|||||||++|+|++ ||.......... .+.....+... ...++ ...+|+.+||..||++|||+.++++|||+
T Consensus 198 ~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~~~ 275 (275)
T cd06608 198 RSDVWSLGITAIELADGKPPLCDMHPMRALF-KIPRNPPPTLKSPENWSKKFNDFISECLIKNYEQRPFMEELLEHPFI 275 (275)
T ss_pred cccHHHhHHHHHHHHhCCCCccccchHHHHH-HhhccCCCCCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcCCCC
Confidence 9999999999999999 665443332222 22222222111 11133 34599999999999999999999999996
No 208
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=99.96 E-value=6.7e-29 Score=257.18 Aligned_cols=204 Identities=18% Similarity=0.212 Sum_probs=159.0
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+...|..+++.++||||+++++ .+.+.. .+|++||| .+++|.+++.. .+..+++..++.++.||+.||.|||++
T Consensus 44 ~~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~ 119 (255)
T cd08219 44 DSRKEAVLLAKMKHPNIVAFKE-SFEADG---HLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEK 119 (255)
T ss_pred HHHHHHHHHHhCCCCCcceEEE-EEEECC---EEEEEEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhC
Confidence 3446777899999999999999 555443 67999999 89999999843 445589999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+|+||||+||+++.++.++++|||.+....... .+
T Consensus 120 ~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~---------------------------------~~---------- 156 (255)
T cd08219 120 RVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPG---------------------------------AY---------- 156 (255)
T ss_pred CcccCCCCcceEEECCCCcEEEcccCcceeecccc---------------------------------cc----------
Confidence 99999999999999999999999998873321110 00
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhch
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
.....|++.|+|||++.+..++.++|+||||++
T Consensus 157 -----------------------------------------------~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i 189 (255)
T cd08219 157 -----------------------------------------------ACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCI 189 (255)
T ss_pred -----------------------------------------------cccccCCccccCHHHHccCCcCchhhhhhhchh
Confidence 001357889999999988889999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004989 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~h 361 (720)
+|+|++ ||...... .....+..+..++..........+|+.+||..||.+||++.+++.-
T Consensus 190 ~~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 190 LYELCTLKHPFQANSWK-NLILKVCQGSYKPLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred heehhhccCCCCCCCHH-HHHHHHhcCCCCCCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 999998 66554332 3333444444433222233445699999999999999999999863
No 209
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=99.96 E-value=4.9e-30 Score=251.13 Aligned_cols=250 Identities=15% Similarity=0.129 Sum_probs=169.2
Q ss_pred cCCcccccccccC-------CCCCCcccccccccCCCCccchhhchhhhhhcccCCCCCceecccceee-cCCCCCcEEE
Q 004989 27 DSSRALNISGVSD-------RNPRLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCE-NEAAIDPFVH 98 (720)
Q Consensus 27 ~~~~~~~~~~~~~-------~~~~~~~~~r~~~~~~~~~~~~~r~~~e~~~L~~l~HpnIV~l~~~~~~-~~~~~~~~~l 98 (720)
..-+.+|.+|++- .+.+..+-+|+.+... +..-+.-+|+..-++++||||+++++.... ..+.....|+
T Consensus 24 ri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~---~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~yl 100 (302)
T KOG2345|consen 24 RIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQ---EDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAYL 100 (302)
T ss_pred EEeeeecCCCceeeeeecccCcccchhhheeeccch---HHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEEE
Confidence 3445666666654 3455556666666442 222233366667888999999999983332 2224456899
Q ss_pred EEec-CCCCHHHHHh---CCCCCCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCCCCcEEEccCCceEEeecCcccCCC
Q 004989 99 AIEW-GDVSLRQWLD---KPKRSVDVYECLHIFRQIVEIVYAAHSQG--IVVHNVRPSCFVMSSFNHVSFIESASCSDSG 172 (720)
Q Consensus 99 v~E~-~ggsL~~~L~---~~~~~l~~~~~~~i~~QIl~aL~yLHs~g--IvHrDLKP~NILl~~~~~vkliDfg~a~~~g 172 (720)
+++| ..|+|.+.+. ..+..+++.+++.||.+|++||.+||+.. ++||||||.|||+++++.+++.|||.++...
T Consensus 101 l~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~GS~~~a~ 180 (302)
T KOG2345|consen 101 LLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDLGSATQAP 180 (302)
T ss_pred EeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEeccCccccc
Confidence 9999 9999999993 34546999999999999999999999998 9999999999999999999999999985421
Q ss_pred CCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCCCcccccccccccccccccccccc
Q 004989 173 SDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRV 252 (720)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~ 252 (720)
..-. ..+ +...+.+.
T Consensus 181 i~i~-----------------------~~~----------------------------------------~a~~lQe~-- 195 (302)
T KOG2345|consen 181 IQIE-----------------------GSR----------------------------------------QALRLQEW-- 195 (302)
T ss_pred eEee-----------------------chH----------------------------------------HHHHHHHH--
Confidence 1100 000 00000000
Q ss_pred chhhhhcccCCCCccccccccCCcccCcccccCCC---CCccccchhhhchhhhccc---cCCCCchHH--HHHHHhhcC
Q 004989 253 NVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP---VSCASDIYRLGVLLFELFC---PFSTGEEKT--RTMSSLRHR 324 (720)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~---~s~~sDIwSLGvll~eLlt---pf~~~~~~~--~~~~~l~~~ 324 (720)
.....|..|+|||.+.-.. .+.++|||||||+||+|+. ||......- .+.......
T Consensus 196 ----------------a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaLAv~n~q 259 (302)
T KOG2345|consen 196 ----------------AEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLALAVQNAQ 259 (302)
T ss_pred ----------------HHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEEeeeccc
Confidence 0123488899999996443 7899999999999999998 665421110 001111111
Q ss_pred CCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 325 VLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 325 ~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
...|.-........+||++||++||.+||++.+++.
T Consensus 260 ~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~ 295 (302)
T KOG2345|consen 260 ISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLS 295 (302)
T ss_pred cccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHH
Confidence 111222222233449999999999999999999986
No 210
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=99.96 E-value=7.3e-29 Score=257.95 Aligned_cols=204 Identities=14% Similarity=0.140 Sum_probs=156.8
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++.+++||||+++++ +++.. .+++|||| .+++|.+++......+++..++.++.||+.||.|||++|+
T Consensus 42 ~~~E~~~l~~l~h~~ii~~~~-~~~~~----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i 116 (257)
T cd05115 42 MMREAEIMHQLDNPYIVRMIG-VCEAE----ALMLVMEMASGGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNF 116 (257)
T ss_pred HHHHHHHHHhcCCCCeEEEEE-EEcCC----CeEEEEEeCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCe
Confidence 447788999999999999999 55432 47999999 8999999996555569999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.++|+|||.+.........
T Consensus 117 ~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~--------------------------------------------- 151 (257)
T cd05115 117 VHRDLAARNVLLVNQHYAKISDFGLSKALGADDSY--------------------------------------------- 151 (257)
T ss_pred eecccchheEEEcCCCcEEeccCCccccccCCccc---------------------------------------------
Confidence 99999999999999999999999887432111000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
.. ......++..|+|||.+.+..++.++|||||||++|
T Consensus 152 ----------------------~~--------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ 189 (257)
T cd05115 152 ----------------------YK--------------------ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMW 189 (257)
T ss_pred ----------------------ee--------------------ccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHH
Confidence 00 000012357899999998888999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 303 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
||++ ||...... .....+..+..++......+...+++.+||..+|++||++.+|++
T Consensus 190 el~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~ 250 (257)
T cd05115 190 EAFSYGQKPYKKMKGP-EVMSFIEQGKRLDCPAECPPEMYALMKDCWIYKWEDRPNFAKVEE 250 (257)
T ss_pred HHhcCCCCCcCcCCHH-HHHHHHHCCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 9985 55544333 344444444333322333455569999999999999999999875
No 211
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=99.96 E-value=6.2e-29 Score=258.19 Aligned_cols=203 Identities=16% Similarity=0.211 Sum_probs=155.9
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..|..++.+++||||+++++ ++.... .++++||| .+++|.+++......+++..++.++.||+.||.|||+.||+
T Consensus 47 ~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~ 122 (256)
T cd05113 47 IEEAKVMMKLSHEKLVQLYG-VCTKQR---PIYIVTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFI 122 (256)
T ss_pred HHHHHHHhcCCCCCeeeEEE-EEccCC---CcEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 46778899999999999999 554433 57999999 88999999965544689999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
|+||||+||+++.++.+||+|||.+....... +
T Consensus 123 H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~----------------------------------~------------- 155 (256)
T cd05113 123 HRDLAARNCLVDDQGCVKVSDFGLSRYVLDDE----------------------------------Y------------- 155 (256)
T ss_pred ccccCcceEEEcCCCCEEECCCccceecCCCc----------------------------------e-------------
Confidence 99999999999999999999988763321100 0
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
. ......++..|+|||.+.+..++.++|||||||++|+
T Consensus 156 -----------------------~-------------------~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~ 193 (256)
T cd05113 156 -----------------------T-------------------SSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWE 193 (256)
T ss_pred -----------------------e-------------------ecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHH
Confidence 0 0000234678999999988889999999999999999
Q ss_pred ccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004989 304 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 304 Llt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~h 361 (720)
|++ ||...... .....+.....++......+...+++.+||+++|.+||++.+|+.+
T Consensus 194 l~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~ 254 (256)
T cd05113 194 VYSLGKMPYERFNNS-ETVEKVSQGLRLYRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSS 254 (256)
T ss_pred HhcCCCCCcCcCCHH-HHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHh
Confidence 997 55443332 3333344333332222233455699999999999999999999863
No 212
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=99.96 E-value=4.6e-29 Score=262.33 Aligned_cols=204 Identities=19% Similarity=0.196 Sum_probs=154.1
Q ss_pred hcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHHHC-Cceec
Q 004989 70 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHSQ-GIVVH 145 (720)
Q Consensus 70 ~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~---~~~~l~~~~~~~i~~QIl~aL~yLHs~-gIvHr 145 (720)
.++.++||||+++++ .+..+. .+|++|||..++|.+++.. ....+++..++.++.||+.||.|||++ +++||
T Consensus 53 ~~~~~~~~~iv~~~~-~~~~~~---~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~ 128 (283)
T cd06617 53 SMRSVDCPYTVTFYG-ALFREG---DVWICMEVMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHR 128 (283)
T ss_pred HHHHcCCCCeeeeeE-EEecCC---cEEEEhhhhcccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecC
Confidence 456689999999999 444333 5799999977899888733 334589999999999999999999997 99999
Q ss_pred cCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccccc
Q 004989 146 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 225 (720)
Q Consensus 146 DLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~ 225 (720)
||||+||+++.++.+||+|||.+.......
T Consensus 129 dlkp~nil~~~~~~~kl~dfg~~~~~~~~~-------------------------------------------------- 158 (283)
T cd06617 129 DVKPSNVLINRNGQVKLCDFGISGYLVDSV-------------------------------------------------- 158 (283)
T ss_pred CCCHHHEEECCCCCEEEeeccccccccccc--------------------------------------------------
Confidence 999999999999999999998873221000
Q ss_pred ccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC----CCCCccccchhhhchh
Q 004989 226 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG----APVSCASDIYRLGVLL 301 (720)
Q Consensus 226 ~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~----~~~s~~sDIwSLGvll 301 (720)
......|+..|+|||.+.+ ..++.++|||||||++
T Consensus 159 -----------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l 197 (283)
T cd06617 159 -----------------------------------------AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITM 197 (283)
T ss_pred -----------------------------------------ccccccCCccccChhhcCCcccccccCccccchhhHHHH
Confidence 0001356889999999865 3478999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
|+|++ ||..................+......++ ...+|+.+||..+|.+||++.++++||||....
T Consensus 198 ~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 268 (283)
T cd06617 198 IELATGRFPYDSWKTPFQQLKQVVEEPSPQLPAEKFSPEFQDFVNKCLKKNYKERPNYPELLQHPFFELHL 268 (283)
T ss_pred HHHHhCCCCCCccccCHHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhhhcc
Confidence 99999 55443222222333333322222222334 445999999999999999999999999999864
No 213
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=99.96 E-value=7.7e-29 Score=257.37 Aligned_cols=201 Identities=14% Similarity=0.130 Sum_probs=155.4
Q ss_pred hhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCcee
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|..+++.++||||+++++ ++..+ .++++||| .+++|.+++.... .+++..+..++.||+.||.|||++||+|
T Consensus 45 ~e~~~l~~l~h~~i~~~~~-~~~~~----~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~al~~lH~~~i~H 118 (257)
T cd05116 45 REANVMQQLDNPYIVRMIG-ICEAE----SWMLVMELAELGPLNKFLQKNK-HVTEKNITELVHQVSMGMKYLEETNFVH 118 (257)
T ss_pred HHHHHHHhCCCCCcceEEE-EEcCC----CcEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCEee
Confidence 6778999999999999999 55432 46899999 8899999995443 4899999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccc
Q 004989 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||.||+++.++.++|+|||.+...+.... +
T Consensus 119 ~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~---------------------------------~-------------- 151 (257)
T cd05116 119 RDLAARNVLLVTQHYAKISDFGLSKALGADEN---------------------------------Y-------------- 151 (257)
T ss_pred cccchhhEEEcCCCeEEECCCccccccCCCCC---------------------------------e--------------
Confidence 99999999999999999999888743321100 0
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhc
Q 004989 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 304 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eL 304 (720)
. .......++..|+|||.+....++.++|||||||++|||
T Consensus 152 ~----------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el 191 (257)
T cd05116 152 Y----------------------------------------KAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEA 191 (257)
T ss_pred e----------------------------------------eecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHH
Confidence 0 000002346789999999888899999999999999999
Q ss_pred cc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 305 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 305 lt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
++ ||...... .....+..+..++......++..+||.+||.+||++||++.+|.+
T Consensus 192 ~t~g~~p~~~~~~~-~~~~~i~~~~~~~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~ 250 (257)
T cd05116 192 FSYGQKPYKGMKGN-EVTQMIESGERMECPQRCPPEMYDLMKLCWTYGVDERPGFAVVEL 250 (257)
T ss_pred HhCCCCCCCCCCHH-HHHHHHHCCCCCCCCCCCCHHHHHHHHHHhccCchhCcCHHHHHH
Confidence 96 55544332 444455554443333334456669999999999999999999864
No 214
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.96 E-value=2.1e-29 Score=267.09 Aligned_cols=220 Identities=17% Similarity=0.200 Sum_probs=171.8
Q ss_pred cchhhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHH-hCCCCCCCHHHHHHHHHHHHHHHHHH
Q 004989 59 DFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWL-DKPKRSVDVYECLHIFRQIVEIVYAA 137 (720)
Q Consensus 59 ~~~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L-~~~~~~l~~~~~~~i~~QIl~aL~yL 137 (720)
.+.+| .|..||.++.||.||.+-. .|+..+ .+++|||-..|+..+.| ....+.+++...+.++.||+.||.||
T Consensus 607 esqlR--~EVaILq~l~HPGiV~le~-M~ET~e---rvFVVMEKl~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~L 680 (888)
T KOG4236|consen 607 ESQLR--NEVAILQNLHHPGIVNLEC-MFETPE---RVFVVMEKLHGDMLEMILSSEKGRLPERITKFLVTQILVALRYL 680 (888)
T ss_pred HHHHH--HHHHHHHhcCCCCeeEEEE-eecCCc---eEEEEehhhcchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHh
Confidence 34445 4667999999999999988 566654 57999999666766666 44445599999999999999999999
Q ss_pred HHCCceeccCCCCcEEEcc---CCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhccccccccccc
Q 004989 138 HSQGIVVHNVRPSCFVMSS---FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVT 214 (720)
Q Consensus 138 Hs~gIvHrDLKP~NILl~~---~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~ 214 (720)
|-+||||+||||+|||+.+ .-++||||||+|+..|... |
T Consensus 681 H~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEks----------------------------------F---- 722 (888)
T KOG4236|consen 681 HFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKS----------------------------------F---- 722 (888)
T ss_pred hhcceeeccCCchheeeccCCCCCceeeccccceeecchhh----------------------------------h----
Confidence 9999999999999999973 3578888888886654431 1
Q ss_pred CCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccc
Q 004989 215 APTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDI 294 (720)
Q Consensus 215 ~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDI 294 (720)
....+|||.|+|||++....|..+-|+
T Consensus 723 -----------------------------------------------------RrsVVGTPAYLaPEVLrnkGyNrSLDM 749 (888)
T KOG4236|consen 723 -----------------------------------------------------RRSVVGTPAYLAPEVLRNKGYNRSLDM 749 (888)
T ss_pred -----------------------------------------------------hhhhcCCccccCHHHHhhccccccccc
Confidence 112689999999999999999999999
Q ss_pred hhhhchhhhccccCCCCchHHHHHHHhhcC--CCCccccccCchHH-HHHHHcCCCCCCCCCChHHHHcCcccCCCccch
Q 004989 295 YRLGVLLFELFCPFSTGEEKTRTMSSLRHR--VLPPQLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSM 371 (720)
Q Consensus 295 wSLGvll~eLltpf~~~~~~~~~~~~l~~~--~~p~~~~~~~p~~~-~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~l 371 (720)
||+|||+|--|.+-.++++...+...|.+. .+|+..+.+.+.++ +||..+|+..-.+|.+++..|.|||++....-+
T Consensus 750 WSVGVIiYVsLSGTFPFNEdEdIndQIQNAaFMyPp~PW~eis~~AidlIn~LLqVkm~kRysvdk~lsh~Wlq~yq~w~ 829 (888)
T KOG4236|consen 750 WSVGVIIYVSLSGTFPFNEDEDINDQIQNAAFMYPPNPWSEISPEAIDLINNLLQVKMRKRYSVDKSLSHPWLQDYQTWL 829 (888)
T ss_pred eeeeEEEEEEecccccCCCccchhHHhhccccccCCCchhhcCHHHHHHHHHHHHHHHHHhcchHhhccchhhhcchHHH
Confidence 999999999998333333333334444432 35666666665555 999999999999999999999999999985544
Q ss_pred HHHH
Q 004989 372 EERE 375 (720)
Q Consensus 372 ~e~~ 375 (720)
.-++
T Consensus 830 DLRe 833 (888)
T KOG4236|consen 830 DLRE 833 (888)
T ss_pred HHHH
Confidence 4433
No 215
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.96 E-value=6.2e-29 Score=269.01 Aligned_cols=219 Identities=17% Similarity=0.202 Sum_probs=159.9
Q ss_pred hchhhhhhcccCCCCCceecccceeecC-CCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENE-AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~-~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+...|..++.+++||||+++++.+.... .....+|++|||.+++|.+++... .+++..++.++.||+.||.|||+.|
T Consensus 49 ~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~--~l~~~~~~~i~~ql~~aL~~LH~~~ 126 (336)
T cd07849 49 RTLREIKILRRFKHENIIGILDIIRPPSFESFNDVYIVQELMETDLYKLIKTQ--HLSNDHIQYFLYQILRGLKYIHSAN 126 (336)
T ss_pred HHHHHHHHHHhCCCCCcCchhheeecccccccceEEEEehhcccCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 4457888999999999999999433222 123457999999777999888443 4999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.++|+|||++......... .
T Consensus 127 ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~--------------------------------~----------- 163 (336)
T cd07849 127 VLHRDLKPSNLLLNTNCDLKICDFGLARIADPEHDH--------------------------------T----------- 163 (336)
T ss_pred eeccCCCHHHEEECCCCCEEECcccceeeccccccc--------------------------------c-----------
Confidence 999999999999999999999999887432111000 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC-CCCCccccchhhhch
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVL 300 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sDIwSLGvl 300 (720)
. ......||+.|+|||.+.+ ..++.++|||||||+
T Consensus 164 ----------------------------------------~----~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvi 199 (336)
T cd07849 164 ----------------------------------------G----FLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCI 199 (336)
T ss_pred ----------------------------------------C----CcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHH
Confidence 0 0011467999999998765 458999999999999
Q ss_pred hhhccc---cCCCCchHHHH--HHHhhcCC-------------------CC--c------cccccCchHHHHHHHcCCCC
Q 004989 301 LFELFC---PFSTGEEKTRT--MSSLRHRV-------------------LP--P------QLLLKFPKEASFCLWLLHPE 348 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~--~~~l~~~~-------------------~p--~------~~~~~~p~~~~Li~~~L~~d 348 (720)
+|+|++ ||......... +..+.... .+ + ......+...+|+.+||+.+
T Consensus 200 l~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~d 279 (336)
T cd07849 200 LAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFN 279 (336)
T ss_pred HHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCC
Confidence 999999 55443221110 00000000 00 0 01122345569999999999
Q ss_pred CCCCCChHHHHcCcccCCCccc
Q 004989 349 PSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 349 P~~Rpta~eiL~hp~~~~~~~~ 370 (720)
|++|||+.|+++||||....+.
T Consensus 280 P~~Rpt~~e~l~hp~~~~~~~~ 301 (336)
T cd07849 280 PHKRITVEEALAHPYLEQYHDP 301 (336)
T ss_pred hhhCcCHHHHhcCccccccCCC
Confidence 9999999999999999988654
No 216
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=99.96 E-value=6.4e-29 Score=257.29 Aligned_cols=207 Identities=17% Similarity=0.231 Sum_probs=162.5
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
....|..++++++||||+++++ ++.... ..|++||| .+++|.+++.. ....+++..++.++.||+.||.|||++
T Consensus 45 ~~~~e~~~l~~l~~~~i~~~~~-~~~~~~---~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~ 120 (256)
T cd08218 45 ESRKEVAVLSNMKHPNIVQYQE-SFEENG---NLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDR 120 (256)
T ss_pred HHHHHHHHHHhCCCCCeeeeEe-eecCCC---eEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 3446777999999999999999 444433 67999999 89999999854 334589999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
|++|+||+|+||+++.++.++++|||.+........
T Consensus 121 ~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~-------------------------------------------- 156 (256)
T cd08218 121 KILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVE-------------------------------------------- 156 (256)
T ss_pred CEecCCCCHHHEEEcCCCCEEEeeccceeecCcchh--------------------------------------------
Confidence 999999999999999999999999987732211000
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhch
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
......|++.|+|||++.+..++.++|+|||||+
T Consensus 157 ----------------------------------------------~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i 190 (256)
T cd08218 157 ----------------------------------------------LARTCIGTPYYLSPEICENRPYNNKSDIWALGCV 190 (256)
T ss_pred ----------------------------------------------hhhhccCCccccCHHHhCCCCCCCccchhHHHHH
Confidence 0001357888999999988889999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004989 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
+|+|++ ||....... ....+..+..++......+...++|.+||+.+|.+||++.++++||||
T Consensus 191 ~~~l~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~~~~ 256 (256)
T cd08218 191 LYEMCTLKHAFEAGNMKN-LVLKIIRGSYPPVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEKNFI 256 (256)
T ss_pred HHHHHcCCCCccCCCHHH-HHHHHhcCCCCCCcccCCHHHHHHHHHHhhCChhhCcCHHHHhhCcCC
Confidence 999999 555544433 333333444443333334456699999999999999999999999997
No 217
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.96 E-value=4.5e-29 Score=258.71 Aligned_cols=217 Identities=17% Similarity=0.216 Sum_probs=163.5
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+...|..++.+++||||+++++ .+..+ ..+|++||| .+++|.+++.+.+ .+++..++.++.||+.||.|||++|
T Consensus 39 ~~~~e~~~l~~~~h~~i~~~~~-~~~~~---~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~L~~lH~~~ 113 (265)
T cd05579 39 QVLTERDILSQAQSPYVVKLYY-SFQGK---KNLYLVMEYLPGGDLASLLENVG-SLDEDVARIYIAEIVLALEYLHSNG 113 (265)
T ss_pred HHHHHHHHHHhCCCcchhHHHH-heecC---cEEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcC
Confidence 4446777899999999999998 44443 267999999 7899999996544 5999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
++|+||+|+||+++.++.++|+|||++......... ..
T Consensus 114 i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~-------------------------------~~----------- 151 (265)
T cd05579 114 IIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQI-------------------------------NL----------- 151 (265)
T ss_pred eecCCCCHHHeEEcCCCCEEEEecccchhcccCccc-------------------------------cc-----------
Confidence 999999999999999999999999987432111000 00
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
...........++..|+|||.+.+..++.++|||||||++
T Consensus 152 ----------------------------------------~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~ 191 (265)
T cd05579 152 ----------------------------------------NDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCIL 191 (265)
T ss_pred ----------------------------------------ccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHH
Confidence 0000000114578899999999888899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCC-ccccccCchHHHHHHHcCCCCCCCCCCh---HHHHcCcccCCC
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRHRVLP-PQLLLKFPKEASFCLWLLHPEPSGRPKM---GELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p-~~~~~~~p~~~~Li~~~L~~dP~~Rpta---~eiL~hp~~~~~ 367 (720)
|+|++ ||...... .....+....++ +......+...+|+.+||+.+|.+|||+ .++|+||||+..
T Consensus 192 ~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~~~~~~~ 263 (265)
T cd05579 192 YEFLVGIPPFHGETPE-EIFQNILNGKIEWPEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNHPFFKGI 263 (265)
T ss_pred HHHHhCCCCCCCCCHH-HHHHHHhcCCcCCCccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcCccccCC
Confidence 99999 56544433 233333332222 2221223455699999999999999999 999999999864
No 218
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=99.96 E-value=5.4e-29 Score=259.82 Aligned_cols=197 Identities=12% Similarity=0.122 Sum_probs=146.1
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
...|..++..++||||+++++ ++.... ..+++||| .+++|..++......+++..++.++.||+.||+|||++||
T Consensus 51 ~~~~~~~l~~l~hp~iv~~~~-~~~~~~---~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i 126 (262)
T cd05077 51 FFETASMMRQVSHKHIVLLYG-VCVRDV---ENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDL 126 (262)
T ss_pred HHHHHHHHHhCCCCCEeeEEE-EEecCC---CCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCe
Confidence 345677899999999999999 444443 45899999 8899999886555569999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCc-------eEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccC
Q 004989 143 VVHNVRPSCFVMSSFNH-------VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 215 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~-------vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~ 215 (720)
+||||||+|||++.++. ++++|||.+......
T Consensus 127 vH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~~~~~~----------------------------------------- 165 (262)
T cd05077 127 VHGNVCTKNILLAREGIDGECGPFIKLSDPGIPITVLSR----------------------------------------- 165 (262)
T ss_pred ECCCCCcccEEEecCCccCCCCceeEeCCCCCCccccCc-----------------------------------------
Confidence 99999999999986654 666666554211000
Q ss_pred CCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCccccc-CCCCCccccc
Q 004989 216 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-GAPVSCASDI 294 (720)
Q Consensus 216 ~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~-~~~~s~~sDI 294 (720)
....++..|+|||.+. +..++.++||
T Consensus 166 -----------------------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~~Di 192 (262)
T cd05077 166 -----------------------------------------------------QECVERIPWIAPECVEDSKNLSIAADK 192 (262)
T ss_pred -----------------------------------------------------ccccccccccChhhhcCCCCCCchhHH
Confidence 0135678899999986 4558999999
Q ss_pred hhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004989 295 YRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 295 wSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~h 361 (720)
|||||++|||++ ||...... ....+.....+ ......+...+|+.+||+.||.+||++.+|+++
T Consensus 193 wslG~~l~el~~~~~~p~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~ 260 (262)
T cd05077 193 WSFGTTLWEICYNGEIPLKDKTLA--EKERFYEGQCM-LVTPSCKELADLMTHCMNYDPNQRPFFRAIMRD 260 (262)
T ss_pred HHHHHHHHHHHhCCCCCCCCcchh--HHHHHHhcCcc-CCCCChHHHHHHHHHHcCCChhhCcCHHHHHHh
Confidence 999999999984 44433221 11112222111 111223455699999999999999999999864
No 219
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=99.96 E-value=6.4e-29 Score=264.80 Aligned_cols=204 Identities=16% Similarity=0.150 Sum_probs=150.3
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC------------------CCCCHHHHH
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK------------------RSVDVYECL 124 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~------------------~~l~~~~~~ 124 (720)
..+|..+|.+++||||+++++ ++.+.. .++++||| .+++|.+++.... ..+++..++
T Consensus 66 ~~~E~~~l~~l~h~niv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (304)
T cd05096 66 FLKEVKILSRLKDPNIIRLLG-VCVDED---PLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLL 141 (304)
T ss_pred HHHHHHHHhhcCCCCeeEEEE-EEecCC---ceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHH
Confidence 346788999999999999999 554443 57999999 8999999984321 236778899
Q ss_pred HHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhc
Q 004989 125 HIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTR 204 (720)
Q Consensus 125 ~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 204 (720)
.++.||+.||.|||+.||+||||||+|||++.++.+||+|||++......
T Consensus 142 ~i~~~i~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~------------------------------ 191 (304)
T cd05096 142 HVALQIASGMKYLSSLNFVHRDLATRNCLVGENLTIKIADFGMSRNLYAG------------------------------ 191 (304)
T ss_pred HHHHHHHHHHHHHHHCCccccCcchhheEEcCCccEEECCCccceecccC------------------------------
Confidence 99999999999999999999999999999999999999999887432110
Q ss_pred ccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCccccc
Q 004989 205 LRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA 284 (720)
Q Consensus 205 ~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 284 (720)
+. .. ......++..|+|||++.
T Consensus 192 ----~~----------------------------------~~--------------------~~~~~~~~~~y~aPE~~~ 213 (304)
T cd05096 192 ----DY----------------------------------YR--------------------IQGRAVLPIRWMAWECIL 213 (304)
T ss_pred ----ce----------------------------------eE--------------------ecCcCCCCccccCHHHHh
Confidence 00 00 000124578899999998
Q ss_pred CCCCCccccchhhhchhhhccc-----cCCCCchHHHHHHHh----hc---CCCCccccccCchHHHHHHHcCCCCCCCC
Q 004989 285 GAPVSCASDIYRLGVLLFELFC-----PFSTGEEKTRTMSSL----RH---RVLPPQLLLKFPKEASFCLWLLHPEPSGR 352 (720)
Q Consensus 285 ~~~~s~~sDIwSLGvll~eLlt-----pf~~~~~~~~~~~~l----~~---~~~p~~~~~~~p~~~~Li~~~L~~dP~~R 352 (720)
+..++.++|||||||++|||++ ||...... ...... .. ...+.......+...+|+.+||..||++|
T Consensus 214 ~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~R 292 (304)
T cd05096 214 MGKFTTASDVWAFGVTLWEILMLCKEQPYGELTDE-QVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRER 292 (304)
T ss_pred cCCCCchhhhHHHHHHHHHHHHccCCCCCCcCCHH-HHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhC
Confidence 8889999999999999999985 55543322 111111 11 11111111222345599999999999999
Q ss_pred CChHHHHc
Q 004989 353 PKMGELLQ 360 (720)
Q Consensus 353 pta~eiL~ 360 (720)
||+.+|.+
T Consensus 293 Ps~~~i~~ 300 (304)
T cd05096 293 PSFSDIHA 300 (304)
T ss_pred cCHHHHHH
Confidence 99999954
No 220
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=99.96 E-value=5.4e-29 Score=261.60 Aligned_cols=207 Identities=19% Similarity=0.255 Sum_probs=161.2
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++++++||||+++++ .+.++. .+|+|||| .|++|.+++... ++++..+..++.||+.||+|||+.|
T Consensus 48 ~~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~i~~~--~l~~~~~~~~~~~l~~~l~~lh~~~ 121 (277)
T cd06640 48 DIQQEITVLSQCDSPYVTKYYG-SYLKGT---KLWIIMEYLGGGSALDLLRAG--PFDEFQIATMLKEILKGLDYLHSEK 121 (277)
T ss_pred HHHHHHHHHHhCCCCCEeeEEE-EEEECC---EEEEEEecCCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 4446778999999999999999 555443 68999999 899999999543 4899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
++|+||+|+||+++.++.++++|||.+...... +.
T Consensus 122 ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~----------------------------------~~----------- 156 (277)
T cd06640 122 KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDT----------------------------------QI----------- 156 (277)
T ss_pred ccCcCCChhhEEEcCCCCEEEcccccceeccCC----------------------------------cc-----------
Confidence 999999999999999999999998877332110 00
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......++..|+|||.+.+..++.++|+|||||++
T Consensus 157 ---------------------------------------------~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il 191 (277)
T cd06640 157 ---------------------------------------------KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITA 191 (277)
T ss_pred ---------------------------------------------ccccccCcccccCHhHhccCCCccHHHHHHHHHHH
Confidence 00013568899999999888899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|||++ ||...... .....+... .++.+.... +...+|+.+||+.+|++||++.++++||||...
T Consensus 192 ~el~tg~~p~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 259 (277)
T cd06640 192 IELAKGEPPNSDMHPM-RVLFLIPKN-NPPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKHKFIVKN 259 (277)
T ss_pred HHHHHCCCCCCCcChH-hHhhhhhcC-CCCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhChHhhhc
Confidence 99999 44433322 222222222 233333333 344599999999999999999999999999765
No 221
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=7e-29 Score=269.41 Aligned_cols=241 Identities=19% Similarity=0.232 Sum_probs=170.1
Q ss_pred cccccCCcccccccccC------CCCCCcccccccccCCCCccchhhchhhhhhcccCCCCCceecccceeecCCCCCcE
Q 004989 23 WQDSDSSRALNISGVSD------RNPRLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPF 96 (720)
Q Consensus 23 ~~~~~~~~~~~~~~~~~------~~~~~~~~~r~~~~~~~~~~~~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~ 96 (720)
..+.+..+.+|.++++. .+...++++|........ ......|..+|++++|||+|+|+| +|.+... ..
T Consensus 74 T~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~---~~eF~~Ei~~ls~l~H~Nlv~LlG-yC~e~~~--~~ 147 (361)
T KOG1187|consen 74 TNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQG---EREFLNEVEILSRLRHPNLVKLLG-YCLEGGE--HR 147 (361)
T ss_pred HhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcc---hhHHHHHHHHHhcCCCcCcccEEE-EEecCCc--eE
Confidence 34444455555555444 222445555433332221 222447888999999999999999 6654442 46
Q ss_pred EEEEec-CCCCHHHHHhCCCC-CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCCCcEEEccCCceEEeecCcccCC
Q 004989 97 VHAIEW-GDVSLRQWLDKPKR-SVDVYECLHIFRQIVEIVYAAHSQ---GIVVHNVRPSCFVMSSFNHVSFIESASCSDS 171 (720)
Q Consensus 97 ~lv~E~-~ggsL~~~L~~~~~-~l~~~~~~~i~~QIl~aL~yLHs~---gIvHrDLKP~NILl~~~~~vkliDfg~a~~~ 171 (720)
++|+|| ..|+|.++|..... ++++...++|+.+++.||+|||.. .||||||||+|||||.+.++||+|||+|+..
T Consensus 148 ~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~~ 227 (361)
T KOG1187|consen 148 LLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKLG 227 (361)
T ss_pred EEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCccCcccC
Confidence 999999 88999999955544 799999999999999999999984 3999999999999999999999888887322
Q ss_pred CC-CCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCCCcccccccccccccccccccc
Q 004989 172 GS-DSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDN 250 (720)
Q Consensus 172 g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~ 250 (720)
.. ..
T Consensus 228 ~~~~~--------------------------------------------------------------------------- 232 (361)
T KOG1187|consen 228 PEGDT--------------------------------------------------------------------------- 232 (361)
T ss_pred Ccccc---------------------------------------------------------------------------
Confidence 11 00
Q ss_pred ccchhhhhcccCCCCcccccc-ccCCcccCcccccCCCCCccccchhhhchhhhcccc---CCCCc------hHHHHHHH
Q 004989 251 RVNVEQVEEKKQPFPMKQILL-METNWYASPEELAGAPVSCASDIYRLGVLLFELFCP---FSTGE------EKTRTMSS 320 (720)
Q Consensus 251 g~~~~~~~~~~~~~~~~~~~~-~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLltp---f~~~~------~~~~~~~~ 320 (720)
..... .||.+|+|||.+..+..+.++|||||||+|.||+++ ..... -.......
T Consensus 233 ----------------~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~ 296 (361)
T KOG1187|consen 233 ----------------SVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPL 296 (361)
T ss_pred ----------------ceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHH
Confidence 00001 689999999999888899999999999999999993 22211 11111222
Q ss_pred hhc----CCCCcccc-ccCc--h----HHHHHHHcCCCCCCCCCChHHHHc
Q 004989 321 LRH----RVLPPQLL-LKFP--K----EASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 321 l~~----~~~p~~~~-~~~p--~----~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
+.. .++.|.+. ..++ + .+.+..+|++.+|..||++.|+++
T Consensus 297 ~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~ 347 (361)
T KOG1187|consen 297 LEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVK 347 (361)
T ss_pred HHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHH
Confidence 222 23445544 3443 2 237889999999999999999754
No 222
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.96 E-value=1.1e-28 Score=261.40 Aligned_cols=208 Identities=18% Similarity=0.217 Sum_probs=155.4
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCcee
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.+|..++.+++||||+++++.+. ... ....|++|||.+++|.+++......+++.+++.++.||+.||.|||++||+|
T Consensus 52 ~~e~~~l~~l~h~ni~~~~~~~~-~~~-~~~~~lv~e~~~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H 129 (293)
T cd07843 52 LREINILLKLQHPNIVTVKEVVV-GSN-LDKIYMVMEYVEHDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILH 129 (293)
T ss_pred HHHHHHHHhcCCCCEEEEEEEEE-ecC-CCcEEEEehhcCcCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeee
Confidence 46778899999999999999433 331 2368999999667999999655556999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccc
Q 004989 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
+||||+||+++.++.++|+|||.+...+.... .
T Consensus 130 ~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~--------------------------------~--------------- 162 (293)
T cd07843 130 RDLKTSNLLLNNRGILKICDFGLAREYGSPLK--------------------------------P--------------- 162 (293)
T ss_pred ccCCHHHEEECCCCcEEEeecCceeeccCCcc--------------------------------c---------------
Confidence 99999999999999999999998743321100 0
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC-CCccccchhhhchhhh
Q 004989 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFE 303 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGvll~e 303 (720)
.....+++.|+|||.+.+.. ++.++|||||||++|+
T Consensus 163 -------------------------------------------~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~ 199 (293)
T cd07843 163 -------------------------------------------YTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAE 199 (293)
T ss_pred -------------------------------------------cccccccccccCchhhcCCccccchhhHHHHHHHHHH
Confidence 00124688999999987654 6899999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhc--------------------C--------CCCcccccc--CchHHHHHHHcCCCCCC
Q 004989 304 LFC---PFSTGEEKTRTMSSLRH--------------------R--------VLPPQLLLK--FPKEASFCLWLLHPEPS 350 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~--------------------~--------~~p~~~~~~--~p~~~~Li~~~L~~dP~ 350 (720)
|++ ||............... . .+...+... .+...+||.+||+.+|+
T Consensus 200 l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~ 279 (293)
T cd07843 200 LLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPA 279 (293)
T ss_pred HHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCcc
Confidence 999 44433222111111000 0 000111111 23445999999999999
Q ss_pred CCCChHHHHcCccc
Q 004989 351 GRPKMGELLQSEFL 364 (720)
Q Consensus 351 ~Rpta~eiL~hp~~ 364 (720)
+|||+.|+|+||||
T Consensus 280 ~R~t~~ell~~~~f 293 (293)
T cd07843 280 KRISAEDALKHPYF 293 (293)
T ss_pred ccCCHHHHhcCCCC
Confidence 99999999999997
No 223
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=99.96 E-value=1e-28 Score=258.24 Aligned_cols=206 Identities=20% Similarity=0.264 Sum_probs=157.6
Q ss_pred hhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCcee
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|..++.+++||||+++++ ++.... .+++|||| .+++|.+++.+.+ .+++..++.++.||+.||.|||++|++|
T Consensus 57 ~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH~~~i~H 131 (272)
T cd06629 57 SEIETLKDLDHLNIVQYLG-FETTEE---YLSIFLEYVPGGSIGSCLRTYG-RFEEQLVRFFTEQVLEGLAYLHSKGILH 131 (272)
T ss_pred HHHHHHHhcCCCCcceEEE-EeccCC---ceEEEEecCCCCcHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHhhCCeee
Confidence 6778999999999999999 554443 57999999 8999999996553 5899999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccc
Q 004989 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||+|+||+++.++.++++|||.+....... ..
T Consensus 132 ~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~---------------------------------~~-------------- 164 (272)
T cd06629 132 RDLKADNLLVDADGICKISDFGISKKSDDIY---------------------------------DN-------------- 164 (272)
T ss_pred cCCChhhEEEcCCCeEEEeeccccccccccc---------------------------------cc--------------
Confidence 9999999999999999999998873321000 00
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC--CCccccchhhhchhh
Q 004989 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP--VSCASDIYRLGVLLF 302 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~--~s~~sDIwSLGvll~ 302 (720)
.......|+..|+|||.+.... ++.++|+||||+++|
T Consensus 165 -----------------------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~ 203 (272)
T cd06629 165 -----------------------------------------DQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVL 203 (272)
T ss_pred -----------------------------------------cccccccCCccccCHHHhccccCCCCccchhHHHHHHHH
Confidence 0001135788999999987654 789999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhc---CCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004989 303 ELFC---PFSTGEEKTRTMSSLRH---RVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~---~~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
+|++ ||............... ..+++......+ ...+|+.+||.++|..||++.++|+||||
T Consensus 204 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~ 272 (272)
T cd06629 204 EMFAGRRPWSDEEAIAAMFKLGNKRSAPPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQHPFI 272 (272)
T ss_pred HHHhCCCCCcCcchHHHHHHhhccccCCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhCCCC
Confidence 9999 55443333222221111 122222222333 44599999999999999999999999997
No 224
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=99.96 E-value=5.8e-29 Score=265.29 Aligned_cols=203 Identities=15% Similarity=0.150 Sum_probs=152.8
Q ss_pred hchhhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC---------------CCCCHHHHHH
Q 004989 63 RKHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---------------RSVDVYECLH 125 (720)
Q Consensus 63 r~~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~---------------~~l~~~~~~~ 125 (720)
+..+|..++.++ +||||+++++ ++..+. .+|++||| .+++|.+++.+.. ..+++..++.
T Consensus 53 ~~~~Ei~~l~~l~~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 128 (303)
T cd05088 53 DFAGELEVLCKLGHHPNIINLLG-ACEHRG---YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLH 128 (303)
T ss_pred HHHHHHHHHHHhcCCCCcceEEE-EECCCC---CceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHH
Confidence 334677788888 8999999999 554443 57999999 8999999995322 2478999999
Q ss_pred HHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcc
Q 004989 126 IFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRL 205 (720)
Q Consensus 126 i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 205 (720)
++.||+.||+|||++||+||||||+|||++.++.++|+|||++......
T Consensus 129 ~~~qi~~al~~LH~~gi~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~------------------------------- 177 (303)
T cd05088 129 FAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVY------------------------------- 177 (303)
T ss_pred HHHHHHHHHHHHHhCCccccccchheEEecCCCcEEeCccccCcccchh-------------------------------
Confidence 9999999999999999999999999999999999999998876311000
Q ss_pred cccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC
Q 004989 206 RREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG 285 (720)
Q Consensus 206 ~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 285 (720)
. ......++..|+|||.+.+
T Consensus 178 ------~------------------------------------------------------~~~~~~~~~~y~aPE~~~~ 197 (303)
T cd05088 178 ------V------------------------------------------------------KKTMGRLPVRWMAIESLNY 197 (303)
T ss_pred ------h------------------------------------------------------hcccCCCcccccCHHHHhc
Confidence 0 0000123567999999988
Q ss_pred CCCCccccchhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004989 286 APVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 286 ~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~h 361 (720)
..++.++|||||||++|||++ ||...... .....+.....++......+...+|+.+||+.+|++||++.+++++
T Consensus 198 ~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 276 (303)
T cd05088 198 SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA-ELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 276 (303)
T ss_pred cCCcccccchhhhhHHHHHHhcCCCCcccCChH-HHHHHHhcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 889999999999999999996 55443332 2333333222222222233555699999999999999999999874
No 225
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=99.96 E-value=1.1e-29 Score=251.30 Aligned_cols=201 Identities=18% Similarity=0.236 Sum_probs=163.4
Q ss_pred cccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCceeccCCC
Q 004989 71 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-QGIVVHNVRP 149 (720)
Q Consensus 71 L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs-~gIvHrDLKP 149 (720)
+...+.|.||+.|| +|..+. .+++.||..+.-+..+|+.-..+++|..+-++..-++.||.||-. +||||||+||
T Consensus 145 ~~s~dcpyIV~c~G-yFi~n~---dV~IcMelMs~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKP 220 (391)
T KOG0983|consen 145 LKSHDCPYIVQCFG-YFITNT---DVFICMELMSTCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKP 220 (391)
T ss_pred hhccCCCeeeeeee-EEeeCc---hHHHHHHHHHHHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCc
Confidence 33455899999999 444433 358899998778888887767779999999999999999999996 6999999999
Q ss_pred CcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCC
Q 004989 150 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 229 (720)
Q Consensus 150 ~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~ 229 (720)
+|||++..|++||||||++-.. .|- +
T Consensus 221 SNILlDe~GniKlCDFGIsGrl------------------------------------vdS---k--------------- 246 (391)
T KOG0983|consen 221 SNILLDERGNIKLCDFGISGRL------------------------------------VDS---K--------------- 246 (391)
T ss_pred cceEEccCCCEEeeccccccee------------------------------------ecc---c---------------
Confidence 9999999999999999987211 110 0
Q ss_pred CccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC---CCCccccchhhhchhhhccc
Q 004989 230 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA---PVSCASDIYRLGVLLFELFC 306 (720)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~---~~s~~sDIwSLGvll~eLlt 306 (720)
..+...|.+.|||||-+.-. .|+-.+||||||+.|+||.|
T Consensus 247 -------------------------------------AhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaT 289 (391)
T KOG0983|consen 247 -------------------------------------AHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELAT 289 (391)
T ss_pred -------------------------------------ccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhc
Confidence 01124689999999998544 39999999999999999999
Q ss_pred ---cCCCCchHHHHHHHhhcCCCCccccc---cCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 307 ---PFSTGEEKTRTMSSLRHRVLPPQLLL---KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 307 ---pf~~~~~~~~~~~~l~~~~~p~~~~~---~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
||........++..+.+. .||.+.. ..|...+|+..||.+|+.+||.-.++|+|||+...
T Consensus 290 g~yPy~~c~tdFe~ltkvln~-ePP~L~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~Fi~~y 355 (391)
T KOG0983|consen 290 GQYPYKGCKTDFEVLTKVLNE-EPPLLPGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEHPFIKRY 355 (391)
T ss_pred ccCCCCCCCccHHHHHHHHhc-CCCCCCcccCcCHHHHHHHHHHhhcCcccCcchHHHhcCcceeec
Confidence 888877777888777764 4454433 45778899999999999999999999999999886
No 226
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=99.96 E-value=5.9e-29 Score=261.35 Aligned_cols=207 Identities=16% Similarity=0.206 Sum_probs=158.9
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~-~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..|..+|..++||||+++++ .++... .+|++||| .+++|.+++.+.. ..+++.+++.++.||+.||.|||+.|+
T Consensus 41 ~~e~~~l~~l~~~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i 116 (277)
T cd05577 41 LNEKKILEKVSSRFIVSLAY-AFETKD---DLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRI 116 (277)
T ss_pred HHHHHHHHhCCCCCEeeeee-EEecCC---eEEEEEecCCCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 36778899999999999998 554443 67999999 8899999995433 358999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||+|+||+++.++.++|+|||.+...... ..
T Consensus 117 ~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~---------------------------------~~------------- 150 (277)
T cd05577 117 VYRDLKPENVLLDDHGNVRISDLGLAVELKGG---------------------------------KK------------- 150 (277)
T ss_pred ccCCCCHHHEEECCCCCEEEccCcchhhhccC---------------------------------Cc-------------
Confidence 99999999999999999999999876321100 00
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
.....++..|+|||.+.+..++.++|||||||++|
T Consensus 151 ---------------------------------------------~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~ 185 (277)
T cd05577 151 ---------------------------------------------IKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLY 185 (277)
T ss_pred ---------------------------------------------cccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHH
Confidence 00124678899999998888999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcC--CCCccccc-cCchHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC
Q 004989 303 ELFC---PFSTGEEKTRTMSSLRHR--VLPPQLLL-KFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 367 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~--~~p~~~~~-~~p~~~~Li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~ 367 (720)
+|++ ||....... ....+... ..+..... ..+...+||.+||+.||.+|| ++.+++.||||...
T Consensus 186 ~l~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h~~~~~~ 260 (277)
T cd05577 186 EMIAGRSPFRQRKEKV-EKEELKRRTLEMAVEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREHPLFKDL 260 (277)
T ss_pred HHhhCCCCCCCCcccc-cHHHHHhccccccccCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHhChhhhcC
Confidence 9999 665432210 11111111 11222222 234556999999999999999 88889999999865
No 227
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.96 E-value=4.2e-29 Score=271.58 Aligned_cols=212 Identities=16% Similarity=0.219 Sum_probs=158.3
Q ss_pred hchhhhhhcccCCCCCceecccceeecCC---CCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEA---AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~---~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
+..+|..++.+++||||+++++ ++.... ....+|+++++.|++|.+++... .+++..++.++.||+.||.|||+
T Consensus 62 ~~~~Ei~~l~~l~h~~iv~~~~-~~~~~~~~~~~~~~~lv~~~~~~~L~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~ 138 (345)
T cd07877 62 RTYRELRLLKHMKHENVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQILRGLKYIHS 138 (345)
T ss_pred HHHHHHHHHHHcCCCcccceee-eeeecccccccccEEEEehhcccCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH
Confidence 3446788999999999999999 443322 22347899999889999988543 38999999999999999999999
Q ss_pred CCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCC
Q 004989 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||+||||||+||+++.++.++|+|||++......
T Consensus 139 ~~ivH~dlkp~NIll~~~~~~kl~dfg~~~~~~~~--------------------------------------------- 173 (345)
T cd07877 139 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--------------------------------------------- 173 (345)
T ss_pred CCeeecCCChHHEEEcCCCCEEEeccccccccccc---------------------------------------------
Confidence 99999999999999999999999998876321000
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC-CCCCccccchhhh
Q 004989 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLG 298 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sDIwSLG 298 (720)
.....|+++|+|||.+.+ ..++.++||||||
T Consensus 174 ------------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG 205 (345)
T cd07877 174 ------------------------------------------------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVG 205 (345)
T ss_pred ------------------------------------------------ccccccCCCccCHHHHhCccCCCchhhHHHHH
Confidence 001356889999999876 4588999999999
Q ss_pred chhhhccc---cCCCCchHHHHHHHhhc-CC-----------------------CCc-c----ccccCchHHHHHHHcCC
Q 004989 299 VLLFELFC---PFSTGEEKTRTMSSLRH-RV-----------------------LPP-Q----LLLKFPKEASFCLWLLH 346 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~-~~-----------------------~p~-~----~~~~~p~~~~Li~~~L~ 346 (720)
|++|||++ ||............+.. .. .+. . +....+...+||.+||+
T Consensus 206 ~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~ 285 (345)
T cd07877 206 CIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 285 (345)
T ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcC
Confidence 99999998 55443322111111100 00 000 0 11223455699999999
Q ss_pred CCCCCCCChHHHHcCcccCCCccc
Q 004989 347 PEPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 347 ~dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
+||.+||++.++++||||.+...+
T Consensus 286 ~dp~~R~t~~e~l~h~~f~~~~~~ 309 (345)
T cd07877 286 LDSDKRITAAQALAHAYFAQYHDP 309 (345)
T ss_pred CChhhcCCHHHHhcChhhhhcCCC
Confidence 999999999999999999976443
No 228
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=99.96 E-value=1.1e-28 Score=259.85 Aligned_cols=204 Identities=15% Similarity=0.097 Sum_probs=154.8
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+...|...+++++||||+++++ ++... ..++++|| .+++|.+++......+++..++.++.||+.||.|||++|
T Consensus 55 ~~~~~~~~l~~l~h~~iv~~~~-~~~~~----~~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ 129 (279)
T cd05111 55 EITDHMLAMGSLDHAYIVRLLG-ICPGA----SLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHR 129 (279)
T ss_pred HHHHHHHHHhcCCCCCcceEEE-EECCC----ccEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3346777889999999999999 44322 35788999 899999999665566999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
++||||||+||+++.++.+||+|||.++....... ..
T Consensus 130 iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~~--------------------------------~~----------- 166 (279)
T cd05111 130 MVHRNLAARNILLKSDSIVQIADFGVADLLYPDDK--------------------------------KY----------- 166 (279)
T ss_pred EeccccCcceEEEcCCCcEEEcCCccceeccCCCc--------------------------------cc-----------
Confidence 99999999999999999999999988743211100 00
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......++..|+|||.+.+..++.++|||||||++
T Consensus 167 ---------------------------------------------~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il 201 (279)
T cd05111 167 ---------------------------------------------FYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTV 201 (279)
T ss_pred ---------------------------------------------ccCCCCCcccccCHHHhccCCcCchhhHHHHHHHH
Confidence 00012457789999999888899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||...... .....+..+..++..........+++.+||..||+.|||+.|+++
T Consensus 202 ~el~t~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~ 263 (279)
T cd05111 202 WEMMSYGAEPYAGMRPH-EVPDLLEKGERLAQPQICTIDVYMVMVKCWMIDENVRPTFKELAN 263 (279)
T ss_pred HHHHcCCCCCCCCCCHH-HHHHHHHCCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 99997 55443322 223333333333222222234569999999999999999999975
No 229
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=99.96 E-value=1.1e-28 Score=255.87 Aligned_cols=202 Identities=17% Similarity=0.203 Sum_probs=154.9
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..|..+|..++||||+++++ ++.... .++++||| .+++|.+++......+++..++.++.||+.||.|||++||+
T Consensus 47 ~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~ 122 (256)
T cd05114 47 IEEAKVMMKLSHPKLVQLYG-VCTQQK---PLYIVTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFI 122 (256)
T ss_pred HHHHHHHHHCCCCCceeEEE-EEccCC---CEEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 35777999999999999999 554443 57999999 89999999965444589999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+||+++.++.++++|||.+.........
T Consensus 123 H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~---------------------------------------------- 156 (256)
T cd05114 123 HRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYT---------------------------------------------- 156 (256)
T ss_pred ccccCcceEEEcCCCeEEECCCCCccccCCCcee----------------------------------------------
Confidence 9999999999999999999998877432111000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......++..|+|||.+.+..++.++|||||||++||
T Consensus 157 -------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~e 193 (256)
T cd05114 157 -------------------------------------------SSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWE 193 (256)
T ss_pred -------------------------------------------ccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHH
Confidence 0000134567999999988889999999999999999
Q ss_pred ccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 304 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 304 Llt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|++ ||...... .....+.....+.......+...+|+.+||..+|.+||++.++++
T Consensus 194 l~~~g~~p~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~ 253 (256)
T cd05114 194 VFTEGKMPFEKKSNY-EVVEMISRGFRLYRPKLASMTVYEVMYSCWHEKPEGRPTFAELLR 253 (256)
T ss_pred HHcCCCCCCCCCCHH-HHHHHHHCCCCCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 998 55444333 333444433222221122344569999999999999999999986
No 230
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=99.96 E-value=1.5e-28 Score=255.40 Aligned_cols=210 Identities=20% Similarity=0.245 Sum_probs=160.1
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
....|..++.+++||||+++++ ++... ..+++++|| .+++|.+++.+. ..+++..++.++.||+.||.|||+.|
T Consensus 45 ~~~~e~~~~~~l~~~~i~~~~~-~~~~~---~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~ 119 (264)
T cd06626 45 EIADEMKVLELLKHPNLVKYYG-VEVHR---EKVYIFMEYCSGGTLEELLEHG-RILDEHVIRVYTLQLLEGLAYLHSHG 119 (264)
T ss_pred HHHHHHHHHHhCCCCChhheee-eEecC---CEEEEEEecCCCCcHHHHHhhc-CCCChHHHHHHHHHHHHHHHHHHHCC
Confidence 4447777999999999999999 44333 368999999 899999999554 34899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+|+||+|+||+++.++.++|+|||.+.......... ..+
T Consensus 120 i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~-----------------------------~~~----------- 159 (264)
T cd06626 120 IVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTM-----------------------------GEE----------- 159 (264)
T ss_pred cccCCCCHHHEEECCCCCEEEcccccccccCCCCCcc-----------------------------ccc-----------
Confidence 9999999999999999999999999874432210000 000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC---CCccccchhhh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP---VSCASDIYRLG 298 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~---~s~~sDIwSLG 298 (720)
.....+++.|+|||.+.+.. ++.++||||||
T Consensus 160 ----------------------------------------------~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G 193 (264)
T cd06626 160 ----------------------------------------------VQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLG 193 (264)
T ss_pred ----------------------------------------------ccCCcCCcCccChhhccCCCCCCCCcccchHHHH
Confidence 00135688999999998766 89999999999
Q ss_pred chhhhccc---cCCCCchHHHHHHHhhcCCCCccccc---cCchHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004989 299 VLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL---KFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~---~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
|++|+|++ ||............+.... ++.++. ..+...+|+.+||+.+|.+|||+.+++.|||+
T Consensus 194 ~il~~l~~g~~pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~ 264 (264)
T cd06626 194 CVVLEMATGKRPWSELDNEFQIMFHVGAGH-KPPIPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQHPFV 264 (264)
T ss_pred HHHHHHHhCCCCccCCcchHHHHHHHhcCC-CCCCCcccccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 99999999 6654433323222233222 222222 24555699999999999999999999999996
No 231
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=99.96 E-value=9.7e-29 Score=261.33 Aligned_cols=204 Identities=19% Similarity=0.184 Sum_probs=156.0
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC------------CCCCHHHHHHHHHHH
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK------------RSVDVYECLHIFRQI 130 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~------------~~l~~~~~~~i~~QI 130 (720)
..+|..++.+++||||+++++ ++.... .++++||| .+++|.++|...+ ..+++..++.++.||
T Consensus 54 ~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql 129 (288)
T cd05093 54 FHREAELLTNLQHEHIVKFYG-VCVEGD---PLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQI 129 (288)
T ss_pred HHHHHHHHHhCCCCCcceEEE-EEecCC---ccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHH
Confidence 346778999999999999999 554433 57999999 8999999995322 248999999999999
Q ss_pred HHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhccccccc
Q 004989 131 VEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDL 210 (720)
Q Consensus 131 l~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Df 210 (720)
+.||+|||++||+||||||+||+++.++.++|+|||.+....... .
T Consensus 130 ~~aL~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~----------------------------------~ 175 (288)
T cd05093 130 AAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTD----------------------------------Y 175 (288)
T ss_pred HHHHHHHHhCCeeecccCcceEEEccCCcEEeccCCccccccCCc----------------------------------e
Confidence 999999999999999999999999999999999998874321110 0
Q ss_pred ccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCc
Q 004989 211 QLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSC 290 (720)
Q Consensus 211 gla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~ 290 (720)
........+++.|+|||.+.+..++.
T Consensus 176 ------------------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~ 201 (288)
T cd05093 176 ------------------------------------------------------YRVGGHTMLPIRWMPPESIMYRKFTT 201 (288)
T ss_pred ------------------------------------------------------eecCCCCCccccccCHHHhccCCCCc
Confidence 00000124577899999998888999
Q ss_pred cccchhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 291 ASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 291 ~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
++|||||||++|+|++ ||...... .....+.....++......+...+|+.+||++||.+|||+.+++.
T Consensus 202 ~sDiwslG~il~~l~t~g~~p~~~~~~~-~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~ 274 (288)
T cd05093 202 ESDVWSLGVVLWEIFTYGKQPWYQLSNN-EVIECITQGRVLQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHS 274 (288)
T ss_pred hhhHHHHHHHHHHHHhCCCCCCCCCCHH-HHHHHHHcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 9999999999999997 44443332 333444444333322233345669999999999999999999964
No 232
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=99.96 E-value=9.3e-29 Score=259.67 Aligned_cols=205 Identities=14% Similarity=0.101 Sum_probs=154.2
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC---------CCCCHHHHHHHHHHHHHH
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---------RSVDVYECLHIFRQIVEI 133 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~---------~~l~~~~~~~i~~QIl~a 133 (720)
..+|..++..++||||+++++ ++.... ..+++||| .+++|.+++.+.. ..++...+..++.||+.|
T Consensus 56 ~~~e~~~l~~l~~~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 131 (277)
T cd05062 56 FLNEASVMKEFNCHHVVRLLG-VVSQGQ---PTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADG 131 (277)
T ss_pred HHHHHHHHHhCCCCCeeeEEE-EEcCCC---CeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHH
Confidence 347778999999999999999 454333 57999999 9999999994321 235778899999999999
Q ss_pred HHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccc
Q 004989 134 VYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLV 213 (720)
Q Consensus 134 L~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla 213 (720)
|.|||+.|++||||||+||+++.++.++++|||++.........
T Consensus 132 l~~lH~~~~vH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~------------------------------------ 175 (277)
T cd05062 132 MAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY------------------------------------ 175 (277)
T ss_pred HHHHHHCCcccCCcchheEEEcCCCCEEECCCCCccccCCccee------------------------------------
Confidence 99999999999999999999999999999999887432111000
Q ss_pred cCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCcccc
Q 004989 214 TAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASD 293 (720)
Q Consensus 214 ~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sD 293 (720)
.......+++.|+|||++.+..++.++|
T Consensus 176 ----------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~D 203 (277)
T cd05062 176 ----------------------------------------------------RKGGKGLLPVRWMSPESLKDGVFTTYSD 203 (277)
T ss_pred ----------------------------------------------------ecCCCCccCHhhcChhHhhcCCcCchhH
Confidence 0000124577899999999888999999
Q ss_pred chhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004989 294 IYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 294 IwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~h 361 (720)
||||||++|||++ ||...... .....+.....++......+...+|+.+||+.+|++|||+.|++++
T Consensus 204 i~slG~~l~el~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 274 (277)
T cd05062 204 VWSFGVVLWEIATLAEQPYQGMSNE-QVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 274 (277)
T ss_pred HHHHHHHHHHHHcCCCCCCCCCCHH-HHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 9999999999997 55544332 3333333333332222223345699999999999999999999863
No 233
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.96 E-value=5.5e-29 Score=270.35 Aligned_cols=210 Identities=17% Similarity=0.207 Sum_probs=159.2
Q ss_pred hhhhhhcccCCCCCceecccceeecC--CCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENE--AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~--~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
.+|..+++.++||||+++++.+.... .....+++|+||.|++|.+++... .+++..++.++.||+.||.|||+.||
T Consensus 62 ~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~--~l~~~~~~~~~~ql~~aL~~LH~~gi 139 (343)
T cd07851 62 YRELRLLKHMDHENVIGLLDVFTPASSLEDFQDVYLVTHLMGADLNNIVKCQ--KLSDDHIQFLVYQILRGLKYIHSAGI 139 (343)
T ss_pred HHHHHHHHhccCCCHHHHHHHhhccccccccccEEEEEecCCCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 36788999999999999998443322 223358999999888999998542 49999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.++|+|||.+......
T Consensus 140 ~H~dlkp~Nill~~~~~~kL~dfg~~~~~~~~------------------------------------------------ 171 (343)
T cd07851 140 IHRDLKPSNIAVNEDCELKILDFGLARHTDDE------------------------------------------------ 171 (343)
T ss_pred ecCCCCHHHeEECCCCCEEEcccccccccccc------------------------------------------------
Confidence 99999999999999999999999887332100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC-CCCccccchhhhchh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLL 301 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGvll 301 (720)
.....++..|+|||.+.+. .++.++|||||||++
T Consensus 172 ---------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l 206 (343)
T cd07851 172 ---------------------------------------------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 206 (343)
T ss_pred ---------------------------------------------ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHH
Confidence 0013568899999998654 478999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhc--CCCCc----------------------------cccccCchHHHHHHHcCCCC
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRH--RVLPP----------------------------QLLLKFPKEASFCLWLLHPE 348 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~--~~~p~----------------------------~~~~~~p~~~~Li~~~L~~d 348 (720)
|||++ ||........ ...+.. +..++ ......+...+|+.+||..+
T Consensus 207 ~elltg~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~ 285 (343)
T cd07851 207 AELLTGKTLFPGSDHIDQ-LKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLD 285 (343)
T ss_pred HHHHhCCCCCCCCChHHH-HHHHHHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCC
Confidence 99999 5654433221 111111 00010 01112344559999999999
Q ss_pred CCCCCChHHHHcCcccCCCccc
Q 004989 349 PSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 349 P~~Rpta~eiL~hp~~~~~~~~ 370 (720)
|.+|||+.+|++||||......
T Consensus 286 P~~Rpt~~ell~h~~~~~~~~~ 307 (343)
T cd07851 286 PDKRITAAEALAHPYLAEYHDP 307 (343)
T ss_pred hhhCCCHHHHhcCCCccccCCC
Confidence 9999999999999999987544
No 234
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=99.96 E-value=6.7e-29 Score=269.17 Aligned_cols=205 Identities=18% Similarity=0.217 Sum_probs=154.8
Q ss_pred hhhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC---------------------------
Q 004989 65 HSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK--------------------------- 115 (720)
Q Consensus 65 ~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~--------------------------- 115 (720)
..|..++.++ +||||+++++.+...+ ..++++||| .+++|.++|....
T Consensus 58 ~~E~~~~~~l~~h~niv~~~~~~~~~~---~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (337)
T cd05054 58 MTELKILIHIGHHLNVVNLLGACTKPG---GPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLD 134 (337)
T ss_pred HHHHHHHHhhccCcchhheeeeEecCC---CCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccc
Confidence 3677788888 8999999999443332 257899999 9999999984311
Q ss_pred ---------------------------------CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEE
Q 004989 116 ---------------------------------RSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSF 162 (720)
Q Consensus 116 ---------------------------------~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkl 162 (720)
..+++..+..++.||+.||.|||++||+||||||+|||++.++.++|
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL 214 (337)
T cd05054 135 SVSSSQSSASSGFIEDKSLSDVEEDEEGDELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKI 214 (337)
T ss_pred cCCccccccccccccCcchhhcccchhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEE
Confidence 25789999999999999999999999999999999999999999999
Q ss_pred eecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCCCcccccccccccc
Q 004989 163 IESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGM 242 (720)
Q Consensus 163 iDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~ 242 (720)
+|||++........ .
T Consensus 215 ~DfG~a~~~~~~~~--------------------------------~--------------------------------- 229 (337)
T cd05054 215 CDFGLARDIYKDPD--------------------------------Y--------------------------------- 229 (337)
T ss_pred eccccchhcccCcc--------------------------------h---------------------------------
Confidence 99998743211000 0
Q ss_pred ccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhccc----cCCCCchHHHHH
Q 004989 243 QEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTM 318 (720)
Q Consensus 243 ~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~ 318 (720)
.......++..|+|||++.+..++.++|||||||++|||++ ||..........
T Consensus 230 -----------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~ 286 (337)
T cd05054 230 -----------------------VRKGDARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFC 286 (337)
T ss_pred -----------------------hhccCCCCCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHH
Confidence 00001245678999999999999999999999999999996 555433332333
Q ss_pred HHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 319 SSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 319 ~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
..+.....+.......+...+++.+||+.+|++||++.|+++
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~ 328 (337)
T cd05054 287 RRLKEGTRMRAPEYATPEIYSIMLDCWHNNPEDRPTFSELVE 328 (337)
T ss_pred HHHhccCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 344433333222233455679999999999999999999987
No 235
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.96 E-value=5.8e-29 Score=262.60 Aligned_cols=210 Identities=17% Similarity=0.156 Sum_probs=155.4
Q ss_pred hchhhhhhcccCC-CCCceecccceeecCCCCCcEEEEEecCCCCHHHHHh----CCCCCCCHHHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLD----KPKRSVDVYECLHIFRQIVEIVYAA 137 (720)
Q Consensus 63 r~~~e~~~L~~l~-HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~----~~~~~l~~~~~~~i~~QIl~aL~yL 137 (720)
+...|..++.++. ||||+++++. +..+. ..+++|||.+++|.++.. .....+++..+..++.|++.||+||
T Consensus 48 ~~~~e~~~l~~~~~~~~iv~~~~~-~~~~~---~~~~~~e~~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~l 123 (288)
T cd06616 48 RLLMDLDVVMRSSDCPYIVKFYGA-LFREG---DCWICMELMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYL 123 (288)
T ss_pred HHHHHHHHHHHhcCCCCEeeeeeE-EecCC---cEEEEEecccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHH
Confidence 3446777788886 9999999994 43332 578999997777766441 2335599999999999999999999
Q ss_pred HHC-CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCC
Q 004989 138 HSQ-GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 216 (720)
Q Consensus 138 Hs~-gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~ 216 (720)
|+. ||+||||||+||+++.++.++|+|||++.......
T Consensus 124 h~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~----------------------------------------- 162 (288)
T cd06616 124 KEELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSI----------------------------------------- 162 (288)
T ss_pred hhcCCeeccCCCHHHEEEccCCcEEEeecchhHHhccCC-----------------------------------------
Confidence 984 99999999999999999999999998873221100
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC---CCCcccc
Q 004989 217 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA---PVSCASD 293 (720)
Q Consensus 217 ~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~---~~s~~sD 293 (720)
......|++.|+|||++.+. .++.++|
T Consensus 163 --------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~D 192 (288)
T cd06616 163 --------------------------------------------------AKTRDAGCRPYMAPERIDPSARDGYDVRSD 192 (288)
T ss_pred --------------------------------------------------ccccccCccCccCHHHhccccccCCcchhh
Confidence 00012568889999999776 5899999
Q ss_pred chhhhchhhhccc---cCCCCchHHHHHHHhhcCCCCc---ccc-ccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCC
Q 004989 294 IYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPP---QLL-LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 366 (720)
Q Consensus 294 IwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~---~~~-~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~ 366 (720)
||||||++|||++ ||.........+..+.....+. ... ...+...+|+.+||+++|++|||+++++.||||..
T Consensus 193 i~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 272 (288)
T cd06616 193 VWSLGITLYEVATGKFPYPKWNSVFDQLTQVVKGDPPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEHPFIKD 272 (288)
T ss_pred hhHHHHHHHHHHhCCCCchhcchHHHHHhhhcCCCCCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhc
Confidence 9999999999998 5554433222223222222211 111 12334569999999999999999999999999987
Q ss_pred C
Q 004989 367 P 367 (720)
Q Consensus 367 ~ 367 (720)
.
T Consensus 273 ~ 273 (288)
T cd06616 273 Y 273 (288)
T ss_pred h
Confidence 5
No 236
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=99.96 E-value=1.1e-28 Score=256.13 Aligned_cols=202 Identities=17% Similarity=0.205 Sum_probs=154.7
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..++.+++||||+++++ ++.... ..|++||| .|++|.+++......+++..++.++.||+.||.|||++||+
T Consensus 47 ~~e~~~l~~l~~~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~ 122 (256)
T cd05059 47 IEEAKVMMKLSHPNLVQLYG-VCTKQR---PIFIVTEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFI 122 (256)
T ss_pred HHHHHHHHhCCCCCEEEEEE-EEcCCC---ceEEEEecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 35777899999999999999 444433 57999999 89999999965545689999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+||+++.++.++|+|||.+.........
T Consensus 123 H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~---------------------------------------------- 156 (256)
T cd05059 123 HRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYT---------------------------------------------- 156 (256)
T ss_pred cccccHhhEEECCCCcEEECCcccceeccccccc----------------------------------------------
Confidence 9999999999999999999998877432111000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......++..|+|||.+.+..++.++|||||||++||
T Consensus 157 -------------------------------------------~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~ 193 (256)
T cd05059 157 -------------------------------------------SSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWE 193 (256)
T ss_pred -------------------------------------------ccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHH
Confidence 0000123557999999998889999999999999999
Q ss_pred ccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 304 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 304 Llt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|++ ||...... .....+.....++......+...+++.+||+.+|++|||+.++++
T Consensus 194 l~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~ 253 (256)
T cd05059 194 VFSEGKMPYERFSNS-EVVESVSAGYRLYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLS 253 (256)
T ss_pred HhccCCCCCCCCCHH-HHHHHHHcCCcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 997 55443332 333444433222222223344559999999999999999999986
No 237
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=99.96 E-value=8.1e-29 Score=256.90 Aligned_cols=199 Identities=15% Similarity=0.145 Sum_probs=152.8
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~-~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
..+|..++++++||||+++++.++..+. .++++||| .+++|.+++.+.. ..+++..++.++.||+.||.|||++|
T Consensus 46 ~~~e~~~l~~l~~~~i~~~~~~~~~~~~---~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ 122 (256)
T cd05082 46 FLAEASVMTQLRHSNLVQLLGVIVEEKG---GLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANN 122 (256)
T ss_pred HHHHHHHHHhCCCCCeeeEEEEEEcCCC---ceEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3467779999999999999994444332 57999999 8899999995433 34889999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.+|++|||.+...... .
T Consensus 123 i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~---------------------------------~------------- 156 (256)
T cd05082 123 FVHRDLAARNVLVSEDNVAKVSDFGLTKEASST---------------------------------Q------------- 156 (256)
T ss_pred EeccccchheEEEcCCCcEEecCCccceecccc---------------------------------C-------------
Confidence 999999999999999999999999877321000 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
....++..|+|||++.+..++.++|||||||++
T Consensus 157 -----------------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~ 189 (256)
T cd05082 157 -----------------------------------------------DTGKLPVKWTAPEALREKKFSTKSDVWSFGILL 189 (256)
T ss_pred -----------------------------------------------CCCccceeecCHHHHccCCCCchhhhHHHHHHH
Confidence 001235679999999888899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||..... ......+.... ++...... +...+|+.+||+.+|++|||+.++++
T Consensus 190 ~~l~~~g~~p~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 251 (256)
T cd05082 190 WEIYSFGRVPYPRIPL-KDVVPRVEKGY-KMDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLRE 251 (256)
T ss_pred HHHHhCCCCCCCCCCH-HHHHHHHhcCC-CCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 99996 5544322 23333333332 22223333 44459999999999999999999975
No 238
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=99.96 E-value=7.1e-29 Score=266.16 Aligned_cols=204 Identities=15% Similarity=0.122 Sum_probs=156.3
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+...|..+++.++||||+++++ ++... ..++++|| .+++|.+++......+++..++.++.||+.||+|||++|
T Consensus 55 ~~~~e~~~l~~l~h~niv~~~g-~~~~~----~~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ 129 (316)
T cd05108 55 EILDEAYVMASVDNPHVCRLLG-ICLTS----TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERR 129 (316)
T ss_pred HHHHHHHHHHhCCCCCCCeEEE-EEcCC----CceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcC
Confidence 3446778999999999999999 44333 25788998 999999999766556899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||++......... +
T Consensus 130 iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~--------------------------------~----------- 166 (316)
T cd05108 130 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGADEKE--------------------------------Y----------- 166 (316)
T ss_pred eeccccchhheEecCCCcEEEccccccccccCCCcc--------------------------------e-----------
Confidence 999999999999999999999999988443211000 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......++..|+|||.+.+..++.++|||||||++
T Consensus 167 ---------------------------------------------~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l 201 (316)
T cd05108 167 ---------------------------------------------HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTV 201 (316)
T ss_pred ---------------------------------------------eccCCccceeecChHHhccCCCCchhhhHHHHHHH
Confidence 00001336679999999988899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||..... ......+.....++..........+++.+||..+|.+||++.+++.
T Consensus 202 ~el~t~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~ 263 (316)
T cd05108 202 WELMTFGSKPYDGIPA-SEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELII 263 (316)
T ss_pred HHHHcCCCCCCCCCCH-HHHHHHHhCCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 99986 5544322 2333333333333333333455669999999999999999999986
No 239
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.96 E-value=6.1e-29 Score=270.09 Aligned_cols=212 Identities=16% Similarity=0.236 Sum_probs=159.7
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCC---CCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAA---IDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~---~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
+..+|..+|.+++||||+++++ ++..... ...++++|||.|++|.+++.. ..+++..++.++.||+.||.|||+
T Consensus 60 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~--~~l~~~~~~~i~~qi~~al~~LH~ 136 (343)
T cd07880 60 RAYRELRLLKHMKHENVIGLLD-VFTPDLSLDRFHDFYLVMPFMGTDLGKLMKH--EKLSEDRIQFLVYQMLKGLKYIHA 136 (343)
T ss_pred HHHHHHHHHHhcCCCCccceee-eecCCccccccceEEEEEecCCCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh
Confidence 3447888999999999999999 4444332 234799999988899998854 348999999999999999999999
Q ss_pred CCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCC
Q 004989 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
.||+||||||+||+++.++.++++|||.+......
T Consensus 137 ~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~--------------------------------------------- 171 (343)
T cd07880 137 AGIIHRDLKPGNLAVNEDCELKILDFGLARQTDSE--------------------------------------------- 171 (343)
T ss_pred CCeecCCCCHHHEEEcCCCCEEEeecccccccccC---------------------------------------------
Confidence 99999999999999999999999999887321100
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC-CCCccccchhhh
Q 004989 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLG 298 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLG 298 (720)
.....+++.|+|||.+.+. .++.++||||||
T Consensus 172 ------------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG 203 (343)
T cd07880 172 ------------------------------------------------MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVG 203 (343)
T ss_pred ------------------------------------------------ccccccCCcccCHHHHhCCCCCCcHHHHHHHH
Confidence 0013568899999998763 488999999999
Q ss_pred chhhhccc---cCCCCchHHHHHHHhhcCCC-------------------------Ccc---c-cccCchHHHHHHHcCC
Q 004989 299 VLLFELFC---PFSTGEEKTRTMSSLRHRVL-------------------------PPQ---L-LLKFPKEASFCLWLLH 346 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~~-------------------------p~~---~-~~~~p~~~~Li~~~L~ 346 (720)
|++|+|++ ||............+..... +.. + ....+...++|.+||+
T Consensus 204 ~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~ 283 (343)
T cd07880 204 CIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLV 283 (343)
T ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcC
Confidence 99999999 56544332222211110000 000 1 1122345599999999
Q ss_pred CCCCCCCChHHHHcCcccCCCccc
Q 004989 347 PEPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 347 ~dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
.||.+|||+.+++.||||......
T Consensus 284 ~dP~~R~t~~~~l~~~~~~~~~~~ 307 (343)
T cd07880 284 LDAESRITAAEALAHPYFEEFHDP 307 (343)
T ss_pred CChhhCCCHHHHhcCccHhhhcCc
Confidence 999999999999999999987443
No 240
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=99.96 E-value=1.3e-28 Score=261.56 Aligned_cols=202 Identities=13% Similarity=0.106 Sum_probs=152.5
Q ss_pred hchhhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC---------------CCCCHHHHHH
Q 004989 63 RKHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---------------RSVDVYECLH 125 (720)
Q Consensus 63 r~~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~---------------~~l~~~~~~~ 125 (720)
+..+|..++.++ +||||+++++ ++.... .+|++||| .+++|.+++.+.. ..+++..++.
T Consensus 48 ~~~~E~~~l~~l~~hp~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 123 (297)
T cd05089 48 DFAGELEVLCKLGHHPNIINLLG-ACENRG---YLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQ 123 (297)
T ss_pred HHHHHHHHHHhhcCCCchhheEE-EEccCC---cceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHH
Confidence 344677788888 7999999999 444433 47999999 8899999994421 2488999999
Q ss_pred HHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcc
Q 004989 126 IFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRL 205 (720)
Q Consensus 126 i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 205 (720)
++.||+.||+|||++||+||||||+|||++.++.+||+|||++......
T Consensus 124 i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~------------------------------- 172 (297)
T cd05089 124 FASDVATGMQYLSEKQFIHRDLAARNVLVGENLASKIADFGLSRGEEVY------------------------------- 172 (297)
T ss_pred HHHHHHHHHHHHHHCCcccCcCCcceEEECCCCeEEECCcCCCccccce-------------------------------
Confidence 9999999999999999999999999999999999999998876311000
Q ss_pred cccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC
Q 004989 206 RREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG 285 (720)
Q Consensus 206 ~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 285 (720)
+ . ......+..|+|||.+.+
T Consensus 173 ----~--~------------------------------------------------------~~~~~~~~~y~aPE~~~~ 192 (297)
T cd05089 173 ----V--K------------------------------------------------------KTMGRLPVRWMAIESLNY 192 (297)
T ss_pred ----e--c------------------------------------------------------cCCCCcCccccCchhhcc
Confidence 0 0 000112456999999988
Q ss_pred CCCCccccchhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 286 APVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 286 ~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
..++.++|||||||++|||++ ||...... .....+..+..++......+...+|+.+||..+|.+||+++++++
T Consensus 193 ~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 270 (297)
T cd05089 193 SVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCA-ELYEKLPQGYRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISV 270 (297)
T ss_pred CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH-HHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 889999999999999999996 66554433 333344433332222223345569999999999999999999975
No 241
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=99.96 E-value=1.1e-28 Score=261.19 Aligned_cols=203 Identities=18% Similarity=0.201 Sum_probs=155.9
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC---------------CCCCHHHHHHHHH
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---------------RSVDVYECLHIFR 128 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~---------------~~l~~~~~~~i~~ 128 (720)
.+|..++++++||||+++++ ++.... ..++|||| .+++|.+++.... ..+++..++.++.
T Consensus 55 ~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 130 (291)
T cd05094 55 QREAELLTNLQHEHIVKFYG-VCGDGD---PLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIAS 130 (291)
T ss_pred HHHHHHHhcCCCCCcceEEE-EEccCC---ceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHH
Confidence 36777899999999999999 554443 57999999 8999999995422 2378999999999
Q ss_pred HHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhccccc
Q 004989 129 QIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRRE 208 (720)
Q Consensus 129 QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~ 208 (720)
||+.||.|||++||+||||||+||+++.++.++|+|||.+........
T Consensus 131 ~i~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~l~dfg~a~~~~~~~~-------------------------------- 178 (291)
T cd05094 131 QIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDY-------------------------------- 178 (291)
T ss_pred HHHHHHHHHHhCCeeecccCcceEEEccCCcEEECCCCcccccCCCce--------------------------------
Confidence 999999999999999999999999999999999999988743211100
Q ss_pred ccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCC
Q 004989 209 DLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV 288 (720)
Q Consensus 209 Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 288 (720)
. .......++..|+|||.+.+..+
T Consensus 179 -~-------------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~ 202 (291)
T cd05094 179 -Y-------------------------------------------------------RVGGHTMLPIRWMPPESIMYRKF 202 (291)
T ss_pred -e-------------------------------------------------------ecCCCCCcceeecChHHhccCCC
Confidence 0 00001346788999999998889
Q ss_pred Cccccchhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 289 SCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 289 s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
+.++|||||||++|||++ ||...... .....+.....+.......+...+|+.+||+.+|++||++.++++
T Consensus 203 ~~~~Di~slG~il~el~t~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~ 277 (291)
T cd05094 203 TTESDVWSFGVILWEIFTYGKQPWFQLSNT-EVIECITQGRVLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYK 277 (291)
T ss_pred CchhhHHHHHHHHHHHHhCCCCCCCCCCHH-HHHHHHhCCCCCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence 999999999999999997 44433332 334444444333322222344569999999999999999999975
No 242
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=99.96 E-value=5.4e-29 Score=261.45 Aligned_cols=207 Identities=17% Similarity=0.217 Sum_probs=159.9
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++++++||||+++++ ++.... .+|+|||| .+++|.+++.. ..+++..++.++.||+.||.|||++|
T Consensus 48 ~~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~ 121 (277)
T cd06642 48 DIQQEITVLSQCDSPYITRYYG-SYLKGT---KLWIIMEYLGGGSALDLLKP--GPLEETYIATILREILKGLDYLHSER 121 (277)
T ss_pred HHHHHHHHHHcCCCCccHhhhc-ccccCC---ceEEEEEccCCCcHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhcCC
Confidence 4457888999999999999999 444433 57999999 88999998854 34899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
++|+||+|+||+++.++.++++|||++....... .
T Consensus 122 ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~----------------------------------~----------- 156 (277)
T cd06642 122 KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ----------------------------------I----------- 156 (277)
T ss_pred eeccCCChheEEEeCCCCEEEccccccccccCcc----------------------------------h-----------
Confidence 9999999999999999999999988773221000 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......|+..|+|||.+.+..++.++|||||||++
T Consensus 157 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il 191 (277)
T cd06642 157 ---------------------------------------------KRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITA 191 (277)
T ss_pred ---------------------------------------------hhhcccCcccccCHHHhCcCCCchhhhHHHHHHHH
Confidence 00013578899999999888899999999999999
Q ss_pred hhccccCCC---CchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 302 FELFCPFST---GEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLltpf~~---~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|||+++..+ .... .....+... .++.+....+ ...+|+.+||+.+|.+||++.++++||||...
T Consensus 192 ~el~tg~~p~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 259 (277)
T cd06642 192 IELAKGEPPNSDLHPM-RVLFLIPKN-SPPTLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKHKFITRY 259 (277)
T ss_pred HHHHhCCCCCcccchh-hHHhhhhcC-CCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHhHHHHHH
Confidence 999994333 2221 112222222 2333333333 34599999999999999999999999998764
No 243
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=99.96 E-value=9.4e-29 Score=262.32 Aligned_cols=210 Identities=16% Similarity=0.225 Sum_probs=157.6
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCcee
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
..|..++.+++||||+++++ ++.+. ...++||||.+++|.+++......+++..++.++.||+.||.|||++||+|
T Consensus 50 ~~e~~~l~~~~h~~i~~~~~-~~~~~---~~~~lv~e~~~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H 125 (298)
T cd07841 50 LREIKLLQELKHPNIIGLLD-VFGHK---SNINLVFEFMETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILH 125 (298)
T ss_pred HHHHHHHhhcCCCCChhhhh-eeecC---CEEEEEEcccCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeee
Confidence 36777899999999999999 55443 267999999888999999655446999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccc
Q 004989 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
+||||+||+++.++.++|+|||.+...+....
T Consensus 126 ~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~------------------------------------------------ 157 (298)
T cd07841 126 RDLKPNNLLIASDGVLKLADFGLARSFGSPNR------------------------------------------------ 157 (298)
T ss_pred cCCChhhEEEcCCCCEEEccceeeeeccCCCc------------------------------------------------
Confidence 99999999999999999999888743321100
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC-CCCccccchhhhchhhh
Q 004989 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFE 303 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGvll~e 303 (720)
......+++.|+|||.+.+. .++.++|||||||++||
T Consensus 158 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e 195 (298)
T cd07841 158 ------------------------------------------KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAE 195 (298)
T ss_pred ------------------------------------------cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHH
Confidence 00012457889999998654 47899999999999999
Q ss_pred cccc---CCCCchHHHHHHHhhcCC-C---------------------Ccc-----ccccCchHHHHHHHcCCCCCCCCC
Q 004989 304 LFCP---FSTGEEKTRTMSSLRHRV-L---------------------PPQ-----LLLKFPKEASFCLWLLHPEPSGRP 353 (720)
Q Consensus 304 Lltp---f~~~~~~~~~~~~l~~~~-~---------------------p~~-----~~~~~p~~~~Li~~~L~~dP~~Rp 353 (720)
|+++ |...... .....+.... . ++. +........+||.+||.++|++||
T Consensus 196 ~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~ 274 (298)
T cd07841 196 LLLRVPFLPGDSDI-DQLGKIFEALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRI 274 (298)
T ss_pred HHcCCccccCCccH-HHHHHHHHHcCCCchhhhhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCc
Confidence 9993 3322221 1111111000 0 000 011123445899999999999999
Q ss_pred ChHHHHcCcccCCCcc
Q 004989 354 KMGELLQSEFLNEPRD 369 (720)
Q Consensus 354 ta~eiL~hp~~~~~~~ 369 (720)
|+.|+|.||||.+...
T Consensus 275 s~~e~l~~~~~~~~~~ 290 (298)
T cd07841 275 TARQALEHPYFSNDPA 290 (298)
T ss_pred CHHHHhhCccccCCCC
Confidence 9999999999998643
No 244
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=99.96 E-value=1.1e-28 Score=257.21 Aligned_cols=205 Identities=20% Similarity=0.261 Sum_probs=159.2
Q ss_pred hhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHh---CCCCCCCHHHHHHHHHHHHHHHHHH
Q 004989 62 LRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLD---KPKRSVDVYECLHIFRQIVEIVYAA 137 (720)
Q Consensus 62 ~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~---~~~~~l~~~~~~~i~~QIl~aL~yL 137 (720)
.+...|..+|++++||||+++++ ++.... ..+++||| .+++|.+++. .....+++..++.++.||+.||.||
T Consensus 47 ~~~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~L 122 (267)
T cd08228 47 QDCVKEIDLLKQLNHPNVIKYLD-SFIEDN---ELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHM 122 (267)
T ss_pred HHHHHHHHHHHhCCCcceeeeee-eEEECC---eEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHH
Confidence 34457888999999999999999 444432 57999999 8899999883 2334589999999999999999999
Q ss_pred HHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCC
Q 004989 138 HSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 138 Hs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~ 217 (720)
|++||+|+||||+||+++.++.++++|||.+........
T Consensus 123 H~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~~----------------------------------------- 161 (267)
T cd08228 123 HSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT----------------------------------------- 161 (267)
T ss_pred hhCCeeCCCCCHHHEEEcCCCCEEECccccceeccchhH-----------------------------------------
Confidence 999999999999999999999999999887733211000
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhh
Q 004989 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRL 297 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSL 297 (720)
......|++.|+|||.+.+..++.++|||||
T Consensus 162 -------------------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~Di~sl 192 (267)
T cd08228 162 -------------------------------------------------AAHSLVGTPYYMSPERIHENGYNFKSDIWSL 192 (267)
T ss_pred -------------------------------------------------HHhcCCCCccccChhhhccCCCCchhhHHHH
Confidence 0001357889999999988889999999999
Q ss_pred hchhhhccc---cCCCCc-hHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 298 GVLLFELFC---PFSTGE-EKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 298 Gvll~eLlt---pf~~~~-~~~~~~~~l~~~~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
||++|||++ ||.... ........+.....++......+ ...+|+.+||..+|++||++.++++
T Consensus 193 G~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~ 260 (267)
T cd08228 193 GCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDYPPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQ 260 (267)
T ss_pred HHHHHHHhcCCCCCccccccHHHHHHHHhcCCCCCCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHH
Confidence 999999999 554432 22334444444445554433343 4569999999999999999999986
No 245
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=99.96 E-value=1.6e-28 Score=253.89 Aligned_cols=206 Identities=20% Similarity=0.240 Sum_probs=159.6
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC--------CCCCCHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP--------KRSVDVYECLHIFRQIVEI 133 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~--------~~~l~~~~~~~i~~QIl~a 133 (720)
+..+|..++..++||||+++++ ++... ..++++||| .+++|.+++... ...+++..++.++.||+.|
T Consensus 42 ~~~~e~~~l~~~~~~~i~~~~~-~~~~~---~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a 117 (262)
T cd00192 42 DFLKEARVMKKLGHPNVVRLLG-VCTEE---EPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKG 117 (262)
T ss_pred HHHHHHHHHhhcCCCChheeee-eecCC---CceEEEEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHH
Confidence 3346777899999999999999 55443 368999999 799999999654 3569999999999999999
Q ss_pred HHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccc
Q 004989 134 VYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLV 213 (720)
Q Consensus 134 L~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla 213 (720)
|.|||++||+|+||||+||+++.++.++|+|||.+....... .+
T Consensus 118 l~~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~---------------------------------~~--- 161 (262)
T cd00192 118 MEYLASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDD---------------------------------YY--- 161 (262)
T ss_pred HHHHHcCCcccCccCcceEEECCCCcEEEccccccccccccc---------------------------------cc---
Confidence 999999999999999999999999999999998874432110 00
Q ss_pred cCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCcccc
Q 004989 214 TAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASD 293 (720)
Q Consensus 214 ~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sD 293 (720)
.......+++.|+|||.+.+..++.++|
T Consensus 162 ----------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~D 189 (262)
T cd00192 162 ----------------------------------------------------RKKTGGKLPIRWMAPESLKDGIFTSKSD 189 (262)
T ss_pred ----------------------------------------------------ccccCCCcCccccCHHHhccCCcchhhc
Confidence 0000134688899999998888999999
Q ss_pred chhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004989 294 IYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 294 IwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~h 361 (720)
||||||++|||++ ||..... ......+......+......+...+++.+||..+|.+|||+.+++++
T Consensus 190 i~slG~il~~l~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 260 (262)
T cd00192 190 VWSFGVLLWEIFTLGATPYPGLSN-EEVLEYLRKGYRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVER 260 (262)
T ss_pred cHHHHHHHHHHHhcCCCCCCCCCH-HHHHHHHHcCCCCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 9999999999997 4554432 23444444333332222334556699999999999999999999864
No 246
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.96 E-value=9.6e-29 Score=260.24 Aligned_cols=202 Identities=17% Similarity=0.212 Sum_probs=154.3
Q ss_pred hhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccC
Q 004989 69 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 147 (720)
Q Consensus 69 ~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDL 147 (720)
.++...+||||+++++ .+.... .+|+|||| .|++|.+++.+.+ .+++..++.++.|++.||.|||+.||+||||
T Consensus 49 ~~~~~~~~~~i~~~~~-~~~~~~---~~~~v~e~~~g~~L~~~l~~~~-~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di 123 (278)
T cd05606 49 SLVSTGDCPFIVCMSY-AFHTPD---KLSFILDLMNGGDLHYHLSQHG-VFSEAEMRFYAAEIILGLEHMHNRFVVYRDL 123 (278)
T ss_pred HHHHhCCCCcEeeeee-eeecCC---EEEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCEEcCCC
Confidence 3556678999999998 554443 57999999 8999999995543 5999999999999999999999999999999
Q ss_pred CCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccccccc
Q 004989 148 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 227 (720)
Q Consensus 148 KP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q 227 (720)
||+||+++.++.++|+|||.+......
T Consensus 124 ~p~nili~~~~~~kl~dfg~~~~~~~~----------------------------------------------------- 150 (278)
T cd05606 124 KPANILLDEHGHVRISDLGLACDFSKK----------------------------------------------------- 150 (278)
T ss_pred CHHHEEECCCCCEEEccCcCccccCcc-----------------------------------------------------
Confidence 999999999999999999887322100
Q ss_pred CCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC-CCCccccchhhhchhhhccc
Q 004989 228 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFELFC 306 (720)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGvll~eLlt 306 (720)
......|+..|+|||.+.+. .++.++||||+||++|||++
T Consensus 151 ---------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~ 191 (278)
T cd05606 151 ---------------------------------------KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLR 191 (278)
T ss_pred ---------------------------------------CCcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHh
Confidence 00013578999999999754 58999999999999999999
Q ss_pred ---cCCCCchH-HHHHHHhhcCCCCcccccc-CchHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCCc
Q 004989 307 ---PFSTGEEK-TRTMSSLRHRVLPPQLLLK-FPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEPR 368 (720)
Q Consensus 307 ---pf~~~~~~-~~~~~~l~~~~~p~~~~~~-~p~~~~Li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~~ 368 (720)
||...... .......... .++.++.. .+...+++.+||..+|.+|| ++.++++||||....
T Consensus 192 g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~~~~~~~ 262 (278)
T cd05606 192 GHSPFRQHKTKDKHEIDRMTLT-MAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFFRSLD 262 (278)
T ss_pred CCCCCCCCCccchHHHHHHhhc-cCCCCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCccccCCC
Confidence 56543111 1111111111 12222222 34556999999999999999 999999999998863
No 247
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.96 E-value=4.3e-29 Score=256.59 Aligned_cols=195 Identities=17% Similarity=0.150 Sum_probs=146.9
Q ss_pred hhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccC
Q 004989 69 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 147 (720)
Q Consensus 69 ~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDL 147 (720)
..+....||||+++++ ++... ..+|++||| .|++|.+++.+.. .+++..+..++.||+.||.|||++||+||||
T Consensus 37 ~~~~~~~~~~i~~~~~-~~~~~---~~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dl 111 (237)
T cd05576 37 LTIIPHCVPNMVCLHK-YIVSE---DSVFLVLQHAEGGKLWSHISKFL-NIPEECVKRWAAEMVVALDALHREGIVCRDL 111 (237)
T ss_pred HHHHhcCCCceeehhh-heecC---CeEEEEEecCCCCCHHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHhCCeeccCC
Confidence 3444567999999999 44433 268999999 8999999995543 4999999999999999999999999999999
Q ss_pred CCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccccccc
Q 004989 148 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 227 (720)
Q Consensus 148 KP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q 227 (720)
||+||+++.++.++++|||.+...+...
T Consensus 112 kp~Nil~~~~~~~~l~df~~~~~~~~~~---------------------------------------------------- 139 (237)
T cd05576 112 NPNNILLDDRGHIQLTYFSRWSEVEDSC---------------------------------------------------- 139 (237)
T ss_pred CHHHEEEcCCCCEEEecccchhcccccc----------------------------------------------------
Confidence 9999999999999999988663211000
Q ss_pred CCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhcccc
Q 004989 228 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFCP 307 (720)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLltp 307 (720)
....++..|+|||.+.+..++.++||||+||++|||+++
T Consensus 140 -----------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g 178 (237)
T cd05576 140 -----------------------------------------DGEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTG 178 (237)
T ss_pred -----------------------------------------ccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHC
Confidence 002346779999999888899999999999999999995
Q ss_pred CCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCCh-----HHHHcCccc
Q 004989 308 FSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM-----GELLQSEFL 364 (720)
Q Consensus 308 f~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta-----~eiL~hp~~ 364 (720)
..................+|+. ..+...+||.+||+.||++||++ ++++.||||
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h~~~ 237 (237)
T cd05576 179 KTLVECHPSGINTHTTLNIPEW---VSEEARSLLQQLLQFNPTERLGAGVAGVEDIKSHPFF 237 (237)
T ss_pred cchhhcCchhcccccccCCccc---CCHHHHHHHHHHccCCHHHhcCCCccchHHHHcCCCC
Confidence 4322111000000000111211 23455699999999999999986 999999997
No 248
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.96 E-value=9.4e-29 Score=267.18 Aligned_cols=220 Identities=15% Similarity=0.140 Sum_probs=159.4
Q ss_pred chhhhhhcccC-CCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++.++ +||||+++++...........+|++|||.+++|.+++... ..+++..++.++.||+.||.|||++||
T Consensus 48 ~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~e~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~gi 126 (332)
T cd07857 48 ALRELKLLRHFRGHKNITCLYDMDIVFPGNFNELYLYEELMEADLHQIIRSG-QPLTDAHFQSFIYQILCGLKYIHSANV 126 (332)
T ss_pred HHHHHHHHHHhcCCCChheeeeeeeeccccCCcEEEEEecccCCHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 34677788888 5999999998443333334468999999778999999543 459999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.++|+|||.+......... ..
T Consensus 127 vH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~-------------------------------~~------------ 163 (332)
T cd07857 127 LHRDLKPGNLLVNADCELKICDFGLARGFSENPGE-------------------------------NA------------ 163 (332)
T ss_pred ccCCCCHHHeEEcCCCCEEeCcCCCceeccccccc-------------------------------cc------------
Confidence 99999999999999999999999988443111000 00
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC-CCCCccccchhhhchh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLL 301 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sDIwSLGvll 301 (720)
.......||+.|+|||.+.+ ..++.++|||||||++
T Consensus 164 -------------------------------------------~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l 200 (332)
T cd07857 164 -------------------------------------------GFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCIL 200 (332)
T ss_pred -------------------------------------------ccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHH
Confidence 00011468999999998866 4589999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhh-----------------------c--CCCCc----cccccCchHHHHHHHcCCCCC
Q 004989 302 FELFC---PFSTGEEKTRTMSSLR-----------------------H--RVLPP----QLLLKFPKEASFCLWLLHPEP 349 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~-----------------------~--~~~p~----~~~~~~p~~~~Li~~~L~~dP 349 (720)
|+|++ ||............+. . ..... ......+...+|+.+||++||
T Consensus 201 ~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P 280 (332)
T cd07857 201 AELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDP 280 (332)
T ss_pred HHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCc
Confidence 99998 4543322111000000 0 00001 111123455699999999999
Q ss_pred CCCCChHHHHcCcccCCCccc
Q 004989 350 SGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 350 ~~Rpta~eiL~hp~~~~~~~~ 370 (720)
.+|||+.+++.||||....++
T Consensus 281 ~~R~t~~~ll~~~~~~~~~~~ 301 (332)
T cd07857 281 TKRISVEEALEHPYLAIWHDP 301 (332)
T ss_pred ccCCCHHHHhcChhhhhhcCc
Confidence 999999999999999866443
No 249
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=99.96 E-value=8.9e-29 Score=257.22 Aligned_cols=202 Identities=17% Similarity=0.215 Sum_probs=148.7
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..|..++..++||||+++++ ++..+. ..+++||| .+++|.+++......+++..++.++.||+.||.|||++||+
T Consensus 47 ~~e~~~l~~~~h~~iv~~~~-~~~~~~---~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ii 122 (258)
T cd05078 47 FEAASMMSQLSHKHLVLNYG-VCVCGD---ESIMVQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLT 122 (258)
T ss_pred HHHHHHHHhCCCCChhheee-EEEeCC---CcEEEEecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 35677889999999999999 444433 46899999 89999999966555689999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+||+++.++..++.+++.. +++|||++.....
T Consensus 123 H~dlkp~nili~~~~~~~~~~~~~~-------------------------------------~l~d~g~~~~~~~----- 160 (258)
T cd05078 123 HGNVCAKNVLLIREEDRKTGNPPFI-------------------------------------KLSDPGISITVLP----- 160 (258)
T ss_pred cCCCccceEEEecccccccCCCceE-------------------------------------EecccccccccCC-----
Confidence 9999999999998776544332221 2345544321110
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC-CCCccccchhhhchhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLF 302 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGvll~ 302 (720)
.....+++.|+|||++.+. .++.++|||||||++|
T Consensus 161 --------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~ 196 (258)
T cd05078 161 --------------------------------------------KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLW 196 (258)
T ss_pred --------------------------------------------chhccccCCccCchhccCCCCCCchhhHHHHHHHHH
Confidence 0013567889999999874 4799999999999999
Q ss_pred hcccc----CCCCchHHHHHHHhhc-CCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 303 ELFCP----FSTGEEKTRTMSSLRH-RVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 303 eLltp----f~~~~~~~~~~~~l~~-~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
||+++ |...... ........ ..+|+ ..+++..+|+.+||+.||++|||+++|++
T Consensus 197 ~l~~g~~~~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~li~~~l~~~p~~Rps~~~il~ 255 (258)
T cd05078 197 EIFSGGDKPLSALDSQ-KKLQFYEDRHQLPA---PKWTELANLINQCMDYEPDFRPSFRAIIR 255 (258)
T ss_pred HHHcCCCCChhhccHH-HHHHHHHccccCCC---CCcHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 99993 2222221 11211111 12222 34466779999999999999999999986
No 250
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.96 E-value=1.2e-28 Score=259.55 Aligned_cols=206 Identities=22% Similarity=0.230 Sum_probs=157.7
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC----------------CCCCCHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP----------------KRSVDVYECLH 125 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~----------------~~~l~~~~~~~ 125 (720)
+..+|..++++++||||+++++ ++..+. ..|++||| .+++|.+++... ...+++..+..
T Consensus 53 ~~~~E~~~l~~l~h~niv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (283)
T cd05090 53 EFQQEASLMAELHHPNIVCLLG-VVTQEQ---PVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLH 128 (283)
T ss_pred HHHHHHHHHhhCCCCCeeeEEE-EEecCC---ceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHH
Confidence 3446788999999999999999 444443 57999999 889999998422 12478899999
Q ss_pred HHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcc
Q 004989 126 IFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRL 205 (720)
Q Consensus 126 i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 205 (720)
++.||+.||.|||++||+||||||+|||++.++.++|+|||++......
T Consensus 129 i~~~i~~al~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~------------------------------- 177 (283)
T cd05090 129 IAIQIAAGMEYLSSHFFVHKDLAARNILIGEQLHVKISDLGLSREIYSA------------------------------- 177 (283)
T ss_pred HHHHHHHHHHHHHhcCeehhccccceEEEcCCCcEEeccccccccccCC-------------------------------
Confidence 9999999999999999999999999999999999999999887432111
Q ss_pred cccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC
Q 004989 206 RREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG 285 (720)
Q Consensus 206 ~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 285 (720)
++.. ......++..|+|||.+.+
T Consensus 178 ---~~~~------------------------------------------------------~~~~~~~~~~y~aPE~~~~ 200 (283)
T cd05090 178 ---DYYR------------------------------------------------------VQPKSLLPIRWMPPEAIMY 200 (283)
T ss_pred ---ccee------------------------------------------------------cccCCCccceecChHHhcc
Confidence 0000 0001235678999999988
Q ss_pred CCCCccccchhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004989 286 APVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 286 ~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~h 361 (720)
..++.++|||||||++|||++ ||..... ...+..+.....++......+...+++.+||+.||.+||++.+|+++
T Consensus 201 ~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~ 279 (283)
T cd05090 201 GKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSN-QEVIEMVRKRQLLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTR 279 (283)
T ss_pred CCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH-HHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence 889999999999999999997 5655433 24445555444443333334555699999999999999999999863
No 251
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=99.96 E-value=1.8e-28 Score=258.68 Aligned_cols=209 Identities=17% Similarity=0.143 Sum_probs=154.9
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|+++.||||+++++ ++... ....++++||| .|++|.+++.+....+++..+..++.||+.||.|||++|
T Consensus 52 ~~~~e~~~l~~l~h~~i~~~~~-~~~~~-~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~g 129 (284)
T cd05079 52 DLKKEIEILRNLYHENIVKYKG-ICTED-GGNGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQ 129 (284)
T ss_pred HHHHHHHHHHhCCCCCeeeeee-EEecC-CCCceEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 4557888999999999999999 44433 12357999999 899999999655456899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.++|+|||.+........ .
T Consensus 130 i~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~---------------------------------~----------- 165 (284)
T cd05079 130 YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKE---------------------------------Y----------- 165 (284)
T ss_pred eeecccchheEEEcCCCCEEECCCccccccccCcc---------------------------------c-----------
Confidence 99999999999999999999999888743211100 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
. . ......++..|+|||.+.+..++.++|||||||++
T Consensus 166 -~----------------------~--------------------~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il 202 (284)
T cd05079 166 -Y----------------------T--------------------VKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTL 202 (284)
T ss_pred -e----------------------e--------------------ecCCCCCCccccCHHHhccCCCCccccchhhhhhh
Confidence 0 0 00012457789999999888899999999999999
Q ss_pred hhccccCCCC-----------------chHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFCPFSTG-----------------EEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLltpf~~~-----------------~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||+++..+. .........+......+......+...+|+.+||+.+|.+|||+.++++
T Consensus 203 ~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 278 (284)
T cd05079 203 YELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIE 278 (284)
T ss_pred hhhhcCCCCCccccchhhhhcccccccccHHHHHHHHHcCccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 9999821111 0011111222222222222233455669999999999999999999986
No 252
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=99.96 E-value=1.4e-28 Score=258.84 Aligned_cols=205 Identities=17% Similarity=0.232 Sum_probs=153.4
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..|..++.+++||||+++++ .+.... .++++||| .+++|..++... ..+++..++.++.||+.||.|||++||+
T Consensus 48 ~~e~~~l~~~~h~~i~~~~~-~~~~~~---~~~~v~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~ql~~~l~~LH~~~i~ 122 (286)
T cd07847 48 LREIRMLKQLKHPNLVNLIE-VFRRKR---KLHLVFEYCDHTVLNELEKNP-RGVPEHLIKKIIWQTLQAVNFCHKHNCI 122 (286)
T ss_pred HHHHHHHHhCCCCCEeeeee-EEeeCC---EEEEEEeccCccHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCce
Confidence 36777999999999999999 554443 57999999 777777766443 3599999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+||+++.++.++|+|||.+........
T Consensus 123 H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~----------------------------------------------- 155 (286)
T cd07847 123 HRDVKPENILITKQGQIKLCDFGFARILTGPGD----------------------------------------------- 155 (286)
T ss_pred ecCCChhhEEEcCCCcEEECccccceecCCCcc-----------------------------------------------
Confidence 999999999999999999999888733211000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC-CCCccccchhhhchhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLF 302 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGvll~ 302 (720)
......++.+|+|||.+.+. .++.++|||||||++|
T Consensus 156 -------------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~ 192 (286)
T cd07847 156 -------------------------------------------DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFA 192 (286)
T ss_pred -------------------------------------------cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHH
Confidence 00013468899999998764 4789999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhh--cC------------------CCCc-c--------ccccCchHHHHHHHcCCCCCC
Q 004989 303 ELFC---PFSTGEEKTRTMSSLR--HR------------------VLPP-Q--------LLLKFPKEASFCLWLLHPEPS 350 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~--~~------------------~~p~-~--------~~~~~p~~~~Li~~~L~~dP~ 350 (720)
||++ ||.............. .. ..|. . +....+...+|+.+||+++|+
T Consensus 193 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~ 272 (286)
T cd07847 193 ELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPT 272 (286)
T ss_pred HHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCcc
Confidence 9999 5654433322221110 00 0000 0 111223345999999999999
Q ss_pred CCCChHHHHcCccc
Q 004989 351 GRPKMGELLQSEFL 364 (720)
Q Consensus 351 ~Rpta~eiL~hp~~ 364 (720)
+||++.|++.||||
T Consensus 273 ~Rp~~~eil~~~~f 286 (286)
T cd07847 273 ERLSCEELLEHPYF 286 (286)
T ss_pred ccCCHHHHhcCCCC
Confidence 99999999999997
No 253
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=99.96 E-value=1.3e-28 Score=258.41 Aligned_cols=204 Identities=17% Similarity=0.167 Sum_probs=156.7
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC-------------CCCCHHHHHHHHHH
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-------------RSVDVYECLHIFRQ 129 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~-------------~~l~~~~~~~i~~Q 129 (720)
..+|..+|..++||||+++++ ++... ...+++||| .+++|.++|...+ ..+++..+..++.|
T Consensus 55 ~~~e~~~l~~l~~~~i~~~~~-~~~~~---~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 130 (280)
T cd05049 55 FEREAELLTNFQHENIVKFYG-VCTEG---DPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQ 130 (280)
T ss_pred HHHHHHHHHhcCCCCchheee-EEecC---CCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHH
Confidence 346777899999999999999 44444 367999999 9999999995432 34788999999999
Q ss_pred HHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccc
Q 004989 130 IVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRRED 209 (720)
Q Consensus 130 Il~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~D 209 (720)
|+.||.|||++|++||||||+||+++.++.++|+|||.+....... .
T Consensus 131 i~~~l~~lH~~~i~h~dlkp~nili~~~~~~kl~d~g~~~~~~~~~---------------------------------~ 177 (280)
T cd05049 131 IASGMVYLASQHFVHRDLATRNCLVGYDLVVKIGDFGMSRDVYTTD---------------------------------Y 177 (280)
T ss_pred HHHHHHHHhhCCeeccccccceEEEcCCCeEEECCcccceecccCc---------------------------------c
Confidence 9999999999999999999999999999999999998874321110 0
Q ss_pred cccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCC
Q 004989 210 LQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVS 289 (720)
Q Consensus 210 fgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s 289 (720)
+. ......+++.|+|||++.+..++
T Consensus 178 ~~-------------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~ 202 (280)
T cd05049 178 YR-------------------------------------------------------VGGHTMLPIRWMPPESIMYRKFT 202 (280)
T ss_pred ee-------------------------------------------------------cCCCCcccceecChhhhccCCcc
Confidence 00 00012457889999999998899
Q ss_pred ccccchhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 290 CASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 290 ~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
.++|||||||++|||++ ||...... .....+..+..++......+...+|+.+||..||.+||++.|+++
T Consensus 203 ~~~Di~slG~il~e~~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 276 (280)
T cd05049 203 TESDVWSFGVVLWEIFTYGKQPWYGLSNE-EVIECITQGRLLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHE 276 (280)
T ss_pred hhhhHHHHHHHHHHHHhcCCCCCCCCCHH-HHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 99999999999999997 55443332 344444444443332233345569999999999999999999985
No 254
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=99.96 E-value=1.5e-28 Score=260.01 Aligned_cols=206 Identities=17% Similarity=0.186 Sum_probs=157.2
Q ss_pred hchhhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC---------------CCCCCCHHHHHH
Q 004989 63 RKHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK---------------PKRSVDVYECLH 125 (720)
Q Consensus 63 r~~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~---------------~~~~l~~~~~~~ 125 (720)
+..+|..++.++ +||||+++++ ++.... .++++||| .+++|.+++.. ....+++..++.
T Consensus 61 ~~~~E~~~l~~l~~h~~i~~~~~-~~~~~~---~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 136 (293)
T cd05053 61 DLVSEMEMMKMIGKHKNIINLLG-VCTQEG---PLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVS 136 (293)
T ss_pred HHHHHHHHHHhhcCCCCeeeEEE-EEcCCC---CeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHH
Confidence 344677788888 8999999999 444432 57999999 89999999942 234589999999
Q ss_pred HHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcc
Q 004989 126 IFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRL 205 (720)
Q Consensus 126 i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 205 (720)
++.||+.||+|||+.||+||||||+||+++.++.++|+|||.+.........
T Consensus 137 i~~qi~~al~~LH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~---------------------------- 188 (293)
T cd05053 137 FAYQVARGMEFLASKKCIHRDLAARNVLVTEDHVMKIADFGLARDIHHIDYY---------------------------- 188 (293)
T ss_pred HHHHHHHHHHHHHHCCccccccceeeEEEcCCCeEEeCccccccccccccce----------------------------
Confidence 9999999999999999999999999999999999999999887432111000
Q ss_pred cccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC
Q 004989 206 RREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG 285 (720)
Q Consensus 206 ~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 285 (720)
. ......++..|+|||++.+
T Consensus 189 ----------------------------------------~--------------------~~~~~~~~~~y~aPE~~~~ 208 (293)
T cd05053 189 ----------------------------------------R--------------------KTTNGRLPVKWMAPEALFD 208 (293)
T ss_pred ----------------------------------------e--------------------ccCCCCCCccccCHHHhcc
Confidence 0 0000123567999999988
Q ss_pred CCCCccccchhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004989 286 APVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 286 ~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~h 361 (720)
..++.++|||||||++|||++ ||..... ......+.....++......+...+|+.+||.++|.+|||+.|++++
T Consensus 209 ~~~~~~~Di~slG~il~el~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~ 287 (293)
T cd05053 209 RVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPV-EELFKLLKEGYRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVED 287 (293)
T ss_pred CCcCcccceeehhhHHHHHhcCCCCCCCCCCH-HHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence 889999999999999999987 5554433 23444444444333333344556699999999999999999999873
No 255
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.96 E-value=1.3e-28 Score=255.66 Aligned_cols=199 Identities=16% Similarity=0.246 Sum_probs=155.5
Q ss_pred hhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccC
Q 004989 69 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 147 (720)
Q Consensus 69 ~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDL 147 (720)
.+....+||||+++++ .+.... .+|++||| .|++|.+++.... .+++..+..++.||+.||.|||+.||+|+||
T Consensus 49 ~~~~~~~~~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl 123 (260)
T cd05611 49 IMMIQGESPYVAKLYY-SFQSKD---YLYLVMEYLNGGDCASLIKTLG-GLPEDWAKQYIAEVVLGVEDLHQRGIIHRDI 123 (260)
T ss_pred HHhhcCCCCCeeeeee-eEEcCC---eEEEEEeccCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCC
Confidence 3455679999999999 454433 67999999 8999999995543 4899999999999999999999999999999
Q ss_pred CCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccccccc
Q 004989 148 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 227 (720)
Q Consensus 148 KP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q 227 (720)
+|+||+++.++.++|+|||.+......
T Consensus 124 ~p~nil~~~~~~~~l~dfg~~~~~~~~----------------------------------------------------- 150 (260)
T cd05611 124 KPENLLIDQTGHLKLTDFGLSRNGLEN----------------------------------------------------- 150 (260)
T ss_pred CHHHeEECCCCcEEEeecccceecccc-----------------------------------------------------
Confidence 999999999999999998876321000
Q ss_pred CCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhccc-
Q 004989 228 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 306 (720)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt- 306 (720)
....|++.|+|||.+.+..++.++||||||+++|+|++
T Consensus 151 -----------------------------------------~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g 189 (260)
T cd05611 151 -----------------------------------------KKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFG 189 (260)
T ss_pred -----------------------------------------ccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHC
Confidence 01356888999999988888999999999999999998
Q ss_pred --cCCCCchHHHHHHHhhcC--CCCccccccC-chHHHHHHHcCCCCCCCCCCh---HHHHcCcccCCC
Q 004989 307 --PFSTGEEKTRTMSSLRHR--VLPPQLLLKF-PKEASFCLWLLHPEPSGRPKM---GELLQSEFLNEP 367 (720)
Q Consensus 307 --pf~~~~~~~~~~~~l~~~--~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta---~eiL~hp~~~~~ 367 (720)
||...... .....+... ..++...... +...+||.+||+.+|++||++ .|+|.||||...
T Consensus 190 ~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~~~~~~~ 257 (260)
T cd05611 190 YPPFHAETPD-AVFDNILSRRINWPEEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKSHPFFKSI 257 (260)
T ss_pred CCCCCCCCHH-HHHHHHHhcccCCCCcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHcChHhhcC
Confidence 66554433 233333222 2233333233 445699999999999999954 799999999765
No 256
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.96 E-value=7.6e-29 Score=258.57 Aligned_cols=203 Identities=16% Similarity=0.219 Sum_probs=153.1
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..++.+++||||+++++ .+.... .+|+|||| .+++|.+++... ..+++..+..++.||+.||.|||+.||+
T Consensus 54 ~~e~~~l~~~~h~~ii~~~~-~~~~~~---~~~iv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~ 128 (267)
T cd06646 54 QQEIFMVKECKHCNIVAYFG-SYLSRE---KLWICMEYCGGGSLQDIYHVT-GPLSELQIAYVCRETLQGLAYLHSKGKM 128 (267)
T ss_pred HHHHHHHHhcCCCCeeeeeE-EEEeCC---EEEEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 36778999999999999999 444432 57999999 889999998544 3589999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+||+++.++.++|+|||.+........
T Consensus 129 H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~----------------------------------------------- 161 (267)
T cd06646 129 HRDIKGANILLTDNGDVKLADFGVAAKITATIA----------------------------------------------- 161 (267)
T ss_pred ccCCCHHHEEECCCCCEEECcCccceeeccccc-----------------------------------------------
Confidence 999999999999999999999988733211000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC---CCCCccccchhhhch
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG---APVSCASDIYRLGVL 300 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~---~~~s~~sDIwSLGvl 300 (720)
......|++.|+|||.+.+ ..++.++|||||||+
T Consensus 162 -------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~i 198 (267)
T cd06646 162 -------------------------------------------KRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGIT 198 (267)
T ss_pred -------------------------------------------ccCccccCccccCHhHcccccCCCCcchhhHHHHHHH
Confidence 0001357889999999853 337889999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCC-CCccc--cccC-chHHHHHHHcCCCCCCCCCChHHHHcCcc
Q 004989 301 LFELFC---PFSTGEEKTRTMSSLRHRV-LPPQL--LLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEF 363 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~-~p~~~--~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~hp~ 363 (720)
+|||++ ||........ ...+.... .++.+ ...+ +...+|+.+||..+|++|||++++|+|+|
T Consensus 199 l~el~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l~ 267 (267)
T cd06646 199 AIELAELQPPMFDLHPMRA-LFLMSKSNFQPPKLKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHLF 267 (267)
T ss_pred HHHHHhCCCCccccchhhh-heeeecCCCCCCCCccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCCC
Confidence 999999 4433222211 11111111 22222 1223 34459999999999999999999999987
No 257
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=99.96 E-value=1.7e-28 Score=255.76 Aligned_cols=200 Identities=19% Similarity=0.208 Sum_probs=153.4
Q ss_pred hhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
+|..+|..++||||+++++ ++..+. .++++||| .+++|.+++.. ....+++..++.++.||+.||.|||++|++
T Consensus 51 ~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~ 126 (263)
T cd05052 51 KEAAVMKEIKHPNLVQLLG-VCTREP---PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFI 126 (263)
T ss_pred HHHHHHHhCCCCChhheEE-EEcCCC---CcEEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEe
Confidence 5777899999999999999 444433 57999999 89999999944 334589999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+||+++.++.++|+|||.+.........
T Consensus 127 H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~---------------------------------------------- 160 (263)
T cd05052 127 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT---------------------------------------------- 160 (263)
T ss_pred ecccCcceEEEcCCCcEEeCCCccccccccceee----------------------------------------------
Confidence 9999999999999999999998887432111000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......++..|+|||.+.+..++.++|||||||++||
T Consensus 161 -------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e 197 (263)
T cd05052 161 -------------------------------------------AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 197 (263)
T ss_pred -------------------------------------------ccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHH
Confidence 0000123567999999988889999999999999999
Q ss_pred ccc----cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 304 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 304 Llt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|++ ||..... ......+..... +...... +...+|+.+||..+|++||++.++++
T Consensus 198 l~t~g~~p~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~ 257 (263)
T cd05052 198 IATYGMSPYPGIDL-SQVYELLEKGYR-MERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQ 257 (263)
T ss_pred HHcCCCCCCCCCCH-HHHHHHHHCCCC-CCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 997 5554332 233444443322 2223333 44559999999999999999999976
No 258
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.96 E-value=1.7e-28 Score=259.86 Aligned_cols=211 Identities=16% Similarity=0.205 Sum_probs=153.7
Q ss_pred hhhhhhcccCC-CCCceecccceeecCC-CCCcEEEEEecCCCCHHHHHhCC----CCCCCHHHHHHHHHHHHHHHHHHH
Q 004989 65 HSDGVELTHGD-HLRNQGGLSGVCENEA-AIDPFVHAIEWGDVSLRQWLDKP----KRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 65 ~~e~~~L~~l~-HpnIV~l~~~~~~~~~-~~~~~~lv~E~~ggsL~~~L~~~----~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
.+|..+++.+. ||||+++++.+..... ....+|++|||..++|.+++... ...+++..++.++.||+.||.|||
T Consensus 48 ~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH 127 (295)
T cd07837 48 LREISLLQMLSESIYIVRLLDVEHVEEKNGKPSLYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCH 127 (295)
T ss_pred HHHHHHHHHccCCCCccceeeeEeecCCCCCceEEEEeeccCcCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 35777888885 6999999994443332 23347999999666899988432 235899999999999999999999
Q ss_pred HCCceeccCCCCcEEEcc-CCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCC
Q 004989 139 SQGIVVHNVRPSCFVMSS-FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~~-~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~ 217 (720)
++||+||||||+||+++. ++.++|+|||.+....... .
T Consensus 128 ~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~~~~~~~~--------------------------------~--------- 166 (295)
T cd07837 128 KHGVMHRDLKPQNLLVDKQKGLLKIADLGLGRAFSIPV--------------------------------K--------- 166 (295)
T ss_pred HCCeeecCCChHHEEEecCCCeEEEeecccceecCCCc--------------------------------c---------
Confidence 999999999999999998 8899999998874321110 0
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC-CCCccccchh
Q 004989 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYR 296 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwS 296 (720)
......++++|+|||.+.+. .++.++||||
T Consensus 167 -------------------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s 197 (295)
T cd07837 167 -------------------------------------------------SYTHEIVTLWYRAPEVLLGSTHYSTPVDIWS 197 (295)
T ss_pred -------------------------------------------------ccCCcccccCCCChHHhhCCCCCCchHHHHH
Confidence 00012458899999998764 4799999999
Q ss_pred hhchhhhccc---cCCCCchHHHHHHHhhcCC------------------C---Ccc----c-cccCchHHHHHHHcCCC
Q 004989 297 LGVLLFELFC---PFSTGEEKTRTMSSLRHRV------------------L---PPQ----L-LLKFPKEASFCLWLLHP 347 (720)
Q Consensus 297 LGvll~eLlt---pf~~~~~~~~~~~~l~~~~------------------~---p~~----~-~~~~p~~~~Li~~~L~~ 347 (720)
|||++|+|++ ||................. . .+. . ....+...+||.+||.+
T Consensus 198 lG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 277 (295)
T cd07837 198 VGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRY 277 (295)
T ss_pred HHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccC
Confidence 9999999999 5655443322222111100 0 000 0 11223445999999999
Q ss_pred CCCCCCChHHHHcCcccC
Q 004989 348 EPSGRPKMGELLQSEFLN 365 (720)
Q Consensus 348 dP~~Rpta~eiL~hp~~~ 365 (720)
||.+||++.|+|.||||+
T Consensus 278 ~P~~R~~~~eil~~~~~~ 295 (295)
T cd07837 278 DPAKRISAKAALTHPYFD 295 (295)
T ss_pred ChhhcCCHHHHhcCCCcC
Confidence 999999999999999985
No 259
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.96 E-value=1.2e-28 Score=255.92 Aligned_cols=210 Identities=22% Similarity=0.233 Sum_probs=165.6
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH-C
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-Q 140 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs-~ 140 (720)
+...|...+.+++||||+++++ ++... ...+++||| .+++|.+++... ..+++..++.++.||+.||.|||+ .
T Consensus 45 ~~~~e~~~l~~l~~~~i~~~~~-~~~~~---~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~l~~~l~~lh~~~ 119 (264)
T cd06623 45 QLLRELKTLRSCESPYVVKCYG-AFYKE---GEISIVLEYMDGGSLADLLKKV-GKIPEPVLAYIARQILKGLDYLHTKR 119 (264)
T ss_pred HHHHHHHHHHhcCCCCeeeEEE-EEccC---CeEEEEEEecCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHhccC
Confidence 3447777899999999999999 44443 368999999 889999999554 459999999999999999999999 9
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
|++|+||+|+||+++.++.++|+|||.+........
T Consensus 120 ~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~-------------------------------------------- 155 (264)
T cd06623 120 HIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLD-------------------------------------------- 155 (264)
T ss_pred CCccCCCCHHHEEECCCCCEEEccCccceecccCCC--------------------------------------------
Confidence 999999999999999999999999987733211100
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhch
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
......++..|+|||.+.+..++.++||||||++
T Consensus 156 ----------------------------------------------~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~i 189 (264)
T cd06623 156 ----------------------------------------------QCNTFVGTVTYMSPERIQGESYSYAADIWSLGLT 189 (264)
T ss_pred ----------------------------------------------cccceeecccccCHhhhCCCCCCchhhHHHHHHH
Confidence 0001356889999999988889999999999999
Q ss_pred hhhccc---cCCCCc--hHHHHHHHhhcCCCCccccc-cCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 301 LFELFC---PFSTGE--EKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 301 l~eLlt---pf~~~~--~~~~~~~~l~~~~~p~~~~~-~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
+|+|++ ||.... ........+.....++.... ......+++.+||+++|+.||++.++++||||+..
T Consensus 190 l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~~~~~~~ 262 (264)
T cd06623 190 LLECALGKFPFLPPGQPSFFELMQAICDGPPPSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQHPFIKKA 262 (264)
T ss_pred HHHHHhCCCCCccccccCHHHHHHHHhcCCCCCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhCHHHHhc
Confidence 999999 555443 33444455544444333333 23445599999999999999999999999999764
No 260
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=99.96 E-value=1.6e-28 Score=258.40 Aligned_cols=205 Identities=16% Similarity=0.242 Sum_probs=153.4
Q ss_pred hhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCC--CCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPK--RSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~--~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.|..++++++||||+++++ .+.+.. .++++|||..++|.+++.... ..+++..++.++.||+.||.|||+.||+
T Consensus 47 ~E~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~ 122 (284)
T cd07836 47 REISLMKELKHENIVRLHD-VIHTEN---KLMLVFEYMDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVL 122 (284)
T ss_pred HHHHHHHhhcCCCEeeeee-eEeeCC---cEEEEEecCCccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 5777999999999999999 444443 579999996679999985433 4589999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+||+++.++.++++|||.+....... .
T Consensus 123 h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~--------------------------------~--------------- 155 (284)
T cd07836 123 HRDLKPQNLLINKRGELKLADFGLARAFGIPV--------------------------------N--------------- 155 (284)
T ss_pred eCCCCHHHEEECCCCcEEEeecchhhhhcCCc--------------------------------c---------------
Confidence 99999999999999999999998873321110 0
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC-CCccccchhhhchhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLF 302 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGvll~ 302 (720)
......+++.|+|||.+.+.. ++.++|||||||++|
T Consensus 156 -------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~ 192 (284)
T cd07836 156 -------------------------------------------TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMA 192 (284)
T ss_pred -------------------------------------------ccccccccccccChHHhcCCCCCCcHHHHHHHHHHHH
Confidence 000135688999999987654 789999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhc-------------------CCCCcc--------ccccCchHHHHHHHcCCCCCCCC
Q 004989 303 ELFC---PFSTGEEKTRTMSSLRH-------------------RVLPPQ--------LLLKFPKEASFCLWLLHPEPSGR 352 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~-------------------~~~p~~--------~~~~~p~~~~Li~~~L~~dP~~R 352 (720)
+|++ ||............+.. ...+.. .....+...+++.+||+.||.+|
T Consensus 193 ~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R 272 (284)
T cd07836 193 EMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELR 272 (284)
T ss_pred HHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccC
Confidence 9999 55443322111111100 000000 01122344599999999999999
Q ss_pred CChHHHHcCccc
Q 004989 353 PKMGELLQSEFL 364 (720)
Q Consensus 353 pta~eiL~hp~~ 364 (720)
|++.++++||||
T Consensus 273 ~~~~~~l~~~~f 284 (284)
T cd07836 273 ISAHDALQHPWF 284 (284)
T ss_pred CCHHHHhcCCCC
Confidence 999999999998
No 261
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.96 E-value=2e-28 Score=255.33 Aligned_cols=210 Identities=16% Similarity=0.148 Sum_probs=160.6
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++.+++||||+++++ .+.+.. ...++++||| .+++|.+++...+ .+++..++.++.||+.||.|||++|
T Consensus 50 ~~~~ei~~l~~l~h~~i~~~~~-~~~~~~-~~~~~~v~e~~~~~~L~~~~~~~~-~l~~~~~~~~~~~i~~al~~LH~~~ 126 (264)
T cd06653 50 ALECEIQLLKNLRHDRIVQYYG-CLRDPE-EKKLSIFVEYMPGGSIKDQLKAYG-ALTENVTRRYTRQILQGVSYLHSNM 126 (264)
T ss_pred HHHHHHHHHHHcCCCCcceEEE-EEEcCC-CCEEEEEEEeCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 4557888999999999999999 443332 2357899999 8999999995543 3899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+|+||||+||+++.++.++|+|||.+........ .+.
T Consensus 127 i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~-------------------------------~~~----------- 164 (264)
T cd06653 127 IVHRDIKGANILRDSAGNVKLGDFGASKRIQTICM-------------------------------SGT----------- 164 (264)
T ss_pred EecCCCCHHHEEEcCCCCEEECccccccccccccc-------------------------------cCc-----------
Confidence 99999999999999999999999988743211000 000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......|+..|+|||.+.+..++.++|||||||++
T Consensus 165 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 199 (264)
T cd06653 165 ---------------------------------------------GIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTV 199 (264)
T ss_pred ---------------------------------------------cccccCCcccccCHhhhcCCCCCccccHHHHHHHH
Confidence 00013578899999999888889999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
|+|++ ||............ .....++.++... +...+|+.+||. +|..||++.+++.|||.
T Consensus 200 ~~l~~g~~p~~~~~~~~~~~~~-~~~~~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~~~~ 264 (264)
T cd06653 200 VEMLTEKPPWAEYEAMAAIFKI-ATQPTKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRHPFV 264 (264)
T ss_pred HHHHhCCCCCCccCHHHHHHHH-HcCCCCCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhcCCCC
Confidence 99999 66554444333333 2222333334444 445599999999 57999999999999985
No 262
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=7.8e-30 Score=257.11 Aligned_cols=221 Identities=17% Similarity=0.272 Sum_probs=173.0
Q ss_pred hhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCcee
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|..+|...+||.+..+-. .|+... .+|+|||| .||.|.-.|.+ .+.+++..++.+-..|+.||.|||+++||.
T Consensus 217 TE~RVL~~~~HPFLt~LKY-sFQt~d---rlCFVMeyanGGeLf~HLsr-er~FsE~RtRFYGaEIvsAL~YLHs~~ivY 291 (516)
T KOG0690|consen 217 TENRVLQNCRHPFLTSLKY-SFQTQD---RLCFVMEYANGGELFFHLSR-ERVFSEDRTRFYGAEIVSALGYLHSRNIVY 291 (516)
T ss_pred hHHHHHHhccCcHHHHhhh-hhccCc---eEEEEEEEccCceEeeehhh-hhcccchhhhhhhHHHHHHhhhhhhCCeee
Confidence 5666899999999988876 454543 68999999 99999988843 456999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccc
Q 004989 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
||||.+|+|++.+|++||.|||+|+.-... ++
T Consensus 292 RDlKLENLlLDkDGHIKitDFGLCKE~I~~---------------------------------g~--------------- 323 (516)
T KOG0690|consen 292 RDLKLENLLLDKDGHIKITDFGLCKEEIKY---------------------------------GD--------------- 323 (516)
T ss_pred eechhhhheeccCCceEeeecccchhcccc---------------------------------cc---------------
Confidence 999999999999999999999999532111 00
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhc
Q 004989 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 304 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eL 304 (720)
+....+|||.|+|||++....|+.++|+|.+||++|||
T Consensus 324 ------------------------------------------t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEM 361 (516)
T KOG0690|consen 324 ------------------------------------------TTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEM 361 (516)
T ss_pred ------------------------------------------eeccccCChhhcCchhhccccccceeehhhhhHHHHHH
Confidence 01126899999999999999999999999999999999
Q ss_pred cc---cCCCCchHHHHHHHhh-c-CCCCccccccCchHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC-ccchHH
Q 004989 305 FC---PFSTGEEKTRTMSSLR-H-RVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP-RDSMEE 373 (720)
Q Consensus 305 lt---pf~~~~~~~~~~~~l~-~-~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~-~~~l~e 373 (720)
+| ||...+.. ..+..|. . -.+|..+ .|+...|+..+|.+||.+|. .+.||.+|+||... +...-.
T Consensus 362 mCGRLPFyn~dh~-kLFeLIl~ed~kFPr~l---s~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~FF~~v~W~~~~~ 437 (516)
T KOG0690|consen 362 MCGRLPFYNKDHE-KLFELILMEDLKFPRTL---SPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRFFASVDWEATYR 437 (516)
T ss_pred HhccCcccccchh-HHHHHHHhhhccCCccC---CHHHHHHHHHHhhcChHhhcCCCchhHHHHHhhhhhccCCHHHHHH
Confidence 99 88775443 2222222 2 2233332 35556999999999999995 58999999999987 444555
Q ss_pred HHHHHHHhhhhh
Q 004989 374 REAAIELREQID 385 (720)
Q Consensus 374 ~~~~~~~~e~~~ 385 (720)
++..+++.+...
T Consensus 438 Kki~PPfKPqVt 449 (516)
T KOG0690|consen 438 KKIEPPFKPQVT 449 (516)
T ss_pred hccCCCCCCCcc
Confidence 555555555443
No 263
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=99.96 E-value=5.4e-30 Score=255.78 Aligned_cols=210 Identities=12% Similarity=0.161 Sum_probs=166.9
Q ss_pred hhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCcee
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|+.|+.+++.|+||++|+.+|... .+|+|||| +.|++.+.++....++++.++..+++..+.||.|||...-||
T Consensus 77 KEISIMQQC~S~yVVKYYGSYFK~s----DLWIVMEYCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIH 152 (502)
T KOG0574|consen 77 KEISIMQQCKSKYVVKYYGSYFKHS----DLWIVMEYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIH 152 (502)
T ss_pred HHHHHHHHcCCchhhhhhhhhccCC----ceEeehhhcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 7888999999999999999666544 37999999 789999999877888999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccc
Q 004989 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
||||..|||++-+|+.||+|||.+-.. +|- +
T Consensus 153 RDIKAGNILLNT~G~AKLADFGVAGQL------------------------------------TDT-M------------ 183 (502)
T KOG0574|consen 153 RDIKAGNILLNTDGIAKLADFGVAGQL------------------------------------TDT-M------------ 183 (502)
T ss_pred hhcccccEEEcccchhhhhhccccchh------------------------------------hhh-H------------
Confidence 999999999999999999999988221 110 0
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhc
Q 004989 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 304 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eL 304 (720)
.+....+|||.|||||++..-.|.+.+||||||++..||
T Consensus 184 -----------------------------------------AKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEM 222 (502)
T KOG0574|consen 184 -----------------------------------------AKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEM 222 (502)
T ss_pred -----------------------------------------HhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhh
Confidence 011236899999999999999999999999999999999
Q ss_pred cccCCCCchHHHHHHHhhc-CCCCccc--cccCchHH-HHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004989 305 FCPFSTGEEKTRTMSSLRH-RVLPPQL--LLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 305 ltpf~~~~~~~~~~~~l~~-~~~p~~~--~~~~p~~~-~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
..+-++......+.....- -..||.+ +..|+... +|++.||.+.|++|.||.++++|||++....
T Consensus 223 AEG~PPYsDIHPMRAIFMIPT~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H~FiknA~g 291 (502)
T KOG0574|consen 223 AEGRPPYSDIHPMRAIFMIPTKPPPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEHTFIKNAPG 291 (502)
T ss_pred hcCCCCcccccccceeEeccCCCCCCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhhhhhcCCCc
Confidence 9833332222111111111 1223333 23555544 9999999999999999999999999998633
No 264
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.96 E-value=1.5e-28 Score=259.20 Aligned_cols=208 Identities=18% Similarity=0.191 Sum_probs=159.1
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH-C
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-Q 140 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs-~ 140 (720)
+..+|..++..++||||+++++ .+... ..+|+|||| .+++|.+++.+. ..+++..++.++.||+.||.|||+ .
T Consensus 49 ~~~~E~~~l~~l~h~~i~~~~~-~~~~~---~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~ 123 (284)
T cd06620 49 QILRELQIMHECRSPYIVSFYG-AFLNE---NNICMCMEFMDCGSLDRIYKKG-GPIPVEILGKIAVAVVEGLTYLYNVH 123 (284)
T ss_pred HHHHHHHHHHHcCCCCcceEee-eEecC---CEEEEEEecCCCCCHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHHhc
Confidence 3347778899999999999999 44444 368999999 899999988554 348999999999999999999997 6
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
|++||||||+||+++.++.++|+|||++......
T Consensus 124 ~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~---------------------------------------------- 157 (284)
T cd06620 124 RIMHRDIKPSNILVNSRGQIKLCDFGVSGELINS---------------------------------------------- 157 (284)
T ss_pred CeeccCCCHHHEEECCCCcEEEccCCcccchhhh----------------------------------------------
Confidence 9999999999999999999999988876221000
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhch
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
......|+..|+|||++.+..++.++|||||||+
T Consensus 158 ----------------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~ 191 (284)
T cd06620 158 ----------------------------------------------IADTFVGTSTYMSPERIQGGKYTVKSDVWSLGIS 191 (284)
T ss_pred ----------------------------------------------ccCccccCcccCCHHHHccCCCCccchHHHHHHH
Confidence 0001367899999999988889999999999999
Q ss_pred hhhccc---cCCCCchH----------HHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCC
Q 004989 301 LFELFC---PFSTGEEK----------TRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNE 366 (720)
Q Consensus 301 l~eLlt---pf~~~~~~----------~~~~~~l~~~~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~ 366 (720)
+|+|++ ||...... ......+.....+.......+ ...+|+.+||.+||.+|||+.|+++|+||..
T Consensus 192 l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~ 271 (284)
T cd06620 192 IIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQ 271 (284)
T ss_pred HHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccCCCCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCccccc
Confidence 999998 66543221 111222222211211112233 4559999999999999999999999999876
Q ss_pred C
Q 004989 367 P 367 (720)
Q Consensus 367 ~ 367 (720)
.
T Consensus 272 ~ 272 (284)
T cd06620 272 A 272 (284)
T ss_pred c
Confidence 5
No 265
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=99.96 E-value=1.9e-28 Score=254.63 Aligned_cols=206 Identities=16% Similarity=0.158 Sum_probs=152.5
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..|..+++.++||||+++++ ++.... ...+++||| .+++|.+++.+....+++..+..++.||+.||.|||+.||+
T Consensus 44 ~~e~~~l~~l~h~~iv~~~~-~~~~~~--~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~ 120 (262)
T cd05058 44 LKEGIIMKDFSHPNVLSLLG-ICLPSE--GSPLVVLPYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFV 120 (262)
T ss_pred HHHHHHHccCCCCCcceEEE-EeecCC--CCcEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 36777899999999999999 443222 246899999 89999999966555578888999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.+||+|||++....... .+...
T Consensus 121 H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~---------------------------------~~~~~---------- 157 (262)
T cd05058 121 HRDLAARNCMLDESFTVKVADFGLARDIYDKE---------------------------------YYSVH---------- 157 (262)
T ss_pred ccccCcceEEEcCCCcEEECCccccccccCCc---------------------------------ceeec----------
Confidence 99999999999999999999998874321110 00000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......+++.|+|||.+.+..++.++|||||||++||
T Consensus 158 -------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~e 194 (262)
T cd05058 158 -------------------------------------------NHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWE 194 (262)
T ss_pred -------------------------------------------ccccCcCCccccChhHhccCccchHHHHHHHHHHHHH
Confidence 0001245678999999988889999999999999999
Q ss_pred ccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 304 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 304 Llt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|++ ||...... .....+..+..++......+...+++.+||+++|++||++.+++.
T Consensus 195 l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~ 254 (262)
T cd05058 195 LMTRGAPPYPDVDSF-DITVYLLQGRRLLQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVS 254 (262)
T ss_pred HHcCCCCCCCCCCHH-HHHHHHhcCCCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 998 33333222 333333333222221112234569999999999999999999986
No 266
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.96 E-value=7.4e-29 Score=268.65 Aligned_cols=218 Identities=18% Similarity=0.223 Sum_probs=159.8
Q ss_pred hchhhhhhcccCCCCCceecccceeecC-CCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENE-AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~-~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|..++||||+++++.+.... .....+|++|||.+++|.+++... ..+++..++.++.||+.||.|||++|
T Consensus 50 ~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ 128 (337)
T cd07858 50 RTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDVYIVYELMDTDLHQIIRSS-QTLSDDHCQYFLYQLLRGLKYIHSAN 128 (337)
T ss_pred HHHHHHHHHHhcCCCCccchHHheecccccccCcEEEEEeCCCCCHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 4457888999999999999999333221 122358999999778999999654 45999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
++||||||+||+++.++.++|+|||++...... ..+
T Consensus 129 i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~---------------------------------~~~----------- 164 (337)
T cd07858 129 VLHRDLKPSNLLLNANCDLKICDFGLARTTSEK---------------------------------GDF----------- 164 (337)
T ss_pred EecCCCCHHHEEEcCCCCEEECcCccccccCCC---------------------------------ccc-----------
Confidence 999999999999999999999998887332110 000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC-CCCCccccchhhhch
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVL 300 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sDIwSLGvl 300 (720)
.....++..|+|||.+.+ ..++.++|||||||+
T Consensus 165 ----------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~i 198 (337)
T cd07858 165 ----------------------------------------------MTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCI 198 (337)
T ss_pred ----------------------------------------------ccccccccCccChHHHhcCCCCCCcccHHHHHHH
Confidence 001356889999998865 358999999999999
Q ss_pred hhhccc---cCCCCchHH--HHHHHhhcC------------------------CCC---ccccccCchHHHHHHHcCCCC
Q 004989 301 LFELFC---PFSTGEEKT--RTMSSLRHR------------------------VLP---PQLLLKFPKEASFCLWLLHPE 348 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~--~~~~~l~~~------------------------~~p---~~~~~~~p~~~~Li~~~L~~d 348 (720)
+|+|++ ||...+... ......... ..+ .......+...+|+.+||+++
T Consensus 199 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~ 278 (337)
T cd07858 199 FAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFD 278 (337)
T ss_pred HHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCC
Confidence 999998 454322110 000000000 000 001122344559999999999
Q ss_pred CCCCCChHHHHcCcccCCCccch
Q 004989 349 PSGRPKMGELLQSEFLNEPRDSM 371 (720)
Q Consensus 349 P~~Rpta~eiL~hp~~~~~~~~l 371 (720)
|++|||+.++|+||||.......
T Consensus 279 P~~Rps~~ell~h~~~~~~~~~~ 301 (337)
T cd07858 279 PSKRITVEEALAHPYLASLHDPS 301 (337)
T ss_pred hhhccCHHHHHcCcchhhhcCcc
Confidence 99999999999999998865543
No 267
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=99.96 E-value=1.9e-28 Score=254.73 Aligned_cols=209 Identities=15% Similarity=0.223 Sum_probs=158.7
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC--CCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP--KRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~--~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
..+|..+|+.++||||+++++ .+..+. .++++||+ .|++|.+++... ...+++..++.++.||+.||.|||++
T Consensus 46 ~~~e~~~l~~l~~~~i~~~~~-~~~~~~---~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~ 121 (267)
T cd06610 46 LRKEVQAMSQCNHPNVVKYYT-SFVVGD---ELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSN 121 (267)
T ss_pred HHHHHHHHHhcCCCCEEEEEE-EEeeCC---EEEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 346777899999999999999 444433 57999999 899999999542 24589999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+||++++++.++|+|||.+.........
T Consensus 122 ~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~------------------------------------------- 158 (267)
T cd06610 122 GQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDR------------------------------------------- 158 (267)
T ss_pred CeecCCCCHHhEEEcCCCCEEEcccchHHHhccCccc-------------------------------------------
Confidence 9999999999999999999999999887432111000
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC-CCCccccchhhhc
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGV 299 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGv 299 (720)
. . .......|+..|+|||.+... .++.++|+|||||
T Consensus 159 ------------------------~----------------~---~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~ 195 (267)
T cd06610 159 ------------------------T----------------R---KVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGI 195 (267)
T ss_pred ------------------------c----------------c---cccccccCChhhcChHHHccccCcCcccchHhHhH
Confidence 0 0 000113678999999998777 6899999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcCCCCcccc------ccCchHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004989 300 LLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLL------LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~------~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
++|+|++ ||............+.. . ++.+. ...+...+|+.+||..||.+||++.++++||||
T Consensus 196 i~~~l~~g~~p~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~p~~ 267 (267)
T cd06610 196 TAIELATGAAPYSKYPPMKVLMLTLQN-D-PPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKHKFF 267 (267)
T ss_pred HHHHHHhCCCCccccChhhhHHHHhcC-C-CCCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhhCCCC
Confidence 9999999 55544333222222222 1 11111 122345699999999999999999999999997
No 268
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.96 E-value=1.6e-28 Score=266.65 Aligned_cols=210 Identities=16% Similarity=0.246 Sum_probs=157.8
Q ss_pred chhhhhhcccCCCCCceecccceeecCC---CCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEA---AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~---~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
..+|..++.+++||||+++++ ++.... ....+|++|||...+|.+++. ..+++..++.++.||+.||.|||++
T Consensus 61 ~~~e~~~l~~l~h~niv~~~~-~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~---~~~~~~~~~~~~~qi~~aL~~LH~~ 136 (342)
T cd07879 61 AYRELTLLKHMQHENVIGLLD-VFTSAVSGDEFQDFYLVMPYMQTDLQKIMG---HPLSEDKVQYLVYQMLCGLKYIHSA 136 (342)
T ss_pred HHHHHHHHHhcCCCCccchhh-eecccccCCCCceEEEEecccccCHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 347788999999999999999 443322 223579999996678888762 2489999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+||+++.++.++|+|||++......
T Consensus 137 ~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~~---------------------------------------------- 170 (342)
T cd07879 137 GIIHRDLKPGNLAVNEDCELKILDFGLARHADAE---------------------------------------------- 170 (342)
T ss_pred CcccCCCCHHHEEECCCCCEEEeeCCCCcCCCCC----------------------------------------------
Confidence 9999999999999999999999999887321000
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC-CCCccccchhhhc
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGV 299 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGv 299 (720)
.....+++.|+|||.+.+. .++.++|||||||
T Consensus 171 -----------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGv 203 (342)
T cd07879 171 -----------------------------------------------MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGC 203 (342)
T ss_pred -----------------------------------------------CCCceeeecccChhhhcCccccCchHHHHHHHH
Confidence 0013568899999998764 4899999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcC------------------------CCC-cc----ccccCchHHHHHHHcCCC
Q 004989 300 LLFELFC---PFSTGEEKTRTMSSLRHR------------------------VLP-PQ----LLLKFPKEASFCLWLLHP 347 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~~------------------------~~p-~~----~~~~~p~~~~Li~~~L~~ 347 (720)
++|||++ ||............+... ..+ .. +....+...+|+.+||+.
T Consensus 204 il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~ 283 (342)
T cd07879 204 IMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLEL 283 (342)
T ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCC
Confidence 9999999 665543222111111100 000 00 112234456999999999
Q ss_pred CCCCCCChHHHHcCcccCCCccc
Q 004989 348 EPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 348 dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
||.+||++.+++.||||......
T Consensus 284 dP~~R~~~~e~l~h~~f~~~~~~ 306 (342)
T cd07879 284 DVDKRLTATEALEHPYFDSFRDA 306 (342)
T ss_pred ChhhCcCHHHHhcCcchhhcccc
Confidence 99999999999999999988553
No 269
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.96 E-value=7.5e-29 Score=269.22 Aligned_cols=216 Identities=14% Similarity=0.126 Sum_probs=155.4
Q ss_pred hhhhhcccCCCCCceecccceeecCCC----------CCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHH
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAA----------IDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVY 135 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~----------~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~ 135 (720)
+|..+|..++||||+++++.+...... ...+|++|||.+++|.+++... .+++..++.++.||+.||.
T Consensus 51 ~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~--~l~~~~~~~~~~qi~~aL~ 128 (342)
T cd07854 51 REIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGSLTELNSVYIVQEYMETDLANVLEQG--PLSEEHARLFMYQLLRGLK 128 (342)
T ss_pred HHHHHHHhcCCCcchhhHhhhcccccccccccccccccceEEEEeecccccHHHHHHcC--CCCHHHHHHHHHHHHHHHH
Confidence 677789999999999999844433221 1247999999667999988543 4899999999999999999
Q ss_pred HHHHCCceeccCCCCcEEEc-cCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhccccccccccc
Q 004989 136 AAHSQGIVVHNVRPSCFVMS-SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVT 214 (720)
Q Consensus 136 yLHs~gIvHrDLKP~NILl~-~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~ 214 (720)
|||+.||+||||||+||+++ .++.++++|||.+......... ..
T Consensus 129 ~LH~~givH~dikp~Nili~~~~~~~kl~dfg~~~~~~~~~~~------------------------------~~----- 173 (342)
T cd07854 129 YIHSANVLHRDLKPANVFINTEDLVLKIGDFGLARIVDPHYSH------------------------------KG----- 173 (342)
T ss_pred HHHhCCcccCCCCHHHEEEcCCCceEEECCcccceecCCcccc------------------------------cc-----
Confidence 99999999999999999998 4557899988877332110000 00
Q ss_pred CCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC-CCCCcccc
Q 004989 215 APTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASD 293 (720)
Q Consensus 215 ~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sD 293 (720)
......|+..|+|||.+.+ ..++.++|
T Consensus 174 ----------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~D 201 (342)
T cd07854 174 ----------------------------------------------------YLSEGLVTKWYRSPRLLLSPNNYTKAID 201 (342)
T ss_pred ----------------------------------------------------ccccccccccccCHHHHhCccccCchhh
Confidence 0001256889999998755 44889999
Q ss_pred chhhhchhhhccc---cCCCCchHHHHHHHhhcC----------------------CCCc-----cc-cccCchHHHHHH
Q 004989 294 IYRLGVLLFELFC---PFSTGEEKTRTMSSLRHR----------------------VLPP-----QL-LLKFPKEASFCL 342 (720)
Q Consensus 294 IwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~----------------------~~p~-----~~-~~~~p~~~~Li~ 342 (720)
||||||++|+|++ ||............+... ..++ .+ ........+|+.
T Consensus 202 iwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 281 (342)
T cd07854 202 MWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLE 281 (342)
T ss_pred HHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHH
Confidence 9999999999999 676544332222221110 0000 01 112234459999
Q ss_pred HcCCCCCCCCCChHHHHcCcccCCCccc
Q 004989 343 WLLHPEPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 343 ~~L~~dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
+||.+||.+|||+.++|.||||+....+
T Consensus 282 ~~L~~dP~~R~t~~ell~h~~~~~~~~~ 309 (342)
T cd07854 282 QILTFNPMDRLTAEEALMHPYMSCYSCP 309 (342)
T ss_pred HHhCCCchhccCHHHHhCCCccccccCC
Confidence 9999999999999999999999865433
No 270
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=99.96 E-value=2.3e-28 Score=255.41 Aligned_cols=207 Identities=14% Similarity=0.080 Sum_probs=155.1
Q ss_pred hhhhhhcccCCCCCceecccceeecC--CCCCcEEEEEec-CCCCHHHHHhC-----CCCCCCHHHHHHHHHHHHHHHHH
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENE--AAIDPFVHAIEW-GDVSLRQWLDK-----PKRSVDVYECLHIFRQIVEIVYA 136 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~--~~~~~~~lv~E~-~ggsL~~~L~~-----~~~~l~~~~~~~i~~QIl~aL~y 136 (720)
.+|..++..++||||+++++.++... ......+++||| .+++|.+++.. ....+++..++.++.||+.||.|
T Consensus 48 ~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 127 (272)
T cd05075 48 LSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEY 127 (272)
T ss_pred HHHHHHHHhCCCCCcceEEEEEccCCcccCCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHH
Confidence 36777899999999999998443322 122357899999 88999998831 22348999999999999999999
Q ss_pred HHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCC
Q 004989 137 AHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 216 (720)
Q Consensus 137 LHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~ 216 (720)
||++||+||||||+|||++.++.++|+|||++......... .
T Consensus 128 lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~------------------------------------~-- 169 (272)
T cd05075 128 LSSKSFIHRDLAARNCMLNENMNVCVADFGLSKKIYNGDYY------------------------------------R-- 169 (272)
T ss_pred HHHCCeeccccchhheEEcCCCCEEECCCCcccccCcccce------------------------------------e--
Confidence 99999999999999999999999999999887432111000 0
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchh
Q 004989 217 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYR 296 (720)
Q Consensus 217 ~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwS 296 (720)
......+++.|+|||.+.+..++.++||||
T Consensus 170 --------------------------------------------------~~~~~~~~~~~~~pe~~~~~~~~~~~Di~s 199 (272)
T cd05075 170 --------------------------------------------------QGRIAKMPVKWIAIESLADRVYTTKSDVWS 199 (272)
T ss_pred --------------------------------------------------cCCcccCCcccCCHHHccCCCcChHHHHHH
Confidence 000023467899999999888999999999
Q ss_pred hhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 297 LGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 297 LGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++|||++ ||..... ......+..+..++..........+++.+||+++|.+|||+.++++
T Consensus 200 lG~il~el~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~ 266 (272)
T cd05075 200 FGVTMWEIATRGQTPYPGVEN-SEIYDYLRQGNRLKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRC 266 (272)
T ss_pred HHHHHHHHHcCCCCCCCCCCH-HHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 9999999987 5554333 3444445544333322223344569999999999999999999986
No 271
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.96 E-value=2.3e-28 Score=251.82 Aligned_cols=211 Identities=21% Similarity=0.231 Sum_probs=163.4
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++++++||||+++++ .+.... ...+++++|| .+++|.+++.+.. .+++..++.++.|++.||.|||+.|
T Consensus 45 ~~~~e~~~l~~l~~~~i~~~~~-~~~~~~-~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~~~ 121 (260)
T cd06606 45 ALEREIRILSSLQHPNIVRYYG-SERDEE-KNTLNIFLEYVSGGSLSSLLKKFG-KLPEPVIRKYTRQILEGLAYLHSNG 121 (260)
T ss_pred HHHHHHHHHHHcCCCCEeeEEE-EEecCC-CCeEEEEEEecCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3446777999999999999999 443331 2367999999 7999999996544 6999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
++|+||+|+||+++.++.++|+|||.+........ .
T Consensus 122 ~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~---------------------------------~----------- 157 (260)
T cd06606 122 IVHRDIKGANILVDSDGVVKLADFGCAKRLGDIET---------------------------------G----------- 157 (260)
T ss_pred ccccCCCHHHEEEcCCCCEEEcccccEEecccccc---------------------------------c-----------
Confidence 99999999999999999999999988743221100 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
.......++..|+|||.+.+..++.++||||||+++
T Consensus 158 --------------------------------------------~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il 193 (260)
T cd06606 158 --------------------------------------------EGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTV 193 (260)
T ss_pred --------------------------------------------ccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHH
Confidence 000013568899999999888899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
|+|++ ||............+......+.++... +...+|+.+||..+|.+||++.++++||||
T Consensus 194 ~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 260 (260)
T cd06606 194 IEMATGKPPWSELGNPMAALYKIGSSGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQHPFL 260 (260)
T ss_pred HHHHhCCCCCCCCCchHHHHHhccccCCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhCCCC
Confidence 99999 6655543333444444322333333333 344599999999999999999999999997
No 272
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.96 E-value=2.5e-29 Score=271.37 Aligned_cols=263 Identities=14% Similarity=0.164 Sum_probs=172.6
Q ss_pred hhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCcee
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|..||+..+.++||+||. .|++.+ .+|+||+| .||++..+|.+.+- |+|..++.|+..+.+|+++.|..|+||
T Consensus 678 AERDILAEADn~WVVrLyy-SFQDkd---nLYFVMdYIPGGDmMSLLIrmgI-FeE~LARFYIAEltcAiesVHkmGFIH 752 (1034)
T KOG0608|consen 678 AERDILAEADNEWVVRLYY-SFQDKD---NLYFVMDYIPGGDMMSLLIRMGI-FEEDLARFYIAELTCAIESVHKMGFIH 752 (1034)
T ss_pred hhhhhHhhcCCcceEEEEE-EeccCC---ceEEEEeccCCccHHHHHHHhcc-CHHHHHHHHHHHHHHHHHHHHhcccee
Confidence 4556999999999999999 777776 46999999 99999999966554 999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccc
Q 004989 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+||||+.+|++||.|||+|..+.-..- ...++ .+|-. +..+
T Consensus 753 RDiKPDNILIDrdGHIKLTDFGLCTGfRWTHd---------------------skYYq----~gdH~--------RqDS- 798 (1034)
T KOG0608|consen 753 RDIKPDNILIDRDGHIKLTDFGLCTGFRWTHD---------------------SKYYQ----EGDHH--------RQDS- 798 (1034)
T ss_pred cccCccceEEccCCceeeeeccccccceeccc---------------------ccccc----CCCcc--------cccc-
Confidence 99999999999999999999999965421100 00000 00000 0000
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcc--cCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEK--KQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~--~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
+ .-...+.+.+-+...-+.+ .+..-......+||+.|+|||++....|+..+|+||.|||||
T Consensus 799 -m---------------ep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~ 862 (1034)
T KOG0608|consen 799 -M---------------EPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILY 862 (1034)
T ss_pred -C---------------CCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHH
Confidence 0 0000111111110000000 112222233479999999999999999999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhc-CCCCccccccCchHH-HHHHHcCCCCCCCCC---ChHHHHcCcccCCCccchHHH
Q 004989 303 ELFC---PFSTGEEKTRTMSSLRH-RVLPPQLLLKFPKEA-SFCLWLLHPEPSGRP---KMGELLQSEFLNEPRDSMEER 374 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~-~~~p~~~~~~~p~~~-~Li~~~L~~dP~~Rp---ta~eiL~hp~~~~~~~~l~e~ 374 (720)
||+. ||.........+..+.= ..+.-....+.++++ +||.++. .++++|. .++++..||||+...-.. .+
T Consensus 863 em~~g~~pf~~~tp~~tq~kv~nw~~~l~~~~~~~ls~e~~~li~kLc-~sad~RLGkng~d~vKaHpfFkgIDfss-lR 940 (1034)
T KOG0608|consen 863 EMLVGQPPFLADTPGETQYKVINWRNFLHIPYQGNLSKEALDLIQKLC-CSADSRLGKNGADQVKAHPFFKGIDFSS-LR 940 (1034)
T ss_pred HHhhCCCCccCCCCCcceeeeeehhhccccccccccCHHHHHHHHHHh-cChhhhhcccchhhhhcCccccccchHh-hh
Confidence 9999 67654433222221110 111111223344444 7877754 5778886 577899999999984433 33
Q ss_pred HHHHHHhhhhh
Q 004989 375 EAAIELREQID 385 (720)
Q Consensus 375 ~~~~~~~e~~~ 385 (720)
+...+....+.
T Consensus 941 kq~ApYIP~It 951 (1034)
T KOG0608|consen 941 KQRAPYIPRIT 951 (1034)
T ss_pred hccCCcCcccc
Confidence 33333444333
No 273
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.96 E-value=2.2e-28 Score=257.45 Aligned_cols=203 Identities=19% Similarity=0.230 Sum_probs=155.0
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC---------------CCCCCHHHHHHHH
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---------------KRSVDVYECLHIF 127 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~---------------~~~l~~~~~~~i~ 127 (720)
...|..++..++||||+++++ ++.... ..++++|| .+++|.+++... ...+++..++.++
T Consensus 55 ~~~e~~~~~~l~h~~iv~~~~-~~~~~~---~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (283)
T cd05091 55 FKHEAMMRSRLQHPNIVCLLG-VVTKEQ---PLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIV 130 (283)
T ss_pred HHHHHHHHhcCCCCCcCeEEE-EEcCCC---ceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHH
Confidence 346778899999999999999 554443 47899999 889999998321 1247888999999
Q ss_pred HHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccc
Q 004989 128 RQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRR 207 (720)
Q Consensus 128 ~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l 207 (720)
.||+.||.|||++||+||||||+||+++.++.+||+|||+++.....
T Consensus 131 ~ql~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--------------------------------- 177 (283)
T cd05091 131 TQIAAGMEFLSSHHVVHKDLATRNVLVFDKLNVKISDLGLFREVYAA--------------------------------- 177 (283)
T ss_pred HHHHHHHHHHHHcCccccccchhheEecCCCceEecccccccccccc---------------------------------
Confidence 99999999999999999999999999999999999999887432110
Q ss_pred cccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC
Q 004989 208 EDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP 287 (720)
Q Consensus 208 ~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 287 (720)
++ .. ......+++.|+|||.+.+..
T Consensus 178 -~~------------------------------------~~------------------~~~~~~~~~~y~aPE~~~~~~ 202 (283)
T cd05091 178 -DY------------------------------------YK------------------LMGNSLLPIRWMSPEAIMYGK 202 (283)
T ss_pred -hh------------------------------------ee------------------eccCccCCccccCHHHHhcCC
Confidence 00 00 000124578899999998888
Q ss_pred CCccccchhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCch-HHHHHHHcCCCCCCCCCChHHHHc
Q 004989 288 VSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 288 ~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~-~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
++.++|||||||++|||++ ||...... .....+.....++. ....|. ..+|+..||+.+|.+||++.+|++
T Consensus 203 ~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~-~~~~~i~~~~~~~~-~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~ 278 (283)
T cd05091 203 FSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ-DVIEMIRNRQVLPC-PDDCPAWVYTLMLECWNEFPSRRPRFKDIHS 278 (283)
T ss_pred CCcchhHHHHHHHHHHHHcCCCCCCCCCCHH-HHHHHHHcCCcCCC-CCCCCHHHHHHHHHHhCCCcccCCCHHHHHH
Confidence 9999999999999999997 55444333 44444444443332 233444 459999999999999999999986
No 274
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=99.96 E-value=2.3e-28 Score=256.96 Aligned_cols=204 Identities=14% Similarity=0.094 Sum_probs=155.0
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+...|..++..++||||+++++ ++... ..+++||| .+++|.+++......+++..++.++.||+.||.|||++|
T Consensus 55 ~~~~e~~~l~~~~~~~i~~~~~-~~~~~----~~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ 129 (279)
T cd05109 55 EILDEAYVMAGVGSPYVCRLLG-ICLTS----TVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVR 129 (279)
T ss_pred HHHHHHHHHHhcCCCCCceEEE-EEcCC----CcEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3447778899999999999999 44332 35789999 899999999665556999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||+++........ .
T Consensus 130 iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~~~--------------------------------~----------- 166 (279)
T cd05109 130 LVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETE--------------------------------Y----------- 166 (279)
T ss_pred eeccccccceEEEcCCCcEEECCCCceeecccccce--------------------------------e-----------
Confidence 999999999999999999999999887432111000 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......+++.|+|||.+.+..++.++|||||||++
T Consensus 167 ---------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l 201 (279)
T cd05109 167 ---------------------------------------------HADGGKVPIKWMALESILHRRFTHQSDVWSYGVTV 201 (279)
T ss_pred ---------------------------------------------ecCCCccchhhCCHHHhccCCCCchhHHHHHHHHH
Confidence 00001346789999999888899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||..... ......+.....++......+...+++.+||..||+.||++.+++.
T Consensus 202 ~el~t~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~ 263 (279)
T cd05109 202 WELMTFGAKPYDGIPA-REIPDLLEKGERLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVD 263 (279)
T ss_pred HHHHcCCCCCCCCCCH-HHHHHHHHCCCcCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 99987 4443322 2233334443333333333445569999999999999999999985
No 275
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=99.96 E-value=2.6e-28 Score=260.31 Aligned_cols=204 Identities=15% Similarity=0.176 Sum_probs=154.9
Q ss_pred hhhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 65 HSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 65 ~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
..|..+++++ +||||+++++ .+.... ..|++||| .+++|.+++.. ....+++.+++.++.||+.||.|||++|
T Consensus 86 ~~E~~~l~~l~~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ 161 (302)
T cd05055 86 MSELKIMSHLGNHENIVNLLG-ACTIGG---PILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKN 161 (302)
T ss_pred HHHHHHHHhccCCCCcceEEE-EEecCC---ceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 4677789999 8999999999 554443 57999999 88999999954 3334899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+|+||||+|||++.++.++++|||.+....... .+
T Consensus 162 ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~---------------------------------~~----------- 197 (302)
T cd05055 162 CIHRDLAARNVLLTHGKIVKICDFGLARDIMNDS---------------------------------NY----------- 197 (302)
T ss_pred eehhhhccceEEEcCCCeEEECCCcccccccCCC---------------------------------ce-----------
Confidence 9999999999999999999999998874321110 00
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
. ......++..|+|||.+.+..++.++|||||||++
T Consensus 198 ---~-----------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil 233 (302)
T cd05055 198 ---V-----------------------------------------VKGNARLPVKWMAPESIFNCVYTFESDVWSYGILL 233 (302)
T ss_pred ---e-----------------------------------------ecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHH
Confidence 0 00002357789999999888899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||............+.....++......+...+|+.+||.++|++|||+.|+++
T Consensus 234 ~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~ 296 (302)
T cd05055 234 WEIFSLGSNPYPGMPVDSKFYKLIKEGYRMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQ 296 (302)
T ss_pred HHHHhCCCCCcCCCCchHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 99986 555444333333333333222222222345569999999999999999999985
No 276
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=99.96 E-value=2.4e-28 Score=256.70 Aligned_cols=195 Identities=17% Similarity=0.219 Sum_probs=145.1
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..|..+++.++||||+++++ ++.... ..++|||| .+++|..++.+....+++..+..++.||+.||.|||++||+
T Consensus 64 ~~~~~~~~~l~h~niv~~~~-~~~~~~---~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ii 139 (274)
T cd05076 64 FETASLMSQVSHIHLAFVHG-VCVRGS---ENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLV 139 (274)
T ss_pred HHHHHHHhcCCCCCeeeEEE-EEEeCC---ceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCcc
Confidence 35667899999999999999 554443 56899999 99999999966555689999999999999999999999999
Q ss_pred eccCCCCcEEEccCCc-------eEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCC
Q 004989 144 VHNVRPSCFVMSSFNH-------VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 216 (720)
Q Consensus 144 HrDLKP~NILl~~~~~-------vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~ 216 (720)
||||||+|||++..+. ++++|||.+ ...
T Consensus 140 H~dlkp~Nill~~~~~~~~~~~~~kl~d~g~~---------------------------------------------~~~ 174 (274)
T cd05076 140 HGNVCAKNILLARLGLAEGTSPFIKLSDPGVS---------------------------------------------FTA 174 (274)
T ss_pred CCCCCcccEEEeccCcccCccceeeecCCccc---------------------------------------------ccc
Confidence 9999999999976432 455555443 110
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC-CCCCccccch
Q 004989 217 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIY 295 (720)
Q Consensus 217 ~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sDIw 295 (720)
.. .....++..|+|||.+.+ ..++.++|||
T Consensus 175 ~~-------------------------------------------------~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~ 205 (274)
T cd05076 175 LS-------------------------------------------------REERVERIPWIAPECVPGGNSLSTAADKW 205 (274)
T ss_pred cc-------------------------------------------------ccccccCCcccCchhhcCCCCCCcHHHHH
Confidence 00 000245778999999876 4489999999
Q ss_pred hhhchhhhccc----cCCCCchHHHHHHHhhc-CCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004989 296 RLGVLLFELFC----PFSTGEEKTRTMSSLRH-RVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 296 SLGvll~eLlt----pf~~~~~~~~~~~~l~~-~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~h 361 (720)
||||++|||++ ||....... ....+.. ...|+ ...+...+|+.+||+.+|++|||+.++|++
T Consensus 206 slG~~l~el~~~g~~p~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~li~~cl~~~p~~Rps~~~il~~ 272 (274)
T cd05076 206 SFGTTLLEICFDGEVPLKERTPSE-KERFYEKKHRLPE---PSCKELATLISQCLTYEPTQRPSFRTILRD 272 (274)
T ss_pred HHHHHHHHHHhCCCCCccccChHH-HHHHHHhccCCCC---CCChHHHHHHHHHcccChhhCcCHHHHHHh
Confidence 99999999964 555433221 1111221 11222 234567799999999999999999999863
No 277
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=99.96 E-value=3.2e-28 Score=252.22 Aligned_cols=205 Identities=16% Similarity=0.133 Sum_probs=155.7
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~-~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+..+|..++++++||||+++++ .+.. ..++++||| .+++|.+++.+.. ..+++..++.++.||+.||.|||++
T Consensus 42 ~~~~e~~~l~~l~h~~iv~~~~-~~~~----~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~ 116 (257)
T cd05040 42 DFLKEAAIMHSLDHENLIRLYG-VVLT----HPLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESK 116 (257)
T ss_pred HHHHHHHHHhhcCCCCccceeE-EEcC----CeEEEEEEecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhC
Confidence 4457888999999999999999 4433 367999999 8999999995544 4689999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
|++|+||||+||+++.++.+||+|||.+...+..... +
T Consensus 117 ~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~--------------------------------~---------- 154 (257)
T cd05040 117 RFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDH--------------------------------Y---------- 154 (257)
T ss_pred CccccccCcccEEEecCCEEEeccccccccccccccc--------------------------------e----------
Confidence 9999999999999999999999999987443211000 0
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhch
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
.. .....++..|+|||.+.+..++.++|||||||+
T Consensus 155 -------------------------~~--------------------~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~ 189 (257)
T cd05040 155 -------------------------VM--------------------EEHLKVPFAWCAPESLRTRTFSHASDVWMFGVT 189 (257)
T ss_pred -------------------------ec--------------------ccCCCCCceecCHHHhcccCcCchhhhHHHHHH
Confidence 00 001245778999999988889999999999999
Q ss_pred hhhccc----cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 301 LFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 301 l~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
+|||++ ||...... .....+............. +...+++.+||..+|++||++.++++
T Consensus 190 l~el~t~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 253 (257)
T cd05040 190 LWEMFTYGEEPWAGLSGS-QILKKIDKEGERLERPEACPQDIYNVMLQCWAHNPADRPTFAALRE 253 (257)
T ss_pred HHHHHhCCCCCCCCCCHH-HHHHHHHhcCCcCCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHH
Confidence 999997 55433333 2333333211111112223 34559999999999999999999985
No 278
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=99.96 E-value=2e-28 Score=257.30 Aligned_cols=203 Identities=14% Similarity=0.168 Sum_probs=150.6
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC------CCCCHHHHHHHHHHHHHHHHHH
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK------RSVDVYECLHIFRQIVEIVYAA 137 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~------~~l~~~~~~~i~~QIl~aL~yL 137 (720)
.+|..+++.++||||+++++ ++.... ..+++||| .|++|.+++.... ..+++..++.++.||+.||.||
T Consensus 57 ~~e~~~l~~l~~~~i~~~~~-~~~~~~---~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~L 132 (277)
T cd05036 57 LMEALIMSKFNHQNIVRLIG-VSFERL---PRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYL 132 (277)
T ss_pred HHHHHHHHhCCCCCEeeEEE-EEccCC---CcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 36777899999999999999 443332 46899999 8999999994432 2489999999999999999999
Q ss_pred HHCCceeccCCCCcEEEccCC---ceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhccccccccccc
Q 004989 138 HSQGIVVHNVRPSCFVMSSFN---HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVT 214 (720)
Q Consensus 138 Hs~gIvHrDLKP~NILl~~~~---~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~ 214 (720)
|++|++||||||+||+++.++ .++|+|||.++...... .+.
T Consensus 133 H~~~ivH~dlkp~nil~~~~~~~~~~kl~dfg~~~~~~~~~---------------------------------~~~--- 176 (277)
T cd05036 133 EENHFIHRDIAARNCLLTCKGPGRVAKIADFGMARDIYRAS---------------------------------YYR--- 176 (277)
T ss_pred HHCCEeecccchheEEEeccCCCcceEeccCccccccCCcc---------------------------------cee---
Confidence 999999999999999998654 58998888774321100 000
Q ss_pred CCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccc
Q 004989 215 APTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDI 294 (720)
Q Consensus 215 ~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDI 294 (720)
.......+..|+|||++.+..++.++||
T Consensus 177 ----------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di 204 (277)
T cd05036 177 ----------------------------------------------------KGGRAMLPIKWMPPEAFLDGIFTSKTDV 204 (277)
T ss_pred ----------------------------------------------------cCCCCCccHhhCCHHHHhcCCcCchhHH
Confidence 0000133567999999988889999999
Q ss_pred hhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcC
Q 004989 295 YRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 295 wSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~h 361 (720)
|||||++|||++ ||...... ..+..+.....+ ..+... +...+|+.+||..+|++||++.++++|
T Consensus 205 wslG~il~el~~~g~~pf~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~ 274 (277)
T cd05036 205 WSFGVLLWEIFSLGYMPYPGRTNQ-EVMEFVTGGGRL-DPPKGCPGPVYRIMTDCWQHTPEDRPNFATILER 274 (277)
T ss_pred HHHHHHHHHHHcCCCCCCCCCCHH-HHHHHHHcCCcC-CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 999999999996 66654333 222223222111 222223 445599999999999999999999975
No 279
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=99.96 E-value=2.7e-28 Score=257.91 Aligned_cols=212 Identities=14% Similarity=0.119 Sum_probs=159.9
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC---------CCCCHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---------RSVDVYECLHIFRQIVE 132 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~---------~~l~~~~~~~i~~QIl~ 132 (720)
+..+|..++..++||||+++++ ++.... ..|++||| .+++|.+++.+.. ..++...+..++.||+.
T Consensus 55 ~~~~e~~~l~~l~~~~i~~~~~-~~~~~~---~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 130 (288)
T cd05061 55 EFLNEASVMKGFTCHHVVRLLG-VVSKGQ---PTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 130 (288)
T ss_pred HHHHHHHHHHhCCCCCeeeEEE-EEcCCC---CcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHH
Confidence 3346777899999999999999 444443 57999999 8999999995321 23467788999999999
Q ss_pred HHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhccccccccc
Q 004989 133 IVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQL 212 (720)
Q Consensus 133 aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgl 212 (720)
||.|||++||+||||||+||+++.++.++|+|||+++..... ++.
T Consensus 131 ~l~~lH~~~i~H~dikp~nili~~~~~~~L~Dfg~~~~~~~~----------------------------------~~~- 175 (288)
T cd05061 131 GMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYET----------------------------------DYY- 175 (288)
T ss_pred HHHHHHhCCCcCCCCChheEEEcCCCcEEECcCCcccccccc----------------------------------ccc-
Confidence 999999999999999999999999999999999887432110 000
Q ss_pred ccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccc
Q 004989 213 VTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCAS 292 (720)
Q Consensus 213 a~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~s 292 (720)
.......++..|+|||.+.+..++.++
T Consensus 176 -----------------------------------------------------~~~~~~~~~~~y~~pE~~~~~~~~~~~ 202 (288)
T cd05061 176 -----------------------------------------------------RKGGKGLLPVRWMAPESLKDGVFTTSS 202 (288)
T ss_pred -----------------------------------------------------cccCCCcccccccCHHHhccCCCChHh
Confidence 000012456779999999888899999
Q ss_pred cchhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc------Cc
Q 004989 293 DIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ------SE 362 (720)
Q Consensus 293 DIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~------hp 362 (720)
|||||||++|||++ ||...... .....+.....++......+...+++.+||+++|++|||+.++++ ||
T Consensus 203 DvwslG~~l~el~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~ 281 (288)
T cd05061 203 DMWSFGVVLWEITSLAEQPYQGLSNE-QVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHP 281 (288)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCCCHH-HHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCC
Confidence 99999999999997 56543332 333444333333322222345669999999999999999999987 88
Q ss_pred ccCCC
Q 004989 363 FLNEP 367 (720)
Q Consensus 363 ~~~~~ 367 (720)
||.+.
T Consensus 282 ~~~~~ 286 (288)
T cd05061 282 SFPEV 286 (288)
T ss_pred CCCCC
Confidence 88764
No 280
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.96 E-value=2.6e-28 Score=252.52 Aligned_cols=206 Identities=17% Similarity=0.233 Sum_probs=158.8
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
..+|..+++.++||||+++++ .+.... ..|+++|| .+++|.+++.. ....+++..++.++.||+.||.|||+.|
T Consensus 46 ~~~E~~~l~~~~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 121 (257)
T cd08225 46 SKKEVILLAKMKHPNIVTFFA-SFQENG---RLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRK 121 (257)
T ss_pred HHHHHHHHHhCCCCChhhhhh-eeccCC---eEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 346778999999999999999 454443 67999999 89999999944 3335899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCc-eEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 142 IVVHNVRPSCFVMSSFNH-VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~-vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
|+|+||||+||+++.++. ++++|||.+...+.. .+.
T Consensus 122 i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~---------------------------------~~~---------- 158 (257)
T cd08225 122 ILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDS---------------------------------MEL---------- 158 (257)
T ss_pred cccccCCHHHEEEcCCCCeEEecccccchhccCC---------------------------------ccc----------
Confidence 999999999999997754 699888876332111 000
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhch
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
.....|++.|+|||.+.+..++.++|+|||||+
T Consensus 159 -----------------------------------------------~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~i 191 (257)
T cd08225 159 -----------------------------------------------AYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCV 191 (257)
T ss_pred -----------------------------------------------ccccCCCccccCHHHHcCCCCCchhhHHHHHHH
Confidence 001357889999999988889999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004989 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
+|||++ ||........ ...+.....++..........+++.+||..+|++|||+.++++||||
T Consensus 192 l~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~~~~ 257 (257)
T cd08225 192 LYELCTLKHPFEGNNLHQL-VLKICQGYFAPISPNFSRDLRSLISQLFKVSPRDRPSITSILKRPFL 257 (257)
T ss_pred HHHHHhCCCCCCCccHHHH-HHHHhcccCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHhhCCCC
Confidence 999998 5554433322 22333333333322233455699999999999999999999999997
No 281
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=99.96 E-value=2.3e-28 Score=256.32 Aligned_cols=208 Identities=16% Similarity=0.245 Sum_probs=159.1
Q ss_pred hchhhhhhcccCC---CCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGD---HLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 63 r~~~e~~~L~~l~---HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
+.++|..+++.+. ||||+++++ .+..+. .+|++||| .|++|.+++... .+++..++.++.||+.||.|||
T Consensus 45 ~~~~e~~~l~~l~~~~~~~vi~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~--~l~~~~~~~i~~~i~~~l~~lh 118 (277)
T cd06917 45 DIQREVALLSQLRQSQPPNITKYYG-SYLKGP---RLWIIMEYAEGGSVRTLMKAG--PIAEKYISVIIREVLVALKYIH 118 (277)
T ss_pred HHHHHHHHHHHhccCCCCCeeeEee-eeeeCC---EEEEEEecCCCCcHHHHHHcc--CCCHHHHHHHHHHHHHHHHHHH
Confidence 3446677777776 999999999 444432 57999999 899999998553 5899999999999999999999
Q ss_pred HCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCC
Q 004989 139 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
+.||+|+||+|+||+++.++.++++|||.+........
T Consensus 119 ~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~------------------------------------------ 156 (277)
T cd06917 119 KVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSS------------------------------------------ 156 (277)
T ss_pred hCCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCcc------------------------------------------
Confidence 99999999999999999999999999987743211100
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC-CCCccccchhh
Q 004989 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRL 297 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSL 297 (720)
......|+..|+|||.+.+. .++.++|+|||
T Consensus 157 ------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~sl 188 (277)
T cd06917 157 ------------------------------------------------KRSTFVGTPYWMAPEVITEGKYYDTKADIWSL 188 (277)
T ss_pred ------------------------------------------------ccccccCCcceeCHHHhccCCccccchhHHHH
Confidence 00113578899999998754 37899999999
Q ss_pred hchhhhccc---cCCCCchHHHHHHHhhcCCCCccccc-cC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004989 298 GVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL-KF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 298 Gvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~-~~-p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
||++|+|++ ||....... ....+... .++.+.. .. +...+|+.+||..||++||++.+++.||||+...
T Consensus 189 G~~l~~ll~g~~p~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~~~~~~~~ 262 (277)
T cd06917 189 GITIYEMATGNPPYSDVDAFR-AMMLIPKS-KPPRLEDNGYSKLLREFVAACLDEEPKERLSAEELLKSKWIKAHS 262 (277)
T ss_pred HHHHHHHHhCCCCCCCCChhh-hhhccccC-CCCCCCcccCCHHHHHHHHHHcCCCcccCcCHHHHhhChHhhccc
Confidence 999999999 565443322 22222222 2333322 13 3455999999999999999999999999997763
No 282
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=99.96 E-value=3.6e-28 Score=253.48 Aligned_cols=204 Identities=13% Similarity=0.140 Sum_probs=156.8
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..+|.+++||||+++++ ++.... ..+++||| .+++|.+++......+++..++.++.||+.||.|||++||
T Consensus 52 ~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i 127 (266)
T cd05033 52 FLTEASIMGQFDHPNIIRLEG-VVTKSR---PVMIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNY 127 (266)
T ss_pred HHHHHHHHHhCCCCCcceEeE-EEecCC---ceEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 346777899999999999999 444432 57999999 8999999996655569999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+|+||||+||+++.++.++++|||.+....... ..+
T Consensus 128 ~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~--------------------------------~~~------------ 163 (266)
T cd05033 128 VHRDLAARNILVNSNLVCKVSDFGLSRRLEDSE--------------------------------ATY------------ 163 (266)
T ss_pred ccCCCCcceEEEcCCCCEEECccchhhcccccc--------------------------------cce------------
Confidence 999999999999999999999998874432100 000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......++..|+|||.+.+..++.++|||||||++|
T Consensus 164 --------------------------------------------~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~ 199 (266)
T cd05033 164 --------------------------------------------TTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMW 199 (266)
T ss_pred --------------------------------------------eccCCCCCccccChhhhccCCCccccchHHHHHHHH
Confidence 000013467899999999888999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 303 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
+|++ ||...... .....+.....++......+...+|+.+||+.+|++||++.++++
T Consensus 200 ~l~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~ 260 (266)
T cd05033 200 EVMSYGERPYWDMSNQ-DVIKAVEDGYRLPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVS 260 (266)
T ss_pred HHHccCCCCCCCCCHH-HHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 9987 55443322 334444443332322233344559999999999999999999986
No 283
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.95 E-value=1.4e-28 Score=265.14 Aligned_cols=218 Identities=17% Similarity=0.197 Sum_probs=161.9
Q ss_pred chhhhhhcccCCCCCceecccceeecC-CCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENE-AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~-~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++..++||||+++++.+.... .....+|++|||.+++|.+++.... .+++..++.++.||+.||.|||++||
T Consensus 46 ~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~-~l~~~~~~~i~~~l~~~l~~LH~~gi 124 (330)
T cd07834 46 ILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVYIVTELMETDLHKVIKSPQ-PLTDDHIQYFLYQILRGLKYLHSANV 124 (330)
T ss_pred HHHHHHHHHhcCCcchhhhhhhhcccCcccccceEEEecchhhhHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 346777899999999999999443332 2334679999996679999995544 69999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.++|+|||.+.........
T Consensus 125 ~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~~~--------------------------------------------- 159 (330)
T cd07834 125 IHRDLKPSNILVNSNCDLKICDFGLARGVDPDEDE--------------------------------------------- 159 (330)
T ss_pred ecCCCCHHHEEEcCCCCEEEcccCceEeecccccc---------------------------------------------
Confidence 99999999999999999999999887432111000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC-CCCccccchhhhchh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLL 301 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGvll 301 (720)
+.......++++|+|||.+.+. .++.++|||||||++
T Consensus 160 ------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il 197 (330)
T cd07834 160 ------------------------------------------KGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIF 197 (330)
T ss_pred ------------------------------------------cccccccccccCcCCceeeecccCCCcchhHHHHHHHH
Confidence 0000113578999999999888 689999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhc--CCCCcc----------------------------ccccCchHHHHHHHcCCCC
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRH--RVLPPQ----------------------------LLLKFPKEASFCLWLLHPE 348 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~--~~~p~~----------------------------~~~~~p~~~~Li~~~L~~d 348 (720)
|+|++ ||...... ..+..+.. +..++. .....+...+||.+||+++
T Consensus 198 ~~l~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~ 276 (330)
T cd07834 198 AELLTRKPLFPGRDYI-DQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFD 276 (330)
T ss_pred HHHHcCCCCcCCCCHH-HHHHHHHHhcCCCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCC
Confidence 99999 55443322 11111111 000000 0112234459999999999
Q ss_pred CCCCCChHHHHcCcccCCCccc
Q 004989 349 PSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 349 P~~Rpta~eiL~hp~~~~~~~~ 370 (720)
|.+|||+.++++||||......
T Consensus 277 P~~Rpt~~~ll~~~~~~~~~~~ 298 (330)
T cd07834 277 PKKRITADEALAHPYLAQLHDP 298 (330)
T ss_pred hhhCCCHHHHHhCccHHhhccc
Confidence 9999999999999999987553
No 284
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=99.95 E-value=4.3e-28 Score=250.21 Aligned_cols=204 Identities=16% Similarity=0.166 Sum_probs=156.7
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+...|..++..++||||+++++ ++.... ..+++||| .+++|.+++......+++..++.++.||+.||.|||++|
T Consensus 38 ~~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ 113 (250)
T cd05085 38 KFLSEARILKQYDHPNIVKLIG-VCTQRQ---PIYIVMELVPGGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKN 113 (250)
T ss_pred HHHHHHHHHHhCCCCCcCeEEE-EEecCC---ccEEEEECCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 4446778899999999999999 554443 57999999 899999999655556899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
++||||||+||+++.++.++++|||++...... .+ .
T Consensus 114 ~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~----------------------------------~~---~------- 149 (250)
T cd05085 114 CIHRDLAARNCLVGENNVLKISDFGMSRQEDDG----------------------------------IY---S------- 149 (250)
T ss_pred eeecccChheEEEcCCCeEEECCCccceecccc----------------------------------cc---c-------
Confidence 999999999999999999999998877321000 00 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......++..|+|||++.+..++.++|||||||++
T Consensus 150 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll 184 (250)
T cd05085 150 ---------------------------------------------SSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILL 184 (250)
T ss_pred ---------------------------------------------cCCCCCCcccccCHHHhccCCCCchhHHHHHHHHH
Confidence 00001235679999999888899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|+|++ ||...... .....+.............+...+|+.+||..+|++||++.++++
T Consensus 185 ~~~~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 246 (250)
T cd05085 185 WETFSLGVCPYPGMTNQ-QAREQVEKGYRMSCPQKCPDDVYKVMQRCWDYKPENRPKFSELQK 246 (250)
T ss_pred HHHhcCCCCCCCCCCHH-HHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 99997 66554333 333444433222222223345569999999999999999999976
No 285
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.95 E-value=3.7e-28 Score=262.70 Aligned_cols=225 Identities=17% Similarity=0.178 Sum_probs=161.8
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..+|..++.+++||||+++++ ++..+. .++++|||..++|.+++.... .+++..+..++.||+.||.|||+.||+
T Consensus 67 ~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~l~~~l~~~~-~~~~~~~~~~~~ql~~aL~~LH~~~i~ 141 (335)
T PTZ00024 67 TLRELKIMNEIKHENIMGLVD-VYVEGD---FINLVMDIMASDLKKVVDRKI-RLTESQVKCILLQILNGLNVLHKWYFM 141 (335)
T ss_pred HHHHHHHHHhCCCcceeeeeE-EEecCC---cEEEEEeccccCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 447788999999999999999 444443 679999996679999995443 489999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
|+||||+||+++.++.++|+|||.+...+.......... +... .
T Consensus 142 H~dl~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~--------------------------~~~~----~------ 185 (335)
T PTZ00024 142 HRDLSPANIFINSKGICKIADFGLARRYGYPPYSDTLSK--------------------------DETM----Q------ 185 (335)
T ss_pred cccccHHHeEECCCCCEEECCccceeecccccccccccc--------------------------cccc----c------
Confidence 999999999999999999999998865433211100000 0000 0
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC-CCccccchhhhchhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLF 302 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGvll~ 302 (720)
.........+++.|+|||.+.+.. ++.++|||||||++|
T Consensus 186 ----------------------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~ 225 (335)
T PTZ00024 186 ----------------------------------------RREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFA 225 (335)
T ss_pred ----------------------------------------ccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHH
Confidence 000001135688999999997654 799999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhc---CCC--------------------Cccc----cccCchHHHHHHHcCCCCCCCC
Q 004989 303 ELFC---PFSTGEEKTRTMSSLRH---RVL--------------------PPQL----LLKFPKEASFCLWLLHPEPSGR 352 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~---~~~--------------------p~~~----~~~~p~~~~Li~~~L~~dP~~R 352 (720)
||++ ||....... .+..+.. ... ++.+ ........+|+.+||.++|++|
T Consensus 226 el~tg~~p~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R 304 (335)
T PTZ00024 226 ELLTGKPLFPGENEID-QLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLER 304 (335)
T ss_pred HHHhCCCCCCCCCHHH-HHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhc
Confidence 9999 554443322 1111111 000 0000 1112344599999999999999
Q ss_pred CChHHHHcCcccCCCccc
Q 004989 353 PKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 353 pta~eiL~hp~~~~~~~~ 370 (720)
||++|+|.||||+.....
T Consensus 305 ~s~~~~l~~~~~~~~~~~ 322 (335)
T PTZ00024 305 ISAKEALKHEYFKSDPLP 322 (335)
T ss_pred cCHHHHhcCcccCCCCCC
Confidence 999999999999976443
No 286
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.95 E-value=2.8e-28 Score=286.44 Aligned_cols=103 Identities=10% Similarity=0.093 Sum_probs=90.9
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++..++||||+++++ ++.... .+|+|||| .|++|.++|...+ .+++..++.|+.||+.||+|||++|
T Consensus 50 ~~~~E~~~l~~l~hp~Iv~~~~-~~~~~~---~~~lVmEy~~g~~L~~li~~~~-~l~~~~~~~i~~qil~aL~yLH~~g 124 (669)
T cd05610 50 QVQAERDALALSKSPFIVHLYY-SLQSAN---NVYLVMEYLIGGDVKSLLHIYG-YFDEEMAVKYISEVALALDYLHRHG 124 (669)
T ss_pred HHHHHHHHHHhcCCCCcCeEEE-EEEECC---EEEEEEeCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 4457777888999999999998 554443 68999999 8999999995543 4899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccC
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSD 170 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~ 170 (720)
||||||||+||||+.++.++|+|||+++.
T Consensus 125 IiHrDLKP~NILl~~~g~vkL~DFGls~~ 153 (669)
T cd05610 125 IIHRDLKPDNMLISNEGHIKLTDFGLSKV 153 (669)
T ss_pred EEeCCccHHHEEEcCCCCEEEEeCCCCcc
Confidence 99999999999999999999999999874
No 287
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=99.95 E-value=3.8e-28 Score=255.54 Aligned_cols=206 Identities=17% Similarity=0.243 Sum_probs=154.5
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~-~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..|..++++++||||+++++ ++.++ ...|++|||.+++|.+++.... ..+++..++.++.||+.||.|||++|++
T Consensus 46 ~~E~~~l~~l~~~~iv~~~~-~~~~~---~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~ 121 (283)
T cd07835 46 IREISLLKELNHPNIVRLLD-VVHSE---NKLYLVFEFLDLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVL 121 (283)
T ss_pred HHHHHHHHhcCCCCccCHhh-eeccC---CeEEEEEeccCcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 35777899999999999999 44444 3679999996679999994433 3589999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||+|+||+++.++.++|+|||.+...+.... .
T Consensus 122 H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~--------------------------------~-------------- 155 (283)
T cd07835 122 HRDLKPQNLLIDREGALKLADFGLARAFGVPVR--------------------------------T-------------- 155 (283)
T ss_pred CCCCCHHHEEEcCCCcEEEeecccccccCCCcc--------------------------------c--------------
Confidence 999999999999999999999988743211100 0
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC-CCCccccchhhhchhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLF 302 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGvll~ 302 (720)
.....+++.|+|||++.+. .++.++|||||||++|
T Consensus 156 --------------------------------------------~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~ 191 (283)
T cd07835 156 --------------------------------------------YTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFA 191 (283)
T ss_pred --------------------------------------------cCccccccCCCCCceeecCcccCcHHHHHHHHHHHH
Confidence 0012457889999988765 4789999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCC-------------------CC----c---c-ccccCchHHHHHHHcCCCCCCCC
Q 004989 303 ELFC---PFSTGEEKTRTMSSLRHRV-------------------LP----P---Q-LLLKFPKEASFCLWLLHPEPSGR 352 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~-------------------~p----~---~-~~~~~p~~~~Li~~~L~~dP~~R 352 (720)
+|++ ||................. ++ + . .....+...+|+.+||+++|.+|
T Consensus 192 ~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R 271 (283)
T cd07835 192 EMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKR 271 (283)
T ss_pred HHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhC
Confidence 9999 5554433222222111100 00 0 0 11122344599999999999999
Q ss_pred CChHHHHcCccc
Q 004989 353 PKMGELLQSEFL 364 (720)
Q Consensus 353 pta~eiL~hp~~ 364 (720)
||+.|++.||||
T Consensus 272 pt~~~il~~~~~ 283 (283)
T cd07835 272 ISAKAALQHPYF 283 (283)
T ss_pred cCHHHHhcCCCC
Confidence 999999999997
No 288
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=99.95 E-value=4.4e-28 Score=248.71 Aligned_cols=205 Identities=17% Similarity=0.246 Sum_probs=159.1
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
...+|..++++++||||+++++ ++.... ..++++|| .|++|.+++......+++..+..++.||+.||.|||+.|
T Consensus 43 ~~~~e~~~l~~l~~~~i~~~~~-~~~~~~---~~~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~ 118 (253)
T cd05122 43 KIINEIQILKKCKHPNIVKYYG-SYLKKD---ELWIVMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNG 118 (253)
T ss_pred HHHHHHHHHHhCCCCCEeEEEE-EEecCC---eEEEEEecCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCC
Confidence 3446777899999999999999 444442 57999999 889999999665456999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
++|+||+|+||+++.++.++|+|||.+...+....
T Consensus 119 i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~--------------------------------------------- 153 (253)
T cd05122 119 IIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA--------------------------------------------- 153 (253)
T ss_pred EecCCCCHHHEEEccCCeEEEeecccccccccccc---------------------------------------------
Confidence 99999999999999999999999988743211100
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
.....|+..|+|||.+.+..++.++||||||+++
T Consensus 154 ----------------------------------------------~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il 187 (253)
T cd05122 154 ----------------------------------------------RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITA 187 (253)
T ss_pred ----------------------------------------------ccceecCCcccCHHHHcCCCCCccccHHHHHHHH
Confidence 0013568899999999888899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCcccccc--CchHHHHHHHcCCCCCCCCCChHHHHcCcc
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLK--FPKEASFCLWLLHPEPSGRPKMGELLQSEF 363 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~--~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~ 363 (720)
|+|++ ||.......... .......+...... .....+|+.+||..||++|||+.++|+|||
T Consensus 188 ~~l~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~~~ 253 (253)
T cd05122 188 IELAEGKPPYSELPPMKALF-KIATNGPPGLRNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKHPF 253 (253)
T ss_pred HHHHhCCCCCCCCchHHHHH-HHHhcCCCCcCcccccCHHHHHHHHHHccCChhhCCCHHHHhcCCC
Confidence 99999 555443322222 22222222211111 234459999999999999999999999998
No 289
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=99.95 E-value=4.2e-28 Score=250.14 Aligned_cols=206 Identities=21% Similarity=0.272 Sum_probs=161.3
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC---CCCCCHHHHHHHHHHHHHHHHHHHH
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---KRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~---~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
...|..++..++|||++++++ .+... ..+++++|| .+++|.+++... ...+++..+..++.||+.||.|||+
T Consensus 46 ~~~e~~~l~~l~~~~~~~~~~-~~~~~---~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~ 121 (258)
T cd08215 46 ALNEVKILKKLNHPNIIKYYE-SFEEK---GKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHS 121 (258)
T ss_pred HHHHHHHHHhcCCCChhheEE-EEecC---CEEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHh
Confidence 346777899999999999999 44333 368999999 889999999553 3569999999999999999999999
Q ss_pred CCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCC
Q 004989 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+|++|+||+|+||+++.++.++|+|||.+...+....
T Consensus 122 ~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~------------------------------------------- 158 (258)
T cd08215 122 RKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVD------------------------------------------- 158 (258)
T ss_pred CCEecccCChHHeEEcCCCcEEECCccceeecccCcc-------------------------------------------
Confidence 9999999999999999999999999887733211100
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhc
Q 004989 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
......|++.|+|||.+.+..++.++|+||||+
T Consensus 159 -----------------------------------------------~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~ 191 (258)
T cd08215 159 -----------------------------------------------LAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGC 191 (258)
T ss_pred -----------------------------------------------eecceeeeecccChhHhccCCCCccccHHHHHH
Confidence 000135788999999998888999999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004989 300 LLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
++|+|++ ||..... ......+.....++..........+++.+||..+|++|||+.++|+||||
T Consensus 192 ~~~~l~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 258 (258)
T cd08215 192 VLYELCTLKHPFEGENL-LELALKILKGQYPPIPSQYSSELRNLVSSLLQKDPEERPSIAQILQSPFI 258 (258)
T ss_pred HHHHHHcCCCCCCCCcH-HHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCCCC
Confidence 9999999 5554433 23333343333333222223344599999999999999999999999997
No 290
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=99.95 E-value=2.8e-28 Score=252.53 Aligned_cols=197 Identities=16% Similarity=0.189 Sum_probs=148.8
Q ss_pred hhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 62 LRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 62 ~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
.+..+|..+|+.++||||+++++ ++... ..+++||| .+++|.+++......++...++.++.||+.||.|||++
T Consensus 46 ~~~~~e~~~l~~l~h~~i~~~~~-~~~~~----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~ 120 (259)
T cd05037 46 LAFFETASLMSQLSHKHLVKLYG-VCVRD----ENIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDK 120 (259)
T ss_pred HHHHHHHHHHHcCCCcchhheee-EEecC----CcEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhC
Confidence 34446777999999999999999 44332 35899999 89999999966554689999999999999999999999
Q ss_pred CceeccCCCCcEEEccCC-------ceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccc
Q 004989 141 GIVVHNVRPSCFVMSSFN-------HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLV 213 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~-------~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla 213 (720)
||+||||||+||+++.++ .++++|||.+......
T Consensus 121 ~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~~~~~--------------------------------------- 161 (259)
T cd05037 121 KLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVLSR--------------------------------------- 161 (259)
T ss_pred CeecccCccceEEEecCccccCCceeEEeCCCCcccccccc---------------------------------------
Confidence 999999999999999877 6888777766321100
Q ss_pred cCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC--CCCcc
Q 004989 214 TAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA--PVSCA 291 (720)
Q Consensus 214 ~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~--~~s~~ 291 (720)
....++..|+|||++.+. .++.+
T Consensus 162 -------------------------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~~ 186 (259)
T cd05037 162 -------------------------------------------------------EERVERIPWIAPECIRNGQASLTIA 186 (259)
T ss_pred -------------------------------------------------------cccccCCCccChhhhcCCCCCcchh
Confidence 002456779999999877 68999
Q ss_pred ccchhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 292 SDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 292 sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
+|||||||++|||++ ||...... ............+ ........+|+.+||..+|.+|||+.++++
T Consensus 187 ~Di~slG~~~~~l~~~~~~p~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 256 (259)
T cd05037 187 ADKWSFGTTLLEICSNGEEPLSTLSSS-EKERFYQDQHRLP--MPDCAELANLINQCWTYDPTKRPSFRAILR 256 (259)
T ss_pred hHHHHHHHHHHHHHhCCCCCcccCCch-hHHHHHhcCCCCC--CCCchHHHHHHHHHhccChhhCCCHHHHHH
Confidence 999999999999987 34333211 1111111111111 112256679999999999999999999985
No 291
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.95 E-value=3.2e-28 Score=257.89 Aligned_cols=210 Identities=19% Similarity=0.261 Sum_probs=155.6
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..|..++++++||||+++++ ++.+.. ..|+||||.+++|.+++.. ....+++..++.++.||+.||.|||++||+
T Consensus 49 ~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~ 124 (294)
T PLN00009 49 IREISLLKEMQHGNIVRLQD-VVHSEK---RLYLVFEYLDLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVL 124 (294)
T ss_pred HHHHHHHHhccCCCEeeEEE-EEecCC---eEEEEEecccccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 36778999999999999999 454443 6899999976789988843 333468889999999999999999999999
Q ss_pred eccCCCCcEEEcc-CCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 144 VHNVRPSCFVMSS-FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 144 HrDLKP~NILl~~-~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
||||||+||+++. ++.+|++|||.+...+....
T Consensus 125 H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~~---------------------------------------------- 158 (294)
T PLN00009 125 HRDLKPQNLLIDRRTNALKLADFGLARAFGIPVR---------------------------------------------- 158 (294)
T ss_pred CCCCCcceEEEECCCCEEEEcccccccccCCCcc----------------------------------------------
Confidence 9999999999985 55789999888743221100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC-CCCccccchhhhchh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLL 301 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGvll 301 (720)
......+++.|+|||.+.+. .++.++|||||||++
T Consensus 159 --------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~ 194 (294)
T PLN00009 159 --------------------------------------------TFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIF 194 (294)
T ss_pred --------------------------------------------ccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHH
Confidence 00013568899999998764 478999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhc--CC-----------------C---Ccc-----ccccCchHHHHHHHcCCCCCCC
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRH--RV-----------------L---PPQ-----LLLKFPKEASFCLWLLHPEPSG 351 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~--~~-----------------~---p~~-----~~~~~p~~~~Li~~~L~~dP~~ 351 (720)
|+|++ ||............+.. .. . ++. .....+...+|+.+||+.+|++
T Consensus 195 ~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~ 274 (294)
T PLN00009 195 AEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSK 274 (294)
T ss_pred HHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhh
Confidence 99999 55544333222222110 00 0 000 0112344569999999999999
Q ss_pred CCChHHHHcCcccCCCc
Q 004989 352 RPKMGELLQSEFLNEPR 368 (720)
Q Consensus 352 Rpta~eiL~hp~~~~~~ 368 (720)
||++.++++||||....
T Consensus 275 Rps~~~~l~~~~~~~~~ 291 (294)
T PLN00009 275 RITARAALEHEYFKDLG 291 (294)
T ss_pred CcCHHHHhcCchHhHHh
Confidence 99999999999998763
No 292
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=99.95 E-value=4.3e-28 Score=251.63 Aligned_cols=203 Identities=19% Similarity=0.204 Sum_probs=154.2
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
...|..+++.++|||||++++ ++... .++++||| .+++|.++|.+.. .+++..++.++.||+.||.|||..|+
T Consensus 43 ~~~e~~~l~~l~h~~iv~~~~-~~~~~----~~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lh~~~i 116 (257)
T cd05060 43 FLREASVMAQLDHPCIVRLIG-VCKGE----PLMLVMELAPLGPLLKYLKKRR-EIPVSDLKELAHQVAMGMAYLESKHF 116 (257)
T ss_pred HHHHHHHHHhcCCCCeeeEEE-EEcCC----ceEEEEEeCCCCcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHhhcCe
Confidence 336778999999999999999 44432 47999999 8899999995544 58999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+|+||||+|||++.++.++|+|||.+...+... .+
T Consensus 117 ~H~di~p~nili~~~~~~kl~df~~~~~~~~~~---------------------------------~~------------ 151 (257)
T cd05060 117 VHRDLAARNVLLVNRHQAKISDFGMSRALGAGS---------------------------------DY------------ 151 (257)
T ss_pred eccCcccceEEEcCCCcEEeccccccceeecCC---------------------------------cc------------
Confidence 999999999999999999999998874321110 00
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
+ . ......++..|+|||.+.+..++.++|||||||++|
T Consensus 152 ---------~--------------~-------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ 189 (257)
T cd05060 152 ---------Y--------------R-------------------ATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLW 189 (257)
T ss_pred ---------c--------------c-------------------cccCccccccccCHHHhcCCCCCccchHHHHHHHHH
Confidence 0 0 000012356799999998888999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 303 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
||++ ||...... .....+......+......+...+|+.+||.++|.+||++.++++
T Consensus 190 ~~~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~ 250 (257)
T cd05060 190 EAFSYGAKPYGEMKGA-EVIAMLESGERLPRPEECPQEIYSIMLSCWKYRPEDRPTFSELES 250 (257)
T ss_pred HHHcCCCCCcccCCHH-HHHHHHHcCCcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 9996 44443332 333444433322222223345569999999999999999999975
No 293
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=99.95 E-value=4.4e-28 Score=255.26 Aligned_cols=204 Identities=17% Similarity=0.157 Sum_probs=154.3
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC--------------CCCCHHHHHHHHH
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK--------------RSVDVYECLHIFR 128 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~--------------~~l~~~~~~~i~~ 128 (720)
..+|..++..++||||+++++ ++.... ..+++||| .+++|.+++.... ..+++..++.++.
T Consensus 54 ~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 129 (280)
T cd05092 54 FQREAELLTVLQHQHIVRFYG-VCTEGR---PLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIAS 129 (280)
T ss_pred HHHHHHHHhcCCCCCCceEEE-EEecCC---ceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHH
Confidence 336677899999999999999 554443 57999999 8999999995432 2478999999999
Q ss_pred HHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhccccc
Q 004989 129 QIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRRE 208 (720)
Q Consensus 129 QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~ 208 (720)
||+.||.|||+.||+||||||+|||++.++.++|+|||++......
T Consensus 130 qi~~al~~LH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~---------------------------------- 175 (280)
T cd05092 130 QIASGMVYLASLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYST---------------------------------- 175 (280)
T ss_pred HHHHHHHHHHHCCeecccccHhhEEEcCCCCEEECCCCceeEcCCC----------------------------------
Confidence 9999999999999999999999999999999999999887322110
Q ss_pred ccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCC
Q 004989 209 DLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV 288 (720)
Q Consensus 209 Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 288 (720)
++ .. ......+++.|+|||.+.+..+
T Consensus 176 ~~----------------------------------~~--------------------~~~~~~~~~~y~aPE~~~~~~~ 201 (280)
T cd05092 176 DY----------------------------------YR--------------------VGGRTMLPIRWMPPESILYRKF 201 (280)
T ss_pred ce----------------------------------ee--------------------cCCCccccccccCHHHhccCCc
Confidence 00 00 0000235678999999998889
Q ss_pred Cccccchhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 289 SCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 289 s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
+.++|||||||++|||++ ||...... .....+..+..+.......+...+|+.+||+.||.+||++.+|++
T Consensus 202 ~~~~Di~slG~il~el~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~ 276 (280)
T cd05092 202 TTESDIWSFGVVLWEIFTYGKQPWYQLSNT-EAIECITQGRELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHS 276 (280)
T ss_pred CchhhHHHHHHHHHHHHcCCCCCCccCCHH-HHHHHHHcCccCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 999999999999999997 44433333 233333333332222233355669999999999999999999975
No 294
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=99.95 E-value=2e-28 Score=259.83 Aligned_cols=207 Identities=15% Similarity=0.199 Sum_probs=159.3
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..|..++..++||||+++++ .+.... ..|+|+|| .+++|.+++.+. .+++.++..++.||+.||.|||++|++
T Consensus 64 ~~e~~~l~~l~hp~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~--~l~~~~~~~i~~~l~~al~~LH~~gi~ 137 (293)
T cd06647 64 INEILVMRENKHPNIVNYLD-SYLVGD---ELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSNQVI 137 (293)
T ss_pred HHHHHHHhhcCCCCeeehhh-eeeeCC---cEEEEEecCCCCcHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCEe
Confidence 46777899999999999999 444433 57999999 899999999543 378999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
|+||||+||+++.++.++|+|||.+........
T Consensus 138 H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~----------------------------------------------- 170 (293)
T cd06647 138 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS----------------------------------------------- 170 (293)
T ss_pred eccCCHHHEEEcCCCCEEEccCcceeccccccc-----------------------------------------------
Confidence 999999999999999999999987732211000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......|++.|+|||.+.+..++.++|||||||++|+
T Consensus 171 -------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ 207 (293)
T cd06647 171 -------------------------------------------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIE 207 (293)
T ss_pred -------------------------------------------ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHH
Confidence 0001357889999999988889999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCCCcc-cccc-CchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004989 304 LFC---PFSTGEEKTRTMSSLRHRVLPPQ-LLLK-FPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~~p~~-~~~~-~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
|++ ||.......... .+.....+.. .... .+...+|+.+||..+|.+||++.+++.||||....
T Consensus 208 ll~g~~pf~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h~~~~~~~ 276 (293)
T cd06647 208 MVEGEPPYLNENPLRALY-LIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHPFLKIAK 276 (293)
T ss_pred HHhCCCCCCCCChhhhee-ehhcCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhcCc
Confidence 999 565543322211 1111111111 1112 23455999999999999999999999999999775
No 295
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=99.95 E-value=4.3e-28 Score=255.44 Aligned_cols=204 Identities=17% Similarity=0.136 Sum_probs=149.4
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..+|..++||||+++++ ++.... ...++++||| .+++|.+++... .+++.+++.++.||+.||.|||++||+
T Consensus 54 ~~E~~~l~~l~h~~i~~~~~-~~~~~~-~~~~~lv~e~~~~~~l~~~~~~~--~l~~~~~~~i~~~l~~~l~~lH~~~i~ 129 (283)
T cd05080 54 KKEINILKTLYHENIVKYKG-CCSEQG-GKGLQLIMEYVPLGSLRDYLPKH--KLNLAQLLLFAQQICEGMAYLHSQHYI 129 (283)
T ss_pred HHHHHHHHhCCCCCEeeEEE-EEecCC-CceEEEEecCCCCCCHHHHHHHc--CCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 36777999999999999999 443322 2357999999 999999999543 399999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+||+++.++.++|+|||.+........ .+
T Consensus 130 H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~--------------------------------~~------------- 164 (283)
T cd05080 130 HRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHE--------------------------------YY------------- 164 (283)
T ss_pred ccccChheEEEcCCCcEEEeecccccccCCcch--------------------------------hh-------------
Confidence 999999999999999999999998743211100 00
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
.. .....++..|+|||.+.+..++.++|||||||++||
T Consensus 165 ----------------------~~--------------------~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~e 202 (283)
T cd05080 165 ----------------------RV--------------------REDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYE 202 (283)
T ss_pred ----------------------cc--------------------CCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHH
Confidence 00 000134667999999988889999999999999999
Q ss_pred ccc---cCCCCchHHHH--------------HHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 304 LFC---PFSTGEEKTRT--------------MSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 304 Llt---pf~~~~~~~~~--------------~~~l~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|++ ||......... ...+.....++ ..... +...+|+..||.++|++|||+.++++
T Consensus 203 l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~ 276 (283)
T cd05080 203 LLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERGMRLP-CPKNCPQEVYILMKNCWETEAKFRPTFRSLIP 276 (283)
T ss_pred HHhCCCCCCCCcchhhhhhcccccccchhhhhhhhhcCCCCC-CCCCCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 999 44322111100 00011111111 11222 34459999999999999999999985
No 296
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=99.95 E-value=4.6e-28 Score=251.78 Aligned_cols=202 Identities=15% Similarity=0.142 Sum_probs=153.9
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
.+|..++..++||||+++++ .+.... ..+++||| .+++|.+++.. ....++...++.++.||+.||.|||+.|+
T Consensus 49 ~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i 124 (261)
T cd05072 49 LEEANLMKTLQHDKLVRLYA-VVTKEE---PIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNY 124 (261)
T ss_pred HHHHHHHHhCCCCCeeeEEE-EEcCCC---CcEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 36777899999999999998 444433 57999999 89999999943 34458999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.++|+|||.+.........
T Consensus 125 ~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~--------------------------------------------- 159 (261)
T cd05072 125 IHRDLRAANVLVSESLMCKIADFGLARVIEDNEYT--------------------------------------------- 159 (261)
T ss_pred eccccchhhEEecCCCcEEECCCccceecCCCcee---------------------------------------------
Confidence 99999999999999999999988887432110000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......++..|+|||.+.+..++.++|||||||++|
T Consensus 160 --------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ 195 (261)
T cd05072 160 --------------------------------------------AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLY 195 (261)
T ss_pred --------------------------------------------ccCCCccceecCCHHHhccCCCChhhhhhhhHHHHH
Confidence 000023467899999998888999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 303 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
+|++ ||...... .....+.+....+..........+|+.+||+.+|++||+++++++
T Consensus 196 ~l~t~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 256 (261)
T cd05072 196 EIVTYGKIPYPGMSNS-DVMSALQRGYRMPRMENCPDELYDIMKTCWKEKAEERPTFDYLQS 256 (261)
T ss_pred HHHccCCCCCCCCCHH-HHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 9997 55443332 344444443333332222234459999999999999999999874
No 297
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=99.95 E-value=4.6e-28 Score=252.97 Aligned_cols=206 Identities=15% Similarity=0.161 Sum_probs=156.4
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
....|..+|.+++||||+++++ ++..+. .+|++||| .+++|.+++......+++.+++.++.||+.||.|||++|
T Consensus 51 ~~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ 126 (267)
T cd05066 51 DFLSEASIMGQFDHPNIIHLEG-VVTKSK---PVMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMG 126 (267)
T ss_pred HHHHHHHHHHhCCCCCcceEEE-EEecCC---ccEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3346778999999999999999 554433 57999999 889999999665556899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
++||||||+||+++.++.++++|||.+.........
T Consensus 127 i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~-------------------------------------------- 162 (267)
T cd05066 127 YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEA-------------------------------------------- 162 (267)
T ss_pred EeehhhchhcEEECCCCeEEeCCCCcccccccccce--------------------------------------------
Confidence 999999999999999999999999887433111000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
.. ......++..|+|||.+.+..++.++|+|||||++
T Consensus 163 ------------------------~~-------------------~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l 199 (267)
T cd05066 163 ------------------------AY-------------------TTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVM 199 (267)
T ss_pred ------------------------ee-------------------ecCCCccceeecCHhHhccCccCchhhhHHHHHHH
Confidence 00 00001335689999999988899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||...... .....+.+...++......+...+|+.+||+++|.+||++.++++
T Consensus 200 ~ell~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 261 (267)
T cd05066 200 WEVMSYGERPYWEMSNQ-DVIKAIEEGYRLPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVS 261 (267)
T ss_pred HHHhcCCCCCcccCCHH-HHHHHHhCCCcCCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHH
Confidence 99886 55443332 233334443323332223345569999999999999999999975
No 298
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.95 E-value=2.6e-28 Score=256.18 Aligned_cols=208 Identities=20% Similarity=0.287 Sum_probs=157.3
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
+...|..+|++++||||+++++ ++.++ ..++++|||.+++|.+++......+++..++.++.||+.||.|||++||
T Consensus 44 ~~~~e~~~l~~l~~~~i~~~~~-~~~~~---~~~~~v~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i 119 (283)
T cd05118 44 TALREIKLLKELNHPNIIKLLD-VFRHK---GDLYLVFEFMDTDLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGI 119 (283)
T ss_pred HHHHHHHHHHHhcCCCcchHHH-hhccC---CCEEEEEeccCCCHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 4446778999999999999999 44444 3689999996679999996655669999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+|+||||+||+++.++.++|+|||.+...+....
T Consensus 120 ~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~---------------------------------------------- 153 (283)
T cd05118 120 LHRDLKPENLLINTEGVLKLADFGLARSFGSPVR---------------------------------------------- 153 (283)
T ss_pred eecCcCHHHEEECCCCcEEEeeeeeeEecCCCcc----------------------------------------------
Confidence 9999999999999999999999987733221100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC-CCCccccchhhhchh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLL 301 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGvll 301 (720)
......++.+|+|||.+.+. .++.++|||||||++
T Consensus 154 --------------------------------------------~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l 189 (283)
T cd05118 154 --------------------------------------------PYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIF 189 (283)
T ss_pred --------------------------------------------cccCccCcccccCcHHHhcCCCCCchhHHHHHHHHH
Confidence 00013568899999999877 589999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCC--C-------------------------cccc-ccCchHHHHHHHcCCCCCC
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRHRVL--P-------------------------PQLL-LKFPKEASFCLWLLHPEPS 350 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~--p-------------------------~~~~-~~~p~~~~Li~~~L~~dP~ 350 (720)
|+|++ ||...+.............. + +... ....+..+||.+||++||.
T Consensus 190 ~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~ 269 (283)
T cd05118 190 AELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPH 269 (283)
T ss_pred HHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcc
Confidence 99999 55443332211111110000 0 0011 1223445999999999999
Q ss_pred CCCChHHHHcCccc
Q 004989 351 GRPKMGELLQSEFL 364 (720)
Q Consensus 351 ~Rpta~eiL~hp~~ 364 (720)
+||++.+++.||||
T Consensus 270 ~Rp~~~~ll~~~~~ 283 (283)
T cd05118 270 KRITAEQALAHPYF 283 (283)
T ss_pred cCcCHHHHhhCCCC
Confidence 99999999999997
No 299
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.95 E-value=2e-28 Score=253.06 Aligned_cols=224 Identities=17% Similarity=0.179 Sum_probs=160.5
Q ss_pred hhhhhcccCCCC------CceecccceeecCCCCCcEEEEEecCCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHH
Q 004989 66 SDGVELTHGDHL------RNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 66 ~e~~~L~~l~Hp------nIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
.|..+|.++.+. -+|.+.+ +|+-. .+.|+|+|..|.++.++|.. +..+++...++.|.+||+.+|.|||
T Consensus 134 iEi~vLqki~~~DP~g~~rcv~m~~-wFdyr---ghiCivfellG~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh 209 (415)
T KOG0671|consen 134 IEIEVLQKINESDPNGKFRCVQMRD-WFDYR---GHICIVFELLGLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLH 209 (415)
T ss_pred HHHHHHHHHHhcCCCCceEEEeeeh-hhhcc---CceEEEEeccChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHH
Confidence 455567776432 2466666 45444 36799999999999999944 5667999999999999999999999
Q ss_pred HCCceeccCCCCcEEEccCCceEEeecCcc-cCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCC
Q 004989 139 SQGIVVHNVRPSCFVMSSFNHVSFIESASC-SDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~~~~~vkliDfg~a-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~ 217 (720)
+.+++|-||||+|||+.++...+.-+.+.. ... +. ..-.-+++.|||-|++..
T Consensus 210 ~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~----------------r~----------~ks~~I~vIDFGsAtf~~ 263 (415)
T KOG0671|consen 210 DLKLTHTDLKPENILFVSSEYFKTYNPKKKVCFI----------------RP----------LKSTAIKVIDFGSATFDH 263 (415)
T ss_pred hcceeecCCChheEEEeccceEEEeccCCcccee----------------cc----------CCCcceEEEecCCcceec
Confidence 999999999999999988777666433221 000 00 000124556777665432
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhh
Q 004989 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRL 297 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSL 297 (720)
.. ....+.|..|+|||++.+-+++..+||||+
T Consensus 264 e~------------------------------------------------hs~iVsTRHYRAPEViLgLGwS~pCDvWSi 295 (415)
T KOG0671|consen 264 EH------------------------------------------------HSTIVSTRHYRAPEVILGLGWSQPCDVWSI 295 (415)
T ss_pred cC------------------------------------------------cceeeeccccCCchheeccCcCCccCceee
Confidence 21 012577999999999999999999999999
Q ss_pred hchhhhccccC---CCCc--hHHHHHHHhhcCCCCccccccC--------------------------------------
Q 004989 298 GVLLFELFCPF---STGE--EKTRTMSSLRHRVLPPQLLLKF-------------------------------------- 334 (720)
Q Consensus 298 Gvll~eLltpf---~~~~--~~~~~~~~l~~~~~p~~~~~~~-------------------------------------- 334 (720)
||||+||.+|+ ...+ ++.++|..+.. .+|.......
T Consensus 296 GCIL~ElytG~~LFqtHen~EHLaMMerIlG-p~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~ 374 (415)
T KOG0671|consen 296 GCILVELYTGETLFQTHENLEHLAMMERILG-PIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQ 374 (415)
T ss_pred eeEEEEeeccceecccCCcHHHHHHHHHhhC-CCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhcc
Confidence 99999999954 3333 44456665554 2332211110
Q ss_pred -----chHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004989 335 -----PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 335 -----p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
....||+.+||.+||.+|+|+.|+|.||||+...
T Consensus 375 ~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~HpFF~~~~ 413 (415)
T KOG0671|consen 375 DDLEHVQLFDLLRRMLEFDPARRITLREALSHPFFARLT 413 (415)
T ss_pred CcHHHhHHHHHHHHHHccCccccccHHHHhcCHHhhcCC
Confidence 0123899999999999999999999999998763
No 300
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.95 E-value=4.1e-28 Score=255.97 Aligned_cols=208 Identities=17% Similarity=0.236 Sum_probs=161.5
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..|..++..++||||+++++ .+... ...|+++|| .|++|.+++......+++..+..++.||+.||.|||+.||+
T Consensus 63 ~~e~~~l~~l~~~~i~~~~~-~~~~~---~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~ 138 (286)
T cd06614 63 INEILIMKDCKHPNIVDYYD-SYLVG---DELWVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVI 138 (286)
T ss_pred HHHHHHHHHCCCCCeeEEEE-EEEEC---CEEEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 36777899999999999999 44444 267999999 88999999966544699999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
|+||+|+||+++.++.++|+|||.+....... .
T Consensus 139 H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~---------------------------------~-------------- 171 (286)
T cd06614 139 HRDIKSDNILLSKDGSVKLADFGFAAQLTKEK---------------------------------S-------------- 171 (286)
T ss_pred eCCCChhhEEEcCCCCEEECccchhhhhccch---------------------------------h--------------
Confidence 99999999999999999999988763211000 0
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......+++.|+|||.+.+..++.++|||||||++|+
T Consensus 172 -------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~ 208 (286)
T cd06614 172 -------------------------------------------KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIE 208 (286)
T ss_pred -------------------------------------------hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHH
Confidence 0001356889999999988889999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCCCccc-cccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 304 LFC---PFSTGEEKTRTMSSLRHRVLPPQL-LLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~~p~~~-~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|++ ||....... .+..+.....++.. ...++ ...+|+.+||+.+|.+||++.+++.|+||...
T Consensus 209 l~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~ 276 (286)
T cd06614 209 MAEGEPPYLREPPLR-ALFLITTKGIPPLKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQHPFLKKA 276 (286)
T ss_pred HHhCCCCCCCCCHHH-HHHHHHhcCCCCCcchhhCCHHHHHHHHHHhccChhhCcCHHHHhhChHhhcc
Confidence 999 555443332 22223222222211 11133 34599999999999999999999999999985
No 301
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=99.95 E-value=5.5e-28 Score=252.99 Aligned_cols=202 Identities=15% Similarity=0.147 Sum_probs=151.5
Q ss_pred hchhhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC---------------CCCCHHHHHH
Q 004989 63 RKHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---------------RSVDVYECLH 125 (720)
Q Consensus 63 r~~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~---------------~~l~~~~~~~ 125 (720)
+...|..++.++ +||||+++++ ++.... .+|++||| .+++|.+++.... ..+++..++.
T Consensus 41 ~~~~E~~~l~~l~~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 116 (270)
T cd05047 41 DFAGELEVLCKLGHHPNIINLLG-ACEHRG---YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLH 116 (270)
T ss_pred HHHHHHHHHHhhccCCCeeeEEE-EEecCC---CceEEEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHH
Confidence 334677788888 8999999999 444433 46999999 8999999995321 2478999999
Q ss_pred HHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcc
Q 004989 126 IFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRL 205 (720)
Q Consensus 126 i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 205 (720)
++.||+.||+|||+.|++||||||+||+++.++.++++|||++......
T Consensus 117 ~~~~i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~dfgl~~~~~~~------------------------------- 165 (270)
T cd05047 117 FAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVY------------------------------- 165 (270)
T ss_pred HHHHHHHHHHHHHHCCEeecccccceEEEcCCCeEEECCCCCccccchh-------------------------------
Confidence 9999999999999999999999999999999999999988876211000
Q ss_pred cccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC
Q 004989 206 RREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG 285 (720)
Q Consensus 206 ~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 285 (720)
. .......+..|+|||++.+
T Consensus 166 ------~------------------------------------------------------~~~~~~~~~~y~apE~~~~ 185 (270)
T cd05047 166 ------V------------------------------------------------------KKTMGRLPVRWMAIESLNY 185 (270)
T ss_pred ------h------------------------------------------------------hccCCCCccccCChHHHcc
Confidence 0 0000123567999999988
Q ss_pred CCCCccccchhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 286 APVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 286 ~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
..++.++|||||||++|||++ ||...... .....+.....++......+...+|+.+||..+|.+|||+.++++
T Consensus 186 ~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 263 (270)
T cd05047 186 SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA-ELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILV 263 (270)
T ss_pred CCCCchhhHHHHHHHHHHHHcCCCCCccccCHH-HHHHHHhCCCCCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHH
Confidence 889999999999999999996 66443322 333333333222222223345569999999999999999999986
No 302
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=99.95 E-value=4.4e-28 Score=252.62 Aligned_cols=204 Identities=17% Similarity=0.231 Sum_probs=156.3
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~---~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
+...|..++..++||||+++++. +..+. ..+++||| .|++|.+++.. ....+++..++.++.||+.||.|||
T Consensus 48 ~~~~e~~~l~~~~h~~i~~~~~~-~~~~~---~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH 123 (267)
T cd08229 48 DCIKEIDLLKQLNHPNVIKYYAS-FIEDN---ELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMH 123 (267)
T ss_pred HHHHHHHHHHHccCCchhhhhhe-eEeCC---eEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 33467889999999999999994 43332 57999999 88999999842 2345899999999999999999999
Q ss_pred HCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCC
Q 004989 139 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
++|++|+||||+||+++.++.++++|||.+........
T Consensus 124 ~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~------------------------------------------ 161 (267)
T cd08229 124 SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT------------------------------------------ 161 (267)
T ss_pred HCCeecCCCCHHHEEEcCCCCEEECcchhhhccccCCc------------------------------------------
Confidence 99999999999999999999999999887633211100
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhh
Q 004989 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
......|+..|+|||.+.+..++.++||||||
T Consensus 162 ------------------------------------------------~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG 193 (267)
T cd08229 162 ------------------------------------------------AAHSLVGTPYYMSPERIHENGYNFKSDIWSLG 193 (267)
T ss_pred ------------------------------------------------ccccccCCcCccCHHHhcCCCccchhhHHHHH
Confidence 00013578899999999888899999999999
Q ss_pred chhhhccc---cCCCCch-HHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 299 VLLFELFC---PFSTGEE-KTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 299 vll~eLlt---pf~~~~~-~~~~~~~l~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|++|+|++ ||..... .......+.....++...... +...+|+.+||+.+|.+|||+.+|++
T Consensus 194 ~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~ 260 (267)
T cd08229 194 CLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDITYVYD 260 (267)
T ss_pred HHHHHHHhCCCCcccccchHHHHhhhhhcCCCCCCCcccccHHHHHHHHHhcCCCcccCCCHHHHHH
Confidence 99999999 5543322 223333344333443333333 34559999999999999999998875
No 303
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=99.95 E-value=5.6e-28 Score=249.46 Aligned_cols=204 Identities=18% Similarity=0.210 Sum_probs=153.8
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
...|..++++++||||+++++ ++.... ..+++||| .|++|.+++.+....+++..++.++.|++.||.|||++|+
T Consensus 39 ~~~e~~~l~~l~~~~i~~~~~-~~~~~~---~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i 114 (251)
T cd05041 39 FLQEAEILKQYDHPNIVKLIG-VCVQKQ---PIYIVMELVPGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNC 114 (251)
T ss_pred HHHHHHHHHhCCCCCeEEEEE-EEecCC---CeEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence 346677899999999999999 554443 57999999 8999999996655568999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.++|+|||.+....... +.
T Consensus 115 ~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~----------------------------------~~----------- 149 (251)
T cd05041 115 IHRDLAARNCLVGENNVLKISDFGMSREEEGGI----------------------------------YT----------- 149 (251)
T ss_pred ehhhcCcceEEEcCCCcEEEeeccccccccCCc----------------------------------ce-----------
Confidence 999999999999999999999998874321100 00
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
.......++..|+|||.+.+..++.++|||||||++|
T Consensus 150 -------------------------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~ 186 (251)
T cd05041 150 -------------------------------------------VSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLW 186 (251)
T ss_pred -------------------------------------------eccccCcceeccCChHhhccCCCCcchhHHHHHHHHH
Confidence 0000012355699999998888999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 303 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
||++ ||...... .....+......+......+...+|+.+||..+|.+|||+.|+++
T Consensus 187 ~l~t~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~ 247 (251)
T cd05041 187 ETFSLGDTPYPGMSNQ-QTRERIESGYRMPAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYN 247 (251)
T ss_pred HHHhccCCCCccCCHH-HHHHHHhcCCCCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence 9997 45444332 223333322211111122234559999999999999999999986
No 304
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.95 E-value=3.9e-28 Score=255.06 Aligned_cols=206 Identities=19% Similarity=0.264 Sum_probs=160.1
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++.+++||||+++++ .+..+. .+|+|||| .+++|.+++... .+++..+..++.||+.||.|||+.|+
T Consensus 49 ~~~e~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~l~~~i~~~--~~~~~~~~~~~~~l~~~l~~lh~~~i 122 (277)
T cd06641 49 IQQEITVLSQCDSPYVTKYYG-SYLKDT---KLWIIMEYLGGGSALDLLEPG--PLDETQIATILREILKGLDYLHSEKK 122 (277)
T ss_pred HHHHHHHHHhcCCCCEeEEEE-EEEeCC---eEEEEEEeCCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHccCCe
Confidence 336777899999999999999 454443 57999999 889999998543 48999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+|+||||+||+++.++.++++|||.+...... ++
T Consensus 123 ~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~----------------------------------~~------------ 156 (277)
T cd06641 123 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDT----------------------------------QI------------ 156 (277)
T ss_pred ecCCCCHHhEEECCCCCEEEeecccceecccc----------------------------------hh------------
Confidence 99999999999999999999999876321100 00
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......|+.+|+|||.+.+..++.++|+|||||++|
T Consensus 157 --------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~ 192 (277)
T cd06641 157 --------------------------------------------KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAI 192 (277)
T ss_pred --------------------------------------------hhccccCCccccChhhhccCCCCchhhHHHHHHHHH
Confidence 000135788999999998888899999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 303 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
+|++ ||...... .....+... .++.+....+ ...+++.+||+.+|.+||++.++++||||...
T Consensus 193 ~l~~g~~p~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~~~~ 259 (277)
T cd06641 193 ELAKGEPPHSELHPM-KVLFLIPKN-NPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFIVRF 259 (277)
T ss_pred HHHcCCCCCCccchH-HHHHHHhcC-CCCCCCcccCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhhh
Confidence 9999 44433322 222223222 2233333333 45599999999999999999999999999875
No 305
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=99.95 E-value=6.1e-28 Score=251.04 Aligned_cols=201 Identities=15% Similarity=0.145 Sum_probs=154.3
Q ss_pred hhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
+|..++.+++||||+++++ ++.... .+|++||| .+++|.+++... +..+++..+..++.||+.||.|||+.||+
T Consensus 50 ~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~ 125 (261)
T cd05068 50 AEAQIMKKLRHPKLIQLYA-VCTLEE---PIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYI 125 (261)
T ss_pred HHHHHHHHCCCCCccceeE-EEecCC---CeeeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 5777999999999999999 554443 57999999 799999999543 34689999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+||+++.++.++|+|||.+...+..... ..
T Consensus 126 H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~------------------------------~~-------------- 161 (261)
T cd05068 126 HRDLAARNVLVGENNICKVADFGLARVIKEDIYE------------------------------AR-------------- 161 (261)
T ss_pred eccCCcceEEEcCCCCEEECCcceEEEccCCccc------------------------------cc--------------
Confidence 9999999999999999999999887443211000 00
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
.+ ...+..|+|||.+.+..++.++|||||||++||
T Consensus 162 --------------------------~~-------------------~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~e 196 (261)
T cd05068 162 --------------------------EG-------------------AKFPIKWTAPEAALYNRFSIKSDVWSFGILLTE 196 (261)
T ss_pred --------------------------CC-------------------CcCceeccCccccccCCCCchhhHHHHHHHHHH
Confidence 00 122457999999988889999999999999999
Q ss_pred ccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 304 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 304 Llt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|++ ||.+.... .....+......+..........+++.+||+.+|.+||++.++++
T Consensus 197 l~t~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~ 256 (261)
T cd05068 197 IVTYGRMPYPGMTNA-EVLQQVDQGYRMPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQW 256 (261)
T ss_pred HHhcCCCCCCCCCHH-HHHHHHHcCCCCCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence 998 56554433 333444333222222223345569999999999999999999875
No 306
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=99.95 E-value=6.9e-28 Score=253.85 Aligned_cols=208 Identities=15% Similarity=0.192 Sum_probs=153.1
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++++++||||+++++ ++..+. ..+++||| .++.|..++. ....+++.+++.++.||+.||.|||++|
T Consensus 46 ~~~~e~~~l~~l~~~~i~~~~~-~~~~~~---~~~iv~e~~~~~~l~~~~~-~~~~~~~~~~~~~~~~i~~~l~~LH~~~ 120 (288)
T cd07833 46 TALREVKVLRQLRHENIVNLKE-AFRRKG---RLYLVFEYVERTLLELLEA-SPGGLPPDAVRSYIWQLLQAIAYCHSHN 120 (288)
T ss_pred HHHHHHHHHHhcCCCCeeehhh-eEEECC---EEEEEEecCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3346777999999999999999 444432 57999999 5544444443 3345999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+|+||+|+||+++.++.++|+|||.+........
T Consensus 121 i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~--------------------------------------------- 155 (288)
T cd07833 121 IIHRDIKPENILVSESGVLKLCDFGFARALRARPA--------------------------------------------- 155 (288)
T ss_pred eecCCCCHHHeEECCCCCEEEEeeecccccCCCcc---------------------------------------------
Confidence 99999999999999999999999988743211100
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC-CCCccccchhhhch
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVL 300 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGvl 300 (720)
.......++.+|+|||++.+. .++.++|||||||+
T Consensus 156 --------------------------------------------~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~ 191 (288)
T cd07833 156 --------------------------------------------SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCI 191 (288)
T ss_pred --------------------------------------------ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHH
Confidence 000113578899999999888 68999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhh--cC------------------CCCc---------ccccc-CchHHHHHHHcCCC
Q 004989 301 LFELFC---PFSTGEEKTRTMSSLR--HR------------------VLPP---------QLLLK-FPKEASFCLWLLHP 347 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~--~~------------------~~p~---------~~~~~-~p~~~~Li~~~L~~ 347 (720)
+|+|++ ||.............. .. .+++ .+... .++..+|+.+||..
T Consensus 192 l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~ 271 (288)
T cd07833 192 MAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRM 271 (288)
T ss_pred HHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhcc
Confidence 999999 4544333221111100 00 0000 01111 23455999999999
Q ss_pred CCCCCCChHHHHcCccc
Q 004989 348 EPSGRPKMGELLQSEFL 364 (720)
Q Consensus 348 dP~~Rpta~eiL~hp~~ 364 (720)
+|++||++.+++.||||
T Consensus 272 ~p~~Rps~~~il~~~~f 288 (288)
T cd07833 272 DPKERLTCDELLQHPYF 288 (288)
T ss_pred CchhcccHHHHhcCCCC
Confidence 99999999999999997
No 307
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=99.95 E-value=2.8e-28 Score=256.73 Aligned_cols=205 Identities=20% Similarity=0.267 Sum_probs=151.8
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..++..++||||+++++ ++..+. .+|++||| .+++|.+++... ..+++..++.++.||+.||.|||+.||+
T Consensus 48 ~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~i~ 122 (286)
T cd07846 48 MREIRMLKQLRHENLVNLIE-VFRRKK---RLYLVFEFVDHTVLDDLEKYP-NGLDESRVRKYLFQILRGIEFCHSHNII 122 (286)
T ss_pred HHHHHHHHhcCCcchhhHHH-hcccCC---eEEEEEecCCccHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 36777899999999999999 444433 67999999 777888776443 3489999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
|+||+|+||++++++.++|+|||++....... .
T Consensus 123 h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~--------------------------------~--------------- 155 (286)
T cd07846 123 HRDIKPENILVSQSGVVKLCDFGFARTLAAPG--------------------------------E--------------- 155 (286)
T ss_pred ccCCCHHHEEECCCCcEEEEeeeeeeeccCCc--------------------------------c---------------
Confidence 99999999999999999999998873221100 0
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC-CCccccchhhhchhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLF 302 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGvll~ 302 (720)
......++.+|+|||.+.+.. ++.++|||||||++|
T Consensus 156 -------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~ 192 (286)
T cd07846 156 -------------------------------------------VYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVT 192 (286)
T ss_pred -------------------------------------------ccCcccceeeccCcHHhccccccCchHhHHHHHHHHH
Confidence 000135788999999987644 788999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhh--c------------------CCCCc---------cccccCchHHHHHHHcCCCCCC
Q 004989 303 ELFC---PFSTGEEKTRTMSSLR--H------------------RVLPP---------QLLLKFPKEASFCLWLLHPEPS 350 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~--~------------------~~~p~---------~~~~~~p~~~~Li~~~L~~dP~ 350 (720)
||++ ||.............. . ...+. ......+...+|+.+||+++|.
T Consensus 193 el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~ 272 (286)
T cd07846 193 EMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPD 272 (286)
T ss_pred HHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcc
Confidence 9999 4443322111111000 0 00000 0111223455999999999999
Q ss_pred CCCChHHHHcCccc
Q 004989 351 GRPKMGELLQSEFL 364 (720)
Q Consensus 351 ~Rpta~eiL~hp~~ 364 (720)
+||++.++++||||
T Consensus 273 ~Rp~~~~il~~~~~ 286 (286)
T cd07846 273 DRPSSSQLLHHEFF 286 (286)
T ss_pred cchhHHHHhcCCCC
Confidence 99999999999997
No 308
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=99.95 E-value=7.2e-28 Score=255.13 Aligned_cols=203 Identities=16% Similarity=0.159 Sum_probs=152.1
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC----------CCCCHHHHHHHHHHHHHH
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK----------RSVDVYECLHIFRQIVEI 133 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~----------~~l~~~~~~~i~~QIl~a 133 (720)
.+|..++.+++||||+++++ ++..+. .++++||| .+++|.++|.... ..+++..++.++.||+.|
T Consensus 67 ~~e~~~l~~l~~~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a 142 (296)
T cd05051 67 LKEVKILSRLSDPNIARLLG-VCTVDP---PLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASG 142 (296)
T ss_pred HHHHHHHHhcCCCCEeEEEE-EEecCC---CcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHH
Confidence 36778999999999999999 554442 57999999 8899999995433 258999999999999999
Q ss_pred HHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccc
Q 004989 134 VYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLV 213 (720)
Q Consensus 134 L~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla 213 (720)
|.|||+.||+||||||+||+++.++.++|+|||.+....... .+.
T Consensus 143 l~~LH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~---------------------------------~~~-- 187 (296)
T cd05051 143 MRYLESLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSSD---------------------------------YYR-- 187 (296)
T ss_pred HHHHHHcCccccccchhceeecCCCceEEccccceeecccCc---------------------------------cee--
Confidence 999999999999999999999999999999998874321110 000
Q ss_pred cCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCcccc
Q 004989 214 TAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASD 293 (720)
Q Consensus 214 ~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sD 293 (720)
......+++.|+|||.+.+..++.++|
T Consensus 188 -----------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~D 214 (296)
T cd05051 188 -----------------------------------------------------VQGRAPLPIRWMAWESVLLGKFTTKSD 214 (296)
T ss_pred -----------------------------------------------------ecCcCCCCceecCHHHhhcCCCCccch
Confidence 000134578899999998888999999
Q ss_pred chhhhchhhhccc-----cCCCCchHHHHHHHhhcC-------CCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 294 IYRLGVLLFELFC-----PFSTGEEKTRTMSSLRHR-------VLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 294 IwSLGvll~eLlt-----pf~~~~~~~~~~~~l~~~-------~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
||||||++|||++ ||...... ..+..+... ...+......+...+|+.+||..||.+|||+.|+++
T Consensus 215 v~slG~~l~el~~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~ 292 (296)
T cd05051 215 VWAFGVTLWEILTLCREQPYEHLTDQ-QVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHL 292 (296)
T ss_pred hhhhHHHHHHHHhcCCCCCCCCcChH-HHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHH
Confidence 9999999999987 44433222 222222211 111111112244569999999999999999999975
No 309
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.95 E-value=5.6e-28 Score=257.51 Aligned_cols=205 Identities=16% Similarity=0.172 Sum_probs=155.3
Q ss_pred hchhhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC---------------CCCCCHHHHHH
Q 004989 63 RKHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---------------KRSVDVYECLH 125 (720)
Q Consensus 63 r~~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~---------------~~~l~~~~~~~ 125 (720)
+..+|..++..+ +||||+++++ ++.... .+|++||| .+++|.++|.+. ...++...++.
T Consensus 66 ~~~~E~~~l~~l~~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (304)
T cd05101 66 DLVSEMEMMKMIGKHKNIINLLG-ACTQDG---PLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVS 141 (304)
T ss_pred HHHHHHHHHHhhccCCCchheeE-EEecCC---ceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHH
Confidence 445777888888 8999999999 554443 57999999 889999999542 12478889999
Q ss_pred HHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcc
Q 004989 126 IFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRL 205 (720)
Q Consensus 126 i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 205 (720)
++.||+.||.|||++||+||||||+||+++.++.++|+|||.++.......
T Consensus 142 ~~~qi~~al~~LH~~givH~dlkp~Nili~~~~~~kl~D~g~~~~~~~~~~----------------------------- 192 (304)
T cd05101 142 CTYQVARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDVNNIDY----------------------------- 192 (304)
T ss_pred HHHHHHHHHHHHHHCCeeecccccceEEEcCCCcEEECCCccceecccccc-----------------------------
Confidence 999999999999999999999999999999999999999988743321100
Q ss_pred cccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC
Q 004989 206 RREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG 285 (720)
Q Consensus 206 ~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 285 (720)
.. ......+++.|+|||++.+
T Consensus 193 ----~~-------------------------------------------------------~~~~~~~~~~y~aPE~~~~ 213 (304)
T cd05101 193 ----YK-------------------------------------------------------KTTNGRLPVKWMAPEALFD 213 (304)
T ss_pred ----cc-------------------------------------------------------cccCCCCCceeeCchhhcc
Confidence 00 0000235678999999988
Q ss_pred CCCCccccchhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 286 APVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 286 ~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
..++.++|||||||++|+|++ ||... ........+.....+...........+|+.+||+++|.+||++.|+++
T Consensus 214 ~~~~~~~Di~slG~~l~el~~~g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~ 291 (304)
T cd05101 214 RVYTHQSDVWSFGVLMWEIFTLGGSPYPGI-PVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVE 291 (304)
T ss_pred CCCCchhhHHHHHHHHHHHHcCCCCCcccC-CHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHH
Confidence 889999999999999999997 44433 233444444443322222223344559999999999999999999986
No 310
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=99.95 E-value=4e-28 Score=268.73 Aligned_cols=204 Identities=17% Similarity=0.184 Sum_probs=154.7
Q ss_pred chhhhhhcccCC-CCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC---------------------------
Q 004989 64 KHSDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP--------------------------- 114 (720)
Q Consensus 64 ~~~e~~~L~~l~-HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~--------------------------- 114 (720)
..+|..+|+++. |||||++++ ++.... .+|+|||| .+++|.++|.+.
T Consensus 87 ~~~Ei~~l~~l~~HpnIv~l~~-~~~~~~---~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (400)
T cd05105 87 LMSELKIMTHLGPHLNIVNLLG-ACTKSG---PIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADES 162 (400)
T ss_pred HHHHHHHHHhcCCCCCeeeEEE-EEccCC---ceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCccccc
Confidence 346788999996 999999999 554433 57999999 999999998431
Q ss_pred --------------------------------------------------------------------CCCCCHHHHHHH
Q 004989 115 --------------------------------------------------------------------KRSVDVYECLHI 126 (720)
Q Consensus 115 --------------------------------------------------------------------~~~l~~~~~~~i 126 (720)
...+++.++..+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~ 242 (400)
T cd05105 163 TRSYVILSFENKGDYMDMKQADTTQYVPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSF 242 (400)
T ss_pred ccchhhhhhcccccccccccccccccchhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHH
Confidence 123778889999
Q ss_pred HHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhccc
Q 004989 127 FRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLR 206 (720)
Q Consensus 127 ~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 206 (720)
+.||+.||.|||+.||+||||||+|||++.++.+||+|||++........
T Consensus 243 ~~qi~~aL~~LH~~~ivH~dikp~Nill~~~~~~kL~DfGla~~~~~~~~------------------------------ 292 (400)
T cd05105 243 TYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSN------------------------------ 292 (400)
T ss_pred HHHHHHHHHHHHhCCeeCCCCChHhEEEeCCCEEEEEeCCcceecccccc------------------------------
Confidence 99999999999999999999999999999999999999998743211100
Q ss_pred ccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC
Q 004989 207 REDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA 286 (720)
Q Consensus 207 l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 286 (720)
. .......+++.|+|||.+.+.
T Consensus 293 ---~-------------------------------------------------------~~~~~~~~~~~y~aPE~~~~~ 314 (400)
T cd05105 293 ---Y-------------------------------------------------------VSKGSTFLPVKWMAPESIFDN 314 (400)
T ss_pred ---c-------------------------------------------------------cccCCcCCCcceEChhhhcCC
Confidence 0 000012467889999999888
Q ss_pred CCCccccchhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 287 PVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 287 ~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
.++.++|||||||++|||++ ||............+.....++ ....++ ...+|+.+||..||++||++.++.+
T Consensus 315 ~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 392 (400)
T cd05105 315 LYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFYNKIKSGYRMA-KPDHATQEVYDIMVKCWNSEPEKRPSFLHLSD 392 (400)
T ss_pred CCCchhhHHHHHHHHHHHHHCCCCCCcccchhHHHHHHHhcCCCCC-CCccCCHHHHHHHHHHCccCHhHCcCHHHHHH
Confidence 89999999999999999986 5554433333344444443332 223334 4569999999999999999998875
No 311
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=99.95 E-value=5.6e-28 Score=252.60 Aligned_cols=203 Identities=19% Similarity=0.170 Sum_probs=156.1
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+...|..++.+++||||+++++ ++.+. ..|++||| .+++|.+++.+....+++..++.++.||+.||+|||+.|
T Consensus 53 ~~~~e~~~l~~~~h~~i~~~~~-~~~~~----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~ 127 (270)
T cd05056 53 KFLQEAYIMRQFDHPHIVKLIG-VITEN----PVWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKR 127 (270)
T ss_pred HHHHHHHHHHhCCCCchhceeE-EEcCC----CcEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3446788999999999999999 55443 46899999 899999999665556899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
++|+||||+||+++.++.++++|||.+....... +
T Consensus 128 ~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~----------------------------------~----------- 162 (270)
T cd05056 128 FVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDES----------------------------------Y----------- 162 (270)
T ss_pred eeccccChheEEEecCCCeEEccCceeeeccccc----------------------------------c-----------
Confidence 9999999999999999999999988773221000 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
. ......++..|+|||.+....++.++|||||||++
T Consensus 163 -------------------------~-------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 198 (270)
T cd05056 163 -------------------------Y-------------------KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCM 198 (270)
T ss_pred -------------------------e-------------------ecCCCCccccccChhhhccCCCCchhhhHHHHHHH
Confidence 0 00001235679999999888899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||...... .....+.....++......+...+|+.+||.++|.+|||+.+++.
T Consensus 199 ~el~~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~ 260 (270)
T cd05056 199 WEILMLGVKPFQGVKNN-DVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKA 260 (270)
T ss_pred HHHHHcCCCCCCCCCHH-HHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 99886 66655443 233344443333322223345569999999999999999999885
No 312
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=99.95 E-value=7.1e-28 Score=252.48 Aligned_cols=202 Identities=13% Similarity=0.110 Sum_probs=153.8
Q ss_pred hhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC---------CCCCCHHHHHHHHHHHHHHHH
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---------KRSVDVYECLHIFRQIVEIVY 135 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~---------~~~l~~~~~~~i~~QIl~aL~ 135 (720)
+|..+|..++||||+++++ ++... ...|++||| .+++|.+++... ...+++..++.++.||+.||.
T Consensus 58 ~e~~~l~~~~~~~i~~~~~-~~~~~---~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~ 133 (277)
T cd05032 58 NEASVMKEFNCHHVVRLLG-VVSTG---QPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMA 133 (277)
T ss_pred HHHHHHHhCCCCceeEEEE-EEcCC---CCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHH
Confidence 6777899999999999999 44444 357999999 889999999432 123688899999999999999
Q ss_pred HHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccC
Q 004989 136 AAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 215 (720)
Q Consensus 136 yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~ 215 (720)
|||+.||+||||||+||+++.++.++|+|||.++..... ++ .
T Consensus 134 ~lH~~~i~H~di~p~nill~~~~~~kl~dfg~~~~~~~~----------------------------------~~--~-- 175 (277)
T cd05032 134 YLAAKKFVHRDLAARNCMVAEDLTVKIGDFGMTRDIYET----------------------------------DY--Y-- 175 (277)
T ss_pred HHHhCCccccccChheEEEcCCCCEEECCcccchhhccC----------------------------------cc--c--
Confidence 999999999999999999999999999998887432111 00 0
Q ss_pred CCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccch
Q 004989 216 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIY 295 (720)
Q Consensus 216 ~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIw 295 (720)
.......++..|+|||.+.+..++.++|||
T Consensus 176 --------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~ 205 (277)
T cd05032 176 --------------------------------------------------RKGGKGLLPVRWMAPESLKDGVFTTKSDVW 205 (277)
T ss_pred --------------------------------------------------ccCCCCCccccccCHHHHhcCCCCcccchH
Confidence 000012457789999999888899999999
Q ss_pred hhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 296 RLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 296 SLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
||||++|||++ ||..... ......+.....++......+...+|+.+||.++|++|||+.++++
T Consensus 206 slG~il~el~t~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 273 (277)
T cd05032 206 SFGVVLWEMATLAEQPYQGLSN-EEVLKFVIDGGHLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVS 273 (277)
T ss_pred HHHHHHHHhhccCCCCCccCCH-HHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 99999999997 5554333 2344444433332222222344459999999999999999999986
No 313
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=99.95 E-value=8.1e-28 Score=249.09 Aligned_cols=197 Identities=17% Similarity=0.136 Sum_probs=150.7
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
.+|..++.+++||||+++++ ++... ..+++||| .+++|.+++... ...+++..++.++.||+.||.|||+.|+
T Consensus 47 ~~e~~~l~~~~~~~i~~~~~-~~~~~----~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~ 121 (254)
T cd05083 47 LEETAVMTKLHHKNLVRLLG-VILHN----GLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKL 121 (254)
T ss_pred HHHHHHHHhCCCCCcCeEEE-EEcCC----CcEEEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 36777899999999999999 44332 25899999 889999999543 3358999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.++|+|||.+...... .
T Consensus 122 ~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~-------------------------------------~---------- 154 (254)
T cd05083 122 VHRDLAARNILVSEDGVAKVSDFGLARVGSMG-------------------------------------V---------- 154 (254)
T ss_pred eccccCcceEEEcCCCcEEECCCccceecccc-------------------------------------C----------
Confidence 99999999999999999999998876321000 0
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
.....+..|+|||.+.+..++.++|||||||++|
T Consensus 155 ----------------------------------------------~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ 188 (254)
T cd05083 155 ----------------------------------------------DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLW 188 (254)
T ss_pred ----------------------------------------------CCCCCCceecCHHHhccCCcCchhhHHHHHHHHH
Confidence 0012245799999998888999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 303 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
||++ ||...... .....+..+..++......+...+|+.+||..+|..||++.+++.
T Consensus 189 el~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 249 (254)
T cd05083 189 EVFSYGRAPYPKMSLK-EVKECVEKGYRMEPPEGCPADVYVLMTSCWETEPKKRPSFHKLRE 249 (254)
T ss_pred HHHhCCCCCCccCCHH-HHHHHHhCCCCCCCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 9986 55544332 233333333222222222344559999999999999999999975
No 314
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=99.95 E-value=6.5e-28 Score=250.68 Aligned_cols=202 Identities=13% Similarity=0.118 Sum_probs=153.5
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
..+|..++.+++||||+++++ ++... ..|++||| .+++|.+++.. ....+++..++.++.||+.||.|||+.|
T Consensus 48 ~~~E~~~l~~l~~~~i~~~~~-~~~~~----~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~ 122 (260)
T cd05070 48 FLEEAQIMKKLRHDKLVQLYA-VVSEE----PIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMN 122 (260)
T ss_pred HHHHHHHHHhcCCCceEEEEe-EECCC----CcEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 346777999999999999998 44332 36899999 88999999954 3345899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.++|+|||.+.........
T Consensus 123 i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~-------------------------------------------- 158 (260)
T cd05070 123 YIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYT-------------------------------------------- 158 (260)
T ss_pred cccCCCccceEEEeCCceEEeCCceeeeeccCcccc--------------------------------------------
Confidence 999999999999999999999988887332111000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......++..|+|||.+.+..++.++|||||||++
T Consensus 159 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l 193 (260)
T cd05070 159 ---------------------------------------------ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILL 193 (260)
T ss_pred ---------------------------------------------cccCCCCCccccChHHHhcCCCcchhhhHHHHHHH
Confidence 00002346679999999888899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||..... ......+.....++..........+|+.+||.++|++|||+++++.
T Consensus 194 ~~l~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 255 (260)
T cd05070 194 TELVTKGRVPYPGMNN-REVLEQVERGYRMPCPQDCPISLHELMLQCWKKDPEERPTFEYLQS 255 (260)
T ss_pred HHHHhcCCCCCCCCCH-HHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 99997 4544333 2344444443333322223344559999999999999999999864
No 315
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=99.95 E-value=7.4e-28 Score=251.28 Aligned_cols=205 Identities=13% Similarity=0.153 Sum_probs=157.0
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
...|..++.+++||||+++++ ++.... ..|++||| .+++|.+++......+++..+..++.|++.||+|||+.|+
T Consensus 53 ~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i 128 (268)
T cd05063 53 FLSEASIMGQFSHHNIIRLEG-VVTKFK---PAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNY 128 (268)
T ss_pred HHHHHHHHhcCCCCCeeEEEE-EEccCC---CcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 346777899999999999999 554443 57999999 8899999996655668999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.++++|||++........ ..+
T Consensus 129 ~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~-------------------------------~~~------------ 165 (268)
T cd05063 129 VHRDLAARNILVNSNLECKVSDFGLSRVLEDDPE-------------------------------GTY------------ 165 (268)
T ss_pred eccccchhhEEEcCCCcEEECCCccceecccccc-------------------------------cce------------
Confidence 9999999999999999999999988743211000 000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
.......++.|+|||++.+..++.++|||||||++|
T Consensus 166 --------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ 201 (268)
T cd05063 166 --------------------------------------------TTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMW 201 (268)
T ss_pred --------------------------------------------eccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHH
Confidence 000012356799999998888999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 303 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
||++ ||..... ......+......+......+...+|+.+||..+|.+||++.++++
T Consensus 202 ell~~g~~p~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~ 262 (268)
T cd05063 202 EVMSFGERPYWDMSN-HEVMKAINDGFRLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVN 262 (268)
T ss_pred HHHhCCCCCCCcCCH-HHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 9886 5544333 2344444444333333333445569999999999999999999985
No 316
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.95 E-value=5.3e-28 Score=261.75 Aligned_cols=217 Identities=18% Similarity=0.197 Sum_probs=158.0
Q ss_pred chhhhhhcccC-CCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..+++++ +||||+++++ ++... ....+|+||||.+++|.+++... .+++..++.++.||+.||.|||+.||
T Consensus 53 ~~~E~~~l~~l~~h~ni~~~~~-~~~~~-~~~~~~lv~e~~~~~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH~~~i 128 (337)
T cd07852 53 TFREIMFLQELGDHPNIVKLLN-VIKAE-NDKDIYLVFEYMETDLHAVIRAN--ILEDVHKRYIMYQLLKALKYIHSGNV 128 (337)
T ss_pred hhHHHHHHHHhcCCCCccceee-eeccC-CCceEEEEecccccCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 33678899999 9999999999 44332 22357999999667999998554 58999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.++|+|||.+......... .
T Consensus 129 ~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~~~--------------------------------~------------ 164 (337)
T cd07852 129 IHRDLKPSNILLNSDCRVKLADFGLARSLSELEEN--------------------------------P------------ 164 (337)
T ss_pred ecCCCCHHHEEEcCCCcEEEeeccchhcccccccc--------------------------------c------------
Confidence 99999999999999999999999987432111000 0
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC-CCCccccchhhhchh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLL 301 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGvll 301 (720)
..+ ......||++|+|||.+.+. .++.++|||||||++
T Consensus 165 ----------------------------------------~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l 203 (337)
T cd07852 165 ----------------------------------------ENP-VLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCIL 203 (337)
T ss_pred ----------------------------------------cCc-chhcccccccccCceeeeccccccccchHHHHHHHH
Confidence 000 00114679999999988654 478999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHh--------------------------hcCC--CCccccc-cCchHHHHHHHcCCCCC
Q 004989 302 FELFC---PFSTGEEKTRTMSSL--------------------------RHRV--LPPQLLL-KFPKEASFCLWLLHPEP 349 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l--------------------------~~~~--~p~~~~~-~~p~~~~Li~~~L~~dP 349 (720)
|+|++ ||............. .... ....... ..+...+||.+||+.+|
T Consensus 204 ~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P 283 (337)
T cd07852 204 GEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNP 283 (337)
T ss_pred HHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCc
Confidence 99999 554432221111000 0000 0011111 23344599999999999
Q ss_pred CCCCChHHHHcCcccCCCcc
Q 004989 350 SGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 350 ~~Rpta~eiL~hp~~~~~~~ 369 (720)
++|||+.++++||||.....
T Consensus 284 ~~Rps~~~il~~~~~~~~~~ 303 (337)
T cd07852 284 NKRLTAEEALEHPYVAQFHN 303 (337)
T ss_pred ccccCHHHHhhChhhhhhcc
Confidence 99999999999999988644
No 317
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.95 E-value=7e-28 Score=255.80 Aligned_cols=209 Identities=17% Similarity=0.187 Sum_probs=154.3
Q ss_pred hhhhhccc-CCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCce
Q 004989 66 SDGVELTH-GDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-QGIV 143 (720)
Q Consensus 66 ~e~~~L~~-l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs-~gIv 143 (720)
+|..++.. .+||||+++++ .+.++. .+|++|||.+++|..++......+++..+..++.||+.||.|||+ .||+
T Consensus 62 ~e~~~~~~~~~~~~i~~~~~-~~~~~~---~~~~v~e~~~~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~ 137 (296)
T cd06618 62 MDLDVVLKSHDCPYIVKCYG-YFITDS---DVFICMELMSTCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVI 137 (296)
T ss_pred HHHHHHHhccCCCchHhhhe-eeecCC---eEEEEeeccCcCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEe
Confidence 34434444 45999999999 444443 579999997778888875544569999999999999999999997 6999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||+|+||+++.++.++|+|||.+.......
T Consensus 138 H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~------------------------------------------------ 169 (296)
T cd06618 138 HRDVKPSNILLDASGNVKLCDFGISGRLVDSK------------------------------------------------ 169 (296)
T ss_pred cCCCcHHHEEEcCCCCEEECccccchhccCCC------------------------------------------------
Confidence 99999999999999999999988763221100
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC----CCccccchhhhc
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP----VSCASDIYRLGV 299 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~----~s~~sDIwSLGv 299 (720)
......+++.|+|||.+.+.. ++.++|||||||
T Consensus 170 -------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~ 206 (296)
T cd06618 170 -------------------------------------------AKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGI 206 (296)
T ss_pred -------------------------------------------cccCCCCCccccCHhhcCCCCCccccccchhHHHHHH
Confidence 000124678899999997653 789999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcCCCCccc--cccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004989 300 LLFELFC---PFSTGEEKTRTMSSLRHRVLPPQL--LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~--~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
++|+|++ ||............+.....+... ........+|+.+||+.||.+||++.++++||||.....
T Consensus 207 il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~ 281 (296)
T cd06618 207 SLVELATGQFPYKNCKTEFEVLTKILQEEPPSLPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPFIRRYET 281 (296)
T ss_pred HHHHHHhCCCCCCcchhHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcChhhhccch
Confidence 9999999 554433322333333222221111 112334569999999999999999999999999987633
No 318
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=1.4e-29 Score=268.05 Aligned_cols=224 Identities=16% Similarity=0.201 Sum_probs=182.4
Q ss_pred hhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCcee
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|..||...+.|.||++|. .|.+.. ++|+.||- .||.|...|+..+. +++..++.|+..+++|++|||++|||.
T Consensus 469 sEr~Im~~~~s~fIvrLYr-Tfrd~k---yvYmLmEaClGGElWTiLrdRg~-Fdd~tarF~~acv~EAfeYLH~k~iIY 543 (732)
T KOG0614|consen 469 SERNIMMECRSDFIVRLYR-TFRDSK---YVYMLMEACLGGELWTILRDRGS-FDDYTARFYVACVLEAFEYLHRKGIIY 543 (732)
T ss_pred hHHHHHHhcCchHHHHHHH-Hhccch---hhhhhHHhhcCchhhhhhhhcCC-cccchhhhhHHHHHHHHHHHHhcCcee
Confidence 4555788888999999999 454443 67999999 99999999966655 999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccc
Q 004989 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+|.+++.+|.+||+|||+|+..|...
T Consensus 544 RDLKPENllLd~~Gy~KLVDFGFAKki~~g~------------------------------------------------- 574 (732)
T KOG0614|consen 544 RDLKPENLLLDNRGYLKLVDFGFAKKIGSGR------------------------------------------------- 574 (732)
T ss_pred ccCChhheeeccCCceEEeehhhHHHhccCC-------------------------------------------------
Confidence 9999999999999999999999885543321
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhc
Q 004989 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 304 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eL 304 (720)
+.-..+|||.|.|||++.+...+.++|.||||+++|||
T Consensus 575 ------------------------------------------KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~EL 612 (732)
T KOG0614|consen 575 ------------------------------------------KTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYEL 612 (732)
T ss_pred ------------------------------------------ceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHH
Confidence 01126899999999999999999999999999999999
Q ss_pred cc---cCCCCchHHHHHHHhhcCCCCccccccCchHH-HHHHHcCCCCCCCCC-----ChHHHHcCcccCCC-ccchHHH
Q 004989 305 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEA-SFCLWLLHPEPSGRP-----KMGELLQSEFLNEP-RDSMEER 374 (720)
Q Consensus 305 lt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~-~Li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~-~~~l~e~ 374 (720)
|+ ||.+.++. .++..|.+++-.-.++...++.+ +||+++...+|.+|. .+.+|-.|-||... +..+..+
T Consensus 613 L~G~pPFs~~dpm-ktYn~ILkGid~i~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~gfdweglr~~ 691 (732)
T KOG0614|consen 613 LTGSPPFSGVDPM-KTYNLILKGIDKIEFPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRWFEGFDWEGLRSR 691 (732)
T ss_pred HcCCCCCCCCchH-HHHHHHHhhhhhhhcccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhhhhcCChhhhhhc
Confidence 99 77766554 56666666665555555666665 999999999999997 48999999999987 4455555
Q ss_pred HHHHHHhhhhhh
Q 004989 375 EAAIELREQIDE 386 (720)
Q Consensus 375 ~~~~~~~e~~~~ 386 (720)
...+++.....+
T Consensus 692 ~L~pPi~~~va~ 703 (732)
T KOG0614|consen 692 TLPPPIIPSVAN 703 (732)
T ss_pred cCCCCccccCCC
Confidence 555555554444
No 319
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.95 E-value=6.8e-28 Score=249.00 Aligned_cols=205 Identities=20% Similarity=0.253 Sum_probs=161.9
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~---~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
+...|..++++++||||+++++.++. . ...|++||| .+++|.+++.+ ....+++..++.++.||+.||.|||
T Consensus 45 ~~~~e~~~l~~l~~~~i~~~~~~~~~-~---~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh 120 (256)
T cd08530 45 DAVNEIRILASVNHPNIISYKEAFLD-G---NKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALH 120 (256)
T ss_pred HHHHHHHHHHhCCCCCchhhhhhhcc-C---CEEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHh
Confidence 44477889999999999999994443 3 368999999 89999999844 2345899999999999999999999
Q ss_pred HCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCC
Q 004989 139 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
+.|++|+||+|+||+++.++.++|+|||.+...... +
T Consensus 121 ~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~-----------------------------------~-------- 157 (256)
T cd08530 121 EQKILHRDLKSANILLVANDLVKIGDLGISKVLKKN-----------------------------------M-------- 157 (256)
T ss_pred hCCcccCCCCcceEEEecCCcEEEeeccchhhhccC-----------------------------------C--------
Confidence 999999999999999999999999998877322110 0
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhh
Q 004989 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
.....|++.|+|||.+.+..++.++|+||||
T Consensus 158 -------------------------------------------------~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG 188 (256)
T cd08530 158 -------------------------------------------------AKTQIGTPHYMAPEVWKGRPYSYKSDIWSLG 188 (256)
T ss_pred -------------------------------------------------cccccCCccccCHHHHCCCCCCchhhHHHHH
Confidence 0002468899999999888899999999999
Q ss_pred chhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004989 299 VLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
+++|+|++ ||...... .....+.....++..........+++.+||+.+|.+||++.++++||++
T Consensus 189 ~~~~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~p~~ 256 (256)
T cd08530 189 CLLYEMATFAPPFEARSMQ-DLRYKVQRGKYPPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILASPAV 256 (256)
T ss_pred HHHHHHHhCCCCCCCCCHH-HHHHHHhcCCCCCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcCCCC
Confidence 99999998 56554433 3333344444444333333455699999999999999999999999985
No 320
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=99.95 E-value=5.3e-28 Score=255.39 Aligned_cols=204 Identities=15% Similarity=0.136 Sum_probs=155.2
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC---------------------CCCCCHH
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---------------------KRSVDVY 121 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~---------------------~~~l~~~ 121 (720)
..+|..++++++||||+++++ ++..+. ..+++||| .+++|.+++... ...+++.
T Consensus 55 ~~~ei~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 130 (288)
T cd05050 55 FQREAALMAEFDHPNIVKLLG-VCAVGK---PMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCT 130 (288)
T ss_pred HHHHHHHHHhcCCCchheEEE-EEcCCC---ccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHH
Confidence 346788999999999999999 555543 56999999 889999999532 1247888
Q ss_pred HHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhh
Q 004989 122 ECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQR 201 (720)
Q Consensus 122 ~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (720)
+++.++.||+.||.|||++|++||||||+||+++.++.++++|||.+........
T Consensus 131 ~~~~~~~~i~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~------------------------- 185 (288)
T cd05050 131 EQLCIAKQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADY------------------------- 185 (288)
T ss_pred HHHHHHHHHHHHHHHHHhCCeecccccHhheEecCCCceEECccccceecccCcc-------------------------
Confidence 9999999999999999999999999999999999999999999988743211100
Q ss_pred hhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcc
Q 004989 202 RTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPE 281 (720)
Q Consensus 202 r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE 281 (720)
+ . .......+..|+|||
T Consensus 186 --------~---~----------------------------------------------------~~~~~~~~~~y~aPE 202 (288)
T cd05050 186 --------Y---K----------------------------------------------------ASENDAIPIRWMPPE 202 (288)
T ss_pred --------c---c----------------------------------------------------ccCCCccChhhcCHH
Confidence 0 0 000012356799999
Q ss_pred cccCCCCCccccchhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHH
Q 004989 282 ELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGE 357 (720)
Q Consensus 282 ~l~~~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~e 357 (720)
.+.+..++.++|||||||++|||++ ||.+.... .....+.....++......+...+|+.+||..+|.+|||+.|
T Consensus 203 ~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~e 281 (288)
T cd05050 203 SIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHE-EVIYYVRDGNVLSCPDNCPLELYNLMRLCWSKLPSDRPSFAS 281 (288)
T ss_pred HHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH-HHHHHHhcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHH
Confidence 9988889999999999999999986 55544333 344444444433322223345669999999999999999999
Q ss_pred HHc
Q 004989 358 LLQ 360 (720)
Q Consensus 358 iL~ 360 (720)
+++
T Consensus 282 l~~ 284 (288)
T cd05050 282 INR 284 (288)
T ss_pred HHH
Confidence 875
No 321
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.95 E-value=1e-27 Score=252.17 Aligned_cols=203 Identities=19% Similarity=0.193 Sum_probs=149.1
Q ss_pred cccCCCCCceecccceeecCC-CCCcEEEEEecCCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCC
Q 004989 71 LTHGDHLRNQGGLSGVCENEA-AIDPFVHAIEWGDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 148 (720)
Q Consensus 71 L~~l~HpnIV~l~~~~~~~~~-~~~~~~lv~E~~ggsL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLK 148 (720)
+..++||||+++++.+...+. ....++++|||.+++|.+++... ...+++..++.++.||+.||.|||+.|++|+||+
T Consensus 55 l~~~~h~~i~~~~~~~~~~~~~~~~~~~l~~e~~~~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~ 134 (287)
T cd07838 55 LESFEHPNIVRLLDVCHGPRTDRELKLTLVFEHVDQDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLK 134 (287)
T ss_pred hhccCCCCcceEEEEEeeccCCCCceeEEEehhcccCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCC
Confidence 445679999999994443321 22348999999667899998543 3358999999999999999999999999999999
Q ss_pred CCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccC
Q 004989 149 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 228 (720)
Q Consensus 149 P~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~ 228 (720)
|+||+++.++.++|+|||.+........
T Consensus 135 ~~nili~~~~~~~l~dfg~~~~~~~~~~---------------------------------------------------- 162 (287)
T cd07838 135 PQNILVTSDGQVKIADFGLARIYSFEMA---------------------------------------------------- 162 (287)
T ss_pred hhhEEEccCCCEEEeccCcceeccCCcc----------------------------------------------------
Confidence 9999999999999999988733211100
Q ss_pred CCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhccc--
Q 004989 229 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 306 (720)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt-- 306 (720)
.....++..|+|||.+.+..++.++|||||||++|||++
T Consensus 163 ---------------------------------------~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~ 203 (287)
T cd07838 163 ---------------------------------------LTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRR 203 (287)
T ss_pred ---------------------------------------cccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCC
Confidence 000246888999999998889999999999999999999
Q ss_pred -cCCCCchHHHHHHHhhcCC-----------------CCc----cc----cccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 307 -PFSTGEEKTRTMSSLRHRV-----------------LPP----QL----LLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 307 -pf~~~~~~~~~~~~l~~~~-----------------~p~----~~----~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
||............+.... ++. .+ ....+...+||.+||..||.+||++.++++
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 204 PLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred CcccCCChHHHHHHHHHHcCCCChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence 4444332221111111000 000 00 011233458999999999999999999999
Q ss_pred Cccc
Q 004989 361 SEFL 364 (720)
Q Consensus 361 hp~~ 364 (720)
||||
T Consensus 284 ~~~~ 287 (287)
T cd07838 284 HPYF 287 (287)
T ss_pred CcCC
Confidence 9997
No 322
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=99.95 E-value=1.1e-27 Score=249.12 Aligned_cols=204 Identities=20% Similarity=0.256 Sum_probs=158.6
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~---~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
+..+|..++.+++|+||+++++ .+.... .++++||| .+++|.+++.. ....+++..++.++.||+.||.|||
T Consensus 48 ~~~~ei~~l~~~~~~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh 123 (267)
T cd08224 48 DCLKEIDLLKQLDHPNVIKYLA-SFIENN---ELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMH 123 (267)
T ss_pred HHHHHHHHHHhCCCCCeeeeee-eeecCC---eEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHH
Confidence 4447788999999999999999 444432 57999999 88999999842 3445899999999999999999999
Q ss_pred HCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCC
Q 004989 139 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
+.||+||||||+||+++.++.++++|||.+........
T Consensus 124 ~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~------------------------------------------ 161 (267)
T cd08224 124 SKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT------------------------------------------ 161 (267)
T ss_pred hCCEecCCcChhhEEECCCCcEEEeccceeeeccCCCc------------------------------------------
Confidence 99999999999999999999999999887632211000
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhh
Q 004989 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
......|++.|+|||.+.+..++.++||||||
T Consensus 162 ------------------------------------------------~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG 193 (267)
T cd08224 162 ------------------------------------------------AAHSLVGTPYYMSPERIHENGYNFKSDIWSLG 193 (267)
T ss_pred ------------------------------------------------ccceecCCccccCHHHhccCCCCchhcHHHHH
Confidence 00013568899999999888899999999999
Q ss_pred chhhhccc---cCCCCc-hHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 299 VLLFELFC---PFSTGE-EKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 299 vll~eLlt---pf~~~~-~~~~~~~~l~~~~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|++|+|++ ||.... ........+..+..++......+ ...+++.+||.++|++|||+.+|++
T Consensus 194 ~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~ 260 (267)
T cd08224 194 CLLYEMAALQSPFYGDKMNLYSLCKKIEKCDYPPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQ 260 (267)
T ss_pred HHHHHHHHCCCCcccCCccHHHHHhhhhcCCCCCCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 99999999 554332 22334445555555544432333 4559999999999999999999885
No 323
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.95 E-value=1.1e-27 Score=256.69 Aligned_cols=204 Identities=16% Similarity=0.170 Sum_probs=152.7
Q ss_pred chhhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC---------------CCCCCHHHHHHH
Q 004989 64 KHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---------------KRSVDVYECLHI 126 (720)
Q Consensus 64 ~~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~---------------~~~l~~~~~~~i 126 (720)
...|..++.++ +||||+++++ ++.... .+|++||| .+++|.+++... ...+++.++..+
T Consensus 64 ~~~E~~~l~~l~~h~~iv~~~~-~~~~~~---~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 139 (314)
T cd05099 64 LISEMELMKLIGKHKNIINLLG-VCTQEG---PLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSC 139 (314)
T ss_pred HHHHHHHHHhccCCCCeeeEEE-EEccCC---ceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHH
Confidence 34667788888 6999999999 554432 57999999 899999999432 134889999999
Q ss_pred HHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhccc
Q 004989 127 FRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLR 206 (720)
Q Consensus 127 ~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 206 (720)
+.||+.||.|||++||+||||||+|||++.++.+||+|||.++.......
T Consensus 140 ~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~------------------------------ 189 (314)
T cd05099 140 AYQVARGMEYLESRRCIHRDLAARNVLVTEDNVMKIADFGLARGVHDIDY------------------------------ 189 (314)
T ss_pred HHHHHHHHHHHHHCCeeeccccceeEEEcCCCcEEEcccccccccccccc------------------------------
Confidence 99999999999999999999999999999999999999988743211000
Q ss_pred ccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC
Q 004989 207 REDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA 286 (720)
Q Consensus 207 l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 286 (720)
. . ......++..|+|||++.+.
T Consensus 190 ---~--------------------------------------------------~-----~~~~~~~~~~y~aPE~~~~~ 211 (314)
T cd05099 190 ---Y--------------------------------------------------K-----KTSNGRLPVKWMAPEALFDR 211 (314)
T ss_pred ---c--------------------------------------------------c-----ccccCCCCccccCHHHHccC
Confidence 0 0 00001235679999999888
Q ss_pred CCCccccchhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 287 PVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 287 ~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
.++.++|||||||++|||++ ||..... ......+.....+........+..+|+.+||..+|++|||+.++++
T Consensus 212 ~~~~~~DiwslG~~l~el~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~ 288 (314)
T cd05099 212 VYTHQSDVWSFGILMWEIFTLGGSPYPGIPV-EELFKLLREGHRMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVE 288 (314)
T ss_pred CcCccchhhHHHHHHHHHHhCCCCCCCCCCH-HHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 89999999999999999998 4544332 2334444433322222222335569999999999999999999985
No 324
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=99.95 E-value=8.4e-28 Score=250.01 Aligned_cols=201 Identities=13% Similarity=0.130 Sum_probs=152.9
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
.+|..+++.++||||+++++ ++... ..+++||| .+++|.+++.. ....+++..+..++.||+.||.|||+.||
T Consensus 49 ~~E~~~l~~l~h~~i~~~~~-~~~~~----~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i 123 (260)
T cd05069 49 LQEAQIMKKLRHDKLVPLYA-VVSEE----PIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNY 123 (260)
T ss_pred HHHHHHHHhCCCCCeeeEEE-EEcCC----CcEEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence 36777999999999999998 44322 46899999 88899999954 33458999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+|+||||+||++++++.++|+|||.+.........
T Consensus 124 ~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~--------------------------------------------- 158 (260)
T cd05069 124 IHRDLRAANILVGDNLVCKIADFGLARLIEDNEYT--------------------------------------------- 158 (260)
T ss_pred eecccCcceEEEcCCCeEEECCCccceEccCCccc---------------------------------------------
Confidence 99999999999999999999998877332111000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......++..|+|||.+.+..++.++|||||||++|
T Consensus 159 --------------------------------------------~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~ 194 (260)
T cd05069 159 --------------------------------------------ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLT 194 (260)
T ss_pred --------------------------------------------ccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHH
Confidence 000023467799999998888999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 303 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
||++ ||...... .....+.....++..........+|+.+||.+||.+||+++++++
T Consensus 195 el~t~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 255 (260)
T cd05069 195 ELVTKGRVPYPGMVNR-EVLEQVERGYRMPCPQGCPESLHELMKLCWKKDPDERPTFEYIQS 255 (260)
T ss_pred HHHhCCCCCCCCCCHH-HHHHHHHcCCCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 9997 55544332 334444443322222222234459999999999999999999875
No 325
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=99.95 E-value=9e-28 Score=250.37 Aligned_cols=202 Identities=14% Similarity=0.110 Sum_probs=153.9
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
..+|..++.+++||||+++++ .+... ..|++||| .+++|.+++.+ .+..+++..++.++.||+.||.|||+.|
T Consensus 48 ~~~E~~~l~~l~~~~i~~~~~-~~~~~----~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~ 122 (262)
T cd05071 48 FLQEAQVMKKLRHEKLVQLYA-VVSEE----PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN 122 (262)
T ss_pred HHHHHHHHHhCCCCCcceEEE-EECCC----CcEEEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 346777999999999999998 44332 46899999 88999999954 3345899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.++|+|||.+....... +.
T Consensus 123 i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~----------------------------------~~---------- 158 (262)
T cd05071 123 YVHRDLRAANILVGENLVCKVADFGLARLIEDNE----------------------------------YT---------- 158 (262)
T ss_pred ccccccCcccEEEcCCCcEEeccCCceeeccccc----------------------------------cc----------
Confidence 9999999999999999999999998874321110 00
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......++..|+|||++.+..++.++|||||||++
T Consensus 159 ---------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l 193 (262)
T cd05071 159 ---------------------------------------------ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILL 193 (262)
T ss_pred ---------------------------------------------cccCCcccceecCHhHhccCCCCchhhHHHHHHHH
Confidence 00002356789999999888899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||...... ..+..+......+......+...+|+.+||+++|++||++.++++
T Consensus 194 ~ellt~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~ 255 (262)
T cd05071 194 TELTTKGRVPYPGMVNR-EVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQA 255 (262)
T ss_pred HHHHcCCCCCCCCCChH-HHHHHHhcCCCCCCccccCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 99998 56544333 333333333222222223334559999999999999999999875
No 326
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=99.95 E-value=8.8e-28 Score=250.82 Aligned_cols=208 Identities=14% Similarity=0.113 Sum_probs=156.2
Q ss_pred chhhhhhcccCCCCCceecccceeecCC--CCCcEEEEEec-CCCCHHHHHhC-----CCCCCCHHHHHHHHHHHHHHHH
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEA--AIDPFVHAIEW-GDVSLRQWLDK-----PKRSVDVYECLHIFRQIVEIVY 135 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~--~~~~~~lv~E~-~ggsL~~~L~~-----~~~~l~~~~~~~i~~QIl~aL~ 135 (720)
..+|..+++.++||||+++++.++.... .....+++||| .+++|..++.. ....+++..++.++.||+.||.
T Consensus 48 ~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~ 127 (273)
T cd05035 48 FLSEAACMKDFDHPNVMKLIGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGME 127 (273)
T ss_pred HHHHHHHHHhCCCCCeeeEEeeeccCCccccCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHH
Confidence 3467778999999999999994443321 22347999999 99999998832 1235899999999999999999
Q ss_pred HHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccC
Q 004989 136 AAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 215 (720)
Q Consensus 136 yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~ 215 (720)
|||++||+||||||+||++++++.+||+|||.++....... +
T Consensus 128 ~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~---------------------------------~----- 169 (273)
T cd05035 128 YLSNRNFIHRDLAARNCMLREDMTVCVADFGLSKKIYSGDY---------------------------------Y----- 169 (273)
T ss_pred HHHhCCeeccccchheEEECCCCeEEECCccceeecccccc---------------------------------c-----
Confidence 99999999999999999999999999999988743211100 0
Q ss_pred CCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccch
Q 004989 216 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIY 295 (720)
Q Consensus 216 ~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIw 295 (720)
. ......++..|+|||.+.+..++.++|||
T Consensus 170 ------------------------------~--------------------~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~ 199 (273)
T cd05035 170 ------------------------------R--------------------QGRIAKMPVKWIAIESLADRVYTSKSDVW 199 (273)
T ss_pred ------------------------------c--------------------ccccccCCccccCHhhcccCCCCcccchH
Confidence 0 00001236679999999888899999999
Q ss_pred hhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 296 RLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 296 SLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
||||++|||++ ||..... ......+.....+.......+...+++.+||..||.+|||+.|++.
T Consensus 200 SlG~il~el~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~ 267 (273)
T cd05035 200 AFGVTMWEIATRGQTPYPGVEN-HEIYDYLRHGNRLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLRE 267 (273)
T ss_pred HHHHHHHHHHhCCCCCCCCCCH-HHHHHHHHcCCCCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 99999999997 4544333 3444444444433333334455669999999999999999999986
No 327
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=99.95 E-value=8.2e-28 Score=248.98 Aligned_cols=202 Identities=15% Similarity=0.189 Sum_probs=153.9
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..|..++.+++||||+++++ ++.... .++++||| .+++|.+++......+++..++.++.|++.||.|||+.|++
T Consensus 47 ~~e~~~l~~l~~~~i~~~~~-~~~~~~---~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~ 122 (256)
T cd05112 47 IEEAQVMMKLSHPKLVQLYG-VCTERS---PICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVI 122 (256)
T ss_pred HHHHHHHHhCCCCCeeeEEE-EEccCC---ceEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 35777999999999999999 444433 57999999 89999999965555689999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
|+||||+||+++.++.++|+|||.+...+.....
T Consensus 123 h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~---------------------------------------------- 156 (256)
T cd05112 123 HRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYT---------------------------------------------- 156 (256)
T ss_pred ccccccceEEEcCCCeEEECCCcceeecccCccc----------------------------------------------
Confidence 9999999999999999999999877432111000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......++..|+|||.+.+..++.++|||||||++||
T Consensus 157 -------------------------------------------~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~e 193 (256)
T cd05112 157 -------------------------------------------SSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWE 193 (256)
T ss_pred -------------------------------------------ccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHH
Confidence 0000134678999999988889999999999999999
Q ss_pred ccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 304 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 304 Llt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|++ ||..... ......+.....+...........+|+.+||+.+|++|||+.++++
T Consensus 194 l~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~ 253 (256)
T cd05112 194 VFSEGKTPYENRSN-SEVVETINAGFRLYKPRLASQSVYELMQHCWKERPEDRPSFSLLLH 253 (256)
T ss_pred HHcCCCCCCCcCCH-HHHHHHHhCCCCCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHH
Confidence 997 5544332 2334444432221111112234459999999999999999999986
No 328
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.95 E-value=1.2e-27 Score=254.07 Aligned_cols=211 Identities=18% Similarity=0.210 Sum_probs=154.8
Q ss_pred chhhhhhcccCCCCCceecccceeecCC-------CCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHH
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEA-------AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYA 136 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~-------~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~y 136 (720)
..+|..++.+++||||+++++ ++.+.. ....+|+++||.+++|.+++......+++..++.++.||+.||.|
T Consensus 53 ~~~e~~~~~~l~h~~i~~~~~-~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~ 131 (302)
T cd07864 53 AIREIKILRQLNHRNIVNLKE-IVTDKQDALDFKKDKGAFYLVFEYMDHDLMGLLESGLVHFSEDHIKSFMKQLLEGLNY 131 (302)
T ss_pred HHHHHHHHHhCCCCCeeeeeh-eecCcchhhhccccCCcEEEEEcccCccHHHHHhcCCCCCCHHHHHHHHHHHHHHHHH
Confidence 346778899999999999999 443332 123689999996668888886555569999999999999999999
Q ss_pred HHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCC
Q 004989 137 AHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 216 (720)
Q Consensus 137 LHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~ 216 (720)
||+.||+|+||||+||+++.++.+||+|||.+........
T Consensus 132 LH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~---------------------------------------- 171 (302)
T cd07864 132 CHKKNFLHRDIKCSNILLNNKGQIKLADFGLARLYNSEES---------------------------------------- 171 (302)
T ss_pred HHhCCeecCCCCHHHEEECCCCcEEeCcccccccccCCcc----------------------------------------
Confidence 9999999999999999999999999999988743211100
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC-CCCccccch
Q 004989 217 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIY 295 (720)
Q Consensus 217 ~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIw 295 (720)
. ......++..|+|||.+.+. .++.++|||
T Consensus 172 ---------------------------------------------~----~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~ 202 (302)
T cd07864 172 ---------------------------------------------R----PYTNKVITLWYRPPELLLGEERYGPAIDVW 202 (302)
T ss_pred ---------------------------------------------c----ccccceeccCccChHHhcCCCCCCchhHHH
Confidence 0 00002457789999988654 378999999
Q ss_pred hhhchhhhccc---cCCCCchHHHH--HHHhhcCCCCcc--------------------------ccccCchHHHHHHHc
Q 004989 296 RLGVLLFELFC---PFSTGEEKTRT--MSSLRHRVLPPQ--------------------------LLLKFPKEASFCLWL 344 (720)
Q Consensus 296 SLGvll~eLlt---pf~~~~~~~~~--~~~l~~~~~p~~--------------------------~~~~~p~~~~Li~~~ 344 (720)
||||++|||++ ||......... +........+.. +....+...+|+.+|
T Consensus 203 slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 282 (302)
T cd07864 203 SCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHM 282 (302)
T ss_pred HHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHH
Confidence 99999999999 45433322111 111111111100 111223445999999
Q ss_pred CCCCCCCCCChHHHHcCccc
Q 004989 345 LHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 345 L~~dP~~Rpta~eiL~hp~~ 364 (720)
|+.+|.+||++.+++.||||
T Consensus 283 l~~~P~~Rp~~~~il~~~~~ 302 (302)
T cd07864 283 LTLDPSKRCTAEEALNSPWL 302 (302)
T ss_pred ccCChhhCCCHHHHhcCCCC
Confidence 99999999999999999997
No 329
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.95 E-value=7e-28 Score=257.26 Aligned_cols=205 Identities=17% Similarity=0.171 Sum_probs=154.7
Q ss_pred hchhhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC---------------CCCCHHHHHH
Q 004989 63 RKHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---------------RSVDVYECLH 125 (720)
Q Consensus 63 r~~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~---------------~~l~~~~~~~ 125 (720)
+...|..++..+ +||||+++++ ++.... .+|++||| .+++|.++|.... ..++..+++.
T Consensus 69 ~~~~e~~~l~~l~~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 144 (307)
T cd05098 69 DLISEMEMMKMIGKHKNIINLLG-ACTQDG---PLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVS 144 (307)
T ss_pred HHHHHHHHHHHhcCCCCEeeEEE-EEecCC---ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHH
Confidence 344677788888 7999999999 554443 57999999 8899999995421 2488899999
Q ss_pred HHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcc
Q 004989 126 IFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRL 205 (720)
Q Consensus 126 i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 205 (720)
++.||+.||+|||++|++||||||+||+++.++.++|+|||.+......
T Consensus 145 ~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~~~~kL~dfg~a~~~~~~------------------------------- 193 (307)
T cd05098 145 CAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI------------------------------- 193 (307)
T ss_pred HHHHHHHHHHHHHHCCcccccccHHheEEcCCCcEEECCCccccccccc-------------------------------
Confidence 9999999999999999999999999999999999999999887432110
Q ss_pred cccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC
Q 004989 206 RREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG 285 (720)
Q Consensus 206 ~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 285 (720)
++.. ......+++.|+|||.+.+
T Consensus 194 ---~~~~------------------------------------------------------~~~~~~~~~~y~aPE~~~~ 216 (307)
T cd05098 194 ---DYYK------------------------------------------------------KTTNGRLPVKWMAPEALFD 216 (307)
T ss_pred ---chhh------------------------------------------------------ccccCCCccceeChHHhcc
Confidence 0000 0000124568999999988
Q ss_pred CCCCccccchhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 286 APVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 286 ~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
..++.++|||||||++|||++ ||... ........+.....++......+...+|+.+||+.+|.+||++.++++
T Consensus 217 ~~~~~~~DvwslG~~l~el~~~g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~ 294 (307)
T cd05098 217 RIYTHQSDVWSFGVLLWEIFTLGGSPYPGV-PVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 294 (307)
T ss_pred CCCCcHHHHHHHHHHHHHHHcCCCCCCCcC-CHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence 889999999999999999987 45433 333444444444333322223345569999999999999999999986
No 330
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.95 E-value=1.2e-27 Score=251.54 Aligned_cols=207 Identities=19% Similarity=0.262 Sum_probs=155.3
Q ss_pred hchhhhhhcccCC-CCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 63 RKHSDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~L~~l~-HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~-~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+..+|...+.+++ ||||+++++ ++.++ ...|++|||.+++|.+++.... ..+++..++.++.||+.+|.|||++
T Consensus 43 ~~~~e~~~l~~~~~h~~i~~~~~-~~~~~---~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~ 118 (283)
T cd07830 43 MNLREVKSLRKLNEHPNIVKLKE-VFREN---DELYFVFEYMEGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKH 118 (283)
T ss_pred HHHHHHHHHHhccCCCCchhHHH-HhhcC---CcEEEEEecCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHC
Confidence 3446777888999 999999999 44443 3679999998889999885443 4589999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
|++|+||+|+||+++.++.++|+|||.+.......
T Consensus 119 ~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~--------------------------------------------- 153 (283)
T cd07830 119 GFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRP--------------------------------------------- 153 (283)
T ss_pred CcccCCCChhhEEEcCCCCEEEeecccceeccCCC---------------------------------------------
Confidence 99999999999999999999999988763211000
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC-CCCccccchhhhc
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGV 299 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGv 299 (720)
......++..|+|||++.+. .++.++|||||||
T Consensus 154 ----------------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~ 187 (283)
T cd07830 154 ----------------------------------------------PYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGC 187 (283)
T ss_pred ----------------------------------------------CcCCCCCcccccCceeeecCcCcCCccchhhHHH
Confidence 00013578899999988554 4799999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhh--cC------------------CCC--------ccccccCchHHHHHHHcCCCC
Q 004989 300 LLFELFC---PFSTGEEKTRTMSSLR--HR------------------VLP--------PQLLLKFPKEASFCLWLLHPE 348 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~--~~------------------~~p--------~~~~~~~p~~~~Li~~~L~~d 348 (720)
++|||++ ||.............. .. .++ ..+....+...+|+.+||+.+
T Consensus 188 ~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~ 267 (283)
T cd07830 188 IMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWD 267 (283)
T ss_pred HHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhccccccccccccccHHHHcccCCHHHHHHHHHhcccC
Confidence 9999999 4544333222111110 00 000 001112345569999999999
Q ss_pred CCCCCChHHHHcCccc
Q 004989 349 PSGRPKMGELLQSEFL 364 (720)
Q Consensus 349 P~~Rpta~eiL~hp~~ 364 (720)
|++|||+.|++.||||
T Consensus 268 p~~Rpt~~ei~~~~~~ 283 (283)
T cd07830 268 PKKRPTASQALQHPYF 283 (283)
T ss_pred cccCCCHHHHhhCCCC
Confidence 9999999999999997
No 331
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.95 E-value=8e-28 Score=259.72 Aligned_cols=210 Identities=17% Similarity=0.176 Sum_probs=156.8
Q ss_pred hhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceec
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 145 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHr 145 (720)
.|..++.+++||||+++++.+..... .+|++|||.+++|.+++... .+++..+..++.||+.||.|||++||+||
T Consensus 58 ~E~~~l~~l~hpniv~~~~~~~~~~~---~~~lv~e~~~~~L~~~~~~~--~~~~~~~~~~~~ql~~aL~~LH~~~iiH~ 132 (328)
T cd07856 58 RELKLLKHLRHENIISLSDIFISPLE---DIYFVTELLGTDLHRLLTSR--PLEKQFIQYFLYQILRGLKYVHSAGVVHR 132 (328)
T ss_pred HHHHHHHhcCCCCeeeEeeeEecCCC---cEEEEeehhccCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence 67778999999999999994333232 57899999888999988543 38899999999999999999999999999
Q ss_pred cCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccccc
Q 004989 146 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 225 (720)
Q Consensus 146 DLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~ 225 (720)
||||+||+++.++.++|+|||.+......
T Consensus 133 dl~p~Nili~~~~~~~l~dfg~~~~~~~~--------------------------------------------------- 161 (328)
T cd07856 133 DLKPSNILINENCDLKICDFGLARIQDPQ--------------------------------------------------- 161 (328)
T ss_pred CCCHHHEeECCCCCEEeCccccccccCCC---------------------------------------------------
Confidence 99999999999999999988876321000
Q ss_pred ccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC-CCCCccccchhhhchhhhc
Q 004989 226 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFEL 304 (720)
Q Consensus 226 ~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sDIwSLGvll~eL 304 (720)
.....+++.|+|||.+.+ ..++.++|||||||++|+|
T Consensus 162 ------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el 199 (328)
T cd07856 162 ------------------------------------------MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEM 199 (328)
T ss_pred ------------------------------------------cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHH
Confidence 001356888999999866 4589999999999999999
Q ss_pred cc---cCCCCchHHHH--HHH------------------------hhcC-CCCc-cc-cccCchHHHHHHHcCCCCCCCC
Q 004989 305 FC---PFSTGEEKTRT--MSS------------------------LRHR-VLPP-QL-LLKFPKEASFCLWLLHPEPSGR 352 (720)
Q Consensus 305 lt---pf~~~~~~~~~--~~~------------------------l~~~-~~p~-~~-~~~~p~~~~Li~~~L~~dP~~R 352 (720)
++ ||......... ... +... ..|. .. ....+...++|.+||..+|++|
T Consensus 200 ~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R 279 (328)
T cd07856 200 LEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKR 279 (328)
T ss_pred HhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhC
Confidence 99 55443221100 000 0000 0000 01 1122345699999999999999
Q ss_pred CChHHHHcCcccCCCccchHH
Q 004989 353 PKMGELLQSEFLNEPRDSMEE 373 (720)
Q Consensus 353 pta~eiL~hp~~~~~~~~l~e 373 (720)
||+.+++.||||.....+..+
T Consensus 280 ~t~~ell~~~~~~~~~~~~~~ 300 (328)
T cd07856 280 ISAAEALAHPYLAPYHDPTDE 300 (328)
T ss_pred CCHHHHhcCCccccccCCccc
Confidence 999999999999887666554
No 332
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.95 E-value=6.7e-28 Score=250.42 Aligned_cols=208 Identities=20% Similarity=0.261 Sum_probs=159.0
Q ss_pred chhhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHh---CCCCCCCHHHHHHHHHHHHHHHH
Q 004989 60 FELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLD---KPKRSVDVYECLHIFRQIVEIVY 135 (720)
Q Consensus 60 ~~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~---~~~~~l~~~~~~~i~~QIl~aL~ 135 (720)
...+..+|..++.+++||||+++++ .+.+.. ..+++||| .+++|.+++. .....+++.+++.++.||+.||.
T Consensus 45 ~~~~~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 120 (260)
T cd08222 45 ETVQANQEAQLLSKLDHPAIVKFHA-SFLERD---AFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVH 120 (260)
T ss_pred hHHHHHHHHHHHHhCCCCcHHHHHH-HHhcCC---ceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHH
Confidence 3344556778899999999999999 443333 57999999 8899999884 23456899999999999999999
Q ss_pred HHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccC
Q 004989 136 AAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 215 (720)
Q Consensus 136 yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~ 215 (720)
|||+.|++|+||||+||+++. +.++++|||.+...... .+.
T Consensus 121 ~lH~~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~~---------------------------------~~~----- 161 (260)
T cd08222 121 YMHQRRILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMGS---------------------------------CDL----- 161 (260)
T ss_pred HHHHcCccccCCChhheEeec-CCEeecccCceeecCCC---------------------------------ccc-----
Confidence 999999999999999999974 67999988876332100 000
Q ss_pred CCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccch
Q 004989 216 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIY 295 (720)
Q Consensus 216 ~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIw 295 (720)
.....|++.|+|||.+.+..++.++|+|
T Consensus 162 ----------------------------------------------------~~~~~~~~~~~~pe~~~~~~~~~~~Dv~ 189 (260)
T cd08222 162 ----------------------------------------------------ATTFTGTPYYMSPEALKHQGYDSKSDIW 189 (260)
T ss_pred ----------------------------------------------------ccCCCCCcCccCHHHHccCCCCchhhHH
Confidence 0013468899999999888789999999
Q ss_pred hhhchhhhccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004989 296 RLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 296 SLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
|||+++|+|++ ||...... .....+.....+. +...+ +...+++.+||..+|++||++.++++||||
T Consensus 190 slG~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 260 (260)
T cd08222 190 SLGCILYEMCCLAHAFEGQNFL-SVVLRIVEGPTPS-LPETYSRQLNSIMQSMLNKDPSLRPSAAEILRNPFI 260 (260)
T ss_pred HHHHHHHHHHhCCCCCCCccHH-HHHHHHHcCCCCC-CcchhcHHHHHHHHHHhcCChhhCcCHHHHhhCCCC
Confidence 99999999998 56544333 3333333333333 23333 345599999999999999999999999997
No 333
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=99.95 E-value=9e-28 Score=252.98 Aligned_cols=209 Identities=19% Similarity=0.138 Sum_probs=151.0
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++||||+++++.++..+ ...++++||| .+++|.+++.+....+++..++.++.||+.||.|||++|
T Consensus 51 ~~~~e~~~l~~l~h~~iv~~~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~ 128 (284)
T cd05081 51 DFEREIEILKSLQHDNIVKYKGVCYSAG--RRNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKR 128 (284)
T ss_pred HHHHHHHHHHhCCCCCeeEEEEEEccCC--CCceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3447778999999999999999443322 2357999999 899999999655455899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.++|+|||++....... ++
T Consensus 129 i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~---------------------------------~~----------- 164 (284)
T cd05081 129 YVHRDLATRNILVESENRVKIGDFGLTKVLPQDK---------------------------------EY----------- 164 (284)
T ss_pred ceeccCCHhhEEECCCCeEEECCCcccccccCCC---------------------------------cc-----------
Confidence 9999999999999999999999988874321100 00
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
... .....++..|+|||.+.+..++.++|||||||++
T Consensus 165 -----------------------~~~--------------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l 201 (284)
T cd05081 165 -----------------------YKV--------------------REPGESPIFWYAPESLTESKFSVASDVWSFGVVL 201 (284)
T ss_pred -----------------------eee--------------------cCCCCCceEeeCHHHhccCCcChHHHHHHHHHHH
Confidence 000 0001234569999999888899999999999999
Q ss_pred hhcccc---CCCCchH---------------HHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFCP---FSTGEEK---------------TRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLltp---f~~~~~~---------------~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++. +...... ......+.....++......+...+|+.+||.++|++|||+.|+++
T Consensus 202 ~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 278 (284)
T cd05081 202 YELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELAL 278 (284)
T ss_pred HHHhhcCCcCCCcchhhhhhcccccccccchHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 999982 2111100 0011111222222222222234559999999999999999999986
No 334
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.95 E-value=1e-27 Score=247.17 Aligned_cols=206 Identities=18% Similarity=0.233 Sum_probs=160.6
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++++++||||+++++ ++... ..++++||| .+++|.+++... ..+++..+..++.||+.||.|||+.|
T Consensus 45 ~~~~e~~~l~~l~~~~i~~~~~-~~~~~---~~~~~v~e~~~~~~L~~~~~~~-~~l~~~~~~~~~~~i~~~l~~lH~~~ 119 (254)
T cd06627 45 SIMQEIDLLKNLKHPNIVKYIG-SIETS---DSLYIILEYAENGSLRQIIKKF-GPFPESLVAVYVYQVLQGLAYLHEQG 119 (254)
T ss_pred HHHHHHHHHHhCCCCCccEEEE-EEEeC---CEEEEEEecCCCCcHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence 4447778899999999999999 44443 257999999 889999999554 45999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.++|+|||.+........
T Consensus 120 i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~--------------------------------------------- 154 (254)
T cd06627 120 VIHRDIKAANILTTKDGVVKLADFGVATKLNDVSK--------------------------------------------- 154 (254)
T ss_pred cccCCCCHHHEEECCCCCEEEeccccceecCCCcc---------------------------------------------
Confidence 99999999999999999999999988743211100
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......++..|+|||.+.+..++.++||||||+++
T Consensus 155 ---------------------------------------------~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l 189 (254)
T cd06627 155 ---------------------------------------------DDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTV 189 (254)
T ss_pred ---------------------------------------------cccccccchhhcCHhhhcCCCCCcchhHHHHHHHH
Confidence 00013568899999999887789999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
|+|++ ||...... ..+..+.....++......+...+|+.+||..+|++|||+.+++.||||
T Consensus 190 ~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~~ 254 (254)
T cd06627 190 IELLTGNPPYYDLNPM-AALFRIVQDDHPPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLKHPWI 254 (254)
T ss_pred HHHHhCCCCCCCccHH-HHHHHHhccCCCCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhcCCCC
Confidence 99999 55544433 2222232333332222223445599999999999999999999999997
No 335
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.95 E-value=9.5e-28 Score=252.22 Aligned_cols=209 Identities=19% Similarity=0.205 Sum_probs=155.8
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..+|..++.+++||||+++++ ++.... ....+++|||.+++|.+++......+++..++.++.||+.||.|||++|++
T Consensus 45 ~~~e~~~l~~l~~~~i~~~~~-~~~~~~-~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~ 122 (287)
T cd07840 45 AIREIKLLQKLRHPNIVRLKE-IVTSKG-KGSIYMVFEYMDHDLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGIL 122 (287)
T ss_pred HHHHHHHHHhccCCCeeehee-eEecCC-CCcEEEEeccccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Confidence 336777899999999999999 443331 236899999966799999966545699999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
|+||||+||+++.++.++|+|||.+........
T Consensus 123 h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~----------------------------------------------- 155 (287)
T cd07840 123 HRDIKGSNILINNDGVLKLADFGLARPYTKRNS----------------------------------------------- 155 (287)
T ss_pred eccCcHHHeEEcCCCCEEEccccceeeccCCCc-----------------------------------------------
Confidence 999999999999999999999988743211100
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC-CCCccccchhhhchhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLF 302 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGvll~ 302 (720)
.......++..|+|||.+.+. .++.++|||||||++|
T Consensus 156 ------------------------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~ 193 (287)
T cd07840 156 ------------------------------------------ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILA 193 (287)
T ss_pred ------------------------------------------ccccccccccccCCceeeEccccCChHHHHHHHHHHHH
Confidence 000012467889999987654 4789999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcC--CC-----------------------C----cccccc-CchHHHHHHHcCCCCC
Q 004989 303 ELFC---PFSTGEEKTRTMSSLRHR--VL-----------------------P----PQLLLK-FPKEASFCLWLLHPEP 349 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~--~~-----------------------p----~~~~~~-~p~~~~Li~~~L~~dP 349 (720)
||++ ||....... ....+... .. + ..+... .+...+++.+||..+|
T Consensus 194 el~t~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P 272 (287)
T cd07840 194 ELFLGKPIFQGSTELE-QLEKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDP 272 (287)
T ss_pred HHHhCCCCCCCCChHH-HHHHHHHHhCCCchhhccccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCCh
Confidence 9999 555443321 11111110 00 0 001111 3444599999999999
Q ss_pred CCCCChHHHHcCccc
Q 004989 350 SGRPKMGELLQSEFL 364 (720)
Q Consensus 350 ~~Rpta~eiL~hp~~ 364 (720)
.+||++.++++||||
T Consensus 273 ~~Rp~~~~~l~~~~~ 287 (287)
T cd07840 273 KKRISADQALQHEYF 287 (287)
T ss_pred hhCcCHHHHhhCcCC
Confidence 999999999999997
No 336
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=99.95 E-value=1.2e-27 Score=247.98 Aligned_cols=199 Identities=15% Similarity=0.151 Sum_probs=153.5
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~-~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+...|..++..++||||+++++ ++.+. ...+++||| .+++|.+++.... ..+++..++.++.||+.||.|||++
T Consensus 46 ~~~~e~~~l~~l~~~~i~~~~~-~~~~~---~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~ 121 (256)
T cd05039 46 AFLAEASVMTTLRHPNLVQLLG-VVLQG---NPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEK 121 (256)
T ss_pred HHHHHHHHHHhcCCcceeeeEE-EEcCC---CCeEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 4447778999999999999999 44443 357999999 8899999995433 3589999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+|+||||+||+++.++.++|+|||.+.......
T Consensus 122 ~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~--------------------------------------------- 156 (256)
T cd05039 122 NFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQ--------------------------------------------- 156 (256)
T ss_pred CccchhcccceEEEeCCCCEEEccccccccccccc---------------------------------------------
Confidence 99999999999999999999999988873321000
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhch
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
....++..|+|||.+.+..++.++|||||||+
T Consensus 157 ------------------------------------------------~~~~~~~~~~ape~~~~~~~~~~~Di~slG~i 188 (256)
T cd05039 157 ------------------------------------------------DSGKLPVKWTAPEALREKKFSTKSDVWSFGIL 188 (256)
T ss_pred ------------------------------------------------ccCCCcccccCchhhcCCcCCcHHHHHHHHHH
Confidence 00123557999999988889999999999999
Q ss_pred hhhccc----cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 301 LFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 301 l~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
+|||++ ||..... ......+.....+ ...... +...+|+.+||..+|++||++.+++.
T Consensus 189 l~~l~~~g~~p~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 251 (256)
T cd05039 189 LWEIYSFGRVPYPRIPL-KDVVPHVEKGYRM-EAPEGCPPEVYKVMKDCWELDPAKRPTFKQLRE 251 (256)
T ss_pred HHHHHhcCCCCCCCCCH-HHHHHHHhcCCCC-CCccCCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence 999986 5544332 2333333333222 222233 44559999999999999999999985
No 337
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=99.95 E-value=1.1e-27 Score=260.25 Aligned_cols=207 Identities=19% Similarity=0.218 Sum_probs=153.4
Q ss_pred chhhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC--------------------------
Q 004989 64 KHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-------------------------- 115 (720)
Q Consensus 64 ~~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~-------------------------- 115 (720)
..+|..+|.++ +||||+++++.+...+ ..++++||| .+++|.+++....
T Consensus 57 ~~~E~~~l~~l~~h~niv~~~~~~~~~~---~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (343)
T cd05103 57 LMSELKILIHIGHHLNVVNLLGACTKPG---GPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISED 133 (343)
T ss_pred HHHHHHHHHhccCCccHhhhcceeecCC---CceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhh
Confidence 33677788888 6899999999433332 257899999 9999999984321
Q ss_pred ----------------------------------------CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEc
Q 004989 116 ----------------------------------------RSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMS 155 (720)
Q Consensus 116 ----------------------------------------~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~ 155 (720)
..++...+..++.||+.||.|||++||+||||||+|||++
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~ 213 (343)
T cd05103 134 LKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLS 213 (343)
T ss_pred hhhhccccccccccccccccCCCccccchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEc
Confidence 2367788899999999999999999999999999999999
Q ss_pred cCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCCCccccc
Q 004989 156 SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTH 235 (720)
Q Consensus 156 ~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~ 235 (720)
.++.++|+|||++....... .+
T Consensus 214 ~~~~~kl~dfg~~~~~~~~~---------------------------------~~------------------------- 235 (343)
T cd05103 214 ENNVVKICDFGLARDIYKDP---------------------------------DY------------------------- 235 (343)
T ss_pred CCCcEEEEecccccccccCc---------------------------------ch-------------------------
Confidence 99999999999874321110 00
Q ss_pred cccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhccc----cCCCC
Q 004989 236 VVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC----PFSTG 311 (720)
Q Consensus 236 ~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt----pf~~~ 311 (720)
. ......+++.|+|||.+.+..++.++|||||||++|+|++ ||...
T Consensus 236 ------------~------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~ 285 (343)
T cd05103 236 ------------V------------------RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 285 (343)
T ss_pred ------------h------------------hcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCc
Confidence 0 0000234677999999988889999999999999999986 55543
Q ss_pred chHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004989 312 EEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 312 ~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~h 361 (720)
.........+..+..++......+...+++.+||+.||++|||+.||++|
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~ 335 (343)
T cd05103 286 KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 335 (343)
T ss_pred cccHHHHHHHhccCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 32223333333333222222233566799999999999999999999874
No 338
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.95 E-value=4.8e-28 Score=265.18 Aligned_cols=200 Identities=19% Similarity=0.229 Sum_probs=159.2
Q ss_pred hhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCcee
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|+.++.+++|||||++||+..... ++|+|||+ .||+|.++|++.+..++..+...++.+.+.||+|||++++||
T Consensus 210 ~EArvMr~l~H~NVVr~yGVa~~~~----Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IH 285 (474)
T KOG0194|consen 210 KEARVMRQLNHPNVVRFYGVAVLEE----PLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNCIH 285 (474)
T ss_pred HHHHHHHhCCCCCEEEEEEEEcCCC----ccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCCcc
Confidence 8999999999999999999444333 68999999 999999999777667999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccc
Q 004989 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||-..|+|++.++.+||+|||+++.-..... ..+
T Consensus 286 RDIAARNcL~~~~~~vKISDFGLs~~~~~~~~-------------------------------~~~-------------- 320 (474)
T KOG0194|consen 286 RDIAARNCLYSKKGVVKISDFGLSRAGSQYVM-------------------------------KKF-------------- 320 (474)
T ss_pred hhHhHHHheecCCCeEEeCccccccCCcceee-------------------------------ccc--------------
Confidence 99999999999999999999988732100000 000
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhc
Q 004989 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 304 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eL 304 (720)
..--...|+|||.+....|++++|||||||++||+
T Consensus 321 ---------------------------------------------~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Ei 355 (474)
T KOG0194|consen 321 ---------------------------------------------LKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEI 355 (474)
T ss_pred ---------------------------------------------cccCcceecChhhhccCccccccchhheeeeEEee
Confidence 00114579999999998999999999999999999
Q ss_pred cc----cCCCCchHHHHHHHhhcCCCCccccccCchHH-HHHHHcCCCCCCCCCChHHHHc
Q 004989 305 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 305 lt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~-~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
++ ||.+.... .....+....++...+...|.+. .++..|+..+|++||++.++.+
T Consensus 356 f~~g~~Py~g~~~~-~v~~kI~~~~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~ 415 (474)
T KOG0194|consen 356 FENGAEPYPGMKNY-EVKAKIVKNGYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKK 415 (474)
T ss_pred eccCCCCCCCCCHH-HHHHHHHhcCccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHH
Confidence 98 77776655 44455533223333333555554 8889999999999999999875
No 339
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=99.95 E-value=5.2e-28 Score=283.86 Aligned_cols=220 Identities=19% Similarity=0.318 Sum_probs=152.6
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC----------CCCCCHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP----------KRSVDVYECLHIFRQIV 131 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~----------~~~l~~~~~~~i~~QIl 131 (720)
|..+|..++++++||||+++++ ++.++. ..|++||| .|++|.+++... ...++...++.++.||+
T Consensus 48 rflrEi~ILs~L~HPNIVkl~~-v~~d~~---~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa 123 (932)
T PRK13184 48 RFLREAKIAADLIHPGIVPVYS-ICSDGD---PVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKIC 123 (932)
T ss_pred HHHHHHHHHHhCCCcCcCeEEE-EEeeCC---EEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHH
Confidence 4457888999999999999999 554443 57999999 999999998431 12355678899999999
Q ss_pred HHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccc
Q 004989 132 EIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQ 211 (720)
Q Consensus 132 ~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfg 211 (720)
.||+|||++||+||||||+|||++.++.++|+|||++.......... .+.
T Consensus 124 ~AL~yLHs~GIIHRDLKPeNILLd~dg~vKLiDFGLAk~i~~~~~~~-----------------------------~~l- 173 (932)
T PRK13184 124 ATIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEEDL-----------------------------LDI- 173 (932)
T ss_pred HHHHHHHHCCccccCCchheEEEcCCCCEEEEecCcceecccccccc-----------------------------ccc-
Confidence 99999999999999999999999999999999999985542110000 000
Q ss_pred cccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCcc
Q 004989 212 LVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCA 291 (720)
Q Consensus 212 la~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~ 291 (720)
.... ...+ ... .......+||+.|+|||++.+..++.+
T Consensus 174 --~~~~----~~s~-----------------------------------~s~-~t~~g~~vGT~~YmAPE~l~g~~~S~k 211 (932)
T PRK13184 174 --DVDE----RNIC-----------------------------------YSS-MTIPGKIVGTPDYMAPERLLGVPASES 211 (932)
T ss_pred --cccc----cccc-----------------------------------ccc-cccCCCCCCCCCCCCHHHhcCCCCCcH
Confidence 0000 0000 000 000012479999999999999999999
Q ss_pred ccchhhhchhhhccc---cCCCCchHHHHHHHhhcCCCCccc--cccC-chHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 292 SDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQL--LLKF-PKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 292 sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~--~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
+|||||||++|||++ ||.............. ..|... .... +...+++.+||.+||++||+..+.+.
T Consensus 212 SDIWSLGVILyELLTG~~PF~~~~~~ki~~~~~i--~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl 284 (932)
T PRK13184 212 TDIYALGVILYQMLTLSFPYRRKKGRKISYRDVI--LSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELK 284 (932)
T ss_pred hHHHHHHHHHHHHHHCCCCCCCcchhhhhhhhhc--cChhhccccccCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 999999999999999 5654332211111111 111111 1123 34459999999999999987655543
No 340
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=99.95 E-value=1.3e-27 Score=248.17 Aligned_cols=202 Identities=16% Similarity=0.151 Sum_probs=155.8
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
...|..++..++||||+++++ ++.... .++++||| .+++|.+++.. .+..+++..++.++.||+.||.|||++|
T Consensus 49 ~~~e~~~l~~l~~~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~ 124 (261)
T cd05148 49 FQKEVQALKRLRHKHLISLFA-VCSVGE---PVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQN 124 (261)
T ss_pred HHHHHHHHhcCCCcchhheee-eEecCC---CeEEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 346777899999999999999 554443 57999999 88999999954 3445899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+|+||||+||+++.++.++|+|||.+....... +
T Consensus 125 i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~----------------------------------~----------- 159 (261)
T cd05148 125 SIHRDLAARNILVGEDLVCKVADFGLARLIKEDV----------------------------------Y----------- 159 (261)
T ss_pred eeccccCcceEEEcCCceEEEccccchhhcCCcc----------------------------------c-----------
Confidence 9999999999999999999999998874321110 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
. .....++..|+|||.+.+..++.++|||||||++
T Consensus 160 ---~------------------------------------------~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l 194 (261)
T cd05148 160 ---L------------------------------------------SSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILL 194 (261)
T ss_pred ---c------------------------------------------ccCCCCceEecCHHHHccCCCCchhhHHHHHHHH
Confidence 0 0002346789999999888899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|+|++ ||...... .....+.....++......+...+++.+||..||.+|||+.++++
T Consensus 195 ~~l~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~ 256 (261)
T cd05148 195 YEMFTYGQVPYPGMNNH-EVYDQITAGYRMPCPAKCPQEIYKIMLECWAAEPEDRPSFKALRE 256 (261)
T ss_pred HHHHcCCCCCCCcCCHH-HHHHHHHhCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 99997 55544332 333333333333332333345569999999999999999999975
No 341
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=99.95 E-value=1.1e-27 Score=253.25 Aligned_cols=205 Identities=16% Similarity=0.184 Sum_probs=154.8
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC-----------------------CCCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-----------------------KRSV 118 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~-----------------------~~~l 118 (720)
+...|..+|+.++||||+++++ .+.... ..+++||| .+++|.+++... ...+
T Consensus 49 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 124 (290)
T cd05045 49 DLLSEFNLLKQVNHPHVIKLYG-ACSQDG---PLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERAL 124 (290)
T ss_pred HHHHHHHHHhhCCCCCEeeEEE-EEecCC---CcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCcccccc
Confidence 3447788999999999999999 444433 46899999 889999998431 1347
Q ss_pred CHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhh
Q 004989 119 DVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDM 198 (720)
Q Consensus 119 ~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (720)
++..++.++.||+.||.|||+.||+||||||+|||++.++.++|+|||.+.......
T Consensus 125 ~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~nill~~~~~~kl~dfg~~~~~~~~~----------------------- 181 (290)
T cd05045 125 TMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEED----------------------- 181 (290)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheEEEcCCCcEEeccccccccccCcc-----------------------
Confidence 889999999999999999999999999999999999999999999998874321100
Q ss_pred hhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCccc
Q 004989 199 LQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYA 278 (720)
Q Consensus 199 ~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~ 278 (720)
+. . ......++..|+
T Consensus 182 ----------~~------------------------------------~-------------------~~~~~~~~~~y~ 196 (290)
T cd05045 182 ----------SY------------------------------------V-------------------KRSKGRIPVKWM 196 (290)
T ss_pred ----------ch------------------------------------h-------------------cccCCCCCcccc
Confidence 00 0 000023466899
Q ss_pred CcccccCCCCCccccchhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCC
Q 004989 279 SPEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK 354 (720)
Q Consensus 279 APE~l~~~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpt 354 (720)
|||.+.+..++.++|||||||++|||++ ||.+... ......+.....++..........+|+.+||.++|.+||+
T Consensus 197 apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~ 275 (290)
T cd05045 197 AIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAP-ERLFNLLKTGYRMERPENCSEEMYNLMLTCWKQEPDKRPT 275 (290)
T ss_pred CHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCH-HHHHHHHhCCCCCCCCCCCCHHHHHHHHHHccCCcccCCC
Confidence 9999988889999999999999999997 5654433 2334444433322222223345569999999999999999
Q ss_pred hHHHHc
Q 004989 355 MGELLQ 360 (720)
Q Consensus 355 a~eiL~ 360 (720)
+.+++.
T Consensus 276 ~~~i~~ 281 (290)
T cd05045 276 FADISK 281 (290)
T ss_pred HHHHHH
Confidence 999975
No 342
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=99.95 E-value=1.4e-27 Score=249.55 Aligned_cols=203 Identities=15% Similarity=0.191 Sum_probs=147.5
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC----CCCCHHHHHHHHHHHHHHHHHHHH
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK----RSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~----~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
.+|..++..++||||+++++ .+... ..+|++||| .+++|.++|.... ...++..++.++.||+.||.|||+
T Consensus 43 ~~e~~~~~~l~h~nii~~~~-~~~~~---~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~ 118 (269)
T cd05042 43 LQEVQPYRELNHPNVLQCLG-QCIES---IPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQ 118 (269)
T ss_pred HHHHHHHHhCCCCCcceEEE-EECCC---CceEEEEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHh
Confidence 36777888999999999999 44433 257999999 8999999995432 224678889999999999999999
Q ss_pred CCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCC
Q 004989 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||+||||||+|||++.++.+|++|||++....... .+
T Consensus 119 ~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~---------------------------------~~--------- 156 (269)
T cd05042 119 ADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPED---------------------------------YY--------- 156 (269)
T ss_pred cCEecccccHhheEecCCCcEEEeccccccccccch---------------------------------he---------
Confidence 999999999999999999999999998873221100 00
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC-------CCCCccc
Q 004989 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-------APVSCAS 292 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-------~~~s~~s 292 (720)
. ......+++.|+|||++.. ..++.++
T Consensus 157 ---------------------------~-------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~ 190 (269)
T cd05042 157 ---------------------------I-------------------TKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKS 190 (269)
T ss_pred ---------------------------e-------------------ccCCCCCcccccCHHHHhhccccccccccchhh
Confidence 0 0000245678999999743 3468899
Q ss_pred cchhhhchhhhccc----cCCCCchHHHHHHHhhcCC---CCccccccCchH-HHHHHHcCCCCCCCCCChHHHHc
Q 004989 293 DIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRV---LPPQLLLKFPKE-ASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 293 DIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~---~p~~~~~~~p~~-~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||||||++|||++ ||............+.... ..+.....++.. .+++..|+ .||++|||+++|++
T Consensus 191 DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~ 265 (269)
T cd05042 191 NIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPKPQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHE 265 (269)
T ss_pred HHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCCCcccccCCHHHHHHHHHHh-cCcccccCHHHHHH
Confidence 99999999999998 4555444332333333221 223333344444 47888888 59999999999975
No 343
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.95 E-value=1.1e-27 Score=254.17 Aligned_cols=209 Identities=18% Similarity=0.312 Sum_probs=162.4
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+++.++||||+++++ .+.... ..+++||| .+++|.+++... .+++..++.++.||+.||.|||+.|
T Consensus 63 ~~~~e~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~ql~~~l~~lH~~g 136 (292)
T cd06657 63 LLFNEVVIMRDYQHENVVEMYN-SYLVGD---ELWVVMEFLEGGALTDIVTHT--RMNEEQIAAVCLAVLKALSVLHAQG 136 (292)
T ss_pred HHHHHHHHHHhcCCcchhheee-EEEeCC---EEEEEEecCCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3446778999999999999999 554443 67999999 899999988443 3899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
++|+||+|+||+++.++.++++|||.+...... +
T Consensus 137 ivH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~-----------------------------------~----------- 170 (292)
T cd06657 137 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE-----------------------------------V----------- 170 (292)
T ss_pred eecCCCCHHHEEECCCCCEEEcccccceecccc-----------------------------------c-----------
Confidence 999999999999999999999999876321100 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
.......|++.|+|||.+.+..++.++|+|||||++
T Consensus 171 --------------------------------------------~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil 206 (292)
T cd06657 171 --------------------------------------------PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMV 206 (292)
T ss_pred --------------------------------------------ccccccccCccccCHHHhcCCCCCchhhHHHHHHHH
Confidence 000013578899999999887889999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCcc---ccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQ---LLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~---~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
|+|++ ||...... .....+... .++. .....+...+++.+||..+|.+||++.+++.||||.....
T Consensus 207 ~el~tg~~p~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~~~~~~~~~ 278 (292)
T cd06657 207 IEMVDGEPPYFNEPPL-KAMKMIRDN-LPPKLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGP 278 (292)
T ss_pred HHHHhCCCCCCCCCHH-HHHHHHHhh-CCcccCCcccCCHHHHHHHHHHHhCCcccCcCHHHHhcChHHhccCC
Confidence 99998 56544332 222233222 2222 2223455669999999999999999999999999998754
No 344
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=99.95 E-value=1.7e-27 Score=248.87 Aligned_cols=208 Identities=14% Similarity=0.171 Sum_probs=154.2
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+...|..++.+++||||+++++ ++..+. .++++||| .+++|.+++......+++.+++.++.|++.||.|||++|
T Consensus 51 ~~~~e~~~l~~l~h~ni~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g 126 (269)
T cd05065 51 DFLSEASIMGQFDHPNIIHLEG-VVTKSR---PVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMN 126 (269)
T ss_pred HHHHHHHHHHhCCCcCcceEEE-EECCCC---ceEEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3346778999999999999999 444433 57999999 889999999665566899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
++|+||||+||+++.++.++++|||.+......... ..+
T Consensus 127 ~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~------------------------------~~~----------- 165 (269)
T cd05065 127 YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSD------------------------------PTY----------- 165 (269)
T ss_pred EeecccChheEEEcCCCcEEECCCccccccccCccc------------------------------ccc-----------
Confidence 999999999999999999999998876432111000 000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
. .......+..|+|||.+.+..++.++|||||||++
T Consensus 166 -------------------------~-------------------~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l 201 (269)
T cd05065 166 -------------------------T-------------------SSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVM 201 (269)
T ss_pred -------------------------c-------------------cccCCCcceeecCHhHhccCcccchhhhhhhHHHH
Confidence 0 00001124579999999888899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||...... .....+......+......+...+++.+||..+|.+||++.+++.
T Consensus 202 ~e~l~~g~~p~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 263 (269)
T cd05065 202 WEVMSYGERPYWDMSNQ-DVINAIEQDYRLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVS 263 (269)
T ss_pred HHHhcCCCCCCCCCCHH-HHHHHHHcCCcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 99886 56544333 333333332222222222234459999999999999999999985
No 345
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=99.95 E-value=2e-27 Score=252.14 Aligned_cols=204 Identities=17% Similarity=0.187 Sum_probs=151.4
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC-----------CCCCHHHHHHHHHHHH
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-----------RSVDVYECLHIFRQIV 131 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~-----------~~l~~~~~~~i~~QIl 131 (720)
..+|..+|.+++||||+++++ ++.... ..+++||| .+++|.+++.... ..+++..++.++.||+
T Consensus 64 ~~~ei~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~ 139 (295)
T cd05097 64 FLKEIKIMSRLKNPNIIRLLG-VCVSDD---PLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIA 139 (295)
T ss_pred HHHHHHHHHhCCCCCcCeEEE-EEcCCC---ccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHH
Confidence 346777999999999999999 554443 57999999 8999999994321 2368889999999999
Q ss_pred HHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccc
Q 004989 132 EIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQ 211 (720)
Q Consensus 132 ~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfg 211 (720)
.||.|||++|++||||||+||+++.++.+||+|||++...... ..
T Consensus 140 ~al~~lH~~~i~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~----------------------------------~~- 184 (295)
T cd05097 140 SGMKYLASLNFVHRDLATRNCLVGNHYTIKIADFGMSRNLYSG----------------------------------DY- 184 (295)
T ss_pred HHHHHHHhcCeeccccChhhEEEcCCCcEEecccccccccccC----------------------------------cc-
Confidence 9999999999999999999999999999999999887332100 00
Q ss_pred cccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCcc
Q 004989 212 LVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCA 291 (720)
Q Consensus 212 la~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~ 291 (720)
.. ......++..|+|||++.+..++.+
T Consensus 185 -~~----------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~ 211 (295)
T cd05097 185 -YR----------------------------------------------------IQGRAVLPIRWMAWESILLGKFTTA 211 (295)
T ss_pred -ee----------------------------------------------------ccCcCcCceeecChhhhccCCcCch
Confidence 00 0001245778999999988889999
Q ss_pred ccchhhhchhhhccc-----cCCCCchHHHHHHHh----h---cCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHH
Q 004989 292 SDIYRLGVLLFELFC-----PFSTGEEKTRTMSSL----R---HRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELL 359 (720)
Q Consensus 292 sDIwSLGvll~eLlt-----pf~~~~~~~~~~~~l----~---~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL 359 (720)
+|||||||++|+|++ ||....... ....+ . ............+...+|+.+||..+|.+||++++|+
T Consensus 212 ~DvwSlG~~l~el~~~~~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~ 290 (295)
T cd05097 212 SDVWAFGVTLWEMFTLCKEQPYSLLSDEQ-VIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIH 290 (295)
T ss_pred hhHHHHHHHHHHHHHcCCCCCCcccChHH-HHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHH
Confidence 999999999999987 555433221 11111 1 1111111112234556999999999999999999997
Q ss_pred c
Q 004989 360 Q 360 (720)
Q Consensus 360 ~ 360 (720)
+
T Consensus 291 ~ 291 (295)
T cd05097 291 H 291 (295)
T ss_pred H
Confidence 5
No 346
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=99.95 E-value=1.9e-27 Score=248.12 Aligned_cols=205 Identities=15% Similarity=0.137 Sum_probs=152.5
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC------CCCCCCHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK------PKRSVDVYECLHIFRQIVEIVY 135 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~------~~~~l~~~~~~~i~~QIl~aL~ 135 (720)
+..+|..+|+.++||||+++++ ++.... ..+++||| .+++|.+++.. ....+++.+++.++.||+.||.
T Consensus 45 ~~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 120 (269)
T cd05044 45 EFLKEAHLMSNFNHPNIVKLLG-VCLLNE---PQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCV 120 (269)
T ss_pred HHHHHHHHHHhcCCCCeeeEee-eecCCC---CeEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHH
Confidence 3446778999999999999999 444433 57999999 89999999943 2234788999999999999999
Q ss_pred HHHHCCceeccCCCCcEEEccCC-----ceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhccccccc
Q 004989 136 AAHSQGIVVHNVRPSCFVMSSFN-----HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDL 210 (720)
Q Consensus 136 yLHs~gIvHrDLKP~NILl~~~~-----~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Df 210 (720)
|||+.+++|+||||+||+++.++ .++++|||++........ +
T Consensus 121 ~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~~~~~~~---------------------------------~ 167 (269)
T cd05044 121 YLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDY---------------------------------Y 167 (269)
T ss_pred HHHhCCcccCCCChheEEEecCCCCCCcceEECCcccccccccccc---------------------------------c
Confidence 99999999999999999999877 899988887743211000 0
Q ss_pred ccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCc
Q 004989 211 QLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSC 290 (720)
Q Consensus 211 gla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~ 290 (720)
.......++..|+|||.+.+..++.
T Consensus 168 -------------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~ 192 (269)
T cd05044 168 -------------------------------------------------------RKEGEGLLPVRWMAPESLLDGKFTT 192 (269)
T ss_pred -------------------------------------------------------ccCcccCCCccccCHHHHccCCccc
Confidence 0000023467899999999888999
Q ss_pred cccchhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 291 ASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 291 ~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
++|||||||++|||++ ||...... .....+.....+.......+...+|+.+||.++|.+||++.++++
T Consensus 193 ~~Dv~slG~il~ellt~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 265 (269)
T cd05044 193 QSDVWSFGVLMWEILTLGQQPYPALNNQ-EVLQHVTAGGRLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQE 265 (269)
T ss_pred chhHHHHHHHHHHHHHcCCCCCcccCHH-HHHHHHhcCCccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 9999999999999997 55543332 333333332222211222234459999999999999999999875
No 347
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.95 E-value=6.1e-28 Score=272.25 Aligned_cols=206 Identities=20% Similarity=0.238 Sum_probs=165.4
Q ss_pred chhhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC---------C----CCCCHHHHHH
Q 004989 60 FELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---------K----RSVDVYECLH 125 (720)
Q Consensus 60 ~~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~---------~----~~l~~~~~~~ 125 (720)
.....+||+.+|+.++|||||+|+|++.+.+ ++|+|+|| ..|||.+||+.. + .+++..+.++
T Consensus 532 ~~~dF~REaeLla~l~H~nIVrLlGVC~~~~----P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~ 607 (774)
T KOG1026|consen 532 ARQDFRREAELLAELQHPNIVRLLGVCREGD----PLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLH 607 (774)
T ss_pred HHHHHHHHHHHHHhccCCCeEEEEEEEccCC----eeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHH
Confidence 3444558888999999999999999544444 68999999 999999999421 1 2388999999
Q ss_pred HHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcc
Q 004989 126 IFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRL 205 (720)
Q Consensus 126 i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 205 (720)
|+.||+.|+.||-++.+|||||-..|+|+.++-.|||.|||++++.=.
T Consensus 608 iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~l~VKIsDfGLsRdiYs-------------------------------- 655 (774)
T KOG1026|consen 608 IATQIAAGMEYLSSHHFVHRDLATRNCLVGENLVVKISDFGLSRDIYS-------------------------------- 655 (774)
T ss_pred HHHHHHHHHHHHHhCcccccchhhhhceeccceEEEecccccchhhhh--------------------------------
Confidence 999999999999999999999999999999999999999999976311
Q ss_pred cccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC
Q 004989 206 RREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG 285 (720)
Q Consensus 206 ~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 285 (720)
+|+ .+.... -+=...|||||.+..
T Consensus 656 --sDY----------------------------------Yk~~~~--------------------t~lPIRWMppEsIly 679 (774)
T KOG1026|consen 656 --SDY----------------------------------YKVRGN--------------------TLLPIRWMPPESILY 679 (774)
T ss_pred --hhh----------------------------------hcccCC--------------------ceeeeecCCHHHhhc
Confidence 111 000000 012567999999999
Q ss_pred CCCCccccchhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchH-HHHHHHcCCCCCCCCCChHHHH
Q 004989 286 APVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKE-ASFCLWLLHPEPSGRPKMGELL 359 (720)
Q Consensus 286 ~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~-~~Li~~~L~~dP~~Rpta~eiL 359 (720)
++|+++|||||+||+|||+++ ||.+.... +.+..++.+.+-+.. ..+|.. .+||..||+.+|++||++.||-
T Consensus 680 ~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~-EVIe~i~~g~lL~~P-e~CP~~vY~LM~~CW~~~P~~RPsF~eI~ 756 (774)
T KOG1026|consen 680 GKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQ-EVIECIRAGQLLSCP-ENCPTEVYSLMLECWNENPKRRPSFKEIH 756 (774)
T ss_pred CcccchhhhhhhhhhhhhhhccccCcccccchH-HHHHHHHcCCcccCC-CCCCHHHHHHHHHHhhcCcccCCCHHHHH
Confidence 999999999999999999999 88776554 677778877764443 445555 4999999999999999999984
No 348
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.95 E-value=6.1e-28 Score=281.39 Aligned_cols=249 Identities=14% Similarity=0.195 Sum_probs=184.7
Q ss_pred CcccccccccCCcccccccccCCCCCC----------cccccccccCCCCccchhhchhhhhhcccCCCCCceeccccee
Q 004989 18 SSDSAWQDSDSSRALNISGVSDRNPRL----------LRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVC 87 (720)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~r~~~~~~~~~~~~~r~~~e~~~L~~l~HpnIV~l~~~~~ 87 (720)
+..-.|.+....+.+|.+.|+...-+. ..+.-..+....+.......-+|+.+|+.++|||||+++|+.+
T Consensus 686 lp~v~~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l 765 (1025)
T KOG1095|consen 686 LPEVPRKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCL 765 (1025)
T ss_pred cccCChhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeec
Confidence 334456677777888888777622111 1111111112222223334448999999999999999999555
Q ss_pred ecCCCCCcEEEEEec-CCCCHHHHHhCC------CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCce
Q 004989 88 ENEAAIDPFVHAIEW-GDVSLRQWLDKP------KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHV 160 (720)
Q Consensus 88 ~~~~~~~~~~lv~E~-~ggsL~~~L~~~------~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~v 160 (720)
... ..+|++|| .||+|..||++. ...++..+.+.++.||+.|+.||+++++|||||-..|+||+....|
T Consensus 766 ~~~----~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r~V 841 (1025)
T KOG1095|consen 766 DSG----PPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERRVV 841 (1025)
T ss_pred CCC----CcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccCcE
Confidence 422 56999999 999999999776 6668999999999999999999999999999999999999999999
Q ss_pred EEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCCCcccccccccc
Q 004989 161 SFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVE 240 (720)
Q Consensus 161 kliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~ 240 (720)
||.|||+|+|.-.. |+
T Consensus 842 KIaDFGlArDiy~~----------------------------------~y------------------------------ 857 (1025)
T KOG1095|consen 842 KIADFGLARDIYDK----------------------------------DY------------------------------ 857 (1025)
T ss_pred EEcccchhHhhhhc----------------------------------hh------------------------------
Confidence 99999999743111 00
Q ss_pred ccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhccc----cCCCCchHHH
Q 004989 241 GMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTR 316 (720)
Q Consensus 241 ~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~ 316 (720)
+...+ . .+-...|||||.+....++.++|||||||+|||+++ ||........
T Consensus 858 ------yr~~~---------~---------a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v 913 (1025)
T KOG1095|consen 858 ------YRKHG---------E---------AMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEV 913 (1025)
T ss_pred ------eeccC---------c---------cccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHH
Confidence 00000 0 011346999999999889999999999999999999 8888777655
Q ss_pred HHHHhhcCCCCccccccCchHH-HHHHHcCCCCCCCCCChHHHHc
Q 004989 317 TMSSLRHRVLPPQLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 317 ~~~~l~~~~~p~~~~~~~p~~~-~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
+...+..+.+++. ..+|+.. ++|..||+.+|++||++..|++
T Consensus 914 ~~~~~~ggRL~~P--~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~ 956 (1025)
T KOG1095|consen 914 LLDVLEGGRLDPP--SYCPEKLYQLMLQCWKHDPEDRPSFRTIVE 956 (1025)
T ss_pred HHHHHhCCccCCC--CCCChHHHHHHHHHccCChhhCccHHHHHh
Confidence 5445555544432 3555544 9999999999999999999987
No 349
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.95 E-value=9.9e-28 Score=267.98 Aligned_cols=211 Identities=17% Similarity=0.219 Sum_probs=157.9
Q ss_pred hchhhhhhccc-CCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCC---CHHHHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTH-GDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSV---DVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 63 r~~~e~~~L~~-l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l---~~~~~~~i~~QIl~aL~yLH 138 (720)
+..||+..|.. =.|||||++|+ .+......||..|.+..+|.+++......+ .....+.++.|++.||++||
T Consensus 548 ~A~rEi~lL~eSD~H~NviRyyc----~E~d~qF~YIalELC~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLH 623 (903)
T KOG1027|consen 548 FAQREIQLLQESDEHPNVIRYYC----SEQDRQFLYIALELCACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLH 623 (903)
T ss_pred HHHHHHHHHHhccCCCceEEEEe----eccCCceEEEEehHhhhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHH
Confidence 34477777776 45999999999 444445789999999999999996632111 11456889999999999999
Q ss_pred HCCceeccCCCCcEEEcc---C--CceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccc
Q 004989 139 SQGIVVHNVRPSCFVMSS---F--NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLV 213 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~~---~--~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla 213 (720)
+.+||||||||.||||+. + ..++|.|||+|+..+... ..|
T Consensus 624 sl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~--------------------------------sS~--- 668 (903)
T KOG1027|consen 624 SLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGK--------------------------------SSF--- 668 (903)
T ss_pred hcccccccCCCceEEEEccCCCcceeEEecccccccccCCCc--------------------------------chh---
Confidence 999999999999999985 2 357888888885532220 001
Q ss_pred cCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCcccc
Q 004989 214 TAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASD 293 (720)
Q Consensus 214 ~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sD 293 (720)
. +.....||.+|+|||++....-+.++|
T Consensus 669 -------------------~---------------------------------r~s~~sGt~GW~APE~L~~~~~~~avD 696 (903)
T KOG1027|consen 669 -------------------S---------------------------------RLSGGSGTSGWQAPEQLREDRKTQAVD 696 (903)
T ss_pred -------------------h---------------------------------cccCCCCcccccCHHHHhccccCcccc
Confidence 0 001146899999999999988888999
Q ss_pred chhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCc--hHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 294 IYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFP--KEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 294 IwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p--~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
||||||++|+.++ ||...- ....+|..+...-......+ ...+||.+||+++|..||+|.++|.||||-..
T Consensus 697 iFslGCvfyYvltgG~HpFGd~~---~R~~NIl~~~~~L~~L~~~~d~eA~dLI~~ml~~dP~~RPsa~~VL~HPlFW~~ 773 (903)
T KOG1027|consen 697 IFSLGCVFYYVLTGGSHPFGDSL---ERQANILTGNYTLVHLEPLPDCEAKDLISRMLNPDPQLRPSATDVLNHPLFWDS 773 (903)
T ss_pred hhhcCceEEEEecCCccCCCchH---HhhhhhhcCccceeeeccCchHHHHHHHHHhcCCCcccCCCHHHHhCCCccCCh
Confidence 9999999999999 665533 33334444443332222233 55699999999999999999999999999886
No 350
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.95 E-value=1.8e-27 Score=245.19 Aligned_cols=204 Identities=20% Similarity=0.257 Sum_probs=159.6
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+...|..++.+++||||+++++ .++.+. ..|++||| .+++|.+++.... .+++..+..++.||+.||.|||+.|
T Consensus 39 ~~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~~v~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lh~~~ 113 (250)
T cd05123 39 HTLTERNILSRINHPFIVKLHY-AFQTEE---KLYLVLEYAPGGELFSHLSKEG-RFSEERARFYAAEIVLALEYLHSLG 113 (250)
T ss_pred HHHHHHHHHHHcCCCcHHHHHH-HeecCC---eeEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 4456677899999999999998 444443 57999999 6999999995543 4899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
++|+||+|+||+++.++.++|+|||.+....... +
T Consensus 114 ~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~---------------------------------~------------ 148 (250)
T cd05123 114 IIYRDLKPENILLDADGHIKLTDFGLAKELSSEG---------------------------------S------------ 148 (250)
T ss_pred ceecCCCcceEEEcCCCcEEEeecCcceecccCC---------------------------------C------------
Confidence 9999999999999999999999998874321110 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......++..|+|||.+.+...+.++|+||||+++
T Consensus 149 ---------------------------------------------~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~ 183 (250)
T cd05123 149 ---------------------------------------------RTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLL 183 (250)
T ss_pred ---------------------------------------------cccCCcCCccccChHHhCCCCCCchhhHHHHHHHH
Confidence 00113568889999999888889999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCcccccc-CchHHHHHHHcCCCCCCCCCCh---HHHHcCccc
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLK-FPKEASFCLWLLHPEPSGRPKM---GELLQSEFL 364 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~-~p~~~~Li~~~L~~dP~~Rpta---~eiL~hp~~ 364 (720)
|+|++ ||...... .....+....+ .+... .....+|+.+||..||..||++ .++++||||
T Consensus 184 ~~l~~g~~p~~~~~~~-~~~~~~~~~~~--~~~~~~~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~~~~f 250 (250)
T cd05123 184 YEMLTGKPPFYAEDRK-EIYEKILKDPL--RFPEFLSPEARDLISGLLQKDPTKRLGSGGAEEIKAHPFF 250 (250)
T ss_pred HHHHHCCCCCCCCCHH-HHHHHHhcCCC--CCCCCCCHHHHHHHHHHhcCCHhhCCCcccHHHHHhCCCC
Confidence 99999 66544432 33333332211 12222 3445699999999999999999 999999998
No 351
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=99.95 E-value=1.5e-27 Score=254.23 Aligned_cols=203 Identities=16% Similarity=0.126 Sum_probs=154.6
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++..++||||+++++ ++... ..++++|| .+++|.+++......+++..+..++.||+.||.|||++||
T Consensus 56 ~~~e~~~~~~l~h~niv~~~~-~~~~~----~~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i 130 (303)
T cd05110 56 FMDEALIMASMDHPHLVRLLG-VCLSP----TIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRL 130 (303)
T ss_pred HHHHHHHHHhCCCCCcccEEE-EEcCC----CceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCe
Confidence 346778899999999999999 54433 24788999 8899999996655568999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.+||+|||.+......... +
T Consensus 131 vH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~--------------------------------~------------ 166 (303)
T cd05110 131 VHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKE--------------------------------Y------------ 166 (303)
T ss_pred eccccccceeeecCCCceEEccccccccccCcccc--------------------------------c------------
Confidence 99999999999999999999999887432110000 0
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......++..|+|||.+.+..++.++|||||||++|
T Consensus 167 --------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~ 202 (303)
T cd05110 167 --------------------------------------------NADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIW 202 (303)
T ss_pred --------------------------------------------ccCCCccccccCCHHHhccCCCChHHHHHHHHHHHH
Confidence 000023567899999998888999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 303 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
||++ ||...... .....+..+..++.......+..+++..||..+|++||++.++++
T Consensus 203 el~t~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~ 263 (303)
T cd05110 203 ELMTFGGKPYDGIPTR-EIPDLLEKGERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAA 263 (303)
T ss_pred HHHhCCCCCCCCCCHH-HHHHHHHCCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 9986 56543222 222333333333322233455669999999999999999999876
No 352
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=99.95 E-value=3.6e-27 Score=246.50 Aligned_cols=205 Identities=15% Similarity=0.190 Sum_probs=148.1
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC----CCCCCHHHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP----KRSVDVYECLHIFRQIVEIVYAA 137 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~----~~~l~~~~~~~i~~QIl~aL~yL 137 (720)
...+|..++.+++||||+++++ .+.... .+++|||| .+++|.++|... ...+++..++.++.||+.||.||
T Consensus 41 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~l 116 (269)
T cd05087 41 KFLEEAQPYRSLQHSNLLQCLG-QCTEVT---PYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHL 116 (269)
T ss_pred HHHHHHHHHHhCCCCCEeeEEE-EEcCCC---CcEEEEECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHH
Confidence 3446788999999999999999 444432 57999999 889999999432 12356778889999999999999
Q ss_pred HHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCC
Q 004989 138 HSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 138 Hs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~ 217 (720)
|+.|++||||||+||+++.++.++|+|||.+...... ++
T Consensus 117 H~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~----------------------------------~~------- 155 (269)
T cd05087 117 HKNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKE----------------------------------DY------- 155 (269)
T ss_pred HHCCEeccccCcceEEEcCCCcEEECCccccccccCc----------------------------------ce-------
Confidence 9999999999999999999999999999887321110 00
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC-------CCCc
Q 004989 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-------PVSC 290 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-------~~s~ 290 (720)
........|++.|+|||++.+. .++.
T Consensus 156 -----------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~ 188 (269)
T cd05087 156 -----------------------------------------------YVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTK 188 (269)
T ss_pred -----------------------------------------------eecCCCcCCcccccCHhHhccccccccccCCCc
Confidence 0000113567889999998643 2578
Q ss_pred cccchhhhchhhhccc----cCCCCchHHHHHHHhhc---CCCCcccccc-CchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 291 ASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRH---RVLPPQLLLK-FPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 291 ~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~---~~~p~~~~~~-~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
++|||||||++|||++ ||............+.. ....+.+... .+...+++..|+ .+|++|||++||+.
T Consensus 189 ~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~ 265 (269)
T cd05087 189 ESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHL 265 (269)
T ss_pred cchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCCccCCCCChHHHHHHHHHh-cCcccCCCHHHHHH
Confidence 9999999999999986 66554433222222221 1112222222 234458999998 68999999999974
No 353
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=99.95 E-value=2.4e-27 Score=246.47 Aligned_cols=202 Identities=14% Similarity=0.143 Sum_probs=153.8
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
..+|..++.+++||||+++++ ++... .++++||| .+++|.+++.. .+..+++.+++.++.||+.||.|||+.|
T Consensus 48 ~~~E~~~l~~l~h~~i~~~~~-~~~~~----~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ 122 (260)
T cd05067 48 FLAEANLMKQLQHPRLVRLYA-VVTQE----PIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKN 122 (260)
T ss_pred HHHHHHHHHhcCCcCeeeEEE-EEccC----CcEEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC
Confidence 346778999999999999998 44332 47999999 89999999843 3446899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
++||||||+||+++.++.++++|||.+.........
T Consensus 123 i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~-------------------------------------------- 158 (260)
T cd05067 123 YIHRDLRAANILVSETLCCKIADFGLARLIEDNEYT-------------------------------------------- 158 (260)
T ss_pred eecccccHHhEEEcCCCCEEEccCcceeecCCCCcc--------------------------------------------
Confidence 999999999999999999999998887332110000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......++..|+|||.+.+..++.++|||||||++
T Consensus 159 ---------------------------------------------~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l 193 (260)
T cd05067 159 ---------------------------------------------AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 193 (260)
T ss_pred ---------------------------------------------cccCCcccccccCHHHhccCCcCcccchHHHHHHH
Confidence 00002346789999999888899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||...... .....+.....++..........+|+.+||..+|++||++++++.
T Consensus 194 ~el~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05067 194 TEIVTYGRIPYPGMTNP-EVIQNLERGYRMPRPDNCPEELYELMRLCWKEKPEERPTFEYLRS 255 (260)
T ss_pred HHHHhCCCCCCCCCChH-HHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 99997 56544332 333333333222222222234569999999999999999999875
No 354
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=99.95 E-value=3.1e-27 Score=244.14 Aligned_cols=201 Identities=20% Similarity=0.272 Sum_probs=155.3
Q ss_pred hhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCC-CCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRS-VDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~-l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.|..+|..++||||+++++ ++... ..++++||| .+++|.+++...... +++..++.++.||+.||.|||+.|++
T Consensus 50 ~e~~~l~~l~~~~i~~~~~-~~~~~---~~~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~ 125 (258)
T smart00219 50 REARIMRKLDHPNIVKLLG-VCTEE---EPLMIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFI 125 (258)
T ss_pred HHHHHHHhcCCCchheEEE-EEcCC---CeeEEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCee
Confidence 5667888999999999999 44443 257999999 899999999554433 89999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
|+||||+||+++.++.++|+|||.+........ +
T Consensus 126 h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~---------------------------------~------------- 159 (258)
T smart00219 126 HRDLAARNCLVGENLVVKISDFGLSRDLYDDDY---------------------------------Y------------- 159 (258)
T ss_pred ecccccceEEEccCCeEEEcccCCceecccccc---------------------------------c-------------
Confidence 999999999999999999999998743211100 0
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......+++.|+|||.+.+..++.++|||||||++|+
T Consensus 160 -------------------------------------------~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~ 196 (258)
T smart00219 160 -------------------------------------------KKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWE 196 (258)
T ss_pred -------------------------------------------ccccCCCcccccChHHhccCCCCcchhHHHHHHHHHH
Confidence 0000125788999999987779999999999999999
Q ss_pred ccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 304 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 304 Llt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|++ ||... ........+.....++......+...+++.+||..+|++|||+.++++
T Consensus 197 l~~~g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 256 (258)
T smart00219 197 IFTLGESPYPGM-SNEEVLEYLKKGYRLPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVE 256 (258)
T ss_pred HHhCCCCCCCCC-CHHHHHHHHhcCCCCCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHh
Confidence 997 44432 333444444444443333333345569999999999999999999986
No 355
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=99.95 E-value=3.4e-27 Score=250.52 Aligned_cols=203 Identities=16% Similarity=0.159 Sum_probs=149.6
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC----------CCCCHHHHHHHHHHHHHH
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK----------RSVDVYECLHIFRQIVEI 133 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~----------~~l~~~~~~~i~~QIl~a 133 (720)
.+|..+|..++||||+++++ ++.... .++++||| .+++|.+++.... ..+++..+..++.||+.|
T Consensus 67 ~~E~~~l~~l~~~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a 142 (296)
T cd05095 67 LKEIKIMSRLKDPNIIRLLA-VCITSD---PLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASG 142 (296)
T ss_pred HHHHHHHHhCCCCCcceEEE-EEecCC---ccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHH
Confidence 36777899999999999999 454443 47999999 8899999995422 236778999999999999
Q ss_pred HHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccc
Q 004989 134 VYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLV 213 (720)
Q Consensus 134 L~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla 213 (720)
|+|||+.||+||||||+|||++.++.++|+|||.+....... .+
T Consensus 143 l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~---------------------------------~~--- 186 (296)
T cd05095 143 MKYLSSLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSGD---------------------------------YY--- 186 (296)
T ss_pred HHHHHHCCeecccCChheEEEcCCCCEEeccCcccccccCCc---------------------------------ce---
Confidence 999999999999999999999999999999988874321100 00
Q ss_pred cCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCcccc
Q 004989 214 TAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASD 293 (720)
Q Consensus 214 ~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sD 293 (720)
.......+++.|+|||...+..++.++|
T Consensus 187 ----------------------------------------------------~~~~~~~~~~~~~~pe~~~~~~~~~~~D 214 (296)
T cd05095 187 ----------------------------------------------------RIQGRAVLPIRWMSWESILLGKFTTASD 214 (296)
T ss_pred ----------------------------------------------------eccCcCcCccccCCHHHHhcCCccchhh
Confidence 0000023467899999988888999999
Q ss_pred chhhhchhhhccc-----cCCCCchHHHHHHHh-------hcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 294 IYRLGVLLFELFC-----PFSTGEEKTRTMSSL-------RHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 294 IwSLGvll~eLlt-----pf~~~~~~~~~~~~l-------~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
||||||++|||++ ||....... ..... ......+......+...+|+.+||+.||.+||++.+|++
T Consensus 215 iwSlG~~l~el~~~~~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~ 292 (296)
T cd05095 215 VWAFGVTLWEILTLCKEQPYSQLSDEQ-VIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHA 292 (296)
T ss_pred hhHHHHHHHHHHHhCCCCCccccChHH-HHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 9999999999996 554332221 11111 111111222222244559999999999999999999875
No 356
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=99.95 E-value=4e-28 Score=252.88 Aligned_cols=203 Identities=23% Similarity=0.274 Sum_probs=150.3
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..|...+.+++||||+++++ ++.... .+++|||| .+++|.++|... ...+++..+..|+.||+.||.|||+++|
T Consensus 49 ~~e~~~l~~l~h~ni~~~~g-~~~~~~---~~~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~i 124 (259)
T PF07714_consen 49 LNEIQILRKLRHPNIVKLYG-FCIENE---PLFLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNI 124 (259)
T ss_dssp HHHHHHHHTHSBTTBE-EEE-EEESSS---SEEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred eecccccccccccccccccc-cccccc---cccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 36777899999999999999 444332 48999999 889999999655 5569999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+|+||+|+||+++.++.+||+|||.+.........
T Consensus 125 iH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~--------------------------------------------- 159 (259)
T PF07714_consen 125 IHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKY--------------------------------------------- 159 (259)
T ss_dssp EEST-SGGGEEEETTTEEEEESTTTGEETTTSSSE---------------------------------------------
T ss_pred ccccccccccccccccccccccccccccccccccc---------------------------------------------
Confidence 99999999999999999999998887432110000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
. ......+...|+|||.+.+..++.++||||||+++|
T Consensus 160 -----------------------~--------------------~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ 196 (259)
T PF07714_consen 160 -----------------------K--------------------NDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLY 196 (259)
T ss_dssp -----------------------E--------------------ESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHH
T ss_pred -----------------------c--------------------cccccccccccccccccccccccccccccccccccc
Confidence 0 000023467899999998888999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 303 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
||++ ||...... .....+.....++..........+++..||+.+|.+||++.+|++
T Consensus 197 ei~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~ 257 (259)
T PF07714_consen 197 EILTLGKFPFSDYDNE-EIIEKLKQGQRLPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQ 257 (259)
T ss_dssp HHHTTSSGTTTTSCHH-HHHHHHHTTEETTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHH
T ss_pred cccccccccccccccc-cccccccccccceeccchhHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 9999 56555333 444455444333322223344559999999999999999999985
No 357
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=99.95 E-value=3e-27 Score=247.26 Aligned_cols=203 Identities=17% Similarity=0.214 Sum_probs=147.4
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC---CCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---KRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~---~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
.+|..+++.++||||+++++ .+.+.. ..|++||| .+++|.+++.+. ...+++..++.++.||+.||.|||+.
T Consensus 43 ~~e~~~~~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~ 118 (268)
T cd05086 43 LQQGDPYRILQHPNILQCLG-QCVEAI---PYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKH 118 (268)
T ss_pred HHHHHHHhccCCcchhheEE-EecCCC---ccEEEEecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC
Confidence 36667888999999999999 554443 57999999 889999999542 23467778899999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
+|+||||||+|||++.++.++|+|||.+...... ++
T Consensus 119 ~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~----------------------------------~~---------- 154 (268)
T cd05086 119 NFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKE----------------------------------DY---------- 154 (268)
T ss_pred CeeccCCccceEEEcCCccEEecccccccccCcc----------------------------------hh----------
Confidence 9999999999999999999999998876221000 00
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC-------CCCCcccc
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-------APVSCASD 293 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-------~~~s~~sD 293 (720)
........|+..|+|||++.. ..++.++|
T Consensus 155 --------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~D 190 (268)
T cd05086 155 --------------------------------------------IETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSN 190 (268)
T ss_pred --------------------------------------------hhcccCCcCcccccCchhcccccCccccCCCCCcch
Confidence 000001357889999999853 23578999
Q ss_pred chhhhchhhhccc----cCCCCchHHHHHHHhhcC---CCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 294 IYRLGVLLFELFC----PFSTGEEKTRTMSSLRHR---VLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 294 IwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~---~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
||||||++|||++ ||............+... .+.+.+...+ +...+++..|| .+|.+||++.++++
T Consensus 191 iwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~ 264 (268)
T cd05086 191 VWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQLELPYSERWYEVLQFCW-LSPEKRATAEEVHR 264 (268)
T ss_pred hHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHH
Confidence 9999999999986 565544432222222221 1223333333 34458999999 67999999999975
No 358
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.95 E-value=2.2e-27 Score=256.69 Aligned_cols=204 Identities=17% Similarity=0.173 Sum_probs=153.7
Q ss_pred chhhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC---------------CCCCCHHHHHHH
Q 004989 64 KHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---------------KRSVDVYECLHI 126 (720)
Q Consensus 64 ~~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~---------------~~~l~~~~~~~i 126 (720)
..+|..++.++ +||||+++++ ++.... .++++||| .+++|.++|.+. ...++...++.+
T Consensus 64 ~~~E~~~l~~l~~h~~iv~~~~-~~~~~~---~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 139 (334)
T cd05100 64 LVSEMEMMKMIGKHKNIINLLG-ACTQDG---PLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSC 139 (334)
T ss_pred HHHHHHHHHhhcCCCCeeeeeE-EEccCC---ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHH
Confidence 34677788888 8999999999 444432 57999999 899999999532 224788899999
Q ss_pred HHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhccc
Q 004989 127 FRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLR 206 (720)
Q Consensus 127 ~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 206 (720)
+.||+.||.|||++||+||||||+|||++.++.++|+|||.++.......
T Consensus 140 ~~qi~~al~~LH~~givH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~------------------------------ 189 (334)
T cd05100 140 AYQVARGMEYLASQKCIHRDLAARNVLVTEDNVMKIADFGLARDVHNIDY------------------------------ 189 (334)
T ss_pred HHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCcccceecccccc------------------------------
Confidence 99999999999999999999999999999999999999988743211100
Q ss_pred ccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC
Q 004989 207 REDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA 286 (720)
Q Consensus 207 l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 286 (720)
+. ......++..|+|||++.+.
T Consensus 190 ---~~-------------------------------------------------------~~~~~~~~~~y~aPE~~~~~ 211 (334)
T cd05100 190 ---YK-------------------------------------------------------KTTNGRLPVKWMAPEALFDR 211 (334)
T ss_pred ---cc-------------------------------------------------------cccCCCcCceEcCHHHhccC
Confidence 00 00001345679999999888
Q ss_pred CCCccccchhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 287 PVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 287 ~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
.++.++|||||||++|||++ ||.... .......+.....++..........+|+.+||+.+|.+||++.|+++
T Consensus 212 ~~~~~~Di~slG~il~el~~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~ 288 (334)
T cd05100 212 VYTHQSDVWSFGVLLWEIFTLGGSPYPGIP-VEELFKLLKEGHRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVE 288 (334)
T ss_pred CcCchhhhHHHHHHHHHHHhcCCCCCCCCC-HHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence 89999999999999999987 454433 23344444433333332233345569999999999999999999986
No 359
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.95 E-value=9.9e-28 Score=251.15 Aligned_cols=220 Identities=20% Similarity=0.258 Sum_probs=159.8
Q ss_pred hhhhhcccCC-CCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 66 SDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~L~~l~-HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
+|..++.++. ||||+++++ ++.... .++++||| .+++|.+++.+.+ .+++..++.++.||+.||.|||+.|++
T Consensus 50 ~e~~~~~~l~~~~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~i~~ql~~~l~~Lh~~~~~ 124 (280)
T cd05581 50 IEKEVLTRLNGHPGIIKLYY-TFQDEE---NLYFVLEYAPNGELLQYIRKYG-SLDEKCTRFYAAEILLALEYLHSKGII 124 (280)
T ss_pred HHHHHHHhcccCCCchhHHH-HhcCCc---eEEEEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 5666788888 999999999 444433 57999999 7999999996554 599999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
|+||+|+||+++.++.++++|||.+...+........... . ..++..
T Consensus 125 H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~~~~~~~--------------~--------~~~~~~----------- 171 (280)
T cd05581 125 HRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGD--------------A--------TNIDSQ----------- 171 (280)
T ss_pred ecCCCHHHeEECCCCCEEecCCccccccCCccccccCCCC--------------C--------cccccc-----------
Confidence 9999999999999999999999988654332111000000 0 000000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
............|+..|+|||.+.+..++.++|||||||++|+
T Consensus 172 -------------------------------------~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~ 214 (280)
T cd05581 172 -------------------------------------IEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQ 214 (280)
T ss_pred -------------------------------------ccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHH
Confidence 0000001112467899999999988889999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhc--CCCCccccccCchHHHHHHHcCCCCCCCCCCh----HHHHcCccc
Q 004989 304 LFC---PFSTGEEKTRTMSSLRH--RVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM----GELLQSEFL 364 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~--~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta----~eiL~hp~~ 364 (720)
|++ ||...... .....+.. ..+|+. ..+...+|+.+||+.+|.+||++ .++++||||
T Consensus 215 l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~---~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~~~ 280 (280)
T cd05581 215 MLTGKPPFRGSNEY-LTFQKILKLEYSFPPN---FPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPFF 280 (280)
T ss_pred HHhCCCCCCCccHH-HHHHHHHhcCCCCCCc---cCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcCCCC
Confidence 999 55444332 22222222 112222 12445699999999999999999 999999997
No 360
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=99.95 E-value=3.6e-27 Score=247.83 Aligned_cols=205 Identities=19% Similarity=0.198 Sum_probs=154.3
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC-------CCCCHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-------RSVDVYECLHIFRQIVEIV 134 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~-------~~l~~~~~~~i~~QIl~aL 134 (720)
+..+|..++..++||||+++++.++... ...++++|| .+++|.+++.... ..+++..++.++.||+.||
T Consensus 54 ~~~~e~~~l~~l~h~ni~~~~~~~~~~~---~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l 130 (280)
T cd05043 54 LLLQESCLLYGLSHQNILPILHVCIEDG---EPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGM 130 (280)
T ss_pred HHHHHHHHHHhCCCCCCCeEEEEEecCC---CCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHH
Confidence 3447778899999999999999433332 246899999 8899999994421 4589999999999999999
Q ss_pred HHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhccccccccccc
Q 004989 135 YAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVT 214 (720)
Q Consensus 135 ~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~ 214 (720)
.|||++|++||||||+||+++.++.+|++|||+++..... ++..
T Consensus 131 ~~LH~~~i~H~di~p~nil~~~~~~~kl~d~g~~~~~~~~----------------------------------~~~~-- 174 (280)
T cd05043 131 SYLHKRGVIHKDIAARNCVIDEELQVKITDNALSRDLFPM----------------------------------DYHC-- 174 (280)
T ss_pred HHHHHCCEeecccCHhhEEEcCCCcEEECCCCCcccccCC----------------------------------ceEE--
Confidence 9999999999999999999999999999999887432111 0000
Q ss_pred CCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccc
Q 004989 215 APTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDI 294 (720)
Q Consensus 215 ~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDI 294 (720)
. .....++..|+|||.+.+..++.++||
T Consensus 175 --------------------------------~--------------------~~~~~~~~~y~apE~~~~~~~~~~~Di 202 (280)
T cd05043 175 --------------------------------L--------------------GDNENRPVKWMALESLVNKEYSSASDV 202 (280)
T ss_pred --------------------------------e--------------------CCCCCcchhccCHHHHhcCCCCchhhH
Confidence 0 000134667999999988889999999
Q ss_pred hhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 295 YRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 295 wSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||||++|||++ ||...... .....+.....++. ....| ...+++.+||.++|++|||+.++++
T Consensus 203 ~slG~~l~el~~~g~~p~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 271 (280)
T cd05043 203 WSFGVLLWELMTLGQTPYVEIDPF-EMAAYLKDGYRLAQ-PINCPDELFAVMACCWALDPEERPSFSQLVQ 271 (280)
T ss_pred HHhHHHHHHHhcCCCCCcCcCCHH-HHHHHHHcCCCCCC-CCcCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 999999999997 56544332 33333333322222 22333 4569999999999999999999985
No 361
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=99.95 E-value=2.4e-27 Score=248.36 Aligned_cols=204 Identities=18% Similarity=0.222 Sum_probs=154.8
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC--------CCCCHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK--------RSVDVYECLHIFRQIVEI 133 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~--------~~l~~~~~~~i~~QIl~a 133 (720)
+..+|..+|.+++||||+++++ ++.+.. ..|++||| .+++|.+++.... ..+++..++.++.||+.|
T Consensus 54 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~ 129 (275)
T cd05046 54 EFRRELDMFRKLSHKNVVRLLG-LCREAE---PHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALG 129 (275)
T ss_pred HHHHHHHHHHhcCCcceeeeEE-EECCCC---cceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHH
Confidence 3446788999999999999999 554433 56999999 8899999994432 158999999999999999
Q ss_pred HHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccc
Q 004989 134 VYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLV 213 (720)
Q Consensus 134 L~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla 213 (720)
|.|||+.||+||||||+||+++.++.++++|||.+...... .+
T Consensus 130 l~~LH~~~i~H~dlkp~Nili~~~~~~~l~~~~~~~~~~~~----------------------------------~~--- 172 (275)
T cd05046 130 MDHLSNARFVHRDLAARNCLVSSQREVKVSLLSLSKDVYNS----------------------------------EY--- 172 (275)
T ss_pred HHHhhhcCcccCcCccceEEEeCCCcEEEcccccccccCcc----------------------------------cc---
Confidence 99999999999999999999999999999888876321100 00
Q ss_pred cCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCcccc
Q 004989 214 TAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASD 293 (720)
Q Consensus 214 ~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sD 293 (720)
. ......++..|+|||.+.+..++.++|
T Consensus 173 -----------~-----------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~D 200 (275)
T cd05046 173 -----------Y-----------------------------------------KLRNALIPLRWLAPEAVQEDDFSTKSD 200 (275)
T ss_pred -----------c-----------------------------------------ccCCceeEEeecChhhhccCCCCchhh
Confidence 0 000124567799999998888899999
Q ss_pred chhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCch-HHHHHHHcCCCCCCCCCChHHHHc
Q 004989 294 IYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 294 IwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~-~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
||||||++|+|++ ||...... .....+.....+.......|. ..+++.+||..+|.+||++.+++.
T Consensus 201 i~slG~~l~~l~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~ 271 (275)
T cd05046 201 VWSFGVLMWEVFTQGELPFYGLSDE-EVLNRLQAGKLELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVS 271 (275)
T ss_pred HHHHHHHHHHHHhCCCCCccccchH-HHHHHHHcCCcCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 9999999999997 56443332 333344433332222233444 459999999999999999999986
No 362
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=99.95 E-value=4e-27 Score=247.51 Aligned_cols=204 Identities=14% Similarity=0.101 Sum_probs=157.0
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++..++||||+++++ ++.. ...+++||| .+++|.+++......+++..+..++.||+.||+|||++|
T Consensus 55 ~~~~e~~~l~~l~h~~i~~~~~-~~~~----~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ 129 (279)
T cd05057 55 EILDEAYVMASVDHPHVVRLLG-ICLS----SQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKR 129 (279)
T ss_pred HHHHHHHHHHhCCCCCcceEEE-EEec----CceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 4447888999999999999999 5544 257999999 899999999765556999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.++|+|||.++....... -+
T Consensus 130 i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~~--------------------------------~~----------- 166 (279)
T cd05057 130 LVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEK--------------------------------EY----------- 166 (279)
T ss_pred EEecccCcceEEEcCCCeEEECCCcccccccCccc--------------------------------ce-----------
Confidence 99999999999999999999999988743211100 00
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......++..|+|||.+....++.++|||||||++
T Consensus 167 ---------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l 201 (279)
T cd05057 167 ---------------------------------------------HAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTV 201 (279)
T ss_pred ---------------------------------------------ecCCCcccccccCHHHhhcCCcCchhhHHHHHHHH
Confidence 00001235679999999888899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||...... .....+......+..........+++.+||..+|..||++.++++
T Consensus 202 ~el~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~ 263 (279)
T cd05057 202 WELMTFGAKPYEGIPAV-EIPDLLEKGERLPQPPICTIDVYMVLVKCWMIDAESRPTFKELIN 263 (279)
T ss_pred HHHhcCCCCCCCCCCHH-HHHHHHhCCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 99997 55444332 333344433333332333455669999999999999999999875
No 363
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.95 E-value=3.4e-27 Score=247.58 Aligned_cols=206 Identities=20% Similarity=0.266 Sum_probs=155.1
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCcee
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
..|..++..++||||+++++ ++... ..++++|||.+++|.+++.+....+++..++.++.||+.||.|||++||+|
T Consensus 46 ~~e~~~l~~~~~~~i~~~~~-~~~~~---~~~~~v~e~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H 121 (282)
T cd07829 46 LREISLLKELKHPNIVKLLD-VIHTE---RKLYLVFEYCDMDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILH 121 (282)
T ss_pred HHHHHHHHhcCCCCHHHHHh-hhhcC---CceEEEecCcCcCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 36777899999999999999 44443 367999999667999999665456999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccc
Q 004989 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||+|+||+++.++.++|+|||.+........ .+
T Consensus 122 ~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~--------------------------------~~-------------- 155 (282)
T cd07829 122 RDLKPQNILINRDGVLKLADFGLARAFGIPLR--------------------------------TY-------------- 155 (282)
T ss_pred CCCChheEEEcCCCCEEEecCCcccccCCCcc--------------------------------cc--------------
Confidence 99999999999999999999988743211100 00
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC-CCCccccchhhhchhhh
Q 004989 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFE 303 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGvll~e 303 (720)
....++..|+|||.+.+. .++.++|||||||++||
T Consensus 156 --------------------------------------------~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~ 191 (282)
T cd07829 156 --------------------------------------------THEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAE 191 (282)
T ss_pred --------------------------------------------CccccCcCcCChHHhcCCcCCCccccHHHHHHHHHH
Confidence 002457789999999776 68999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhh-------------------cCCCCc--------cccccCchHHHHHHHcCCCCCCCCC
Q 004989 304 LFC---PFSTGEEKTRTMSSLR-------------------HRVLPP--------QLLLKFPKEASFCLWLLHPEPSGRP 353 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~-------------------~~~~p~--------~~~~~~p~~~~Li~~~L~~dP~~Rp 353 (720)
|++ ||.............. ...++. .+....+...+|+.+||..+|++||
T Consensus 192 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp 271 (282)
T cd07829 192 MITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRI 271 (282)
T ss_pred HHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCC
Confidence 999 4544322211111100 001110 0111223456999999999999999
Q ss_pred ChHHHHcCccc
Q 004989 354 KMGELLQSEFL 364 (720)
Q Consensus 354 ta~eiL~hp~~ 364 (720)
++.+++.||||
T Consensus 272 ~~~~~l~~p~~ 282 (282)
T cd07829 272 SAKEALKHPYF 282 (282)
T ss_pred CHHHHhhCcCC
Confidence 99999999997
No 364
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.95 E-value=3.1e-27 Score=249.86 Aligned_cols=210 Identities=17% Similarity=0.218 Sum_probs=157.6
Q ss_pred chhhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 64 KHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 64 ~~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
...|..+|.++ +||||+++++ +++.+. .+|++||| .+++|.+++... ..+++..+..++.||+.||.|||+.|
T Consensus 51 ~~~e~~~l~~l~~~~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~al~~lH~~~ 125 (290)
T cd05613 51 TRTERQVLEHIRQSPFLVTLHY-AFQTDT---KLHLILDYINGGELFTHLSQR-ERFKEQEVQIYSGEIVLALEHLHKLG 125 (290)
T ss_pred HHHHHHHHHhcccCCChhceee-EeecCC---eEEEEEecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 34677788888 5999999998 555443 57999999 899999999554 34899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
++||||||+|||++.++.++|+|||++.........
T Consensus 126 i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~-------------------------------------------- 161 (290)
T cd05613 126 IIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDEVE-------------------------------------------- 161 (290)
T ss_pred eeccCCCHHHeEECCCCCEEEeeCccceeccccccc--------------------------------------------
Confidence 999999999999999999999999887432111000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC--CCCccccchhhhc
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA--PVSCASDIYRLGV 299 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~--~~s~~sDIwSLGv 299 (720)
......|+..|+|||.+.+. .++.++|||||||
T Consensus 162 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~ 196 (290)
T cd05613 162 ---------------------------------------------RAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGV 196 (290)
T ss_pred ---------------------------------------------ccccccCCcccCChhhccCCCCCCCccccHHHHHH
Confidence 00013578899999998754 3788999999999
Q ss_pred hhhhccc---cCCCCc---hHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCCc
Q 004989 300 LLFELFC---PFSTGE---EKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEPR 368 (720)
Q Consensus 300 ll~eLlt---pf~~~~---~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~~ 368 (720)
++|+|++ ||.... ........+.... ++......+...+|+.+||..+|++|| ++.+++.||||....
T Consensus 197 ~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~ 275 (290)
T cd05613 197 LMYELLTGASPFTVDGEKNSQAEISRRILKSE-PPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQKIN 275 (290)
T ss_pred HHHHHhcCCCCCCcCCccccHHHHHHHhhccC-CCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCcccccCC
Confidence 9999999 453211 1112222222221 221122334456999999999999997 899999999998864
No 365
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=4.9e-28 Score=250.52 Aligned_cols=218 Identities=21% Similarity=0.300 Sum_probs=172.7
Q ss_pred hhccc-CCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceecc
Q 004989 69 VELTH-GDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 146 (720)
Q Consensus 69 ~~L~~-l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrD 146 (720)
.+|+- -+-|.++++.. +|+.-+ .+|+|||| .||+|.-.|.+-++ +.+..+..|+..|+-||-|||++|||.||
T Consensus 401 rvLAL~~kppFL~qlHS-cFQTmD---RLyFVMEyvnGGDLMyhiQQ~Gk-FKEp~AvFYAaEiaigLFFLh~kgIiYRD 475 (683)
T KOG0696|consen 401 RVLALPGKPPFLVQLHS-CFQTMD---RLYFVMEYVNGGDLMYHIQQVGK-FKEPVAVFYAAEIAIGLFFLHSKGIIYRD 475 (683)
T ss_pred hheecCCCCchHHHHHH-Hhhhhh---heeeEEEEecCchhhhHHHHhcc-cCCchhhhhhHHHHHHhhhhhcCCeeeee
Confidence 34544 34677788887 565544 57999999 99999988866665 99999999999999999999999999999
Q ss_pred CCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccc
Q 004989 147 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 226 (720)
Q Consensus 147 LKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~ 226 (720)
||.+||||+.+|++||+|||+|+.--.+ -
T Consensus 476 LKLDNvmLd~eGHiKi~DFGmcKEni~~-------------------------------------~-------------- 504 (683)
T KOG0696|consen 476 LKLDNVMLDSEGHIKIADFGMCKENIFD-------------------------------------G-------------- 504 (683)
T ss_pred ccccceEeccCCceEeeecccccccccC-------------------------------------C--------------
Confidence 9999999999999999999998432111 0
Q ss_pred cCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhccc
Q 004989 227 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC 306 (720)
Q Consensus 227 q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt 306 (720)
.+....+|||.|+|||++...+|+.++|+||+||+|||||.
T Consensus 505 ---------------------------------------~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmla 545 (683)
T KOG0696|consen 505 ---------------------------------------VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLA 545 (683)
T ss_pred ---------------------------------------cceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHc
Confidence 00112689999999999999999999999999999999999
Q ss_pred ---cCCCCchHHHHHHHhhcCCCCccccccCchHH-HHHHHcCCCCCCCCCC-----hHHHHcCcccCCC-ccchHHHHH
Q 004989 307 ---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEA-SFCLWLLHPEPSGRPK-----MGELLQSEFLNEP-RDSMEEREA 376 (720)
Q Consensus 307 ---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~-~Li~~~L~~dP~~Rpt-----a~eiL~hp~~~~~-~~~l~e~~~ 376 (720)
||.+.++.........+....|. ..++++ ++|..+|.+.|.+|.. -.+|-.||||+.. ++.++.++.
T Consensus 546 GQpPFdGeDE~elF~aI~ehnvsyPK---slSkEAv~ickg~ltK~P~kRLGcg~~ge~di~~H~FFR~iDWek~E~~ei 622 (683)
T KOG0696|consen 546 GQPPFDGEDEDELFQAIMEHNVSYPK---SLSKEAVAICKGLLTKHPGKRLGCGPEGERDIREHPFFRRIDWEKLERREI 622 (683)
T ss_pred CCCCCCCCCHHHHHHHHHHccCcCcc---cccHHHHHHHHHHhhcCCccccCCCCccccchhhCcchhhccHHHHhhccC
Confidence 88888776544444444443322 335555 9999999999999963 4678899999977 667777776
Q ss_pred HHHHhhhh
Q 004989 377 AIELREQI 384 (720)
Q Consensus 377 ~~~~~e~~ 384 (720)
++++.+..
T Consensus 623 qPPfkPk~ 630 (683)
T KOG0696|consen 623 QPPFKPKI 630 (683)
T ss_pred CCCCCCcc
Confidence 66666655
No 366
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=99.95 E-value=4e-27 Score=244.55 Aligned_cols=203 Identities=14% Similarity=0.151 Sum_probs=154.6
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
..+|..++++++||||+++++ ++.... ..+++||| .+++|.+++... +..+++..++.++.||+.||.|||++|
T Consensus 48 ~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~ 123 (261)
T cd05034 48 FLQEAQIMKKLRHDKLVQLYA-VCSEEE---PIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRN 123 (261)
T ss_pred HHHHHHHHhhCCCCCEeeeee-eeecCC---ceEEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 346778999999999999999 444432 57999999 899999999543 346899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+|+||||+||+++.++.++++|||.+...+.....
T Consensus 124 i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~-------------------------------------------- 159 (261)
T cd05034 124 YIHRDLAARNILVGENLVCKIADFGLARLIEDDEYT-------------------------------------------- 159 (261)
T ss_pred cccCCcchheEEEcCCCCEEECccccceeccchhhh--------------------------------------------
Confidence 999999999999999999999999887432111000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......++..|+|||.+.+..++.++|||||||++
T Consensus 160 ---------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il 194 (261)
T cd05034 160 ---------------------------------------------AREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILL 194 (261)
T ss_pred ---------------------------------------------hhhccCCCccccCHHHhccCCcCchhHHHHHHHHH
Confidence 00001235679999999988899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|+|++ ||...... .....+......+......+...+++.+||..+|.+||+++++++
T Consensus 195 ~~l~t~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~ 256 (261)
T cd05034 195 TEIVTYGRVPYPGMTNR-EVLEQVERGYRMPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQS 256 (261)
T ss_pred HHHHhCCCCCCCCCCHH-HHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 99997 56544332 333444333222222222344569999999999999999999874
No 367
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=99.94 E-value=7.6e-27 Score=242.84 Aligned_cols=201 Identities=13% Similarity=0.137 Sum_probs=152.6
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
.+|..+++.++|+||+++++ ++.. ..++++||| .+++|.+++.+ ....++...++.++.||+.||.|||+.|+
T Consensus 49 ~~e~~~l~~l~~~~i~~~~~-~~~~----~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i 123 (260)
T cd05073 49 LAEANVMKTLQHDKLVKLHA-VVTK----EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNY 123 (260)
T ss_pred HHHHHHHHhcCCCCcceEEE-EEcC----CCeEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 35677899999999999999 4433 257999999 78999999954 34457889999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+|+||||+||+++..+.++|+|||.+.........
T Consensus 124 ~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~--------------------------------------------- 158 (260)
T cd05073 124 IHRDLRAANILVSASLVCKIADFGLARVIEDNEYT--------------------------------------------- 158 (260)
T ss_pred cccccCcceEEEcCCCcEEECCCcceeeccCCCcc---------------------------------------------
Confidence 99999999999999999999988877332110000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......++..|+|||++.+..++.++|||||||++|
T Consensus 159 --------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~ 194 (260)
T cd05073 159 --------------------------------------------AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLM 194 (260)
T ss_pred --------------------------------------------cccCCcccccccCHhHhccCCcCccccchHHHHHHH
Confidence 000023466799999998888999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 303 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
+|++ ||...... .....+......+..........+++.+||+++|++||++.+++.
T Consensus 195 ~l~t~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05073 195 EIVTYGRIPYPGMSNP-EVIRALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQS 255 (260)
T ss_pred HHHhcCCCCCCCCCHH-HHHHHHhCCCCCCCcccCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 9998 56544332 333344433322222223334559999999999999999998864
No 368
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.94 E-value=2.6e-28 Score=240.74 Aligned_cols=229 Identities=17% Similarity=0.186 Sum_probs=173.7
Q ss_pred CCcccccccccCCCCccchhhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHh----CCCCCC
Q 004989 43 RLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLD----KPKRSV 118 (720)
Q Consensus 43 ~~~~~~r~~~~~~~~~~~~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~----~~~~~l 118 (720)
..-+++||...-...+..+++.+-|. +++.-+.||||++||+.|..++ +|+.||++..+|..+.+ -....+
T Consensus 90 ~~mAVKrIr~~n~~keq~rll~e~d~-~mks~~cp~IVkfyGa~F~EGd----cWiCMELMd~SlDklYk~vy~vq~~~i 164 (361)
T KOG1006|consen 90 KLMAVKRIRSNNIEKEQKRLLMEHDT-VMKSSNCPNIVKFYGALFSEGD----CWICMELMDISLDKLYKRVYSVQKSRI 164 (361)
T ss_pred cEEEEEEeeeccchHHHHHHHHHHHH-HHhhcCCcHHHHHhhhhhcCCc----eeeeHHHHhhhHHHHHHHHHHHHhccC
Confidence 34577788777776666777777665 4555689999999998886664 79999999889877652 123448
Q ss_pred CHHHHHHHHHHHHHHHHHHHH-CCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchh
Q 004989 119 DVYECLHIFRQIVEIVYAAHS-QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLD 197 (720)
Q Consensus 119 ~~~~~~~i~~QIl~aL~yLHs-~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (720)
+|...-+|..-.+.||+||-. ..|||||+||+|||++..|.|||||||.|-+.-
T Consensus 165 pE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv------------------------- 219 (361)
T KOG1006|consen 165 PENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLV------------------------- 219 (361)
T ss_pred cHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccchHhHH-------------------------
Confidence 999999999999999999996 689999999999999999999999999982210
Q ss_pred hhhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcc
Q 004989 198 MLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWY 277 (720)
Q Consensus 198 ~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y 277 (720)
|- . ..+.-.|...|
T Consensus 220 -----------~S-i------------------------------------------------------AkT~daGCrpY 233 (361)
T KOG1006|consen 220 -----------DS-I------------------------------------------------------AKTVDAGCRPY 233 (361)
T ss_pred -----------HH-H------------------------------------------------------HhhhccCCccc
Confidence 00 0 01113678899
Q ss_pred cCcccccCC--CCCccccchhhhchhhhccc---cCCCCchHHHHHHHhhcCCCCcccc-----ccCchHHHHHHHcCCC
Q 004989 278 ASPEELAGA--PVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLL-----LKFPKEASFCLWLLHP 347 (720)
Q Consensus 278 ~APE~l~~~--~~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~-----~~~p~~~~Li~~~L~~ 347 (720)
||||-+... .|+-+||+||||++|||+.| ||..++...+....+..+.+|.-.. ....+...||.-||.+
T Consensus 234 mAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~gdpp~l~~~~~~~~~s~~~~~fintCl~K 313 (361)
T KOG1006|consen 234 MAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVIGDPPILLFDKECVHYSFSMVRFINTCLIK 313 (361)
T ss_pred cChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHcCCCCeecCcccccccCHHHHHHHHHHhhc
Confidence 999999543 38999999999999999999 5555544444333343443332211 1334556999999999
Q ss_pred CCCCCCChHHHHcCcccCCC
Q 004989 348 EPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 348 dP~~Rpta~eiL~hp~~~~~ 367 (720)
|-+.||...+++.+||+...
T Consensus 314 d~~~Rpky~~Lk~~~fyr~y 333 (361)
T KOG1006|consen 314 DRSDRPKYDDLKKFPFYRMY 333 (361)
T ss_pred ccccCcchhhhhcCchhhhh
Confidence 99999999999999999876
No 369
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=99.94 E-value=7.6e-27 Score=258.52 Aligned_cols=205 Identities=15% Similarity=0.176 Sum_probs=154.9
Q ss_pred chhhhhhcccCC-CCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC--------------------------
Q 004989 64 KHSDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-------------------------- 115 (720)
Q Consensus 64 ~~~e~~~L~~l~-HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~-------------------------- 115 (720)
..+|..+|.++. |||||++++ .+.... .+++|||| .+++|.++|.+..
T Consensus 87 ~~~E~~~l~~l~~H~niv~~~~-~~~~~~---~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (401)
T cd05107 87 LMSELKIMSHLGPHLNIVNLLG-ACTKGG---PIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLS 162 (401)
T ss_pred HHHHHHHHHhcCCCCCeEEEEE-EEccCC---CcEEEEeccCCCcHHHHHHhccccchhhhccccccccccccccccccc
Confidence 347888999997 999999999 454433 57999999 9999999994321
Q ss_pred -----------------------------------------------------------------------CCCCHHHHH
Q 004989 116 -----------------------------------------------------------------------RSVDVYECL 124 (720)
Q Consensus 116 -----------------------------------------------------------------------~~l~~~~~~ 124 (720)
..+++..++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 242 (401)
T cd05107 163 QRKSHVSLGSESDGGYMDMSKDESADYVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLV 242 (401)
T ss_pred ccccchhhhhccCccccccCCccccCccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHH
Confidence 135677889
Q ss_pred HHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhc
Q 004989 125 HIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTR 204 (720)
Q Consensus 125 ~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 204 (720)
.|+.||+.||.|||+.||+||||||+|||++.++.++|+|||++.......
T Consensus 243 ~~~~qi~~aL~~LH~~~ivHrdlkp~NiLl~~~~~~kL~DfGla~~~~~~~----------------------------- 293 (401)
T cd05107 243 GFSYQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMRDS----------------------------- 293 (401)
T ss_pred HHHHHHHHHHHHHhcCCcCcccCCcceEEEeCCCEEEEEecCcceeccccc-----------------------------
Confidence 999999999999999999999999999999999999999999874321110
Q ss_pred ccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCccccc
Q 004989 205 LRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA 284 (720)
Q Consensus 205 ~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 284 (720)
.+ .......+++.|+|||.+.
T Consensus 294 ----~~-------------------------------------------------------~~~~~~~~~~~y~aPE~~~ 314 (401)
T cd05107 294 ----NY-------------------------------------------------------ISKGSTFLPLKWMAPESIF 314 (401)
T ss_pred ----cc-------------------------------------------------------ccCCCcCCCCceeChHHhc
Confidence 00 0000124678899999998
Q ss_pred CCCCCccccchhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 285 GAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 285 ~~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
+..++.++|||||||++|||++ ||............+..+..++......+...+|+.+||+++|.+||++.+|++
T Consensus 315 ~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~ 394 (401)
T cd05107 315 NNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYNAIKRGYRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVH 394 (401)
T ss_pred CCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 8889999999999999999997 565443333333334333222222223345569999999999999999999986
No 370
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=99.94 E-value=1.3e-26 Score=243.43 Aligned_cols=208 Identities=21% Similarity=0.225 Sum_probs=152.3
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
...|..++..+.||||+++++ ++... .....+++||| .+++|.+++......+++..++.++.||+.||.|||+.||
T Consensus 53 ~~~ei~~l~~l~~~~i~~~~~-~~~~~-~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i 130 (284)
T cd05038 53 FEREIEILRTLDHENIVKYKG-VCEKP-GGRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRY 130 (284)
T ss_pred HHHHHHHHHhCCCCChheEEe-eeecC-CCCceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 346677899999999999998 44432 23357999999 8999999996655569999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+|+||||+||+++.++.++|+|||.+....... ++
T Consensus 131 ~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~---------------------------------~~------------ 165 (284)
T cd05038 131 IHRDLAARNILVESEDLVKISDFGLAKVLPEDK---------------------------------DY------------ 165 (284)
T ss_pred ecCCCCHHhEEEcCCCCEEEcccccccccccCC---------------------------------cc------------
Confidence 999999999999999999999998874332110 00
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
.. ......++..|+|||.+.+..++.++|||||||++|
T Consensus 166 -----------------------------------------~~-~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~ 203 (284)
T cd05038 166 -----------------------------------------YY-VKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLY 203 (284)
T ss_pred -----------------------------------------ee-ccCCCCCcccccCcHHHccCCCCcccchHHHhhhhh
Confidence 00 000013456799999998888999999999999999
Q ss_pred hccc---cCCCCchH--------------HHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 303 ELFC---PFSTGEEK--------------TRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 303 eLlt---pf~~~~~~--------------~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
||++ ||...... ......+......+..........+|+.+||.++|.+|||+.|+++
T Consensus 204 el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 278 (284)
T cd05038 204 ELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLIL 278 (284)
T ss_pred eeeccCCCcccccchhccccccccccccHHHHHHHHHcCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 9999 43322111 1111122222211111112234559999999999999999999985
No 371
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.94 E-value=9.2e-27 Score=245.96 Aligned_cols=211 Identities=18% Similarity=0.214 Sum_probs=157.2
Q ss_pred hchhhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 63 RKHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+...|..++.++ +||||+++++ .+..+. .+|+|||| .+++|.+++... ..+++..++.++.|++.||.|||+.
T Consensus 50 ~~~~E~~~l~~~~~~~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~ 124 (288)
T cd05583 50 HTRTERQVLEAVRRCPFLVTLHY-AFQTDT---KLHLILDYVNGGELFTHLYQR-EHFTESEVRVYIAEIVLALDHLHQL 124 (288)
T ss_pred HHHHHHHHHHhccCCcchhhhhe-eeecCC---EEEEEEecCCCCcHHHHHhhc-CCcCHHHHHHHHHHHHHHHHHHHHC
Confidence 334677788888 6999999998 444443 57999999 889999999544 3489999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
|++||||||+||+++.++.++++|||++..+.... ..
T Consensus 125 ~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~---------------------------------~~---------- 161 (288)
T cd05583 125 GIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEE---------------------------------EE---------- 161 (288)
T ss_pred CeeccCCCHHHeEECCCCCEEEEECcccccccccc---------------------------------cc----------
Confidence 99999999999999999999999999874321110 00
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC--CCccccchhhh
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP--VSCASDIYRLG 298 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~--~s~~sDIwSLG 298 (720)
......|+..|+|||.+.+.. .+.++||||||
T Consensus 162 ----------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG 195 (288)
T cd05583 162 ----------------------------------------------RAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLG 195 (288)
T ss_pred ----------------------------------------------ccccccCCccccCHHHhcCCCCCCcchhhhHHHH
Confidence 000135788999999987765 78899999999
Q ss_pred chhhhccc---cCCCCch---HHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCC---hHHHHcCcccCCCc
Q 004989 299 VLLFELFC---PFSTGEE---KTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK---MGELLQSEFLNEPR 368 (720)
Q Consensus 299 vll~eLlt---pf~~~~~---~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpt---a~eiL~hp~~~~~~ 368 (720)
+++|||++ ||..... .......+.... ++......+...+|+.+||+.+|++||| +.++|+||||+...
T Consensus 196 ~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~~~~~~~ 273 (288)
T cd05583 196 VLTFELLTGASPFTVDGEQNSQSEISRRILKSK-PPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHPFFQGID 273 (288)
T ss_pred HHHHHHHhCCCCcccCcccchHHHHHHHHHccC-CCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCcccccCC
Confidence 99999999 5532211 111112222221 2221222345569999999999999998 56789999998873
No 372
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.94 E-value=7.7e-27 Score=268.24 Aligned_cols=188 Identities=16% Similarity=0.200 Sum_probs=129.2
Q ss_pred CCcEEEEEec-CCCCHHHHHhCCCCC-------------------CCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcE
Q 004989 93 IDPFVHAIEW-GDVSLRQWLDKPKRS-------------------VDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCF 152 (720)
Q Consensus 93 ~~~~~lv~E~-~ggsL~~~L~~~~~~-------------------l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NI 152 (720)
...++++||| .+++|.+++...... .....+..|+.||+.||.|||++||+||||||+||
T Consensus 207 ~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLKP~NI 286 (566)
T PLN03225 207 EDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVKPQNI 286 (566)
T ss_pred CCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCCHHHE
Confidence 3468999999 899999998543211 12345678999999999999999999999999999
Q ss_pred EEcc-CCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCCCc
Q 004989 153 VMSS-FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSA 231 (720)
Q Consensus 153 Ll~~-~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~ 231 (720)
|++. ++.+||+|||++....... +.
T Consensus 287 Ll~~~~~~~KL~DFGlA~~l~~~~---------------------------------~~--------------------- 312 (566)
T PLN03225 287 IFSEGSGSFKIIDLGAAADLRVGI---------------------------------NY--------------------- 312 (566)
T ss_pred EEeCCCCcEEEEeCCCcccccccc---------------------------------cc---------------------
Confidence 9985 5789999999884321100 00
Q ss_pred cccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC----------------------CC
Q 004989 232 YGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP----------------------VS 289 (720)
Q Consensus 232 ~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~----------------------~s 289 (720)
.....+||+.|+|||.+.... ++
T Consensus 313 -----------------------------------~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~ 357 (566)
T PLN03225 313 -----------------------------------IPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLP 357 (566)
T ss_pred -----------------------------------CCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCC
Confidence 001146788999999764322 34
Q ss_pred ccccchhhhchhhhccccCCCC-chHHHHHHHhhcCCC---------Ccccccc-----------CchHHHHHHHcCCCC
Q 004989 290 CASDIYRLGVLLFELFCPFSTG-EEKTRTMSSLRHRVL---------PPQLLLK-----------FPKEASFCLWLLHPE 348 (720)
Q Consensus 290 ~~sDIwSLGvll~eLltpf~~~-~~~~~~~~~l~~~~~---------p~~~~~~-----------~p~~~~Li~~~L~~d 348 (720)
.++|||||||+||||++|.... .........+..... ++..... .....+||.+||++|
T Consensus 358 ~k~DVwSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~d 437 (566)
T PLN03225 358 DRFDIYSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFK 437 (566)
T ss_pred CCcccHHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCC
Confidence 4569999999999999954332 222222222221111 1110000 111238999999999
Q ss_pred CCCCCChHHHHcCcccCCCcc
Q 004989 349 PSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 349 P~~Rpta~eiL~hp~~~~~~~ 369 (720)
|.+|||+.++|+||||.....
T Consensus 438 P~kR~ta~e~L~Hpff~~~~~ 458 (566)
T PLN03225 438 GRQRISAKAALAHPYFDREGL 458 (566)
T ss_pred cccCCCHHHHhCCcCcCCCCc
Confidence 999999999999999987633
No 373
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.94 E-value=1.1e-26 Score=246.79 Aligned_cols=206 Identities=14% Similarity=0.105 Sum_probs=149.6
Q ss_pred hhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccC
Q 004989 68 GVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 147 (720)
Q Consensus 68 ~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDL 147 (720)
...+..+.|+||+++++............++++|+...++.+.+... ...++..++.++.||+.||.|||++||+||||
T Consensus 74 ~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDi 152 (294)
T PHA02882 74 WKNIHNIDHLGIPKYYGCGSFKRCRMYYRFILLEKLVENTKEIFKRI-KCKNKKLIKNIMKDMLTTLEYIHEHGISHGDI 152 (294)
T ss_pred HHHhccCCCCCCCcEEEeeeEecCCceEEEEEEehhccCHHHHHHhh-ccCCHHHHHHHHHHHHHHHHHHHhCCeecCCC
Confidence 34566789999999998444444444456888888667888877443 33688899999999999999999999999999
Q ss_pred CCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccccccc
Q 004989 148 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 227 (720)
Q Consensus 148 KP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q 227 (720)
||+|||++.++.++|+|||+++.+...... ...
T Consensus 153 Kp~Nill~~~~~~~l~DFGla~~~~~~~~~------------------------------~~~----------------- 185 (294)
T PHA02882 153 KPENIMVDGNNRGYIIDYGIASHFIIHGKH------------------------------IEY----------------- 185 (294)
T ss_pred CHHHEEEcCCCcEEEEEcCCceeeccCCcc------------------------------ccc-----------------
Confidence 999999999999999999988543211000 000
Q ss_pred CCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhccc-
Q 004989 228 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 306 (720)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt- 306 (720)
.........||+.|+|||++.+..++.++|||||||++|||++
T Consensus 186 ------------------------------------~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g 229 (294)
T PHA02882 186 ------------------------------------SKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGI 229 (294)
T ss_pred ------------------------------------ccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhC
Confidence 0000011368999999999999989999999999999999998
Q ss_pred --cCCCCchHHHH--------HHHhhcCCCCccccccCch-HHHHHHHcCCCCCCCCCChHHHHc
Q 004989 307 --PFSTGEEKTRT--------MSSLRHRVLPPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 307 --pf~~~~~~~~~--------~~~l~~~~~p~~~~~~~p~-~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
||......... ...+..... .....|+ ..+++..|+..+|++||++.++++
T Consensus 230 ~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~ 291 (294)
T PHA02882 230 KLPWKGFGHNGNLIHAAKCDFIKRLHEGKI---KIKNANKFIYDFIECVTKLSYEEKPDYDALIK 291 (294)
T ss_pred CCCCCccccchHHHHHhHHHHHHHhhhhhh---ccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence 77654222111 122222111 1122344 449999999999999999999975
No 374
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=99.94 E-value=2.3e-26 Score=240.52 Aligned_cols=208 Identities=13% Similarity=0.082 Sum_probs=152.1
Q ss_pred chhhhhhcccCCCCCceecccceeecCC--CCCcEEEEEec-CCCCHHHHHhC-----CCCCCCHHHHHHHHHHHHHHHH
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEA--AIDPFVHAIEW-GDVSLRQWLDK-----PKRSVDVYECLHIFRQIVEIVY 135 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~--~~~~~~lv~E~-~ggsL~~~L~~-----~~~~l~~~~~~~i~~QIl~aL~ 135 (720)
..+|..+|+.++||||+++++.+..... .....++++|| .+++|.+++.. ....++...++.++.||+.||+
T Consensus 48 ~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~ 127 (273)
T cd05074 48 FLREAACMKEFDHPNVIKLIGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGME 127 (273)
T ss_pred HHHHHHHHhcCCCCCcceEEEEEccCCCCCcccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHH
Confidence 3467789999999999999994333222 12245788999 88999988732 1224789999999999999999
Q ss_pred HHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccC
Q 004989 136 AAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 215 (720)
Q Consensus 136 yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~ 215 (720)
|||+.||+||||||+||+++.++.++++|||.+......... .
T Consensus 128 ~lH~~~i~H~dikp~nili~~~~~~kl~dfg~~~~~~~~~~~--------------------------------~----- 170 (273)
T cd05074 128 YLSSKNFIHRDLAARNCMLNENMTVCVADFGLSKKIYSGDYY--------------------------------R----- 170 (273)
T ss_pred HHHhCCEeecccchhhEEEcCCCCEEECcccccccccCCcce--------------------------------e-----
Confidence 999999999999999999999999999999877432111000 0
Q ss_pred CCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccch
Q 004989 216 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIY 295 (720)
Q Consensus 216 ~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIw 295 (720)
......+++.|++||.+.+..++.++|||
T Consensus 171 ---------------------------------------------------~~~~~~~~~~~~~pe~~~~~~~~~~sDi~ 199 (273)
T cd05074 171 ---------------------------------------------------QGCASKLPVKWLALESLADNVYTTHSDVW 199 (273)
T ss_pred ---------------------------------------------------cCCCccCchhhcCHhHHhcCccchhhhhH
Confidence 00001345679999999888899999999
Q ss_pred hhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 296 RLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 296 SLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
||||++|||++ ||..... ......+.............+...+++.+||..+|++||++.++++
T Consensus 200 slG~il~el~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~ 267 (273)
T cd05074 200 AFGVTMWEIMTRGQTPYAGVEN-SEIYNYLIKGNRLKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRD 267 (273)
T ss_pred HHHHHHHHHhhCCCCCCCCCCH-HHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 99999999997 4443333 2333333333222222233355569999999999999999999986
No 375
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=99.94 E-value=1.6e-27 Score=258.36 Aligned_cols=201 Identities=18% Similarity=0.243 Sum_probs=158.2
Q ss_pred hhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCcee
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|...|++-+|.||+=+.| ++..+. +.||.-+ .|-+|+.+|.-...+|.....+.|++||++|++|||.++|||
T Consensus 437 nEVa~lkkTRH~NIlLFMG-~~~~p~----~AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIH 511 (678)
T KOG0193|consen 437 NEVAVLKKTRHENILLFMG-ACMNPP----LAIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIH 511 (678)
T ss_pred HHHHHHhhcchhhheeeeh-hhcCCc----eeeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhh
Confidence 6778999999999999999 554442 3788888 999999999666667999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccc
Q 004989 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
||||..||+|.+++.|||.|||++.....-. ++-
T Consensus 512 rDLKSnNIFl~~~~kVkIgDFGLatvk~~w~--------------------------------g~~-------------- 545 (678)
T KOG0193|consen 512 RDLKSNNIFLHEDLKVKIGDFGLATVKTRWS--------------------------------GEQ-------------- 545 (678)
T ss_pred hhccccceEEccCCcEEEecccceeeeeeec--------------------------------ccc--------------
Confidence 9999999999999999998887763211100 000
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC---CCCccccchhhhchh
Q 004989 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA---PVSCASDIYRLGVLL 301 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~---~~s~~sDIwSLGvll 301 (720)
......|...|||||+++.. +|++.+|||||||++
T Consensus 546 ------------------------------------------q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~ 583 (678)
T KOG0193|consen 546 ------------------------------------------QLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVW 583 (678)
T ss_pred ------------------------------------------ccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHH
Confidence 00012467889999999744 499999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCcc---ccccCchH-HHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQ---LLLKFPKE-ASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~---~~~~~p~~-~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||. ......++-.+..+.+.+. .....|++ .+|+..||.+++++||...+||.
T Consensus 584 YELltg~lPys-i~~~dqIifmVGrG~l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~ 648 (678)
T KOG0193|consen 584 YELLTGELPYS-IQNRDQIIFMVGRGYLMPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLS 648 (678)
T ss_pred HHHHhCcCCcC-CCChhheEEEecccccCccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHH
Confidence 99999 887 4444455555555644443 34566744 49999999999999999999986
No 376
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=99.94 E-value=2.3e-26 Score=240.10 Aligned_cols=201 Identities=15% Similarity=0.226 Sum_probs=153.2
Q ss_pred chhhhhhcc-cCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHh---CCCCCCCHHHHHHHHHHHHHHHHHHH
Q 004989 64 KHSDGVELT-HGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLD---KPKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 64 ~~~e~~~L~-~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~---~~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
...|..++. .++||||+++++ ++..+. ..+++||| .|++|.+++. .....+++..++.++.||+.||.|||
T Consensus 55 ~~~e~~~l~~~~~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh 130 (269)
T cd08528 55 IVSEVTIIKEQLRHPNIVRYYK-TFLEND---RLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLH 130 (269)
T ss_pred HHHHHHHHhhcCCCCCeeeEEe-eEccCC---eEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhc
Confidence 335666665 489999999999 444432 67999999 8999999872 34455899999999999999999999
Q ss_pred H-CCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCC
Q 004989 139 S-QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 139 s-~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~ 217 (720)
+ .||+|+||||+||+++.++.++|+|||.+.......
T Consensus 131 ~~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~------------------------------------------ 168 (269)
T cd08528 131 KEKRIVHRDLTPNNIMLGEDDKVTITDFGLAKQKQPES------------------------------------------ 168 (269)
T ss_pred cCCceeecCCCHHHEEECCCCcEEEecccceeeccccc------------------------------------------
Confidence 6 789999999999999999999999998873321100
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhh
Q 004989 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRL 297 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSL 297 (720)
......|+..|+|||.+.+..++.++|||||
T Consensus 169 -------------------------------------------------~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~sl 199 (269)
T cd08528 169 -------------------------------------------------KLTSVVGTILYSCPEIVKNEPYGEKADVWAF 199 (269)
T ss_pred -------------------------------------------------ccccccCcccCcChhhhcCCCCchHHHHHHH
Confidence 0001357888999999998889999999999
Q ss_pred hchhhhccc---cCCCCchHHHHHHHhhcCCCCcccc-ccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 298 GVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLL-LKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 298 Gvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~-~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
||++|||++ ||...... .....+.....++... ...+...+|+.+||..||++||++.|+..
T Consensus 200 G~ll~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~ 265 (269)
T cd08528 200 GCILYQMCTLQPPFYSTNML-SLATKIVEAVYEPLPEGMYSEDVTDVITSCLTPDAEARPDIIQVSA 265 (269)
T ss_pred HHHHHHHHhCCCcccccCHH-HHHHHHhhccCCcCCcccCCHHHHHHHHHHCCCCCccCCCHHHHHH
Confidence 999999999 55443332 2333333333333222 22345569999999999999999999875
No 377
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.94 E-value=2.5e-27 Score=239.63 Aligned_cols=217 Identities=18% Similarity=0.289 Sum_probs=166.9
Q ss_pred cCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCc
Q 004989 73 HGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSC 151 (720)
Q Consensus 73 ~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~N 151 (720)
.-+||.+|.+.. +|+.+. .+++|.|| .||+|.-.+ +..++++++.++.|-..|+.||.|||++|||.||||.+|
T Consensus 307 asn~pflvglhs-cfqtes---rlffvieyv~ggdlmfhm-qrqrklpeeharfys~ei~lal~flh~rgiiyrdlkldn 381 (593)
T KOG0695|consen 307 ASNNPFLVGLHS-CFQTES---RLFFVIEYVNGGDLMFHM-QRQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDN 381 (593)
T ss_pred ccCCCeEEehhh-hhcccc---eEEEEEEEecCcceeeeh-hhhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccc
Confidence 468999999999 776665 56999999 999998777 445669999999999999999999999999999999999
Q ss_pred EEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCCCc
Q 004989 152 FVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSA 231 (720)
Q Consensus 152 ILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~ 231 (720)
+|++..|++||.|+|.|+.--.+ +|.
T Consensus 382 vlldaeghikltdygmcke~l~~---------------------------------gd~--------------------- 407 (593)
T KOG0695|consen 382 VLLDAEGHIKLTDYGMCKEGLGP---------------------------------GDT--------------------- 407 (593)
T ss_pred eEEccCCceeecccchhhcCCCC---------------------------------Ccc---------------------
Confidence 99999999999999999542111 221
Q ss_pred cccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhccc---cC
Q 004989 232 YGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PF 308 (720)
Q Consensus 232 ~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt---pf 308 (720)
....+|||.|+|||++++..|++++|+|+|||++|||+. ||
T Consensus 408 ------------------------------------tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspf 451 (593)
T KOG0695|consen 408 ------------------------------------TSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPF 451 (593)
T ss_pred ------------------------------------cccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCc
Confidence 012689999999999999999999999999999999998 66
Q ss_pred CC------C-chHHHHHHHhh-cCCCCccccccCchHHHHHHHcCCCCCCCCC------ChHHHHcCcccCCC-ccchHH
Q 004989 309 ST------G-EEKTRTMSSLR-HRVLPPQLLLKFPKEASFCLWLLHPEPSGRP------KMGELLQSEFLNEP-RDSMEE 373 (720)
Q Consensus 309 ~~------~-~~~~~~~~~l~-~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rp------ta~eiL~hp~~~~~-~~~l~e 373 (720)
.- . +...-.+..+. +.+.-|. +..-+...+++..|.+||.+|. ...++..|+||+.. ++.+++
T Consensus 452 divgm~n~d~ntedylfqvilekqiripr--slsvkas~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr~idwd~leq 529 (593)
T KOG0695|consen 452 DIVGMDNPDMNTEDYLFQVILEKQIRIPR--SLSVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFRSIDWDLLEQ 529 (593)
T ss_pred ceecCCCcccchhHHHHHHHhhhcccccc--eeehhhHHHHHHhhcCCcHHhcCCCcccchhhhhcchhhhhCCHHHHhh
Confidence 42 1 12222233333 3332222 2234556899999999999995 47899999999976 455555
Q ss_pred HHHHHHHhhhhhh
Q 004989 374 REAAIELREQIDE 386 (720)
Q Consensus 374 ~~~~~~~~e~~~~ 386 (720)
+.-.+++.+....
T Consensus 530 k~v~ppf~p~i~~ 542 (593)
T KOG0695|consen 530 KQVLPPFQPQITD 542 (593)
T ss_pred cccCCCCCCcccc
Confidence 5555555555544
No 378
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.94 E-value=5.4e-27 Score=226.84 Aligned_cols=208 Identities=15% Similarity=0.216 Sum_probs=156.9
Q ss_pred chhhhhhcccCC-CCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 64 KHSDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 64 ~~~e~~~L~~l~-HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
..||..||..|. ||||++++++ ..+.... ...+++|| ...+...+. ..++..+++.++.||+.||+|||++|
T Consensus 79 IkREikIL~nL~gg~NIi~L~Di-V~Dp~Sk-tpaLiFE~v~n~Dfk~ly----~tl~d~dIryY~~elLkALdyCHS~G 152 (338)
T KOG0668|consen 79 IKREIKILQNLRGGPNIIKLLDI-VKDPESK-TPSLIFEYVNNTDFKQLY----PTLTDYDIRYYIYELLKALDYCHSMG 152 (338)
T ss_pred HHHHHHHHHhccCCCCeeehhhh-hcCcccc-CchhHhhhhccccHHHHh----hhhchhhHHHHHHHHHHHHhHHHhcC
Confidence 338999999988 9999999994 4343333 45789999 888887755 34889999999999999999999999
Q ss_pred ceeccCCCCcEEEcc-CCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 142 IVVHNVRPSCFVMSS-FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 142 IvHrDLKP~NILl~~-~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
|+|||+||.|++|+. .-.++|||+|+|..+... .++
T Consensus 153 ImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~---------------------------------~eY---------- 189 (338)
T KOG0668|consen 153 IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPG---------------------------------KEY---------- 189 (338)
T ss_pred cccccCCcceeeechhhceeeeeecchHhhcCCC---------------------------------cee----------
Confidence 999999999999994 456899999887332110 000
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC-CCccccchhhhc
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGV 299 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGv 299 (720)
...+.+..|.-||++..-. |+.+-|+|||||
T Consensus 190 ------------------------------------------------nVRVASRyfKGPELLVdy~~YDYSLD~WS~Gc 221 (338)
T KOG0668|consen 190 ------------------------------------------------NVRVASRYFKGPELLVDYQMYDYSLDMWSLGC 221 (338)
T ss_pred ------------------------------------------------eeeeehhhcCCchheeechhccccHHHHHHHH
Confidence 1146678899999997766 899999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhh-------------c--CCCCccccc---------------------cCchHHHH
Q 004989 300 LLFELFC---PFSTGEEKTRTMSSLR-------------H--RVLPPQLLL---------------------KFPKEASF 340 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~-------------~--~~~p~~~~~---------------------~~p~~~~L 340 (720)
+|..|+. ||.-..........+. + -.++|.+.. ..|+..||
T Consensus 222 mlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDl 301 (338)
T KOG0668|consen 222 MLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDL 301 (338)
T ss_pred HHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHH
Confidence 9999998 8765432222111111 1 123333221 12556699
Q ss_pred HHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004989 341 CLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 341 i~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
+.++|.+|-.+|+||.|++.||||....
T Consensus 302 ldklLrYDHqeRlTakEam~HpyF~~~~ 329 (338)
T KOG0668|consen 302 LDKLLRYDHQERLTAKEAMAHPYFAPVR 329 (338)
T ss_pred HHHHHhhccccccchHHHhcCchHHHHH
Confidence 9999999999999999999999998763
No 379
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.93 E-value=4.9e-26 Score=231.63 Aligned_cols=205 Identities=23% Similarity=0.288 Sum_probs=160.3
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
...|...+++++|+||+++++ .+... ...++++|| .+++|.+++..... ++...++.++.+|+.+|.|||+.||
T Consensus 34 ~~~e~~~~~~l~~~~i~~~~~-~~~~~---~~~~l~~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~l~~~l~~lh~~~i 108 (244)
T smart00220 34 ILREISILKKLKHPNIVRLYD-VFEDE---DKLYLVMEYCDGGDLFDLLKKRGR-LSEDEARFYARQILSALEYLHSNGI 108 (244)
T ss_pred HHHHHHHHHhCCCCcHHHHHh-heeeC---CEEEEEEeCCCCCCHHHHHHhccC-CCHHHHHHHHHHHHHHHHHHHHcCe
Confidence 336667888899999999999 44333 267999999 77799999955433 8999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+|+||+|.||+++.++.++++|||.+.......
T Consensus 109 ~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~----------------------------------------------- 141 (244)
T smart00220 109 IHRDLKPENILLDEDGHVKLADFGLARQLDPGG----------------------------------------------- 141 (244)
T ss_pred ecCCcCHHHeEECCCCcEEEccccceeeecccc-----------------------------------------------
Confidence 999999999999999999999998873321110
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......++..|+|||.+.+..++.++||||||+++|
T Consensus 142 --------------------------------------------~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~ 177 (244)
T smart00220 142 --------------------------------------------LLTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILY 177 (244)
T ss_pred --------------------------------------------ccccccCCcCCCCHHHHccCCCCchhhHHHHHHHHH
Confidence 000135688899999998888899999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCCCccccc--cCchHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004989 303 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL--KFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~--~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
+|++ ||............+.....+..... ......+++.+||..+|++||++.++++||||
T Consensus 178 ~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~~~~~ 244 (244)
T smart00220 178 ELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWKISPEAKDLIRKLLVKDPEKRLTAEEALQHPFF 244 (244)
T ss_pred HHHhCCCCCCCCCcHHHHHHHHhccCCCCccccccCCHHHHHHHHHHccCCchhccCHHHHhhCCCC
Confidence 9999 66553344444444444433332222 22345699999999999999999999999997
No 380
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.93 E-value=1.4e-25 Score=251.88 Aligned_cols=212 Identities=17% Similarity=0.238 Sum_probs=163.7
Q ss_pred chhhhhhccc-CCCCCceeccccee-ecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004989 64 KHSDGVELTH-GDHLRNQGGLSGVC-ENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 64 ~~~e~~~L~~-l~HpnIV~l~~~~~-~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
.|.|..+|.. -+|||++.+|++++ .+....+++|+|||| .|||.-|++++ .+..+.|..+..|++.++.||.+||.
T Consensus 62 iE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~ 141 (953)
T KOG0587|consen 62 IELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHN 141 (953)
T ss_pred HHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhh
Confidence 3344445444 67999999999666 344566789999999 99999998833 36669999999999999999999999
Q ss_pred CCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCC
Q 004989 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
..++|||||-.|||++.++.|||+|||++.+..+..
T Consensus 142 nkviHRDikG~NiLLT~e~~VKLvDFGvSaQldsT~-------------------------------------------- 177 (953)
T KOG0587|consen 142 NKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDSTV-------------------------------------------- 177 (953)
T ss_pred cceeeecccCceEEEeccCcEEEeeeeeeeeeeccc--------------------------------------------
Confidence 999999999999999999999999999884421110
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC-----CCccccc
Q 004989 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-----VSCASDI 294 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-----~s~~sDI 294 (720)
| +....+|||.|||||++...+ |+..+|+
T Consensus 178 -------------------------------g---------------rRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~ 211 (953)
T KOG0587|consen 178 -------------------------------G---------------RRNTFIGTPYWMAPEVIACDESPDATYDYRSDL 211 (953)
T ss_pred -------------------------------c---------------cccCcCCCcccccceeeecccCCCCCcccccch
Confidence 0 112258999999999996543 7889999
Q ss_pred hhhhchhhhccc---cCCCCchHHHHHHHhhcCCCCccc--cccCchHH-HHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 295 YRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQL--LLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 295 wSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~--~~~~p~~~-~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
||||++..||.- |+....+.-..+... +.+||.+ +..|.+.. +||..||++|-.+||++.++|+|||++..
T Consensus 212 WsLGITaIEladG~PPl~DmHPmraLF~Ip--RNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~hpFi~e~ 288 (953)
T KOG0587|consen 212 WSLGITAIEMAEGAPPLCDMHPMRALFLIP--RNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKHPFITEQ 288 (953)
T ss_pred hhccceeehhcCCCCCccCcchhhhhccCC--CCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhccCCccccc
Confidence 999999999998 333333332222222 2334443 34565554 99999999999999999999999999954
No 381
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=99.93 E-value=4.1e-26 Score=251.97 Aligned_cols=205 Identities=20% Similarity=0.250 Sum_probs=144.5
Q ss_pred ecCCCcccccccccCCccccccccc-CCCC---CCcccccccccCCCCccchhhchhhhhhcccCCCCCceecccceeec
Q 004989 14 IMEGSSDSAWQDSDSSRALNISGVS-DRNP---RLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCEN 89 (720)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~r~~~~~~~~~~~~~r~~~e~~~L~~l~HpnIV~l~~~~~~~ 89 (720)
.|.+...-.|...+..+..+.+.|- .+|. +.++++-+. ....-.-+-|--+|..+|.+++|||||++++ +-++
T Consensus 6 ~l~~~~~y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~--~~~~~r~~e~~~~EieilkKLnh~NIVk~f~-iee~ 82 (732)
T KOG4250|consen 6 VLTSGENYLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFN--KESSLRPRERWCREIEILKKLNHPNIVKLFD-IEET 82 (732)
T ss_pred ccccCCCcceeehhhhcCCccceeeeecccccccchhHHhhh--hhcccchHHHHHHHHHHHHHcCchhhhhhcc-cCCc
Confidence 3444555678886654433333222 2332 223333222 2222233334458999999999999999999 4433
Q ss_pred CC---CCCcEEEEEec-CCCCHHHHHhCC--CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEcc--CCc--
Q 004989 90 EA---AIDPFVHAIEW-GDVSLRQWLDKP--KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSS--FNH-- 159 (720)
Q Consensus 90 ~~---~~~~~~lv~E~-~ggsL~~~L~~~--~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~--~~~-- 159 (720)
.. -...-.++||| .||||+..|+++ ...|++.+++.++..++.||.|||.+|||||||||.||++-. +|+
T Consensus 83 ~~~~~~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~I 162 (732)
T KOG4250|consen 83 KFLGLVTRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSI 162 (732)
T ss_pred cccCcccccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceE
Confidence 32 03345889999 999999999543 345999999999999999999999999999999999999863 233
Q ss_pred eEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCCCccccccccc
Q 004989 160 VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLV 239 (720)
Q Consensus 160 vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~ 239 (720)
.||+|||.|+....++
T Consensus 163 yKLtDfG~Arel~d~s---------------------------------------------------------------- 178 (732)
T KOG4250|consen 163 YKLTDFGAARELDDNS---------------------------------------------------------------- 178 (732)
T ss_pred EeeecccccccCCCCC----------------------------------------------------------------
Confidence 5676666664432210
Q ss_pred cccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC-CCCCccccchhhhchhhhccc---cCCCCc
Q 004989 240 EGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFELFC---PFSTGE 312 (720)
Q Consensus 240 ~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sDIwSLGvll~eLlt---pf~~~~ 312 (720)
.-+..+||+.|.+||++.. ..|+..+|.|||||++|++.| ||.+..
T Consensus 179 ---------------------------~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~ 228 (732)
T KOG4250|consen 179 ---------------------------LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFG 228 (732)
T ss_pred ---------------------------eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCC
Confidence 0022689999999999984 779999999999999999999 666553
No 382
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=99.93 E-value=4.6e-26 Score=246.09 Aligned_cols=203 Identities=19% Similarity=0.206 Sum_probs=163.0
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
..-.|+.++.+++|||||+++| ++... ++|+|||+ .-|.|+.||..+...++......+.+||+.||.|||+..
T Consensus 437 kflqEa~iMrnfdHphIikLIG-v~~e~----P~WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkr 511 (974)
T KOG4257|consen 437 KFLQEASIMRNFDHPHIIKLIG-VCVEQ----PMWIVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKR 511 (974)
T ss_pred HHHHHHHHHHhCCCcchhheee-eeecc----ceeEEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhc
Confidence 4448899999999999999999 55554 47999999 889999999777677999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
+|||||-..|||+.+...|||.|||+++-...+..-
T Consensus 512 fVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~yY-------------------------------------------- 547 (974)
T KOG4257|consen 512 FVHRDIAARNILVSSPQCVKLADFGLSRYLEDDAYY-------------------------------------------- 547 (974)
T ss_pred hhhhhhhhhheeecCcceeeecccchhhhccccchh--------------------------------------------
Confidence 999999999999999999999888877433211000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
. . ..... ..-|||||.++-..++.+||||-|||.+
T Consensus 548 -k-----------------------a------------S~~kL---------PIKWmaPESINfRrFTtASDVWMFgVCm 582 (974)
T KOG4257|consen 548 -K-----------------------A------------SRGKL---------PIKWMAPESINFRRFTTASDVWMFGVCM 582 (974)
T ss_pred -h-----------------------c------------ccccc---------ceeecCccccchhcccchhhHHHHHHHH
Confidence 0 0 00111 3469999999988999999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
||++. ||.+-... ..+..+.++..+|..+..-|....|+.+||.+||.+||++.||..
T Consensus 583 WEIl~lGvkPfqgvkNs-DVI~~iEnGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~ 644 (974)
T KOG4257|consen 583 WEILSLGVKPFQGVKNS-DVIGHIENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKA 644 (974)
T ss_pred HHHHHhcCCcccccccc-ceEEEecCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHH
Confidence 99998 88876554 344455566665555445455569999999999999999988863
No 383
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.93 E-value=1.1e-25 Score=242.57 Aligned_cols=201 Identities=20% Similarity=0.213 Sum_probs=162.1
Q ss_pred hhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~-~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.|+.++..+.|||+|+|++ +|..+. +|||+.|| +.|+|.+||+.-. ..++....+.++.||..|+.||..+++|
T Consensus 312 kEAAvMKeikHpNLVqLLG-VCT~Ep---PFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFI 387 (1157)
T KOG4278|consen 312 KEAAVMKEIKHPNLVQLLG-VCTHEP---PFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFI 387 (1157)
T ss_pred HHHHHHHhhcCccHHHHhh-hhccCC---CeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhh
Confidence 6778999999999999999 554443 68999999 9999999995543 3478888889999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||-..|.|+.++..||++|||+++....+...
T Consensus 388 HRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYT---------------------------------------------- 421 (1157)
T KOG4278|consen 388 HRDLAARNCLVGENHIVKVADFGLSRLMTGDTYT---------------------------------------------- 421 (1157)
T ss_pred hhhhhhhhccccccceEEeeccchhhhhcCCcee----------------------------------------------
Confidence 9999999999999999999888877443222110
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
+.. ...|| .-|.|||-|....++.++|||+|||+|||
T Consensus 422 ------------------------AHA----------GAKFP---------IKWTAPEsLAyNtFSiKSDVWAFGVLLWE 458 (1157)
T KOG4278|consen 422 ------------------------AHA----------GAKFP---------IKWTAPESLAYNTFSIKSDVWAFGVLLWE 458 (1157)
T ss_pred ------------------------ccc----------CccCc---------ccccCcccccccccccchhhHHHHHHHHH
Confidence 011 12233 35899999999999999999999999999
Q ss_pred ccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 304 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 304 Llt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
+.| ||++.+- ...+..+.++.........-|+..+|++.||++.|++||+++||-+
T Consensus 459 IATYGMsPYPGidl-SqVY~LLEkgyRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHq 518 (1157)
T KOG4278|consen 459 IATYGMSPYPGIDL-SQVYGLLEKGYRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQ 518 (1157)
T ss_pred HHhcCCCCCCCccH-HHHHHHHhccccccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHH
Confidence 999 7877544 3666666666655555566677779999999999999999999854
No 384
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.92 E-value=6.1e-25 Score=232.80 Aligned_cols=92 Identities=14% Similarity=0.053 Sum_probs=79.5
Q ss_pred hhhhhcccC--------CCCCceecccceeecCCCCCcEEEEEecCCCCHHHHH-hCCCCCCCHHHHHHHHHHHHHHHHH
Q 004989 66 SDGVELTHG--------DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWL-DKPKRSVDVYECLHIFRQIVEIVYA 136 (720)
Q Consensus 66 ~e~~~L~~l--------~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L-~~~~~~l~~~~~~~i~~QIl~aL~y 136 (720)
-|+.+|.++ .-.+||+|++.|-..+.++.++|+|+|+.|.+|..|| ....+.++...++.|++||+.||+|
T Consensus 123 DEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGpNG~HVCMVfEvLGdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdY 202 (590)
T KOG1290|consen 123 DEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGPNGQHVCMVFEVLGDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDY 202 (590)
T ss_pred HHHHHHHHHHhcCCCCCCCceeeeeeccceecCCCCcEEEEEehhhhhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHH
Confidence 455566653 2357999999888999999999999999999999999 4455669999999999999999999
Q ss_pred HHH-CCceeccCCCCcEEEccC
Q 004989 137 AHS-QGIVVHNVRPSCFVMSSF 157 (720)
Q Consensus 137 LHs-~gIvHrDLKP~NILl~~~ 157 (720)
||. .||||-||||+|||+...
T Consensus 203 LH~ecgIIHTDlKPENvLl~~~ 224 (590)
T KOG1290|consen 203 LHRECGIIHTDLKPENVLLCST 224 (590)
T ss_pred HHHhcCccccCCCcceeeeecc
Confidence 997 599999999999999754
No 385
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.92 E-value=3.1e-25 Score=231.40 Aligned_cols=214 Identities=16% Similarity=0.219 Sum_probs=160.1
Q ss_pred hhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH--CCc
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS--QGI 142 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs--~gI 142 (720)
||..|-..|+||.||++|+.+-.+.. .||-|+|| .|.+|.-||+++. .+++.+++.|+.||+.||.||.. -.|
T Consensus 516 REyrIHKeLDHpRIVKlYDyfslDtd---sFCTVLEYceGNDLDFYLKQhk-lmSEKEARSIiMQiVnAL~YLNEikpPI 591 (775)
T KOG1151|consen 516 REYRIHKELDHPRIVKLYDYFSLDTD---SFCTVLEYCEGNDLDFYLKQHK-LMSEKEARSIIMQIVNALKYLNEIKPPI 591 (775)
T ss_pred HHHhhhhccCcceeeeeeeeeeeccc---cceeeeeecCCCchhHHHHhhh-hhhHHHHHHHHHHHHHHHHHHhccCCCe
Confidence 77778899999999999994434433 58999999 9999999996554 48999999999999999999997 479
Q ss_pred eeccCCCCcEEEc---cCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCC
Q 004989 143 VVHNVRPSCFVMS---SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 143 vHrDLKP~NILl~---~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
||-||||.||||- ..|.+||.|||+++....++.. .+.|+--+
T Consensus 592 IHYDLKPgNILLv~GtacGeIKITDFGLSKIMdddSy~------------------------------~vdGmeLT---- 637 (775)
T KOG1151|consen 592 IHYDLKPGNILLVNGTACGEIKITDFGLSKIMDDDSYN------------------------------SVDGMELT---- 637 (775)
T ss_pred eeeccCCccEEEecCcccceeEeeecchhhhccCCccC------------------------------cccceeee----
Confidence 9999999999995 4578999988888664433211 11111000
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC----CCCccccch
Q 004989 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA----PVSCASDIY 295 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~----~~s~~sDIw 295 (720)
....||.||++||.+.-. ..+.++|||
T Consensus 638 -------------------------------------------------SQgAGTYWYLPPEcFvVgkePPKIsnKVDVW 668 (775)
T KOG1151|consen 638 -------------------------------------------------SQGAGTYWYLPPECFVVGKEPPKISNKVDVW 668 (775)
T ss_pred -------------------------------------------------cccCceeeecCcceeecCCCCCccccceeeE
Confidence 014789999999998544 279999999
Q ss_pred hhhchhhhccc---cCCCCchHHHHHH-----HhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 296 RLGVLLFELFC---PFSTGEEKTRTMS-----SLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 296 SLGvll~eLlt---pf~~~~~~~~~~~-----~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|+|||+|..+. ||........++. ....-.+|+. +-..+...+||++||.+--++|..+.++..||||..-
T Consensus 669 SvGVIFyQClYGrKPFGhnqsQQdILqeNTIlkAtEVqFP~K-PvVsseAkaFIRRCLaYRKeDR~DV~qLA~dpyllPh 747 (775)
T KOG1151|consen 669 SVGVIFYQCLYGRKPFGHNQSQQDILQENTILKATEVQFPPK-PVVSSEAKAFIRRCLAYRKEDRIDVQQLACDPYLLPH 747 (775)
T ss_pred eeehhhhhhhccCCCCCCchhHHHHHhhhchhcceeccCCCC-CccCHHHHHHHHHHHHhhhhhhhhHHHHccCccccch
Confidence 99999999998 6765433222211 1111223333 2234555699999999999999999999999998763
No 386
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.92 E-value=2.6e-26 Score=226.91 Aligned_cols=214 Identities=20% Similarity=0.249 Sum_probs=158.7
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCC---cEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAID---PFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~---~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
|..+|..+|..++|.|++..++ +.+.. +.. .+|++.|+...+|...|-.+. .++...++-+++||+.||.|||+
T Consensus 98 rvFre~kmLcfFkHdNVLSaLD-ILQPp-h~dfFqEiYV~TELmQSDLHKIIVSPQ-~Ls~DHvKVFlYQILRGLKYLHs 174 (449)
T KOG0664|consen 98 RVFREIKMLSSFRHDNVLSLLD-ILQPA-NPSFFQELYVLTELMQSDLHKIIVSPQ-ALTPDHVKVFVYQILRGLKYLHT 174 (449)
T ss_pred HHHHHHHHHHhhccccHHHHHH-hcCCC-CchHHHHHHHHHHHHHhhhhheeccCC-CCCcchhhhhHHHHHhhhHHHhh
Confidence 6668888999999999999999 33222 221 258889998889999885554 49999999999999999999999
Q ss_pred CCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCC
Q 004989 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
.||.||||||.|+|++++..+||||||+++....+..
T Consensus 175 A~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~~------------------------------------------- 211 (449)
T KOG0664|consen 175 ANILHRDIKPGNLLVNSNCILKICDFGLARTWDQRDR------------------------------------------- 211 (449)
T ss_pred cchhhccCCCccEEeccCceEEecccccccccchhhh-------------------------------------------
Confidence 9999999999999999999999988888754322100
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC-CCccccchhhh
Q 004989 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLG 298 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLG 298 (720)
..| +..+-|-+|+|||++.|.. |+.++||||+|
T Consensus 212 --------------------------------------------~hM--TqEVVTQYYRAPEiLMGaRhYs~AvDiWSVG 245 (449)
T KOG0664|consen 212 --------------------------------------------LNM--THEVVTQYYRAPELLMGARRYTGAVDIWSVG 245 (449)
T ss_pred --------------------------------------------hhh--HHHHHHHHhccHHHhhcchhhcCccceehhh
Confidence 000 1135688999999999987 99999999999
Q ss_pred chhhhccc---cCCCCch--------------HHHHHHH---------hhcCCCCccccccC---------chHHHHHHH
Q 004989 299 VLLFELFC---PFSTGEE--------------KTRTMSS---------LRHRVLPPQLLLKF---------PKEASFCLW 343 (720)
Q Consensus 299 vll~eLlt---pf~~~~~--------------~~~~~~~---------l~~~~~p~~~~~~~---------p~~~~Li~~ 343 (720)
||+.||+. -|....+ ..+.|.. ++....+|.+.-.+ -...+++..
T Consensus 246 CIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~ 325 (449)
T KOG0664|consen 246 CIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQK 325 (449)
T ss_pred HHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHH
Confidence 99999997 2322111 1111211 22222333322111 122388899
Q ss_pred cCCCCCCCCCChHHHHcCcccCCCc
Q 004989 344 LLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 344 ~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
||++||.+|.+.++++.|+++.+.+
T Consensus 326 ~l~~d~dkris~~~A~~~~~~~e~R 350 (449)
T KOG0664|consen 326 LLHFDPDKRISVEEALQHRYLEEGR 350 (449)
T ss_pred HhCCCCcccccHhhhcccccccccc
Confidence 9999999999999999999987753
No 387
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=99.92 E-value=1.6e-25 Score=247.88 Aligned_cols=204 Identities=16% Similarity=0.227 Sum_probs=164.3
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
-.-.|+.||.+++||||++|-|++-... +++|+.|| ++|+|..||+++.+.++..+..-+++.|+.|+.||-+.|
T Consensus 676 dFL~EAsIMGQFdHPNIIrLEGVVTks~----PvMIiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~ 751 (996)
T KOG0196|consen 676 DFLSEASIMGQFDHPNIIRLEGVVTKSK----PVMIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMN 751 (996)
T ss_pred hhhhhhhhcccCCCCcEEEEEEEEecCc----eeEEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcC
Confidence 3348999999999999999999554443 68999999 999999999888888999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
+|||||-..|||++.+-..|+.|||+++....+ .
T Consensus 752 YVHRDLAARNILVNsnLvCKVsDFGLSRvledd-----------------------------------~----------- 785 (996)
T KOG0196|consen 752 YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD-----------------------------------P----------- 785 (996)
T ss_pred chhhhhhhhheeeccceEEEeccccceeecccC-----------------------------------C-----------
Confidence 999999999999999999999888887533211 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
+..+...| ... ...|.|||.+...+++.+|||||+||+|
T Consensus 786 ----------------------~~~ytt~G----------GKI---------PiRWTAPEAIa~RKFTsASDVWSyGIVm 824 (996)
T KOG0196|consen 786 ----------------------EAAYTTLG----------GKI---------PIRWTAPEAIAYRKFTSASDVWSYGIVM 824 (996)
T ss_pred ----------------------CccccccC----------Ccc---------ceeecChhHhhhcccCchhhccccceEE
Confidence 00011111 111 4579999999999999999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcC-CCCccccccCchHH-HHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFC----PFSTGEEKTRTMSSLRHR-VLPPQLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~-~~p~~~~~~~p~~~-~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
||.++ ||...... ..++.+..+ .+||.. .+|... .|+++||++|-.+||++.+|+.
T Consensus 825 WEVmSyGERPYWdmSNQ-dVIkaIe~gyRLPpPm--DCP~aL~qLMldCWqkdR~~RP~F~qiV~ 886 (996)
T KOG0196|consen 825 WEVMSYGERPYWDMSNQ-DVIKAIEQGYRLPPPM--DCPAALYQLMLDCWQKDRNRRPKFAQIVS 886 (996)
T ss_pred EEecccCCCcccccchH-HHHHHHHhccCCCCCC--CCcHHHHHHHHHHHHHHhhcCCCHHHHHH
Confidence 99998 88877666 445555544 344432 455554 9999999999999999999986
No 388
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.92 E-value=1.9e-25 Score=237.35 Aligned_cols=204 Identities=17% Similarity=0.262 Sum_probs=153.4
Q ss_pred hhhhhcccCC------CCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCC--CCCHHHHHHHHHHHHHHHHHH
Q 004989 66 SDGVELTHGD------HLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKR--SVDVYECLHIFRQIVEIVYAA 137 (720)
Q Consensus 66 ~e~~~L~~l~------HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~--~l~~~~~~~i~~QIl~aL~yL 137 (720)
+|..||.+|+ --|+|+||..|+. ..++|||+|-...+|+++|++.+. .|....++.|+.|++.||..|
T Consensus 477 ~EleiLkKL~~AD~Edk~Hclrl~r~F~h----knHLClVFE~LslNLRevLKKyG~nvGL~ikaVRsYaqQLflALklL 552 (752)
T KOG0670|consen 477 KELEILKKLNDADPEDKFHCLRLFRHFKH----KNHLCLVFEPLSLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLL 552 (752)
T ss_pred HHHHHHHHhhccCchhhhHHHHHHHHhhh----cceeEEEehhhhchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHH
Confidence 5667888776 3478898884433 337899999988899999976554 378889999999999999999
Q ss_pred HHCCceeccCCCCcEEEcc-CCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCC
Q 004989 138 HSQGIVVHNVRPSCFVMSS-FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 216 (720)
Q Consensus 138 Hs~gIvHrDLKP~NILl~~-~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~ 216 (720)
-..||+|.||||+|||++. .+.+||||||.|...+...+
T Consensus 553 K~c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~enei---------------------------------------- 592 (752)
T KOG0670|consen 553 KKCGVLHADIKPDNILVNESKNILKLCDFGSASFASENEI---------------------------------------- 592 (752)
T ss_pred HhcCeeecccCccceEeccCcceeeeccCccccccccccc----------------------------------------
Confidence 9999999999999999995 45689999998855433321
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchh
Q 004989 217 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYR 296 (720)
Q Consensus 217 ~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwS 296 (720)
++++-+..|.|||++.|.+|++..|+||
T Consensus 593 ----------------------------------------------------tPYLVSRFYRaPEIiLG~~yd~~iD~WS 620 (752)
T KOG0670|consen 593 ----------------------------------------------------TPYLVSRFYRAPEIILGLPYDYPIDTWS 620 (752)
T ss_pred ----------------------------------------------------cHHHHHHhccCcceeecCcccCCcccee
Confidence 1235577899999999999999999999
Q ss_pred hhchhhhcccc---CCCCchH--HHHHHHhhcCCCCcc------------------------------------------
Q 004989 297 LGVLLFELFCP---FSTGEEK--TRTMSSLRHRVLPPQ------------------------------------------ 329 (720)
Q Consensus 297 LGvll~eLltp---f~~~~~~--~~~~~~l~~~~~p~~------------------------------------------ 329 (720)
+||+||||.|+ |++.... ...+..+. +.+|..
T Consensus 621 vgctLYElYtGkIlFpG~TNN~MLrl~me~K-Gk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtk 699 (752)
T KOG0670|consen 621 VGCTLYELYTGKILFPGRTNNQMLRLFMELK-GKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTK 699 (752)
T ss_pred eceeeEEeeccceecCCCCcHHHHHHHHHhc-CCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcch
Confidence 99999999993 5543222 11111111 111100
Q ss_pred -ccc------cCc--------hHHHHHHHcCCCCCCCCCChHHHHcCcccCC
Q 004989 330 -LLL------KFP--------KEASFCLWLLHPEPSGRPKMGELLQSEFLNE 366 (720)
Q Consensus 330 -~~~------~~p--------~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~ 366 (720)
+.. .+| ...+|+..||..||++|.|..++|.||||+.
T Consensus 700 dl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~HpFi~~ 751 (752)
T KOG0670|consen 700 DLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQALKHPFITE 751 (752)
T ss_pred hHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHHHHhcCCcccC
Confidence 000 011 1238999999999999999999999999985
No 389
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=99.92 E-value=1e-25 Score=242.38 Aligned_cols=205 Identities=16% Similarity=0.154 Sum_probs=154.2
Q ss_pred hhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCC-CCHHHHHHHHHHHHHHHHHHHH
Q 004989 62 LRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRS-VDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 62 ~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~-l~~~~~~~i~~QIl~aL~yLHs 139 (720)
+-..+|+.+|++++|||||++++++..++ ++++++|| ..|+|.+||.++..+ +.-.....|+.||+.|++||.+
T Consensus 580 ~~F~kEIkiLsqLkhPNIveLvGVC~~De----PicmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes 655 (807)
T KOG1094|consen 580 NDFLKEIKILSRLKHPNIVELLGVCVQDD----PLCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLES 655 (807)
T ss_pred HHHHHHHHHHhccCCCCeeEEEeeeecCC----chHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHh
Confidence 34448899999999999999999555555 57999999 889999999555333 3556677799999999999999
Q ss_pred CCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCC
Q 004989 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
.++|||||.+.|+|++.++++||+|||.++..-. +|+
T Consensus 656 ~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lys----------------------------------g~y--------- 692 (807)
T KOG1094|consen 656 LNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYS----------------------------------GDY--------- 692 (807)
T ss_pred hchhhccccccceeecCcccEEecCccccccccc----------------------------------CCc---------
Confidence 9999999999999999999999999988853211 111
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhc
Q 004989 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
.+. +...+-...|||||.+.-++++++||+|+|||
T Consensus 693 -------------------------y~v--------------------qgr~vlpiRwmawEsillgkFttaSDvWafgv 727 (807)
T KOG1094|consen 693 -------------------------YRV--------------------QGRAVLPIRWMAWESILLGKFTTASDVWAFGV 727 (807)
T ss_pred -------------------------eee--------------------ecceeeeeeehhHHHHHhccccchhhhhhhHH
Confidence 000 00123367899999999899999999999999
Q ss_pred hhhhccc-----cCCCCchHHHHHHHhh----cCCC--CccccccCchHH-HHHHHcCCCCCCCCCChHHHH
Q 004989 300 LLFELFC-----PFSTGEEKTRTMSSLR----HRVL--PPQLLLKFPKEA-SFCLWLLHPEPSGRPKMGELL 359 (720)
Q Consensus 300 ll~eLlt-----pf~~~~~~~~~~~~l~----~~~~--p~~~~~~~p~~~-~Li~~~L~~dP~~Rpta~eiL 359 (720)
++||+++ ||...... ....+.. ++.. -+..+..+|... +++.+||..|-++||+.+++.
T Consensus 728 TlwE~~~~C~e~Py~~lt~e-~vven~~~~~~~~~~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh 798 (807)
T KOG1094|consen 728 TLWEVFMLCREQPYSQLTDE-QVVENAGEFFRDQGRQVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLH 798 (807)
T ss_pred HHHHHHHHHhhCchhhhhHH-HHHHhhhhhcCCCCcceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHH
Confidence 9999998 87764332 2222221 1111 111223445444 999999999999999999984
No 390
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.91 E-value=4.5e-25 Score=215.74 Aligned_cols=159 Identities=18% Similarity=0.211 Sum_probs=122.2
Q ss_pred CCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCccccccccc
Q 004989 105 VSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQN 184 (720)
Q Consensus 105 gsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~ 184 (720)
|+|.+++...+..+++.+++.|+.||+.||.|||+++ ||+|||++.++.+++ ||.+...+..
T Consensus 1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~~~~~--fG~~~~~~~~---------- 62 (176)
T smart00750 1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWDGLLKL--DGSVAFKTPE---------- 62 (176)
T ss_pred CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCccceee--ccceEeeccc----------
Confidence 6899999765667999999999999999999999998 999999999999998 8876321100
Q ss_pred ccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCC
Q 004989 185 METKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPF 264 (720)
Q Consensus 185 ~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~ 264 (720)
T Consensus 63 -------------------------------------------------------------------------------- 62 (176)
T smart00750 63 -------------------------------------------------------------------------------- 62 (176)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CccccccccCCcccCcccccCCCCCccccchhhhchhhhccc---cCCCCchHHHHHHHhhcCCCCc-----cccccCc-
Q 004989 265 PMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPP-----QLLLKFP- 335 (720)
Q Consensus 265 ~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~-----~~~~~~p- 335 (720)
...||+.|+|||++.+..++.++|||||||++|||++ ||............+.....+. ......+
T Consensus 63 -----~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (176)
T smart00750 63 -----QSRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSA 137 (176)
T ss_pred -----cCCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHh
Confidence 0246899999999999999999999999999999999 6654333222333332221111 1111222
Q ss_pred --hHHHHHHHcCCCCCCCCCChHHHHcCcccCC
Q 004989 336 --KEASFCLWLLHPEPSGRPKMGELLQSEFLNE 366 (720)
Q Consensus 336 --~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~ 366 (720)
...+|+.+||..+|.+||++.|+++|+|+..
T Consensus 138 ~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~ 170 (176)
T smart00750 138 ARSFADFMRVCASRLPQRREAANHYLAHCRALF 170 (176)
T ss_pred hhhHHHHHHHHHhcccccccCHHHHHHHHHHHH
Confidence 3569999999999999999999999998753
No 391
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.91 E-value=3.6e-24 Score=240.85 Aligned_cols=212 Identities=17% Similarity=0.173 Sum_probs=141.1
Q ss_pred hhhhhcccCCCCCc-----eecccceeecC----CCCCcEEEEEec-CCCCHHHHHhCCC--------------------
Q 004989 66 SDGVELTHGDHLRN-----QGGLSGVCENE----AAIDPFVHAIEW-GDVSLRQWLDKPK-------------------- 115 (720)
Q Consensus 66 ~e~~~L~~l~HpnI-----V~l~~~~~~~~----~~~~~~~lv~E~-~ggsL~~~L~~~~-------------------- 115 (720)
.|..++.++.|.++ +++++.+.... ......++|||| .+++|.++|....
T Consensus 221 vE~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~ 300 (507)
T PLN03224 221 VEAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDN 300 (507)
T ss_pred HHHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhh
Confidence 45566667766655 56666222111 112347999999 9999999985321
Q ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCC
Q 004989 116 ---RSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSS 192 (720)
Q Consensus 116 ---~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~ 192 (720)
..+++..++.++.||+.+|.|||+++|+||||||+|||++.++.++|+|||++.......
T Consensus 301 ~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~----------------- 363 (507)
T PLN03224 301 MPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGI----------------- 363 (507)
T ss_pred cccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCCcEEEEeCcCccccccCC-----------------
Confidence 123567788999999999999999999999999999999999999999999874321100
Q ss_pred CCchhhhhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccc
Q 004989 193 PLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLM 272 (720)
Q Consensus 193 ~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~ 272 (720)
.+ ......
T Consensus 364 ----------------~~--------------------------------------------------------~~~~g~ 371 (507)
T PLN03224 364 ----------------NF--------------------------------------------------------NPLYGM 371 (507)
T ss_pred ----------------cc--------------------------------------------------------CccccC
Confidence 00 000024
Q ss_pred cCCcccCcccccCCC--------------------CC--ccccchhhhchhhhccccCC-CCch---H---H-------H
Q 004989 273 ETNWYASPEELAGAP--------------------VS--CASDIYRLGVLLFELFCPFS-TGEE---K---T-------R 316 (720)
Q Consensus 273 GT~~Y~APE~l~~~~--------------------~s--~~sDIwSLGvll~eLltpf~-~~~~---~---~-------~ 316 (720)
+|+.|+|||++.... |+ ...||||+||++|+|++|.. +... . . .
T Consensus 372 ~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~ 451 (507)
T PLN03224 372 LDPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLN 451 (507)
T ss_pred CCcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHH
Confidence 588999999985432 11 24799999999999998432 1110 0 0 0
Q ss_pred HHHHhhcCCCC-ccccccCchHHHHHHHcCCCCC---CCCCChHHHHcCcccCC
Q 004989 317 TMSSLRHRVLP-PQLLLKFPKEASFCLWLLHPEP---SGRPKMGELLQSEFLNE 366 (720)
Q Consensus 317 ~~~~l~~~~~p-~~~~~~~p~~~~Li~~~L~~dP---~~Rpta~eiL~hp~~~~ 366 (720)
.+.......+. +.+....+...+|+.+||..+| .+|+|+.|+|+||||..
T Consensus 452 ~~r~~~~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f~~ 505 (507)
T PLN03224 452 RWRMYKGQKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRFFLP 505 (507)
T ss_pred HHHhhcccCCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCCcCC
Confidence 01111111111 1122233445699999999766 68999999999999975
No 392
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.91 E-value=7.2e-25 Score=230.31 Aligned_cols=206 Identities=15% Similarity=0.190 Sum_probs=151.5
Q ss_pred hhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH-----
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS----- 139 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs----- 139 (720)
+|+.----|+|+||+.+++.=..+.....++|||.+| +.|||.|||... .++.....+++..++.||+|||-
T Consensus 254 tEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLvTdYHe~GSL~DyL~r~--tv~~~~ml~LalS~AsGLaHLH~eI~GT 331 (513)
T KOG2052|consen 254 TEIYQTVMLRHENILGFIAADNKDNGSWTQLWLVTDYHEHGSLYDYLNRN--TVTTEGMLKLALSIASGLAHLHMEIVGT 331 (513)
T ss_pred HHHHHHHHhccchhhhhhhccccCCCceEEEEEeeecccCCcHHHHHhhc--cCCHHHHHHHHHHHhhhHHHHHHHHhcC
Confidence 3333333488999999999655666667789999999 999999999663 39999999999999999999994
Q ss_pred ---CCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCC
Q 004989 140 ---QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 216 (720)
Q Consensus 140 ---~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~ 216 (720)
-.|+|||||..|||+..+|...|+|+|+|.....+.
T Consensus 332 qgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~h~~~t----------------------------------------- 370 (513)
T KOG2052|consen 332 QGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSDT----------------------------------------- 370 (513)
T ss_pred CCCchhhccccccccEEEccCCcEEEeeceeeEEecccC-----------------------------------------
Confidence 359999999999999999999999998884332210
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC------CCc
Q 004989 217 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP------VSC 290 (720)
Q Consensus 217 ~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~------~s~ 290 (720)
...+......+||..|||||+|...- .-.
T Consensus 371 ---------------------------------------------~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk 405 (513)
T KOG2052|consen 371 ---------------------------------------------DTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYK 405 (513)
T ss_pred ---------------------------------------------CcccCCCCCccceeeccChHHhhhhcChhhhhhhh
Confidence 00111223369999999999996543 234
Q ss_pred cccchhhhchhhhccc-------------cCCCC---chHHHHHH-HhhcCCCCccccccC---ch---HHHHHHHcCCC
Q 004989 291 ASDIYRLGVLLFELFC-------------PFSTG---EEKTRTMS-SLRHRVLPPQLLLKF---PK---EASFCLWLLHP 347 (720)
Q Consensus 291 ~sDIwSLGvll~eLlt-------------pf~~~---~~~~~~~~-~l~~~~~p~~~~~~~---p~---~~~Li~~~L~~ 347 (720)
.+||||||.++||+.. ||... ++..+.|. .+.-+.+.|.+++.| |. ...+++.||..
T Consensus 406 ~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~ 485 (513)
T KOG2052|consen 406 RADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYA 485 (513)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcC
Confidence 6899999999999986 66543 23333332 233334444444433 22 23899999999
Q ss_pred CCCCCCChHHHH
Q 004989 348 EPSGRPKMGELL 359 (720)
Q Consensus 348 dP~~Rpta~eiL 359 (720)
||..|.||-.|.
T Consensus 486 Np~aRltALriK 497 (513)
T KOG2052|consen 486 NPAARLTALRIK 497 (513)
T ss_pred CchhhhHHHHHH
Confidence 999999876553
No 393
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.91 E-value=1.1e-24 Score=238.33 Aligned_cols=207 Identities=16% Similarity=0.145 Sum_probs=164.1
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
.+|+.+|.+|+|||+|+|||++.. . ...+|||+ ..|+|.+.|++ ....|.......|+.||+.|+.||.++++
T Consensus 159 lrEas~M~~L~H~hliRLyGvVl~-q----p~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrl 233 (1039)
T KOG0199|consen 159 LREASHMLKLQHPHLIRLYGVVLD-Q----PAMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRL 233 (1039)
T ss_pred HHHHHHHHhccCcceeEEeeeecc-c----hhhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhh
Confidence 377889999999999999995554 3 36899999 99999999965 55568888999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
|||||-..|+|+-....|||+|||+.+..|..+-... |
T Consensus 234 vHRDLAARNlllasprtVKI~DFGLmRaLg~ned~Yv------------------------------m------------ 271 (1039)
T KOG0199|consen 234 VHRDLAARNLLLASPRTVKICDFGLMRALGENEDMYV------------------------------M------------ 271 (1039)
T ss_pred hhhhhhhhhheecccceeeeecccceeccCCCCcceE------------------------------e------------
Confidence 9999999999999999999999998876544311000 0
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
+ .. ..-...|+|||.|+...++.+||+|++||++|
T Consensus 272 ----------------------------~------p~-----------rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiW 306 (1039)
T KOG0199|consen 272 ----------------------------A------PQ-----------RKVPFAWCAPESLRHRKFSHASDVWMYGVTIW 306 (1039)
T ss_pred ----------------------------c------CC-----------CcCcccccCHhHhccccccccchhhhhhhhHH
Confidence 0 00 11245699999999999999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004989 303 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
||++ ||.+.... .++..+..+..-+.......+..++++.||..+|.+|||+..|...-+.
T Consensus 307 EMFtyGEePW~G~~g~-qIL~~iD~~erLpRPk~csedIY~imk~cWah~paDRptFsair~~~~l 371 (1039)
T KOG0199|consen 307 EMFTYGEEPWVGCRGI-QILKNIDAGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDLVL 371 (1039)
T ss_pred hhhccCCCCCCCCCHH-HHHHhccccccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHhHHH
Confidence 9999 77776554 5666666655544444444455599999999999999999988754333
No 394
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.91 E-value=7.2e-25 Score=235.77 Aligned_cols=147 Identities=24% Similarity=0.352 Sum_probs=128.1
Q ss_pred hhhhhcccCC---CCCceecccceeecCCCCCcEEEEEec--CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 66 SDGVELTHGD---HLRNQGGLSGVCENEAAIDPFVHAIEW--GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 66 ~e~~~L~~l~---HpnIV~l~~~~~~~~~~~~~~~lv~E~--~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
.|+.||+.++ |+||+++++ +|+++. ++|++||. .|.+|.++|..+. .++|.++..||+||+.|+++||++
T Consensus 615 ~EIqIla~l~~~sH~NIlKlLd-fFEddd---~yyl~te~hg~gIDLFd~IE~kp-~m~E~eAk~IFkQV~agi~hlh~~ 689 (772)
T KOG1152|consen 615 SEIQILATLNKHSHENILKLLD-FFEDDD---YYYLETEVHGEGIDLFDFIEFKP-RMDEPEAKLIFKQVVAGIKHLHDQ 689 (772)
T ss_pred hhHHHHHHhhhcCccchhhhhh-eeecCC---eeEEEecCCCCCcchhhhhhccC-ccchHHHHHHHHHHHhcccccccc
Confidence 7888999998 999999999 888775 68999998 8899999995444 499999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||||||||-+|+.++.+|-+||||||.+.-. +-+.|
T Consensus 690 ~ivhrdikdenvivd~~g~~klidfgsaa~~----------------------------------ksgpf---------- 725 (772)
T KOG1152|consen 690 GIVHRDIKDENVIVDSNGFVKLIDFGSAAYT----------------------------------KSGPF---------- 725 (772)
T ss_pred CceecccccccEEEecCCeEEEeeccchhhh----------------------------------cCCCc----------
Confidence 9999999999999999999999999987321 00122
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCC-Cccccchhhhc
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYRLGV 299 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~-s~~sDIwSLGv 299 (720)
...+||..|.|||++.|.+| +..-|||+||+
T Consensus 726 ------------------------------------------------d~f~gtv~~aapevl~g~~y~gk~qdiwalgi 757 (772)
T KOG1152|consen 726 ------------------------------------------------DVFVGTVDYAAPEVLGGEKYLGKPQDIWALGI 757 (772)
T ss_pred ------------------------------------------------ceeeeeccccchhhhCCCccCCCcchhhhhhh
Confidence 12589999999999999986 88899999999
Q ss_pred hhhhccc---cCC
Q 004989 300 LLFELFC---PFS 309 (720)
Q Consensus 300 ll~eLlt---pf~ 309 (720)
+||.++. ||.
T Consensus 758 llytivykenpyy 770 (772)
T KOG1152|consen 758 LLYTIVYKENPYY 770 (772)
T ss_pred eeeEEEeccCCCc
Confidence 9999887 664
No 395
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.90 E-value=4.5e-24 Score=262.55 Aligned_cols=192 Identities=17% Similarity=0.213 Sum_probs=140.5
Q ss_pred hhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH---HCC
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAH---SQG 141 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLH---s~g 141 (720)
.|..++.+++|||||++++ ++.+.. ..|+|||| .+++|.++++. +++..+..|+.||+.||+||| +.+
T Consensus 732 ~~~~~l~~l~HpnIv~~~~-~~~~~~---~~~lv~Ey~~~g~L~~~l~~----l~~~~~~~i~~~ia~~L~yLH~~~~~~ 803 (968)
T PLN00113 732 SEIADMGKLQHPNIVKLIG-LCRSEK---GAYLIHEYIEGKNLSEVLRN----LSWERRRKIAIGIAKALRFLHCRCSPA 803 (968)
T ss_pred HHHHHHhhCCCCCcceEEE-EEEcCC---CCEEEEeCCCCCcHHHHHhc----CCHHHHHHHHHHHHHHHHHhccCCCCC
Confidence 4577899999999999999 555443 46999999 89999999942 889999999999999999999 679
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++..++. |+..... .
T Consensus 804 iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~------------------------------------------~------- 833 (968)
T PLN00113 804 VVVGNLSPEKIIIDGKDEPHLR-LSLPGLL------------------------------------------C------- 833 (968)
T ss_pred eecCCCCHHhEEECCCCceEEE-ecccccc------------------------------------------c-------
Confidence 9999999999999988777763 3221000 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......||+.|+|||++.+..++.++|||||||++
T Consensus 834 ---------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl 868 (968)
T PLN00113 834 ---------------------------------------------TDTKCFISSAYVAPETRETKDITEKSDIYGFGLIL 868 (968)
T ss_pred ---------------------------------------------cCCCccccccccCcccccCCCCCcccchhhHHHHH
Confidence 00012578999999999988899999999999999
Q ss_pred hhccc---cCCCCch----HHHHHH-Hhhc----CCCCcccc-------ccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFC---PFSTGEE----KTRTMS-SLRH----RVLPPQLL-------LKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt---pf~~~~~----~~~~~~-~l~~----~~~p~~~~-------~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||..... ...... .... ....+.+. .......+++.+||+.||++|||+.|+++
T Consensus 869 ~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~ 946 (968)
T PLN00113 869 IELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLK 946 (968)
T ss_pred HHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHH
Confidence 99999 5532211 100000 0000 01111111 11122348999999999999999999986
No 396
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=99.90 E-value=2.7e-24 Score=227.51 Aligned_cols=233 Identities=13% Similarity=0.119 Sum_probs=161.7
Q ss_pred ccccccccCCCCCCcccccccccCCCCccchhhchhhhhhcccCCCCCceecccceeecC-CCCCcEEEEEec-CCCCHH
Q 004989 31 ALNISGVSDRNPRLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENE-AAIDPFVHAIEW-GDVSLR 108 (720)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~-~~~~~~~lv~E~-~ggsL~ 108 (720)
+||.--...-+.+.++++.|... +...|..|+++.-+-.+.|+||+++++ .-+.. .....++||+|| ..|+|.
T Consensus 222 rfg~V~KaqL~~~~VAVKifp~~----~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~-~ekr~t~~~~eywLVt~fh~kGsL~ 296 (534)
T KOG3653|consen 222 RFGCVWKAQLDNRLVAVKIFPEQ----EKQSFQNEKNIYSLPGMKHENILQFIG-AEKRGTADRMEYWLVTEFHPKGSLC 296 (534)
T ss_pred ccceeehhhccCceeEEEecCHH----HHHHHHhHHHHHhccCccchhHHHhhc-hhccCCccccceeEEeeeccCCcHH
Confidence 34433333345566665544332 234456667777778899999999999 22222 123468999999 999999
Q ss_pred HHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH---------CCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccc
Q 004989 109 QWLDKPKRSVDVYECLHIFRQIVEIVYAAHS---------QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEG 179 (720)
Q Consensus 109 ~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs---------~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~ 179 (720)
+||..+. +++.+..+|+..+++||+|||+ ..|+|||||..|||+..+++..|+|||++..+......
T Consensus 297 dyL~~nt--isw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~~~p~~~~-- 372 (534)
T KOG3653|consen 297 DYLKANT--ISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALRLEPGKPQ-- 372 (534)
T ss_pred HHHHhcc--ccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEEecCCCCC--
Confidence 9996654 8999999999999999999996 57999999999999999999999999988543211000
Q ss_pred cccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhc
Q 004989 180 LNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEE 259 (720)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~ 259 (720)
+|
T Consensus 373 ----------------------------~d-------------------------------------------------- 374 (534)
T KOG3653|consen 373 ----------------------------GD-------------------------------------------------- 374 (534)
T ss_pred ----------------------------cc--------------------------------------------------
Confidence 00
Q ss_pred ccCCCCccccccccCCcccCcccccCCC-C-----Cccccchhhhchhhhccc---------------cCCC---Cch-H
Q 004989 260 KKQPFPMKQILLMETNWYASPEELAGAP-V-----SCASDIYRLGVLLFELFC---------------PFST---GEE-K 314 (720)
Q Consensus 260 ~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~-----s~~sDIwSLGvll~eLlt---------------pf~~---~~~-~ 314 (720)
....+||..|||||+|.+.. + -.+.||||+|.+||||++ ||.. ..+ .
T Consensus 375 --------~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~ 446 (534)
T KOG3653|consen 375 --------THGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTL 446 (534)
T ss_pred --------hhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCCH
Confidence 01158999999999997764 2 247999999999999998 1221 111 1
Q ss_pred HHHHHHhhcCCCCccccccCc---h---HHHHHHHcCCCCCCCCCChHHH
Q 004989 315 TRTMSSLRHRVLPPQLLLKFP---K---EASFCLWLLHPEPSGRPKMGEL 358 (720)
Q Consensus 315 ~~~~~~l~~~~~p~~~~~~~p---~---~~~Li~~~L~~dP~~Rpta~ei 358 (720)
.++.....+....|.++..|- . ..+.+..||..||+.|.|+.=+
T Consensus 447 e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv 496 (534)
T KOG3653|consen 447 EEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCV 496 (534)
T ss_pred HHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHH
Confidence 222222223333344443332 2 2388999999999999997544
No 397
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.89 E-value=1.5e-23 Score=219.88 Aligned_cols=249 Identities=17% Similarity=0.217 Sum_probs=157.4
Q ss_pred hchhhhhhccc-CCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 63 RKHSDGVELTH-GDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~L~~-l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
|...|..+|.. ..+.||+++.+ ++...+ .+.+|||| +..+..+++.. ++..+++.|++.++.||.++|.+
T Consensus 80 ri~~El~~L~~~gG~~ni~~~~~-~~rnnd---~v~ivlp~~~H~~f~~l~~~----l~~~~i~~Yl~~ll~Al~~~h~~ 151 (418)
T KOG1167|consen 80 RILNELEMLYRLGGSDNIIKLNG-CFRNND---QVAIVLPYFEHDRFRDLYRS----LSLAEIRWYLRNLLKALAHLHKN 151 (418)
T ss_pred HHHHHHHHHHHhccchhhhcchh-hhccCC---eeEEEecccCccCHHHHHhc----CCHHHHHHHHHHHHHHhhhhhcc
Confidence 55566667777 45999999999 443333 68999999 88888888743 78999999999999999999999
Q ss_pred CceeccCCCCcEEEc-cCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCC
Q 004989 141 GIVVHNVRPSCFVMS-SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 141 gIvHrDLKP~NILl~-~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
|||||||||+|||.+ ..+.-.|+|||+|.......-. .+ .+ +.-++
T Consensus 152 GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~~~~----~~-----------------s~-----~~~~~------- 198 (418)
T KOG1167|consen 152 GIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGYQQT----EH-----------------SR-----SYSGR------- 198 (418)
T ss_pred CccccCCCccccccccccCCceEEechhHHHHHhhhhh----hh-----------------hh-----hhhcc-------
Confidence 999999999999998 5677899999999631111000 00 00 00000
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcc--cCCCCccccccccCCcccCcccccCCC-CCccccchh
Q 004989 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEK--KQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYR 296 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~--~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwS 296 (720)
+...+.|.. ....+... .+......+ ....+.......||++|+|||++...+ .++++||||
T Consensus 199 -------~~~~~~g~~------~~~~~~~~--~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws 263 (418)
T KOG1167|consen 199 -------HATPAMGKD------VHCQSVAT--ASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWS 263 (418)
T ss_pred -------cCCccccCc------cccccccc--ccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceee
Confidence 000000000 00000000 000000000 111222334578999999999998776 799999999
Q ss_pred hhchhhhccc---cCCCCchHHHHHHHh---------h-----cCC--C-------------------------C-----
Q 004989 297 LGVLLFELFC---PFSTGEEKTRTMSSL---------R-----HRV--L-------------------------P----- 327 (720)
Q Consensus 297 LGvll~eLlt---pf~~~~~~~~~~~~l---------~-----~~~--~-------------------------p----- 327 (720)
.|||+.-+++ ||........+...+ + .+. + +
T Consensus 264 ~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n 343 (418)
T KOG1167|consen 264 AGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPN 343 (418)
T ss_pred ccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccccc
Confidence 9999999998 764321111000000 0 000 0 0
Q ss_pred ---ccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 328 ---PQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 328 ---~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
.......| ...+|+.+||+.||.+|.||+++|.||||...
T Consensus 344 ~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~~~ 387 (418)
T KOG1167|consen 344 TEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFDEA 387 (418)
T ss_pred eeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCcch
Confidence 00011122 23499999999999999999999999999954
No 398
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.89 E-value=1.7e-23 Score=228.71 Aligned_cols=207 Identities=18% Similarity=0.233 Sum_probs=160.3
Q ss_pred hhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCcee
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|+.++...+|||||.||+.+...+ ..++.||| +||+|.+.- ....++++.++.++.+..+.||.|||++|=+|
T Consensus 61 qei~~~~dc~h~nivay~gsylr~d----klwicMEycgggslQdiy-~~TgplselqiayvcRetl~gl~ylhs~gk~h 135 (829)
T KOG0576|consen 61 QEIGMLRDCRHPNIVAYFGSYLRRD----KLWICMEYCGGGSLQDIY-HVTGPLSELQIAYVCRETLQGLKYLHSQGKIH 135 (829)
T ss_pred cceeeeecCCCcChHHHHhhhhhhc----CcEEEEEecCCCccccee-eecccchhHHHHHHHhhhhccchhhhcCCccc
Confidence 5667888899999999999443333 46999999 899999855 55566999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccc
Q 004989 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
||||-.|||+++.|.+|+.|||.+-+++.. +
T Consensus 136 RdiKGanilltd~gDvklaDfgvsaqitat-------------------------------------i------------ 166 (829)
T KOG0576|consen 136 RDIKGANILLTDEGDVKLADFGVSAQITAT-------------------------------------I------------ 166 (829)
T ss_pred ccccccceeecccCceeecccCchhhhhhh-------------------------------------h------------
Confidence 999999999999999999999987433211 0
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCccccc---CCCCCccccchhhhchh
Q 004989 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA---GAPVSCASDIYRLGVLL 301 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~---~~~~s~~sDIwSLGvll 301 (720)
.+.....|||+|||||+.. ...|...+|||++|+..
T Consensus 167 -----------------------------------------~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitA 205 (829)
T KOG0576|consen 167 -----------------------------------------AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITA 205 (829)
T ss_pred -----------------------------------------hhhhcccCCccccchhHHHHHhcccccccccccccccch
Confidence 0112258999999999873 34499999999999998
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccc--cCchHH-HHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL--KFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~--~~p~~~-~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
.||-- |.+...+....+..-..+.-||.+.. .|.... +|++.+|..+|++||+++.+|+|||+...
T Consensus 206 iel~eLqpplfdlhpmr~l~LmTkS~~qpp~lkDk~kws~~fh~fvK~altknpKkRptaeklL~h~fvs~~ 277 (829)
T KOG0576|consen 206 IELGELQPPLFDLHPMRALFLMTKSGFQPPTLKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQT 277 (829)
T ss_pred hhhhhcCCcccccchHHHHHHhhccCCCCCcccCCccchHHHHHHHHHHhcCCCccCCChhhheeceeeccc
Confidence 88876 43333333222222223344554433 444444 99999999999999999999999999987
No 399
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.89 E-value=2.9e-23 Score=198.55 Aligned_cols=167 Identities=17% Similarity=0.174 Sum_probs=130.4
Q ss_pred hchhhhhh-cccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHh---CCCCCCCHHHHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVE-LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLD---KPKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 63 r~~~e~~~-L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~---~~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
|.-+|..+ +.....|.+|.+||..+..+ .+++.||....+|..+.+ +.+..++|..+=+|+..|+.||.|||
T Consensus 90 r~L~dldi~~r~~~CPf~V~FyGa~~reg----dvwIcME~M~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~ 165 (282)
T KOG0984|consen 90 RLLMDLDIIMRTVDCPFTVHFYGALFREG----DVWICMELMDTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLH 165 (282)
T ss_pred HHHHhhhhhccCCCCCeEEEeehhhhccc----cEEEeHHHhhhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHH
Confidence 33344433 44578999999999666544 479999998889987762 35566999999999999999999999
Q ss_pred HC-CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCC
Q 004989 139 SQ-GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 139 s~-gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~ 217 (720)
++ .|||||+||+||||+..|+||+||||.+-.. .|- .|
T Consensus 166 ~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L------------------------------------~dS-iA---- 204 (282)
T KOG0984|consen 166 SKLSVIHRDVKPSNILINYDGQVKICDFGISGYL------------------------------------VDS-IA---- 204 (282)
T ss_pred HHhhhhhccCCcceEEEccCCcEEEcccccceee------------------------------------hhh-hH----
Confidence 85 8999999999999999999999999987211 010 00
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC----CCCcccc
Q 004989 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA----PVSCASD 293 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~----~~s~~sD 293 (720)
+. ...|...|||||.+... .|+-+||
T Consensus 205 ----------------------------kt----------------------~daGCkpYmaPEri~~e~n~~gY~vksD 234 (282)
T KOG0984|consen 205 ----------------------------KT----------------------MDAGCKPYMAPERINPELNQKGYSVKSD 234 (282)
T ss_pred ----------------------------HH----------------------HhcCCCccCChhhcCcccCcccceeehh
Confidence 01 12467889999998543 4999999
Q ss_pred chhhhchhhhccc---cCCCCchHHHHHHHhhcC
Q 004989 294 IYRLGVLLFELFC---PFSTGEEKTRTMSSLRHR 324 (720)
Q Consensus 294 IwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~ 324 (720)
|||||++++||.+ ||+.+.......+.+...
T Consensus 235 vWSLGItmiElA~lr~PY~~w~tpF~qLkqvVee 268 (282)
T KOG0984|consen 235 VWSLGITMIEMAILRFPYESWGTPFQQLKQVVEE 268 (282)
T ss_pred hhhhhhhhhhhhhccccccccCCHHHHHHHHhcC
Confidence 9999999999998 888887777777666544
No 400
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.88 E-value=1.5e-22 Score=235.01 Aligned_cols=202 Identities=17% Similarity=0.207 Sum_probs=160.0
Q ss_pred hhhhhccc-CCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC---------------CCCCHHHHHHHHH
Q 004989 66 SDGVELTH-GDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---------------RSVDVYECLHIFR 128 (720)
Q Consensus 66 ~e~~~L~~-l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~---------------~~l~~~~~~~i~~ 128 (720)
.|..+|.. ..|||||.+++ ++.. ...+++++|| ..|+|.++|++.. ..++..+...+..
T Consensus 350 ~El~~m~~~g~H~niv~llG-~~t~---~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~ 425 (609)
T KOG0200|consen 350 SELNVLKELGKHPNIVNLLG-ACTQ---DGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAY 425 (609)
T ss_pred HHHHHHHHhcCCcchhhhee-eecc---CCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHH
Confidence 66667777 55999999999 4433 2368999999 9999999996554 2488999999999
Q ss_pred HHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhccccc
Q 004989 129 QIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRRE 208 (720)
Q Consensus 129 QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~ 208 (720)
||+.|++||++..+|||||-..|||+..+..+|++|||++++......
T Consensus 426 QIa~GMe~L~~~~~vHRDLAaRNVLi~~~~~~kIaDFGlar~~~~~~~-------------------------------- 473 (609)
T KOG0200|consen 426 QIANGMEYLASVPCVHRDLAARNVLITKNKVIKIADFGLARDHYNKDY-------------------------------- 473 (609)
T ss_pred HHHHHHHHHhhCCccchhhhhhhEEecCCCEEEEccccceeccCCCCc--------------------------------
Confidence 999999999999999999999999999999999999998865322100
Q ss_pred ccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCcccccccc--CCcccCcccccCC
Q 004989 209 DLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLME--TNWYASPEELAGA 286 (720)
Q Consensus 209 Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~G--T~~Y~APE~l~~~ 286 (720)
+ -+ .+ -.| ...|||||.+...
T Consensus 474 -y-~~------------------------------------~~-------------------~~~~LP~kWmApEsl~~~ 496 (609)
T KOG0200|consen 474 -Y-RT------------------------------------KS-------------------SAGTLPVKWMAPESLFDR 496 (609)
T ss_pred -e-Ee------------------------------------cC-------------------CCCccceeecCHHHhccC
Confidence 0 00 00 011 2349999999998
Q ss_pred CCCccccchhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 287 PVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 287 ~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
.|+.++||||+||+|||+++ ||++.......+..++.+...+......++..++++.||+.+|++||+..++.+
T Consensus 497 ~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~~l~~~l~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~ 574 (609)
T KOG0200|consen 497 VFTSKSDVWSFGILLWEIFTLGGTPYPGIPPTEELLEFLKEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVE 574 (609)
T ss_pred cccccchhhHHHHHHHHHhhCCCCCCCCCCcHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHH
Confidence 89999999999999999999 888755344556677777666555555555569999999999999999999874
No 401
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.88 E-value=1.8e-23 Score=225.51 Aligned_cols=183 Identities=28% Similarity=0.459 Sum_probs=154.3
Q ss_pred cEEEEEec-CCCCHHHHHh--CCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCC
Q 004989 95 PFVHAIEW-GDVSLRQWLD--KPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDS 171 (720)
Q Consensus 95 ~~~lv~E~-~ggsL~~~L~--~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~ 171 (720)
++|+.|++ .-.+|.+||+ ......+...++.++.|++.|++| +|.+|||+||.||++..+.++||.|||+....
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~~d~q~kIgDFgl~ts~ 406 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFSDDDQLKIGDFGLVTSQ 406 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhccccccccccchhhhhhhhhheeec
Confidence 58999999 8889999994 344457888999999999999999 99999999999999998888988777665321
Q ss_pred CCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccc
Q 004989 172 GSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNR 251 (720)
Q Consensus 172 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g 251 (720)
... . +...++
T Consensus 407 ~~~---------------------------------------------~------~~~~~~------------------- 416 (516)
T KOG1033|consen 407 DKD---------------------------------------------E------TVAPAA------------------- 416 (516)
T ss_pred ccC---------------------------------------------C------cccchh-------------------
Confidence 111 0 000000
Q ss_pred cchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhccccCCCCchHHHHHHHhhcCCCCcccc
Q 004989 252 VNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRVLPPQLL 331 (720)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLltpf~~~~~~~~~~~~l~~~~~p~~~~ 331 (720)
...+..+||.|||+||++.+..|+.++||||||+|||||+.+|....+...++.+++++++||.+.
T Consensus 417 --------------a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er~~t~~d~r~g~ip~~~~ 482 (516)
T KOG1033|consen 417 --------------ASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFERIATLTDIRDGIIPPEFL 482 (516)
T ss_pred --------------hhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHHHHhhhhhhcCCCChHHh
Confidence 012336899999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCchHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004989 332 LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 332 ~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
..+|.+.+|+.+||++.|.+||++.+.--|+|.
T Consensus 483 ~d~p~e~~ll~~lls~~p~~RP~~~~~~~~~~~ 515 (516)
T KOG1033|consen 483 QDYPEEYTLLQQLLSPSPEERPSAIEVALHEFL 515 (516)
T ss_pred hcCcHHHHHHHHhcCCCcccCchHHHHhhhhhc
Confidence 999999999999999999999988777767664
No 402
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.87 E-value=1.5e-22 Score=224.97 Aligned_cols=239 Identities=15% Similarity=0.077 Sum_probs=173.8
Q ss_pred CCcccccccccCCCCCCcccccc----cccCCCCccchhhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-
Q 004989 28 SSRALNISGVSDRNPRLLRGERF----GVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW- 102 (720)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~r~----~~~~~~~~~~~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~- 102 (720)
++++||+-..+.+-|+...++-- ++....+..+....-.|+.+|++++|||+++|++ ++.... +.||++|
T Consensus 705 GsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLg-vc~~s~----~qlvtq~m 779 (1177)
T KOG1025|consen 705 GSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLG-VCMLST----LQLVTQLM 779 (1177)
T ss_pred ccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhh-hcccch----HHHHHHhc
Confidence 34555554444455553221111 1223333333333448899999999999999999 554442 5789999
Q ss_pred CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCccccccc
Q 004989 103 GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNT 182 (720)
Q Consensus 103 ~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~ 182 (720)
++|+|.++++.+...+.....+.|..||+.|+.|||.+++|||||-..|||+...+++|+.|||+++....+..+..
T Consensus 780 P~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ey~--- 856 (1177)
T KOG1025|consen 780 PLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKEYS--- 856 (1177)
T ss_pred ccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCCeEEEEecchhhccCccccccc---
Confidence 99999999987777799999999999999999999999999999999999999999999999998865444322100
Q ss_pred ccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccC
Q 004989 183 QNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQ 262 (720)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~ 262 (720)
++.
T Consensus 857 -----------------------------------------------------------------~~~------------ 859 (1177)
T KOG1025|consen 857 -----------------------------------------------------------------APG------------ 859 (1177)
T ss_pred -----------------------------------------------------------------ccc------------
Confidence 000
Q ss_pred CCCccccccccCCcccCcccccCCCCCccccchhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHH
Q 004989 263 PFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEA 338 (720)
Q Consensus 263 ~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~ 338 (720)
..-.+.|||-|.+....|+.++||||+||++|||+| |+.+.... ++-..+..+..-+..+...-+..
T Consensus 860 --------gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~-eI~dlle~geRLsqPpiCtiDVy 930 (1177)
T KOG1025|consen 860 --------GKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAE-EIPDLLEKGERLSQPPICTIDVY 930 (1177)
T ss_pred --------cccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHH-HhhHHHhccccCCCCCCccHHHH
Confidence 011456899999999999999999999999999999 77765443 33344444433333323333455
Q ss_pred HHHHHcCCCCCCCCCChHHHHc
Q 004989 339 SFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 339 ~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
-++.+||..|+..||+++++..
T Consensus 931 ~~mvkCwmid~~~rp~fkel~~ 952 (1177)
T KOG1025|consen 931 MVMVKCWMIDADSRPTFKELAE 952 (1177)
T ss_pred HHHHHHhccCcccCccHHHHHH
Confidence 8999999999999999988864
No 403
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.87 E-value=1.3e-21 Score=193.66 Aligned_cols=176 Identities=27% Similarity=0.335 Sum_probs=145.0
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|...+..+.|++|+++++ .+... ...+++||+ .|++|.+++......++...++.++.+++.+|.+||+.|
T Consensus 37 ~~~~e~~~~~~l~~~~i~~~~~-~~~~~---~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 112 (215)
T cd00180 37 ELLREIEILKKLNHPNIVKLYG-VFEDE---NHLYLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNG 112 (215)
T ss_pred HHHHHHHHHHhcCCCCeeeEee-eeecC---CeEEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3446677899999999999999 44333 367999999 779999999654345899999999999999999999999
Q ss_pred ceeccCCCCcEEEcc-CCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 142 IVVHNVRPSCFVMSS-FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 142 IvHrDLKP~NILl~~-~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
++|+||+|.||+++. .+.++|+|||.+........
T Consensus 113 ~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~-------------------------------------------- 148 (215)
T cd00180 113 IIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS-------------------------------------------- 148 (215)
T ss_pred eeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc--------------------------------------------
Confidence 999999999999998 89999999988743211100
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC-CCCccccchhhhc
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGV 299 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGv 299 (720)
......+...|++||.+... .++.++|+|+||+
T Consensus 149 ----------------------------------------------~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~ 182 (215)
T cd00180 149 ----------------------------------------------LLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGV 182 (215)
T ss_pred ----------------------------------------------hhhcccCCCCccChhHhcccCCCCchhhhHHHHH
Confidence 00012457789999999887 6899999999999
Q ss_pred hhhhccccCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCc
Q 004989 300 LLFELFCPFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSE 362 (720)
Q Consensus 300 ll~eLltpf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp 362 (720)
++++| +...+++.+||..+|++||++.+++.++
T Consensus 183 ~~~~l------------------------------~~~~~~l~~~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 183 ILYEL------------------------------PELKDLIRKMLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred HHHHH------------------------------HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence 99998 4456999999999999999999999875
No 404
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.85 E-value=4.8e-21 Score=198.19 Aligned_cols=205 Identities=20% Similarity=0.234 Sum_probs=157.0
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHh-----C--CCCCCCHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLD-----K--PKRSVDVYECLHIFRQIVEIV 134 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~-----~--~~~~l~~~~~~~i~~QIl~aL 134 (720)
+.-.|...|-.+.|||++.+.++..++... -++.+.+ +-++|..||. . ..+.++..+...++.||+.|+
T Consensus 333 ~~L~es~lly~~sH~nll~V~~V~ie~~~~---P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am 409 (563)
T KOG1024|consen 333 LLLQESMLLYGASHPNLLSVLGVSIEDYAT---PFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAM 409 (563)
T ss_pred HHHHHHHHHhcCcCCCccceeEEEeeccCc---ceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHH
Confidence 444677778889999999999966665543 3677777 7789999995 2 233478888999999999999
Q ss_pred HHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhccccccccccc
Q 004989 135 YAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVT 214 (720)
Q Consensus 135 ~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~ 214 (720)
+|||++||||.||-..|.+|++.-+|||+|..++++.=. +|+-
T Consensus 410 ~hlh~~~ViHkDiAaRNCvIdd~LqVkltDsaLSRDLFP----------------------------------~DYh--- 452 (563)
T KOG1024|consen 410 EHLHNHGVIHKDIAARNCVIDDQLQVKLTDSALSRDLFP----------------------------------GDYH--- 452 (563)
T ss_pred HHHHhcCcccchhhhhcceehhheeEEeccchhccccCc----------------------------------cccc---
Confidence 999999999999999999999999999999998876311 1220
Q ss_pred CCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccc
Q 004989 215 APTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDI 294 (720)
Q Consensus 215 ~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDI 294 (720)
| +.|. .--...||+||.+....|+.++|+
T Consensus 453 ----------c---------------------LGDn--------------------EnRPvkWMslEal~n~~yssasDv 481 (563)
T KOG1024|consen 453 ----------C---------------------LGDN--------------------ENRPVKWMSLEALQNSHYSSASDV 481 (563)
T ss_pred ----------c---------------------cCCC--------------------CCCcccccCHHHHhhhhhcchhhh
Confidence 0 0000 011446999999999999999999
Q ss_pred hhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHH-HHHHHcCCCCCCCCCChHHHHc
Q 004989 295 YRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 295 wSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~-~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||||+||||+| |+...++. ++...+..+.. -..+..+|++. .++..||...|++||+.+++.+
T Consensus 482 WsfGVllWELmtlg~~PyaeIDPf-Em~~ylkdGyR-laQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~ 550 (563)
T KOG1024|consen 482 WSFGVLLWELMTLGKLPYAEIDPF-EMEHYLKDGYR-LAQPFNCPDELFTVMACCWALLPEERPSFSQLVI 550 (563)
T ss_pred HHHHHHHHHHHhcCCCCccccCHH-HHHHHHhccce-ecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHH
Confidence 999999999999 66655443 34444444432 22334677776 9999999999999999999875
No 405
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.83 E-value=3.8e-21 Score=220.84 Aligned_cols=213 Identities=17% Similarity=0.239 Sum_probs=156.3
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
...|..+-+.+.||||+..+..+++... .+..||| .+ +|..++... ..++..++..++.||+.||+|+|+.||
T Consensus 368 i~sE~~i~~~l~h~~~~e~l~~~~~~~~----~~~~mE~~~~-Dlf~~~~~~-~~~~~~e~~c~fKqL~~Gv~y~h~~Gi 441 (601)
T KOG0590|consen 368 ITSEFCIGSSLSHPNIIETLDIVQEIDG----ILQSMEYCPY-DLFSLVMSN-GKLTPLEADCFFKQLLRGVKYLHSMGL 441 (601)
T ss_pred hhhheeecccccCCchhhhHHHHhhccc----chhhhhcccH-HHHHHHhcc-cccchhhhhHHHHHHHHHHHHHHhcCc
Confidence 3467777788999999988884443332 2334999 55 999998554 348999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
.||||||+|+++...|.+|++|||.+..+-.+.-.
T Consensus 442 ahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~--------------------------------------------- 476 (601)
T KOG0590|consen 442 AHRDLKLENLLVTENGILKIIDFGAASVFRYPWEK--------------------------------------------- 476 (601)
T ss_pred eeccCccccEEEecCCceEEeecCcceeeccCcch---------------------------------------------
Confidence 99999999999999999999999998443221000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCc-cccchhhhchh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSC-ASDIYRLGVLL 301 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~-~sDIwSLGvll 301 (720)
... .....+|+..|+|||++.+..|.+ ..||||.|+++
T Consensus 477 ----------------------~~~-------------------~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~ 515 (601)
T KOG0590|consen 477 ----------------------NIH-------------------ESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIY 515 (601)
T ss_pred ----------------------hhh-------------------hhcCcccCCcCcCcccccccccCcchhhhhhccceE
Confidence 000 011258899999999999999865 78999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhh---cC---CCCccccccCchHH-HHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004989 302 FELFC---PFSTGEEKTRTMSSLR---HR---VLPPQLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~---~~---~~p~~~~~~~p~~~-~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
+.|.+ ||.........+.... +. .-+..++...|... .+|-+||++||.+|.|+++|++.+||+...
T Consensus 516 ~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~~i~ 592 (601)
T KOG0590|consen 516 ICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILNDEWIRSIE 592 (601)
T ss_pred EEEecCCCccccccccccchhhhccccccccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhhChHhhhcc
Confidence 99999 3332211111101111 11 11233444555554 899999999999999999999999999863
No 406
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.81 E-value=2.8e-20 Score=184.61 Aligned_cols=180 Identities=16% Similarity=0.206 Sum_probs=136.3
Q ss_pred CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEE
Q 004989 75 DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFV 153 (720)
Q Consensus 75 ~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NIL 153 (720)
.|.|||.-|++.|+..+ .++++||| +-|+|..-+...+ +.|...+.++.|++.|++|+|+.++||||||.+|||
T Consensus 79 ~H~hIi~tY~vaFqt~d---~YvF~qE~aP~gdL~snv~~~G--igE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiL 153 (378)
T KOG1345|consen 79 PHQHIIDTYEVAFQTSD---AYVFVQEFAPRGDLRSNVEAAG--IGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENIL 153 (378)
T ss_pred cchhhhHHHHHHhhcCc---eEEEeeccCccchhhhhcCccc--ccHHHHHHHHHHHHHHHHHhhccchhhcccccceEE
Confidence 49999999998887765 67899999 9999999774433 899999999999999999999999999999999999
Q ss_pred Ec--cCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCCCc
Q 004989 154 MS--SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSA 231 (720)
Q Consensus 154 l~--~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~ 231 (720)
|- +...|||||||.....|...-
T Consensus 154 if~~df~rvKlcDFG~t~k~g~tV~------------------------------------------------------- 178 (378)
T KOG1345|consen 154 IFDADFYRVKLCDFGLTRKVGTTVK------------------------------------------------------- 178 (378)
T ss_pred EecCCccEEEeeecccccccCceeh-------------------------------------------------------
Confidence 96 445789988887744322200
Q ss_pred cccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC-----CCccccchhhhchhhhccc
Q 004989 232 YGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-----VSCASDIYRLGVLLFELFC 306 (720)
Q Consensus 232 ~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-----~s~~sDIwSLGvll~eLlt 306 (720)
..-.+..|.+||++.... ..+.+|||.||+++|.+|+
T Consensus 179 --------------------------------------~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~clt 220 (378)
T KOG1345|consen 179 --------------------------------------YLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLT 220 (378)
T ss_pred --------------------------------------hhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeec
Confidence 011255689999874332 5889999999999999999
Q ss_pred cCCCCc------hHHHHHHHhh---cCCCCccccccCchHHHHHHHcCCCCCCCC
Q 004989 307 PFSTGE------EKTRTMSSLR---HRVLPPQLLLKFPKEASFCLWLLHPEPSGR 352 (720)
Q Consensus 307 pf~~~~------~~~~~~~~l~---~~~~p~~~~~~~p~~~~Li~~~L~~dP~~R 352 (720)
+-.++. .....+.... ...+|..+....+....+.++-|.++|++|
T Consensus 221 G~~PWQka~~~d~~Y~~~~~w~~rk~~~~P~~F~~fs~~a~r~Fkk~lt~~~~dr 275 (378)
T KOG1345|consen 221 GKFPWQKASIMDKPYWEWEQWLKRKNPALPKKFNPFSEKALRLFKKSLTPRFKDR 275 (378)
T ss_pred CCCcchhhhccCchHHHHHHHhcccCccCchhhcccCHHHHHHHHHhcCCccccc
Confidence 443331 1112222222 234566666677778899999999999999
No 407
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.80 E-value=2.4e-19 Score=186.14 Aligned_cols=229 Identities=17% Similarity=0.210 Sum_probs=151.3
Q ss_pred CCCcccccccccCCCCccchhhch-hhhhhcccCCCCCceecccceeecCC------------------------CCCcE
Q 004989 42 PRLLRGERFGVRGDDSNDFELRKH-SDGVELTHGDHLRNQGGLSGVCENEA------------------------AIDPF 96 (720)
Q Consensus 42 ~~~~~~~r~~~~~~~~~~~~~r~~-~e~~~L~~l~HpnIV~l~~~~~~~~~------------------------~~~~~ 96 (720)
.+.+|+.+....+++ +...||.- +..+.|. .|||||+++..|+. .. +...+
T Consensus 243 ~ElvPa~~~a~~~e~-~~~t~R~l~nqtvhLa--~HPNIvri~~aF~d-sv~~lPda~~~YPdalp~R~~p~g~g~~~tl 318 (598)
T KOG4158|consen 243 NELVPAPNAAKLLEG-QMGTFRPLPNQTVHLA--KHPNIVRIQTAFID-SVKVLPDAIERYPDALPARWYPSGAGEPKTL 318 (598)
T ss_pred hhccCcchhhhhccc-ccceeeeCCCCCcccC--CCCCEEeehhhhhh-hhccCCchhhhCcccccceecccccCCCceE
Confidence 334444444444333 23334443 4444444 59999999995542 21 12237
Q ss_pred EEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEc--cCC--ceEEeecCcccCCC
Q 004989 97 VHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMS--SFN--HVSFIESASCSDSG 172 (720)
Q Consensus 97 ~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~--~~~--~vkliDfg~a~~~g 172 (720)
|+||.-...+|+++|.... .+......|+.|+++|+.|||.+||.|||||.+|||+. +++ .+.+.|||+|-...
T Consensus 319 ylvMkrY~~tLr~yl~~~~--~s~r~~~~~laQlLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~ 396 (598)
T KOG4158|consen 319 YLVMKRYRQTLREYLWTRH--RSYRTGRVILAQLLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADD 396 (598)
T ss_pred EEehhcchhhHHHHHhcCC--CchHHHHHHHHHHHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccceeeecc
Confidence 9999987789999995544 67888899999999999999999999999999999995 333 47888888882211
Q ss_pred CCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCCCcccccccccccccccccccccc
Q 004989 173 SDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRV 252 (720)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~ 252 (720)
.- |...+. .....|
T Consensus 397 ~h----------------------------------------------------------Glqlpy-----~S~~Vd--- 410 (598)
T KOG4158|consen 397 NH----------------------------------------------------------GLQLPY-----ESDEVD--- 410 (598)
T ss_pred cc----------------------------------------------------------cccccc-----cccccc---
Confidence 10 000000 011122
Q ss_pred chhhhhcccCCCCccccccccCCcccCcccccCCC------CCccccchhhhchhhhccc---cCCCCchHHHHHHHhhc
Q 004989 253 NVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP------VSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRH 323 (720)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~------~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~ 323 (720)
.-|...-||||+....+ --.++|.|+.|.+.||+++ ||....+..-.....++
T Consensus 411 ------------------~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yqe 472 (598)
T KOG4158|consen 411 ------------------LGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQE 472 (598)
T ss_pred ------------------CCCcceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhhh
Confidence 23677889999986544 1347899999999999998 98874332222222444
Q ss_pred CCCCccccccCchHHHHHHHcCCCCCCCCCCh---HHHHc
Q 004989 324 RVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM---GELLQ 360 (720)
Q Consensus 324 ~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta---~eiL~ 360 (720)
..+|+-.....|...+++..+|++||++|++. +.+|+
T Consensus 473 ~qLPalp~~vpp~~rqlV~~lL~r~pskRvsp~iAANvl~ 512 (598)
T KOG4158|consen 473 SQLPALPSRVPPVARQLVFDLLKRDPSKRVSPNIAANVLN 512 (598)
T ss_pred hhCCCCcccCChHHHHHHHHHhcCCccccCCccHHHhHHH
Confidence 45555444444555699999999999999874 44554
No 408
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.79 E-value=6.5e-19 Score=177.63 Aligned_cols=170 Identities=25% Similarity=0.290 Sum_probs=131.4
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+...|...+.+++|+||+++++ .+... ...++++|+ .+++|.+++......+++..+..++.|++.+|.+||+.|
T Consensus 43 ~~~~e~~~~~~~~~~~i~~~~~-~~~~~---~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 118 (225)
T smart00221 43 EFLREIRILKKLKHPNIVKLYG-VFEDP---EPLYLVMEYCEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLG 118 (225)
T ss_pred HHHHHHHHHHhCCCCChhhhee-eeecC---CceEEEEeccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3346667888899999999999 44433 257999999 777999999544333899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
++|+||+|+||+++.++.++|+|||.+....... .+
T Consensus 119 i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~--------------------------------~~------------ 154 (225)
T smart00221 119 IVHRDLKPENILLGMDGLVKLADFGLARFIHRDL--------------------------------AA------------ 154 (225)
T ss_pred eecCCCCHHHEEEcCCCCEEEeeCceeeEecCcc--------------------------------cc------------
Confidence 9999999999999999999999998874321110 00
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccc-cCCCCCccccchhhhch
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEEL-AGAPVSCASDIYRLGVL 300 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l-~~~~~s~~sDIwSLGvl 300 (720)
......++..|++||.+ ....++.++|||+||++
T Consensus 155 ---------------------------------------------~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~ 189 (225)
T smart00221 155 ---------------------------------------------LLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVI 189 (225)
T ss_pred ---------------------------------------------cccceeccCCcCCHhHhcCCCCCCchhhHHHHHHH
Confidence 00013567889999998 55568889999999999
Q ss_pred hhhccc---cCCC-CchHHHHHHHhhcCC
Q 004989 301 LFELFC---PFST-GEEKTRTMSSLRHRV 325 (720)
Q Consensus 301 l~eLlt---pf~~-~~~~~~~~~~l~~~~ 325 (720)
+|+|++ ||.. .+....++..+..+.
T Consensus 190 ~~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 218 (225)
T smart00221 190 LYELLWGPEPFSGEGEFTSLLSDVWSFGV 218 (225)
T ss_pred HHHHHHCCCCccccchhHHHHHHHHhcCC
Confidence 999999 6755 344445666666554
No 409
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.72 E-value=6.3e-17 Score=169.94 Aligned_cols=219 Identities=22% Similarity=0.270 Sum_probs=160.3
Q ss_pred hhhchhhhhhcccCCCC-CceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC--CCCCHHHHHHHHHHHHHHHHH
Q 004989 61 ELRKHSDGVELTHGDHL-RNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK--RSVDVYECLHIFRQIVEIVYA 136 (720)
Q Consensus 61 ~~r~~~e~~~L~~l~Hp-nIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~--~~l~~~~~~~i~~QIl~aL~y 136 (720)
.....+|..+++.+.|+ +|+++++ .+.... ..++++++ .+++|.+++.... ..++...+..++.|++.++.|
T Consensus 41 ~~~~~~e~~~~~~~~~~~~i~~~~~-~~~~~~---~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 116 (384)
T COG0515 41 VERFLREIQILASLNHPPNIVKLYD-FFQDEG---SLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEY 116 (384)
T ss_pred HHHHHHHHHHHHHccCCcceeeEEE-EEecCC---EEEEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHH
Confidence 33445777789999999 7999999 443332 37999999 9999998775543 259999999999999999999
Q ss_pred HHHCCceeccCCCCcEEEccCC-ceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccC
Q 004989 137 AHSQGIVVHNVRPSCFVMSSFN-HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 215 (720)
Q Consensus 137 LHs~gIvHrDLKP~NILl~~~~-~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~ 215 (720)
+|+.|++||||||+||+++..+ .++++|||.+......... .
T Consensus 117 ~H~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~--------------------------------~----- 159 (384)
T COG0515 117 LHSKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGST--------------------------------S----- 159 (384)
T ss_pred HHhCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCCcc--------------------------------c-----
Confidence 9999999999999999999888 7999999987432111000 0
Q ss_pred CCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC---CCCCccc
Q 004989 216 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG---APVSCAS 292 (720)
Q Consensus 216 ~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~---~~~s~~s 292 (720)
..........||.+|+|||.+.+ ..+....
T Consensus 160 -----------------------------------------------~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~ 192 (384)
T COG0515 160 -----------------------------------------------SIPALPSTSVGTPGYMAPEVLLGLSLAYASSSS 192 (384)
T ss_pred -----------------------------------------------cccccccccccccccCCHHHhcCCCCCCCCchH
Confidence 00000112578999999999988 4689999
Q ss_pred cchhhhchhhhccc---cCCCCch---HHHHHHHhhcCCCC---ccccccC-----chHHHHHHHcCCCCCCCCCChHHH
Q 004989 293 DIYRLGVLLFELFC---PFSTGEE---KTRTMSSLRHRVLP---PQLLLKF-----PKEASFCLWLLHPEPSGRPKMGEL 358 (720)
Q Consensus 293 DIwSLGvll~eLlt---pf~~~~~---~~~~~~~l~~~~~p---~~~~~~~-----p~~~~Li~~~L~~dP~~Rpta~ei 358 (720)
|+|++|++++++++ ||..... .......+.....+ ....... ....+++..++..+|..|.+..+.
T Consensus 193 D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 272 (384)
T COG0515 193 DIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSD 272 (384)
T ss_pred hHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCcccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHH
Confidence 99999999999888 5554442 33444444443322 1222221 244599999999999999999998
Q ss_pred HcCcccCCC
Q 004989 359 LQSEFLNEP 367 (720)
Q Consensus 359 L~hp~~~~~ 367 (720)
..+++....
T Consensus 273 ~~~~~~~~~ 281 (384)
T COG0515 273 LSHDLLAHL 281 (384)
T ss_pred hhchHhhCc
Confidence 887655544
No 410
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.71 E-value=2.6e-18 Score=189.17 Aligned_cols=215 Identities=17% Similarity=0.202 Sum_probs=162.7
Q ss_pred hchhhhhhcccCC-CCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 63 RKHSDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~L~~l~-HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+...|..++...+ ||.+|++.. .++.+. ..++++++ .|+.|...+.+. ..+.+.....+...++-+++++|+.
T Consensus 42 ~t~~er~il~~~~~~~f~v~lhy-afqt~~---kl~l~ld~~rgg~lft~l~~~-~~f~~~~~~~~~aelaLald~lh~l 116 (612)
T KOG0603|consen 42 HTKQERIILAFVHNTPFLVKLHY-AFQTDG---KLYLILDFLRGGDLFTRLSKE-VMFDELDVAFYLAELALALDHLHKL 116 (612)
T ss_pred ccccHHHHHhhccCCCceeeeee-eecccc---chhHhhhhcccchhhhccccC-CchHHHHHHHHHHHHHHHHhhcchh
Confidence 4456667888877 999999998 454544 46899999 888999888444 3488999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+|||+|++||+++.+|++++.|||..+..-
T Consensus 117 ~iiyrd~k~enilld~~Ghi~~tdfglske~v------------------------------------------------ 148 (612)
T KOG0603|consen 117 GIAYRDYKLENVLLLLEGHIKLTDFGLSKEAV------------------------------------------------ 148 (612)
T ss_pred HHHHhcccccceeecccCccccCCchhhhHhH------------------------------------------------
Confidence 99999999999999999999998777663210
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhch
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
+. ...+||.-|||||+++ ....++|.||+|++
T Consensus 149 -------------------------------------~~---------~~~cgt~eymApEI~~--gh~~a~D~ws~gvl 180 (612)
T KOG0603|consen 149 -------------------------------------KE---------KIACGTYEYRAPEIIN--GHLSAADWWSFGVL 180 (612)
T ss_pred -------------------------------------hh---------hhcccchhhhhhHhhh--ccCCcccchhhhhh
Confidence 00 0127899999999998 56899999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC-ccch
Q 004989 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP-RDSM 371 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~-~~~l 371 (720)
+|||++ ||.+ ..+..|....++ .....++...+++..++..+|.+|. -+.|+++|+||... +..+
T Consensus 181 ~felltg~~pf~~-----~~~~~Il~~~~~-~p~~l~~~a~~~~~~l~~r~p~nrLg~~~~~~~eik~h~f~~~i~~~~l 254 (612)
T KOG0603|consen 181 AFELLTGTLPFGG-----DTMKRILKAELE-MPRELSAEARSLFRQLFKRNPENRLGAGPDGVDEIKQHEFFQSIDWNEL 254 (612)
T ss_pred HHHHhhCCCCCch-----HHHHHHhhhccC-CchhhhHHHHHHHHHHHhhCHHHHhccCcchhHHHhccchheeeeHhhH
Confidence 999999 6665 344444332111 1112234445899999999999995 46899999999987 4445
Q ss_pred HHHHHHHHHhhhh
Q 004989 372 EEREAAIELREQI 384 (720)
Q Consensus 372 ~e~~~~~~~~e~~ 384 (720)
..+....++....
T Consensus 255 ~~r~~~~~fkp~~ 267 (612)
T KOG0603|consen 255 EARSRPPPFKPGS 267 (612)
T ss_pred hhcCCCCCCCCcc
Confidence 5555555554433
No 411
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.68 E-value=9.1e-18 Score=192.84 Aligned_cols=202 Identities=19% Similarity=0.213 Sum_probs=141.2
Q ss_pred cccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCC
Q 004989 71 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPS 150 (720)
Q Consensus 71 L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~ 150 (720)
...++|||.+.+-- +..... ..|+|-+|--.+|.|.|.. .+-+...+.+-|+.||+.||.-+|..||+|||||.+
T Consensus 75 ~~l~~~pn~lPfqk-~~~t~k---AAylvRqyvkhnLyDRlST-RPFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsE 149 (1431)
T KOG1240|consen 75 FALMKAPNCLPFQK-VLVTDK---AAYLVRQYVKHNLYDRLST-RPFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSE 149 (1431)
T ss_pred HHhhcCCcccchHH-HHHhhH---HHHHHHHHHhhhhhhhhcc-chHHHHHHHHHHHHHHHHHHHHHHHcCccccccccc
Confidence 56678999999877 444443 3488889977799999933 334788999999999999999999999999999999
Q ss_pred cEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCCC
Q 004989 151 CFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSS 230 (720)
Q Consensus 151 NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~ 230 (720)
||||++-+.+.|.||..-+..=.+ +|- -+||+.-
T Consensus 150 NILiTSWNW~~LtDFAsFKPtYLP---------------------eDN--------Padf~fF----------------- 183 (1431)
T KOG1240|consen 150 NILITSWNWLYLTDFASFKPTYLP---------------------EDN--------PADFTFF----------------- 183 (1431)
T ss_pred eEEEeeechhhhhcccccCCccCC---------------------CCC--------cccceEE-----------------
Confidence 999999999999999754221000 000 0455321
Q ss_pred ccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC----------C-CCccccchhhhc
Q 004989 231 AYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA----------P-VSCASDIYRLGV 299 (720)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~----------~-~s~~sDIwSLGv 299 (720)
.|.. ---..|+|||-+... + .+++.||||+||
T Consensus 184 -----------------FDTS--------------------rRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GC 226 (1431)
T KOG1240|consen 184 -----------------FDTS--------------------RRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGC 226 (1431)
T ss_pred -----------------EecC--------------------CceeeecChHhhhccccccccCCcccccChhhhhhhhhH
Confidence 1111 012369999988541 1 578999999999
Q ss_pred hhhhccc-cCCCCchHHHHHHHhhc-CCCCccccccCc--hHHHHHHHcCCCCCCCCCChHHHHcC
Q 004989 300 LLFELFC-PFSTGEEKTRTMSSLRH-RVLPPQLLLKFP--KEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 300 ll~eLlt-pf~~~~~~~~~~~~l~~-~~~p~~~~~~~p--~~~~Li~~~L~~dP~~Rpta~eiL~h 361 (720)
+++||++ +-+.++ ..+....-++ ...+...+...+ ....|+..|++.||++|.+|++.|+.
T Consensus 227 ViaELf~Eg~PlF~-LSQL~aYr~~~~~~~e~~Le~Ied~~~Rnlil~Mi~rdPs~RlSAedyL~~ 291 (1431)
T KOG1240|consen 227 VIAELFLEGRPLFT-LSQLLAYRSGNADDPEQLLEKIEDVSLRNLILSMIQRDPSKRLSAEDYLQK 291 (1431)
T ss_pred HHHHHHhcCCCccc-HHHHHhHhccCccCHHHHHHhCcCccHHHHHHHHHccCchhccCHHHHHHh
Confidence 9999999 222221 1222222222 223333333333 34599999999999999999999984
No 412
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.64 E-value=1.3e-16 Score=183.47 Aligned_cols=164 Identities=18% Similarity=0.241 Sum_probs=118.5
Q ss_pred HHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhccccccc
Q 004989 131 VEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDL 210 (720)
Q Consensus 131 l~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Df 210 (720)
+.+++|||+-||+|||+||+|.+|+.-|++|+.|||+.+........
T Consensus 153 vla~Eylh~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~at--------------------------------- 199 (1205)
T KOG0606|consen 153 VLAVEYLHSYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLAT--------------------------------- 199 (1205)
T ss_pred hHHhHhhccCCeecCCCCCCcceeeecccccccchhhhhhhhhhccc---------------------------------
Confidence 78999999999999999999999999999999999887442211000
Q ss_pred ccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCc
Q 004989 211 QLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSC 290 (720)
Q Consensus 211 gla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~ 290 (720)
++..-.+.+...+- .....+|||.|+|||++....|+.
T Consensus 200 -----------------------------------nl~eg~I~k~t~Ef-------~dKqvcgTPeyiaPeVilrqgygk 237 (1205)
T KOG0606|consen 200 -----------------------------------NLKEGHIEKDTHEF-------QDKQVCGTPEYIAPEVILRQGYGK 237 (1205)
T ss_pred -----------------------------------hhhhcchHHHHHHh-------hhccccCCccccChhhhhhhccCC
Confidence 00000000000000 011158999999999999999999
Q ss_pred cccchhhhchhhhccc---cCCCCchHHHHHHHhhcCC-CCccccccCchHHHHHHHcCCCCCCCCC---ChHHHHcCcc
Q 004989 291 ASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRV-LPPQLLLKFPKEASFCLWLLHPEPSGRP---KMGELLQSEF 363 (720)
Q Consensus 291 ~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~-~p~~~~~~~p~~~~Li~~~L~~dP~~Rp---ta~eiL~hp~ 363 (720)
.+|+|++|+|+||.+. ||++..+..-.-..+...+ .|..-....++.+++|..+|+.+|..|. .+-++.+|+|
T Consensus 238 pvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~wpE~dea~p~Ea~dli~~LL~qnp~~Rlgt~ga~evk~h~f 317 (1205)
T KOG0606|consen 238 PVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEEDEALPPEAQDLIEQLLRQNPLCRLGTGGALEVKQHGF 317 (1205)
T ss_pred CccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhccccccCcCCCHHHHHHHHHHHHhChHhhcccchhhhhhhccc
Confidence 9999999999999987 8888765543334444433 3444333445556999999999999994 6778899999
Q ss_pred cCCCcc
Q 004989 364 LNEPRD 369 (720)
Q Consensus 364 ~~~~~~ 369 (720)
|.....
T Consensus 318 f~~LDw 323 (1205)
T KOG0606|consen 318 FQLLDW 323 (1205)
T ss_pred eeeccc
Confidence 998844
No 413
>KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown]
Probab=99.63 E-value=9e-16 Score=157.88 Aligned_cols=122 Identities=11% Similarity=0.188 Sum_probs=99.0
Q ss_pred hhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCE
Q 004989 581 EGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKL 659 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i 659 (720)
+...+||...+-.++.+.+ +|.+||.||+|+|||+.||||+.|++|++||..++.... ..+ .|+..|
T Consensus 136 D~TvR~WD~~TeTp~~t~K-----gH~~WVlcvawsPDgk~iASG~~dg~I~lwdpktg~~~g-------~~l~gH~K~I 203 (480)
T KOG0271|consen 136 DTTVRLWDLDTETPLFTCK-----GHKNWVLCVAWSPDGKKIASGSKDGSIRLWDPKTGQQIG-------RALRGHKKWI 203 (480)
T ss_pred CceEEeeccCCCCcceeec-----CCccEEEEEEECCCcchhhccccCCeEEEecCCCCCccc-------ccccCcccce
Confidence 4456788888777777776 359999999999999999999999999999988762111 122 235669
Q ss_pred EEEEEecCCC----CEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccce
Q 004989 660 SSICWNSYIK----SQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 660 ~~l~w~~~~~----~~laS~s~D~~v~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
++|+|.|.+. .+|||+|.||+|+|||+..|+++.. |+||.|...+. +-+||.|.-
T Consensus 204 t~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~~~~~lsgHT~~VTCvrwGG~gl-iySgS~Drt 269 (480)
T KOG0271|consen 204 TALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGTCVRTLSGHTASVTCVRWGGEGL-IYSGSQDRT 269 (480)
T ss_pred eEEeecccccCCCccceecccCCCCEEEEEccCceEEEEeccCccceEEEEEcCCce-EEecCCCce
Confidence 9999998654 4899999999999999999999987 99999997765 457888753
No 414
>KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification]
Probab=99.60 E-value=2.8e-15 Score=156.20 Aligned_cols=125 Identities=10% Similarity=0.131 Sum_probs=107.6
Q ss_pred hhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecC-CCC
Q 004989 580 LEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS-RSK 658 (720)
Q Consensus 580 ~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~ 658 (720)
.+.+.+.|...+.+-+..| .||...|.+|+|+|+|..+||||.|+++||||++.. .++..|.. .+-
T Consensus 323 lD~~~RvWDlRtgr~im~L-----~gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r--------~~ly~ipAH~nl 389 (459)
T KOG0272|consen 323 LDSLGRVWDLRTGRCIMFL-----AGHIKEILSVAFSPNGYHLATGSSDNTCKVWDLRMR--------SELYTIPAHSNL 389 (459)
T ss_pred ccchhheeecccCcEEEEe-----cccccceeeEeECCCceEEeecCCCCcEEEeeeccc--------ccceecccccch
Confidence 3445677777777777666 456999999999999999999999999999999876 24555544 667
Q ss_pred EEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceEE
Q 004989 659 LSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 659 i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
|+.|+|+|..+.+|+|||||++|+||.-.+.+++++ |.|++.++.+..+.+++||--..
T Consensus 390 VS~Vk~~p~~g~fL~TasyD~t~kiWs~~~~~~~ksLaGHe~kV~s~Dis~d~~~i~t~s~DRT~K 455 (459)
T KOG0272|consen 390 VSQVKYSPQEGYFLVTASYDNTVKIWSTRTWSPLKSLAGHEGKVISLDISPDSQAIATSSFDRTIK 455 (459)
T ss_pred hhheEecccCCeEEEEcccCcceeeecCCCcccchhhcCCccceEEEEeccCCceEEEeccCceee
Confidence 999999998899999999999999999999999987 99999999999999999996543
No 415
>KOG0275 consensus Conserved WD40 repeat-containing protein [General function prediction only]
Probab=99.60 E-value=5.8e-16 Score=155.86 Aligned_cols=112 Identities=15% Similarity=0.223 Sum_probs=97.0
Q ss_pred CCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceE--EecCCCCEEEEEEecCCCCEEEEEeCCCcEE
Q 004989 605 NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVV--EMASRSKLSSICWNSYIKSQIASSNFEGVVQ 682 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~--~~~~~~~i~~l~w~~~~~~~laS~s~D~~v~ 682 (720)
|..+.|.|..|+|||+||+|||+||-|.|||+.++. -..|..|... .|.+...|.|++||.+ ..+||||+.||.||
T Consensus 211 g~KSh~EcA~FSPDgqyLvsgSvDGFiEVWny~~GK-lrKDLkYQAqd~fMMmd~aVlci~FSRD-sEMlAsGsqDGkIK 288 (508)
T KOG0275|consen 211 GQKSHVECARFSPDGQYLVSGSVDGFIEVWNYTTGK-LRKDLKYQAQDNFMMMDDAVLCISFSRD-SEMLASGSQDGKIK 288 (508)
T ss_pred ccccchhheeeCCCCceEeeccccceeeeehhccch-hhhhhhhhhhcceeecccceEEEeeccc-HHHhhccCcCCcEE
Confidence 346779999999999999999999999999998872 2335555553 4667889999999985 56999999999999
Q ss_pred EEECCCCcEEEE--------EEEEeecCCceEEEecCccceEEc
Q 004989 683 VGQVLHLIYFSA--------LYCIVLNKLLIIFRYGMFQEVKYL 718 (720)
Q Consensus 683 lWD~~tg~~~~~--------v~~v~~~~~~~~~~~~~~~~~~~~ 718 (720)
||-+.||+|++. |+|+.|+++++.+.++|||.+..+
T Consensus 289 vWri~tG~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRi 332 (508)
T KOG0275|consen 289 VWRIETGQCLRRFDRAHTKGVTCLSFSRDNSQILSASFDQTVRI 332 (508)
T ss_pred EEEEecchHHHHhhhhhccCeeEEEEccCcchhhcccccceEEE
Confidence 999999999985 899999999999999999997654
No 416
>KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown]
Probab=99.60 E-value=2.6e-15 Score=154.49 Aligned_cols=119 Identities=12% Similarity=0.195 Sum_probs=97.7
Q ss_pred hccccceEEeeeec-cCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEE
Q 004989 586 YLSFSKLRVKADLN-QGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSIC 663 (720)
Q Consensus 586 ~~~~~~~~~~~~l~-~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~ 663 (720)
|..-.-|||.+..+ ...+.||+..|.|++|+|+|..|||||-|-|+|+||+.+. .|...+ .|.++|.||+
T Consensus 93 yqpqavfrvrpvtrCssS~~GH~e~Vl~~~fsp~g~~l~tGsGD~TvR~WD~~Te--------Tp~~t~KgH~~WVlcva 164 (480)
T KOG0271|consen 93 YQPQAVFRVRPVTRCSSSIAGHGEAVLSVQFSPTGSRLVTGSGDTTVRLWDLDTE--------TPLFTCKGHKNWVLCVA 164 (480)
T ss_pred eccchhhcccccceeccccCCCCCcEEEEEecCCCceEEecCCCceEEeeccCCC--------CcceeecCCccEEEEEE
Confidence 34445577888888 7789999999999999999999999999999999999876 355554 4588999999
Q ss_pred EecCCCCEEEEEeCCCcEEEEECCCCcEEEE--------EEEEeecC-----CceEEEecCcc
Q 004989 664 WNSYIKSQIASSNFEGVVQVGQVLHLIYFSA--------LYCIVLNK-----LLIIFRYGMFQ 713 (720)
Q Consensus 664 w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~--------v~~v~~~~-----~~~~~~~~~~~ 713 (720)
|+|++ ..||||+.||+|++||..+|+++.. |++++|.| .+-.++++|=|
T Consensus 165 wsPDg-k~iASG~~dg~I~lwdpktg~~~g~~l~gH~K~It~Lawep~hl~p~~r~las~skD 226 (480)
T KOG0271|consen 165 WSPDG-KKIASGSKDGSIRLWDPKTGQQIGRALRGHKKWITALAWEPLHLVPPCRRLASSSKD 226 (480)
T ss_pred ECCCc-chhhccccCCeEEEecCCCCCcccccccCcccceeEEeecccccCCCccceecccCC
Confidence 99965 5999999999999999999998875 88888854 34445554433
No 417
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.58 E-value=3.5e-15 Score=161.62 Aligned_cols=93 Identities=16% Similarity=0.132 Sum_probs=75.8
Q ss_pred hchhhhhhcccCCCCCcee-cccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 63 RKHSDGVELTHGDHLRNQG-GLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~-l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+..+|..+|.+++|+||+. +++ .+ ..|+|||| .|++|.. + .. .. ...++.|++.+|.|||++
T Consensus 67 ~~~~E~~iL~~L~h~~iv~~l~~----~~----~~~LVmE~~~G~~L~~-~-~~---~~---~~~~~~~i~~aL~~lH~~ 130 (365)
T PRK09188 67 LAAREIRALKTVRGIGVVPQLLA----TG----KDGLVRGWTEGVPLHL-A-RP---HG---DPAWFRSAHRALRDLHRA 130 (365)
T ss_pred HHHHHHHHHHhccCCCCCcEEEE----cC----CcEEEEEccCCCCHHH-h-Cc---cc---hHHHHHHHHHHHHHHHHC
Confidence 3458889999999999985 443 11 36999999 8899973 2 11 11 146889999999999999
Q ss_pred CceeccC-CCCcEEEccCCceEEeecCcccCC
Q 004989 141 GIVVHNV-RPSCFVMSSFNHVSFIESASCSDS 171 (720)
Q Consensus 141 gIvHrDL-KP~NILl~~~~~vkliDfg~a~~~ 171 (720)
||+|||| ||+|||++.++.++|+|||+++.+
T Consensus 131 gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~~ 162 (365)
T PRK09188 131 GITHNDLAKPQNWLMGPDGEAAVIDFQLASVF 162 (365)
T ss_pred CCeeCCCCCcceEEEcCCCCEEEEECccceec
Confidence 9999999 999999998999999999998654
No 418
>KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification]
Probab=99.56 E-value=3.1e-15 Score=155.90 Aligned_cols=124 Identities=12% Similarity=0.145 Sum_probs=102.9
Q ss_pred chhhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCC
Q 004989 578 PFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRS 657 (720)
Q Consensus 578 ~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 657 (720)
+-.++..+.|.++.=.+++ +|.||..-|..|+|+|+|+||+||+.|.+-|+||+.+.... +..-+|..
T Consensus 237 ~s~Dgtvklw~~~~e~~l~-----~l~gH~~RVs~VafHPsG~~L~TasfD~tWRlWD~~tk~El-------L~QEGHs~ 304 (459)
T KOG0272|consen 237 ASADGTVKLWKLSQETPLQ-----DLEGHLARVSRVAFHPSGKFLGTASFDSTWRLWDLETKSEL-------LLQEGHSK 304 (459)
T ss_pred eccCCceeeeccCCCcchh-----hhhcchhhheeeeecCCCceeeecccccchhhcccccchhh-------Hhhccccc
Confidence 3445577788877655544 55677999999999999999999999999999999886321 11223455
Q ss_pred CEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccc
Q 004989 658 KLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 658 ~i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~ 714 (720)
.|.+|+|+|+ +++++||+.|..-||||++||.||+. |++|+|+|.+-.+++||-|-
T Consensus 305 ~v~~iaf~~D-GSL~~tGGlD~~~RvWDlRtgr~im~L~gH~k~I~~V~fsPNGy~lATgs~Dn 367 (459)
T KOG0272|consen 305 GVFSIAFQPD-GSLAATGGLDSLGRVWDLRTGRCIMFLAGHIKEILSVAFSPNGYHLATGSSDN 367 (459)
T ss_pred ccceeEecCC-CceeeccCccchhheeecccCcEEEEecccccceeeEeECCCceEEeecCCCC
Confidence 6999999995 57999999999999999999999986 99999999999999999874
No 419
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.56 E-value=5.4e-14 Score=151.58 Aligned_cols=212 Identities=16% Similarity=0.101 Sum_probs=139.4
Q ss_pred chhhhhhcccCCC----CCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHH
Q 004989 64 KHSDGVELTHGDH----LRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 64 ~~~e~~~L~~l~H----pnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
...|..+|..+.. +++..+++... .....-|+||+..|.+|.++.+.. .+.++...+..|+.|++.+|.+||
T Consensus 63 l~~E~~vl~~l~~~~~~~~~~~~~~~G~---~~~~~~~iVM~l~G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH 139 (322)
T KOG1164|consen 63 LKIEIQVLKKLEKKNGPSHFPKLLDHGR---STEDFNFIVMSLLGPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLH 139 (322)
T ss_pred chhHHHHHHHHhhhcCCCCCCEEEEecc---CCCceeEEEEeccCccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHH
Confidence 3355556666653 57777777221 233357999999999999977433 367999999999999999999999
Q ss_pred HCCceeccCCCCcEEEccC-----CceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccc
Q 004989 139 SQGIVVHNVRPSCFVMSSF-----NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLV 213 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~~~-----~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla 213 (720)
+.|++||||||+|+++... ..+.++|||+++.+... .+.|-.
T Consensus 140 ~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~~~~~---------------------------------~~~~~~ 186 (322)
T KOG1164|consen 140 SKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARRFKYV---------------------------------GDSGGN 186 (322)
T ss_pred hcCcccCCcCHHHeeecCCCCcccceEEEEecCCCcccccc---------------------------------CCCCcc
Confidence 9999999999999999854 46899999998632110 000000
Q ss_pred cCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCcc--ccccccCCcccCcccccCCCCCcc
Q 004989 214 TAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMK--QILLMETNWYASPEELAGAPVSCA 291 (720)
Q Consensus 214 ~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~--~~~~~GT~~Y~APE~l~~~~~s~~ 291 (720)
..+.+ .....||..|+++....+...+.+
T Consensus 187 -------------------------------------------------~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~ 217 (322)
T KOG1164|consen 187 -------------------------------------------------LRPPRPQKGLFRGTLRYASINVHLGIEQGRR 217 (322)
T ss_pred -------------------------------------------------cccCCCCccCCCCccccccHHHhCCCccCCc
Confidence 00000 011469999999999999999999
Q ss_pred ccchhhhchhhhccc---cCCCCchH--HHHHHHhhcCCCCccccccCchHH-HHHHHcCCCCCCCCCChHHHHc
Q 004989 292 SDIYRLGVLLFELFC---PFSTGEEK--TRTMSSLRHRVLPPQLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 292 sDIwSLGvll~eLlt---pf~~~~~~--~~~~~~l~~~~~p~~~~~~~p~~~-~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
.|+||++-++.||+. ||...... ...+...........+....|.+. .+...+-..+...+|....+..
T Consensus 218 DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~ 292 (322)
T KOG1164|consen 218 DDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDPRKLLTDRFGDLKPEEFAKILEYIDSLDYEDKPDYEKLAE 292 (322)
T ss_pred hhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHhhhhccccccCCChHHHHHHHHHhhccCCcCCCCHHHHHH
Confidence 999999999999997 55443321 111222221111111222233333 4555555567777776655543
No 420
>KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms]
Probab=99.56 E-value=1.6e-14 Score=143.63 Aligned_cols=112 Identities=15% Similarity=0.197 Sum_probs=92.5
Q ss_pred CCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCC-CCEEEEEeCCC
Q 004989 601 GDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYI-KSQIASSNFEG 679 (720)
Q Consensus 601 ~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~-~~~laS~s~D~ 679 (720)
.-|.||+..|.||+|++|...|+|||.|++|++||.-... .|.+.+-.+++.|+||+|+|.. ..+|+|+|.|+
T Consensus 99 ~~f~GH~~dVlsva~s~dn~qivSGSrDkTiklwnt~g~c------k~t~~~~~~~~WVscvrfsP~~~~p~Ivs~s~Dk 172 (315)
T KOG0279|consen 99 RRFVGHTKDVLSVAFSTDNRQIVSGSRDKTIKLWNTLGVC------KYTIHEDSHREWVSCVRFSPNESNPIIVSASWDK 172 (315)
T ss_pred EEEEecCCceEEEEecCCCceeecCCCcceeeeeeecccE------EEEEecCCCcCcEEEEEEcCCCCCcEEEEccCCc
Confidence 3467889999999999999999999999999999975541 1222332337789999999974 56999999999
Q ss_pred cEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceEEc
Q 004989 680 VVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVKYL 718 (720)
Q Consensus 680 ~v~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~~~ 718 (720)
||||||+++-+...+ ++.+++||+++...||-=|-..+|
T Consensus 173 tvKvWnl~~~~l~~~~~gh~~~v~t~~vSpDGslcasGgkdg~~~L 218 (315)
T KOG0279|consen 173 TVKVWNLRNCQLRTTFIGHSGYVNTVTVSPDGSLCASGGKDGEAML 218 (315)
T ss_pred eEEEEccCCcchhhccccccccEEEEEECCCCCEEecCCCCceEEE
Confidence 999999998876665 899999999999999976655554
No 421
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.54 E-value=9.2e-15 Score=145.39 Aligned_cols=195 Identities=16% Similarity=0.126 Sum_probs=144.3
Q ss_pred hhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHCC-c
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQG-I 142 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~yLHs~g-I 142 (720)
.|.-.|.-+.||||+.+++ .|.... ...++..| +-++|...|... +-.++..++..++.+|+.|+.|||+.. +
T Consensus 236 eefp~lrifshpnilpvlg-acnspp---nlv~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ 311 (448)
T KOG0195|consen 236 EEFPALRIFSHPNILPVLG-ACNSPP---NLVIISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPM 311 (448)
T ss_pred hhCcceeeecCCchhhhhh-hccCCC---CceEeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchh
Confidence 4455677788999999999 555554 45777778 888999999433 334688899999999999999999853 3
Q ss_pred -eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 143 -VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 143 -vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
----|....++|+++-+.+|.= + .+-|.+
T Consensus 312 ipr~~lns~hvmidedltarism---a--------------------------------------d~kfsf--------- 341 (448)
T KOG0195|consen 312 IPRFYLNSKHVMIDEDLTARISM---A--------------------------------------DTKFSF--------- 341 (448)
T ss_pred hhhhhcccceEEecchhhhheec---c--------------------------------------cceeee---------
Confidence 3345777788888776666520 0 011100
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCC---Cccccchhhh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV---SCASDIYRLG 298 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~---s~~sDIwSLG 298 (720)
+..-..-.|.||+||.+...+- -.++|+|||.
T Consensus 342 ---------------------------------------------qe~gr~y~pawmspealqrkped~n~raadmwsfa 376 (448)
T KOG0195|consen 342 ---------------------------------------------QEVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFA 376 (448)
T ss_pred ---------------------------------------------eccccccCcccCCHHHHhcCchhcchhhhhHHHHH
Confidence 0000234788999999987773 4589999999
Q ss_pred chhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHH
Q 004989 299 VLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELL 359 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL 359 (720)
+++|||-| ||....+...-|+...++..+...+...+....|+.-|+..||.+||..+.|+
T Consensus 377 illwel~trevpfadlspmecgmkialeglrv~ippgis~hm~klm~icmnedpgkrpkfdmiv 440 (448)
T KOG0195|consen 377 ILLWELNTREVPFADLSPMECGMKIALEGLRVHIPPGISRHMNKLMNICMNEDPGKRPKFDMIV 440 (448)
T ss_pred HHHHHhhccccccccCCchhhhhhhhhccccccCCCCccHHHHHHHHHHhcCCCCcCCCcceeh
Confidence 99999999 99988877777777666655555555667778999999999999999987764
No 422
>KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics]
Probab=99.54 E-value=2.6e-14 Score=150.72 Aligned_cols=109 Identities=15% Similarity=0.259 Sum_probs=91.1
Q ss_pred cCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecC-CCCEEEEEEecCC--------CC
Q 004989 600 QGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS-RSKLSSICWNSYI--------KS 670 (720)
Q Consensus 600 ~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~i~~l~w~~~~--------~~ 670 (720)
-..+.||.+.|+++.|+|.|.+|||||.|+|+|||...... .+..|.. ...|..+.|+|.+ +.
T Consensus 352 ~~t~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~~~--------~~~~l~~Hskei~t~~wsp~g~v~~n~~~~~ 423 (524)
T KOG0273|consen 352 VKTFIGHHGEVNALKWNPTGSLLASCSDDGTLKIWSMGQSN--------SVHDLQAHSKEIYTIKWSPTGPVTSNPNMNL 423 (524)
T ss_pred ceeeecccCceEEEEECCCCceEEEecCCCeeEeeecCCCc--------chhhhhhhccceeeEeecCCCCccCCCcCCc
Confidence 46788899999999999999999999999999999975531 1112222 3347778777754 35
Q ss_pred EEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceE
Q 004989 671 QIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 671 ~laS~s~D~~v~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
.|||++.|+||++||+..|+++.+ ||+++|+|.+.++++||||.-.
T Consensus 424 ~l~sas~dstV~lwdv~~gv~i~~f~kH~~pVysvafS~~g~ylAsGs~dg~V 476 (524)
T KOG0273|consen 424 MLASASFDSTVKLWDVESGVPIHTLMKHQEPVYSVAFSPNGRYLASGSLDGCV 476 (524)
T ss_pred eEEEeecCCeEEEEEccCCceeEeeccCCCceEEEEecCCCcEEEecCCCCee
Confidence 799999999999999999999987 8999999999999999999754
No 423
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.54 E-value=6.2e-15 Score=149.06 Aligned_cols=96 Identities=14% Similarity=0.111 Sum_probs=76.8
Q ss_pred chhhhhhcccCCCCCceecccceeecCCC----CCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAA----IDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~----~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
.++|+..+.++.||+|..+.+.+...... ....+++||| .|.+|.++.. +++ ....+|+.+|..+|
T Consensus 82 ~e~Ea~~l~rL~~~GI~~~~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~-----~~~----~~~~~i~~~l~~lH 152 (232)
T PRK10359 82 YENLIVQTDRVRSEGLASLNDFYLLAERKTLRYAHTYIMLIEYIEGVELNDMPE-----ISE----DVKAKIKASIESLH 152 (232)
T ss_pred HHHHHHHHHHHHHCCCCcceEeeeecccccccccCCeEEEEEEECCccHHHhhh-----ccH----HHHHHHHHHHHHHH
Confidence 35787889999999999998833322211 2347999999 9999998741 333 34669999999999
Q ss_pred HCCceeccCCCCcEEEccCCceEEeecCccc
Q 004989 139 SQGIVVHNVRPSCFVMSSFNHVSFIESASCS 169 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~~~~~vkliDfg~a~ 169 (720)
..|++|||+||+||+++++| ++++|||...
T Consensus 153 ~~gi~H~Dikp~Nili~~~g-i~liDfg~~~ 182 (232)
T PRK10359 153 QHGMVSGDPHKGNFIVSKNG-LRIIDLSGKR 182 (232)
T ss_pred HcCCccCCCChHHEEEeCCC-EEEEECCCcc
Confidence 99999999999999999888 9999998763
No 424
>PTZ00421 coronin; Provisional
Probab=99.54 E-value=8.5e-14 Score=157.12 Aligned_cols=114 Identities=15% Similarity=0.106 Sum_probs=94.9
Q ss_pred CCCCCCCeEEEEECC-CCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCEEEEEEecCCCCEEEEEeCCCc
Q 004989 603 LLNSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEGV 680 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~-dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~l~w~~~~~~~laS~s~D~~ 680 (720)
+.+|.+.|.+|+|+| |+.+|||||.|++|+|||+...... .....|+..+. |..+|.+|+|+|...++||||+.|++
T Consensus 71 l~GH~~~V~~v~fsP~d~~~LaSgS~DgtIkIWdi~~~~~~-~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~Dgt 149 (493)
T PTZ00421 71 LLGQEGPIIDVAFNPFDPQKLFTASEDGTIMGWGIPEEGLT-QNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMV 149 (493)
T ss_pred EeCCCCCEEEEEEcCCCCCEEEEEeCCCEEEEEecCCCccc-cccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCE
Confidence 567899999999999 8999999999999999998754110 11123555554 46789999999977789999999999
Q ss_pred EEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceEE
Q 004989 681 VQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 681 v~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
|+|||+.+++.+.. |++++|++.+..+++|+.|....
T Consensus 150 VrIWDl~tg~~~~~l~~h~~~V~sla~spdG~lLatgs~Dg~Ir 193 (493)
T PTZ00421 150 VNVWDVERGKAVEVIKCHSDQITSLEWNLDGSLLCTTSKDKKLN 193 (493)
T ss_pred EEEEECCCCeEEEEEcCCCCceEEEEEECCCCEEEEecCCCEEE
Confidence 99999999988765 89999999999999999986543
No 425
>KOG0266 consensus WD40 repeat-containing protein [General function prediction only]
Probab=99.53 E-value=6.3e-14 Score=157.96 Aligned_cols=108 Identities=10% Similarity=0.123 Sum_probs=93.6
Q ss_pred CCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcE
Q 004989 602 DLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 602 ~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~v 681 (720)
.+.+|...|++|+|+|||++++||+.|++|||||..... .+..+..+|...|+||+|+|.+ +.|+||++|++|
T Consensus 198 ~l~~h~~~v~~~~fs~d~~~l~s~s~D~tiriwd~~~~~------~~~~~l~gH~~~v~~~~f~p~g-~~i~Sgs~D~tv 270 (456)
T KOG0266|consen 198 ELSGHTRGVSDVAFSPDGSYLLSGSDDKTLRIWDLKDDG------RNLKTLKGHSTYVTSVAFSPDG-NLLVSGSDDGTV 270 (456)
T ss_pred cccccccceeeeEECCCCcEEEEecCCceEEEeeccCCC------eEEEEecCCCCceEEEEecCCC-CEEEEecCCCcE
Confidence 457889999999999999999999999999999983221 1223344678889999999977 899999999999
Q ss_pred EEEECCCCcEEEE-------EEEEeecCCceEEEecCccceE
Q 004989 682 QVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 682 ~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
+|||+++|+++.. |.+++|++.+..+.+++.|...
T Consensus 271 riWd~~~~~~~~~l~~hs~~is~~~f~~d~~~l~s~s~d~~i 312 (456)
T KOG0266|consen 271 RIWDVRTGECVRKLKGHSDGISGLAFSPDGNLLVSASYDGTI 312 (456)
T ss_pred EEEeccCCeEEEeeeccCCceEEEEECCCCCEEEEcCCCccE
Confidence 9999999999887 8999999999999999988654
No 426
>PRK10345 hypothetical protein; Provisional
Probab=99.53 E-value=2.9e-14 Score=143.37 Aligned_cols=99 Identities=9% Similarity=0.099 Sum_probs=77.5
Q ss_pred hhhhhhcccC-----CCCCceecccceeecCCCCCc-EEEEEecCC---CCHHHHHhCCCCCCCHHHHHHHHHHHHHHH-
Q 004989 65 HSDGVELTHG-----DHLRNQGGLSGVCENEAAIDP-FVHAIEWGD---VSLRQWLDKPKRSVDVYECLHIFRQIVEIV- 134 (720)
Q Consensus 65 ~~e~~~L~~l-----~HpnIV~l~~~~~~~~~~~~~-~~lv~E~~g---gsL~~~L~~~~~~l~~~~~~~i~~QIl~aL- 134 (720)
.+|+.++.++ +||||+++|+ +++++..... +.+||||.| ++|.+++.+. .+++. ..++.|++.++
T Consensus 44 ~rEi~~l~~L~~~~~~h~nIvr~yg-~~et~~g~g~v~~~I~e~~G~~~~tL~~~l~~~--~~~e~--~~~~~~~L~~l~ 118 (210)
T PRK10345 44 RRELKYYAHLSRRLIDWSGIPRYYG-TVETDCGTGYVYDVIADFDGKPSITLTEFAEQC--RYEED--VAQLRQLLKKLK 118 (210)
T ss_pred HHHHHHHHHhhccCCCCcccceeeE-EEEeCCCCeEEEEEEecCCCCcchhHHHHHHcc--cccHh--HHHHHHHHHHHH
Confidence 4777788888 6899999999 6666543334 447899944 8999999553 26655 36688888888
Q ss_pred HHHHHCCceeccCCCCcEEEccC----CceEEeecCcc
Q 004989 135 YAAHSQGIVVHNVRPSCFVMSSF----NHVSFIESASC 168 (720)
Q Consensus 135 ~yLHs~gIvHrDLKP~NILl~~~----~~vkliDfg~a 168 (720)
+|||+++||||||||+|||++.. .+++|+||+.+
T Consensus 119 ~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~ 156 (210)
T PRK10345 119 RYLLDNRIVTMELKPQNILCQRISESEVIPVVCDNIGE 156 (210)
T ss_pred HHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEECCCC
Confidence 99999999999999999999743 37999995554
No 427
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.51 E-value=2.6e-13 Score=149.96 Aligned_cols=198 Identities=17% Similarity=0.256 Sum_probs=144.3
Q ss_pred cccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc-eeccCC
Q 004989 71 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI-VVHNVR 148 (720)
Q Consensus 71 L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI-vHrDLK 148 (720)
|.++.|.|+.++++.++. + ..++++.+| .-|+|.+.+......++..-...++++|+.||.|||.-.| .|+.|+
T Consensus 1 l~~l~h~n~~~f~g~~~~-~---~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~ 76 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVD-G---PEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALK 76 (484)
T ss_pred CcccchhhhhhheeeEec-C---CceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeec
Confidence 467899999999995444 4 367999999 8899999997767778999999999999999999998766 999999
Q ss_pred CCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccC
Q 004989 149 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 228 (720)
Q Consensus 149 P~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~ 228 (720)
+.|.+++..-.+|+.|||+....... .++..
T Consensus 77 s~nClvd~~w~lklt~~Gl~~~~~~~---------------------------------~~~~~---------------- 107 (484)
T KOG1023|consen 77 SSNCLVDSRWVLKLTDFGLNSLLEET---------------------------------AEPEA---------------- 107 (484)
T ss_pred cccceeeeeEEEEechhhhccccccc---------------------------------ccccc----------------
Confidence 99999999999999888876322100 00000
Q ss_pred CCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC-------CCccccchhhhchh
Q 004989 229 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-------VSCASDIYRLGVLL 301 (720)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-------~s~~sDIwSLGvll 301 (720)
.....-...|.|||.+.+.. .+.+.||||+|+++
T Consensus 108 ---------------------------------------~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~ 148 (484)
T KOG1023|consen 108 ---------------------------------------HHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIM 148 (484)
T ss_pred ---------------------------------------cchhHHHHhccCHHHhcccccccccccccccCCeehHHHHH
Confidence 00011244689999997742 36789999999999
Q ss_pred hhccc---cCCCCc---hHHHHHHHhhc-CC--CCcccc-c-cCc-hHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFC---PFSTGE---EKTRTMSSLRH-RV--LPPQLL-L-KFP-KEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt---pf~~~~---~~~~~~~~l~~-~~--~p~~~~-~-~~p-~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
+|+++ ||.... ...+....+.+ +. +.|... . ..+ ....++..||..+|..||+++.+-.
T Consensus 149 ~ei~~r~~~~~~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~ 219 (484)
T KOG1023|consen 149 YEILFRSGPFDLRNLVEDPDEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRS 219 (484)
T ss_pred HHHHhccCccccccccCChHHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHh
Confidence 99999 776531 11233333443 21 222222 1 333 3558999999999999999988754
No 428
>KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription]
Probab=99.51 E-value=5.8e-14 Score=156.59 Aligned_cols=119 Identities=9% Similarity=0.165 Sum_probs=102.4
Q ss_pred ccccceEEeeeec-c--CCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCEEEE
Q 004989 587 LSFSKLRVKADLN-Q--GDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSI 662 (720)
Q Consensus 587 ~~~~~~~~~~~l~-~--~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~l 662 (720)
....+.+++++-+ + +-+-||-+-|.||+|+|+..|+||||.|+++|+||..++. .|..+. |++.|++|
T Consensus 512 s~D~tArLWs~d~~~PlRifaghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~--------~VRiF~GH~~~V~al 583 (707)
T KOG0263|consen 512 SHDQTARLWSTDHNKPLRIFAGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGN--------SVRIFTGHKGPVTAL 583 (707)
T ss_pred CCCceeeeeecccCCchhhhcccccccceEEECCcccccccCCCCceEEEEEcCCCc--------EEEEecCCCCceEEE
Confidence 4455667777766 2 4577899999999999999999999999999999998872 355554 48889999
Q ss_pred EEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccc
Q 004989 663 CWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 663 ~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~ 714 (720)
+|||. |.+||||+.||.|+|||+.+|..+.+ ++++.|++.+.++++|+.|-
T Consensus 584 ~~Sp~-Gr~LaSg~ed~~I~iWDl~~~~~v~~l~~Ht~ti~SlsFS~dg~vLasgg~Dn 641 (707)
T KOG0263|consen 584 AFSPC-GRYLASGDEDGLIKIWDLANGSLVKQLKGHTGTIYSLSFSRDGNVLASGGADN 641 (707)
T ss_pred EEcCC-CceEeecccCCcEEEEEcCCCcchhhhhcccCceeEEEEecCCCEEEecCCCC
Confidence 99995 56999999999999999999988875 99999999999999999874
No 429
>PTZ00420 coronin; Provisional
Probab=99.49 E-value=3.7e-13 Score=153.06 Aligned_cols=126 Identities=17% Similarity=0.165 Sum_probs=95.9
Q ss_pred hhccccceEEeeeeccCCCCCCCCCeEEEEECCC-CCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEE
Q 004989 585 KYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRD-GELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSI 662 (720)
Q Consensus 585 ~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~d-g~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l 662 (720)
+++...+...+.. +.+|.+.|.+|+|+|+ +.+|||||.|++|+|||+.+..........|+..+ .|...|.+|
T Consensus 57 ~L~~~~r~~~v~~-----L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~sV 131 (568)
T PTZ00420 57 RLENQMRKPPVIK-----LKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKISII 131 (568)
T ss_pred EeeecCCCceEEE-----EcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCcEEEE
Confidence 4444444444444 4567999999999997 78999999999999999875311111111244444 346789999
Q ss_pred EEecCCCCEEEEEeCCCcEEEEECCCCcEEEE------EEEEeecCCceEEEecCccce
Q 004989 663 CWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 663 ~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
+|+|.+..+||||+.|++|+|||+++++.+.+ |++++|++.+..++.++-|..
T Consensus 132 af~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~~~~~V~SlswspdG~lLat~s~D~~ 190 (568)
T PTZ00420 132 DWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQINMPKKLSSLKWNIKGNLLSGTCVGKH 190 (568)
T ss_pred EECCCCCeEEEEEeCCCeEEEEECCCCcEEEEEecCCcEEEEEECCCCCEEEEEecCCE
Confidence 99998777789999999999999999987654 899999999999998887753
No 430
>KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton]
Probab=99.47 E-value=4.1e-13 Score=143.46 Aligned_cols=90 Identities=20% Similarity=0.357 Sum_probs=74.9
Q ss_pred ceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe----cCCCCEEEEEEec
Q 004989 591 KLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM----ASRSKLSSICWNS 666 (720)
Q Consensus 591 ~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~----~~~~~i~~l~w~~ 666 (720)
-||-..+++ .|+..|+||.|+|||++|||+|.||+|.|||-.++. -+.++ .|.+.|..|+|+|
T Consensus 179 PFKFk~s~r-----~HskFV~~VRysPDG~~Fat~gsDgki~iyDGktge--------~vg~l~~~~aHkGsIfalsWsP 245 (603)
T KOG0318|consen 179 PFKFKSSFR-----EHSKFVNCVRYSPDGSRFATAGSDGKIYIYDGKTGE--------KVGELEDSDAHKGSIFALSWSP 245 (603)
T ss_pred Ceeeeeccc-----ccccceeeEEECCCCCeEEEecCCccEEEEcCCCcc--------EEEEecCCCCccccEEEEEECC
Confidence 345555665 358899999999999999999999999999987762 23333 3578899999999
Q ss_pred CCCCEEEEEeCCCcEEEEECCCCcEEEE
Q 004989 667 YIKSQIASSNFEGVVQVGQVLHLIYFSA 694 (720)
Q Consensus 667 ~~~~~laS~s~D~~v~lWD~~tg~~~~~ 694 (720)
+. .+++|+|.|+++|||||.+++++++
T Consensus 246 Ds-~~~~T~SaDkt~KIWdVs~~slv~t 272 (603)
T KOG0318|consen 246 DS-TQFLTVSADKTIKIWDVSTNSLVST 272 (603)
T ss_pred CC-ceEEEecCCceEEEEEeeccceEEE
Confidence 65 6999999999999999999999886
No 431
>KOG0266 consensus WD40 repeat-containing protein [General function prediction only]
Probab=99.47 E-value=4.1e-13 Score=151.40 Aligned_cols=127 Identities=13% Similarity=0.179 Sum_probs=104.0
Q ss_pred hhhhhccccceEEeeeecc----CCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCC
Q 004989 582 GLCKYLSFSKLRVKADLNQ----GDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASR 656 (720)
Q Consensus 582 ~l~~~~~~~~~~~~~~l~~----~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~ 656 (720)
.|...+...++|+++.... ..+.+|.+.|+||+|+|+|+++++||.|++|||||+.++ .++..+ .|.
T Consensus 217 ~l~s~s~D~tiriwd~~~~~~~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~--------~~~~~l~~hs 288 (456)
T KOG0266|consen 217 YLLSGSDDKTLRIWDLKDDGRNLKTLKGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRTG--------ECVRKLKGHS 288 (456)
T ss_pred EEEEecCCceEEEeeccCCCeEEEEecCCCCceEEEEecCCCCEEEEecCCCcEEEEeccCC--------eEEEeeeccC
Confidence 3555566666776666222 456788999999999999999999999999999999885 244433 346
Q ss_pred CCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCc--EEEE---------EEEEeecCCceEEEecCcc-ceEE
Q 004989 657 SKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLI--YFSA---------LYCIVLNKLLIIFRYGMFQ-EVKY 717 (720)
Q Consensus 657 ~~i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~--~~~~---------v~~v~~~~~~~~~~~~~~~-~~~~ 717 (720)
+.|++++|+++ +++|+++++|++|+|||+.+|+ ++.+ ++++.|+|.+.++..+..| .+++
T Consensus 289 ~~is~~~f~~d-~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~~d~~~~~ 360 (456)
T KOG0266|consen 289 DGISGLAFSPD-GNLLVSASYDGTIRVWDLETGSKLCLKLLSGAENSAPVTSVQFSPNGKYLLSASLDRTLKL 360 (456)
T ss_pred CceEEEEECCC-CCEEEEcCCCccEEEEECCCCceeeeecccCCCCCCceeEEEECCCCcEEEEecCCCeEEE
Confidence 78999999995 5799999999999999999999 4443 6999999999999999999 6666
No 432
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.46 E-value=2.6e-14 Score=164.61 Aligned_cols=217 Identities=13% Similarity=0.157 Sum_probs=156.4
Q ss_pred ccchhhchhhhhhcccCC-CCCceecccceeecCCCCCcEEEEEec-CCCCHHHHH-hCCCCCCCHHHHHHHHHHHHHHH
Q 004989 58 NDFELRKHSDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWL-DKPKRSVDVYECLHIFRQIVEIV 134 (720)
Q Consensus 58 ~~~~~r~~~e~~~L~~l~-HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L-~~~~~~l~~~~~~~i~~QIl~aL 134 (720)
.+...+.-.|..+-..+. |+|++++++ ........++.++| .|+++.+.+ .......+...+..++.|+..+|
T Consensus 61 ~~~~~~i~~e~~~~~~~s~h~n~~~~~~----~~~~~~~~~~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l 136 (601)
T KOG0590|consen 61 EDSSEHIDTETDIQKKLSKHSNTVHMIE----PSSSPRSYLLSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGL 136 (601)
T ss_pred cchhhhcCccccccccccccccccccCC----ccCCCcccccccCcccccccccccccCCccCCCCcchhhhhhhhccCc
Confidence 333444445555555566 999999999 33444467999999 999999988 44443578889999999999999
Q ss_pred HHHH-HCCceeccCCCCcEEEccCC-ceEEeecCcccCCCC-CCcccccccccccccCCCCCCchhhhhhhhcccccccc
Q 004989 135 YAAH-SQGIVVHNVRPSCFVMSSFN-HVSFIESASCSDSGS-DSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQ 211 (720)
Q Consensus 135 ~yLH-s~gIvHrDLKP~NILl~~~~-~vkliDfg~a~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfg 211 (720)
.|+| ..++.||||||+|.+++.++ .+++.|||++..+.. ...+
T Consensus 137 ~~~H~~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~~g~~---------------------------------- 182 (601)
T KOG0590|consen 137 SYLHPENGVTHRDIKPSNSLLDESGSALKIADFGLATAYRNKNGAE---------------------------------- 182 (601)
T ss_pred cccCcccccccCCCCCccchhccCCCcccCCCchhhccccccCCcc----------------------------------
Confidence 9999 99999999999999999988 888888887744322 1000
Q ss_pred cccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCcccccccc-CCcccCcccccCCC-CC
Q 004989 212 LVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLME-TNWYASPEELAGAP-VS 289 (720)
Q Consensus 212 la~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~G-T~~Y~APE~l~~~~-~s 289 (720)
......+| ++.|+|||...+.. ..
T Consensus 183 ------------------------------------------------------~~~~~~~g~s~~y~a~E~~~~~~~~~ 208 (601)
T KOG0590|consen 183 ------------------------------------------------------RSLKDRCGSSPPYGAPEHLSGKAYRG 208 (601)
T ss_pred ------------------------------------------------------eeeecccCCCCCCCCcccccchhhcC
Confidence 00112467 99999999998854 68
Q ss_pred ccccchhhhchhhhccc---cCCCCchHHHH-HHHhhcC-C-CCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcc
Q 004989 290 CASDIYRLGVLLFELFC---PFSTGEEKTRT-MSSLRHR-V-LPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEF 363 (720)
Q Consensus 290 ~~sDIwSLGvll~eLlt---pf~~~~~~~~~-~~~l~~~-~-~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~ 363 (720)
+..|+||+|+++.-+++ |+......... ....... . ....+........+++.++|..+|..|.+.+++-.+||
T Consensus 209 ~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d~~ 288 (601)
T KOG0590|consen 209 PSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNKGRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKLDNW 288 (601)
T ss_pred CCcccccccccccccccCCCCccccccccccceeecccccccccCccccCChhhhhcccccccCCchhcccccccccccc
Confidence 89999999999999998 43322111111 1111111 1 11222233445569999999999999999999999999
Q ss_pred cCC
Q 004989 364 LNE 366 (720)
Q Consensus 364 ~~~ 366 (720)
+..
T Consensus 289 ~~~ 291 (601)
T KOG0590|consen 289 LSS 291 (601)
T ss_pred ccc
Confidence 998
No 433
>KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription]
Probab=99.46 E-value=2e-13 Score=152.35 Aligned_cols=127 Identities=13% Similarity=0.063 Sum_probs=104.4
Q ss_pred hhhhhhccccceEEeeeecc---CCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCC
Q 004989 581 EGLCKYLSFSKLRVKADLNQ---GDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASR 656 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~~---~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~ 656 (720)
.-|..+...++.|.+.-... -.+.||...|+.|.|+|.|-||||||.|++.++|..... +|...+ +|-
T Consensus 464 rfLlScSED~svRLWsl~t~s~~V~y~GH~~PVwdV~F~P~GyYFatas~D~tArLWs~d~~--------~PlRifaghl 535 (707)
T KOG0263|consen 464 RFLLSCSEDSSVRLWSLDTWSCLVIYKGHLAPVWDVQFAPRGYYFATASHDQTARLWSTDHN--------KPLRIFAGHL 535 (707)
T ss_pred cceeeccCCcceeeeecccceeEEEecCCCcceeeEEecCCceEEEecCCCceeeeeecccC--------Cchhhhcccc
Confidence 33555555555555554442 346689999999999999999999999999999997654 577554 457
Q ss_pred CCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceE
Q 004989 657 SKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 657 ~~i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
+.|.|+.|.|+ .+++|+||.|+|||+||+.+|..++- |.+++|+|++-++++|+=|-+.
T Consensus 536 sDV~cv~FHPN-s~Y~aTGSsD~tVRlWDv~~G~~VRiF~GH~~~V~al~~Sp~Gr~LaSg~ed~~I 601 (707)
T KOG0263|consen 536 SDVDCVSFHPN-SNYVATGSSDRTVRLWDVSTGNSVRIFTGHKGPVTALAFSPCGRYLASGDEDGLI 601 (707)
T ss_pred cccceEEECCc-ccccccCCCCceEEEEEcCCCcEEEEecCCCCceEEEEEcCCCceEeecccCCcE
Confidence 78999999995 67999999999999999999999875 8999999999999999877543
No 434
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.46 E-value=3e-13 Score=138.52 Aligned_cols=195 Identities=15% Similarity=0.129 Sum_probs=140.6
Q ss_pred CCcccccccccC----CCCCCcccccccccCCCCccchhhch-hhhhhcccCCCCCceecccceeecCCCCCcEEEEEec
Q 004989 28 SSRALNISGVSD----RNPRLLRGERFGVRGDDSNDFELRKH-SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW 102 (720)
Q Consensus 28 ~~~~~~~~~~~~----~~~~~~~~~r~~~~~~~~~~~~~r~~-~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~ 102 (720)
-++.+|-+.|+. .|.-.+.-.-|.|-...+..-.+|.| |--.+|. .-++|..+|. .+..+-+-.+|||+
T Consensus 32 VGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~APQLrdEYr~YKlL~--g~~GIP~vYY----FGqeG~~NiLVidL 105 (449)
T KOG1165|consen 32 VGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSEAPQLRDEYRTYKLLG--GTEGIPQVYY----FGQEGKYNILVIDL 105 (449)
T ss_pred eccccccCcceeeecccccccCceEEEEeccccCCcchHHHHHHHHHHHc--CCCCCCceee----eccccchhhhhhhh
Confidence 344555555443 33333333334455555555556666 5555665 4788888776 33333455899999
Q ss_pred CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccC-----CceEEeecCcccCCCCCCcc
Q 004989 103 GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSF-----NHVSFIESASCSDSGSDSHE 177 (720)
Q Consensus 103 ~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~-----~~vkliDfg~a~~~g~~~~~ 177 (720)
.|.+|.|++.--++.++...+..++.|++.-++|+|++.+|.|||||+|+||... +.+.++|||+|+.+..+...
T Consensus 106 LGPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~Tk 185 (449)
T KOG1165|consen 106 LGPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPKTK 185 (449)
T ss_pred hCcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchhhhcCcccc
Confidence 9999999987778889999999999999999999999999999999999999743 45888999888765444221
Q ss_pred cccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhh
Q 004989 178 EGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQV 257 (720)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~ 257 (720)
. +++..|.
T Consensus 186 q--------------------------------------------------------HIPYrE~---------------- 193 (449)
T KOG1165|consen 186 Q--------------------------------------------------------HIPYREH---------------- 193 (449)
T ss_pred c--------------------------------------------------------cCccccc----------------
Confidence 1 1111111
Q ss_pred hcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhccc---cCCCC
Q 004989 258 EEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTG 311 (720)
Q Consensus 258 ~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt---pf~~~ 311 (720)
....||..||+---..|...+..-|+=|||-++++.|- ||.+.
T Consensus 194 -----------KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGL 239 (449)
T KOG1165|consen 194 -----------KSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGL 239 (449)
T ss_pred -----------cccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccc
Confidence 12579999999998889989999999999988888777 66653
No 435
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.45 E-value=1.5e-14 Score=150.56 Aligned_cols=157 Identities=20% Similarity=0.318 Sum_probs=97.5
Q ss_pred EEEEEecCCCCHHHHHh---CCCC---CCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCccc
Q 004989 96 FVHAIEWGDVSLRQWLD---KPKR---SVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCS 169 (720)
Q Consensus 96 ~~lv~E~~ggsL~~~L~---~~~~---~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~ 169 (720)
.+++|+-..++|.+++. .... .+.....+.+..|++..+++||+.||||+||||+||+++.+|.+.|.||+...
T Consensus 114 ~~~l~P~~~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi~~~nfll~~~G~v~Lg~F~~~~ 193 (288)
T PF14531_consen 114 RFLLMPRAQGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDIKPENFLLDQDGGVFLGDFSSLV 193 (288)
T ss_dssp EEEEEE--SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEE-TTS-EEE--GGGEE
T ss_pred hhhccchhhhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEecccceeeEEEcCCCCEEEcChHHHe
Confidence 47788887889988862 1111 12333445666999999999999999999999999999999999998876553
Q ss_pred CCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccc
Q 004989 170 DSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILD 249 (720)
Q Consensus 170 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d 249 (720)
..|....
T Consensus 194 r~g~~~~------------------------------------------------------------------------- 200 (288)
T PF14531_consen 194 RAGTRYR------------------------------------------------------------------------- 200 (288)
T ss_dssp ETTEEEE-------------------------------------------------------------------------
T ss_pred ecCceee-------------------------------------------------------------------------
Confidence 2211100
Q ss_pred cccchhhhhcccCCCCccccccccCCcccCcccccCC--------CCCccccchhhhchhhhccc---cCCCCchHHHHH
Q 004989 250 NRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA--------PVSCASDIYRLGVLLFELFC---PFSTGEEKTRTM 318 (720)
Q Consensus 250 ~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~--------~~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~ 318 (720)
....+..|.+||..... .++.+.|.|+||+++|.|+| ||..........
T Consensus 201 --------------------~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~~~~~~~~~~ 260 (288)
T PF14531_consen 201 --------------------CSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLPFGLSSPEADPE 260 (288)
T ss_dssp --------------------GGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-STCCCGGGSTSG
T ss_pred --------------------ccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCCCCCCCcccccc
Confidence 01224678899877432 37899999999999999999 776543221100
Q ss_pred HHhhcCCCCccccccCchH-HHHHHHcCCCCCCCC
Q 004989 319 SSLRHRVLPPQLLLKFPKE-ASFCLWLLHPEPSGR 352 (720)
Q Consensus 319 ~~l~~~~~p~~~~~~~p~~-~~Li~~~L~~dP~~R 352 (720)
..+... . ..|+. ..||..||+++|.+|
T Consensus 261 ~~f~~C------~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 261 WDFSRC------R-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp GGGTTS------S----HHHHHHHHHHT-SSGGGS
T ss_pred ccchhc------C-CcCHHHHHHHHHHccCCcccC
Confidence 011111 1 23433 489999999999988
No 436
>KOG0283 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.45 E-value=2e-13 Score=153.61 Aligned_cols=112 Identities=16% Similarity=0.312 Sum_probs=90.6
Q ss_pred CCCC-CCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCc----------------------------ccc----c-----
Q 004989 601 GDLL-NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDA----------------------------IIN----E----- 642 (720)
Q Consensus 601 ~~~~-~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~----------------------------~~~----~----- 642 (720)
.++. .|.+.|.++.|++||+||||||.|+.||||.+.. ... .
T Consensus 260 Qe~~~ah~gaIw~mKFS~DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~~ 339 (712)
T KOG0283|consen 260 QEISNAHKGAIWAMKFSHDGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSSS 339 (712)
T ss_pred eccccccCCcEEEEEeCCCCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCcccccccccccccccc
Confidence 3455 7899999999999999999999999999998644 000 0
Q ss_pred -----cccc----------ccceEE-ecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE------EEEEee
Q 004989 643 -----NRDI----------HYPVVE-MASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA------LYCIVL 700 (720)
Q Consensus 643 -----~~~~----------~~~~~~-~~~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~------v~~v~~ 700 (720)
...+ ..|+.+ ++|...|..|+||.+ ++|.|+|.|+|||||++.+.+|+.. |+||+|
T Consensus 340 ~~~~~s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSKn--~fLLSSSMDKTVRLWh~~~~~CL~~F~HndfVTcVaF 417 (712)
T KOG0283|consen 340 RKGSQSPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSKN--NFLLSSSMDKTVRLWHPGRKECLKVFSHNDFVTCVAF 417 (712)
T ss_pred ccccCCccccCCCccccccccchhhhhccchhheecccccC--CeeEeccccccEEeecCCCcceeeEEecCCeeEEEEe
Confidence 0001 124444 356778999999984 5999999999999999999999998 899999
Q ss_pred cCC-ceEEEecCccc
Q 004989 701 NKL-LIIFRYGMFQE 714 (720)
Q Consensus 701 ~~~-~~~~~~~~~~~ 714 (720)
+|. ..++.+||+|-
T Consensus 418 nPvDDryFiSGSLD~ 432 (712)
T KOG0283|consen 418 NPVDDRYFISGSLDG 432 (712)
T ss_pred cccCCCcEeeccccc
Confidence 996 58999999984
No 437
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.44 E-value=1.4e-13 Score=136.77 Aligned_cols=101 Identities=10% Similarity=0.069 Sum_probs=78.3
Q ss_pred hhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHH-HHCCce
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAA-HSQGIV 143 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yL-Hs~gIv 143 (720)
.|..+|.++.|++|...+. .. .. ..++|||| .|++|...+... ..++..++..++.||+.+|.|+ |+.||+
T Consensus 68 ~E~~~l~~l~~~~v~~p~~-~~-~~----~~~iVmE~i~g~~l~~~~~~~-~~~~~~~~~~i~~qi~~~L~~l~H~~gii 140 (190)
T cd05147 68 KEMRNLKRLVTAGIPCPEP-IL-LK----SHVLVMEFIGDDGWAAPRLKD-APLSESKARELYLQVIQIMRILYQDCRLV 140 (190)
T ss_pred HHHHHHHHHHHCCCCCCcE-EE-ec----CCEEEEEEeCCCCCcchhhhc-CCCCHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 5778888888888744333 21 11 12799999 666665543232 3589999999999999999999 799999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCC
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSD 174 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~ 174 (720)
||||||+|||++ ++.++|+|||++...+.+
T Consensus 141 HrDlkP~NIli~-~~~v~LiDFG~a~~~~~~ 170 (190)
T cd05147 141 HADLSEYNLLYH-DGKLYIIDVSQSVEHDHP 170 (190)
T ss_pred cCCCCHHHEEEE-CCcEEEEEccccccCCCc
Confidence 999999999998 588999999999654433
No 438
>KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms]
Probab=99.44 E-value=8.2e-13 Score=131.67 Aligned_cols=106 Identities=12% Similarity=0.215 Sum_probs=89.6
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEE-ecCCCCEEEEEEecCCCCEEEEEeCCCcE
Q 004989 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVE-MASRSKLSSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~i~~l~w~~~~~~~laS~s~D~~v 681 (720)
|.||++.|..|+.++||.++.|||.|+++|+||+.++ .+... .+|...|.+|+|||+. .+|+|||.|+||
T Consensus 59 ~~GHsH~v~dv~~s~dg~~alS~swD~~lrlWDl~~g--------~~t~~f~GH~~dVlsva~s~dn-~qivSGSrDkTi 129 (315)
T KOG0279|consen 59 LTGHSHFVSDVVLSSDGNFALSASWDGTLRLWDLATG--------ESTRRFVGHTKDVLSVAFSTDN-RQIVSGSRDKTI 129 (315)
T ss_pred eeccceEecceEEccCCceEEeccccceEEEEEecCC--------cEEEEEEecCCceEEEEecCCC-ceeecCCCccee
Confidence 5678999999999999999999999999999999886 23433 3456679999999975 589999999999
Q ss_pred EEEECCCCcEEEE--------EEEEeecCC--ceEEEecCccceEE
Q 004989 682 QVGQVLHLIYFSA--------LYCIVLNKL--LIIFRYGMFQEVKY 717 (720)
Q Consensus 682 ~lWD~~tg~~~~~--------v~~v~~~~~--~~~~~~~~~~~~~~ 717 (720)
+|||+-.+....- |.||.|+|. ..+|++++-|+.-.
T Consensus 130 klwnt~g~ck~t~~~~~~~~WVscvrfsP~~~~p~Ivs~s~DktvK 175 (315)
T KOG0279|consen 130 KLWNTLGVCKYTIHEDSHREWVSCVRFSPNESNPIIVSASWDKTVK 175 (315)
T ss_pred eeeeecccEEEEEecCCCcCcEEEEEEcCCCCCcEEEEccCCceEE
Confidence 9999976543321 899999999 89999999998643
No 439
>KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification]
Probab=99.42 E-value=2.6e-13 Score=141.08 Aligned_cols=127 Identities=14% Similarity=0.149 Sum_probs=100.6
Q ss_pred cchhhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-C
Q 004989 577 NPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-S 655 (720)
Q Consensus 577 ~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~ 655 (720)
++-..+..|||.-+ +.++.... -+|+..|.+++|+|....|+|||.|++|+|||+....++ ..+. |
T Consensus 155 SgD~gG~iKyWqpn-mnnVk~~~----ahh~eaIRdlafSpnDskF~t~SdDg~ikiWdf~~~kee--------~vL~GH 221 (464)
T KOG0284|consen 155 SGDKGGMIKYWQPN-MNNVKIIQ----AHHAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFRMPKEE--------RVLRGH 221 (464)
T ss_pred EcCCCceEEecccc-hhhhHHhh----HhhhhhhheeccCCCCceeEEecCCCeEEEEeccCCchh--------heeccC
Confidence 33344577888764 33333332 135789999999999999999999999999998765322 1223 3
Q ss_pred CCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceEE
Q 004989 656 RSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 656 ~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
.-.|.||.|.|. +..|||+|.|..||+||.++|.|+.+ |..+.|++.++.+.++|=|..-.
T Consensus 222 gwdVksvdWHP~-kgLiasgskDnlVKlWDprSg~cl~tlh~HKntVl~~~f~~n~N~Llt~skD~~~k 289 (464)
T KOG0284|consen 222 GWDVKSVDWHPT-KGLIASGSKDNLVKLWDPRSGSCLATLHGHKNTVLAVKFNPNGNWLLTGSKDQSCK 289 (464)
T ss_pred CCCcceeccCCc-cceeEEccCCceeEeecCCCcchhhhhhhccceEEEEEEcCCCCeeEEccCCceEE
Confidence 556999999995 67999999999999999999999987 89999999999999999987643
No 440
>KOG0316 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.40 E-value=1.3e-12 Score=127.26 Aligned_cols=105 Identities=15% Similarity=0.122 Sum_probs=90.0
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCEEEEEEecCCCCEEEEEeCCCcE
Q 004989 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~l~w~~~~~~~laS~s~D~~v 681 (720)
|..+.+.|..+.|+.||.|.+|+|.|++||+|+...+. .+.+.. |...|..++-+.+. ..+|||+.|+.|
T Consensus 13 l~~~qgaV~avryN~dGnY~ltcGsdrtvrLWNp~rg~--------liktYsghG~EVlD~~~s~Dn-skf~s~GgDk~v 83 (307)
T KOG0316|consen 13 LDCAQGAVRAVRYNVDGNYCLTCGSDRTVRLWNPLRGA--------LIKTYSGHGHEVLDAALSSDN-SKFASCGGDKAV 83 (307)
T ss_pred ecccccceEEEEEccCCCEEEEcCCCceEEeecccccc--------eeeeecCCCceeeeccccccc-cccccCCCCceE
Confidence 44568999999999999999999999999999986652 344443 45569999888754 589999999999
Q ss_pred EEEECCCCcEEEE-------EEEEeecCCceEEEecCccceE
Q 004989 682 QVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 682 ~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
.+|||.||+.++. |+.|.||+..+++.+||||--.
T Consensus 84 ~vwDV~TGkv~Rr~rgH~aqVNtV~fNeesSVv~SgsfD~s~ 125 (307)
T KOG0316|consen 84 QVWDVNTGKVDRRFRGHLAQVNTVRFNEESSVVASGSFDSSV 125 (307)
T ss_pred EEEEcccCeeeeecccccceeeEEEecCcceEEEecccccee
Confidence 9999999999886 9999999999999999999643
No 441
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.40 E-value=4.8e-13 Score=133.00 Aligned_cols=100 Identities=13% Similarity=0.096 Sum_probs=78.4
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHH-HHhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CC
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQ-WLDKPKRSVDVYECLHIFRQIVEIVYAAHS-QG 141 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~-~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs-~g 141 (720)
.+|...+.++.|++|..... +.... .|+|||| .|+++.. .+.. ..++..++..++.|++.+|.++|+ +|
T Consensus 67 ~~E~~~l~~l~~~~i~~p~~-~~~~~-----~~lVmE~~~g~~~~~~~l~~--~~~~~~~~~~i~~~l~~~l~~lH~~~g 138 (190)
T cd05145 67 EKEFRNLKRLYEAGVPVPEP-ILLKK-----NVLVMEFIGDDGSPAPRLKD--VPLEEEEAEELYEQVVEQMRRLYQEAG 138 (190)
T ss_pred HHHHHHHHHHHhCCCCCceE-EEecC-----CEEEEEEecCCCchhhhhhh--ccCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 46778888999998754333 11111 3799999 6665443 3432 347889999999999999999999 99
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCC
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGS 173 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~ 173 (720)
|+||||||+|||++ ++.++|+|||++.....
T Consensus 139 ivHrDlkP~NIll~-~~~~~liDFG~a~~~~~ 169 (190)
T cd05145 139 LVHGDLSEYNILYH-DGKPYIIDVSQAVELDH 169 (190)
T ss_pred EecCCCChhhEEEE-CCCEEEEEcccceecCC
Confidence 99999999999998 89999999999966543
No 442
>KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.39 E-value=1.6e-12 Score=143.84 Aligned_cols=85 Identities=20% Similarity=0.301 Sum_probs=73.9
Q ss_pred CCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcE
Q 004989 602 DLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 602 ~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~v 681 (720)
...+|...+.|++++|||+++|||+.|++|||||..++. |-++.-.|++.|+.++|.. .++.|.|+|-||||
T Consensus 345 KQQgH~~~i~~l~YSpDgq~iaTG~eDgKVKvWn~~Sgf-------C~vTFteHts~Vt~v~f~~-~g~~llssSLDGtV 416 (893)
T KOG0291|consen 345 KQQGHSDRITSLAYSPDGQLIATGAEDGKVKVWNTQSGF-------CFVTFTEHTSGVTAVQFTA-RGNVLLSSSLDGTV 416 (893)
T ss_pred eccccccceeeEEECCCCcEEEeccCCCcEEEEeccCce-------EEEEeccCCCceEEEEEEe-cCCEEEEeecCCeE
Confidence 346789999999999999999999999999999988763 4455556788999999998 46799999999999
Q ss_pred EEEECCCCcEEEE
Q 004989 682 QVGQVLHLIYFSA 694 (720)
Q Consensus 682 ~lWD~~tg~~~~~ 694 (720)
|.||+....+.++
T Consensus 417 RAwDlkRYrNfRT 429 (893)
T KOG0291|consen 417 RAWDLKRYRNFRT 429 (893)
T ss_pred Eeeeecccceeee
Confidence 9999988877775
No 443
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.39 E-value=9e-13 Score=130.86 Aligned_cols=92 Identities=12% Similarity=0.126 Sum_probs=76.3
Q ss_pred hchhhhhhcccCC-CCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 63 RKHSDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~L~~l~-HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+..+|..+|.++. |++|+++++ + . ..|++||| .|.+|.+.+.. ....++.|++.+|.++|++
T Consensus 47 l~~rE~~iL~~L~~~~~vP~ll~-~---~----~~~lvmeyI~G~~L~~~~~~--------~~~~~~~qi~~~L~~lH~~ 110 (218)
T PRK12274 47 LARREALALRQLDGLPRTPRLLH-W---D----GRHLDRSYLAGAAMYQRPPR--------GDLAYFRAARRLLQQLHRC 110 (218)
T ss_pred HHHHHHHHHHhcCCCCCCCEEEE-E---c----CEEEEEeeecCccHHhhhhh--------hhHHHHHHHHHHHHHHHHC
Confidence 4568999999995 478999888 2 1 35899999 99999764411 1235789999999999999
Q ss_pred CceeccC-CCCcEEEccCCceEEeecCcccC
Q 004989 141 GIVVHNV-RPSCFVMSSFNHVSFIESASCSD 170 (720)
Q Consensus 141 gIvHrDL-KP~NILl~~~~~vkliDfg~a~~ 170 (720)
||+|||| ||+|||++.++.++|+|||++..
T Consensus 111 GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~ 141 (218)
T PRK12274 111 GVAHNDLAKEANWLVQEDGSPAVIDFQLAVR 141 (218)
T ss_pred cCccCCCCCcceEEEcCCCCEEEEECCCcee
Confidence 9999999 79999999999999999999964
No 444
>KOG0276 consensus Vesicle coat complex COPI, beta' subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.39 E-value=6.5e-13 Score=144.20 Aligned_cols=127 Identities=13% Similarity=0.126 Sum_probs=103.6
Q ss_pred ccchhhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECC-CCCEEEEeeCCCcEEEeeCCcccccccccccceEEec
Q 004989 576 INPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA 654 (720)
Q Consensus 576 ~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~-dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~ 654 (720)
|.+-.+-+.|+|.|.+- ++.- -.++||++.|.+|+|+| |...|||||.|+|||||.+.+. .|..++.
T Consensus 113 LtsSDDm~iKlW~we~~--wa~~--qtfeGH~HyVMqv~fnPkD~ntFaS~sLDrTVKVWslgs~--------~~nfTl~ 180 (794)
T KOG0276|consen 113 LTSSDDMTIKLWDWENE--WACE--QTFEGHEHYVMQVAFNPKDPNTFASASLDRTVKVWSLGSP--------HPNFTLE 180 (794)
T ss_pred EecCCccEEEEeeccCc--eeee--eEEcCcceEEEEEEecCCCccceeeeeccccEEEEEcCCC--------CCceeee
Confidence 44455667888888532 2222 34889999999999998 5678999999999999998665 2555554
Q ss_pred C-CCCEEEEEEec-CCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccc
Q 004989 655 S-RSKLSSICWNS-YIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 655 ~-~~~i~~l~w~~-~~~~~laS~s~D~~v~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~ 714 (720)
+ ...|+||++-+ .++.+|+||+.|.+|||||.+|.+|+++ |.++.|+|...+|.+||=|-
T Consensus 181 gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~CV~TLeGHt~Nvs~v~fhp~lpiiisgsEDG 249 (794)
T KOG0276|consen 181 GHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKSCVQTLEGHTNNVSFVFFHPELPIIISGSEDG 249 (794)
T ss_pred ccccCcceEEeccCCCcceEEecCCCceEEEeecchHHHHHHhhcccccceEEEecCCCcEEEEecCCc
Confidence 4 55699999976 3467999999999999999999999998 89999999999999999774
No 445
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.38 E-value=1.2e-12 Score=128.64 Aligned_cols=135 Identities=19% Similarity=0.213 Sum_probs=104.4
Q ss_pred cEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEc---cCCceEEeecCcccCC
Q 004989 95 PFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMS---SFNHVSFIESASCSDS 171 (720)
Q Consensus 95 ~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~---~~~~vkliDfg~a~~~ 171 (720)
+-.+||++.|.+|.+++.--.+.++...++.++-|++.-|+|+|.+++|||||||+|+|+. ..+.+.+||||+++.+
T Consensus 85 ynvlVMdLLGPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky 164 (341)
T KOG1163|consen 85 YNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKY 164 (341)
T ss_pred cceeeeeccCccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccchhhh
Confidence 4589999999999998865556699999999999999999999999999999999999996 4567899999988654
Q ss_pred CCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccc
Q 004989 172 GSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNR 251 (720)
Q Consensus 172 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g 251 (720)
-..... .+++..++
T Consensus 165 ~d~~t~--------------------------------------------------------~HIpyre~---------- 178 (341)
T KOG1163|consen 165 RDIRTR--------------------------------------------------------QHIPYRED---------- 178 (341)
T ss_pred cccccc--------------------------------------------------------ccCccccC----------
Confidence 221110 11111111
Q ss_pred cchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhccc---cCCCCc
Q 004989 252 VNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGE 312 (720)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt---pf~~~~ 312 (720)
....||..|.+--...+...+..-|+=|+|-+|.++.- ||.+..
T Consensus 179 -----------------r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglk 225 (341)
T KOG1163|consen 179 -----------------RNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLK 225 (341)
T ss_pred -----------------CccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccc
Confidence 22689999999888888778899999999966655444 777653
No 446
>KOG0295 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.38 E-value=3e-12 Score=131.62 Aligned_cols=119 Identities=13% Similarity=0.176 Sum_probs=98.3
Q ss_pred ccceEEeeeec---cCCCCCCCCCeEEEEECCC---------------CCEEEEeeCCCcEEEeeCCcccccccccccce
Q 004989 589 FSKLRVKADLN---QGDLLNSSNLVCSLSFDRD---------------GELFAAAGVNKKIKVFECDAIINENRDIHYPV 650 (720)
Q Consensus 589 ~~~~~~~~~l~---~~~~~~~~~~V~sv~f~~d---------------g~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~ 650 (720)
..+++++-.-. -..|..|...|-||+|-|+ |+++++||.||+||+||+.++. |..
T Consensus 256 dqtl~vW~~~t~~~k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~-------cL~ 328 (406)
T KOG0295|consen 256 DQTLRVWVVATKQCKAELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGM-------CLF 328 (406)
T ss_pred CceEEEEEeccchhhhhhhccccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCCe-------EEE
Confidence 34555544332 1456778999999999654 2588999999999999999872 444
Q ss_pred EEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccce
Q 004989 651 VEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 651 ~~~~~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
+..+|.++|+.++|+| +|.+|+|+..|+|++|||+.+++|..+ |+|++|....-+.++|+.|+-
T Consensus 329 tL~ghdnwVr~~af~p-~Gkyi~ScaDDktlrvwdl~~~~cmk~~~ah~hfvt~lDfh~~~p~VvTGsVdqt 399 (406)
T KOG0295|consen 329 TLVGHDNWVRGVAFSP-GGKYILSCADDKTLRVWDLKNLQCMKTLEAHEHFVTSLDFHKTAPYVVTGSVDQT 399 (406)
T ss_pred EEecccceeeeeEEcC-CCeEEEEEecCCcEEEEEeccceeeeccCCCcceeEEEecCCCCceEEeccccce
Confidence 5566788999999999 567999999999999999999999997 899999999999999999863
No 447
>KOG0313 consensus Microtubule binding protein YTM1 (contains WD40 repeats) [Cytoskeleton]
Probab=99.36 E-value=2.1e-12 Score=133.37 Aligned_cols=128 Identities=13% Similarity=0.128 Sum_probs=100.1
Q ss_pred hhhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceE-EecCCC
Q 004989 579 FLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVV-EMASRS 657 (720)
Q Consensus 579 ~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~-~~~~~~ 657 (720)
-.+...+-|...+.+.+.++.. .-..+||+.+|...+||+||.|+.||+||.+++. ..-+.. ..+|.+
T Consensus 278 SwDHTIk~WDletg~~~~~~~~------~ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~~-----gs~v~~s~~gH~n 346 (423)
T KOG0313|consen 278 SWDHTIKVWDLETGGLKSTLTT------NKSLNCISYSPLSKLLASGSSDRHIRLWDPRTGD-----GSVVSQSLIGHKN 346 (423)
T ss_pred cccceEEEEEeecccceeeeec------CcceeEeecccccceeeecCCCCceeecCCCCCC-----CceeEEeeecchh
Confidence 3444555555555555555543 4678999999999999999999999999999872 222333 356688
Q ss_pred CEEEEEEecCCCCEEEEEeCCCcEEEEECCCCc-EEEE-------EEEEeecCCceEEEecCccceEEc
Q 004989 658 KLSSICWNSYIKSQIASSNFEGVVQVGQVLHLI-YFSA-------LYCIVLNKLLIIFRYGMFQEVKYL 718 (720)
Q Consensus 658 ~i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~-~~~~-------v~~v~~~~~~~~~~~~~~~~~~~~ 718 (720)
.|+.|.|+|-+-.+|+|+|||++|||||+++-+ .+.+ |+||+|+.. .+|++|..|.-.+.
T Consensus 347 wVssvkwsp~~~~~~~S~S~D~t~klWDvRS~k~plydI~~h~DKvl~vdW~~~-~~IvSGGaD~~l~i 414 (423)
T KOG0313|consen 347 WVSSVKWSPTNEFQLVSGSYDNTVKLWDVRSTKAPLYDIAGHNDKVLSVDWNEG-GLIVSGGADNKLRI 414 (423)
T ss_pred hhhheecCCCCceEEEEEecCCeEEEEEeccCCCcceeeccCCceEEEEeccCC-ceEEeccCcceEEE
Confidence 999999999999999999999999999999887 6665 899999975 46788888865543
No 448
>KOG0285 consensus Pleiotropic regulator 1 [RNA processing and modification]
Probab=99.36 E-value=2.6e-12 Score=131.60 Aligned_cols=108 Identities=14% Similarity=0.145 Sum_probs=93.4
Q ss_pred CCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCEEEEEEecCCCCEEEEEeCCC
Q 004989 601 GDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEG 679 (720)
Q Consensus 601 ~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~l~w~~~~~~~laS~s~D~ 679 (720)
+-+.+|.+||.||+++|-++.|||||.|++|+|||++++. ....++ |-..|..|++|+-+ .||-|++.|+
T Consensus 145 rVi~gHlgWVr~vavdP~n~wf~tgs~DrtikIwDlatg~--------LkltltGhi~~vr~vavS~rH-pYlFs~gedk 215 (460)
T KOG0285|consen 145 RVISGHLGWVRSVAVDPGNEWFATGSADRTIKIWDLATGQ--------LKLTLTGHIETVRGVAVSKRH-PYLFSAGEDK 215 (460)
T ss_pred hhhhhccceEEEEeeCCCceeEEecCCCceeEEEEcccCe--------EEEeecchhheeeeeeecccC-ceEEEecCCC
Confidence 3466789999999999999999999999999999999872 222333 46779999999966 4999999999
Q ss_pred cEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceEE
Q 004989 680 VVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 680 ~v~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
.||-||+...+.|+. |+|++..|..-.+.+|+=|-+..
T Consensus 216 ~VKCwDLe~nkvIR~YhGHlS~V~~L~lhPTldvl~t~grDst~R 260 (460)
T KOG0285|consen 216 QVKCWDLEYNKVIRHYHGHLSGVYCLDLHPTLDVLVTGGRDSTIR 260 (460)
T ss_pred eeEEEechhhhhHHHhccccceeEEEeccccceeEEecCCcceEE
Confidence 999999999998876 99999999999999999887653
No 449
>KOG0282 consensus mRNA splicing factor [Function unknown]
Probab=99.34 E-value=8.4e-13 Score=140.04 Aligned_cols=107 Identities=14% Similarity=0.174 Sum_probs=92.0
Q ss_pred CCCCCCCCCeEEEEECC-CCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCC
Q 004989 601 GDLLNSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEG 679 (720)
Q Consensus 601 ~~~~~~~~~V~sv~f~~-dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~ 679 (720)
..+.||+..|+++.|-| .+.+|++||.|++|+|||+..- .+|-.+.+.|+..|..++||+. +..+.|+|||+
T Consensus 208 ~~~~gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~~------~~~lrtf~gH~k~Vrd~~~s~~-g~~fLS~sfD~ 280 (503)
T KOG0282|consen 208 HNLSGHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDD------RRCLRTFKGHRKPVRDASFNNC-GTSFLSASFDR 280 (503)
T ss_pred eeccCCccccchhhhccceeeEEEecCCCceEEEEEEecC------cceehhhhcchhhhhhhhcccc-CCeeeeeecce
Confidence 35678899999999999 9999999999999999997552 2233344566777999999985 56889999999
Q ss_pred cEEEEECCCCcEEEE------EEEEeecCCc-eEEEecCccc
Q 004989 680 VVQVGQVLHLIYFSA------LYCIVLNKLL-IIFRYGMFQE 714 (720)
Q Consensus 680 ~v~lWD~~tg~~~~~------v~~v~~~~~~-~~~~~~~~~~ 714 (720)
+||+||++||+++.. ++||.|+|.. +++.-|++|.
T Consensus 281 ~lKlwDtETG~~~~~f~~~~~~~cvkf~pd~~n~fl~G~sd~ 322 (503)
T KOG0282|consen 281 FLKLWDTETGQVLSRFHLDKVPTCVKFHPDNQNIFLVGGSDK 322 (503)
T ss_pred eeeeeccccceEEEEEecCCCceeeecCCCCCcEEEEecCCC
Confidence 999999999999987 7999999999 9999999886
No 450
>KOG0265 consensus U5 snRNP-specific protein-like factor and related proteins [RNA processing and modification]
Probab=99.33 E-value=9.6e-12 Score=125.23 Aligned_cols=87 Identities=15% Similarity=0.087 Sum_probs=70.1
Q ss_pred CCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCc
Q 004989 601 GDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGV 680 (720)
Q Consensus 601 ~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~ 680 (720)
..+.||.+.|+.+.|+|||.+|||||.|+.|-+|+...-++... +.-.|.+.|..|.|+++ +++|.|++.|++
T Consensus 41 m~l~gh~geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~gdceN~~------~lkgHsgAVM~l~~~~d-~s~i~S~gtDk~ 113 (338)
T KOG0265|consen 41 MLLPGHKGEIYTIKFHPDGSCFASGGSDRAIVLWNVYGDCENFW------VLKGHSGAVMELHGMRD-GSHILSCGTDKT 113 (338)
T ss_pred hhcCCCcceEEEEEECCCCCeEeecCCcceEEEEecccccccee------eeccccceeEeeeeccC-CCEEEEecCCce
Confidence 45678999999999999999999999999999999533211111 11145778999999994 679999999999
Q ss_pred EEEEECCCCcEEEE
Q 004989 681 VQVGQVLHLIYFSA 694 (720)
Q Consensus 681 v~lWD~~tg~~~~~ 694 (720)
|+.||++||+++..
T Consensus 114 v~~wD~~tG~~~rk 127 (338)
T KOG0265|consen 114 VRGWDAETGKRIRK 127 (338)
T ss_pred EEEEecccceeeeh
Confidence 99999999998874
No 451
>PTZ00420 coronin; Provisional
Probab=99.30 E-value=2.3e-11 Score=138.54 Aligned_cols=103 Identities=11% Similarity=0.119 Sum_probs=84.9
Q ss_pred CCCCCCCeEEEEECCCCCE-EEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcE
Q 004989 603 LLNSSNLVCSLSFDRDGEL-FAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~-lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~v 681 (720)
+.+|...|.+|+|+|++.. |||||.|++|+|||+++.. .+..+.+...|.+++|+|+ +++||+++.|++|
T Consensus 121 L~gH~~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~--------~~~~i~~~~~V~Slswspd-G~lLat~s~D~~I 191 (568)
T PTZ00420 121 LKGHKKKISIIDWNPMNYYIMCSSGFDSFVNIWDIENEK--------RAFQINMPKKLSSLKWNIK-GNLLSGTCVGKHM 191 (568)
T ss_pred eecCCCcEEEEEECCCCCeEEEEEeCCCeEEEEECCCCc--------EEEEEecCCcEEEEEECCC-CCEEEEEecCCEE
Confidence 4577899999999999985 6899999999999998762 2333445567999999995 5699999999999
Q ss_pred EEEECCCCcEEEE------------EEEEeecCCceEEEecCccc
Q 004989 682 QVGQVLHLIYFSA------------LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 682 ~lWD~~tg~~~~~------------v~~v~~~~~~~~~~~~~~~~ 714 (720)
+|||+++++.+.+ +++..|++....+.++.||.
T Consensus 192 rIwD~Rsg~~i~tl~gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~ 236 (568)
T PTZ00420 192 HIIDPRKQEIASSFHIHDGGKNTKNIWIDGLGGDDNYILSTGFSK 236 (568)
T ss_pred EEEECCCCcEEEEEecccCCceeEEEEeeeEcCCCCEEEEEEcCC
Confidence 9999999988765 35556778888899988884
No 452
>KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.29 E-value=1.5e-11 Score=136.39 Aligned_cols=125 Identities=15% Similarity=0.196 Sum_probs=108.0
Q ss_pred hhhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCC
Q 004989 579 FLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRS 657 (720)
Q Consensus 579 ~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~ 657 (720)
-.+.++|.|+.-.+++.++|+ ||...|.||.|+|..+++||+|.|+|||||.+.+. .++..+. |.+
T Consensus 482 SqDktaKiW~le~~~l~~vLs-----GH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~f--------SClkT~eGH~~ 548 (775)
T KOG0319|consen 482 SQDKTAKIWDLEQLRLLGVLS-----GHTRGVWCVSFSKNDQLLATCSGDKTVKIWSISTF--------SCLKTFEGHTS 548 (775)
T ss_pred ccccceeeecccCceEEEEee-----CCccceEEEEeccccceeEeccCCceEEEEEeccc--------eeeeeecCccc
Confidence 355688888888777777775 56999999999999999999999999999999887 3566665 578
Q ss_pred CEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceEE
Q 004989 658 KLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 658 ~i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
.|..++|-.++ ..|+||+.||.||||++.|+.|+++ ||..+-++....+.+|.-|-+.-
T Consensus 549 aVlra~F~~~~-~qliS~~adGliKlWnikt~eC~~tlD~H~DrvWaL~~~~~~~~~~tgg~Dg~i~ 614 (775)
T KOG0319|consen 549 AVLRASFIRNG-KQLISAGADGLIKLWNIKTNECEMTLDAHNDRVWALSVSPLLDMFVTGGGDGRII 614 (775)
T ss_pred eeEeeeeeeCC-cEEEeccCCCcEEEEeccchhhhhhhhhccceeEEEeecCccceeEecCCCeEEE
Confidence 89999998755 5899999999999999999999998 99999999999999988876543
No 453
>KOG0645 consensus WD40 repeat protein [General function prediction only]
Probab=99.29 E-value=3.6e-11 Score=119.62 Aligned_cols=116 Identities=11% Similarity=0.180 Sum_probs=89.4
Q ss_pred cceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCC
Q 004989 590 SKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIK 669 (720)
Q Consensus 590 ~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~ 669 (720)
..|+.+++| +||.+.|.||+|+++|.||||+|.||.|=||+..... +..|--+.-.|...|.-|.|.| ..
T Consensus 93 ~efecv~~l-----EGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~dedd----Efec~aVL~~HtqDVK~V~WHP-t~ 162 (312)
T KOG0645|consen 93 GEFECVATL-----EGHENEVKCVAWSASGNYLATCSRDKSVWIWEIDEDD----EFECIAVLQEHTQDVKHVIWHP-TE 162 (312)
T ss_pred CceeEEeee-----eccccceeEEEEcCCCCEEEEeeCCCeEEEEEecCCC----cEEEEeeeccccccccEEEEcC-Cc
Confidence 456777776 6679999999999999999999999999999976321 1112112234567799999999 45
Q ss_pred CEEEEEeCCCcEEEEECCCC---cEEE-------EEEEEeecCCceEEEecCccce
Q 004989 670 SQIASSNFEGVVQVGQVLHL---IYFS-------ALYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 670 ~~laS~s~D~~v~lWD~~tg---~~~~-------~v~~v~~~~~~~~~~~~~~~~~ 715 (720)
.+|+|+|||.|||+|+-..+ +|++ ||||++|++.+.-.++++-|--
T Consensus 163 dlL~S~SYDnTIk~~~~~~dddW~c~~tl~g~~~TVW~~~F~~~G~rl~s~sdD~t 218 (312)
T KOG0645|consen 163 DLLFSCSYDNTIKVYRDEDDDDWECVQTLDGHENTVWSLAFDNIGSRLVSCSDDGT 218 (312)
T ss_pred ceeEEeccCCeEEEEeecCCCCeeEEEEecCccceEEEEEecCCCceEEEecCCcc
Confidence 69999999999999976622 3344 3999999999988788776643
No 454
>KOG0285 consensus Pleiotropic regulator 1 [RNA processing and modification]
Probab=99.29 E-value=1.1e-11 Score=126.98 Aligned_cols=128 Identities=11% Similarity=0.105 Sum_probs=106.3
Q ss_pred ccchhhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-
Q 004989 576 INPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA- 654 (720)
Q Consensus 576 ~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~- 654 (720)
+.+-.+.+.|+|..-.-++| +++.||-+.|.|++.+|.-+.|+|||.|.+|||||+++. .+|..|.
T Consensus 209 Fs~gedk~VKCwDLe~nkvI-----R~YhGHlS~V~~L~lhPTldvl~t~grDst~RvWDiRtr--------~~V~~l~G 275 (460)
T KOG0285|consen 209 FSAGEDKQVKCWDLEYNKVI-----RHYHGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRTR--------ASVHVLSG 275 (460)
T ss_pred EEecCCCeeEEEechhhhhH-----HHhccccceeEEEeccccceeEEecCCcceEEEeeeccc--------ceEEEecC
Confidence 44445567777776444444 335677899999999999999999999999999999987 3565665
Q ss_pred CCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceEE
Q 004989 655 SRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 655 ~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
|++.|..|.++|.+. .++|||.|+||++||++.|+...+ |.|++.+|..+.+++++-|-.|.
T Consensus 276 H~~~V~~V~~~~~dp-qvit~S~D~tvrlWDl~agkt~~tlt~hkksvral~lhP~e~~fASas~dnik~ 344 (460)
T KOG0285|consen 276 HTNPVASVMCQPTDP-QVITGSHDSTVRLWDLRAGKTMITLTHHKKSVRALCLHPKENLFASASPDNIKQ 344 (460)
T ss_pred CCCcceeEEeecCCC-ceEEecCCceEEEeeeccCceeEeeecccceeeEEecCCchhhhhccCCcccee
Confidence 588899999999765 789999999999999999998776 88999999999999999887763
No 455
>KOG0647 consensus mRNA export protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.27 E-value=2.2e-11 Score=122.74 Aligned_cols=103 Identities=12% Similarity=0.208 Sum_probs=82.8
Q ss_pred CCCeEEEEECC-CCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEE
Q 004989 607 SNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQ 685 (720)
Q Consensus 607 ~~~V~sv~f~~-dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD 685 (720)
.+-|++|+||| ..-++|.||.|++||+||+.... . -.|.....+.+.|.++||+.+ ++.+++|+.||.+|+||
T Consensus 27 ~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g-~----~~~ka~~~~~~PvL~v~Wsdd-gskVf~g~~Dk~~k~wD 100 (347)
T KOG0647|consen 27 EDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSG-Q----LVPKAQQSHDGPVLDVCWSDD-GSKVFSGGCDKQAKLWD 100 (347)
T ss_pred ccchheeEeccccCceEEecccCCceEEEEEecCC-c----ccchhhhccCCCeEEEEEccC-CceEEeeccCCceEEEE
Confidence 46799999999 44567899999999999987630 0 123333345788999999985 57999999999999999
Q ss_pred CCCCcEEEE------EEEEeecCCce--EEEecCccce
Q 004989 686 VLHLIYFSA------LYCIVLNKLLI--IFRYGMFQEV 715 (720)
Q Consensus 686 ~~tg~~~~~------v~~v~~~~~~~--~~~~~~~~~~ 715 (720)
+.+||..+- |-+++|=+... ++++||+|+-
T Consensus 101 L~S~Q~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKT 138 (347)
T KOG0647|consen 101 LASGQVSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKT 138 (347)
T ss_pred ccCCCeeeeeecccceeEEEEecCCCcceeEecccccc
Confidence 999987654 88889966666 9999999984
No 456
>PTZ00421 coronin; Provisional
Probab=99.27 E-value=4.4e-11 Score=135.24 Aligned_cols=102 Identities=15% Similarity=0.151 Sum_probs=82.0
Q ss_pred CCCCCCCCeEEEEECCCC-CEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCEEEEEEecCCCCEEEEEeCCC
Q 004989 602 DLLNSSNLVCSLSFDRDG-ELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEG 679 (720)
Q Consensus 602 ~~~~~~~~V~sv~f~~dg-~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~l~w~~~~~~~laS~s~D~ 679 (720)
.|.+|...|.+|+|+|++ .+|||||.|++|+|||+.+. .++..+. |...|.+|+|+|+ +++|||++.||
T Consensus 120 ~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg--------~~~~~l~~h~~~V~sla~spd-G~lLatgs~Dg 190 (493)
T PTZ00421 120 HLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERG--------KAVEVIKCHSDQITSLEWNLD-GSLLCTTSKDK 190 (493)
T ss_pred EecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCC--------eEEEEEcCCCCceEEEEEECC-CCEEEEecCCC
Confidence 356789999999999986 69999999999999999865 2344443 4667999999995 57999999999
Q ss_pred cEEEEECCCCcEEEEE--------EEEeecCCceEEEecCc
Q 004989 680 VVQVGQVLHLIYFSAL--------YCIVLNKLLIIFRYGMF 712 (720)
Q Consensus 680 ~v~lWD~~tg~~~~~v--------~~v~~~~~~~~~~~~~~ 712 (720)
+|+|||+++++.+.++ .++.|.+....+.+..|
T Consensus 191 ~IrIwD~rsg~~v~tl~~H~~~~~~~~~w~~~~~~ivt~G~ 231 (493)
T PTZ00421 191 KLNIIDPRDGTIVSSVEAHASAKSQRCLWAKRKDLIITLGC 231 (493)
T ss_pred EEEEEECCCCcEEEEEecCCCCcceEEEEcCCCCeEEEEec
Confidence 9999999999988762 35677777666665444
No 457
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.26 E-value=1.2e-11 Score=127.55 Aligned_cols=102 Identities=10% Similarity=0.028 Sum_probs=78.8
Q ss_pred hchhhhhhcccCCCCCc--eecccceeecCCCCCcEEEEEec-CC-CCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRN--QGGLSGVCENEAAIDPFVHAIEW-GD-VSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnI--V~l~~~~~~~~~~~~~~~lv~E~-~g-gsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
|..+|..++.++.|++| +..++.........+..+++||+ .| .+|.+++... .+++. .+.||+.+|.+||
T Consensus 86 r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~~~~~~~~lV~e~l~G~~~L~~~l~~~--~l~~~----~~~~i~~~l~~lH 159 (239)
T PRK01723 86 RAFAEFRLLAQLYEAGLPVPRPIAARVVRHGLFYRADILIERIEGARDLVALLQEA--PLSEE----QWQAIGQLIARFH 159 (239)
T ss_pred HHHHHHHHHHHHHhCCCCCceeEeeeeeecCcceeeeEEEEecCCCCCHHHHHhcC--CCCHH----HHHHHHHHHHHHH
Confidence 45578889999999886 56666323222222234699999 65 7999988542 35554 3678999999999
Q ss_pred HCCceeccCCCCcEEEccCCceEEeecCcccC
Q 004989 139 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSD 170 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~~~~~vkliDfg~a~~ 170 (720)
++||+||||||.|||++.++.++|+|||.+..
T Consensus 160 ~~GI~HrDlkp~NILv~~~~~v~LIDfg~~~~ 191 (239)
T PRK01723 160 DAGVYHADLNAHNILLDPDGKFWLIDFDRGEL 191 (239)
T ss_pred HCCCCCCCCCchhEEEcCCCCEEEEECCCccc
Confidence 99999999999999999989999999998855
No 458
>KOG0286 consensus G-protein beta subunit [General function prediction only]
Probab=99.25 E-value=3.9e-11 Score=120.49 Aligned_cols=119 Identities=14% Similarity=0.159 Sum_probs=98.7
Q ss_pred chhhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECC-CCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cC
Q 004989 578 PFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-AS 655 (720)
Q Consensus 578 ~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~-dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~ 655 (720)
.-.+..|.+|..-+.+.+..+ .||++-|.+++++| ++..|+|||.|++.+|||++.+ ..++.+ +|
T Consensus 162 ~SGD~TCalWDie~g~~~~~f-----~GH~gDV~slsl~p~~~ntFvSg~cD~~aklWD~R~~--------~c~qtF~gh 228 (343)
T KOG0286|consen 162 GSGDMTCALWDIETGQQTQVF-----HGHTGDVMSLSLSPSDGNTFVSGGCDKSAKLWDVRSG--------QCVQTFEGH 228 (343)
T ss_pred cCCCceEEEEEcccceEEEEe-----cCCcccEEEEecCCCCCCeEEecccccceeeeeccCc--------ceeEeeccc
Confidence 344556777777666555554 57799999999999 9999999999999999998876 345554 45
Q ss_pred CCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE---------EEEEeecCCceEEEec
Q 004989 656 RSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA---------LYCIVLNKLLIIFRYG 710 (720)
Q Consensus 656 ~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~---------v~~v~~~~~~~~~~~~ 710 (720)
.+.|+.|+|-|. +.-+||||.|+|+|++|++..+.+.. |++|+||..+-+.-.|
T Consensus 229 esDINsv~ffP~-G~afatGSDD~tcRlyDlRaD~~~a~ys~~~~~~gitSv~FS~SGRlLfag 291 (343)
T KOG0286|consen 229 ESDINSVRFFPS-GDAFATGSDDATCRLYDLRADQELAVYSHDSIICGITSVAFSKSGRLLFAG 291 (343)
T ss_pred ccccceEEEccC-CCeeeecCCCceeEEEeecCCcEEeeeccCcccCCceeEEEcccccEEEee
Confidence 788999999995 56899999999999999999998876 8999999888776655
No 459
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.25 E-value=1.1e-11 Score=137.29 Aligned_cols=218 Identities=17% Similarity=0.131 Sum_probs=158.6
Q ss_pred chhhchhhhhhcccCC-CCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHH----HH
Q 004989 60 FELRKHSDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVE----IV 134 (720)
Q Consensus 60 ~~~r~~~e~~~L~~l~-HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~----aL 134 (720)
..+|+.+|+.-...++ |+|.++.+..+. ... +.|+-+|++|.+|.++......-++...++.++.+... ||
T Consensus 160 ~~~~k~~~~~s~~~i~~~~~~v~~~~~~e-~~~---~lfiqtE~~~~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al 235 (524)
T KOG0601|consen 160 DSKRKLREFLSHHKIDSHENPVRDSPAWE-GSG---ILFIQTELCGESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTAL 235 (524)
T ss_pred ccccccchhhcccccCccccccccCcccc-cCC---cceeeeccccchhHHhhhcccccCCchhhhhHHhhhhhcccccc
Confidence 4456667765555543 999999888333 332 57999999999999998776666899999999999999 99
Q ss_pred HHHHHCCceeccCCCCcEEEccC-CceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccc
Q 004989 135 YAAHSQGIVVHNVRPSCFVMSSF-NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLV 213 (720)
Q Consensus 135 ~yLHs~gIvHrDLKP~NILl~~~-~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla 213 (720)
.++|+.+++|-|+||+||++..+ ...++.|||....++... | +
T Consensus 236 ~~~hs~~~~~~~~kp~~i~~~~~~~s~~~~df~~v~~i~~~~----------------------------------~--~ 279 (524)
T KOG0601|consen 236 SHLHSNNIVHDDLKPANIFTTSDWTSCKLTDFGLVSKISDGN----------------------------------F--S 279 (524)
T ss_pred cccCCCcccccccchhheecccccceeecCCcceeEEccCCc----------------------------------c--c
Confidence 99999999999999999999988 778888887765443321 1 1
Q ss_pred cCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCcccc
Q 004989 214 TAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASD 293 (720)
Q Consensus 214 ~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sD 293 (720)
.... ......|...|++||.+.+. ++++.|
T Consensus 280 ~~~~-------------------------------------------------~~~r~~~~~~Y~~ke~~~~l-~~~~~d 309 (524)
T KOG0601|consen 280 SVFK-------------------------------------------------VSKRPEGDCIYAAKELLNGL-ATFASD 309 (524)
T ss_pred ccee-------------------------------------------------eeecCCCCceEeChhhhccc-cchHhh
Confidence 0000 00012467789999999777 899999
Q ss_pred chhhhchhhhccccCCCC-chHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 294 IYRLGVLLFELFCPFSTG-EEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 294 IwSLGvll~eLltpf~~~-~~~~~~~~~l~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
||+||.++.+..+.+... ......+..+++..+|..+.... ......+..|+..+|-.|+++..+++|+++...
T Consensus 310 i~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~ 385 (524)
T KOG0601|consen 310 IFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSK 385 (524)
T ss_pred hcchhhhhHhhHhhcccccCCCCCCccccccccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccch
Confidence 999999999877732211 11112234455555666554332 333368889999999999999999999999854
No 460
>KOG0303 consensus Actin-binding protein Coronin, contains WD40 repeats [Cytoskeleton]
Probab=99.24 E-value=1.9e-11 Score=126.96 Aligned_cols=112 Identities=14% Similarity=0.179 Sum_probs=95.4
Q ss_pred CCCCCCCCeEEEEECCCCC-EEEEeeCCCcEEEeeCCcccccccccccceEEecCCC-CEEEEEEecCCCCEEEEEeCCC
Q 004989 602 DLLNSSNLVCSLSFDRDGE-LFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRS-KLSSICWNSYIKSQIASSNFEG 679 (720)
Q Consensus 602 ~~~~~~~~V~sv~f~~dg~-~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~-~i~~l~w~~~~~~~laS~s~D~ 679 (720)
-+-||+..|..++|+|-++ .|||||.|-+|+||++-... ...+...|++++.++. +|--|.|.|--.|.|+|+++|.
T Consensus 76 ~v~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~-l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn 154 (472)
T KOG0303|consen 76 LVCGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENG-LTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDN 154 (472)
T ss_pred CccCccccccccccCccCCceeecCCCCceEEEEECCCcc-cccCcccceEEEeecceeEEEEeecccchhhHhhccCCc
Confidence 3568999999999999665 69999999999999975321 1123335898887644 5999999999999999999999
Q ss_pred cEEEEECCCCcEEEE------EEEEeecCCceEEEecCccc
Q 004989 680 VVQVGQVLHLIYFSA------LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 680 ~v~lWD~~tg~~~~~------v~~v~~~~~~~~~~~~~~~~ 714 (720)
+|.|||+.||+.+-+ ||+++||..++.+.+..=|+
T Consensus 155 ~v~iWnv~tgeali~l~hpd~i~S~sfn~dGs~l~TtckDK 195 (472)
T KOG0303|consen 155 TVSIWNVGTGEALITLDHPDMVYSMSFNRDGSLLCTTCKDK 195 (472)
T ss_pred eEEEEeccCCceeeecCCCCeEEEEEeccCCceeeeecccc
Confidence 999999999998876 99999999999999998776
No 461
>KOG0286 consensus G-protein beta subunit [General function prediction only]
Probab=99.23 E-value=7e-11 Score=118.64 Aligned_cols=108 Identities=7% Similarity=0.016 Sum_probs=93.2
Q ss_pred CCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCC
Q 004989 601 GDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEG 679 (720)
Q Consensus 601 ~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~w~~~~~~~laS~s~D~ 679 (720)
..|.+|++.++|+.|-+| ..|+|||-|.|+-+||+.++. .+..+ +|.+.|.+|+++|.+.+.++||+.|+
T Consensus 139 r~l~gHtgylScC~f~dD-~~ilT~SGD~TCalWDie~g~--------~~~~f~GH~gDV~slsl~p~~~ntFvSg~cD~ 209 (343)
T KOG0286|consen 139 RELAGHTGYLSCCRFLDD-NHILTGSGDMTCALWDIETGQ--------QTQVFHGHTGDVMSLSLSPSDGNTFVSGGCDK 209 (343)
T ss_pred eeecCccceeEEEEEcCC-CceEecCCCceEEEEEcccce--------EEEEecCCcccEEEEecCCCCCCeEEeccccc
Confidence 346778999999999884 467788999999999998872 33333 45778999999997788999999999
Q ss_pred cEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceEE
Q 004989 680 VVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 680 ~v~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
+.+|||++.|.|.++ |++|.|.|.+-.+++||=|..-.
T Consensus 210 ~aklWD~R~~~c~qtF~ghesDINsv~ffP~G~afatGSDD~tcR 254 (343)
T KOG0286|consen 210 SAKLWDVRSGQCVQTFEGHESDINSVRFFPSGDAFATGSDDATCR 254 (343)
T ss_pred ceeeeeccCcceeEeecccccccceEEEccCCCeeeecCCCceeE
Confidence 999999999999998 89999999999999999876543
No 462
>KOG0283 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.23 E-value=2.3e-11 Score=137.06 Aligned_cols=104 Identities=9% Similarity=0.143 Sum_probs=92.7
Q ss_pred CCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcE
Q 004989 602 DLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 602 ~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~v 681 (720)
.+.||+.-|..|+|+.++ +|+|+|+|||||+|++... .++..+.|.+-|+||+|+|.+.++++|||-||.|
T Consensus 364 ef~GHt~DILDlSWSKn~-fLLSSSMDKTVRLWh~~~~--------~CL~~F~HndfVTcVaFnPvDDryFiSGSLD~Kv 434 (712)
T KOG0283|consen 364 EFKGHTADILDLSWSKNN-FLLSSSMDKTVRLWHPGRK--------ECLKVFSHNDFVTCVAFNPVDDRYFISGSLDGKV 434 (712)
T ss_pred hhhccchhheecccccCC-eeEeccccccEEeecCCCc--------ceeeEEecCCeeEEEEecccCCCcEeecccccce
Confidence 456779999999999854 8899999999999998755 5677888999999999999999999999999999
Q ss_pred EEEECCCCcEEEE------EEEEeecCCceEEEecCccc
Q 004989 682 QVGQVLHLIYFSA------LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 682 ~lWD~~tg~~~~~------v~~v~~~~~~~~~~~~~~~~ 714 (720)
|||++...+.+.. |++|.|.|.|.+.+=|+|+=
T Consensus 435 RiWsI~d~~Vv~W~Dl~~lITAvcy~PdGk~avIGt~~G 473 (712)
T KOG0283|consen 435 RLWSISDKKVVDWNDLRDLITAVCYSPDGKGAVIGTFNG 473 (712)
T ss_pred EEeecCcCeeEeehhhhhhheeEEeccCCceEEEEEecc
Confidence 9999988877664 89999999999999999874
No 463
>KOG0275 consensus Conserved WD40 repeat-containing protein [General function prediction only]
Probab=99.23 E-value=3e-12 Score=129.38 Aligned_cols=125 Identities=17% Similarity=0.237 Sum_probs=107.2
Q ss_pred hhhhhhccccceEEeeeecc---CCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe--cC
Q 004989 581 EGLCKYLSFSKLRVKADLNQ---GDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM--AS 655 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~~---~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~--~~ 655 (720)
+++...|.|.+.|+..+|++ ..|..+...|.|+.|++|.+++|||+.||+||||-+.++. ++..+ .|
T Consensus 234 DGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGkIKvWri~tG~--------ClRrFdrAH 305 (508)
T KOG0275|consen 234 DGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGKIKVWRIETGQ--------CLRRFDRAH 305 (508)
T ss_pred cceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCCcEEEEEEecch--------HHHHhhhhh
Confidence 44667899999999999993 4588899999999999999999999999999999998871 23222 23
Q ss_pred CCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccc
Q 004989 656 RSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 656 ~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~ 714 (720)
...|+||.||.++ +.|.|+|+|.||||--+.+|+++++ |+-+.|++.+..+.+.|-|-
T Consensus 306 tkGvt~l~FSrD~-SqiLS~sfD~tvRiHGlKSGK~LKEfrGHsSyvn~a~ft~dG~~iisaSsDg 370 (508)
T KOG0275|consen 306 TKGVTCLSFSRDN-SQILSASFDQTVRIHGLKSGKCLKEFRGHSSYVNEATFTDDGHHIISASSDG 370 (508)
T ss_pred ccCeeEEEEccCc-chhhcccccceEEEeccccchhHHHhcCccccccceEEcCCCCeEEEecCCc
Confidence 5569999999965 5899999999999999999999987 78899999999999988764
No 464
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.21 E-value=1.5e-11 Score=144.94 Aligned_cols=123 Identities=18% Similarity=0.249 Sum_probs=100.5
Q ss_pred EEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEc-------cCCceEEeecCc
Q 004989 96 FVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMS-------SFNHVSFIESAS 167 (720)
Q Consensus 96 ~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~-------~~~~vkliDfg~ 167 (720)
-++|+|| .-|||.++++ ..+.+++..++.+..|++..|++||..+|||+||||+|+||. .+--++|||||.
T Consensus 769 S~lv~ey~~~Gtlld~~N-~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~ 847 (974)
T KOG1166|consen 769 SVLVSEYSPYGTLLDLIN-TNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGR 847 (974)
T ss_pred ceeeeeccccccHHHhhc-cCCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEEeccc
Confidence 4899999 9999999995 555699999999999999999999999999999999999996 233589999998
Q ss_pred ccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccc
Q 004989 168 CSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKI 247 (720)
Q Consensus 168 a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~ 247 (720)
+.|.-.- . .
T Consensus 848 siDm~lf---------------------------------------p--~------------------------------ 856 (974)
T KOG1166|consen 848 SIDMKLF---------------------------------------P--D------------------------------ 856 (974)
T ss_pred ceeeeEc---------------------------------------C--C------------------------------
Confidence 7442100 0 0
Q ss_pred cccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhcccc
Q 004989 248 LDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFCP 307 (720)
Q Consensus 248 ~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLltp 307 (720)
..+-...++|-.+-.+|+..|.++++.+|.|.|..+++-||.+
T Consensus 857 -----------------~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG 899 (974)
T KOG1166|consen 857 -----------------GTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFG 899 (974)
T ss_pred -----------------CcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHH
Confidence 0000114678889999999999999999999999999999974
No 465
>KOG0302 consensus Ribosome Assembly protein [General function prediction only]
Probab=99.21 E-value=5.6e-11 Score=122.89 Aligned_cols=108 Identities=16% Similarity=0.207 Sum_probs=83.5
Q ss_pred CCCCCCCCCeEEEEECCCCC-EEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCC
Q 004989 601 GDLLNSSNLVCSLSFDRDGE-LFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEG 679 (720)
Q Consensus 601 ~~~~~~~~~V~sv~f~~dg~-~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~ 679 (720)
.-|.+|+.-|-.++|||..+ .|||||.|++|||||++..... ..+..-.|.+.|+-|+||.... +||||+.||
T Consensus 251 ~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~-----~~~~~kAh~sDVNVISWnr~~~-lLasG~DdG 324 (440)
T KOG0302|consen 251 RPFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKK-----AAVSTKAHNSDVNVISWNRREP-LLASGGDDG 324 (440)
T ss_pred ccccccccchhhhccCCccCceEEeeecCceEEEEEecCCCcc-----ceeEeeccCCceeeEEccCCcc-eeeecCCCc
Confidence 34778999999999999775 7999999999999999876221 1222345577899999998655 999999999
Q ss_pred cEEEEECC---CCcEEEE-------EEEEeecCC--ceEEEecCccc
Q 004989 680 VVQVGQVL---HLIYFSA-------LYCIVLNKL--LIIFRYGMFQE 714 (720)
Q Consensus 680 ~v~lWD~~---tg~~~~~-------v~~v~~~~~--~~~~~~~~~~~ 714 (720)
+++|||++ .|+.+.+ |+||.|+|. ..+-++|.=++
T Consensus 325 t~~iwDLR~~~~~~pVA~fk~Hk~pItsieW~p~e~s~iaasg~D~Q 371 (440)
T KOG0302|consen 325 TLSIWDLRQFKSGQPVATFKYHKAPITSIEWHPHEDSVIAASGEDNQ 371 (440)
T ss_pred eEEEEEhhhccCCCcceeEEeccCCeeEEEeccccCceEEeccCCCc
Confidence 99999997 4555655 899999863 44445554333
No 466
>KOG1407 consensus WD40 repeat protein [Function unknown]
Probab=99.21 E-value=3.2e-11 Score=119.37 Aligned_cols=109 Identities=13% Similarity=0.181 Sum_probs=89.2
Q ss_pred CCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCc
Q 004989 601 GDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGV 680 (720)
Q Consensus 601 ~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~ 680 (720)
+++.+|...|.||+|+-||..+|+|+.|++++||++.... - ......-.|++.|-.+||+|.+...+|+++.|++
T Consensus 14 r~~~~~~~~v~Sv~wn~~g~~lasgs~dktv~v~n~e~~r-~----~~~~~~~gh~~svdql~w~~~~~d~~atas~dk~ 88 (313)
T KOG1407|consen 14 RELQGHVQKVHSVAWNCDGTKLASGSFDKTVSVWNLERDR-F----RKELVYRGHTDSVDQLCWDPKHPDLFATASGDKT 88 (313)
T ss_pred HHhhhhhhcceEEEEcccCceeeecccCCceEEEEecchh-h----hhhhcccCCCcchhhheeCCCCCcceEEecCCce
Confidence 5677889999999999999999999999999999976541 0 0111223456789999999999999999999999
Q ss_pred EEEEECCCCcEEEEE------EEEeecCCceEEEecCccc
Q 004989 681 VQVGQVLHLIYFSAL------YCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 681 v~lWD~~tg~~~~~v------~~v~~~~~~~~~~~~~~~~ 714 (720)
|++||+++++|+.++ .=+.|+|.+.++.-|.=|.
T Consensus 89 ir~wd~r~~k~~~~i~~~~eni~i~wsp~g~~~~~~~kdD 128 (313)
T KOG1407|consen 89 IRIWDIRSGKCTARIETKGENINITWSPDGEYIAVGNKDD 128 (313)
T ss_pred EEEEEeccCcEEEEeeccCcceEEEEcCCCCEEEEecCcc
Confidence 999999999999873 2468999998887776543
No 467
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.21 E-value=7.5e-12 Score=128.24 Aligned_cols=207 Identities=18% Similarity=0.154 Sum_probs=139.5
Q ss_pred cccCCCCCceecccceeecCC-CCCcEEEEEec-CCCCHHHHHh---CCCCCCCHHHHHHHHHHHHHHHHHHHHC--Cce
Q 004989 71 LTHGDHLRNQGGLSGVCENEA-AIDPFVHAIEW-GDVSLRQWLD---KPKRSVDVYECLHIFRQIVEIVYAAHSQ--GIV 143 (720)
Q Consensus 71 L~~l~HpnIV~l~~~~~~~~~-~~~~~~lv~E~-~ggsL~~~L~---~~~~~l~~~~~~~i~~QIl~aL~yLHs~--gIv 143 (720)
|-++.|.|||+++..|-.... +...+.++.|| ..|+|.++|+ +.+..+......+|+.||+.||.|||+. -|+
T Consensus 121 llqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~Ppii 200 (458)
T KOG1266|consen 121 LLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPPII 200 (458)
T ss_pred HHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCccc
Confidence 556889999999984432222 34457889999 8999999993 3445588889999999999999999984 699
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
|+++...-|++..+|-+|+- .. .+ |+- .
T Consensus 201 hgnlTc~tifiq~ngLIkig---~~----ap----------------------------------~s~--h--------- 228 (458)
T KOG1266|consen 201 HGNLTCDTIFIQHNGLIKIG---SV----AP----------------------------------DST--H--------- 228 (458)
T ss_pred cCCcchhheeecCCceEEec---cc----Cc----------------------------------ccc--c---------
Confidence 99999999999999988872 11 00 000 0
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
.....+ +. .+ .....+-++|.|||.-.....+.++|||++|....|
T Consensus 229 ----------------------~s~~~~---~~-~E--------k~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAle 274 (458)
T KOG1266|consen 229 ----------------------PSVNST---RE-AE--------KSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALE 274 (458)
T ss_pred ----------------------hhhhhh---hH-hh--------hhccccCCccccCCcCcccccccchhhhhhhHHHHH
Confidence 000000 00 00 001235678999998666667889999999988888
Q ss_pred ccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004989 304 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 304 Llt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
|.. |-.+.... ..-..+. .-.+....+..++++.+||..+|..||+|+++|.||.+-+..
T Consensus 275 mailEiq~tnseS~~-~~ee~ia----~~i~~len~lqr~~i~kcl~~eP~~rp~ar~llfHpllfeVh 338 (458)
T KOG1266|consen 275 MAILEIQSTNSESKV-EVEENIA----NVIIGLENGLQRGSITKCLEGEPNGRPDARLLLFHPLLFEVH 338 (458)
T ss_pred HHHheeccCCCccee-ehhhhhh----hheeeccCccccCcCcccccCCCCCCcchhhhhcCceeeecc
Confidence 875 22221110 1111111 111222334445899999999999999999999999877653
No 468
>KOG0316 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.21 E-value=7e-11 Score=115.33 Aligned_cols=125 Identities=12% Similarity=0.167 Sum_probs=106.4
Q ss_pred hhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecC-CCC
Q 004989 580 LEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS-RSK 658 (720)
Q Consensus 580 ~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~ 658 (720)
.+.-+.+|.-++.||+..++ +|...|+.|+|+-+...+++||.|.++|+||+++... .|++.+.. ...
T Consensus 79 gDk~v~vwDV~TGkv~Rr~r-----gH~aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS~s~------ePiQildea~D~ 147 (307)
T KOG0316|consen 79 GDKAVQVWDVNTGKVDRRFR-----GHLAQVNTVRFNEESSVVASGSFDSSVRLWDCRSRSF------EPIQILDEAKDG 147 (307)
T ss_pred CCceEEEEEcccCeeeeecc-----cccceeeEEEecCcceEEEeccccceeEEEEcccCCC------CccchhhhhcCc
Confidence 34467889999999988776 3589999999999999999999999999999987532 47776654 778
Q ss_pred EEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-----EEEEeecCCceEEEecCccceEEc
Q 004989 659 LSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-----LYCIVLNKLLIIFRYGMFQEVKYL 718 (720)
Q Consensus 659 i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~-----v~~v~~~~~~~~~~~~~~~~~~~~ 718 (720)
|++|..+. +.|++||.||+||.+|++.|+.... |+||.|++.+++..-|++|-...|
T Consensus 148 V~Si~v~~---heIvaGS~DGtvRtydiR~G~l~sDy~g~pit~vs~s~d~nc~La~~l~stlrL 209 (307)
T KOG0316|consen 148 VSSIDVAE---HEIVAGSVDGTVRTYDIRKGTLSSDYFGHPITSVSFSKDGNCSLASSLDSTLRL 209 (307)
T ss_pred eeEEEecc---cEEEeeccCCcEEEEEeecceeehhhcCCcceeEEecCCCCEEEEeeccceeee
Confidence 99999985 4799999999999999999988765 999999999999999998865443
No 469
>KOG0293 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.20 E-value=4.6e-11 Score=124.56 Aligned_cols=105 Identities=15% Similarity=0.157 Sum_probs=88.9
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccce--EEecCCCCEEEEEEecCCCCEEEEEeCCCc
Q 004989 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPV--VEMASRSKLSSICWNSYIKSQIASSNFEGV 680 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~--~~~~~~~~i~~l~w~~~~~~~laS~s~D~~ 680 (720)
|..|++.|.=+.||++|+|||||+.|.+.-||+...- .|..+ +..+|...|+-+.|||++ .+|.+|+.|..
T Consensus 220 l~~htdEVWfl~FS~nGkyLAsaSkD~Taiiw~v~~d------~~~kl~~tlvgh~~~V~yi~wSPDd-ryLlaCg~~e~ 292 (519)
T KOG0293|consen 220 LQDHTDEVWFLQFSHNGKYLASASKDSTAIIWIVVYD------VHFKLKKTLVGHSQPVSYIMWSPDD-RYLLACGFDEV 292 (519)
T ss_pred HhhCCCcEEEEEEcCCCeeEeeccCCceEEEEEEecC------cceeeeeeeecccCceEEEEECCCC-CeEEecCchHh
Confidence 4567999999999999999999999999999996432 22112 234567789999999976 58999999999
Q ss_pred EEEEECCCCcEEEE--------EEEEeecCCceEEEecCccc
Q 004989 681 VQVGQVLHLIYFSA--------LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 681 v~lWD~~tg~~~~~--------v~~v~~~~~~~~~~~~~~~~ 714 (720)
+++|||.||.+... +.|++|.|++--++.||-|-
T Consensus 293 ~~lwDv~tgd~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~dr 334 (519)
T KOG0293|consen 293 LSLWDVDTGDLRHLYPSGLGFSVSSCAWCPDGFRFVTGSPDR 334 (519)
T ss_pred eeeccCCcchhhhhcccCcCCCcceeEEccCCceeEecCCCC
Confidence 99999999988764 78999999999999999874
No 470
>KOG0313 consensus Microtubule binding protein YTM1 (contains WD40 repeats) [Cytoskeleton]
Probab=99.20 E-value=1e-10 Score=121.02 Aligned_cols=112 Identities=20% Similarity=0.290 Sum_probs=93.6
Q ss_pred CCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCccccc-----------------ccccccceEEec-CCCCEEEEEEec
Q 004989 605 NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINE-----------------NRDIHYPVVEMA-SRSKLSSICWNS 666 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~-----------------~~~~~~~~~~~~-~~~~i~~l~w~~ 666 (720)
||...|-||+-++||..|+|||.|.+|+||+..+-... ......|+..+. |+.+|++|.|++
T Consensus 191 GHk~~V~sVsv~~sgtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V~w~d 270 (423)
T KOG0313|consen 191 GHKRSVDSVSVDSSGTRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEGHTEPVSSVVWSD 270 (423)
T ss_pred ccccceeEEEecCCCCeEEeecccceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEecccccceeeEEEcC
Confidence 89999999999999999999999999999994331000 012345777665 488899999998
Q ss_pred CCCCEEEEEeCCCcEEEEECCCCcEEEE------EEEEeecCCceEEEecCccceEEc
Q 004989 667 YIKSQIASSNFEGVVQVGQVLHLIYFSA------LYCIVLNKLLIIFRYGMFQEVKYL 718 (720)
Q Consensus 667 ~~~~~laS~s~D~~v~lWD~~tg~~~~~------v~~v~~~~~~~~~~~~~~~~~~~~ 718 (720)
...+.|+|+|-|||+||+.||+++.+ ++||++++.+..+++|+-|.-..|
T Consensus 271 --~~v~yS~SwDHTIk~WDletg~~~~~~~~~ksl~~i~~~~~~~Ll~~gssdr~irl 326 (423)
T KOG0313|consen 271 --ATVIYSVSWDHTIKVWDLETGGLKSTLTTNKSLNCISYSPLSKLLASGSSDRHIRL 326 (423)
T ss_pred --CCceEeecccceEEEEEeecccceeeeecCcceeEeecccccceeeecCCCCceee
Confidence 45899999999999999999999887 899999999999999998875443
No 471
>KOG0295 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.20 E-value=8.8e-11 Score=121.01 Aligned_cols=128 Identities=9% Similarity=0.062 Sum_probs=102.7
Q ss_pred ccchhhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecC
Q 004989 576 INPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS 655 (720)
Q Consensus 576 ~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 655 (720)
++.|.+...+-|...++--+-++. +|..||..|+-+.||.+||+||.|.++++|=+.+.. |....-.|
T Consensus 209 lS~srD~tik~We~~tg~cv~t~~-----~h~ewvr~v~v~~DGti~As~s~dqtl~vW~~~t~~-------~k~~lR~h 276 (406)
T KOG0295|consen 209 LSCSRDNTIKAWECDTGYCVKTFP-----GHSEWVRMVRVNQDGTIIASCSNDQTLRVWVVATKQ-------CKAELREH 276 (406)
T ss_pred eecccccceeEEecccceeEEecc-----CchHhEEEEEecCCeeEEEecCCCceEEEEEeccch-------hhhhhhcc
Confidence 677777777888887777666665 458899999999999999999999999999887751 11111123
Q ss_pred CCCEEEEEEecCC--------------CCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccc
Q 004989 656 RSKLSSICWNSYI--------------KSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 656 ~~~i~~l~w~~~~--------------~~~laS~s~D~~v~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~ 714 (720)
...|-|++|-|.. +++|+|+|.|+|||+||+.||.|+.+ |..++|+|.|.++.|-+=|+
T Consensus 277 Eh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~tL~ghdnwVr~~af~p~Gkyi~ScaDDk 356 (406)
T KOG0295|consen 277 EHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLFTLVGHDNWVRGVAFSPGGKYILSCADDK 356 (406)
T ss_pred ccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCCeEEEEEecccceeeeeEEcCCCeEEEEEecCC
Confidence 4568888886642 25899999999999999999999998 88999999999999877665
Q ss_pred e
Q 004989 715 V 715 (720)
Q Consensus 715 ~ 715 (720)
-
T Consensus 357 t 357 (406)
T KOG0295|consen 357 T 357 (406)
T ss_pred c
Confidence 3
No 472
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.19 E-value=5.2e-11 Score=138.05 Aligned_cols=232 Identities=17% Similarity=0.188 Sum_probs=156.8
Q ss_pred hcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCC
Q 004989 70 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 148 (720)
Q Consensus 70 ~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLK 148 (720)
++-...||-+++.+. ........+++++| .|++|...|.+.+ ..+..-++.++..++.+++|||+..++|+|++
T Consensus 857 ~~i~p~~P~v~~~~~----s~~~rsP~~L~~~~~~~~~~~Skl~~~~-~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~ 931 (1205)
T KOG0606|consen 857 ILITPRSPAVVRSFP----SFPCRSPLPLVGHYLNGGDLPSKLHNSG-CLSAEPARSPILERVQSLESLHSSLRKHRDLK 931 (1205)
T ss_pred ccccCCCCceecccC----CCCCCCCcchhhHHhccCCchhhhhcCC-CcccccccchhHHHHhhhhccccchhhccccc
Confidence 333345677777666 23334467999999 8999999886655 37788888899999999999999999999999
Q ss_pred CCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhccccccc-ccccCCCCCCccccccc
Q 004989 149 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDL-QLVTAPTNDLSEASCMQ 227 (720)
Q Consensus 149 P~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Df-gla~~~~~~~~~~~~~q 227 (720)
|.|+++..+++.++.+||+....|.-... .+. |..+.....+
T Consensus 932 p~~~l~~~~gh~~l~~~~t~~~vg~~~p~------------------------------~~~sg~~~~~~~~~------- 974 (1205)
T KOG0606|consen 932 PDSLLIAYDGHRPLTDFGTLSKVGLIPPT------------------------------TDLSGPSSSGTPRR------- 974 (1205)
T ss_pred ccchhhcccCCcccCccccccccccccCc------------------------------CCcccccccCcccc-------
Confidence 99999999999999999976543322110 011 0000000000
Q ss_pred CCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhccc-
Q 004989 228 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 306 (720)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt- 306 (720)
+. .......+ ... -.......+||+.|.+||.+.+...+..+|+|++|++++|.++
T Consensus 975 ----~~------~~~~~~~l------------~~~-~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g 1031 (1205)
T KOG0606|consen 975 ----LS------RSERRPQL------------SAD-EARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTG 1031 (1205)
T ss_pred ----cc------cccccccc------------ccc-hhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcC
Confidence 00 00000000 000 0001123589999999999999999999999999999999999
Q ss_pred --cCCCCchHHHHHHHhhcCCCC-ccccccC-chHHHHHHHcCCCCCCCCCChH---HHHcCcccCCC
Q 004989 307 --PFSTGEEKTRTMSSLRHRVLP-PQLLLKF-PKEASFCLWLLHPEPSGRPKMG---ELLQSEFLNEP 367 (720)
Q Consensus 307 --pf~~~~~~~~~~~~l~~~~~p-~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~---eiL~hp~~~~~ 367 (720)
||.... .......+..+..| +.-.... +...+++..+|..+|.+|..+. ++-.|+||+..
T Consensus 1032 ~pp~na~t-pq~~f~ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~~~~e~k~~~~~~~~ 1098 (1205)
T KOG0606|consen 1032 IPPFNAET-PQQIFENILNRDIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAKGAAEVKGHPFFQDV 1098 (1205)
T ss_pred CCCCCCcc-hhhhhhccccCCCCCCCCccccChhhhhhhhhhhccCchhccCcccccccccCCccCCC
Confidence 444433 34555555554433 3322333 3344999999999999998766 88899999987
No 473
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.19 E-value=4.5e-11 Score=120.39 Aligned_cols=98 Identities=16% Similarity=0.227 Sum_probs=80.4
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++..+.|++|+.... ++.+.. ..+++||| .|++|.+++.... . +...++.+|+.+|.++|+.|
T Consensus 45 ~~~~E~~~l~~l~~~~i~~p~~-~~~~~~---~~~lv~e~~~G~~L~~~~~~~~----~-~~~~i~~~i~~~l~~lH~~~ 115 (211)
T PRK14879 45 RTRREARIMSRARKAGVNVPAV-YFVDPE---NFIIVMEYIEGEPLKDLINSNG----M-EELELSREIGRLVGKLHSAG 115 (211)
T ss_pred HHHHHHHHHHHHHHCCCCCCeE-EEEeCC---CCEEEEEEeCCcCHHHHHHhcc----H-HHHHHHHHHHHHHHHHHhCC
Confidence 4457888899999999866555 332322 35899999 8999999985422 2 88899999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccC
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSD 170 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~ 170 (720)
++|+|++|.|||++ ++.++++|||.+..
T Consensus 116 i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 116 IIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred cccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 99999999999998 78999999998843
No 474
>KOG0645 consensus WD40 repeat protein [General function prediction only]
Probab=99.18 E-value=2.5e-10 Score=113.74 Aligned_cols=108 Identities=13% Similarity=0.229 Sum_probs=85.6
Q ss_pred CCCCCCCCeEEEEECCC-CCEEEEeeCCCcEEEeeCCcccccccccccceEEe--cCCCCEEEEEEecCCCCEEEEEeCC
Q 004989 602 DLLNSSNLVCSLSFDRD-GELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM--ASRSKLSSICWNSYIKSQIASSNFE 678 (720)
Q Consensus 602 ~~~~~~~~V~sv~f~~d-g~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~--~~~~~i~~l~w~~~~~~~laS~s~D 678 (720)
.+.+|.+.|.++||+|- |.+|||||.||+||||+.... .. . ...+.+ .|+-.|.+|+|+|+ +++|||||+|
T Consensus 9 ~~~gh~~r~W~~awhp~~g~ilAscg~Dk~vriw~~~~~-~s---~-~ck~vld~~hkrsVRsvAwsp~-g~~La~aSFD 82 (312)
T KOG0645|consen 9 KLSGHKDRVWSVAWHPGKGVILASCGTDKAVRIWSTSSG-DS---W-TCKTVLDDGHKRSVRSVAWSPH-GRYLASASFD 82 (312)
T ss_pred eecCCCCcEEEEEeccCCceEEEeecCCceEEEEecCCC-Cc---E-EEEEeccccchheeeeeeecCC-CcEEEEeecc
Confidence 45678999999999998 999999999999999997642 11 0 111111 34667999999995 5699999999
Q ss_pred CcEEEEECCCC--cEEEE-------EEEEeecCCceEEEecCccce
Q 004989 679 GVVQVGQVLHL--IYFSA-------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 679 ~~v~lWD~~tg--~~~~~-------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
.|+-||-=..+ +|+.+ |-||+||+.+.++++-|=|+-
T Consensus 83 ~t~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG~~LATCSRDKS 128 (312)
T KOG0645|consen 83 ATVVIWKKEDGEFECVATLEGHENEVKCVAWSASGNYLATCSRDKS 128 (312)
T ss_pred ceEEEeecCCCceeEEeeeeccccceeEEEEcCCCCEEEEeeCCCe
Confidence 99999976644 45554 899999999999998887764
No 475
>KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.17 E-value=1.2e-10 Score=115.01 Aligned_cols=118 Identities=10% Similarity=0.154 Sum_probs=91.7
Q ss_pred cceEEeeeec-c--CCCCCCCCCeEEEEECC-CCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEe
Q 004989 590 SKLRVKADLN-Q--GDLLNSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWN 665 (720)
Q Consensus 590 ~~~~~~~~l~-~--~~~~~~~~~V~sv~f~~-dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~ 665 (720)
.++|+++..+ . ..+.||.+.|...+|+| .+.+||++|.|++++|||++... .++....|...|.|+-||
T Consensus 127 ~TiKLW~~~r~~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~g-------k~~~i~ah~~Eil~cdw~ 199 (311)
T KOG0277|consen 127 GTIKLWDPNRPNSVQTFNGHNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSPG-------KFMSIEAHNSEILCCDWS 199 (311)
T ss_pred CceEeecCCCCcceEeecCCccEEEEEecCCCCCCeEEEccCCceEEEEEecCCC-------ceeEEEeccceeEeeccc
Confidence 3556666555 2 35778999999999998 66899999999999999987641 233333456689999999
Q ss_pred cCCCCEEEEEeCCCcEEEEECCCC-cEEEE-------EEEEeecCC-ceEEEecCccc
Q 004989 666 SYIKSQIASSNFEGVVQVGQVLHL-IYFSA-------LYCIVLNKL-LIIFRYGMFQE 714 (720)
Q Consensus 666 ~~~~~~laS~s~D~~v~lWD~~tg-~~~~~-------v~~v~~~~~-~~~~~~~~~~~ 714 (720)
+++.++||||+-|+.||.||++.- +.+.+ |..|.|||- .+++++.|+|=
T Consensus 200 ky~~~vl~Tg~vd~~vr~wDir~~r~pl~eL~gh~~AVRkvk~Sph~~~lLaSasYDm 257 (311)
T KOG0277|consen 200 KYNHNVLATGGVDNLVRGWDIRNLRTPLFELNGHGLAVRKVKFSPHHASLLASASYDM 257 (311)
T ss_pred ccCCcEEEecCCCceEEEEehhhccccceeecCCceEEEEEecCcchhhHhhhccccc
Confidence 999999999999999999999743 33443 788999875 45667777763
No 476
>KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.17 E-value=1.1e-10 Score=129.70 Aligned_cols=100 Identities=6% Similarity=0.066 Sum_probs=85.0
Q ss_pred CCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCCcEEE
Q 004989 605 NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGVVQV 683 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~w~~~~~~~laS~s~D~~v~l 683 (720)
.|.--|+||+.+|+.++|||||.||+.|||++.... -+..+ +|+-.|.||.|+|++ +.|||+|.|+||||
T Consensus 461 aHdKdIN~Vaia~ndkLiAT~SqDktaKiW~le~~~--------l~~vLsGH~RGvw~V~Fs~~d-q~laT~SgD~TvKI 531 (775)
T KOG0319|consen 461 AHDKDINCVAIAPNDKLIATGSQDKTAKIWDLEQLR--------LLGVLSGHTRGVWCVSFSKND-QLLATCSGDKTVKI 531 (775)
T ss_pred hhcccccceEecCCCceEEecccccceeeecccCce--------EEEEeeCCccceEEEEecccc-ceeEeccCCceEEE
Confidence 457889999999999999999999999999987541 22233 446679999999976 59999999999999
Q ss_pred EECCCCcEEEE-------EEEEeecCCceEEEecCcc
Q 004989 684 GQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 684 WD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~ 713 (720)
|.+.+..|+++ |..+.|-..+..+.|+--|
T Consensus 532 W~is~fSClkT~eGH~~aVlra~F~~~~~qliS~~ad 568 (775)
T KOG0319|consen 532 WSISTFSCLKTFEGHTSAVLRASFIRNGKQLISAGAD 568 (775)
T ss_pred EEeccceeeeeecCccceeEeeeeeeCCcEEEeccCC
Confidence 99999999998 7888998888888876554
No 477
>KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.17 E-value=2.6e-11 Score=119.54 Aligned_cols=109 Identities=10% Similarity=0.148 Sum_probs=88.8
Q ss_pred CCCCCCCeEEEEECCCC-CEEEEeeCCCcEEEeeCCcccccccccccceEEecC-CCCEEEEEEecCCCCEEEEEeCCCc
Q 004989 603 LLNSSNLVCSLSFDRDG-ELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS-RSKLSSICWNSYIKSQIASSNFEGV 680 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg-~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~i~~l~w~~~~~~~laS~s~D~~ 680 (720)
+..|+..+.|+.|+... .++||||+|+.||+||++... .|+.++.+ .-.|..|.|||++.++|||+|||.|
T Consensus 186 i~ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~r-------~pl~eL~gh~~AVRkvk~Sph~~~lLaSasYDmT 258 (311)
T KOG0277|consen 186 IEAHNSEILCCDWSKYNHNVLATGGVDNLVRGWDIRNLR-------TPLFELNGHGLAVRKVKFSPHHASLLASASYDMT 258 (311)
T ss_pred EEeccceeEeecccccCCcEEEecCCCceEEEEehhhcc-------ccceeecCCceEEEEEecCcchhhHhhhccccce
Confidence 45678899999999866 479999999999999998762 47777755 4569999999999999999999999
Q ss_pred EEEEECCCCcEEEE--------EEEEeecCC-ceEEEecCccceEEc
Q 004989 681 VQVGQVLHLIYFSA--------LYCIVLNKL-LIIFRYGMFQEVKYL 718 (720)
Q Consensus 681 v~lWD~~tg~~~~~--------v~~v~~~~~-~~~~~~~~~~~~~~~ 718 (720)
+||||...+....+ |..++||.. ...+++-..||..|.
T Consensus 259 ~riw~~~~~ds~~e~~~~HtEFv~g~Dws~~~~~~vAs~gWDe~l~V 305 (311)
T KOG0277|consen 259 VRIWDPERQDSAIETVDHHTEFVCGLDWSLFDPGQVASTGWDELLYV 305 (311)
T ss_pred EEecccccchhhhhhhhccceEEeccccccccCceeeecccccceee
Confidence 99999986654433 667788765 456788888887764
No 478
>KOG0292 consensus Vesicle coat complex COPI, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.17 E-value=5e-11 Score=134.01 Aligned_cols=128 Identities=11% Similarity=0.146 Sum_probs=103.6
Q ss_pred ccchhhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecC
Q 004989 576 INPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS 655 (720)
Q Consensus 576 ~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 655 (720)
|..--++.+++|.|.-- +|- ..|..|.+.|..|+|+|++.+|+|||.|.+||||++.+.. |-.+..+|
T Consensus 25 LtslHsG~IQlWDYRM~----tli-~rFdeHdGpVRgv~FH~~qplFVSGGDDykIkVWnYk~rr-------clftL~GH 92 (1202)
T KOG0292|consen 25 LTSLHSGVIQLWDYRMG----TLI-DRFDEHDGPVRGVDFHPTQPLFVSGGDDYKIKVWNYKTRR-------CLFTLLGH 92 (1202)
T ss_pred EEeecCceeeeehhhhh----hHH-hhhhccCCccceeeecCCCCeEEecCCccEEEEEecccce-------ehhhhccc
Confidence 33344557788888322 221 2466789999999999999999999999999999998751 22234455
Q ss_pred CCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceE
Q 004989 656 RSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 656 ~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
-+-|..+.|.+ -..+|.|+|.|.|||||+-.+++||.. |-|..|+|.--.++|+|+|+-.
T Consensus 93 lDYVRt~~FHh-eyPWIlSASDDQTIrIWNwqsr~~iavltGHnHYVMcAqFhptEDlIVSaSLDQTV 159 (1202)
T KOG0292|consen 93 LDYVRTVFFHH-EYPWILSASDDQTIRIWNWQSRKCIAVLTGHNHYVMCAQFHPTEDLIVSASLDQTV 159 (1202)
T ss_pred cceeEEeeccC-CCceEEEccCCCeEEEEeccCCceEEEEecCceEEEeeccCCccceEEEecccceE
Confidence 66799999987 456999999999999999999999987 7899999999999999999854
No 479
>KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.16 E-value=1.7e-10 Score=122.89 Aligned_cols=121 Identities=17% Similarity=0.215 Sum_probs=101.5
Q ss_pred hhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCC-EEEEeeCCCcEEEeeCCcccccccccccceEEecCCCC
Q 004989 580 LEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGE-LFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSK 658 (720)
Q Consensus 580 ~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~-~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 658 (720)
.+...+||.-++.-|.++| .+|++.|.|.+|+|... +++|||-|++||+||.++.. .++.++.|..+
T Consensus 131 Dd~v~k~~d~s~a~v~~~l-----~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~-------~~v~elnhg~p 198 (487)
T KOG0310|consen 131 DDKVVKYWDLSTAYVQAEL-----SGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRSLT-------SRVVELNHGCP 198 (487)
T ss_pred CCceEEEEEcCCcEEEEEe-----cCCcceeEeeccccCCCeEEEecCCCceEEEEEeccCC-------ceeEEecCCCc
Confidence 3457788888888876555 56699999999999765 89999999999999987652 46788899999
Q ss_pred EEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEE--------EEEEEEeecCCceEEEecCccc
Q 004989 659 LSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYF--------SALYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 659 i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~--------~~v~~v~~~~~~~~~~~~~~~~ 714 (720)
|..|++=| .+++||||+ ...|||||+.+|..+ ++|+|..++..+....+|++|-
T Consensus 199 Ve~vl~lp-sgs~iasAg-Gn~vkVWDl~~G~qll~~~~~H~KtVTcL~l~s~~~rLlS~sLD~ 260 (487)
T KOG0310|consen 199 VESVLALP-SGSLIASAG-GNSVKVWDLTTGGQLLTSMFNHNKTVTCLRLASDSTRLLSGSLDR 260 (487)
T ss_pred eeeEEEcC-CCCEEEEcC-CCeEEEEEecCCceehhhhhcccceEEEEEeecCCceEeeccccc
Confidence 99999998 457999998 579999999976443 2499999999999999999984
No 480
>KOG0264 consensus Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1 [Chromatin structure and dynamics]
Probab=99.16 E-value=1.2e-10 Score=123.11 Aligned_cols=100 Identities=13% Similarity=0.132 Sum_probs=79.1
Q ss_pred hhhhccccceEEeeee----c-cCCCCCCCCCeEEEEECCCCC-EEEEeeCCCcEEEeeCCcccccccccccceEEecCC
Q 004989 583 LCKYLSFSKLRVKADL----N-QGDLLNSSNLVCSLSFDRDGE-LFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASR 656 (720)
Q Consensus 583 l~~~~~~~~~~~~~~l----~-~~~~~~~~~~V~sv~f~~dg~-~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~ 656 (720)
++.....++|.++.+- + ......|++.|+||+|+|-++ +|||||.|++|++||+++... ++.....|.
T Consensus 243 F~sv~dd~~L~iwD~R~~~~~~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~------~lh~~e~H~ 316 (422)
T KOG0264|consen 243 FGSVGDDGKLMIWDTRSNTSKPSHSVKAHSAEVNCVAFNPFNEFILATGSADKTVALWDLRNLNK------PLHTFEGHE 316 (422)
T ss_pred heeecCCCeEEEEEcCCCCCCCcccccccCCceeEEEeCCCCCceEEeccCCCcEEEeechhccc------CceeccCCC
Confidence 3445555666555544 1 345678899999999999776 699999999999999998741 233444567
Q ss_pred CCEEEEEEecCCCCEEEEEeCCCcEEEEECCC
Q 004989 657 SKLSSICWNSYIKSQIASSNFEGVVQVGQVLH 688 (720)
Q Consensus 657 ~~i~~l~w~~~~~~~laS~s~D~~v~lWD~~t 688 (720)
..|.+|.|||+..++|||++.|+.+.|||+..
T Consensus 317 dev~~V~WSPh~etvLASSg~D~rl~vWDls~ 348 (422)
T KOG0264|consen 317 DEVFQVEWSPHNETVLASSGTDRRLNVWDLSR 348 (422)
T ss_pred cceEEEEeCCCCCceeEecccCCcEEEEeccc
Confidence 78999999999999999999999999999963
No 481
>KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics]
Probab=99.16 E-value=1.4e-10 Score=123.04 Aligned_cols=104 Identities=15% Similarity=0.236 Sum_probs=82.2
Q ss_pred CCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCccccc--------c-------------------------cccc
Q 004989 601 GDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINE--------N-------------------------RDIH 647 (720)
Q Consensus 601 ~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~--------~-------------------------~~~~ 647 (720)
..|..|.+.|.+|.|+.+|.||++||+|+++-|||..++... + .+..
T Consensus 270 ~tl~~HkgPI~slKWnk~G~yilS~~vD~ttilwd~~~g~~~q~f~~~s~~~lDVdW~~~~~F~ts~td~~i~V~kv~~~ 349 (524)
T KOG0273|consen 270 STLGQHKGPIFSLKWNKKGTYILSGGVDGTTILWDAHTGTVKQQFEFHSAPALDVDWQSNDEFATSSTDGCIHVCKVGED 349 (524)
T ss_pred hhhhccCCceEEEEEcCCCCEEEeccCCccEEEEeccCceEEEeeeeccCCccceEEecCceEeecCCCceEEEEEecCC
Confidence 345678999999999999999999999999999997442100 0 1234
Q ss_pred cceEEe-cCCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCce
Q 004989 648 YPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLI 705 (720)
Q Consensus 648 ~~~~~~-~~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~-------v~~v~~~~~~~ 705 (720)
.|+..+ .|+++|++|.|+|. +.+|||||+|+|+|||....+.++.. +|.+.|+|.+.
T Consensus 350 ~P~~t~~GH~g~V~alk~n~t-g~LLaS~SdD~TlkiWs~~~~~~~~~l~~Hskei~t~~wsp~g~ 414 (524)
T KOG0273|consen 350 RPVKTFIGHHGEVNALKWNPT-GSLLASCSDDGTLKIWSMGQSNSVHDLQAHSKEIYTIKWSPTGP 414 (524)
T ss_pred CcceeeecccCceEEEEECCC-CceEEEecCCCeeEeeecCCCcchhhhhhhccceeeEeecCCCC
Confidence 577555 45889999999995 56999999999999999876666543 88899988764
No 482
>smart00090 RIO RIO-like kinase.
Probab=99.15 E-value=4.5e-11 Score=122.96 Aligned_cols=103 Identities=13% Similarity=0.048 Sum_probs=78.0
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG- 141 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g- 141 (720)
.++|..++.++.+. ++.+.. ++... ..++|||| .|.+|..++... ..+...++..++.||+.+|.+||++|
T Consensus 97 ~~~E~~~L~~L~~~-~i~~p~-~~~~~----~~~lV~E~~~g~~L~~~~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~g~ 169 (237)
T smart00090 97 AEKEFRNLQRLYEA-GVPVPK-PIAWR----RNVLVMEFIGGDGLPAPRLKD-VEPEEEEEFELYDDILEEMRKLYKEGE 169 (237)
T ss_pred HHHHHHHHHHHHhc-CCCCCe-eeEec----CceEEEEEecCCccccccccc-CCcchHHHHHHHHHHHHHHHHHHhcCC
Confidence 34788888888753 333323 12122 23799999 777887655222 33677778899999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCC
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSD 174 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~ 174 (720)
|+||||||+||+++ ++.++++|||.+...+.+
T Consensus 170 iiH~Dikp~NIli~-~~~i~LiDFg~a~~~~~~ 201 (237)
T smart00090 170 LVHGDLSEYNILVH-DGKVVIIDVSQSVELDHP 201 (237)
T ss_pred EEeCCCChhhEEEE-CCCEEEEEChhhhccCCc
Confidence 99999999999998 889999999999765554
No 483
>KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification]
Probab=99.15 E-value=6.4e-11 Score=123.52 Aligned_cols=104 Identities=8% Similarity=0.016 Sum_probs=79.8
Q ss_pred hhhhhhccccceEEeeeec---cCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCC
Q 004989 581 EGLCKYLSFSKLRVKADLN---QGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRS 657 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~---~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 657 (720)
+.++++...++++++.... ...|.||.--|.||+|+|.--+|||||.|..||+||.+++. |-.....|+.
T Consensus 193 skF~t~SdDg~ikiWdf~~~kee~vL~GHgwdVksvdWHP~kgLiasgskDnlVKlWDprSg~-------cl~tlh~HKn 265 (464)
T KOG0284|consen 193 SKFLTCSDDGTIKIWDFRMPKEERVLRGHGWDVKSVDWHPTKGLIASGSKDNLVKLWDPRSGS-------CLATLHGHKN 265 (464)
T ss_pred ceeEEecCCCeEEEEeccCCchhheeccCCCCcceeccCCccceeEEccCCceeEeecCCCcc-------hhhhhhhccc
Confidence 4467788888999999887 36789999999999999999999999999999999998862 1112223456
Q ss_pred CEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEE
Q 004989 658 KLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYF 692 (720)
Q Consensus 658 ~i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~ 692 (720)
.|..+.|+|++ ++|+|+|.|.+++|.|+++-+.+
T Consensus 266 tVl~~~f~~n~-N~Llt~skD~~~kv~DiR~mkEl 299 (464)
T KOG0284|consen 266 TVLAVKFNPNG-NWLLTGSKDQSCKVFDIRTMKEL 299 (464)
T ss_pred eEEEEEEcCCC-CeeEEccCCceEEEEehhHhHHH
Confidence 67777777754 77777777777777777744433
No 484
>KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.15 E-value=2.6e-10 Score=121.58 Aligned_cols=106 Identities=11% Similarity=0.111 Sum_probs=87.4
Q ss_pred CCCCCCCeEEEEECCCC-CEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCEEEEEEecCCCCEEEEEeCCCc
Q 004989 603 LLNSSNLVCSLSFDRDG-ELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEGV 680 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg-~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~l~w~~~~~~~laS~s~D~~ 680 (720)
+..|+..|..+.|+|++ ++|++||.|+.+++||+++. +-..++. |++-|.|.+|+|-..++++||||||+
T Consensus 106 ~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a--------~v~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~ 177 (487)
T KOG0310|consen 106 LYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTA--------YVQAELSGHTDYVRCGDISPANDHIVVTGSYDGK 177 (487)
T ss_pred HhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCc--------EEEEEecCCcceeEeeccccCCCeEEEecCCCce
Confidence 55679999999999866 57999999999999999876 2233443 47779999999988889999999999
Q ss_pred EEEEECCCC-cEEEE------EEEEeecCCceEEEecCccceE
Q 004989 681 VQVGQVLHL-IYFSA------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 681 v~lWD~~tg-~~~~~------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
||+||.++- ..+.+ |.+|-|=|.+..|++..=-+||
T Consensus 178 vrl~DtR~~~~~v~elnhg~pVe~vl~lpsgs~iasAgGn~vk 220 (487)
T KOG0310|consen 178 VRLWDTRSLTSRVVELNHGCPVESVLALPSGSLIASAGGNSVK 220 (487)
T ss_pred EEEEEeccCCceeEEecCCCceeeEEEcCCCCEEEEcCCCeEE
Confidence 999999877 56665 7888998888888876655555
No 485
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.14 E-value=7.5e-11 Score=135.92 Aligned_cols=94 Identities=18% Similarity=0.225 Sum_probs=79.1
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
|..+|..++..+.|++|+..+. +..... ..+++||| .|++|.+++. ....++.||+.+|.+||+.|
T Consensus 382 ~~~~E~~~l~~l~~~~i~~p~~-~~~~~~---~~~lv~E~~~g~~L~~~l~---------~~~~~~~~i~~~L~~lH~~g 448 (535)
T PRK09605 382 RTRAEARLLSEARRAGVPTPVI-YDVDPE---EKTIVMEYIGGKDLKDVLE---------GNPELVRKVGEIVAKLHKAG 448 (535)
T ss_pred HHHHHHHHHHhhcccCCCeeEE-EEEeCC---CCEEEEEecCCCcHHHHHH---------HHHHHHHHHHHHHHHHHhCC
Confidence 4458888999999999987655 232322 35899999 9999999884 45789999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccC
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSD 170 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~ 170 (720)
|+||||||+|||+ .++.++++|||+++.
T Consensus 449 iiHrDlkp~NILl-~~~~~~liDFGla~~ 476 (535)
T PRK09605 449 IVHGDLTTSNFIV-RDDRLYLIDFGLGKY 476 (535)
T ss_pred CccCCCChHHEEE-ECCcEEEEeCccccc
Confidence 9999999999999 678999999999854
No 486
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.13 E-value=4.8e-10 Score=135.39 Aligned_cols=105 Identities=9% Similarity=0.080 Sum_probs=85.8
Q ss_pred CCCCCCCeEEEEECC-CCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcE
Q 004989 603 LLNSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~-dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~v 681 (720)
+.+|...|.+|+|+| +|.+|||||.|++|+|||+.+. .++..+.++..|.+++|++..+.+||+|+.||+|
T Consensus 571 ~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~--------~~~~~~~~~~~v~~v~~~~~~g~~latgs~dg~I 642 (793)
T PLN00181 571 MKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQG--------VSIGTIKTKANICCVQFPSESGRSLAFGSADHKV 642 (793)
T ss_pred ecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCC--------cEEEEEecCCCeEEEEEeCCCCCEEEEEeCCCeE
Confidence 456789999999996 8899999999999999998765 2344444566799999987778899999999999
Q ss_pred EEEECCCCc-EEEE-------EEEEeecCCceEEEecCccceE
Q 004989 682 QVGQVLHLI-YFSA-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 682 ~lWD~~tg~-~~~~-------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
++||+++++ .+.+ |+++.|. .+..+++++.|...
T Consensus 643 ~iwD~~~~~~~~~~~~~h~~~V~~v~f~-~~~~lvs~s~D~~i 684 (793)
T PLN00181 643 YYYDLRNPKLPLCTMIGHSKTVSYVRFV-DSSTLVSSSTDNTL 684 (793)
T ss_pred EEEECCCCCccceEecCCCCCEEEEEEe-CCCEEEEEECCCEE
Confidence 999998765 2332 8899997 56678888888643
No 487
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only]
Probab=99.12 E-value=3.5e-10 Score=111.41 Aligned_cols=85 Identities=7% Similarity=0.100 Sum_probs=70.9
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEE
Q 004989 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQ 682 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~v~ 682 (720)
+..|...+..|.||||++||||+|.|++++||+....+. ...+.-.|..++..++||.+ +.+|++|+.|+++|
T Consensus 211 ~~ah~~~il~C~lSPd~k~lat~ssdktv~iwn~~~~~k------le~~l~gh~rWvWdc~FS~d-g~YlvTassd~~~r 283 (311)
T KOG0315|consen 211 FQAHNGHILRCLLSPDVKYLATCSSDKTVKIWNTDDFFK------LELVLTGHQRWVWDCAFSAD-GEYLVTASSDHTAR 283 (311)
T ss_pred eecccceEEEEEECCCCcEEEeecCCceEEEEecCCcee------eEEEeecCCceEEeeeeccC-ccEEEecCCCCcee
Confidence 445588899999999999999999999999999876521 12333345678999999985 56999999999999
Q ss_pred EEECCCCcEEEE
Q 004989 683 VGQVLHLIYFSA 694 (720)
Q Consensus 683 lWD~~tg~~~~~ 694 (720)
+||+..|+.++.
T Consensus 284 lW~~~~~k~v~q 295 (311)
T KOG0315|consen 284 LWDLSAGKEVRQ 295 (311)
T ss_pred ecccccCceeee
Confidence 999999998876
No 488
>KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.12 E-value=2.5e-10 Score=126.81 Aligned_cols=130 Identities=10% Similarity=0.149 Sum_probs=96.7
Q ss_pred hhhhccccceEEeeeec---cCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccc-------cc-------cc
Q 004989 583 LCKYLSFSKLRVKADLN---QGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIIN-------EN-------RD 645 (720)
Q Consensus 583 l~~~~~~~~~~~~~~l~---~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~-------~~-------~~ 645 (720)
+.+=....|.|++.+.. -..+..|++.|..+.|+.+|..+.++|.||+||.||+..-.+ .+ .|
T Consensus 365 iaTG~eDgKVKvWn~~SgfC~vTFteHts~Vt~v~f~~~g~~llssSLDGtVRAwDlkRYrNfRTft~P~p~QfscvavD 444 (893)
T KOG0291|consen 365 IATGAEDGKVKVWNTQSGFCFVTFTEHTSGVTAVQFTARGNVLLSSSLDGTVRAWDLKRYRNFRTFTSPEPIQFSCVAVD 444 (893)
T ss_pred EEeccCCCcEEEEeccCceEEEEeccCCCceEEEEEEecCCEEEEeecCCeEEeeeecccceeeeecCCCceeeeEEEEc
Confidence 44455668888888887 257888999999999999999999999999999999754100 00 00
Q ss_pred -----------cccce-----------EEe-cCCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEE-------EE
Q 004989 646 -----------IHYPV-----------VEM-ASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFS-------AL 695 (720)
Q Consensus 646 -----------~~~~~-----------~~~-~~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~-------~v 695 (720)
-++.+ -.+ +|.++|++|+|+|. ++.|||+|+|+|||+||+-...... .+
T Consensus 445 ~sGelV~AG~~d~F~IfvWS~qTGqllDiLsGHEgPVs~l~f~~~-~~~LaS~SWDkTVRiW~if~s~~~vEtl~i~sdv 523 (893)
T KOG0291|consen 445 PSGELVCAGAQDSFEIFVWSVQTGQLLDILSGHEGPVSGLSFSPD-GSLLASGSWDKTVRIWDIFSSSGTVETLEIRSDV 523 (893)
T ss_pred CCCCEEEeeccceEEEEEEEeecCeeeehhcCCCCcceeeEEccc-cCeEEeccccceEEEEEeeccCceeeeEeeccce
Confidence 01111 112 45888999999995 6799999999999999996442222 28
Q ss_pred EEEeecCCceEEEecCcc
Q 004989 696 YCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 696 ~~v~~~~~~~~~~~~~~~ 713 (720)
..|+|.|.+.-+.-...|
T Consensus 524 l~vsfrPdG~elaVaTld 541 (893)
T KOG0291|consen 524 LAVSFRPDGKELAVATLD 541 (893)
T ss_pred eEEEEcCCCCeEEEEEec
Confidence 999999998877766655
No 489
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.11 E-value=1.2e-10 Score=116.23 Aligned_cols=95 Identities=14% Similarity=0.181 Sum_probs=74.6
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
|..+|..++..+.|+++..... ++.... ..+++||| .|++|.+++..... .++.||+.+|.+||+.|
T Consensus 43 ~~~~E~~~l~~l~~~~i~~p~~-~~~~~~---~~~lv~e~~~g~~l~~~~~~~~~--------~~~~~i~~~l~~lH~~g 110 (199)
T TIGR03724 43 RTRNEARLLSRARKAGVNTPVV-YDVDPD---NKTIVMEYIEGKPLKDVIEEGND--------ELLREIGRLVGKLHKAG 110 (199)
T ss_pred HHHHHHHHHHHHHHCCCCCCEE-EEEECC---CCEEEEEEECCccHHHHHhhcHH--------HHHHHHHHHHHHHHHCC
Confidence 4447888888888887543332 122222 35899999 89999998843221 78999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccC
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSD 170 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~ 170 (720)
++|+|++|.||+++ ++.++++|||.+..
T Consensus 111 i~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 111 IVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred eecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 99999999999998 89999999998743
No 490
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only]
Probab=99.10 E-value=3.9e-10 Score=111.07 Aligned_cols=98 Identities=9% Similarity=0.140 Sum_probs=81.2
Q ss_pred CCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcE
Q 004989 602 DLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 602 ~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~v 681 (720)
.+.+|+.-|.+|.|.-||+...|||.||++||||++.. .....+.+.+.|++|+.+|+.. .|.||+.+|-|
T Consensus 78 t~e~h~kNVtaVgF~~dgrWMyTgseDgt~kIWdlR~~--------~~qR~~~~~spVn~vvlhpnQt-eLis~dqsg~i 148 (311)
T KOG0315|consen 78 TFEGHTKNVTAVGFQCDGRWMYTGSEDGTVKIWDLRSL--------SCQRNYQHNSPVNTVVLHPNQT-ELISGDQSGNI 148 (311)
T ss_pred EEeccCCceEEEEEeecCeEEEecCCCceEEEEeccCc--------ccchhccCCCCcceEEecCCcc-eEEeecCCCcE
Confidence 45778889999999999999999999999999999875 1234556678999999999654 89999999999
Q ss_pred EEEECCCCcEEEE--------EEEEeecCCceEEE
Q 004989 682 QVGQVLHLIYFSA--------LYCIVLNKLLIIFR 708 (720)
Q Consensus 682 ~lWD~~tg~~~~~--------v~~v~~~~~~~~~~ 708 (720)
+|||+.+..|..+ |.+++..+.+++..
T Consensus 149 rvWDl~~~~c~~~liPe~~~~i~sl~v~~dgsml~ 183 (311)
T KOG0315|consen 149 RVWDLGENSCTHELIPEDDTSIQSLTVMPDGSMLA 183 (311)
T ss_pred EEEEccCCccccccCCCCCcceeeEEEcCCCcEEE
Confidence 9999998876654 67777766666554
No 491
>KOG0278 consensus Serine/threonine kinase receptor-associated protein [Lipid transport and metabolism]
Probab=99.10 E-value=9.2e-11 Score=115.35 Aligned_cols=95 Identities=16% Similarity=0.220 Sum_probs=77.6
Q ss_pred CCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecC-CCCEEEEEEecCCCCEEEEEeCCCcEEE
Q 004989 605 NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS-RSKLSSICWNSYIKSQIASSNFEGVVQV 683 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~i~~l~w~~~~~~~laS~s~D~~v~l 683 (720)
.|.+||.+|+|+.|.++|+|||.+|-+||||++... .|..++.+ .+.|..+-|-.-+ +.|.|+++|++||+
T Consensus 98 ~hkhivk~~af~~ds~~lltgg~ekllrvfdln~p~-------App~E~~ghtg~Ir~v~wc~eD-~~iLSSadd~tVRL 169 (334)
T KOG0278|consen 98 EHKHIVKAVAFSQDSNYLLTGGQEKLLRVFDLNRPK-------APPKEISGHTGGIRTVLWCHED-KCILSSADDKTVRL 169 (334)
T ss_pred hhhheeeeEEecccchhhhccchHHHhhhhhccCCC-------CCchhhcCCCCcceeEEEeccC-ceEEeeccCCceEE
Confidence 458999999999999999999999999999987763 34445544 7789999998644 57888899999999
Q ss_pred EECCCCcEEEE------EEEEeecCCceEE
Q 004989 684 GQVLHLIYFSA------LYCIVLNKLLIIF 707 (720)
Q Consensus 684 WD~~tg~~~~~------v~~v~~~~~~~~~ 707 (720)
||.+||+.+++ |.+.-.++.+-++
T Consensus 170 WD~rTgt~v~sL~~~s~VtSlEvs~dG~il 199 (334)
T KOG0278|consen 170 WDHRTGTEVQSLEFNSPVTSLEVSQDGRIL 199 (334)
T ss_pred EEeccCcEEEEEecCCCCcceeeccCCCEE
Confidence 99999999987 5666666655443
No 492
>KOG0973 consensus Histone transcription regulator HIRA, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.09 E-value=3.5e-10 Score=130.78 Aligned_cols=111 Identities=14% Similarity=0.177 Sum_probs=89.4
Q ss_pred CCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcc-----ccc-----ccccccceE-EecCCCCEEEEEEecCCCCEE
Q 004989 604 LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAI-----INE-----NRDIHYPVV-EMASRSKLSSICWNSYIKSQI 672 (720)
Q Consensus 604 ~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~-----~~~-----~~~~~~~~~-~~~~~~~i~~l~w~~~~~~~l 672 (720)
..|.+-|+||.|+|||+|||+||.|+-|.||+.... .+. .++-...+. ...|.+.|..|+|+|+ ..+|
T Consensus 66 ~~h~~sv~CVR~S~dG~~lAsGSDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~-~~~l 144 (942)
T KOG0973|consen 66 DDHDGSVNCVRFSPDGSYLASGSDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPD-DSLL 144 (942)
T ss_pred ccccCceeEEEECCCCCeEeeccCcceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCC-ccEE
Confidence 345899999999999999999999999999998731 111 011111222 3356788999999995 5699
Q ss_pred EEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccce
Q 004989 673 ASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 673 aS~s~D~~v~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
||+|.|++|-|||..|.+++.. |=.|.|.|.+.++++-+.|.-
T Consensus 145 vS~s~DnsViiwn~~tF~~~~vl~~H~s~VKGvs~DP~Gky~ASqsdDrt 194 (942)
T KOG0973|consen 145 VSVSLDNSVIIWNAKTFELLKVLRGHQSLVKGVSWDPIGKYFASQSDDRT 194 (942)
T ss_pred EEecccceEEEEccccceeeeeeecccccccceEECCccCeeeeecCCce
Confidence 9999999999999999988776 678999999999999999863
No 493
>KOG1407 consensus WD40 repeat protein [Function unknown]
Probab=99.09 E-value=4.6e-10 Score=111.28 Aligned_cols=112 Identities=13% Similarity=0.256 Sum_probs=91.7
Q ss_pred hhhccccceEEeeeec-cCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecC-CCCEEE
Q 004989 584 CKYLSFSKLRVKADLN-QGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS-RSKLSS 661 (720)
Q Consensus 584 ~~~~~~~~~~~~~~l~-~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~i~~ 661 (720)
.....|-.||++.+++ | ..--.||+|+|+|+|||+||.|--+-+||+...+ ++..+.- .-+|..
T Consensus 171 v~ILsypsLkpv~si~AH------~snCicI~f~p~GryfA~GsADAlvSLWD~~ELi--------C~R~isRldwpVRT 236 (313)
T KOG1407|consen 171 VEILSYPSLKPVQSIKAH------PSNCICIEFDPDGRYFATGSADALVSLWDVDELI--------CERCISRLDWPVRT 236 (313)
T ss_pred EEEEeccccccccccccC------CcceEEEEECCCCceEeeccccceeeccChhHhh--------hheeeccccCceEE
Confidence 4556778899999987 5 6667789999999999999999999999987652 2222222 446999
Q ss_pred EEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE------EEEEeecCCceEEEec
Q 004989 662 ICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA------LYCIVLNKLLIIFRYG 710 (720)
Q Consensus 662 l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~------v~~v~~~~~~~~~~~~ 710 (720)
|+||- ++.+|||||.|-.|-|=+|.||..+-+ .++|+|+|.-.+++|.
T Consensus 237 lSFS~-dg~~lASaSEDh~IDIA~vetGd~~~eI~~~~~t~tVAWHPk~~LLAyA 290 (313)
T KOG1407|consen 237 LSFSH-DGRMLASASEDHFIDIAEVETGDRVWEIPCEGPTFTVAWHPKRPLLAYA 290 (313)
T ss_pred EEecc-CcceeeccCccceEEeEecccCCeEEEeeccCCceeEEecCCCceeeEE
Confidence 99996 567999999999999999999988877 5889999988887764
No 494
>KOG0640 consensus mRNA cleavage stimulating factor complex; subunit 1 [RNA processing and modification]
Probab=99.09 E-value=3e-10 Score=114.73 Aligned_cols=111 Identities=10% Similarity=0.116 Sum_probs=92.5
Q ss_pred CCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcE
Q 004989 602 DLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 602 ~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~v 681 (720)
.|..|...|++++|+|...+|++|+.|++||+||+..... ......+.....|.|++|.| .+.+|+.|-.--++
T Consensus 167 TlYDH~devn~l~FHPre~ILiS~srD~tvKlFDfsK~sa-----KrA~K~~qd~~~vrsiSfHP-sGefllvgTdHp~~ 240 (430)
T KOG0640|consen 167 TLYDHVDEVNDLDFHPRETILISGSRDNTVKLFDFSKTSA-----KRAFKVFQDTEPVRSISFHP-SGEFLLVGTDHPTL 240 (430)
T ss_pred ehhhccCcccceeecchhheEEeccCCCeEEEEecccHHH-----HHHHHHhhccceeeeEeecC-CCceEEEecCCCce
Confidence 4566799999999999999999999999999999976411 11222233356799999999 66799988888999
Q ss_pred EEEECCCCcEEEE----------EEEEeecCCceEEEecCccceEEc
Q 004989 682 QVGQVLHLIYFSA----------LYCIVLNKLLIIFRYGMFQEVKYL 718 (720)
Q Consensus 682 ~lWD~~tg~~~~~----------v~~v~~~~~~~~~~~~~~~~~~~~ 718 (720)
+|+||+|-||... |+||.||+.++++++||.|-...|
T Consensus 241 rlYdv~T~QcfvsanPd~qht~ai~~V~Ys~t~~lYvTaSkDG~Ikl 287 (430)
T KOG0640|consen 241 RLYDVNTYQCFVSANPDDQHTGAITQVRYSSTGSLYVTASKDGAIKL 287 (430)
T ss_pred eEEeccceeEeeecCcccccccceeEEEecCCccEEEEeccCCcEEe
Confidence 9999999999875 999999999999999999876543
No 495
>KOG0264 consensus Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1 [Chromatin structure and dynamics]
Probab=99.08 E-value=3.2e-10 Score=120.02 Aligned_cols=107 Identities=10% Similarity=0.189 Sum_probs=83.1
Q ss_pred CCCCCCCCCeEEEEECCCC-CEEEEeeCCCcEEEeeCCcccccccccccce-EEecCCCCEEEEEEecCCCCEEEEEeCC
Q 004989 601 GDLLNSSNLVCSLSFDRDG-ELFAAAGVNKKIKVFECDAIINENRDIHYPV-VEMASRSKLSSICWNSYIKSQIASSNFE 678 (720)
Q Consensus 601 ~~~~~~~~~V~sv~f~~dg-~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~-~~~~~~~~i~~l~w~~~~~~~laS~s~D 678 (720)
..+.+|...|..|+|++-. .+|+++|.|+++.|||.++. .. .|. ..-.|...|.||.|||++..+|||||.|
T Consensus 221 ~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~-~~-----~~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~D 294 (422)
T KOG0264|consen 221 TIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSN-TS-----KPSHSVKAHSAEVNCVAFNPFNEFILATGSAD 294 (422)
T ss_pred EEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCC-CC-----CCcccccccCCceeEEEeCCCCCceEEeccCC
Confidence 3466789999999999855 58999999999999999862 11 122 2234578899999999999999999999
Q ss_pred CcEEEEECCCC-cEEEE-------EEEEeecCCc-eEEEecCcc
Q 004989 679 GVVQVGQVLHL-IYFSA-------LYCIVLNKLL-IIFRYGMFQ 713 (720)
Q Consensus 679 ~~v~lWD~~tg-~~~~~-------v~~v~~~~~~-~~~~~~~~~ 713 (720)
+||+|||++.- +++.+ |++|-|+|-. .++++..+|
T Consensus 295 ~tV~LwDlRnL~~~lh~~e~H~dev~~V~WSPh~etvLASSg~D 338 (422)
T KOG0264|consen 295 KTVALWDLRNLNKPLHTFEGHEDEVFQVEWSPHNETVLASSGTD 338 (422)
T ss_pred CcEEEeechhcccCceeccCCCcceEEEEeCCCCCceeEecccC
Confidence 99999999743 34444 9999999865 344554444
No 496
>KOG0772 consensus Uncharacterized conserved protein, contains WD40 repeat [Function unknown]
Probab=99.08 E-value=1.9e-10 Score=122.97 Aligned_cols=109 Identities=17% Similarity=0.382 Sum_probs=81.2
Q ss_pred CCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCccccc--------ccc------cccce-----------------
Q 004989 602 DLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINE--------NRD------IHYPV----------------- 650 (720)
Q Consensus 602 ~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~--------~~~------~~~~~----------------- 650 (720)
.|.||+-+|++++++|.|..|+|||.|.+|+.|||.-.... +.+ +.|++
T Consensus 162 ~l~hgtk~Vsal~~Dp~GaR~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~Tg~~iLvvsg~aqakl~ 241 (641)
T KOG0772|consen 162 QLKHGTKIVSALAVDPSGARFVSGSLDYTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSVTGDQILVVSGSAQAKLL 241 (641)
T ss_pred eccCCceEEEEeeecCCCceeeeccccceEEEEecccccccchhhhccCcccccccceeeecCCCCeEEEEecCcceeEE
Confidence 45678999999999999999999999999999998641000 000 00111
Q ss_pred -------E----------Ee----cCCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcE----EEE---------EE
Q 004989 651 -------V----------EM----ASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIY----FSA---------LY 696 (720)
Q Consensus 651 -------~----------~~----~~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~----~~~---------v~ 696 (720)
. .| +|...|+|.||+|..+..+.|+++|||+|||||..-+. |.+ ++
T Consensus 242 DRdG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv~~t 321 (641)
T KOG0772|consen 242 DRDGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGGKRVPVT 321 (641)
T ss_pred ccCCceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEEeeccCCCcccCce
Confidence 0 11 23445799999999999999999999999999975433 232 78
Q ss_pred EEeecCCceEEEec
Q 004989 697 CIVLNKLLIIFRYG 710 (720)
Q Consensus 697 ~v~~~~~~~~~~~~ 710 (720)
+++||+.+..|+.|
T Consensus 322 sC~~nrdg~~iAag 335 (641)
T KOG0772|consen 322 SCAWNRDGKLIAAG 335 (641)
T ss_pred eeecCCCcchhhhc
Confidence 99999999887644
No 497
>KOG1273 consensus WD40 repeat protein [General function prediction only]
Probab=99.07 E-value=4.5e-10 Score=113.84 Aligned_cols=84 Identities=13% Similarity=0.249 Sum_probs=69.5
Q ss_pred eEEEEECCCCCEEEEeeCCCcEEEeeCCccc-ccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCC
Q 004989 610 VCSLSFDRDGELFAAAGVNKKIKVFECDAII-NENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLH 688 (720)
Q Consensus 610 V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~~t 688 (720)
-.||.|||-|.++|.|..||.|-|||+.+.. ...... |-..|+|||||+++ ..|.|+|.|..|++||+..
T Consensus 26 a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~iar~lsa--------H~~pi~sl~WS~dg-r~LltsS~D~si~lwDl~~ 96 (405)
T KOG1273|consen 26 AECCQFSRWGDYLAVGCANGRVVIYDFDTFRIARMLSA--------HVRPITSLCWSRDG-RKLLTSSRDWSIKLWDLLK 96 (405)
T ss_pred cceEEeccCcceeeeeccCCcEEEEEccccchhhhhhc--------cccceeEEEecCCC-CEeeeecCCceeEEEeccC
Confidence 6899999999999999999999999998862 111122 34579999999965 5899999999999999999
Q ss_pred CcEEEE------EEEEeecC
Q 004989 689 LIYFSA------LYCIVLNK 702 (720)
Q Consensus 689 g~~~~~------v~~v~~~~ 702 (720)
|.+++. ||.+-|.|
T Consensus 97 gs~l~rirf~spv~~~q~hp 116 (405)
T KOG1273|consen 97 GSPLKRIRFDSPVWGAQWHP 116 (405)
T ss_pred CCceeEEEccCccceeeecc
Confidence 999887 56666654
No 498
>KOG0305 consensus Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=99.06 E-value=5.9e-10 Score=122.76 Aligned_cols=94 Identities=13% Similarity=0.269 Sum_probs=82.0
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccce-EEecCCCCEEEEEEecCCCCEEEEEe--CCC
Q 004989 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPV-VEMASRSKLSSICWNSYIKSQIASSN--FEG 679 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~-~~~~~~~~i~~l~w~~~~~~~laS~s--~D~ 679 (720)
+.+|...||.++|++||.+||+||.|.++.|||.... .|+ ....|...|..++|+|...++||||+ .|+
T Consensus 297 ~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~~~~--------~p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~ 368 (484)
T KOG0305|consen 297 LQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDGLSP--------EPKFTFTEHTAAVKALAWCPWQSGLLATGGGSADR 368 (484)
T ss_pred hhcccceeeeeEECCCCCeeccCCCccceEeccCCCc--------cccEEEeccceeeeEeeeCCCccCceEEcCCCccc
Confidence 6789999999999999999999999999999998433 233 34466888999999999999999987 699
Q ss_pred cEEEEECCCCcEEEE------EEEEeecCCc
Q 004989 680 VVQVGQVLHLIYFSA------LYCIVLNKLL 704 (720)
Q Consensus 680 ~v~lWD~~tg~~~~~------v~~v~~~~~~ 704 (720)
+|++||+.+|+.+.. |.++.|++..
T Consensus 369 ~i~fwn~~~g~~i~~vdtgsQVcsL~Wsk~~ 399 (484)
T KOG0305|consen 369 CIKFWNTNTGARIDSVDTGSQVCSLIWSKKY 399 (484)
T ss_pred EEEEEEcCCCcEecccccCCceeeEEEcCCC
Confidence 999999999999987 7788887766
No 499
>KOG0643 consensus Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1) [Translation, ribosomal structure and biogenesis; Signal transduction mechanisms]
Probab=99.05 E-value=1.4e-09 Score=108.19 Aligned_cols=134 Identities=15% Similarity=0.157 Sum_probs=109.5
Q ss_pred hhhhhhccccceEEeeeec---cCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccc--------------
Q 004989 581 EGLCKYLSFSKLRVKADLN---QGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINEN-------------- 643 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~---~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~-------------- 643 (720)
+.|-.+...++..|+-.+. -|.+.||++.|.||+.+.+.+++.||+.|.++||||+.++....
T Consensus 23 DLlFscaKD~~~~vw~s~nGerlGty~GHtGavW~~Did~~s~~liTGSAD~t~kLWDv~tGk~la~~k~~~~Vk~~~F~ 102 (327)
T KOG0643|consen 23 DLLFSCAKDSTPTVWYSLNGERLGTYDGHTGAVWCCDIDWDSKHLITGSADQTAKLWDVETGKQLATWKTNSPVKRVDFS 102 (327)
T ss_pred cEEEEecCCCCceEEEecCCceeeeecCCCceEEEEEecCCcceeeeccccceeEEEEcCCCcEEEEeecCCeeEEEeec
Confidence 3466788889999999987 38999999999999999999999999999999999987631100
Q ss_pred -------------------------------cccccceEEecC-CCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcE
Q 004989 644 -------------------------------RDIHYPVVEMAS-RSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIY 691 (720)
Q Consensus 644 -------------------------------~~~~~~~~~~~~-~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~ 691 (720)
.+...|+.-+.+ .++|+..-|+|-+ ..|++|..||.|..||+++|+.
T Consensus 103 ~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~Wg~l~-~~ii~Ghe~G~is~~da~~g~~ 181 (327)
T KOG0643|consen 103 FGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALWGPLG-ETIIAGHEDGSISIYDARTGKE 181 (327)
T ss_pred cCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceeeeeecccC-CEEEEecCCCcEEEEEcccCce
Confidence 011234443433 6789999999954 5999999999999999999976
Q ss_pred EEE--------EEEEeecCCceEEEecCccce
Q 004989 692 FSA--------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 692 ~~~--------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
+.. ++.+-|+++..++.+||=|.-
T Consensus 182 ~v~s~~~h~~~Ind~q~s~d~T~FiT~s~Dtt 213 (327)
T KOG0643|consen 182 LVDSDEEHSSKINDLQFSRDRTYFITGSKDTT 213 (327)
T ss_pred eeechhhhccccccccccCCcceEEecccCcc
Confidence 654 889999999999999998754
No 500
>KOG0276 consensus Vesicle coat complex COPI, beta' subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.05 E-value=1.1e-09 Score=119.54 Aligned_cols=118 Identities=9% Similarity=0.048 Sum_probs=95.5
Q ss_pred hhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEE
Q 004989 584 CKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSI 662 (720)
Q Consensus 584 ~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l 662 (720)
.+.-.|++++-+.+.. .|++.|.||+-+|.--++.|+|.|.+||+||+... + ...+.+ +|..-|.+|
T Consensus 79 IrVfnynt~ekV~~Fe-----AH~DyIR~iavHPt~P~vLtsSDDm~iKlW~we~~-w------a~~qtfeGH~HyVMqv 146 (794)
T KOG0276|consen 79 IRVFNYNTGEKVKTFE-----AHSDYIRSIAVHPTLPYVLTSSDDMTIKLWDWENE-W------ACEQTFEGHEHYVMQV 146 (794)
T ss_pred EEEEecccceeeEEee-----ccccceeeeeecCCCCeEEecCCccEEEEeeccCc-e------eeeeEEcCcceEEEEE
Confidence 4555677777666654 45899999999999999999999999999999875 1 123333 345569999
Q ss_pred EEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCc--eEEEecCcc
Q 004989 663 CWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLL--IIFRYGMFQ 713 (720)
Q Consensus 663 ~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~-------v~~v~~~~~~--~~~~~~~~~ 713 (720)
+|||.+.+.+||||-|+|||||.+.+..+..| |+||+|-+.+ -++.+|+=|
T Consensus 147 ~fnPkD~ntFaS~sLDrTVKVWslgs~~~nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD 206 (794)
T KOG0276|consen 147 AFNPKDPNTFASASLDRTVKVWSLGSPHPNFTLEGHEKGVNCVDYYTGGDKPYLISGADD 206 (794)
T ss_pred EecCCCccceeeeeccccEEEEEcCCCCCceeeeccccCcceEEeccCCCcceEEecCCC
Confidence 99999999999999999999999988777666 8999997766 577777655
Done!