Query 004989
Match_columns 720
No_of_seqs 736 out of 3609
Neff 7.9
Searched_HMMs 29240
Date Mon Mar 25 11:59:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004989.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004989hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fpq_A Serine/threonine-protei 100.0 1.2E-45 4E-50 388.9 16.1 211 63-367 71-289 (290)
2 4g31_A Eukaryotic translation 100.0 1.1E-45 3.6E-50 391.8 13.2 246 42-367 30-286 (299)
3 4fih_A Serine/threonine-protei 100.0 9.4E-45 3.2E-49 390.0 17.3 239 30-368 80-331 (346)
4 3hyh_A Carbon catabolite-derep 100.0 4.8E-45 1.7E-49 381.1 14.0 227 42-367 38-269 (275)
5 4b9d_A Serine/threonine-protei 100.0 4.4E-45 1.5E-49 393.1 13.8 243 29-367 29-283 (350)
6 4aw0_A HPDK1, 3-phosphoinositi 100.0 3.1E-45 1.1E-49 388.1 11.2 244 28-367 36-297 (311)
7 4fie_A Serine/threonine-protei 100.0 9.8E-44 3.3E-48 391.3 17.6 240 29-368 156-408 (423)
8 3ubd_A Ribosomal protein S6 ki 100.0 1.4E-44 4.7E-49 382.8 9.4 210 61-367 70-288 (304)
9 4g3f_A NF-kappa-beta-inducing 100.0 3.5E-44 1.2E-48 384.4 12.5 215 65-370 98-332 (336)
10 4b99_A Mitogen-activated prote 100.0 5.5E-43 1.9E-47 385.0 14.8 221 63-371 99-355 (398)
11 3omv_A RAF proto-oncogene seri 100.0 1.6E-41 5.6E-46 360.0 15.7 238 29-360 41-293 (307)
12 4f9c_A Cell division cycle 7-r 100.0 7.6E-41 2.6E-45 363.9 15.8 236 62-367 64-359 (361)
13 4asz_A BDNF/NT-3 growth factor 100.0 2.1E-40 7.1E-45 350.9 11.6 204 63-359 61-281 (299)
14 4gt4_A Tyrosine-protein kinase 100.0 3.4E-40 1.2E-44 350.8 12.1 223 43-361 57-300 (308)
15 3v5w_A G-protein coupled recep 100.0 2.2E-40 7.4E-45 380.8 10.6 203 66-367 241-456 (689)
16 4aoj_A High affinity nerve gro 100.0 3.2E-39 1.1E-43 346.4 16.0 205 63-360 89-312 (329)
17 3uto_A Twitchin; kinase, muscl 100.0 5.7E-39 2E-43 369.5 16.1 209 65-369 202-419 (573)
18 3hmm_A TGF-beta receptor type- 100.0 3.4E-39 1.1E-43 342.9 9.8 228 41-360 25-290 (303)
19 4ase_A Vascular endothelial gr 100.0 9.1E-39 3.1E-43 345.8 10.9 208 63-361 113-341 (353)
20 3qd2_B Eukaryotic translation 100.0 1.1E-36 3.7E-41 325.3 14.3 226 63-366 50-331 (332)
21 3fe3_A MAP/microtubule affinit 100.0 3.5E-36 1.2E-40 323.3 16.2 208 63-368 60-272 (328)
22 2yab_A Death-associated protei 100.0 8.5E-36 2.9E-40 324.6 18.5 208 63-367 61-279 (361)
23 3o0g_A Cell division protein k 100.0 8.6E-36 2.9E-40 313.8 17.5 211 63-367 47-289 (292)
24 3fxz_A Serine/threonine-protei 100.0 9.2E-36 3.1E-40 315.2 17.6 210 64-369 64-278 (297)
25 3p1a_A MYT1 kinase, membrane-a 100.0 4.9E-36 1.7E-40 319.3 15.5 208 63-367 102-311 (311)
26 3niz_A Rhodanese family protei 100.0 8.7E-36 3E-40 317.5 15.4 212 63-368 65-308 (311)
27 3ttj_A Mitogen-activated prote 100.0 1.3E-35 4.3E-40 333.9 16.7 214 62-370 106-365 (464)
28 3g33_A Cell division protein k 100.0 3.1E-35 1.1E-39 312.0 18.7 210 66-367 60-303 (308)
29 1ob3_A PFPK5, cell division co 100.0 1.8E-35 6.2E-40 310.9 15.4 211 63-367 46-287 (288)
30 1fot_A TPK1 delta, CAMP-depend 100.0 1.9E-35 6.4E-40 316.3 15.4 202 65-367 54-265 (318)
31 1cm8_A Phosphorylated MAP kina 100.0 2.6E-35 8.9E-40 321.4 16.8 213 63-371 70-318 (367)
32 3oz6_A Mitogen-activated prote 100.0 1.6E-35 5.6E-40 325.1 15.0 237 61-370 52-338 (388)
33 3zgw_A Maternal embryonic leuc 100.0 1.5E-35 5.2E-40 320.8 14.5 209 63-367 54-267 (347)
34 2y0a_A Death-associated protei 100.0 4.2E-35 1.4E-39 314.4 17.4 208 63-367 60-278 (326)
35 1tki_A Titin; serine kinase, m 100.0 1.3E-35 4.3E-40 317.9 13.3 209 64-368 48-265 (321)
36 1o6l_A RAC-beta serine/threoni 100.0 3.8E-35 1.3E-39 316.5 16.7 207 63-367 51-267 (337)
37 2bdw_A Hypothetical protein K1 100.0 3.5E-35 1.2E-39 319.8 16.5 208 63-367 74-291 (362)
38 3rp9_A Mitogen-activated prote 100.0 2.7E-35 9.3E-40 330.6 15.4 244 63-370 98-406 (458)
39 3txo_A PKC-L, NPKC-ETA, protei 100.0 7.6E-36 2.6E-40 324.0 10.4 205 65-367 71-287 (353)
40 1t4h_A Serine/threonine-protei 100.0 6.8E-35 2.3E-39 306.5 16.9 211 63-367 71-289 (290)
41 1rdq_E PKA C-alpha, CAMP-depen 100.0 3.7E-35 1.3E-39 318.2 14.9 203 64-367 88-300 (350)
42 1u5q_A Serine/threonine protei 100.0 3.6E-35 1.2E-39 318.0 14.4 229 42-369 79-314 (348)
43 3mi9_A Cell division protein k 100.0 1.3E-34 4.5E-39 313.1 18.5 221 62-370 61-321 (351)
44 4aw2_A Serine/threonine-protei 100.0 2.3E-35 7.8E-40 328.9 12.2 209 66-367 123-345 (437)
45 3soa_A Calcium/calmodulin-depe 100.0 9.3E-35 3.2E-39 324.9 16.9 208 63-366 56-273 (444)
46 4fr4_A YANK1, serine/threonine 100.0 3.9E-35 1.3E-39 321.7 13.4 207 63-367 61-278 (384)
47 3h4j_B AMPK kdaid, SNF1-like p 100.0 7.6E-36 2.6E-40 321.8 7.6 206 63-367 55-265 (336)
48 1xjd_A Protein kinase C, theta 100.0 1.4E-35 4.8E-40 320.9 9.7 205 65-367 65-276 (345)
49 2eue_A Carbon catabolite derep 100.0 7.9E-35 2.7E-39 303.6 14.9 207 63-367 59-269 (275)
50 2pmi_A Negative RE, cyclin-dep 100.0 9.9E-35 3.4E-39 310.0 15.5 213 63-369 49-302 (317)
51 1kob_A Twitchin; kinase, intra 100.0 1.1E-34 3.8E-39 318.7 16.3 211 63-369 94-313 (387)
52 3dbq_A Dual specificity protei 100.0 5.8E-35 2E-39 315.3 13.2 214 63-370 53-283 (343)
53 3nyv_A Calmodulin-domain prote 100.0 2.7E-34 9.3E-39 324.7 19.2 208 62-367 71-288 (484)
54 2w4o_A Calcium/calmodulin-depe 100.0 2.4E-34 8.3E-39 311.6 17.7 209 65-369 96-314 (349)
55 3gni_B Strad alpha; kinase fol 100.0 1E-34 3.5E-39 318.8 14.9 238 42-368 52-341 (389)
56 3tki_A Serine/threonine-protei 100.0 4E-35 1.4E-39 314.2 11.4 210 65-367 53-268 (323)
57 4dc2_A Protein kinase C IOTA t 100.0 8.9E-35 3E-39 320.1 14.3 206 65-367 100-325 (396)
58 3v8s_A RHO-associated protein 100.0 3.8E-35 1.3E-39 324.6 11.4 206 66-367 118-336 (410)
59 3uc3_A Serine/threonine-protei 100.0 1.2E-34 4.1E-39 315.5 15.1 208 64-367 63-281 (361)
60 3c0i_A Peripheral plasma membr 100.0 1.5E-34 5.1E-39 313.4 15.7 208 64-367 73-293 (351)
61 2fst_X Mitogen-activated prote 100.0 4.8E-35 1.6E-39 319.4 11.8 214 63-372 74-323 (367)
62 3a8x_A Protein kinase C IOTA t 100.0 1.9E-34 6.6E-39 311.9 16.0 207 64-367 56-282 (345)
63 2r5t_A Serine/threonine-protei 100.0 7.2E-35 2.5E-39 318.6 12.5 204 66-367 87-300 (373)
64 2zv2_A Calcium/calmodulin-depe 100.0 1.5E-34 5.2E-39 305.2 14.0 208 64-366 83-298 (298)
65 2x4f_A Myosin light chain kina 100.0 1.5E-34 5E-39 316.3 13.8 209 64-367 133-349 (373)
66 3is5_A Calcium-dependent prote 100.0 3.7E-34 1.3E-38 300.6 16.2 209 62-366 65-284 (285)
67 2zmd_A Dual specificity protei 100.0 1.4E-34 4.8E-39 318.2 13.6 213 63-369 100-329 (390)
68 2a2a_A Death-associated protei 100.0 5.8E-34 2E-38 304.3 17.9 209 63-368 61-280 (321)
69 2vd5_A DMPK protein; serine/th 100.0 9.4E-35 3.2E-39 321.6 12.0 206 66-367 110-334 (412)
70 3n9x_A Phosphotransferase; mal 100.0 3.6E-34 1.2E-38 319.3 16.4 242 62-373 70-374 (432)
71 1zy4_A Serine/threonine-protei 100.0 3.6E-34 1.2E-38 301.4 15.5 228 64-367 49-290 (303)
72 3mtl_A Cell division protein k 100.0 2.7E-34 9.3E-39 307.6 14.5 213 63-369 46-290 (324)
73 3kk8_A Calcium/calmodulin depe 100.0 3.7E-34 1.3E-38 299.4 15.0 211 63-370 51-271 (284)
74 4ejn_A RAC-alpha serine/threon 100.0 3.4E-34 1.2E-38 320.7 15.5 207 63-367 194-411 (446)
75 2i0e_A Protein kinase C-beta I 100.0 2.5E-34 8.5E-39 312.1 13.9 206 64-367 67-283 (353)
76 2c30_A Serine/threonine-protei 100.0 1.2E-33 4.2E-38 302.3 19.0 208 64-368 89-302 (321)
77 3gbz_A Kinase, CMGC CDK; ssgci 100.0 2.3E-34 7.8E-39 308.8 13.4 210 63-367 79-325 (329)
78 3mwu_A Calmodulin-domain prote 100.0 1.1E-33 3.7E-38 320.1 19.5 207 63-367 67-283 (486)
79 1x8b_A WEE1HU, WEE1-like prote 100.0 3.3E-34 1.1E-38 299.4 13.9 225 61-367 54-286 (289)
80 2y94_A 5'-AMP-activated protei 100.0 2.4E-34 8.2E-39 323.9 13.6 207 63-367 62-273 (476)
81 3qyz_A Mitogen-activated prote 100.0 1.3E-34 4.3E-39 315.3 10.6 220 63-372 71-325 (364)
82 3dls_A PAS domain-containing s 100.0 6.8E-34 2.3E-38 306.3 16.2 203 63-369 75-283 (335)
83 3ork_A Serine/threonine protei 100.0 9.5E-35 3.2E-39 309.0 9.1 216 63-366 58-279 (311)
84 3rgf_A Cyclin-dependent kinase 100.0 7.5E-34 2.6E-38 313.8 16.5 217 63-368 64-341 (405)
85 3pg1_A Mitogen-activated prote 100.0 3E-34 1E-38 311.5 12.9 220 63-373 75-329 (362)
86 3fdn_A Serine/threonine-protei 100.0 1.9E-34 6.4E-39 301.4 10.7 204 64-367 56-264 (279)
87 3a62_A Ribosomal protein S6 ki 100.0 2.7E-34 9.1E-39 308.3 11.9 207 63-367 67-283 (327)
88 3llt_A Serine/threonine kinase 100.0 5.7E-34 1.9E-38 309.0 14.5 203 65-365 79-360 (360)
89 3kn6_A Ribosomal protein S6 ki 100.0 4.5E-34 1.5E-38 306.3 13.4 210 63-367 51-277 (325)
90 3lij_A Calcium/calmodulin depe 100.0 1.4E-33 4.9E-38 319.8 17.9 207 63-367 82-298 (494)
91 2xrw_A Mitogen-activated prote 100.0 3.9E-34 1.3E-38 312.4 12.7 213 63-370 70-328 (371)
92 3f3z_A Calcium/calmodulin-depe 100.0 1.3E-33 4.3E-38 294.6 15.8 207 63-367 52-268 (277)
93 4exu_A Mitogen-activated prote 100.0 2.5E-34 8.5E-39 314.0 10.7 214 63-373 87-336 (371)
94 3fme_A Dual specificity mitoge 100.0 3.1E-34 1.1E-38 300.8 11.0 207 66-367 55-273 (290)
95 3i6u_A CDS1, serine/threonine- 100.0 5E-34 1.7E-38 316.9 13.2 208 63-367 186-406 (419)
96 2r3i_A Cell division protein k 100.0 1.5E-33 5.2E-38 297.1 16.1 214 63-370 48-293 (299)
97 1ua2_A CAK, cell division prot 100.0 1E-33 3.5E-38 305.9 14.7 212 63-368 58-299 (346)
98 2yex_A Serine/threonine-protei 100.0 8.1E-34 2.8E-38 295.4 13.2 214 63-369 51-270 (276)
99 3q5i_A Protein kinase; CDPK, m 100.0 3E-33 1E-37 317.9 18.9 209 63-369 92-310 (504)
100 1nxk_A MAP kinase-activated pr 100.0 6.8E-34 2.3E-38 313.9 13.1 211 66-367 103-328 (400)
101 2acx_A G protein-coupled recep 100.0 3.8E-34 1.3E-38 327.6 11.4 206 65-367 232-451 (576)
102 3lm5_A Serine/threonine-protei 100.0 8.8E-34 3E-38 304.0 13.4 210 62-367 73-294 (327)
103 3pfq_A PKC-B, PKC-beta, protei 100.0 5.2E-34 1.8E-38 334.7 12.6 205 65-367 389-604 (674)
104 4e7w_A Glycogen synthase kinas 100.0 1.4E-33 4.8E-38 310.7 15.3 214 65-369 80-330 (394)
105 2ac3_A MAP kinase-interacting 100.0 1.3E-33 4.4E-38 300.2 13.8 217 63-367 56-302 (316)
106 3coi_A Mitogen-activated prote 100.0 4.5E-34 1.5E-38 309.3 10.1 213 63-372 69-317 (353)
107 3cok_A Serine/threonine-protei 100.0 8.3E-34 2.9E-38 296.1 11.6 209 63-368 57-270 (278)
108 4agu_A Cyclin-dependent kinase 100.0 1.4E-33 4.6E-38 299.4 13.4 212 63-369 48-293 (311)
109 2j7t_A Serine/threonine-protei 100.0 1.4E-33 4.9E-38 297.7 13.5 213 63-370 62-285 (302)
110 4eqm_A Protein kinase; transfe 100.0 1.6E-33 5.6E-38 297.3 13.5 212 60-365 54-272 (294)
111 3eb0_A Putative uncharacterize 100.0 2.1E-33 7.1E-38 307.9 14.6 214 65-369 48-330 (383)
112 3kvw_A DYRK2, dual specificity 100.0 2E-33 7E-38 312.9 14.6 197 74-367 156-415 (429)
113 3eqc_A Dual specificity mitoge 100.0 7.5E-34 2.5E-38 308.3 10.8 208 63-367 77-331 (360)
114 1j1b_A Glycogen synthase kinas 100.0 2.3E-33 7.9E-38 311.6 14.9 214 65-369 95-345 (420)
115 3hko_A Calcium/calmodulin-depe 100.0 1.5E-33 5.1E-38 303.6 12.5 218 63-370 74-340 (345)
116 3byv_A Rhoptry kinase; malaria 100.0 7.4E-35 2.5E-39 318.7 2.0 203 66-368 122-367 (377)
117 2owb_A Serine/threonine-protei 100.0 3.7E-33 1.3E-37 300.1 14.3 208 63-368 87-299 (335)
118 3nsz_A CK II alpha, casein kin 100.0 2.8E-33 9.7E-38 299.5 13.1 209 63-368 76-327 (330)
119 1blx_A Cyclin-dependent kinase 100.0 4.6E-33 1.6E-37 297.1 14.7 213 66-369 60-305 (326)
120 3an0_A Dual specificity mitoge 100.0 1.5E-33 5E-38 303.4 10.4 203 70-367 103-317 (340)
121 4aaa_A Cyclin-dependent kinase 100.0 4E-33 1.4E-37 299.1 13.7 210 63-367 70-313 (331)
122 2pml_X PFPK7, Ser/Thr protein 100.0 3.5E-33 1.2E-37 301.0 13.2 210 63-368 89-330 (348)
123 2vgo_A Serine/threonine-protei 100.0 4.2E-33 1.4E-37 291.9 13.3 205 63-367 60-269 (284)
124 3c4z_A Rhodopsin kinase; Ser/T 100.0 4.3E-33 1.5E-37 317.7 14.5 208 64-367 232-455 (543)
125 3e3p_A Protein kinase, putativ 100.0 4.8E-33 1.6E-37 301.4 14.2 217 63-370 65-324 (360)
126 2qr7_A Ribosomal protein S6 ki 100.0 2.6E-33 9E-38 302.7 11.8 207 66-367 64-284 (342)
127 2vwi_A Serine/threonine-protei 100.0 5E-33 1.7E-37 293.2 13.4 216 64-368 60-295 (303)
128 3com_A Serine/threonine-protei 100.0 1.3E-32 4.4E-37 292.3 16.5 212 64-369 71-287 (314)
129 3p23_A Serine/threonine-protei 100.0 3.9E-33 1.3E-37 310.8 13.1 212 64-367 64-290 (432)
130 2jam_A Calcium/calmodulin-depe 100.0 6.1E-33 2.1E-37 293.8 13.8 206 64-367 53-268 (304)
131 2y7j_A Phosphorylase B kinase 100.0 1.1E-32 3.8E-37 300.3 16.0 205 65-366 147-365 (365)
132 3bhy_A Death-associated protei 100.0 6E-33 2.1E-37 290.1 13.2 208 63-367 54-272 (283)
133 3a7i_A MST3 kinase, serine/thr 100.0 9.6E-33 3.3E-37 291.9 14.8 207 63-367 66-277 (303)
134 2ycf_A Serine/threonine-protei 100.0 3.3E-33 1.1E-37 298.4 11.4 208 63-367 61-281 (322)
135 2h6d_A 5'-AMP-activated protei 100.0 4.1E-33 1.4E-37 290.3 11.6 207 63-368 57-269 (276)
136 3lb7_A RAF proto-oncogene seri 100.0 1.6E-32 5.4E-37 291.8 16.3 208 63-363 78-296 (307)
137 2rku_A Serine/threonine-protei 100.0 9.7E-33 3.3E-37 290.6 14.5 207 63-367 61-272 (294)
138 3cek_A Dual specificity protei 100.0 5.4E-33 1.8E-37 295.4 12.7 216 63-372 72-304 (313)
139 3q60_A ROP5B; pseudokinase, tr 100.0 1.7E-34 6E-39 315.0 0.9 207 68-368 116-360 (371)
140 1wak_A Serine/threonine-protei 100.0 2.3E-33 7.9E-38 307.3 9.7 253 65-366 81-397 (397)
141 3p86_A Serine/threonine-protei 100.0 7.5E-33 2.6E-37 294.7 13.1 203 63-360 80-291 (309)
142 2b9h_A MAP kinase FUS3, mitoge 100.0 7.8E-33 2.7E-37 298.9 13.3 225 63-370 55-315 (353)
143 2x7f_A TRAF2 and NCK-interacti 100.0 1.3E-32 4.5E-37 293.7 14.9 214 64-368 67-294 (326)
144 3kmu_A ILK, integrin-linked ki 100.0 1.8E-32 6.2E-37 283.9 14.7 200 63-360 53-263 (271)
145 2w5a_A Serine/threonine-protei 100.0 7.2E-33 2.5E-37 288.9 11.6 214 63-369 51-276 (279)
146 2i6l_A Mitogen-activated prote 100.0 1.3E-32 4.3E-37 292.2 13.7 219 63-371 54-316 (320)
147 2clq_A Mitogen-activated prote 100.0 1.5E-32 5.1E-37 288.7 14.1 212 63-368 65-286 (295)
148 1z57_A Dual specificity protei 100.0 9.8E-33 3.3E-37 295.2 12.7 207 65-369 59-337 (339)
149 3kex_A Receptor tyrosine-prote 100.0 1.2E-32 4E-37 294.9 13.3 206 62-361 60-270 (325)
150 3soc_A Activin receptor type-2 100.0 4.3E-33 1.5E-37 298.0 9.9 211 60-360 61-311 (322)
151 1vzo_A Ribosomal protein S6 ki 100.0 1.1E-32 3.6E-37 299.3 12.5 208 64-367 105-328 (355)
152 2psq_A Fibroblast growth facto 100.0 2.1E-32 7.3E-37 298.7 14.9 205 63-360 132-357 (370)
153 3kul_A Ephrin type-A receptor 100.0 2E-32 6.8E-37 293.4 14.3 206 63-360 96-306 (325)
154 4f0f_A Serine/threonine-protei 100.0 4.4E-32 1.5E-36 284.4 16.6 199 63-360 69-282 (287)
155 4hcu_A Tyrosine-protein kinase 100.0 1.6E-32 5.4E-37 285.2 13.0 204 64-361 52-260 (269)
156 1phk_A Phosphorylase kinase; g 100.0 3E-32 1E-36 287.1 15.2 207 65-368 71-291 (298)
157 4euu_A Serine/threonine-protei 100.0 1.2E-32 4.2E-37 293.6 12.4 206 64-362 54-304 (319)
158 1mp8_A Focal adhesion kinase 1 100.0 1E-32 3.5E-37 288.7 11.1 203 63-360 62-269 (281)
159 3s95_A LIMK-1, LIM domain kina 100.0 3.6E-33 1.2E-37 296.4 7.7 215 63-360 53-275 (310)
160 3vhe_A Vascular endothelial gr 100.0 1E-32 3.5E-37 298.7 10.5 208 63-361 71-349 (359)
161 3fhr_A MAP kinase-activated pr 100.0 4.6E-33 1.6E-37 299.8 7.2 206 70-367 75-294 (336)
162 3ugc_A Tyrosine-protein kinase 100.0 1.7E-32 5.8E-37 288.9 11.0 209 63-360 57-284 (295)
163 3poz_A Epidermal growth factor 100.0 1.8E-32 6.2E-37 293.8 11.4 204 63-360 63-271 (327)
164 3sxs_A Cytoplasmic tyrosine-pr 100.0 2.8E-32 9.7E-37 282.9 12.2 204 64-361 50-258 (268)
165 3dtc_A Mitogen-activated prote 100.0 2.2E-32 7.5E-37 284.0 11.1 200 63-361 52-267 (271)
166 3qup_A Tyrosine-protein kinase 100.0 5.1E-32 1.7E-36 289.0 14.2 215 63-367 71-305 (323)
167 2wtk_C Serine/threonine-protei 100.0 1.1E-31 3.7E-36 283.7 16.5 215 63-369 52-272 (305)
168 4e5w_A Tyrosine-protein kinase 100.0 3.6E-32 1.2E-36 286.9 12.8 210 62-360 68-295 (302)
169 3l9p_A Anaplastic lymphoma kin 100.0 1.7E-32 5.7E-37 299.2 10.5 212 60-364 117-342 (367)
170 2wei_A Calmodulin-domain prote 100.0 3.9E-32 1.3E-36 285.1 12.9 207 63-367 67-283 (287)
171 2vx3_A Dual specificity tyrosi 100.0 4.5E-32 1.5E-36 297.2 13.7 205 66-367 99-379 (382)
172 2eu9_A Dual specificity protei 100.0 5E-32 1.7E-36 291.9 13.5 204 66-367 65-340 (355)
173 3pls_A Macrophage-stimulating 100.0 8.1E-32 2.8E-36 283.5 14.8 209 63-360 68-280 (298)
174 3f66_A Hepatocyte growth facto 100.0 6.1E-32 2.1E-36 284.8 13.7 207 63-360 72-284 (298)
175 3lzb_A Epidermal growth factor 100.0 6.6E-32 2.2E-36 289.6 14.0 205 62-360 62-271 (327)
176 2dyl_A Dual specificity mitoge 100.0 4.1E-32 1.4E-36 288.5 12.3 207 66-367 73-290 (318)
177 3gen_A Tyrosine-protein kinase 100.0 4.6E-32 1.6E-36 283.7 12.5 204 64-361 66-274 (283)
178 1rjb_A FL cytokine receptor; k 100.0 4.5E-32 1.6E-36 292.0 12.8 207 63-361 94-328 (344)
179 3cbl_A C-FES, proto-oncogene t 100.0 2.7E-32 9.1E-37 298.6 10.9 204 63-360 158-367 (377)
180 4fvq_A Tyrosine-protein kinase 100.0 3.2E-32 1.1E-36 285.5 11.0 196 63-360 58-268 (289)
181 3op5_A Serine/threonine-protei 100.0 1.8E-32 6.3E-37 298.1 9.4 212 66-360 97-322 (364)
182 3og7_A AKAP9-BRAF fusion prote 100.0 6.1E-32 2.1E-36 284.1 13.0 205 63-360 66-281 (289)
183 1q8y_A SR protein kinase; tran 100.0 1.9E-32 6.6E-37 297.9 9.3 211 65-368 63-341 (373)
184 3c1x_A Hepatocyte growth facto 100.0 4.8E-32 1.6E-36 296.3 12.3 208 63-360 136-348 (373)
185 1fvr_A Tyrosine-protein kinase 100.0 5.2E-32 1.8E-36 289.8 12.3 202 63-360 71-293 (327)
186 2a19_B Interferon-induced, dou 100.0 4.5E-32 1.5E-36 283.2 11.3 208 64-366 51-273 (284)
187 3tt0_A Basic fibroblast growth 100.0 1.2E-31 4E-36 293.9 15.2 206 62-360 119-345 (382)
188 2qol_A Ephrin receptor; recept 100.0 8.2E-32 2.8E-36 294.4 13.8 206 63-360 92-302 (373)
189 3q4u_A Activin receptor type-1 100.0 2.1E-32 7.1E-37 288.4 8.3 211 62-360 47-295 (301)
190 3cc6_A Protein tyrosine kinase 100.0 5.5E-32 1.9E-36 282.9 10.9 203 63-360 59-266 (281)
191 1u59_A Tyrosine-protein kinase 100.0 1.1E-31 3.7E-36 281.8 13.1 206 63-361 56-266 (287)
192 2rio_A Serine/threonine-protei 100.0 3.7E-32 1.3E-36 303.2 10.1 211 65-367 56-302 (434)
193 2ivs_A Proto-oncogene tyrosine 100.0 1E-31 3.6E-36 284.8 12.9 205 63-360 72-304 (314)
194 2eva_A TAK1 kinase - TAB1 chim 100.0 1.1E-31 3.7E-36 285.2 12.9 199 63-360 47-256 (307)
195 1luf_A Muscle-specific tyrosin 100.0 8.4E-32 2.9E-36 289.4 12.1 205 63-360 96-328 (343)
196 1t46_A HOMO sapiens V-KIT hard 100.0 9.6E-32 3.3E-36 285.0 11.9 206 63-360 72-300 (313)
197 3aln_A Dual specificity mitoge 100.0 7.5E-32 2.6E-36 288.4 11.0 207 66-367 69-292 (327)
198 2izr_A Casein kinase I isoform 100.0 1E-31 3.5E-36 288.0 11.9 210 64-360 51-274 (330)
199 1k9a_A Carboxyl-terminal SRC k 100.0 1.2E-31 4.1E-36 300.5 12.6 200 64-360 233-438 (450)
200 2xir_A Vascular endothelial gr 100.0 7.6E-32 2.6E-36 286.1 10.3 208 63-361 76-304 (316)
201 2h34_A Serine/threonine-protei 100.0 2.1E-31 7.2E-36 283.1 13.4 203 63-360 80-289 (309)
202 1mqb_A Ephrin type-A receptor 100.0 3.7E-31 1.3E-35 284.4 15.1 206 63-360 92-302 (333)
203 3uim_A Brassinosteroid insensi 100.0 4.6E-31 1.6E-35 282.0 15.6 208 63-363 73-307 (326)
204 3t9t_A Tyrosine-protein kinase 100.0 2E-31 6.7E-36 276.0 12.2 203 64-360 50-257 (267)
205 2qkw_B Protein kinase; three-h 100.0 6.8E-32 2.3E-36 288.1 9.0 207 63-361 81-309 (321)
206 2v62_A Serine/threonine-protei 100.0 6.5E-32 2.2E-36 291.7 8.7 211 66-360 97-321 (345)
207 3lxl_A Tyrosine-protein kinase 100.0 1.1E-31 3.7E-36 287.3 10.2 209 63-360 70-296 (327)
208 1csn_A Casein kinase-1; phosph 100.0 1.4E-31 4.7E-36 281.7 10.7 208 66-360 54-276 (298)
209 1p4o_A Insulin-like growth fac 100.0 2.2E-31 7.4E-36 283.8 12.2 206 63-361 74-293 (322)
210 3mdy_A Bone morphogenetic prot 100.0 1.7E-31 5.7E-36 286.1 11.3 210 63-360 77-324 (337)
211 2y4i_B KSR2, HKSR2, kinase sup 100.0 6.7E-31 2.3E-35 279.4 15.7 208 62-360 74-295 (319)
212 1u46_A ACK-1, activated CDC42 100.0 1.3E-31 4.3E-36 281.0 9.8 205 63-360 67-277 (291)
213 3kfa_A Tyrosine-protein kinase 100.0 3.4E-31 1.2E-35 277.5 12.9 204 63-360 55-264 (288)
214 3brb_A Proto-oncogene tyrosine 100.0 5.3E-31 1.8E-35 279.9 14.4 209 63-360 82-301 (313)
215 1xbb_A Tyrosine-protein kinase 100.0 4.2E-31 1.4E-35 277.8 13.1 204 63-360 64-272 (291)
216 2i1m_A Macrophage colony-stimu 100.0 1.3E-31 4.4E-36 287.2 9.2 206 63-360 95-319 (333)
217 1byg_A CSK, protein (C-termina 100.0 1.1E-31 3.9E-36 280.1 8.6 201 63-360 60-266 (278)
218 3lxp_A Non-receptor tyrosine-p 100.0 2.8E-31 9.7E-36 283.2 11.6 207 63-360 79-303 (318)
219 3a99_A Proto-oncogene serine/t 100.0 3.2E-31 1.1E-35 283.2 12.0 205 63-370 92-303 (320)
220 2yfx_A Tyrosine-protein kinase 100.0 2E-31 6.8E-36 285.3 9.8 212 61-365 77-302 (327)
221 2ozo_A Tyrosine-protein kinase 100.0 1.2E-30 4E-35 303.3 17.0 205 63-360 382-591 (613)
222 2wqm_A Serine/threonine-protei 100.0 1.1E-30 3.9E-35 276.9 14.9 204 63-360 78-290 (310)
223 3gxj_A TGF-beta receptor type- 100.0 3.2E-32 1.1E-36 287.1 2.5 208 65-360 45-290 (303)
224 3g2f_A Bone morphogenetic prot 100.0 3.2E-31 1.1E-35 284.2 10.3 216 61-360 51-311 (336)
225 1opk_A P150, C-ABL, proto-onco 100.0 6.4E-31 2.2E-35 298.1 13.2 203 64-360 263-471 (495)
226 2pvf_A Fibroblast growth facto 100.0 8.2E-31 2.8E-35 281.5 13.3 205 63-360 86-311 (334)
227 1qcf_A Haematopoetic cell kina 100.0 4.2E-31 1.4E-35 296.4 11.2 203 63-360 229-437 (454)
228 1qpc_A LCK kinase; alpha beta 100.0 7.3E-31 2.5E-35 273.9 11.5 203 63-360 54-262 (279)
229 2nru_A Interleukin-1 receptor- 100.0 7.9E-31 2.7E-35 277.5 11.9 205 63-360 76-299 (307)
230 4hgt_A Casein kinase I isoform 100.0 1.5E-30 5E-35 273.4 13.5 211 64-360 51-273 (296)
231 4fl3_A Tyrosine-protein kinase 100.0 1.1E-30 3.6E-35 304.6 12.8 203 64-360 417-624 (635)
232 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 8.8E-31 3E-35 293.6 11.5 207 64-366 226-441 (452)
233 2iwi_A Serine/threonine-protei 100.0 1.1E-30 3.9E-35 277.1 11.7 205 63-369 80-292 (312)
234 3uzp_A CKI-delta, CKID, casein 100.0 2.4E-30 8.1E-35 272.0 13.8 211 64-360 51-273 (296)
235 3qa8_A MGC80376 protein; kinas 100.0 1.4E-30 4.9E-35 301.2 13.1 213 63-367 58-304 (676)
236 2w1i_A JAK2; chromosomal rearr 100.0 2E-30 6.8E-35 277.5 12.2 209 63-360 88-315 (326)
237 2buj_A Serine/threonine-protei 100.0 2.7E-30 9.1E-35 274.8 12.9 218 63-361 72-300 (317)
238 2jii_A Serine/threonine-protei 100.0 1.2E-30 4E-35 282.5 8.8 212 64-360 89-329 (352)
239 3ll6_A Cyclin G-associated kin 100.0 1.8E-30 6.2E-35 277.6 10.2 217 63-361 71-302 (337)
240 2j0j_A Focal adhesion kinase 1 100.0 3.9E-30 1.3E-34 300.9 13.5 203 63-360 437-644 (656)
241 1b6c_B TGF-B superfamily recep 100.0 1.3E-30 4.5E-35 280.0 8.2 207 66-360 83-329 (342)
242 4eut_A Serine/threonine-protei 100.0 1.4E-30 4.6E-35 286.9 8.3 204 64-360 54-302 (396)
243 2h8h_A Proto-oncogene tyrosine 100.0 2.8E-30 9.5E-35 295.6 10.1 207 64-366 309-524 (535)
244 3dzo_A Rhoptry kinase domain; 100.0 4.1E-31 1.4E-35 292.8 3.1 175 93-367 177-370 (413)
245 3e7e_A HBUB1, BUB1A, mitotic c 100.0 3E-30 1E-34 280.7 7.5 193 70-360 120-331 (365)
246 3m2w_A MAP kinase-activated pr 100.0 1.9E-29 6.5E-34 266.5 13.1 190 66-368 59-264 (299)
247 2pzi_A Probable serine/threoni 100.0 1.2E-29 4.1E-34 298.7 8.1 198 63-365 125-325 (681)
248 2vuw_A Serine/threonine-protei 100.0 2.6E-29 8.7E-34 270.1 9.7 169 94-365 135-336 (336)
249 3sv0_A Casein kinase I-like; t 100.0 7.8E-29 2.7E-33 279.5 13.5 210 65-360 50-271 (483)
250 3uqc_A Probable conserved tran 99.9 1.2E-27 4.2E-32 251.6 7.6 173 63-360 77-258 (286)
251 4azs_A Methyltransferase WBDD; 99.9 1.3E-25 4.5E-30 258.2 10.9 145 64-307 288-434 (569)
252 3en9_A Glycoprotease, O-sialog 99.7 3.9E-19 1.3E-23 203.1 1.3 93 64-171 386-479 (540)
253 4gqb_B Methylosome protein 50; 99.6 7.3E-15 2.5E-19 158.1 13.7 127 581-716 102-239 (344)
254 3ow8_A WD repeat-containing pr 99.6 1.6E-14 5.3E-19 153.6 15.6 122 581-716 185-314 (321)
255 2ynn_A Coatomer subunit beta'; 99.6 1.9E-14 6.6E-19 151.2 15.2 104 604-716 10-121 (304)
256 4gqb_B Methylosome protein 50; 99.5 2.4E-14 8.2E-19 154.0 14.1 127 578-717 145-283 (344)
257 2pm7_B Protein transport prote 99.5 4.1E-14 1.4E-18 148.2 14.9 108 603-716 5-125 (297)
258 2xzm_R RACK1; ribosome, transl 99.5 5.1E-14 1.7E-18 150.5 15.3 113 602-716 16-142 (343)
259 3frx_A Guanine nucleotide-bind 99.5 4.4E-14 1.5E-18 149.6 14.2 110 602-715 12-130 (319)
260 2ynn_A Coatomer subunit beta'; 99.5 3.6E-14 1.2E-18 149.1 12.7 125 578-716 31-165 (304)
261 1zar_A RIO2 kinase; serine kin 99.5 1.6E-15 5.3E-20 159.0 2.2 89 63-168 150-239 (282)
262 1vyh_C Platelet-activating fac 99.5 3.1E-14 1.1E-18 156.5 12.4 122 580-715 128-257 (410)
263 3bg1_A Protein SEC13 homolog; 99.5 2.6E-14 8.9E-19 151.2 11.0 109 603-717 9-130 (316)
264 1vyh_C Platelet-activating fac 99.5 5.9E-14 2E-18 154.3 14.2 106 603-717 104-217 (410)
265 4g56_B MGC81050 protein; prote 99.5 8.3E-14 2.8E-18 150.2 14.8 125 582-717 204-337 (357)
266 1got_B GT-beta; complex (GTP-b 99.5 1.8E-13 6.3E-18 146.1 16.6 121 581-715 163-293 (340)
267 1got_B GT-beta; complex (GTP-b 99.5 1.3E-13 4.5E-18 147.2 15.4 123 581-717 205-337 (340)
268 2ymu_A WD-40 repeat protein; u 99.5 1.4E-13 4.7E-18 156.8 15.3 104 602-716 11-122 (577)
269 4gq1_A NUP37; propeller, trans 99.5 4E-14 1.4E-18 154.7 10.0 109 601-716 130-279 (393)
270 3fm0_A Protein CIAO1; WDR39,SG 99.5 1.9E-13 6.4E-18 146.4 14.7 116 591-717 4-130 (345)
271 2hes_X YDR267CP; beta-propelle 99.5 2.8E-13 9.5E-18 144.2 15.6 110 605-716 56-177 (330)
272 4ery_A WD repeat-containing pr 99.5 3.6E-13 1.2E-17 141.2 16.1 104 604-716 20-131 (312)
273 3ow8_A WD repeat-containing pr 99.5 2.4E-13 8.3E-18 144.3 14.9 103 605-716 162-272 (321)
274 1nr0_A Actin interacting prote 99.5 2.6E-13 8.9E-18 157.1 16.2 131 581-717 169-349 (611)
275 2hes_X YDR267CP; beta-propelle 99.5 2.4E-13 8.2E-18 144.7 14.6 108 603-715 103-222 (330)
276 1erj_A Transcriptional repress 99.5 3.9E-13 1.3E-17 146.7 16.6 124 581-717 144-281 (393)
277 2pbi_B Guanine nucleotide-bind 99.5 3.9E-13 1.3E-17 144.7 15.9 123 581-717 219-351 (354)
278 4e54_B DNA damage-binding prot 99.5 1.3E-13 4.6E-18 152.3 12.5 108 605-717 117-234 (435)
279 4ery_A WD repeat-containing pr 99.5 4.8E-13 1.6E-17 140.2 15.4 122 581-716 44-173 (312)
280 3fm0_A Protein CIAO1; WDR39,SG 99.5 4.4E-13 1.5E-17 143.5 14.4 106 604-716 58-174 (345)
281 2w18_A PALB2, fancn, partner a 99.4 2.5E-13 8.4E-18 144.5 12.1 106 605-718 176-352 (356)
282 2aq5_A Coronin-1A; WD40 repeat 99.4 1E-12 3.6E-17 143.1 16.9 115 602-717 76-201 (402)
283 3iz6_a 40S ribosomal protein R 99.4 6.8E-13 2.3E-17 144.1 15.2 130 580-717 178-323 (380)
284 3iz6_a 40S ribosomal protein R 99.4 4.4E-13 1.5E-17 145.5 13.6 107 602-717 244-369 (380)
285 2pbi_B Guanine nucleotide-bind 99.4 8.3E-13 2.8E-17 142.1 15.4 106 603-716 150-264 (354)
286 4h5i_A Guanine nucleotide-exch 99.4 4.2E-13 1.4E-17 145.2 13.0 109 603-716 215-336 (365)
287 3f3f_A Nucleoporin SEH1; struc 99.4 8.7E-13 3E-17 138.0 14.8 111 603-717 7-137 (351)
288 4aow_A Guanine nucleotide-bind 99.4 1.6E-12 5.6E-17 136.7 16.6 119 590-717 26-153 (340)
289 4aow_A Guanine nucleotide-bind 99.4 1.2E-12 4E-17 137.9 15.3 121 582-717 195-331 (340)
290 4h5i_A Guanine nucleotide-exch 99.4 3.7E-13 1.3E-17 145.7 11.6 79 602-689 264-344 (365)
291 3frx_A Guanine nucleotide-bind 99.4 1.9E-12 6.7E-17 136.9 16.1 125 580-717 85-221 (319)
292 4g56_B MGC81050 protein; prote 99.4 7.4E-13 2.5E-17 142.8 12.3 129 578-716 157-294 (357)
293 2xzm_R RACK1; ribosome, transl 99.4 1.7E-12 5.8E-17 138.7 14.5 124 580-717 96-238 (343)
294 1erj_A Transcriptional repress 99.4 2.2E-12 7.6E-17 140.6 15.7 135 582-717 229-383 (393)
295 3zwl_B Eukaryotic translation 99.4 2.8E-12 9.5E-17 136.0 15.9 102 603-713 28-136 (369)
296 1nr0_A Actin interacting prote 99.4 2.6E-12 8.9E-17 148.7 16.5 107 601-716 141-263 (611)
297 2pm7_B Protein transport prote 99.4 3.3E-12 1.1E-16 133.6 15.7 109 603-716 95-231 (297)
298 3vu4_A KMHSV2; beta-propeller 99.4 1.9E-12 6.5E-17 139.4 13.9 103 603-714 191-327 (355)
299 3mmy_A MRNA export factor; mRN 99.4 3.7E-12 1.3E-16 135.0 15.8 108 603-717 35-154 (368)
300 3k26_A Polycomb protein EED; W 99.4 3E-12 1E-16 135.8 14.4 126 583-716 45-185 (366)
301 3jrp_A Fusion protein of prote 99.4 1.9E-12 6.4E-17 138.1 12.7 108 603-716 7-127 (379)
302 3dm0_A Maltose-binding peripla 99.4 2.6E-12 9E-17 150.7 14.7 112 601-716 376-496 (694)
303 2ymu_A WD-40 repeat protein; u 99.3 4.4E-12 1.5E-16 144.3 14.0 104 603-717 463-574 (577)
304 2j04_B YDR362CP, TAU91; beta p 99.3 1.2E-12 4E-17 149.0 9.1 107 603-717 304-422 (524)
305 3lrv_A PRE-mRNA-splicing facto 99.3 6.8E-12 2.3E-16 133.8 14.2 103 605-716 123-238 (343)
306 3vl1_A 26S proteasome regulato 99.3 7.3E-12 2.5E-16 136.4 14.6 120 582-715 119-270 (420)
307 3ei3_B DNA damage-binding prot 99.3 1.1E-11 3.9E-16 133.5 15.6 114 590-717 61-188 (383)
308 2oit_A Nucleoporin 214KDA; NH2 99.3 3.4E-12 1.2E-16 141.8 11.4 110 606-715 91-215 (434)
309 2pm9_A Protein WEB1, protein t 99.3 5.8E-12 2E-16 136.6 13.1 130 581-717 187-331 (416)
310 2j04_A TAU60, YPL007P, hypothe 99.3 8.3E-12 2.8E-16 140.8 14.2 100 605-717 83-205 (588)
311 3dm0_A Maltose-binding peripla 99.3 7.9E-12 2.7E-16 146.7 14.0 128 580-716 450-585 (694)
312 2oaj_A Protein SNI1; WD40 repe 99.3 9.3E-12 3.2E-16 150.8 14.7 101 605-715 15-121 (902)
313 3dwl_C Actin-related protein 2 99.3 6.8E-12 2.3E-16 134.7 11.1 108 602-715 50-169 (377)
314 2oaj_A Protein SNI1; WD40 repe 99.3 1.4E-11 5E-16 149.1 15.1 111 605-717 486-655 (902)
315 3bg1_A Protein SEC13 homolog; 99.3 6.3E-12 2.2E-16 132.8 10.6 110 603-717 146-287 (316)
316 3dwl_C Actin-related protein 2 99.3 6E-12 2.1E-16 135.1 10.2 111 606-717 145-276 (377)
317 2j04_B YDR362CP, TAU91; beta p 99.3 4.9E-12 1.7E-16 143.9 9.7 105 602-714 261-377 (524)
318 4e54_B DNA damage-binding prot 99.3 7.5E-12 2.6E-16 138.2 10.6 102 606-716 208-320 (435)
319 3ei3_B DNA damage-binding prot 99.3 3E-11 1E-15 130.2 15.1 104 605-717 161-276 (383)
320 3lrv_A PRE-mRNA-splicing facto 99.3 1.8E-11 6.1E-16 130.6 12.9 120 580-712 147-280 (343)
321 4a11_B DNA excision repair pro 99.3 3E-11 1E-15 130.1 14.7 112 603-714 39-166 (408)
322 4aez_A CDC20, WD repeat-contai 99.3 3.9E-11 1.3E-15 130.8 15.7 105 603-715 213-328 (401)
323 2aq5_A Coronin-1A; WD40 repeat 99.2 4E-11 1.4E-15 130.5 14.6 104 603-715 127-246 (402)
324 1k8k_C P40, ARP2/3 complex 41 99.2 2.8E-11 9.6E-16 128.9 13.0 104 606-716 7-120 (372)
325 3mkq_A Coatomer beta'-subunit; 99.2 3.8E-11 1.3E-15 142.5 15.4 104 603-715 9-120 (814)
326 1zth_A RIO1 serine protein kin 99.2 2.6E-12 9E-17 132.4 4.6 96 63-172 116-220 (258)
327 1pgu_A Actin interacting prote 99.2 4E-11 1.4E-15 136.9 14.9 122 583-717 468-608 (615)
328 3vl1_A 26S proteasome regulato 99.2 2.3E-11 7.9E-16 132.4 12.1 99 608-715 98-204 (420)
329 3f3f_A Nucleoporin SEH1; struc 99.2 6.3E-11 2.2E-15 123.7 14.0 114 604-717 107-331 (351)
330 3jro_A Fusion protein of prote 99.2 2.7E-11 9.4E-16 143.8 12.6 108 603-716 5-125 (753)
331 3dw8_B Serine/threonine-protei 99.2 5.8E-11 2E-15 130.1 14.1 112 603-715 173-308 (447)
332 2xyi_A Probable histone-bindin 99.2 4.1E-11 1.4E-15 132.2 12.7 112 604-716 178-302 (430)
333 3sfz_A APAF-1, apoptotic pepti 99.2 6.7E-11 2.3E-15 147.5 16.1 103 603-714 611-723 (1249)
334 1yfq_A Cell cycle arrest prote 99.2 5.5E-11 1.9E-15 125.2 13.0 108 604-717 8-125 (342)
335 1gxr_A ESG1, transducin-like e 99.2 1.4E-10 4.6E-15 121.4 15.9 119 583-716 206-330 (337)
336 3sfz_A APAF-1, apoptotic pepti 99.2 6.4E-11 2.2E-15 147.7 15.6 123 580-715 635-766 (1249)
337 3gre_A Serine/threonine-protei 99.2 4.5E-11 1.6E-15 131.2 12.6 120 591-717 51-195 (437)
338 4gq1_A NUP37; propeller, trans 99.2 8.8E-12 3E-16 136.0 6.7 110 605-717 87-212 (393)
339 3jrp_A Fusion protein of prote 99.2 9.3E-11 3.2E-15 124.8 14.6 125 582-716 79-233 (379)
340 4gga_A P55CDC, cell division c 99.2 1.2E-10 4.1E-15 127.9 15.5 123 581-717 124-255 (420)
341 3k26_A Polycomb protein EED; W 99.2 3.8E-11 1.3E-15 127.2 11.2 121 580-716 93-253 (366)
342 1gxr_A ESG1, transducin-like e 99.2 1.9E-10 6.3E-15 120.4 16.3 119 583-715 164-288 (337)
343 1sq9_A Antiviral protein SKI8; 99.2 1E-10 3.4E-15 126.1 14.7 124 583-717 208-389 (397)
344 2xyi_A Probable histone-bindin 99.2 9.1E-11 3.1E-15 129.4 14.4 105 605-716 275-403 (430)
345 3i2n_A WD repeat-containing pr 99.2 4.3E-11 1.5E-15 126.5 11.2 126 583-717 191-347 (357)
346 3vu4_A KMHSV2; beta-propeller 99.2 1.9E-10 6.5E-15 123.6 15.5 127 583-716 82-264 (355)
347 2pm9_A Protein WEB1, protein t 99.2 2.9E-11 9.7E-16 131.1 8.9 105 605-717 260-408 (416)
348 3dw8_B Serine/threonine-protei 99.2 1.2E-10 4.2E-15 127.5 13.9 131 581-717 197-367 (447)
349 2j04_A TAU60, YPL007P, hypothe 99.2 7.5E-11 2.6E-15 133.1 12.1 102 609-717 131-249 (588)
350 1k8k_C P40, ARP2/3 complex 41 99.2 1.9E-10 6.4E-15 122.5 14.6 107 604-711 139-263 (372)
351 1r5m_A SIR4-interacting protei 99.2 1.9E-10 6.4E-15 124.3 14.8 102 604-715 244-353 (425)
352 3mmy_A MRNA export factor; mRN 99.2 1.2E-10 3.9E-15 123.4 12.7 95 604-707 83-185 (368)
353 3i2n_A WD repeat-containing pr 99.2 5.7E-11 1.9E-15 125.6 10.1 106 605-716 16-141 (357)
354 3mkq_A Coatomer beta'-subunit; 99.2 1E-10 3.6E-15 138.7 13.4 122 581-716 34-165 (814)
355 2vdu_B TRNA (guanine-N(7)-)-me 99.2 1.6E-10 5.6E-15 128.0 14.1 100 602-711 190-326 (450)
356 3zwl_B Eukaryotic translation 99.2 3.7E-10 1.3E-14 119.5 16.2 120 584-717 199-340 (369)
357 4aez_A CDC20, WD repeat-contai 99.1 3.7E-10 1.3E-14 123.0 16.1 122 581-717 112-242 (401)
358 1r5m_A SIR4-interacting protei 99.1 2.1E-10 7.1E-15 124.0 13.5 106 607-716 45-173 (425)
359 2oit_A Nucleoporin 214KDA; NH2 99.1 1.7E-10 5.8E-15 128.0 12.6 96 603-707 145-255 (434)
360 3odt_A Protein DOA1; ubiquitin 99.1 2.8E-10 9.5E-15 117.9 13.5 97 606-714 183-287 (313)
361 4gga_A P55CDC, cell division c 99.1 3.4E-10 1.2E-14 124.1 14.4 106 603-717 272-389 (420)
362 4ggc_A P55CDC, cell division c 99.1 6.7E-10 2.3E-14 115.4 15.6 115 603-717 146-309 (318)
363 3v7d_B Cell division control p 99.1 3.1E-10 1.1E-14 125.5 13.8 115 581-711 289-410 (464)
364 2vdu_B TRNA (guanine-N(7)-)-me 99.1 2.6E-10 8.7E-15 126.4 12.5 106 603-717 98-223 (450)
365 3odt_A Protein DOA1; ubiquitin 99.1 6.5E-10 2.2E-14 115.1 14.4 110 590-715 6-125 (313)
366 3gre_A Serine/threonine-protei 99.1 5.8E-10 2E-14 122.3 14.8 102 606-716 167-285 (437)
367 3jro_A Fusion protein of prote 99.1 2.2E-10 7.6E-15 136.0 12.1 124 581-715 30-181 (753)
368 3v7d_B Cell division control p 99.1 5.9E-10 2E-14 123.3 13.8 101 605-717 119-230 (464)
369 2w18_A PALB2, fancn, partner a 99.1 3E-10 1E-14 120.8 10.8 97 607-709 111-243 (356)
370 4ggc_A P55CDC, cell division c 99.1 1.4E-09 4.8E-14 112.9 15.4 122 581-716 44-174 (318)
371 1sq9_A Antiviral protein SKI8; 99.1 8E-10 2.8E-14 119.0 13.7 103 605-717 184-316 (397)
372 4a11_B DNA excision repair pro 99.0 1.4E-09 4.9E-14 116.8 15.0 105 603-715 95-210 (408)
373 1yfq_A Cell cycle arrest prote 99.0 2.4E-10 8.1E-15 120.3 8.4 97 605-713 54-169 (342)
374 2ovr_B FBW7, F-BOX/WD repeat p 99.0 1.7E-09 5.9E-14 119.2 14.8 116 581-714 298-429 (445)
375 1l0q_A Surface layer protein; 99.0 2.2E-09 7.6E-14 115.5 15.0 118 583-714 13-138 (391)
376 1pgu_A Actin interacting prote 99.0 3.3E-09 1.1E-13 120.9 15.6 118 581-714 182-319 (615)
377 1p22_A F-BOX/WD-repeat protein 98.9 5.3E-09 1.8E-13 115.1 14.8 96 605-715 131-234 (435)
378 1p22_A F-BOX/WD-repeat protein 98.9 7.4E-09 2.5E-13 113.9 15.0 98 603-715 252-357 (435)
379 2ovr_B FBW7, F-BOX/WD repeat p 98.9 6.2E-09 2.1E-13 114.7 14.4 115 580-714 137-259 (445)
380 4gyi_A RIO2 kinase; protein ki 98.9 1.2E-10 3.9E-15 126.3 0.3 67 97-170 187-264 (397)
381 3bws_A Protein LP49; two-domai 98.9 3.3E-09 1.1E-13 115.8 11.9 120 585-712 147-273 (433)
382 1l0q_A Surface layer protein; 98.9 1.3E-08 4.5E-13 109.4 15.6 120 581-714 53-180 (391)
383 2hqs_A Protein TOLB; TOLB, PAL 98.8 1.4E-08 4.8E-13 111.6 13.2 100 605-713 176-287 (415)
384 3bws_A Protein LP49; two-domai 98.7 1E-07 3.6E-12 103.8 15.1 119 582-714 191-325 (433)
385 2hqs_A Protein TOLB; TOLB, PAL 98.5 5.7E-07 2E-11 98.7 13.5 102 603-714 262-375 (415)
386 1nir_A Nitrite reductase; hemo 98.5 1.1E-06 3.8E-11 100.1 16.0 97 584-695 161-264 (543)
387 1k32_A Tricorn protease; prote 98.4 1.1E-06 3.8E-11 107.9 13.3 101 603-712 374-491 (1045)
388 1ri6_A Putative isomerase YBHE 98.4 8.7E-07 3E-11 92.5 10.1 106 591-709 27-145 (343)
389 2ojh_A Uncharacterized protein 98.3 2.4E-06 8.1E-11 86.6 12.2 100 608-713 129-237 (297)
390 3tm0_A Aminoglycoside 3'-phosp 98.3 3.8E-07 1.3E-11 93.3 5.6 95 64-168 56-211 (263)
391 2ojh_A Uncharacterized protein 98.3 1.1E-06 3.6E-11 89.2 8.9 104 603-714 168-293 (297)
392 1z68_A Fibroblast activation p 98.3 3.9E-07 1.3E-11 106.8 6.2 96 609-714 61-190 (719)
393 2ecf_A Dipeptidyl peptidase IV 98.3 1.6E-06 5.5E-11 101.8 11.2 108 607-716 36-175 (741)
394 1ri6_A Putative isomerase YBHE 98.3 4.3E-06 1.5E-10 87.2 12.3 111 591-713 73-199 (343)
395 3o4h_A Acylamino-acid-releasin 98.2 1.1E-06 3.7E-11 100.4 7.8 98 603-713 190-302 (582)
396 3hfq_A Uncharacterized protein 98.2 1.1E-05 3.7E-10 85.2 15.0 100 607-712 85-207 (347)
397 3o4h_A Acylamino-acid-releasin 98.2 1.4E-06 4.8E-11 99.5 7.7 94 611-714 153-267 (582)
398 3u4y_A Uncharacterized protein 98.2 1.1E-05 3.7E-10 84.2 13.9 116 586-710 112-239 (331)
399 1xfd_A DIP, dipeptidyl aminope 98.2 1.8E-06 6.1E-11 101.0 8.5 98 609-714 62-194 (723)
400 1nir_A Nitrite reductase; hemo 98.2 3.8E-06 1.3E-10 95.7 10.9 89 615-712 145-245 (543)
401 1xfd_A DIP, dipeptidyl aminope 98.2 7.7E-07 2.6E-11 104.1 4.9 98 609-716 18-137 (723)
402 1pby_B Quinohemoprotein amine 98.2 6E-06 2E-10 85.8 11.2 78 607-695 240-317 (337)
403 3dxp_A Putative acyl-COA dehyd 98.2 1.8E-06 6.2E-11 92.7 7.0 103 63-169 82-247 (359)
404 2ecf_A Dipeptidyl peptidase IV 98.2 3.2E-06 1.1E-10 99.1 9.6 99 608-714 109-230 (741)
405 2z3z_A Dipeptidyl aminopeptida 98.2 2.2E-06 7.5E-11 100.0 7.9 106 606-713 119-278 (706)
406 1z68_A Fibroblast activation p 98.1 9.5E-07 3.2E-11 103.5 4.7 96 611-716 19-133 (719)
407 3vgz_A Uncharacterized protein 98.1 1.5E-05 5.2E-10 83.6 13.5 111 590-710 214-332 (353)
408 3u4y_A Uncharacterized protein 98.1 1.6E-05 5.4E-10 83.0 13.4 113 586-712 24-148 (331)
409 1pby_B Quinohemoprotein amine 98.1 7.1E-06 2.4E-10 85.3 10.1 109 587-708 16-150 (337)
410 3vgz_A Uncharacterized protein 98.1 3.4E-05 1.2E-09 80.9 14.3 109 590-711 172-291 (353)
411 2bkl_A Prolyl endopeptidase; m 98.0 6.7E-06 2.3E-10 96.3 9.2 101 605-713 118-247 (695)
412 4a5s_A Dipeptidyl peptidase 4 98.0 6.9E-06 2.4E-10 96.9 8.6 121 585-715 39-193 (740)
413 1jmx_B Amine dehydrogenase; ox 98.0 1.8E-05 6E-10 82.8 10.6 78 607-695 254-332 (349)
414 1jmx_B Amine dehydrogenase; ox 98.0 1.5E-05 5E-10 83.4 9.9 92 612-711 4-110 (349)
415 2z3z_A Dipeptidyl aminopeptida 98.0 8.4E-06 2.9E-10 95.1 8.4 94 608-713 82-201 (706)
416 1xip_A Nucleoporin NUP159; bet 98.0 5.1E-05 1.7E-09 82.3 13.7 91 607-711 88-181 (388)
417 1k32_A Tricorn protease; prote 98.0 2E-05 6.7E-10 96.8 11.4 101 603-713 332-441 (1045)
418 3scy_A Hypothetical bacterial 97.9 6E-05 2E-09 80.0 13.2 106 606-712 153-279 (361)
419 2xdw_A Prolyl endopeptidase; a 97.9 2.7E-05 9.1E-10 91.4 10.7 97 607-712 124-252 (710)
420 3scy_A Hypothetical bacterial 97.9 8.7E-05 3E-09 78.7 13.4 91 606-701 257-360 (361)
421 4a5s_A Dipeptidyl peptidase 4 97.9 1.5E-05 5.2E-10 94.0 7.8 92 609-711 18-130 (740)
422 1nd4_A Aminoglycoside 3'-phosp 97.9 5.6E-06 1.9E-10 83.8 3.4 91 65-168 61-212 (264)
423 3azo_A Aminopeptidase; POP fam 97.9 3.4E-05 1.2E-09 89.2 10.2 105 606-713 128-262 (662)
424 3hfq_A Uncharacterized protein 97.8 0.00017 5.8E-09 75.9 14.2 81 608-694 240-325 (347)
425 2gop_A Trilobed protease; beta 97.7 0.00015 5.1E-09 76.1 11.8 94 608-712 59-189 (347)
426 1jof_A Carboxy-CIS,CIS-muconat 97.6 0.00048 1.6E-08 73.5 14.0 95 606-707 143-269 (365)
427 2oiz_A Aromatic amine dehydrog 97.6 0.0003 1E-08 75.3 11.9 81 613-704 259-359 (361)
428 1q7f_A NHL, brain tumor CG1071 97.5 0.00099 3.4E-08 67.9 14.7 93 607-710 163-268 (286)
429 3fvz_A Peptidyl-glycine alpha- 97.5 0.0011 3.6E-08 69.8 15.0 97 605-710 140-258 (329)
430 3pe7_A Oligogalacturonate lyas 97.5 0.0003 1E-08 74.9 10.8 73 612-693 40-116 (388)
431 2dg1_A DRP35, lactonase; beta 97.5 0.00085 2.9E-08 69.9 13.9 97 606-711 43-153 (333)
432 1yr2_A Prolyl oligopeptidase; 97.5 0.00018 6.1E-09 84.8 8.8 95 608-712 163-287 (741)
433 1jof_A Carboxy-CIS,CIS-muconat 97.4 0.00018 6.2E-09 76.8 7.4 94 608-708 40-160 (365)
434 1q7f_A NHL, brain tumor CG1071 97.4 0.0021 7.1E-08 65.4 14.6 103 601-713 23-141 (286)
435 3azo_A Aminopeptidase; POP fam 97.4 0.00039 1.3E-08 80.2 9.7 100 605-710 185-311 (662)
436 3sg8_A APH(2'')-ID; antibiotic 97.3 0.00015 5E-09 75.8 4.9 105 61-169 54-222 (304)
437 3fvz_A Peptidyl-glycine alpha- 97.3 0.0025 8.6E-08 66.8 14.5 98 607-714 195-313 (329)
438 3pe7_A Oligogalacturonate lyas 97.3 0.00078 2.7E-08 71.6 10.4 98 606-711 79-207 (388)
439 3e5z_A Putative gluconolactona 97.3 0.0013 4.5E-08 67.5 11.4 93 607-709 27-131 (296)
440 3c5m_A Oligogalacturonate lyas 97.2 0.00047 1.6E-08 73.3 8.2 91 594-693 22-116 (396)
441 1qks_A Cytochrome CD1 nitrite 97.2 0.0019 6.6E-08 73.6 13.2 93 589-696 184-283 (567)
442 3r70_A Aminoglycoside phosphot 97.2 0.00031 1.1E-08 74.0 5.8 95 63-168 73-235 (320)
443 3tdw_A Gentamicin resistance p 97.1 0.00084 2.9E-08 70.3 8.1 102 62-169 54-223 (306)
444 2yle_A Protein spire homolog 1 97.1 0.0019 6.4E-08 63.6 9.5 60 104-163 32-92 (229)
445 3c5m_A Oligogalacturonate lyas 97.0 0.0017 5.6E-08 69.0 9.9 93 609-712 239-370 (396)
446 1xip_A Nucleoporin NUP159; bet 97.0 0.0026 8.8E-08 68.9 11.4 86 607-708 126-229 (388)
447 2oiz_A Aromatic amine dehydrog 96.9 0.0013 4.6E-08 70.2 7.9 90 589-694 38-146 (361)
448 3iuj_A Prolyl endopeptidase; h 96.8 0.0026 8.9E-08 74.3 9.9 93 606-708 127-249 (693)
449 3dsm_A Uncharacterized protein 96.8 0.0059 2E-07 64.1 11.1 111 586-712 68-191 (328)
450 3e5z_A Putative gluconolactona 96.6 0.0078 2.7E-07 61.5 10.7 91 607-705 171-269 (296)
451 1rwi_B Serine/threonine-protei 96.6 0.016 5.5E-07 57.9 12.8 98 608-713 150-254 (270)
452 2gop_A Trilobed protease; beta 96.4 0.012 4.1E-07 61.3 10.9 91 608-713 15-124 (347)
453 2dg1_A DRP35, lactonase; beta 96.4 0.032 1.1E-06 57.8 13.9 99 607-711 86-201 (333)
454 3g4e_A Regucalcin; six bladed 96.3 0.022 7.6E-07 58.5 11.5 93 608-704 149-253 (297)
455 3sjl_D Methylamine dehydrogena 96.2 0.0096 3.3E-07 64.3 8.8 92 588-695 65-176 (386)
456 3no2_A Uncharacterized protein 96.2 0.02 6.8E-07 58.7 10.4 82 618-711 4-95 (276)
457 3no2_A Uncharacterized protein 96.1 0.03 1E-06 57.3 11.7 93 608-710 125-230 (276)
458 3dsm_A Uncharacterized protein 96.0 0.025 8.6E-07 59.2 10.8 103 591-710 161-285 (328)
459 1rwi_B Serine/threonine-protei 96.0 0.042 1.4E-06 54.7 11.8 98 608-713 108-212 (270)
460 1pjx_A Dfpase, DIISOPROPYLFLUO 95.9 0.032 1.1E-06 56.9 10.9 101 608-713 18-137 (314)
461 3ats_A Putative uncharacterize 95.9 0.0022 7.7E-08 68.2 1.8 30 140-169 222-251 (357)
462 2mad_H Methylamine dehydrogena 95.9 0.032 1.1E-06 59.8 10.8 86 610-703 269-365 (373)
463 3ovc_A Hygromycin-B 4-O-kinase 95.7 0.0048 1.6E-07 66.2 3.5 29 140-168 213-241 (362)
464 2qe8_A Uncharacterized protein 95.7 0.074 2.5E-06 55.8 12.5 87 605-693 64-159 (343)
465 4gkh_A Aminoglycoside 3'-phosp 95.6 0.013 4.6E-07 59.3 6.0 94 66-168 68-221 (272)
466 1qks_A Cytochrome CD1 nitrite 95.5 0.052 1.8E-06 61.8 11.3 83 615-706 163-257 (567)
467 3hrp_A Uncharacterized protein 95.5 0.12 4.1E-06 56.0 13.6 92 608-709 131-236 (409)
468 1mda_H Methylamine dehydrogena 95.4 0.037 1.3E-06 59.3 8.9 75 613-695 269-353 (368)
469 2z2n_A Virginiamycin B lyase; 95.3 0.33 1.1E-05 48.6 15.4 97 606-712 13-118 (299)
470 2mad_H Methylamine dehydrogena 95.3 0.092 3.1E-06 56.2 11.7 90 588-694 53-162 (373)
471 2z2n_A Virginiamycin B lyase; 95.2 0.33 1.1E-05 48.5 15.3 95 607-711 56-159 (299)
472 1pjx_A Dfpase, DIISOPROPYLFLUO 95.2 0.093 3.2E-06 53.4 10.9 74 608-689 226-300 (314)
473 2bkl_A Prolyl endopeptidase; m 95.1 0.13 4.4E-06 59.7 13.1 95 606-711 225-337 (695)
474 2xdw_A Prolyl endopeptidase; a 95.1 0.12 4.2E-06 60.0 12.9 106 606-713 231-356 (710)
475 3g4e_A Regucalcin; six bladed 94.9 0.29 1E-05 49.9 13.9 93 607-711 12-116 (297)
476 2iwa_A Glutamine cyclotransfer 94.6 0.27 9.2E-06 50.1 12.4 92 590-695 7-102 (266)
477 2ghs_A AGR_C_1268P; regucalcin 94.6 0.22 7.5E-06 51.8 12.1 92 608-711 49-152 (326)
478 3dr2_A Exported gluconolactona 94.5 0.3 1E-05 50.0 12.7 92 607-709 44-147 (305)
479 2ghs_A AGR_C_1268P; regucalcin 94.4 0.48 1.6E-05 49.2 14.2 93 608-704 179-283 (326)
480 3nol_A Glutamine cyclotransfer 94.1 0.66 2.3E-05 46.9 13.9 91 590-695 29-123 (262)
481 3c75_H MADH, methylamine dehyd 94.1 0.14 4.9E-06 55.9 9.6 92 588-695 105-216 (426)
482 2q83_A YTAA protein; 2635576, 94.1 0.055 1.9E-06 56.5 6.2 29 140-168 222-250 (346)
483 2qc5_A Streptogramin B lactona 94.0 0.99 3.4E-05 45.0 15.4 95 607-711 19-122 (300)
484 2qe8_A Uncharacterized protein 94.0 0.23 7.9E-06 52.0 10.9 101 609-711 196-309 (343)
485 3c75_H MADH, methylamine dehyd 93.6 0.093 3.2E-06 57.3 7.0 84 612-703 323-417 (426)
486 2xe4_A Oligopeptidase B; hydro 93.2 0.18 6.1E-06 59.3 9.1 92 609-710 175-288 (751)
487 2qc5_A Streptogramin B lactona 92.8 2 6.9E-05 42.6 15.2 95 607-711 61-164 (300)
488 1yr2_A Prolyl oligopeptidase; 92.7 0.14 4.9E-06 59.8 7.3 55 658-714 164-229 (741)
489 3hrp_A Uncharacterized protein 92.7 0.49 1.7E-05 51.1 10.9 94 613-713 176-288 (409)
490 3mbr_X Glutamine cyclotransfer 92.5 2.2 7.5E-05 42.6 14.6 90 591-695 8-101 (243)
491 3nok_A Glutaminyl cyclase; bet 92.5 1.7 5.6E-05 44.1 13.7 90 591-695 42-132 (268)
492 1kb0_A Quinohemoprotein alcoho 92.4 0.2 6.8E-06 58.2 7.8 58 629-695 457-514 (677)
493 2hz6_A Endoplasmic reticulum t 92.3 0.089 3E-06 56.1 4.4 67 618-694 8-74 (369)
494 3dr2_A Exported gluconolactona 92.2 0.59 2E-05 47.7 10.4 92 608-710 131-256 (305)
495 1mda_H Methylamine dehydrogena 92.0 0.19 6.5E-06 53.8 6.4 85 588-688 52-158 (368)
496 3sjl_D Methylamine dehydrogena 91.7 0.4 1.4E-05 51.5 8.6 77 611-695 283-370 (386)
497 2p4o_A Hypothetical protein; p 91.4 5.4 0.00018 40.5 16.7 88 589-692 19-108 (306)
498 1yiq_A Quinohemoprotein alcoho 91.3 0.25 8.6E-06 57.4 7.1 58 628-694 454-511 (689)
499 2pyw_A Uncharacterized protein 90.9 0.14 4.6E-06 55.7 4.0 30 138-168 230-259 (420)
500 1fwx_A Nitrous oxide reductase 89.7 0.54 1.9E-05 53.1 7.6 79 609-688 278-361 (595)
No 1
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=1.2e-45 Score=388.94 Aligned_cols=211 Identities=14% Similarity=0.149 Sum_probs=173.0
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|+.+|++++|||||++++++.........+|+|||| .||+|.++|.+.+ .+++.+++.|++||+.||+|||++|
T Consensus 71 ~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvmEy~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~ylH~~~ 149 (290)
T 3fpq_A 71 RFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFK-VMKIKVLRSWCRQILKGLQFLHTRT 149 (290)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHTSS
T ss_pred HHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEEeCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 4558899999999999999999433322333468999999 8999999996543 4999999999999999999999998
Q ss_pred --ceeccCCCCcEEEc-cCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCC
Q 004989 142 --IVVHNVRPSCFVMS-SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 142 --IvHrDLKP~NILl~-~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
||||||||+||||+ .+|.+||+|||+|+.....
T Consensus 150 ~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~~-------------------------------------------- 185 (290)
T 3fpq_A 150 PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS-------------------------------------------- 185 (290)
T ss_dssp SCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCTT--------------------------------------------
T ss_pred CCEEecccChhheeEECCCCCEEEEeCcCCEeCCCC--------------------------------------------
Confidence 99999999999998 4789999888887321000
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhh
Q 004989 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
.....+||+.|||||++.+ .|+.++||||||
T Consensus 186 ------------------------------------------------~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlG 216 (290)
T 3fpq_A 186 ------------------------------------------------FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFG 216 (290)
T ss_dssp ------------------------------------------------SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHH
T ss_pred ------------------------------------------------ccCCcccCccccCHHHcCC-CCCcHHHHHHHH
Confidence 0012579999999999976 499999999999
Q ss_pred chhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 299 VLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|+||||+| ||.........+..+.....|+.+....+ ...+||.+||++||++|||+.|+|+||||++.
T Consensus 217 vilyelltg~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~Hp~~~~~ 289 (290)
T 3fpq_A 217 MCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQEE 289 (290)
T ss_dssp HHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC--
T ss_pred HHHHHHHHCCCCCCCCCcHHHHHHHHHcCCCCCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcCccccCC
Confidence 99999999 78766666677777777777776665554 45599999999999999999999999999863
No 2
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=1.1e-45 Score=391.84 Aligned_cols=246 Identities=24% Similarity=0.348 Sum_probs=183.9
Q ss_pred CCCcccccccccCCCCccchhhchhhhhhcccCCCCCceecccceeecCC--------CCCcEEEEEec-CCCCHHHHHh
Q 004989 42 PRLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEA--------AIDPFVHAIEW-GDVSLRQWLD 112 (720)
Q Consensus 42 ~~~~~~~r~~~~~~~~~~~~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~--------~~~~~~lv~E~-~ggsL~~~L~ 112 (720)
.+.++++++.... .....-+..+|..+|++++|||||++++++...+. ...++|+|||| .|++|.++|.
T Consensus 30 ~~~vAiK~i~~~~--~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~~~~~l~ivmE~~~gg~L~~~l~ 107 (299)
T 4g31_A 30 DCNYAIKRIRLPN--RELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMN 107 (299)
T ss_dssp CCEEEEEEEEECS--SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC----------CEEEEEEEECCCSCCHHHHHH
T ss_pred CCEEEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccCCCcEEEEEEecCCCCcHHHHHH
Confidence 4455556554332 12222344588999999999999999995443332 12247999999 8999999996
Q ss_pred CCCC--CCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCC
Q 004989 113 KPKR--SVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDL 190 (720)
Q Consensus 113 ~~~~--~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~ 190 (720)
.... ..++..++.|+.||+.||+|||++|||||||||+||||+.++.+||+|||+|+..........
T Consensus 108 ~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~~~~~vKl~DFGla~~~~~~~~~~~----------- 176 (299)
T 4g31_A 108 GRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQT----------- 176 (299)
T ss_dssp TCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCCCC----------------------
T ss_pred hcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEECCCCcEEEccCccceecCCCccccc-----------
Confidence 5432 245677999999999999999999999999999999999999999999999865432211000
Q ss_pred CCCCchhhhhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccc
Q 004989 191 SSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQIL 270 (720)
Q Consensus 191 ~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~ 270 (720)
.. . ........+.
T Consensus 177 ------------------~~--~-----------------------------------------------~~~~~~~~~~ 189 (299)
T 4g31_A 177 ------------------VL--T-----------------------------------------------PMPAYARHTG 189 (299)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ------------------cc--c-----------------------------------------------ccccccccCC
Confidence 00 0 0000001122
Q ss_pred cccCCcccCcccccCCCCCccccchhhhchhhhccccCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCC
Q 004989 271 LMETNWYASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPS 350 (720)
Q Consensus 271 ~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLltpf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~ 350 (720)
.+||+.|||||++.+..|+.++|||||||+||||++||....+....+..+....+|+.+....|...+||.+||++||.
T Consensus 190 ~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~Pf~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~~L~~dP~ 269 (299)
T 4g31_A 190 QVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLYPFSTQMERVRTLTDVRNLKFPPLFTQKYPCEYVMVQDMLSPSPM 269 (299)
T ss_dssp --CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHSCCSSHHHHHHHHHHHHTTCCCHHHHHHCHHHHHHHHHHTCSSGG
T ss_pred cccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHccCCCCccHHHHHHHHHhcCCCCCCCcccCHHHHHHHHHHcCCChh
Confidence 58999999999999999999999999999999999999876666667777777888887777788888999999999999
Q ss_pred CCCChHHHHcCcccCCC
Q 004989 351 GRPKMGELLQSEFLNEP 367 (720)
Q Consensus 351 ~Rpta~eiL~hp~~~~~ 367 (720)
+|||+.|+|+||||++.
T Consensus 270 ~Rps~~eil~h~~~~~~ 286 (299)
T 4g31_A 270 ERPEAINIIENAVFEDL 286 (299)
T ss_dssp GSCCHHHHHTSGGGCCC
T ss_pred HCcCHHHHhcCHhhCCC
Confidence 99999999999999876
No 3
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=9.4e-45 Score=389.97 Aligned_cols=239 Identities=15% Similarity=0.260 Sum_probs=184.7
Q ss_pred cccccccccC-------CCCCCcccccccccCCCCccchhhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec
Q 004989 30 RALNISGVSD-------RNPRLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW 102 (720)
Q Consensus 30 ~~~~~~~~~~-------~~~~~~~~~r~~~~~~~~~~~~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~ 102 (720)
+.+|.++++. .+.+.++++++...... ..-+..+|+.+|++++|||||++++ +++++. .+|+||||
T Consensus 80 ~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~---~~~~~~~Ei~il~~l~HpnIV~l~~-~~~~~~---~~~ivmEy 152 (346)
T 4fih_A 80 IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ---RRELLFNEVVIMRDYQHENVVEMYN-SYLVGD---ELWVVMEF 152 (346)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCS---SGGGGHHHHHHHHHCCCTTBCCEEE-EEEETT---EEEEEECC
T ss_pred EEeecCcCeEEEEEEECCCCCEEEEEEEecCchh---HHHHHHHHHHHHHhCCCCCCCcEEE-EEEECC---EEEEEEeC
Confidence 3455555544 34455666666544322 1223347888999999999999999 565554 68999999
Q ss_pred -CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccc
Q 004989 103 -GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLN 181 (720)
Q Consensus 103 -~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~ 181 (720)
.||+|.+++.+. .+++.+++.|++||+.||+|||++|||||||||+||||+.+|++||+|||+|+......
T Consensus 153 ~~gg~L~~~l~~~--~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~------ 224 (346)
T 4fih_A 153 LEGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV------ 224 (346)
T ss_dssp CTTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSS------
T ss_pred CCCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEECCCCCEEEecCcCceecCCCC------
Confidence 899999999653 39999999999999999999999999999999999999999999999998884331110
Q ss_pred cccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhccc
Q 004989 182 TQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKK 261 (720)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~ 261 (720)
+
T Consensus 225 ---------------------------~---------------------------------------------------- 225 (346)
T 4fih_A 225 ---------------------------P---------------------------------------------------- 225 (346)
T ss_dssp ---------------------------C----------------------------------------------------
T ss_pred ---------------------------C----------------------------------------------------
Confidence 0
Q ss_pred CCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhccc---cCCCCchHHHHHHHhhcCCCC-ccccc-cCch
Q 004989 262 QPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLP-PQLLL-KFPK 336 (720)
Q Consensus 262 ~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p-~~~~~-~~p~ 336 (720)
.....+||++|||||++.+..|+.++|||||||+||||++ ||...... ..+..+.....+ ..... ..+.
T Consensus 226 -----~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~-~~~~~i~~~~~~~~~~~~~~s~~ 299 (346)
T 4fih_A 226 -----RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL-KAMKMIRDNLPPRLKNLHKVSPS 299 (346)
T ss_dssp -----CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-HHHHHHHHSSCCCCSCGGGSCHH
T ss_pred -----cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH-HHHHHHHcCCCCCCCccccCCHH
Confidence 0012589999999999999999999999999999999999 77665544 445555544322 22223 3445
Q ss_pred HHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004989 337 EASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 337 ~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
..+||.+||.+||++|||+.|+|+||||++..
T Consensus 300 ~~dli~~~L~~dP~~R~ta~e~l~Hp~~~~~~ 331 (346)
T 4fih_A 300 LKGFLDRLLVRDPAQRATAAELLKHPFLAKAG 331 (346)
T ss_dssp HHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCC
T ss_pred HHHHHHHHcCCChhHCcCHHHHhcCHhhcCCC
Confidence 56999999999999999999999999998763
No 4
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=4.8e-45 Score=381.11 Aligned_cols=227 Identities=17% Similarity=0.233 Sum_probs=170.2
Q ss_pred CCCcccccccccCCCCccchhhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHH
Q 004989 42 PRLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVY 121 (720)
Q Consensus 42 ~~~~~~~r~~~~~~~~~~~~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~ 121 (720)
.+.++++.+............+..+|..+|++++|||||++++ ++++.. .+|+||||.+|+|.++|.+.+ .+++.
T Consensus 38 ~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~-~~~~~~---~~~ivmEy~~g~L~~~l~~~~-~l~e~ 112 (275)
T 3hyh_A 38 GQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD-VIKSKD---EIIMVIEYAGNELFDYIVQRD-KMSEQ 112 (275)
T ss_dssp CCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEE-EEECSS---EEEEEEECCCEEHHHHHHHSC-SCCHH
T ss_pred CCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEE-EEEECC---EEEEEEeCCCCCHHHHHHHcC-CCCHH
Confidence 3444555443332222333345568889999999999999999 666554 689999998889999996554 49999
Q ss_pred HHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhh
Q 004989 122 ECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQR 201 (720)
Q Consensus 122 ~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (720)
+++.|++||+.||+|||++|||||||||+|||++.++++||+|||+|+......
T Consensus 113 ~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~-------------------------- 166 (275)
T 3hyh_A 113 EARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN-------------------------- 166 (275)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTCCEEECCSSCC---------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHCCcccccCChHHeEECCCCCEEEeecCCCeecCCCC--------------------------
Confidence 999999999999999999999999999999999999999999988874321100
Q ss_pred hhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcc
Q 004989 202 RTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPE 281 (720)
Q Consensus 202 r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE 281 (720)
.....+||+.|||||
T Consensus 167 -----------------------------------------------------------------~~~~~~GT~~Y~APE 181 (275)
T 3hyh_A 167 -----------------------------------------------------------------FLKTSCGSPNYAAPE 181 (275)
T ss_dssp -------------------------------------------------------------------------CTTSCHH
T ss_pred -----------------------------------------------------------------ccCCeeECcccCChh
Confidence 001147999999999
Q ss_pred cccCCCC-Cccccchhhhchhhhccc---cCCCCchHHHHHHHhhcCCCCcccccc-CchHHHHHHHcCCCCCCCCCChH
Q 004989 282 ELAGAPV-SCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLK-FPKEASFCLWLLHPEPSGRPKMG 356 (720)
Q Consensus 282 ~l~~~~~-s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~-~p~~~~Li~~~L~~dP~~Rpta~ 356 (720)
++.+..| ++++|||||||++|||++ ||...... ..+..+....++ ++.. .+...+||.+||++||++|||++
T Consensus 182 ~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~-~~~~~i~~~~~~--~p~~~s~~~~~li~~~L~~dP~~R~s~~ 258 (275)
T 3hyh_A 182 VISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP-VLFKNISNGVYT--LPKFLSPGAAGLIKRMLIVNPLNRISIH 258 (275)
T ss_dssp HHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHTCCC--CCTTSCHHHHHHHHHHSCSSGGGSCCHH
T ss_pred hhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHH-HHHHHHHcCCCC--CCCCCCHHHHHHHHHHccCChhHCcCHH
Confidence 9998886 689999999999999999 77665443 455555554332 2223 34556999999999999999999
Q ss_pred HHHcCcccCCC
Q 004989 357 ELLQSEFLNEP 367 (720)
Q Consensus 357 eiL~hp~~~~~ 367 (720)
|+|+||||+..
T Consensus 259 eil~hpw~k~~ 269 (275)
T 3hyh_A 259 EIMQDDWFKVD 269 (275)
T ss_dssp HHHHCHHHHTT
T ss_pred HHHcCcccccC
Confidence 99999999754
No 5
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=4.4e-45 Score=393.15 Aligned_cols=243 Identities=17% Similarity=0.213 Sum_probs=184.5
Q ss_pred CcccccccccC-------CCCCCcccccccccCCCCccchhhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEe
Q 004989 29 SRALNISGVSD-------RNPRLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIE 101 (720)
Q Consensus 29 ~~~~~~~~~~~-------~~~~~~~~~r~~~~~~~~~~~~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E 101 (720)
.+.+|.++++. .+.+.++++.+..... ......+..+|+.+|++++|||||++++ +++++. .+|+|||
T Consensus 29 ~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~-~~~~~~~~~~E~~il~~l~HpnIV~~~~-~~~~~~---~~yiVmE 103 (350)
T 4b9d_A 29 LQKIGEGSFGKAILVKSTEDGRQYVIKEINISRM-SSKEREESRREVAVLANMKHPNIVQYRE-SFEENG---SLYIVMD 103 (350)
T ss_dssp EEEC------CEEEEEETTTCCEEEEEEEECTTS-CHHHHHHHHHHHHHHHHCCCTTBCCEEE-EEEETT---EEEEEEE
T ss_pred eEEEecCCCeEEEEEEECCCCCEEEEEEEehHHC-CHHHHHHHHHHHHHHHHCCCCCCCcEEE-EEEECC---EEEEEEe
Confidence 44555555554 3345555555543322 2222334558999999999999999999 555543 6899999
Q ss_pred c-CCCCHHHHHh-CCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccc
Q 004989 102 W-GDVSLRQWLD-KPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEG 179 (720)
Q Consensus 102 ~-~ggsL~~~L~-~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~ 179 (720)
| .||+|.++|. +.+..+++.+++.|+.||+.||+|||++|||||||||+||||+.+|++||+|||+|+......
T Consensus 104 y~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~---- 179 (350)
T 4b9d_A 104 YCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTV---- 179 (350)
T ss_dssp CCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHH----
T ss_pred CCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCCEEEcccccceeecCCc----
Confidence 9 8999999994 344558999999999999999999999999999999999999999999999888884321000
Q ss_pred cccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhc
Q 004989 180 LNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEE 259 (720)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~ 259 (720)
.
T Consensus 180 -----------------------------~-------------------------------------------------- 180 (350)
T 4b9d_A 180 -----------------------------E-------------------------------------------------- 180 (350)
T ss_dssp -----------------------------H--------------------------------------------------
T ss_pred -----------------------------c--------------------------------------------------
Confidence 0
Q ss_pred ccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCch
Q 004989 260 KKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPK 336 (720)
Q Consensus 260 ~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~ 336 (720)
.....+||+.|||||++.+..|+.++|||||||+||||++ ||...... ..+..+....+|+......+.
T Consensus 181 -------~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~-~~~~~i~~~~~~~~~~~~s~~ 252 (350)
T 4b9d_A 181 -------LARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMK-NLVLKIISGSFPPVSLHYSYD 252 (350)
T ss_dssp -------HHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHTCCCCCCTTSCHH
T ss_pred -------cccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH-HHHHHHHcCCCCCCCccCCHH
Confidence 0012579999999999999999999999999999999999 78766554 445555555555443334445
Q ss_pred HHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 337 EASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 337 ~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
..+||.+||++||++|||+.|+|+||||+..
T Consensus 253 ~~~li~~~L~~dP~~R~s~~e~l~hp~~~~~ 283 (350)
T 4b9d_A 253 LRSLVSQLFKRNPRDRPSVNSILEKGFIAKR 283 (350)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHTSHHHHTT
T ss_pred HHHHHHHHccCChhHCcCHHHHhcCHHhhcC
Confidence 5699999999999999999999999999865
No 6
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=3.1e-45 Score=388.13 Aligned_cols=244 Identities=17% Similarity=0.210 Sum_probs=184.5
Q ss_pred CCcccccccccC-------CCCCCcccccccccCCCCccchhhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEE
Q 004989 28 SSRALNISGVSD-------RNPRLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAI 100 (720)
Q Consensus 28 ~~~~~~~~~~~~-------~~~~~~~~~r~~~~~~~~~~~~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~ 100 (720)
..+.+|.++++. .+.+.++++.+...........-+..+|..+|++++|||||++++ +++++. .+|+||
T Consensus 36 i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~-~~~~~~---~~yivm 111 (311)
T 4aw0_A 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF-TFQDDE---KLYFGL 111 (311)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEE-EEECSS---EEEEEE
T ss_pred EEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEE-EEEeCC---EEEEEE
Confidence 345566666654 333444444443221111222334457888999999999999999 666654 689999
Q ss_pred ec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccc
Q 004989 101 EW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEG 179 (720)
Q Consensus 101 E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~ 179 (720)
|| .||+|.++|.+.+ .+++.+++.|+.||+.||+|||++|||||||||+||||+.+|++||+|||+|+........
T Consensus 112 Ey~~gG~L~~~i~~~~-~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~-- 188 (311)
T 4aw0_A 112 SYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ-- 188 (311)
T ss_dssp CCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTC--
T ss_pred ecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCc--
Confidence 99 8999999996544 4999999999999999999999999999999999999999999999999988543211000
Q ss_pred cccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhc
Q 004989 180 LNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEE 259 (720)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~ 259 (720)
T Consensus 189 -------------------------------------------------------------------------------- 188 (311)
T 4aw0_A 189 -------------------------------------------------------------------------------- 188 (311)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhccc---cCCCCchHHHHHHHhhcCCCCccccc-cCc
Q 004989 260 KKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL-KFP 335 (720)
Q Consensus 260 ~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~-~~p 335 (720)
......+||+.|||||++.+..|+.++|||||||+||||++ ||...+.. ..+..+.+..+. ++. .++
T Consensus 189 ------~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~-~~~~~i~~~~~~--~p~~~s~ 259 (311)
T 4aw0_A 189 ------ARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEG-LIFAKIIKLEYD--FPEKFFP 259 (311)
T ss_dssp ------CCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHTCCC--CCTTCCH
T ss_pred ------ccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHcCCCC--CCcccCH
Confidence 00112589999999999999999999999999999999999 77765544 444445443321 222 344
Q ss_pred hHHHHHHHcCCCCCCCCCChHH------HHcCcccCCC
Q 004989 336 KEASFCLWLLHPEPSGRPKMGE------LLQSEFLNEP 367 (720)
Q Consensus 336 ~~~~Li~~~L~~dP~~Rpta~e------iL~hp~~~~~ 367 (720)
...+||.+||.+||++|||++| |++||||+..
T Consensus 260 ~~~dli~~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~~i 297 (311)
T 4aw0_A 260 KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 297 (311)
T ss_dssp HHHHHHHHHSCSSGGGSTTSGGGTCHHHHHTSGGGTTC
T ss_pred HHHHHHHHHccCCHhHCcChHHHcCCHHHHCCCCcCCC
Confidence 5569999999999999999988 5899999986
No 7
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=9.8e-44 Score=391.29 Aligned_cols=240 Identities=16% Similarity=0.262 Sum_probs=184.9
Q ss_pred CcccccccccC-------CCCCCcccccccccCCCCccchhhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEe
Q 004989 29 SRALNISGVSD-------RNPRLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIE 101 (720)
Q Consensus 29 ~~~~~~~~~~~-------~~~~~~~~~r~~~~~~~~~~~~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E 101 (720)
.+.+|.|+++. .+.+.++++++...... ..-+..+|+.+|++++|||||++|+ +++++. .+|+|||
T Consensus 156 ~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~---~~~~~~~Ei~il~~l~HpnIV~l~~-~~~~~~---~~~iVmE 228 (423)
T 4fie_A 156 FIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ---RRELLFNEVVIMRDYQHENVVEMYN-SYLVGD---ELWVVME 228 (423)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCS---SGGGHHHHHHHHHHCCCTTBCCEEE-EEEETT---EEEEEEE
T ss_pred eeEeccCcCcEEEEEEECCCCCEEEEEEEeccchh---HHHHHHHHHHHHHhCCCCCCCceEE-EEEECC---EEEEEEe
Confidence 44555555554 33455666665543322 2223447888999999999999999 565554 6899999
Q ss_pred c-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCccccc
Q 004989 102 W-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGL 180 (720)
Q Consensus 102 ~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~ 180 (720)
| .||+|.+++... .+++.+++.|++||+.||+|||++|||||||||+||||+.+|++||+|||+|+......
T Consensus 229 y~~gG~L~~~i~~~--~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~----- 301 (423)
T 4fie_A 229 FLEGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV----- 301 (423)
T ss_dssp CCTTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSC-----
T ss_pred CCCCCcHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEecCccceECCCCC-----
Confidence 9 899999999543 39999999999999999999999999999999999999999999999999884331110
Q ss_pred ccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcc
Q 004989 181 NTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEK 260 (720)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~ 260 (720)
.
T Consensus 302 ----------------------------~--------------------------------------------------- 302 (423)
T 4fie_A 302 ----------------------------P--------------------------------------------------- 302 (423)
T ss_dssp ----------------------------C---------------------------------------------------
T ss_pred ----------------------------c---------------------------------------------------
Confidence 0
Q ss_pred cCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhccc---cCCCCchHHHHHHHhhcCCCC-cccccc-Cc
Q 004989 261 KQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLP-PQLLLK-FP 335 (720)
Q Consensus 261 ~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p-~~~~~~-~p 335 (720)
.....+||++|||||++.+..|+.++|||||||++|||++ ||...... ..+..+.....+ ...... .+
T Consensus 303 ------~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~-~~~~~i~~~~~~~~~~~~~~s~ 375 (423)
T 4fie_A 303 ------RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL-KAMKMIRDNLPPRLKNLHKVSP 375 (423)
T ss_dssp ------CBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-HHHHHHHHSCCCCCSCTTSSCH
T ss_pred ------cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH-HHHHHHHcCCCCCCcccccCCH
Confidence 0012589999999999999999999999999999999999 77665544 445555544322 122223 34
Q ss_pred hHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004989 336 KEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 336 ~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
...+||.+||.+||.+|||+.|+|+||||+...
T Consensus 376 ~~~dli~~~L~~dP~~R~ta~ell~Hp~~~~~~ 408 (423)
T 4fie_A 376 SLKGFLDRLLVRDPAQRATAAELLKHPFLAKAG 408 (423)
T ss_dssp HHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCC
T ss_pred HHHHHHHHHcCCChhHCcCHHHHhcCHHhcCCC
Confidence 556999999999999999999999999998763
No 8
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=1.4e-44 Score=382.83 Aligned_cols=210 Identities=18% Similarity=0.241 Sum_probs=165.6
Q ss_pred hhhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004989 61 ELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 61 ~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
..+..+|..+|++++|||||++++ +++++. .+|+|||| .||+|.++|.+.+ .+++.+++.|++||+.||+|||+
T Consensus 70 ~~~~~~E~~il~~l~HpnIv~l~~-~~~~~~---~~~ivmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~ylH~ 144 (304)
T 3ubd_A 70 RVRTKMERDILVEVNHPFIVKLHY-AFQTEG---KLYLILDFLRGGDLFTRLSKEV-MFTEEDVKFYLAELALALDHLHS 144 (304)
T ss_dssp CC------CCCCCCCCTTEECEEE-EEEETT---EEEEEECCCTTCEEHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCCCCeEEE-EEEECC---EEEEEEEcCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHH
Confidence 335567888999999999999999 665553 68999999 8999999996544 49999999999999999999999
Q ss_pred CCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCC
Q 004989 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+|||||||||+|||++.+|++||+|||+|+......
T Consensus 145 ~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~-------------------------------------------- 180 (304)
T 3ubd_A 145 LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE-------------------------------------------- 180 (304)
T ss_dssp TTCCCSSCCGGGEEECTTSCEEEESSEEEEC-------------------------------------------------
T ss_pred CCCcCCCCCHHHeEEcCCCCEEecccccceeccCCC--------------------------------------------
Confidence 999999999999999999999999988884321100
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhc
Q 004989 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
......+||+.|||||++.+..|+.++|||||||
T Consensus 181 ----------------------------------------------~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGv 214 (304)
T 3ubd_A 181 ----------------------------------------------KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGV 214 (304)
T ss_dssp ----------------------------------------------CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHH
T ss_pred ----------------------------------------------ccccccccCcccCCHHHhccCCCCCCCcccchHH
Confidence 0001257999999999999999999999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCCh-----HHHHcCcccCCC
Q 004989 300 LLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM-----GELLQSEFLNEP 367 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta-----~eiL~hp~~~~~ 367 (720)
+||||++ ||.+.+.. ..+..+.+..++. .....+...+||.+||++||++|||+ +|+++||||+..
T Consensus 215 ilyemltG~~PF~~~~~~-~~~~~i~~~~~~~-p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~Hp~f~~i 288 (304)
T 3ubd_A 215 LMFEMLTGTLPFQGKDRK-ETMTMILKAKLGM-PQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTI 288 (304)
T ss_dssp HHHHHHHSSCSSCCSSHH-HHHHHHHHCCCCC-CTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTSGGGTTC
T ss_pred HHHHHHhCCCCCCCcCHH-HHHHHHHcCCCCC-CCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcCccccCC
Confidence 9999999 78766554 4444444433221 11233455699999999999999984 799999999986
No 9
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=3.5e-44 Score=384.36 Aligned_cols=215 Identities=16% Similarity=0.101 Sum_probs=167.5
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..+|++++|||||++|+ +++++. .+|+|||| .||+|.++|++.+ .+++.+++.|+.||+.||+|||++|||
T Consensus 98 ~~E~~il~~l~HpnIV~l~~-~~~~~~---~~~ivmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~ylH~~~Ii 172 (336)
T 4g3f_A 98 VEELVACAGLSSPRIVPLYG-AVREGP---WVNIFMELLEGGSLGQLIKQMG-CLPEDRALYYLGQALEGLEYLHTRRIL 172 (336)
T ss_dssp THHHHTTTTCCCTTBCCEEE-EEEETT---EEEEEECCCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHTTTEE
T ss_pred HHHHHHHHhCCCCCCCcEEE-EEEECC---EEEEEEeccCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCce
Confidence 46888999999999999999 565553 68999999 8999999996544 499999999999999999999999999
Q ss_pred eccCCCCcEEEccCC-ceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 144 VHNVRPSCFVMSSFN-HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 144 HrDLKP~NILl~~~~-~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
||||||+||||+.+| ++||+|||+|+........ +
T Consensus 173 HRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~------------------------------------~-------- 208 (336)
T 4g3f_A 173 HGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLG------------------------------------K-------- 208 (336)
T ss_dssp CSCCCGGGEEECTTSCCEEECCCTTCEEC---------------------------------------------------
T ss_pred ecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcc------------------------------------c--------
Confidence 999999999999887 6999999988543221000 0
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
........+||+.|||||++.+..|+.++|||||||+||
T Consensus 209 -----------------------------------------~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvily 247 (336)
T 4g3f_A 209 -----------------------------------------SLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMML 247 (336)
T ss_dssp ----------------------------------------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHH
T ss_pred -----------------------------------------ceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHH
Confidence 000011257999999999999999999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCCC-ccccccCchH-HHHHHHcCCCCCCCCCChHHH-------------HcCccc
Q 004989 303 ELFC---PFSTGEEKTRTMSSLRHRVLP-PQLLLKFPKE-ASFCLWLLHPEPSGRPKMGEL-------------LQSEFL 364 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~~p-~~~~~~~p~~-~~Li~~~L~~dP~~Rpta~ei-------------L~hp~~ 364 (720)
||++ ||...... ..+..+.....+ ..++..++.. .+||.+||++||.+|||+.|+ |+|||+
T Consensus 248 emltG~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~~l~hPw~ 326 (336)
T 4g3f_A 248 HMLNGCHPWTQYFRG-PLCLKIASEPPPIREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVGGLKSPWK 326 (336)
T ss_dssp HHHHSSCSSTTTCCS-CCHHHHHHSCCGGGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTTSSCSCSS
T ss_pred HHHHCcCCCCCCCHH-HHHHHHHcCCCCchhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhhhccCCCc
Confidence 9999 77654433 223333333322 2344444444 599999999999999999998 569999
Q ss_pred CCCccc
Q 004989 365 NEPRDS 370 (720)
Q Consensus 365 ~~~~~~ 370 (720)
.+..++
T Consensus 327 ~~~~~P 332 (336)
T 4g3f_A 327 GEYKEP 332 (336)
T ss_dssp SSCCCC
T ss_pred CCCCCC
Confidence 887554
No 10
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=5.5e-43 Score=385.03 Aligned_cols=221 Identities=15% Similarity=0.161 Sum_probs=168.7
Q ss_pred hchhhhhhcccCCCCCceecccceeecC---CCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENE---AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~---~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
+..+|+.+|++++|||||++++ ++... .....+|+||||.+|+|.++|.+. ..+++.+++.|++||+.||.|||+
T Consensus 99 ~~~~Ei~il~~l~HpnIv~l~~-~~~~~~~~~~~~~~~ivmE~~~g~L~~~i~~~-~~l~~~~~~~~~~qil~al~ylH~ 176 (398)
T 4b99_A 99 RTLRELKILKHFKHDNIIAIKD-ILRPTVPYGEFKSVYVVLDLMESDLHQIIHSS-QPLTLEHVRYFLYQLLRGLKYMHS 176 (398)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-ECCCSSCTTTCCCEEEEEECCSEEHHHHHTSS-SCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCcceEee-eeecccccccCCEEEEEEeCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH
Confidence 4558999999999999999999 44332 223468999999778999999554 459999999999999999999999
Q ss_pred CCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCC
Q 004989 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+|||||||||+|||++.+|.+||+|||+++.+......
T Consensus 177 ~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~~~~~------------------------------------------ 214 (398)
T 4b99_A 177 AQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAE------------------------------------------ 214 (398)
T ss_dssp TTCBCCCCCGGGEEECTTCCEEECCCTTCBCC------------------------------------------------
T ss_pred CcCcCCCcCccccccCCCCCEEEeecceeeecccCccc------------------------------------------
Confidence 99999999999999999999999999988543221000
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC-CCccccchhhh
Q 004989 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLG 298 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLG 298 (720)
........+||++|||||++.+.. |+.++||||||
T Consensus 215 --------------------------------------------~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG 250 (398)
T 4b99_A 215 --------------------------------------------HQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVG 250 (398)
T ss_dssp ---------------------------------------------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHH
T ss_pred --------------------------------------------cccccccceeChHhcCHHHhcCCCCCCChhheehhH
Confidence 000011258999999999998865 79999999999
Q ss_pred chhhhccc---cCCCCchHHHHHHHhhc-CCCCcc----------------------------ccccCchHHHHHHHcCC
Q 004989 299 VLLFELFC---PFSTGEEKTRTMSSLRH-RVLPPQ----------------------------LLLKFPKEASFCLWLLH 346 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~-~~~p~~----------------------------~~~~~p~~~~Li~~~L~ 346 (720)
|++|||++ ||.+.+........+.. +.++.. +....+...+||.+||.
T Consensus 251 ~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~ 330 (398)
T 4b99_A 251 CIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLR 330 (398)
T ss_dssp HHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSC
T ss_pred HHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCc
Confidence 99999999 77766554333222211 111110 01123445699999999
Q ss_pred CCCCCCCChHHHHcCcccCCCccch
Q 004989 347 PEPSGRPKMGELLQSEFLNEPRDSM 371 (720)
Q Consensus 347 ~dP~~Rpta~eiL~hp~~~~~~~~l 371 (720)
+||.+|||+.|+|+||||++..++.
T Consensus 331 ~dP~~R~ta~e~L~Hp~f~~~~~p~ 355 (398)
T 4b99_A 331 FEPSARISAAAALRHPFLAKYHDPD 355 (398)
T ss_dssp SSTTTSCCHHHHTTSGGGTTTCCGG
T ss_pred CChhHCcCHHHHhcCHhhCcCCCCc
Confidence 9999999999999999999875543
No 11
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=1.6e-41 Score=359.97 Aligned_cols=238 Identities=15% Similarity=0.186 Sum_probs=175.3
Q ss_pred CcccccccccC----CCCCCcccccccccCCCCccchhhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-C
Q 004989 29 SRALNISGVSD----RNPRLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-G 103 (720)
Q Consensus 29 ~~~~~~~~~~~----~~~~~~~~~r~~~~~~~~~~~~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ 103 (720)
.+.+|.++++. ...+.++++.+.... .+....-+..+|+.+|++++|||||++++ ++..+ .+|+|||| .
T Consensus 41 ~~~iG~G~fG~Vy~~~~~~~vAvK~~~~~~-~~~~~~~~f~~E~~il~~l~HpNIV~l~g-~~~~~----~~~iVmEy~~ 114 (307)
T 3omv_A 41 STRIGSGSFGTVYKGKWHGDVAVKILKVVD-PTPEQFQAFRNEVAVLRKTRHVNILLFMG-YMTKD----NLAIVTQWCE 114 (307)
T ss_dssp EEECCCCSSSEEEEEESSSEEEEEECCCSS-CCHHHHHHHHHHHHHHTTCCCTTBCCEEE-EECSS----SCEEEEECCS
T ss_pred eeEEeeCCCcEEEEEEECCcEEEEEEEecC-CCHHHHHHHHHHHHHHHhCCCCCEeeEEE-EEECC----eEEEEEEcCC
Confidence 33455555544 333344544443222 22222234458899999999999999999 55433 46999999 9
Q ss_pred CCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccc
Q 004989 104 DVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQ 183 (720)
Q Consensus 104 ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~ 183 (720)
||+|.++|......+++.++..|+.||+.||.|||++|||||||||+||||+.++++||+|||+|+........
T Consensus 115 gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~------ 188 (307)
T 3omv_A 115 GSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGS------ 188 (307)
T ss_dssp SCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEETTEEEEECCCSSCBC-------------
T ss_pred CCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEECCCCcEEEeeccCceecccCCcc------
Confidence 99999999766667999999999999999999999999999999999999999999999988887432111000
Q ss_pred cccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCC
Q 004989 184 NMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQP 263 (720)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~ 263 (720)
T Consensus 189 -------------------------------------------------------------------------------- 188 (307)
T 3omv_A 189 -------------------------------------------------------------------------------- 188 (307)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCccccccccCCcccCcccccCC---CCCccccchhhhchhhhccc---cCCCCchHHHHHHHhhcCCCCcc---ccccC
Q 004989 264 FPMKQILLMETNWYASPEELAGA---PVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQ---LLLKF 334 (720)
Q Consensus 264 ~~~~~~~~~GT~~Y~APE~l~~~---~~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~---~~~~~ 334 (720)
......+||+.|||||++.+. +|+.++|||||||+||||+| ||............+..+..+|. ....+
T Consensus 189 --~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 266 (307)
T 3omv_A 189 --QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNC 266 (307)
T ss_dssp -------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCCCSTTSCTTS
T ss_pred --eeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCCcccccccc
Confidence 000124799999999999643 48999999999999999999 88776655555555555544433 33344
Q ss_pred ch-HHHHHHHcCCCCCCCCCChHHHHc
Q 004989 335 PK-EASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 335 p~-~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|. ..+|+.+||+.||++|||+.||++
T Consensus 267 ~~~l~~li~~cl~~dP~~RPs~~ei~~ 293 (307)
T 3omv_A 267 PKAMKRLVADCVKKVKEERPLFPQILS 293 (307)
T ss_dssp CHHHHHHHHHHTCSSSTTSCCHHHHHH
T ss_pred hHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence 44 459999999999999999998764
No 12
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=7.6e-41 Score=363.87 Aligned_cols=236 Identities=18% Similarity=0.222 Sum_probs=163.4
Q ss_pred hhchhhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004989 62 LRKHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 62 ~r~~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
.+..+|..+|..+ +|||||++++ ++++.. ++|+|||| .|++|.++++ .+++.+++.|++||+.||+|||+
T Consensus 64 ~~~~~E~~~l~~~~~h~nIv~l~~-~~~~~~---~~~lvmE~~~g~~L~~~~~----~l~~~~~~~~~~qll~al~ylH~ 135 (361)
T 4f9c_A 64 IRIAAELQCLTVAGGQDNVMGVKY-CFRKND---HVVIAMPYLEHESFLDILN----SLSFQEVREYMLNLFKALKRIHQ 135 (361)
T ss_dssp HHHHHHHHHHHHTCSBTTBCCCSE-EEEETT---EEEEEEECCCCCCHHHHHT----TCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCceEEE-EEEECC---EEEEEEeCCCcccHHHHHc----CCCHHHHHHHHHHHHHHHHHHHH
Confidence 4555788888887 6999999999 665554 68999999 8999999993 39999999999999999999999
Q ss_pred CCceeccCCCCcEEEccC-CceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCC
Q 004989 140 QGIVVHNVRPSCFVMSSF-NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~-~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
+|||||||||+|||++.+ +.+||+|||+|+........ ..+|+.......
T Consensus 136 ~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~~-----------------------------~~~~~~~~~~~~ 186 (361)
T 4f9c_A 136 FGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIE-----------------------------LLKFVQSEAQQE 186 (361)
T ss_dssp TTEECSCCSGGGEEEETTTTEEEECCCTTCEECTTCSCG-----------------------------GGGGC-------
T ss_pred CCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCcccc-----------------------------cccccccccccc
Confidence 999999999999999866 89999999999654332111 122211111000
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC-CCccccchhh
Q 004989 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRL 297 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSL 297 (720)
......+ . .. ..........+||++|+|||++.+.. |+.++||||+
T Consensus 187 ~~~~~~~---~--------------------~~----------~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSl 233 (361)
T 4f9c_A 187 RCSQNKC---S--------------------IC----------LSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSA 233 (361)
T ss_dssp ----------------------------------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHH
T ss_pred ccccccc---c--------------------cc----------ccccccccccccCccccCHHHHcCCCCCCCccchhhh
Confidence 0000000 0 00 00000112368999999999998865 8999999999
Q ss_pred hchhhhccc---cCCCCchHHHHHHHhhc---------------------CCCC--------------------------
Q 004989 298 GVLLFELFC---PFSTGEEKTRTMSSLRH---------------------RVLP-------------------------- 327 (720)
Q Consensus 298 Gvll~eLlt---pf~~~~~~~~~~~~l~~---------------------~~~p-------------------------- 327 (720)
||++|||++ ||.+.......+..+.. ...|
T Consensus 234 G~il~ell~G~~Pf~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~ 313 (361)
T 4f9c_A 234 GVIFLSLLSGRYPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQ 313 (361)
T ss_dssp HHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC--------------
T ss_pred HHHHHHHHHCCCCCCCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccc
Confidence 999999999 77655433222222110 0000
Q ss_pred ------ccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 328 ------PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 328 ------~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
+.+....+...|||.+||++||++|||++|+|+||||++.
T Consensus 314 ~~~~~~~~~~~is~~a~DLl~~lL~~dP~~R~ta~eaL~Hp~f~~i 359 (361)
T 4f9c_A 314 GHATNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALLHPFFKDM 359 (361)
T ss_dssp --------CTTCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGTTC
T ss_pred cccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCCC
Confidence 0011122344599999999999999999999999999875
No 13
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=2.1e-40 Score=350.93 Aligned_cols=204 Identities=19% Similarity=0.189 Sum_probs=162.7
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC------------CCCCCHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP------------KRSVDVYECLHIFRQ 129 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~------------~~~l~~~~~~~i~~Q 129 (720)
+..+|+.+|++++|||||++++ ++.++. .+|+|||| .+|+|.++|.+. ...+++.+++.|+.|
T Consensus 61 ~f~~E~~il~~l~HpnIV~l~g-~~~~~~---~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~q 136 (299)
T 4asz_A 61 DFHREAELLTNLQHEHIVKFYG-VCVEGD---PLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQ 136 (299)
T ss_dssp HHHHHHHHHTTCCCTTBCCEEE-EECSSS---SEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCccEEE-EEeeCC---EEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHH
Confidence 4458889999999999999999 555543 57999999 999999999543 245999999999999
Q ss_pred HHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccc
Q 004989 130 IVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRRED 209 (720)
Q Consensus 130 Il~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~D 209 (720)
|+.||.|||+++||||||||+||||+.++.+||+|||+++..... +
T Consensus 137 ia~gl~yLH~~~iiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~----------------------------------~ 182 (299)
T 4asz_A 137 IAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYST----------------------------------D 182 (299)
T ss_dssp HHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGG----------------------------------G
T ss_pred HHHHHHHHHhCCcccCccCHhhEEECCCCcEEECCcccceecCCC----------------------------------C
Confidence 999999999999999999999999999999999988887432100 0
Q ss_pred cccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCC
Q 004989 210 LQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVS 289 (720)
Q Consensus 210 fgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s 289 (720)
. . .......||+.|||||++.+..|+
T Consensus 183 ~----------------------------------~--------------------~~~~~~~gt~~ymAPE~~~~~~~~ 208 (299)
T 4asz_A 183 Y----------------------------------Y--------------------RVGGHTMLPIRWMPPESIMYRKFT 208 (299)
T ss_dssp C----------------------------------E--------------------EETTTEEECGGGCCHHHHHHCCCC
T ss_pred c----------------------------------e--------------------eecCceecChhhcCHHHHcCCCCC
Confidence 0 0 000114689999999999999999
Q ss_pred ccccchhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHH
Q 004989 290 CASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELL 359 (720)
Q Consensus 290 ~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL 359 (720)
.++|||||||+||||+| ||...... ..+..+..+..++......+...+|+.+||+.||++|||+.||+
T Consensus 209 ~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~-~~~~~i~~~~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~ 281 (299)
T 4asz_A 209 TESDVWSLGVVLWEIFTYGKQPWYQLSNN-EVIECITQGRVLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIH 281 (299)
T ss_dssp HHHHHHHHHHHHHHHHTTTCCTTTTSCHH-HHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred chhhHHHHHHHHHHHHcCCCCCCCCCCHH-HHHHHHHcCCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHH
Confidence 99999999999999997 77665544 45555555544433323334455999999999999999999995
No 14
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=3.4e-40 Score=350.76 Aligned_cols=223 Identities=15% Similarity=0.194 Sum_probs=169.8
Q ss_pred CCcccccccccCCCCccchhhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC-------
Q 004989 43 RLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP------- 114 (720)
Q Consensus 43 ~~~~~~r~~~~~~~~~~~~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~------- 114 (720)
..++++++..... ....-+..+|+.+|++++|||||++++ ++.++. .+|+|||| .+|+|.++|...
T Consensus 57 ~~VAvK~l~~~~~--~~~~~~f~~E~~il~~l~HpNIV~l~g-~~~~~~---~~~lV~Ey~~~G~L~~~L~~~~~~~~~~ 130 (308)
T 4gt4_A 57 QAVAIKTLKDKAE--GPLREEFRHEAMLRARLQHPNVVCLLG-VVTKDQ---PLSMIFSYCSHGDLHEFLVMRSPHSDVG 130 (308)
T ss_dssp EEEEEEECCC-CC--C-CHHHHHHHHHHHHHCCCTTBCCEEE-EECSSS---SCEEEEECCSSCBHHHHHHTTCSSCCCC
T ss_pred eEEEEEEECcccC--hHHHHHHHHHHHHHHhCCCCCCCCcce-EEEECC---EEEEEEEcCCCCcHHHHHHhhCcccccc
Confidence 3455555443222 222223347888999999999999999 555443 57999999 999999999432
Q ss_pred --------CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCccccccccccc
Q 004989 115 --------KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNME 186 (720)
Q Consensus 115 --------~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~ 186 (720)
...+++.+++.|+.||+.||.|||+++||||||||+||||+.++.+||+|||+++.....
T Consensus 131 ~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~~~Ki~DFGlar~~~~~------------ 198 (308)
T 4gt4_A 131 STDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAA------------ 198 (308)
T ss_dssp -----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCSCCBCGGGGG------------
T ss_pred ccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEECCCCCEEECCcccceeccCC------------
Confidence 134899999999999999999999999999999999999999999999988887432100
Q ss_pred ccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCc
Q 004989 187 TKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPM 266 (720)
Q Consensus 187 ~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~ 266 (720)
+. ..
T Consensus 199 ----------------------~~------------------------------------------------------~~ 202 (308)
T 4gt4_A 199 ----------------------DY------------------------------------------------------YK 202 (308)
T ss_dssp ----------------------GC------------------------------------------------------BC
T ss_pred ----------------------Cc------------------------------------------------------ee
Confidence 00 00
Q ss_pred cccccccCCcccCcccccCCCCCccccchhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCch-HHHHH
Q 004989 267 KQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPK-EASFC 341 (720)
Q Consensus 267 ~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~-~~~Li 341 (720)
.....+||+.|||||++.+..|+.++|||||||+||||+| ||...... ..+..+..+..++.. ..+|. ..+|+
T Consensus 203 ~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~-~~~~~i~~~~~~~~p-~~~~~~~~~li 280 (308)
T 4gt4_A 203 LLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ-DVVEMIRNRQVLPCP-DDCPAWVYALM 280 (308)
T ss_dssp SSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHH-HHHHHHHTTCCCCCC-TTCCHHHHHHH
T ss_pred EecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHH-HHHHHHHcCCCCCCc-ccchHHHHHHH
Confidence 0011478999999999999999999999999999999997 77766544 455556655554443 34444 45999
Q ss_pred HHcCCCCCCCCCChHHHHcC
Q 004989 342 LWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 342 ~~~L~~dP~~Rpta~eiL~h 361 (720)
.+||+.||++|||+.||+++
T Consensus 281 ~~C~~~dP~~RPs~~ei~~~ 300 (308)
T 4gt4_A 281 IECWNEFPSRRPRFKDIHSR 300 (308)
T ss_dssp HHHTCSSGGGSCCHHHHHHH
T ss_pred HHHcCCChhHCcCHHHHHHH
Confidence 99999999999999999863
No 15
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=2.2e-40 Score=380.75 Aligned_cols=203 Identities=17% Similarity=0.174 Sum_probs=162.4
Q ss_pred hhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCcee
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.+..+++.++|||||++++ +|++.. .+|+|||| .||+|.++|.+.+ .+++..++.|+.||+.||+|||++||||
T Consensus 241 ~~l~ll~~~~HP~IV~l~~-~f~~~~---~lylVmEy~~GGdL~~~l~~~~-~l~E~~a~~y~~qIl~aL~yLH~~gIiH 315 (689)
T 3v5w_A 241 IMLSLVSTGDCPFIVCMSY-AFHTPD---KLSFILDLMNGGDLHYHLSQHG-VFSEADMRFYAAEIILGLEHMHNRFVVY 315 (689)
T ss_dssp HHHHHHSSSCCTTBCCEEE-EEECSS---EEEEEECCCCSCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHTTTEEC
T ss_pred HHHHHHhhCCCCCEeEEEE-EEEECC---EEEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 4456778899999999999 666654 68999999 9999999996544 4999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccc
Q 004989 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+||||+.+|++||+|||+|+.....
T Consensus 316 RDLKPeNILld~~G~vKL~DFGlA~~~~~~-------------------------------------------------- 345 (689)
T 3v5w_A 316 RDLKPANILLDEHGHVRISDLGLACDFSKK-------------------------------------------------- 345 (689)
T ss_dssp CCCSGGGEEECTTSCEEECCCTTCEECSSC--------------------------------------------------
T ss_pred cCCchHHeEEeCCCCEEecccceeeecCCC--------------------------------------------------
Confidence 999999999999999999999888432111
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC-CCCCccccchhhhchhhh
Q 004989 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFE 303 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sDIwSLGvll~e 303 (720)
.....+||+.|||||++.+ ..|+.++|||||||+|||
T Consensus 346 ------------------------------------------~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYE 383 (689)
T 3v5w_A 346 ------------------------------------------KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFK 383 (689)
T ss_dssp ------------------------------------------CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHH
T ss_pred ------------------------------------------CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHH
Confidence 0011489999999999975 569999999999999999
Q ss_pred ccc---cCCCCc--hHHHHHHHhhcCCCCcccccc-CchHHHHHHHcCCCCCCCCCC-----hHHHHcCcccCCC
Q 004989 304 LFC---PFSTGE--EKTRTMSSLRHRVLPPQLLLK-FPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~--~~~~~~~~l~~~~~p~~~~~~-~p~~~~Li~~~L~~dP~~Rpt-----a~eiL~hp~~~~~ 367 (720)
|++ ||.... ........+.... ..++.. .+...+||.+||++||.+|++ ++||++||||+..
T Consensus 384 mLtG~~PF~~~~~~~~~~i~~~i~~~~--~~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~HpfF~~i 456 (689)
T 3v5w_A 384 LLRGHSPFRQHKTKDKHEIDRMTLTMA--VELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSL 456 (689)
T ss_dssp HHHSSCTTCGGGCCCHHHHHHHHHHCC--CCCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTSGGGTTC
T ss_pred HHhCCCCCCCCChHHHHHHHHhhcCCC--CCCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcCccccCC
Confidence 999 665422 2223333333222 122223 345569999999999999998 7999999999986
No 16
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=3.2e-39 Score=346.43 Aligned_cols=205 Identities=15% Similarity=0.139 Sum_probs=159.5
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC--------------CCCCHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK--------------RSVDVYECLHIF 127 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~--------------~~l~~~~~~~i~ 127 (720)
+..+|+.+|++++|||||++++ ++.+.. .+|+|||| .+|+|.++|.+.. .++++.+++.|+
T Consensus 89 ~f~~E~~il~~l~HpnIV~l~g-~~~~~~---~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~ 164 (329)
T 4aoj_A 89 DFQREAELLTMLQHQHIVRFFG-VCTEGR---PLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 164 (329)
T ss_dssp HHHHHHHHHTTCCCTTBCCEEE-EECSSS---SEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCCcEEE-EEEECC---EEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHH
Confidence 4458889999999999999999 555443 57999999 9999999995432 358999999999
Q ss_pred HHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccc
Q 004989 128 RQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRR 207 (720)
Q Consensus 128 ~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l 207 (720)
.||+.||.|||+++||||||||+||||+.++.+||+|||+++......
T Consensus 165 ~qia~gl~yLH~~~iiHRDLKp~NILl~~~~~~Ki~DFGla~~~~~~~-------------------------------- 212 (329)
T 4aoj_A 165 SQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTD-------------------------------- 212 (329)
T ss_dssp HHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECCCC-----------------------------------------
T ss_pred HHHHHHHHHHhcCCeecccccHhhEEECCCCcEEEcccccceeccCCC--------------------------------
Confidence 999999999999999999999999999999999999888875321110
Q ss_pred cccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC
Q 004989 208 EDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP 287 (720)
Q Consensus 208 ~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 287 (720)
. .......+||+.|||||++.+..
T Consensus 213 --~------------------------------------------------------~~~~~~~~gt~~ymAPE~~~~~~ 236 (329)
T 4aoj_A 213 --Y------------------------------------------------------YRVGGRTMLPIRWMPPESILYRK 236 (329)
T ss_dssp ---------------------------------------------------------------CCCCGGGCCHHHHTTCC
T ss_pred --c------------------------------------------------------ceecCcccccccccChhhhcCCC
Confidence 0 00001147899999999999999
Q ss_pred CCccccchhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 288 VSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 288 ~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|+.++|||||||+||||+| ||...... ..+..+..+..++......+...+|+.+||+.||++|||+.||++
T Consensus 237 ~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~-~~~~~i~~g~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~ 312 (329)
T 4aoj_A 237 FTTESDVWSFGVVLWEIFTYGKQPWYQLSNT-EAIDCITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHA 312 (329)
T ss_dssp CCHHHHHHHHHHHHHHHHTTSCCTTCSSCHH-HHHHHHHHTCCCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHH
T ss_pred CCccccccchHHHHHHHHcCCCCCCCCCCHH-HHHHHHHcCCCCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHH
Confidence 9999999999999999997 77665544 444555554433332233344559999999999999999999986
No 17
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=5.7e-39 Score=369.46 Aligned_cols=209 Identities=17% Similarity=0.262 Sum_probs=171.1
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..+|+.++|||||++++ ++++.. .+|++||| .||+|.++|......+++.+++.|++||+.||.|||++||+
T Consensus 202 ~~Ei~il~~l~hpnIv~l~~-~~~~~~---~~~iv~E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~ii 277 (573)
T 3uto_A 202 RKEIQTMSVLRHPTLVNLHD-AFEDDN---EMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYV 277 (573)
T ss_dssp HHHHHHHHHTCCTTBCCEEE-EEECSS---EEEEEEECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHhCCCCCCCeEEE-EEEECC---EEEEEEeecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 37888999999999999999 666554 68999999 89999999965555699999999999999999999999999
Q ss_pred eccCCCCcEEEccC--CceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 144 VHNVRPSCFVMSSF--NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 144 HrDLKP~NILl~~~--~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
||||||+|||++.+ +.+||+|||+++......
T Consensus 278 HRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~---------------------------------------------- 311 (573)
T 3uto_A 278 HLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ---------------------------------------------- 311 (573)
T ss_dssp CCCCCGGGEEESSSSCCCEEECCCSSCEECCTTS----------------------------------------------
T ss_pred eccCChhhccccCCCCCCEEEeeccceeEccCCC----------------------------------------------
Confidence 99999999999854 899999888874321110
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
.....+||++|||||++.+..|+.++|||||||+|
T Consensus 312 ---------------------------------------------~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvil 346 (573)
T 3uto_A 312 ---------------------------------------------SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLS 346 (573)
T ss_dssp ---------------------------------------------EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHH
T ss_pred ---------------------------------------------ceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHH
Confidence 00124799999999999999999999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCC--CCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRHRV--LPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~--~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
|||++ ||...... ..+..+.... +++.....++ ...+||.+||++||.+|||+.|+|+||||+....
T Consensus 347 yeml~G~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~Hpw~~~~~~ 419 (573)
T 3uto_A 347 YILLSGLSPFGGENDD-ETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNA 419 (573)
T ss_dssp HHHHHSCCSSCCSSHH-HHHHHHHTTCCCCCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTSCCCC
T ss_pred HHHHHCCCCCCCcCHH-HHHHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCcCcCCCCC
Confidence 99999 77765554 4444554432 3344444444 4459999999999999999999999999997644
No 18
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=3.4e-39 Score=342.93 Aligned_cols=228 Identities=12% Similarity=0.104 Sum_probs=162.8
Q ss_pred CCCCcccccccccCCCCccchhhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCC
Q 004989 41 NPRLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVD 119 (720)
Q Consensus 41 ~~~~~~~~r~~~~~~~~~~~~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~ 119 (720)
+...++++++... ....+..++|...+.+++|||||++++++..+......+|+|||| .+|+|.++|++. +++
T Consensus 25 ~g~~VAvK~l~~~----~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~--~l~ 98 (303)
T 3hmm_A 25 RGEEVAVKIFSSR----EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY--TVT 98 (303)
T ss_dssp TTEEEEEEEECGG----GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHHC--CBC
T ss_pred CCEEEEEEEECcc----chhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecCCCCCcHHHHHHhC--CCC
Confidence 3344555554321 233445567888889999999999999555544444468999999 899999999654 389
Q ss_pred HHHHHHHHHHHHHHHHHHHHC--------CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCC
Q 004989 120 VYECLHIFRQIVEIVYAAHSQ--------GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLS 191 (720)
Q Consensus 120 ~~~~~~i~~QIl~aL~yLHs~--------gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~ 191 (720)
+..+..|+.||+.||.|||++ |||||||||+||||+.++++||+|||+++......
T Consensus 99 ~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~---------------- 162 (303)
T 3hmm_A 99 VEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSAT---------------- 162 (303)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEETTT----------------
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccccCCC----------------
Confidence 999999999999999999987 99999999999999999999999888874321110
Q ss_pred CCCchhhhhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCcccccc
Q 004989 192 SPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILL 271 (720)
Q Consensus 192 ~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~ 271 (720)
+. ........
T Consensus 163 -----------------~~-----------------------------------------------------~~~~~~~~ 172 (303)
T 3hmm_A 163 -----------------DT-----------------------------------------------------IDIAPNHR 172 (303)
T ss_dssp -----------------TE-----------------------------------------------------ESCC----
T ss_pred -----------------Cc-----------------------------------------------------eeeecccc
Confidence 00 00001125
Q ss_pred ccCCcccCcccccCC------CCCccccchhhhchhhhccc---cCC----------CC----chHHHHHHHhhcCCCCc
Q 004989 272 METNWYASPEELAGA------PVSCASDIYRLGVLLFELFC---PFS----------TG----EEKTRTMSSLRHRVLPP 328 (720)
Q Consensus 272 ~GT~~Y~APE~l~~~------~~s~~sDIwSLGvll~eLlt---pf~----------~~----~~~~~~~~~l~~~~~p~ 328 (720)
+||++|||||++.+. .|+.++|||||||+||||+| ||. .. .........+....+.|
T Consensus 173 ~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~rp 252 (303)
T 3hmm_A 173 VGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRP 252 (303)
T ss_dssp -CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCC
T ss_pred cccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHHHHHHHHhcccCCC
Confidence 799999999999765 36789999999999999998 221 10 11223333343444433
Q ss_pred cccccC------chHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 329 QLLLKF------PKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 329 ~~~~~~------p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
.++..+ ....+|+.+||+.||++|||+.||++
T Consensus 253 ~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~ 290 (303)
T 3hmm_A 253 NIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKK 290 (303)
T ss_dssp CCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHH
T ss_pred CCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHH
Confidence 333222 13358999999999999999999985
No 19
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=9.1e-39 Score=345.80 Aligned_cols=208 Identities=20% Similarity=0.204 Sum_probs=165.0
Q ss_pred hchhhhhhcccCCC-CCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC---------------CCCCCHHHHHH
Q 004989 63 RKHSDGVELTHGDH-LRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---------------KRSVDVYECLH 125 (720)
Q Consensus 63 r~~~e~~~L~~l~H-pnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~---------------~~~l~~~~~~~ 125 (720)
+..+|..+|.+++| ||||++++++.+++. .+|+|||| .+|+|.++|++. ...+++.+++.
T Consensus 113 ~~~~E~~il~~l~hhpnIV~l~g~~~~~~~---~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 189 (353)
T 4ase_A 113 ALMSELKILIHIGHHLNVVNLLGACTKPGG---PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 189 (353)
T ss_dssp HHHHHHHHHHHHCCCTTBCCEEEEECCTTS---CCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHH
T ss_pred HHHHHHHHHHHcCCCCcEEEEEEEEEecCC---EEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHH
Confidence 34478889999876 899999994434332 47999999 999999999532 23489999999
Q ss_pred HHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcc
Q 004989 126 IFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRL 205 (720)
Q Consensus 126 i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 205 (720)
|+.||+.||.|||+++||||||||+|||++.++.+||+|||+|+......
T Consensus 190 ~~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~~vKi~DFGlar~~~~~~------------------------------ 239 (353)
T 4ase_A 190 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP------------------------------ 239 (353)
T ss_dssp HHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCT------------------------------
T ss_pred HHHHHHHHHHhHhhCCeecCccCccceeeCCCCCEEECcchhhhhcccCC------------------------------
Confidence 99999999999999999999999999999999999999888885432110
Q ss_pred cccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC
Q 004989 206 RREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG 285 (720)
Q Consensus 206 ~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 285 (720)
+. .......||+.|||||++.+
T Consensus 240 ---~~-------------------------------------------------------~~~~~~~gt~~ymAPE~l~~ 261 (353)
T 4ase_A 240 ---DY-------------------------------------------------------VRKGDARLPLKWMAPETIFD 261 (353)
T ss_dssp ---TS-------------------------------------------------------EEETTEEECGGGCCHHHHHH
T ss_pred ---Cc-------------------------------------------------------eeeccccccccccCHHHHhc
Confidence 00 00112478999999999999
Q ss_pred CCCCccccchhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004989 286 APVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 286 ~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~h 361 (720)
..|+.++|||||||+||||+| ||............+..+..++......+...+||.+||+.||++|||+.||++|
T Consensus 262 ~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~~~~~i~~g~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~ 341 (353)
T 4ase_A 262 RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 341 (353)
T ss_dssp CCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence 999999999999999999997 7877654445555666554444333344555699999999999999999999975
No 20
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=1.1e-36 Score=325.31 Aligned_cols=226 Identities=24% Similarity=0.381 Sum_probs=177.7
Q ss_pred hchhhhhhcccCCCCCceecccceeecCC---------------------------------------------------
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEA--------------------------------------------------- 91 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~--------------------------------------------------- 91 (720)
+..+|..+|++++|||||++++.+.+...
T Consensus 50 ~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (332)
T 3qd2_B 50 KVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQP 129 (332)
T ss_dssp HHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHHHC------------------------------------------
T ss_pred HHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccC
Confidence 44578889999999999999995443321
Q ss_pred --CCCcEEEEEec-CCCCHHHHHhCCCC--CCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecC
Q 004989 92 --AIDPFVHAIEW-GDVSLRQWLDKPKR--SVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESA 166 (720)
Q Consensus 92 --~~~~~~lv~E~-~ggsL~~~L~~~~~--~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg 166 (720)
....++++||| .|++|.+++..... ..++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||
T Consensus 130 ~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG 209 (332)
T 3qd2_B 130 SSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFG 209 (332)
T ss_dssp --CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCT
T ss_pred CCCCceEEEEEEecCCCCHHHHHhcccCccchhhHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCCCCEEEeecC
Confidence 11247999999 89999999955332 35667799999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCCCcccccccccccccccc
Q 004989 167 SCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHK 246 (720)
Q Consensus 167 ~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~ 246 (720)
++...+....... .+.
T Consensus 210 ~a~~~~~~~~~~~-----------------------------~~~----------------------------------- 225 (332)
T 3qd2_B 210 LVTAMDQDEEEQT-----------------------------VLT----------------------------------- 225 (332)
T ss_dssp TCEECSCC------------------------------------------------------------------------
T ss_pred cccccccchhhcc-----------------------------ccc-----------------------------------
Confidence 9855432210000 000
Q ss_pred ccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhccccCCCCchHHHHHHHhhcCCC
Q 004989 247 ILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRVL 326 (720)
Q Consensus 247 ~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLltpf~~~~~~~~~~~~l~~~~~ 326 (720)
............||+.|+|||++.+..++.++|||||||++|||++|+.+..........+....+
T Consensus 226 --------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~~~~~~~~~~~~ 291 (332)
T 3qd2_B 226 --------------PMPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVRIITDVRNLKF 291 (332)
T ss_dssp --------------------CCCSCC-CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHTTCC
T ss_pred --------------cccccccccccCCCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHHHHHHHhhccCC
Confidence 000000011247899999999999999999999999999999999999887776677777777777
Q ss_pred CccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCC
Q 004989 327 PPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 366 (720)
Q Consensus 327 p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~ 366 (720)
|.......+...+||.+||++||.+|||+.|+|+||||++
T Consensus 292 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~f~~ 331 (332)
T 3qd2_B 292 PLLFTQKYPQEHMMVQDMLSPSPTERPEATDIIENAIFEN 331 (332)
T ss_dssp CHHHHHHCHHHHHHHHHHHCSSGGGSCCHHHHHHSTTCCC
T ss_pred CcccccCChhHHHHHHHHccCCCCcCCCHHHHhhchhhhc
Confidence 7777777788889999999999999999999999999986
No 21
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=3.5e-36 Score=323.30 Aligned_cols=208 Identities=17% Similarity=0.215 Sum_probs=166.4
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|..++||||+++++ ++.... .+|+|||| .|++|.+++...+ .+++.+++.++.||+.||.|||++|
T Consensus 60 ~~~~E~~~l~~l~hpnIv~l~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~al~~lH~~~ 134 (328)
T 3fe3_A 60 KLFREVRIMKILNHPNIVKLFE-VIETEK---TLYLIMEYASGGEVFDYLVAHG-RMKEKEARSKFRQIVSAVQYCHQKR 134 (328)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EEECSS---EEEEEECCCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCEeeEEE-EEEECC---EEEEEEECCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 4558888999999999999999 555543 57999999 7999999995543 4999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||++.......
T Consensus 135 ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~---------------------------------------------- 168 (328)
T 3fe3_A 135 IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG---------------------------------------------- 168 (328)
T ss_dssp CCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSC----------------------------------------------
T ss_pred EeccCCCHHHEEEcCCCCEEEeeccCceecCCCC----------------------------------------------
Confidence 9999999999999999999999998873221000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCC-Cccccchhhhch
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYRLGVL 300 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~-s~~sDIwSLGvl 300 (720)
.....+||++|+|||++.+..+ +.++|||||||+
T Consensus 169 ---------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~i 203 (328)
T 3fe3_A 169 ---------------------------------------------KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVI 203 (328)
T ss_dssp ---------------------------------------------GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHH
T ss_pred ---------------------------------------------ccccccCCcceeCcccccCCCcCCchhhhhhhHHH
Confidence 0011478999999999998886 489999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004989 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
+|||++ ||...... .....+..+..+.. ....+...+|+.+||..||.+|||+.|+|+||||+...
T Consensus 204 l~ell~g~~pf~~~~~~-~~~~~i~~~~~~~p-~~~s~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~~~ 272 (328)
T 3fe3_A 204 LYTLVSGSLPFDGQNLK-ELRERVLRGKYRIP-FYMSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINAGH 272 (328)
T ss_dssp HHHHHHSSCSSCCSSHH-HHHHHHHHCCCCCC-TTSCHHHHHHHHHHCCSSTTTSCCHHHHTTCTTTTTTC
T ss_pred HHHHHhCCCCCCCCCHH-HHHHHHHhCCCCCC-CCCCHHHHHHHHHHCCCChhHCcCHHHHhcCHhhcCCC
Confidence 999999 77665544 33333333322211 12335556999999999999999999999999998753
No 22
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=8.5e-36 Score=324.57 Aligned_cols=208 Identities=18% Similarity=0.261 Sum_probs=167.9
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++||||+++++ ++++.. .+|+|||| .|++|.+++... ..+++.+++.++.||+.||.|||++|
T Consensus 61 ~~~~E~~il~~l~hpnIv~l~~-~~~~~~---~~~lv~e~~~gg~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~g 135 (361)
T 2yab_A 61 EIEREVSILRQVLHPNIITLHD-VYENRT---DVVLILELVSGGELFDFLAQK-ESLSEEEATSFIKQILDGVNYLHTKK 135 (361)
T ss_dssp HHHHHHHHHTTCCCTTBCCEEE-EEECSS---EEEEEEECCCSCBHHHHHTTC-SCCBHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCcCCCcEEE-EEEeCC---EEEEEEEcCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3447888999999999999999 665543 68999999 799999999554 45999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCC----ceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCC
Q 004989 142 IVVHNVRPSCFVMSSFN----HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~----~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~ 217 (720)
|+||||||+|||++.++ .+||+|||++.......
T Consensus 136 ivHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~~~~~------------------------------------------ 173 (361)
T 2yab_A 136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV------------------------------------------ 173 (361)
T ss_dssp EECCCCSGGGEEESCTTSSSCCEEECCCSSCEECCTTC------------------------------------------
T ss_pred cccCCCCHHHEEEeCCCCCccCEEEEecCCceEcCCCC------------------------------------------
Confidence 99999999999998776 79999888874321100
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhh
Q 004989 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRL 297 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSL 297 (720)
.....+||+.|+|||++.+..++.++|||||
T Consensus 174 -------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Diwsl 204 (361)
T 2yab_A 174 -------------------------------------------------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSI 204 (361)
T ss_dssp -------------------------------------------------CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHH
T ss_pred -------------------------------------------------ccccCCCCccEECchHHcCCCCCccccHHHH
Confidence 0011468999999999999889999999999
Q ss_pred hchhhhccc---cCCCCchHHHHHHHhhcCC--CCccccccCch-HHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 298 GVLLFELFC---PFSTGEEKTRTMSSLRHRV--LPPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 298 Gvll~eLlt---pf~~~~~~~~~~~~l~~~~--~p~~~~~~~p~-~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
||++|+|++ ||...... ..+..+.... +++......+. ..+||.+||.+||.+|||+.|+|+||||+..
T Consensus 205 Gvil~~ll~g~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~ 279 (361)
T 2yab_A 205 GVITYILLSGASPFLGDTKQ-ETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPV 279 (361)
T ss_dssp HHHHHHHHHSCCSSCCSSHH-HHHHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTSCS
T ss_pred HHHHHHHHhCCCCCCCCCHH-HHHHHHHhcCCCCCchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhcCcCcCCC
Confidence 999999999 67665443 3444444332 34444444444 4599999999999999999999999999875
No 23
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=8.6e-36 Score=313.85 Aligned_cols=211 Identities=16% Similarity=0.205 Sum_probs=163.5
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
+..+|..+|.+++||||+++++ ++.++. .+++||||.+++|.+++......+++..++.++.||+.||.|||++||
T Consensus 47 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i 122 (292)
T 3o0g_A 47 SALREICLLKELKHKNIVRLHD-VLHSDK---KLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNV 122 (292)
T ss_dssp HHHHHHHHHTTCCCTTBCCEEE-EEEETT---EEEEEEECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHhcCCCCCEeeEEe-EEEeCC---EEEEEEecCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 4457888999999999999999 555443 689999997778888886655669999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.+||+|||.+...+.+..
T Consensus 123 vH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~---------------------------------------------- 156 (292)
T 3o0g_A 123 LHRDLKPQNLLINRNGELKLANFGLARAFGIPVR---------------------------------------------- 156 (292)
T ss_dssp ECCCCSGGGEEECTTSCEEECCCTTCEECCSCCS----------------------------------------------
T ss_pred ecCCCCHHHEEEcCCCCEEEeecccceecCCccc----------------------------------------------
Confidence 9999999999999999999999998844321100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC-CCccccchhhhchh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLL 301 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGvll 301 (720)
......||+.|+|||++.+.. ++.++|||||||++
T Consensus 157 --------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il 192 (292)
T 3o0g_A 157 --------------------------------------------CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIF 192 (292)
T ss_dssp --------------------------------------------CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHH
T ss_pred --------------------------------------------cccCCccccCCcChHHHcCCCCcCchHHHHHHHHHH
Confidence 001146799999999998776 89999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhc--CCCCcc-------------------------c-cccCchHHHHHHHcCCCCCC
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRH--RVLPPQ-------------------------L-LLKFPKEASFCLWLLHPEPS 350 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~--~~~p~~-------------------------~-~~~~p~~~~Li~~~L~~dP~ 350 (720)
|||++ ||............+.. +..++. . ....+...+||.+||++||+
T Consensus 193 ~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~ 272 (292)
T 3o0g_A 193 AELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPV 272 (292)
T ss_dssp HHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGG
T ss_pred HHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccccccccccccCCcchhhcccccChHHHHHHHHHhccChh
Confidence 99997 54444333333333221 000000 0 11223445999999999999
Q ss_pred CCCChHHHHcCcccCCC
Q 004989 351 GRPKMGELLQSEFLNEP 367 (720)
Q Consensus 351 ~Rpta~eiL~hp~~~~~ 367 (720)
+|||++|+|+||||+..
T Consensus 273 ~R~t~~e~l~hp~f~~~ 289 (292)
T 3o0g_A 273 QRISAEEALQHPYFSDF 289 (292)
T ss_dssp GSCCHHHHHTSGGGTTC
T ss_pred hCCCHHHHhcCcccccC
Confidence 99999999999999875
No 24
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=9.2e-36 Score=315.18 Aligned_cols=210 Identities=15% Similarity=0.186 Sum_probs=168.8
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++.+++||||+++++ ++..+. .+|+|||| .|++|.+++... .+++.+++.++.||+.||.|||++||
T Consensus 64 ~~~E~~~l~~l~hp~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i 137 (297)
T 3fxz_A 64 IINEILVMRENKNPNIVNYLD-SYLVGD---ELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSNQV 137 (297)
T ss_dssp HHHHHHHHHHCCCTTBCCEEE-EEEETT---EEEEEEECCTTCBHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHhcCCCCCCCeEeE-EEEECC---EEEEEEECCCCCCHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 346778999999999999999 554443 57999999 899999999654 38999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.+||+|||++........
T Consensus 138 ~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~---------------------------------------------- 171 (297)
T 3fxz_A 138 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS---------------------------------------------- 171 (297)
T ss_dssp ECCCCSGGGEEECTTCCEEECCCTTCEECCSTTC----------------------------------------------
T ss_pred eeCCCCHHHEEECCCCCEEEeeCCCceecCCccc----------------------------------------------
Confidence 9999999999999999999999998743211100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......||+.|+|||++.+..++.++|||||||++|
T Consensus 172 --------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ 207 (297)
T 3fxz_A 172 --------------------------------------------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAI 207 (297)
T ss_dssp --------------------------------------------CBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHH
T ss_pred --------------------------------------------ccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHH
Confidence 001147899999999999999999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCCCccccccCch-HHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004989 303 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~-~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
||++ ||..........................+. ..+||.+||++||.+|||+.|+|+||||+....
T Consensus 208 ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~ 278 (297)
T 3fxz_A 208 EMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQFLKIAKP 278 (297)
T ss_dssp HHHHSSCTTTTSCHHHHHHHHHHHCSCCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCCC
T ss_pred HHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhcccCc
Confidence 9999 776665554444433333333333334444 459999999999999999999999999997643
No 25
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=4.9e-36 Score=319.26 Aligned_cols=208 Identities=22% Similarity=0.288 Sum_probs=164.9
Q ss_pred hchhhhhhccc-CCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTH-GDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~-l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+...|...+.. .+||||+++++ ++.++. .+|+||||.+++|.+++...+..+++..++.|+.||+.||.|||++|
T Consensus 102 ~~~~e~~~~~~~~~h~~iv~l~~-~~~~~~---~~~lv~e~~~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ 177 (311)
T 3p1a_A 102 RKLAEVGSHEKVGQHPCCVRLEQ-AWEEGG---ILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQG 177 (311)
T ss_dssp HHHHHHHHHHHHCCCTTBCCEEE-EEEETT---EEEEEEECCCCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhcCCCcEEEEEE-EEEeCC---EEEEEEeccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 44445444444 48999999999 555443 68999999888999999665666999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||++...+...
T Consensus 178 ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~---------------------------------------------- 211 (311)
T 3p1a_A 178 LVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAG---------------------------------------------- 211 (311)
T ss_dssp EECCCCSGGGEEECGGGCEEECCCTTCEECC-------------------------------------------------
T ss_pred EecCCCCHHHEEECCCCCEEEccceeeeecccCC----------------------------------------------
Confidence 9999999999999999999999998874322110
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......||+.|+|||++.+ .++.++|||||||++
T Consensus 212 ---------------------------------------------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il 245 (311)
T 3p1a_A 212 ---------------------------------------------AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTI 245 (311)
T ss_dssp ------------------------------------------------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHH
T ss_pred ---------------------------------------------CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHH
Confidence 0011368999999999987 599999999999999
Q ss_pred hhccccCCCCchHHHHHHHhhcCCCCccccccCchH-HHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 302 FELFCPFSTGEEKTRTMSSLRHRVLPPQLLLKFPKE-ASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLltpf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~-~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|||+++....... .....+.....++.+....+.. .+||.+||++||.+|||+.|+|+||||+++
T Consensus 246 ~el~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~~~~p 311 (311)
T 3p1a_A 246 LEVACNMELPHGG-EGWQQLRQGYLPPEFTAGLSSELRSVLVMMLEPDPKLRATAEALLALPVLRQP 311 (311)
T ss_dssp HHHHHTCCCCSSH-HHHHHHTTTCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGSCC
T ss_pred HHHHhCCCCCCCc-cHHHHHhccCCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHHhCccccCC
Confidence 9999943322222 2344556666676666655555 499999999999999999999999999864
No 26
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=8.7e-36 Score=317.46 Aligned_cols=212 Identities=16% Similarity=0.212 Sum_probs=164.1
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
+..+|..+|.+++||||+++++ ++.++. .+++||||.+++|.+++......+++.+++.++.||+.||.|||++||
T Consensus 65 ~~~~E~~~l~~l~hp~iv~~~~-~~~~~~---~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i 140 (311)
T 3niz_A 65 TAIREISLLKELHHPNIVSLID-VIHSER---CLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRI 140 (311)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EECCSS---CEEEEEECCSEEHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHHHcCCCCEeeeee-EEccCC---EEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 3447888999999999999999 555443 679999996679999997766679999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.+||+|||++...+....
T Consensus 141 vH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~---------------------------------------------- 174 (311)
T 3niz_A 141 LHRDLKPQNLLINSDGALKLADFGLARAFGIPVR---------------------------------------------- 174 (311)
T ss_dssp ECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC----------------------------------------------
T ss_pred ccCCCchHhEEECCCCCEEEccCcCceecCCCcc----------------------------------------------
Confidence 9999999999999999999999998844321100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC-CCCccccchhhhchh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLL 301 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGvll 301 (720)
......||+.|+|||++.+. .++.++|||||||++
T Consensus 175 --------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il 210 (311)
T 3niz_A 175 --------------------------------------------SYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIF 210 (311)
T ss_dssp -----------------------------------------------CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHH
T ss_pred --------------------------------------------cccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHH
Confidence 00113679999999999874 489999999999999
Q ss_pred hhccc---cCCCCchHHH--HHHHhhcCCCCcc-------------------------c-cccCchHHHHHHHcCCCCCC
Q 004989 302 FELFC---PFSTGEEKTR--TMSSLRHRVLPPQ-------------------------L-LLKFPKEASFCLWLLHPEPS 350 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~--~~~~l~~~~~p~~-------------------------~-~~~~p~~~~Li~~~L~~dP~ 350 (720)
|+|++ ||........ .+..+.....+.. . ....+...+||.+||++||.
T Consensus 211 ~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~ 290 (311)
T 3niz_A 211 AEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPN 290 (311)
T ss_dssp HHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTT
T ss_pred HHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChh
Confidence 99999 6765433221 1111111111111 0 11223445999999999999
Q ss_pred CCCChHHHHcCcccCCCc
Q 004989 351 GRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 351 ~Rpta~eiL~hp~~~~~~ 368 (720)
+|||+.|+|+||||+...
T Consensus 291 ~Rpt~~ell~hp~f~~~~ 308 (311)
T 3niz_A 291 KRISARDAMNHPYFKDLD 308 (311)
T ss_dssp TSCCHHHHHTSGGGTTSC
T ss_pred HCCCHHHHhcCcccccCC
Confidence 999999999999999863
No 27
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=1.3e-35 Score=333.95 Aligned_cols=214 Identities=18% Similarity=0.204 Sum_probs=162.1
Q ss_pred hhchhhhhhcccCCCCCceecccceeecCC---CCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 004989 62 LRKHSDGVELTHGDHLRNQGGLSGVCENEA---AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 62 ~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~---~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
.+..+|..+|..++|||||++++ ++.... ....+|+||||.+++|.+.+.. .+++.+++.+++||+.||+|||
T Consensus 106 ~~~~~E~~~l~~l~hpnIv~l~~-~~~~~~~~~~~~~~~lv~E~~~~~l~~~~~~---~l~~~~~~~~~~qil~aL~~lH 181 (464)
T 3ttj_A 106 KRAYRELVLMKCVNHKNIISLLN-VFTPQKTLEEFQDVYLVMELMDANLCQVIQM---ELDHERMSYLLYQMLCGIKHLH 181 (464)
T ss_dssp HHHHHHHHHHHHCCCTTBCCCSE-EECSCCSTTTCCEEEEEEECCSEEHHHHHTS---CCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCCcEEE-EEccCCccccCCeEEEEEeCCCCCHHHHHhh---cCCHHHHHHHHHHHHHHHHHHH
Confidence 35558889999999999999999 554332 2346899999977788888843 3899999999999999999999
Q ss_pred HCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCC
Q 004989 139 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
++||+||||||+|||++.++.+||+|||+++..+...
T Consensus 182 ~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~------------------------------------------- 218 (464)
T 3ttj_A 182 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF------------------------------------------- 218 (464)
T ss_dssp HTTCCCCCCCGGGEEECTTSCEEECCCCCC-----CC-------------------------------------------
T ss_pred HCCcccCCCChHhEEEeCCCCEEEEEEEeeeecCCCc-------------------------------------------
Confidence 9999999999999999999999999998874321110
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhh
Q 004989 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
.....+||++|+|||++.+..|+.++||||||
T Consensus 219 ------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG 250 (464)
T 3ttj_A 219 ------------------------------------------------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 250 (464)
T ss_dssp ------------------------------------------------CC----CCCTTCCHHHHTTCCCCTTHHHHHHH
T ss_pred ------------------------------------------------ccCCCcccccccCHHHHcCCCCCHHHHHHHHH
Confidence 00114789999999999999999999999999
Q ss_pred chhhhccc---cCCCCchHHHHHHHhhc-CCCCccc-----------------------ccc----------------Cc
Q 004989 299 VLLFELFC---PFSTGEEKTRTMSSLRH-RVLPPQL-----------------------LLK----------------FP 335 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~-~~~p~~~-----------------------~~~----------------~p 335 (720)
|++|||++ ||.+..........+.. +..++.+ ... .+
T Consensus 251 ~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 330 (464)
T 3ttj_A 251 CIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKAS 330 (464)
T ss_dssp HHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHH
T ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCH
Confidence 99999999 77665443322222211 0000000 000 12
Q ss_pred hHHHHHHHcCCCCCCCCCChHHHHcCcccCCCccc
Q 004989 336 KEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 336 ~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
...+||.+||++||.+|||++|+|+||||+...++
T Consensus 331 ~~~dLl~~mL~~dP~~R~ta~e~L~Hp~~~~~~~~ 365 (464)
T 3ttj_A 331 QARDLLSKMLVIDPAKRISVDDALQHPYINVWYDP 365 (464)
T ss_dssp HHHHHHHHHSCSSTTTSCCHHHHHTSTTTGGGCCH
T ss_pred HHHHHHHHHcCCChhhCCCHHHHhcChhhhhccCc
Confidence 34599999999999999999999999999976543
No 28
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=3.1e-35 Score=311.96 Aligned_cols=210 Identities=19% Similarity=0.248 Sum_probs=157.1
Q ss_pred hhhhhccc---CCCCCceecccceeecCC--CCCcEEEEEecCCCCHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHH
Q 004989 66 SDGVELTH---GDHLRNQGGLSGVCENEA--AIDPFVHAIEWGDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 66 ~e~~~L~~---l~HpnIV~l~~~~~~~~~--~~~~~~lv~E~~ggsL~~~L~~~~-~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
+|..++.+ ++||||+++++ ++.... ....++++|||.+++|.+++.... ..+++.+++.++.||+.||.|||+
T Consensus 60 ~e~~~l~~l~~~~h~niv~~~~-~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~ 138 (308)
T 3g33_A 60 REVALLRRLEAFEHPNVVRLMD-VCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHA 138 (308)
T ss_dssp HHHHHHHHHHHHCCTTBCCEEE-EEEECCSSSEEEEEEEEECCCCBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhcCCCCeEEeee-eeeccCCCCceeEEEEehhhhcCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 44445544 55999999999 444332 223579999997789999995543 349999999999999999999999
Q ss_pred CCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCC
Q 004989 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||+||||||+|||++.++.+||+|||.+...+...
T Consensus 139 ~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~-------------------------------------------- 174 (308)
T 3g33_A 139 NCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQM-------------------------------------------- 174 (308)
T ss_dssp TTCCCSCCCTTTEEECTTSCEEECSCSCTTTSTTCC--------------------------------------------
T ss_pred CCcccCCCCHHHEEEcCCCCEEEeeCccccccCCCc--------------------------------------------
Confidence 999999999999999999999999999874321110
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhc
Q 004989 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
......||+.|+|||++.+..++.++|||||||
T Consensus 175 -----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~ 207 (308)
T 3g33_A 175 -----------------------------------------------ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGC 207 (308)
T ss_dssp -----------------------------------------------CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHH
T ss_pred -----------------------------------------------ccCCccccccccCchHHcCCCCCchHHHHHHHH
Confidence 001146899999999999988999999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhc-CCCCcc-----------------------ccccC-chHHHHHHHcCCCCCCC
Q 004989 300 LLFELFC---PFSTGEEKTRTMSSLRH-RVLPPQ-----------------------LLLKF-PKEASFCLWLLHPEPSG 351 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~-~~~p~~-----------------------~~~~~-p~~~~Li~~~L~~dP~~ 351 (720)
++|||++ ||............+.. +..++. ..... +...+||.+||++||.+
T Consensus 208 il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~ 287 (308)
T 3g33_A 208 IFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHK 287 (308)
T ss_dssp HHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTT
T ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCcc
Confidence 9999999 66665544332222211 111100 11122 33459999999999999
Q ss_pred CCChHHHHcCcccCCC
Q 004989 352 RPKMGELLQSEFLNEP 367 (720)
Q Consensus 352 Rpta~eiL~hp~~~~~ 367 (720)
|||+.|+|+||||+..
T Consensus 288 R~t~~e~l~h~~~~~~ 303 (308)
T 3g33_A 288 RISAFRALQHSYLHKD 303 (308)
T ss_dssp SCCHHHHHTSTTC---
T ss_pred CCCHHHHhcCccccCC
Confidence 9999999999999975
No 29
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=1.8e-35 Score=310.93 Aligned_cols=211 Identities=17% Similarity=0.240 Sum_probs=161.1
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
+..+|..+|.+++||||+++++ ++.... .+|+||||.+++|.+++......+++..++.++.||+.||.|||++||
T Consensus 46 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i 121 (288)
T 1ob3_A 46 TTIREISILKELKHSNIVKLYD-VIHTKK---RLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRV 121 (288)
T ss_dssp HHHHHHHGGGGCCCTTBCCEEE-EEECSS---CEEEEEECCSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred hHHHHHHHHHhcCCCCEeeeee-EEccCC---eEEEEEEecCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 3347888999999999999999 555443 689999996679999997665669999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.+||+|||.+...+....
T Consensus 122 ~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~---------------------------------------------- 155 (288)
T 1ob3_A 122 LHRDLKPQNLLINREGELKIADFGLARAFGIPVR---------------------------------------------- 155 (288)
T ss_dssp CCSCCCGGGEEECTTSCEEECCTTHHHHHCC-------------------------------------------------
T ss_pred ecCCCCHHHEEEcCCCCEEEeECccccccCcccc----------------------------------------------
Confidence 9999999999999999999999988743211100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC-CCccccchhhhchh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLL 301 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGvll 301 (720)
......||+.|+|||++.+.. ++.++|||||||++
T Consensus 156 --------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il 191 (288)
T 1ob3_A 156 --------------------------------------------KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIF 191 (288)
T ss_dssp --------------------------------------------------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHH
T ss_pred --------------------------------------------ccccccccccccCchheeCCCCCCcHHHHHHHHHHH
Confidence 001136799999999997654 89999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhc--CCC-------------Cc-----------cccccCc-hHHHHHHHcCCCCCCC
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRH--RVL-------------PP-----------QLLLKFP-KEASFCLWLLHPEPSG 351 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~--~~~-------------p~-----------~~~~~~p-~~~~Li~~~L~~dP~~ 351 (720)
|||++ ||............... ... .+ .+....+ ...+||.+||++||++
T Consensus 192 ~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~ 271 (288)
T 1ob3_A 192 AEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQ 271 (288)
T ss_dssp HHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTT
T ss_pred HHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCccc
Confidence 99999 67665444333222211 000 00 0111223 3459999999999999
Q ss_pred CCChHHHHcCcccCCC
Q 004989 352 RPKMGELLQSEFLNEP 367 (720)
Q Consensus 352 Rpta~eiL~hp~~~~~ 367 (720)
|||+.|+|+||||++.
T Consensus 272 Rpt~~e~l~hp~f~~~ 287 (288)
T 1ob3_A 272 RITAKQALEHAYFKEN 287 (288)
T ss_dssp SCCHHHHHTSGGGGC-
T ss_pred CCCHHHHhcCcchhhc
Confidence 9999999999999863
No 30
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=1.9e-35 Score=316.31 Aligned_cols=202 Identities=14% Similarity=0.182 Sum_probs=164.6
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..+|..++||||+++++ ++.+.. .+|+|||| .|++|.+++.+.. .+++..++.++.||+.||.|||++||+
T Consensus 54 ~~E~~~l~~l~hp~Iv~~~~-~~~~~~---~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~iv 128 (318)
T 1fot_A 54 NDERLMLSIVTHPFIIRMWG-TFQDAQ---QIFMIMDYIEGGELFSLLRKSQ-RFPNPVAKFYAAEVCLALEYLHSKDII 128 (318)
T ss_dssp HHHHHHHHSCCBTTBCCEEE-EEECSS---EEEEEECCCCSCBHHHHHHHTS-SCCHHHHHHHHHHHHHHHHHHHTTTEE
T ss_pred HHHHHHHhhCCCCCCceEeE-EEEeCC---EEEEEEeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 36777899999999999999 555543 68999999 8999999996544 499999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.+|++||+|||++......
T Consensus 129 HrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~------------------------------------------------- 159 (318)
T 1fot_A 129 YRDLKPENILLDKNGHIKITDFGFAKYVPDV------------------------------------------------- 159 (318)
T ss_dssp CCCCCGGGEEECTTSCEEECCCSSCEECSSC-------------------------------------------------
T ss_pred ccCCChheEEEcCCCCEEEeecCcceecCCc-------------------------------------------------
Confidence 9999999999999999999998887321100
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
....+||+.|+|||++.+..++.++|||||||++||
T Consensus 160 --------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e 195 (318)
T 1fot_A 160 --------------------------------------------TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYE 195 (318)
T ss_dssp --------------------------------------------BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHH
T ss_pred --------------------------------------------cccccCCccccCHhHhcCCCCCcccchhhhHHHHHH
Confidence 001478999999999999999999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCCCcccccc-CchHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC
Q 004989 304 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLK-FPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~~p~~~~~~-~p~~~~Li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~ 367 (720)
|++ ||...... ..+..+....+. ++.. .+...+||.+||..||.+|| +++++++||||+..
T Consensus 196 ll~g~~pf~~~~~~-~~~~~i~~~~~~--~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~hp~f~~~ 265 (318)
T 1fot_A 196 MLAGYTPFYDSNTM-KTYEKILNAELR--FPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEV 265 (318)
T ss_dssp HHHSSCTTCCSSHH-HHHHHHHHCCCC--CCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGGSSC
T ss_pred HHhCCCCCCCCCHH-HHHHHHHhCCCC--CCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcCccccCC
Confidence 999 67665444 333333333221 1122 34456999999999999999 89999999999976
No 31
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.6e-35 Score=321.44 Aligned_cols=213 Identities=16% Similarity=0.251 Sum_probs=165.1
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCC---CCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAA---IDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~---~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
+..+|..+|.+++||||+++++ ++..... ...+|+||||.|++|.+++... .+++..++.++.||+.||.|||+
T Consensus 70 ~~~~E~~~l~~l~hpnIv~l~~-~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~--~l~~~~~~~~~~qi~~~L~~LH~ 146 (367)
T 1cm8_A 70 RAYRELRLLKHMRHENVIGLLD-VFTPDETLDDFTDFYLVMPFMGTDLGKLMKHE--KLGEDRIQFLVYQMLKGLRYIHA 146 (367)
T ss_dssp HHHHHHHHHHHCCBTTBCCCSE-EECSCSSTTTCCCCEEEEECCSEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCcCCCCcee-eEecCCccccCceEEEEEecCCCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH
Confidence 4558899999999999999999 5544322 2457999999999999999653 49999999999999999999999
Q ss_pred CCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCC
Q 004989 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||+||||||+|||++.++.+||+|||+++..+..
T Consensus 147 ~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~--------------------------------------------- 181 (367)
T 1cm8_A 147 AGIIHRDLKPGNLAVNEDCELKILDFGLARQADSE--------------------------------------------- 181 (367)
T ss_dssp TTEECCCCCGGGEEECTTCCEEECCCTTCEECCSS---------------------------------------------
T ss_pred CCccccCcCHHHEEEcCCCCEEEEeeecccccccc---------------------------------------------
Confidence 99999999999999999999999998887432110
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC-CCCCccccchhhh
Q 004989 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLG 298 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sDIwSLG 298 (720)
....+||++|+|||++.+ ..++.++||||||
T Consensus 182 ------------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG 213 (367)
T 1cm8_A 182 ------------------------------------------------MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVG 213 (367)
T ss_dssp ------------------------------------------------CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHH
T ss_pred ------------------------------------------------cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHH
Confidence 011468999999999987 5699999999999
Q ss_pred chhhhccc---cCCCCchHHHHHHHhhc-CCCCc----------------------------cccccCchHHHHHHHcCC
Q 004989 299 VLLFELFC---PFSTGEEKTRTMSSLRH-RVLPP----------------------------QLLLKFPKEASFCLWLLH 346 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~-~~~p~----------------------------~~~~~~p~~~~Li~~~L~ 346 (720)
|++|||++ ||.+..........+.. +..+. .+....+...+|+.+||+
T Consensus 214 ~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~ 293 (367)
T 1cm8_A 214 CIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLV 293 (367)
T ss_dssp HHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSC
T ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHcc
Confidence 99999999 67665443222222111 11111 111223455699999999
Q ss_pred CCCCCCCChHHHHcCcccCCCccch
Q 004989 347 PEPSGRPKMGELLQSEFLNEPRDSM 371 (720)
Q Consensus 347 ~dP~~Rpta~eiL~hp~~~~~~~~l 371 (720)
.||.+|||+.|+|+||||+...+..
T Consensus 294 ~dP~~R~t~~e~l~hp~f~~~~~~~ 318 (367)
T 1cm8_A 294 LDAEQRVTAGEALAHPYFESLHDTE 318 (367)
T ss_dssp SSTTTSCCHHHHHHSGGGTTTC---
T ss_pred CChhHCCCHHHHhcChHHHhhcCCc
Confidence 9999999999999999999875543
No 32
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.6e-35 Score=325.08 Aligned_cols=237 Identities=16% Similarity=0.195 Sum_probs=167.6
Q ss_pred hhhchhhhhhcccCC-CCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004989 61 ELRKHSDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 61 ~~r~~~e~~~L~~l~-HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
..+..+|..+|.++. |||||++++ ++.... ...+|+||||.+++|.+++... .+++..++.++.||+.||.|||+
T Consensus 52 ~~~~~~E~~~l~~l~~h~niv~l~~-~~~~~~-~~~~~lv~e~~~~~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH~ 127 (388)
T 3oz6_A 52 AQRTFREIMILTELSGHENIVNLLN-VLRADN-DRDVYLVFDYMETDLHAVIRAN--ILEPVHKQYVVYQLIKVIKYLHS 127 (388)
T ss_dssp HHHHHHHHHHHHHTTTCTTBCCEEE-EEECTT-SSCEEEEEECCSEEHHHHHHHT--CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCCCCCCeeee-EEecCC-CCEEEEEecccCcCHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHh
Confidence 345558888999997 999999999 554332 2368999999778999999653 49999999999999999999999
Q ss_pred CCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCC
Q 004989 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||+||||||+|||++.++.+||+|||+++.......... ..
T Consensus 128 ~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~-----------------------------~~--------- 169 (388)
T 3oz6_A 128 GGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTN-----------------------------NI--------- 169 (388)
T ss_dssp TTEECCCCCGGGEEECTTCCEEECCCTTCEESSSCCCCCC-----------------------------CG---------
T ss_pred CCEEeCCCCHHHeEEcCCCCEEecCCcccccccccccccc-----------------------------cc---------
Confidence 9999999999999999999999999999865422110000 00
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC-CCCCccccchhhh
Q 004989 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLG 298 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sDIwSLG 298 (720)
+.......... ..........+||++|+|||++.+ ..|+.++||||||
T Consensus 170 -----------------~~~~~~~~~~~--------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG 218 (388)
T 3oz6_A 170 -----------------PLSINENTENF--------------DDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLG 218 (388)
T ss_dssp -----------------GGCCC-----------------------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHH
T ss_pred -----------------ccccccccccc--------------ccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHH
Confidence 00000000000 000001123589999999999987 4589999999999
Q ss_pred chhhhccc---cCCCCchHHHHHHHhhcCCCCcc--------------------------------c-------------
Q 004989 299 VLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQ--------------------------------L------------- 330 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~--------------------------------~------------- 330 (720)
|++|||++ ||.+..........+.....|+. +
T Consensus 219 ~il~ell~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (388)
T 3oz6_A 219 CILGEILCGKPIFPGSSTMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPK 298 (388)
T ss_dssp HHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTT
T ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhccccccc
Confidence 99999999 67665544332222211111110 0
Q ss_pred cccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCccc
Q 004989 331 LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 331 ~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
....+...+||.+||.+||.+|||+.|+|+||||+....+
T Consensus 299 ~~~~~~~~dll~~~L~~dP~~R~t~~e~l~Hp~~~~~~~~ 338 (388)
T 3oz6_A 299 ADCNEEALDLLDKLLQFNPNKRISANDALKHPFVSIFHNP 338 (388)
T ss_dssp CCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSTTTTTTCCG
T ss_pred ccCCHHHHHHHHHhhccCcccCCCHHHHhCCHHHHHhcCC
Confidence 0223455699999999999999999999999999876554
No 33
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.5e-35 Score=320.79 Aligned_cols=209 Identities=20% Similarity=0.323 Sum_probs=161.8
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++||||+++++ +++... .+|+|||| .|++|.+++...+ .+++.+++.++.||+.||.|||++|
T Consensus 54 ~~~~Ei~~l~~l~hpnIv~l~~-~~~~~~---~~~lv~E~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH~~g 128 (347)
T 3zgw_A 54 RIKTEIEALKNLRHQHICQLYH-VLETAN---KIFMVLEYCPGGELFDYIISQD-RLSEEETRVVFRQIVSAVAYVHSQG 128 (347)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEE-EEECSS---EEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCEeeEEE-EEEeCC---EEEEEEeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 4457888999999999999999 565543 57999999 7999999995543 4999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||++....... +.
T Consensus 129 ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~---------------------------------~~----------- 164 (347)
T 3zgw_A 129 YAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNK---------------------------------DY----------- 164 (347)
T ss_dssp CBCCCCCGGGEEECTTSCEEECCCTTCBC---------------------------------------------------
T ss_pred eEeCCccHHHEEEcCCCCEEEEeccCcccccCCC---------------------------------Cc-----------
Confidence 9999999999999999999999999874321110 00
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCC-Cccccchhhhch
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYRLGVL 300 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~-s~~sDIwSLGvl 300 (720)
.....+||+.|+|||++.+..+ +.++|||||||+
T Consensus 165 ---------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~i 199 (347)
T 3zgw_A 165 ---------------------------------------------HLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGIL 199 (347)
T ss_dssp ----------------------------------------------------CGGGCCHHHHTTC---CCHHHHHHHHHH
T ss_pred ---------------------------------------------cccccCCccCccCHHHHcCCCCCCcHhHHHHHHHH
Confidence 0011478999999999998875 899999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
+|+|++ ||...... .....+..+.++. .....+...+||.+||.+||.+|||+.|+++||||...
T Consensus 200 l~ell~g~~Pf~~~~~~-~~~~~i~~~~~~~-p~~~s~~~~~li~~~L~~dP~~Rps~~eil~hp~~~~~ 267 (347)
T 3zgw_A 200 LYVLMCGFLPFDDDNVM-ALYKKIMRGKYDV-PKWLSPSSILLLQQMLQVDPKKRISMKNLLNHPWIMQD 267 (347)
T ss_dssp HHHHHHSSCSSCCSSHH-HHHHHHHHTCCCC-CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHTCHHHHTT
T ss_pred HHHHHHCCCCCCCCCHH-HHHHHHHcCCCCC-CCCCCHHHHHHHHHHcccCHhHCcCHHHHhcCcchhcC
Confidence 999999 67665444 3344444333221 11123455699999999999999999999999999875
No 34
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.2e-35 Score=314.38 Aligned_cols=208 Identities=18% Similarity=0.267 Sum_probs=166.0
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++||||+++++ ++.+.. .+|+|||| .|++|.+++... ..+++.+++.++.||+.||.|||++|
T Consensus 60 ~~~~E~~~l~~l~hp~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~al~~lH~~~ 134 (326)
T 2y0a_A 60 DIEREVSILKEIQHPNVITLHE-VYENKT---DVILILELVAGGELFDFLAEK-ESLTEEEATEFLKQILNGVYYLHSLQ 134 (326)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EEECSS---EEEEEEECCCSCBHHHHHTTS-SCCBHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCCCcEEE-EEEeCC---EEEEEEEcCCCCCHHHHHHhc-CCcCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3447888999999999999999 555543 57999999 799999999544 45999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCC----ceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCC
Q 004989 142 IVVHNVRPSCFVMSSFN----HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~----~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~ 217 (720)
|+||||||+|||++.++ .+||+|||++.......
T Consensus 135 ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~------------------------------------------ 172 (326)
T 2y0a_A 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN------------------------------------------ 172 (326)
T ss_dssp EECCCCCGGGEEESCSSSSSCCEEECCCTTCEECCTTS------------------------------------------
T ss_pred eEcCCCCHHHEEEecCCCCCCCEEEEECCCCeECCCCC------------------------------------------
Confidence 99999999999999877 79999888874321100
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhh
Q 004989 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRL 297 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSL 297 (720)
......||+.|+|||++.+..++.++|||||
T Consensus 173 -------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Diwsl 203 (326)
T 2y0a_A 173 -------------------------------------------------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSI 203 (326)
T ss_dssp -------------------------------------------------CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHH
T ss_pred -------------------------------------------------ccccccCCcCcCCceeecCCCCCcHHHHHHH
Confidence 0011468999999999998889999999999
Q ss_pred hchhhhccc---cCCCCchHHHHHHHhhc--CCCCccccccCch-HHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 298 GVLLFELFC---PFSTGEEKTRTMSSLRH--RVLPPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 298 Gvll~eLlt---pf~~~~~~~~~~~~l~~--~~~p~~~~~~~p~-~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
||++|+|++ ||...... .....+.. ..+++......+. ..+||.+||.+||.+|||+.|+|+||||...
T Consensus 204 G~il~~ll~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~ 278 (326)
T 2y0a_A 204 GVITYILLSGASPFLGDTKQ-ETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPK 278 (326)
T ss_dssp HHHHHHHHHSCCSSCCSSHH-HHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHSTTTSCC
T ss_pred HHHHHHHHHCcCCCCCCCHH-HHHHHHHhcCCCcCccccccCCHHHHHHHHHHccCChhhCCCHHHHhcCCCccCC
Confidence 999999999 67655443 33333332 2233333334444 4599999999999999999999999999875
No 35
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.3e-35 Score=317.90 Aligned_cols=209 Identities=19% Similarity=0.252 Sum_probs=168.0
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..+|..++||||+++++ ++++.. .+|+|||| .|++|.+++......+++.+++.++.||+.||.|||++||
T Consensus 48 ~~~E~~~l~~l~hpnIv~~~~-~~~~~~---~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gi 123 (321)
T 1tki_A 48 VKKEISILNIARHRNILHLHE-SFESME---ELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNI 123 (321)
T ss_dssp HHHHHHHHHHSCCTTBCCEEE-EEEETT---EEEEEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHhCCCCCCCeEeE-EEecCC---EEEEEEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCC
Confidence 347888999999999999999 555543 68999999 8899999997666669999999999999999999999999
Q ss_pred eeccCCCCcEEEcc--CCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 143 VVHNVRPSCFVMSS--FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 143 vHrDLKP~NILl~~--~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
+||||||+|||++. ++.+||+|||++.......
T Consensus 124 vH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~--------------------------------------------- 158 (321)
T 1tki_A 124 GHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD--------------------------------------------- 158 (321)
T ss_dssp ECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTC---------------------------------------------
T ss_pred CcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCC---------------------------------------------
Confidence 99999999999986 7899999888874321100
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhch
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
......||+.|+|||++.+..++.++|||||||+
T Consensus 159 ----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~i 192 (321)
T 1tki_A 159 ----------------------------------------------NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTL 192 (321)
T ss_dssp ----------------------------------------------EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHH
T ss_pred ----------------------------------------------ccccccCChhhcCcHHhcCCCCCchhhHHHHHHH
Confidence 0011468999999999998889999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCC--CccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004989 301 LFELFC---PFSTGEEKTRTMSSLRHRVL--PPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~--p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
+|+|++ ||...... ..+..+..... ++......+ ...+|+.+||++||.+|||+.|+|+||||+...
T Consensus 193 l~~ll~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~hp~~~~~~ 265 (321)
T 1tki_A 193 VYVLLSGINPFLAETNQ-QIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQKI 265 (321)
T ss_dssp HHHHHHSSCTTCCSSHH-HHHHHHHHTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHSCG
T ss_pred HHHHHhCCCCCcCCCHH-HHHHHHHcCCCCCChhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhcChhhccCc
Confidence 999999 67665544 33444443332 222333344 445999999999999999999999999998763
No 36
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=3.8e-35 Score=316.47 Aligned_cols=207 Identities=18% Similarity=0.262 Sum_probs=165.9
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|..++||||+++++ ++.+.. .+|+|||| .|++|.+++.+.+ .+++..++.++.||+.||.|||++|
T Consensus 51 ~~~~E~~~l~~l~hp~iv~l~~-~~~~~~---~~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~ 125 (337)
T 1o6l_A 51 HTVTESRVLQNTRHPFLTALKY-AFQTHD---RLCFVMEYANGGELFFHLSRER-VFTEERARFYGAEIVSALEYLHSRD 125 (337)
T ss_dssp HHHHHHHHHHSCCCTTBCCEEE-EEECSS---EEEEEEECCTTCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCcCcceEE-EEEeCC---EEEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3446778899999999999999 555543 68999999 8999999995543 4999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.+|++||+|||+++.......
T Consensus 126 ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~--------------------------------------------- 160 (337)
T 1o6l_A 126 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA--------------------------------------------- 160 (337)
T ss_dssp CBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTC---------------------------------------------
T ss_pred eecCcCCHHHEEECCCCCEEEeeccchhhcccCCC---------------------------------------------
Confidence 99999999999999999999999998743211100
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
.....+||+.|+|||++.+..++.++|||||||++
T Consensus 161 ---------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il 195 (337)
T 1o6l_A 161 ---------------------------------------------TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVM 195 (337)
T ss_dssp ---------------------------------------------CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHH
T ss_pred ---------------------------------------------cccccccChhhCChhhhcCCCCCchhhcccchhHH
Confidence 00114789999999999998899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCcccccc-CchHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLK-FPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~-~p~~~~Li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~ 367 (720)
|||++ ||...... .....+....+. ++.. .+...+||.+||+.||.+|| ++.|+++||||...
T Consensus 196 ~ell~g~~Pf~~~~~~-~~~~~i~~~~~~--~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h~~f~~~ 267 (337)
T 1o6l_A 196 YEMMCGRLPFYNQDHE-RLFELILMEEIR--FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSI 267 (337)
T ss_dssp HHHHHSSCSSCCSSHH-HHHHHHHHCCCC--CCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTC
T ss_pred HHHhcCCCCCCCCCHH-HHHHHHHcCCCC--CCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcCCCcCCC
Confidence 99999 77665443 333333332211 1222 34556999999999999999 89999999999876
No 37
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=3.5e-35 Score=319.84 Aligned_cols=208 Identities=19% Similarity=0.221 Sum_probs=165.3
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++|||||++++ ++.+.. .+|+|||| .|++|.+++... ..+++.+++.++.||+.||.|||++|
T Consensus 74 ~~~~E~~il~~l~hpnIv~~~~-~~~~~~---~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~al~~lH~~~ 148 (362)
T 2bdw_A 74 KLEREARICRKLQHPNIVRLHD-SIQEES---FHYLVFDLVTGGELFEDIVAR-EFYSEADASHCIQQILESIAYCHSNG 148 (362)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EEECSS---EEEEEECCCCSCBHHHHHTTC-SCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCCCeEEE-EEEeCC---EEEEEEecCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 4457888999999999999999 555543 57999999 889999999554 35999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCC---ceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCC
Q 004989 142 IVVHNVRPSCFVMSSFN---HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~---~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
|+||||||+|||++.++ .+||+|||++.......
T Consensus 149 ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~------------------------------------------- 185 (362)
T 2bdw_A 149 IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE------------------------------------------- 185 (362)
T ss_dssp CBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTCC-------------------------------------------
T ss_pred eEeccCchHHEEEecCCCCCCEEEeecCcceEecCCc-------------------------------------------
Confidence 99999999999998654 59999888874321110
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhh
Q 004989 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
......||+.|+|||++.+..++.++||||||
T Consensus 186 ------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG 217 (362)
T 2bdw_A 186 ------------------------------------------------AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACG 217 (362)
T ss_dssp ------------------------------------------------SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHH
T ss_pred ------------------------------------------------ccccCCCCccccCHHHHccCCCCchhhHHHHH
Confidence 00114689999999999998899999999999
Q ss_pred chhhhccc---cCCCCchHHHHHHHhhcCC--CCcccccc-CchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 299 VLLFELFC---PFSTGEEKTRTMSSLRHRV--LPPQLLLK-FPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~--~p~~~~~~-~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|++|+|++ ||...... .....+..+. ++...... .+...+||.+||++||.+|||+.++|+||||...
T Consensus 218 ~il~~ll~g~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~ 291 (362)
T 2bdw_A 218 VILYILLVGYPPFWDEDQH-RLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNR 291 (362)
T ss_dssp HHHHHHHHSSCSSCCSSHH-HHHHHHHHTCCCCCTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTSHHHHTH
T ss_pred HHHHHHHHCCCCCCCCCHH-HHHHHHHhCCCCCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcccCCC
Confidence 99999999 66655443 3444444332 23333333 3445599999999999999999999999999763
No 38
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=2.7e-35 Score=330.58 Aligned_cols=244 Identities=15% Similarity=0.194 Sum_probs=163.0
Q ss_pred hchhhhhhcccCCCCCceecccceeecC-CCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENE-AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~-~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++|||||++++++.... .....+|+||||.+++|.+++.... .+++..++.|++||+.||.|||++|
T Consensus 98 ~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~-~l~~~~~~~~~~qi~~aL~~LH~~~ 176 (458)
T 3rp9_A 98 RILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPV-YLTELHIKTLLYNLLVGVKYVHSAG 176 (458)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEECCCSEEHHHHHHSSC-CCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCCCceEEEEecCCcccCceEEEEEeccccchhhhcccCC-CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 4558899999999999999999443322 3335689999998899999996544 4999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
||||||||+||||+.++.+||+|||+++..+.......... .........+.+|+...
T Consensus 177 iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~------- 234 (458)
T 3rp9_A 177 ILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLP---------------ISPREDDMNLVTFPHTK------- 234 (458)
T ss_dssp CBCCCCCGGGEEECTTCCEEECCCTTCBCTTSCTTCCCCCC---------------------------------------
T ss_pred cCCCCCChhhEEECCCCCEeecccccchhccCccccccccc---------------cCccccccccccccccc-------
Confidence 99999999999999999999999999976543311100000 00000000000110000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCccccc-CCCCCccccchhhhch
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-GAPVSCASDIYRLGVL 300 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~-~~~~s~~sDIwSLGvl 300 (720)
......+..+||++|+|||++. +..|+.++|||||||+
T Consensus 235 -----------------------------------------~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~i 273 (458)
T 3rp9_A 235 -----------------------------------------NLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCI 273 (458)
T ss_dssp ---------------------------------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHH
T ss_pred -----------------------------------------cccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHH
Confidence 0000112368999999999864 5559999999999999
Q ss_pred hhhccc--------------cCCCCch-------------------HHHHHHHhhc--C--------------------C
Q 004989 301 LFELFC--------------PFSTGEE-------------------KTRTMSSLRH--R--------------------V 325 (720)
Q Consensus 301 l~eLlt--------------pf~~~~~-------------------~~~~~~~l~~--~--------------------~ 325 (720)
||||++ +|.+... ....+..+.. + .
T Consensus 274 l~elltg~~~~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~ 353 (458)
T 3rp9_A 274 FAELLNMIKENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRI 353 (458)
T ss_dssp HHHHHTTSTTTCSSGGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTT
T ss_pred HHHHHHhccccccccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHh
Confidence 999996 1222110 0000000000 0 0
Q ss_pred C--------CccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCccc
Q 004989 326 L--------PPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 326 ~--------p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
+ ...+....+...+||.+||.+||.+|||++|+|+||||+.....
T Consensus 354 ~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~Hp~f~~~~~~ 406 (458)
T 3rp9_A 354 FPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEVRIA 406 (458)
T ss_dssp SCCCCCCCGGGGSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTCCG
T ss_pred cCCCCCCCHHHHCCCCCHHHHHHHHHHhccCccccCCHHHHhcCHhhhhcCCC
Confidence 0 01112234455699999999999999999999999999987554
No 39
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=7.6e-36 Score=324.01 Aligned_cols=205 Identities=17% Similarity=0.280 Sum_probs=162.7
Q ss_pred hhhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 65 HSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
.+|..+|..+ +||||+++++ ++.+.. .+|+|||| .|++|.+++.+.. .+++.+++.|+.||+.||.|||++||
T Consensus 71 ~~E~~il~~~~~hp~Iv~l~~-~~~~~~---~~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~gi 145 (353)
T 3txo_A 71 MTEKRILSLARNHPFLTQLFC-CFQTPD---RLFFVMEFVNGGDLMFHIQKSR-RFDEARARFYAAEIISALMFLHDKGI 145 (353)
T ss_dssp HHHHHHHHHTTTCTTBCCEEE-EEECSS---EEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhccCCCceeeEEE-EEEeCC---EEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCC
Confidence 3666778776 7999999999 565554 58999999 8999999995543 49999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.+|++||+|||+++......
T Consensus 146 vHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~~----------------------------------------------- 178 (353)
T 3txo_A 146 IYRDLKLDNVLLDHEGHCKLADFGMCKEGICNG----------------------------------------------- 178 (353)
T ss_dssp BCCCCCGGGEEECTTSCEEECCCTTCBCSCC-------------------------------------------------
T ss_pred cccCCCHHHEEECCCCCEEEccccceeecccCC-----------------------------------------------
Confidence 999999999999999999999999874321100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......+||+.|+|||++.+..|+.++|||||||++|
T Consensus 179 -------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ 215 (353)
T 3txo_A 179 -------------------------------------------VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLY 215 (353)
T ss_dssp --------------------------------------------------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHH
T ss_pred -------------------------------------------ccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHH
Confidence 0001147899999999998888999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCC-CccccccCchHHHHHHHcCCCCCCCCCCh------HHHHcCcccCCC
Q 004989 303 ELFC---PFSTGEEKTRTMSSLRHRVL-PPQLLLKFPKEASFCLWLLHPEPSGRPKM------GELLQSEFLNEP 367 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~~-p~~~~~~~p~~~~Li~~~L~~dP~~Rpta------~eiL~hp~~~~~ 367 (720)
||++ ||...... ..+..+....+ .|. ...+...+||.+||.+||.+||++ .|+++||||+..
T Consensus 216 ell~G~~Pf~~~~~~-~~~~~i~~~~~~~p~--~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~hp~f~~~ 287 (353)
T 3txo_A 216 EMLCGHAPFEAENED-DLFEAILNDEVVYPT--WLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKEI 287 (353)
T ss_dssp HHHHSSCSSCCSSHH-HHHHHHHHCCCCCCT--TSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTSGGGTTC
T ss_pred HHHhCCCCCCCCCHH-HHHHHHHcCCCCCCC--CCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhCCcccCC
Confidence 9999 77765554 34444443322 121 123455699999999999999998 899999999986
No 40
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=6.8e-35 Score=306.48 Aligned_cols=211 Identities=14% Similarity=0.148 Sum_probs=171.5
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++||||+++++.+.........+|+|||| .+++|.+++... ..+++..++.++.||+.||.|||++|
T Consensus 71 ~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ 149 (290)
T 1t4h_A 71 RFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRF-KVMKIKVLRSWCRQILKGLQFLHTRT 149 (290)
T ss_dssp HHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHTSS
T ss_pred HHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEEEEecCCCCHHHHHHHc-cCCCHHHHHHHHHHHHHHHHHHHcCC
Confidence 4457888999999999999999444444444568999999 789999999553 34899999999999999999999999
Q ss_pred --ceeccCCCCcEEEc-cCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCC
Q 004989 142 --IVVHNVRPSCFVMS-SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 142 --IvHrDLKP~NILl~-~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
|+||||||+|||++ .++.+||+|||.+......
T Consensus 150 ~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~~-------------------------------------------- 185 (290)
T 1t4h_A 150 PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS-------------------------------------------- 185 (290)
T ss_dssp SCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTT--------------------------------------------
T ss_pred CCEEECCCCHHHEEEECCCCCEEEeeCCCccccccc--------------------------------------------
Confidence 99999999999998 7899999998887321110
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhh
Q 004989 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
......||+.|+|||++.+. ++.++||||||
T Consensus 186 ------------------------------------------------~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG 216 (290)
T 1t4h_A 186 ------------------------------------------------FAKAVIGTPEFMAPEMYEEK-YDESVDVYAFG 216 (290)
T ss_dssp ------------------------------------------------SBEESCSSCCCCCGGGGGTC-CCTHHHHHHHH
T ss_pred ------------------------------------------------ccccccCCcCcCCHHHHhcc-CCCcchHHHHH
Confidence 00114689999999998754 89999999999
Q ss_pred chhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 299 VLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|++|+|++ ||............+.....+..+....+ ...+||.+||+.||.+|||+.|+|+||||++.
T Consensus 217 ~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~f~~~ 289 (290)
T 1t4h_A 217 MCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQEE 289 (290)
T ss_dssp HHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC--
T ss_pred HHHHHHHhCCCCCCCcCcHHHHHHHHhccCCccccCCCCCHHHHHHHHHHccCChhhCCCHHHHhhCcccccC
Confidence 99999999 77776666666666766666666655554 45699999999999999999999999999864
No 41
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=3.7e-35 Score=318.23 Aligned_cols=203 Identities=13% Similarity=0.123 Sum_probs=165.8
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..+|..++||||+++++ ++.+.. .+|+|||| .|++|.+++.+.+ .+++..++.++.||+.||.|||++||
T Consensus 88 ~~~E~~~l~~l~hp~iv~~~~-~~~~~~---~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~i 162 (350)
T 1rdq_E 88 TLNEKRILQAVNFPFLVKLEF-SFKDNS---NLYMVMEYVAGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYLHSLDL 162 (350)
T ss_dssp HHHHHHHHTTCCCTTBCCEEE-EEECSS---EEEEEEECCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHhCCCCCCCeEEE-EEEcCC---EEEEEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 346788999999999999999 555543 68999999 8999999996543 49999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.+|.+||+|||++......
T Consensus 163 vHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~------------------------------------------------ 194 (350)
T 1rdq_E 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------------------------------------------------ 194 (350)
T ss_dssp ECCCCSGGGEEECTTSCEEECCCTTCEECSSC------------------------------------------------
T ss_pred ccccCccceEEECCCCCEEEcccccceeccCC------------------------------------------------
Confidence 99999999999999999999998887322100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
....+||+.|+|||++.+..++.++|||||||++|
T Consensus 195 ---------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ 229 (350)
T 1rdq_E 195 ---------------------------------------------TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIY 229 (350)
T ss_dssp ---------------------------------------------BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHH
T ss_pred ---------------------------------------------cccccCCccccCHHHhcCCCCCCcCCEecccHhHh
Confidence 01147899999999999989999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCC-----hHHHHcCcccCCC
Q 004989 303 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEP 367 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpt-----a~eiL~hp~~~~~ 367 (720)
||++ ||...... ..+..+....++ ++..+ +...+||.+||+.||.+||+ +.||++||||...
T Consensus 230 ell~g~~Pf~~~~~~-~~~~~i~~~~~~--~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h~~f~~~ 300 (350)
T 1rdq_E 230 EMAAGYPPFFADQPI-QIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATT 300 (350)
T ss_dssp HHHHSSCSSCCSSHH-HHHHHHHHCCCC--CCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGGTTC
T ss_pred HHhhCCCCCCCCCHH-HHHHHHHcCCCC--CCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhCcCcCCC
Confidence 9999 67665443 444444443221 22233 44559999999999999998 9999999999875
No 42
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=3.6e-35 Score=317.99 Aligned_cols=229 Identities=16% Similarity=0.151 Sum_probs=174.0
Q ss_pred CCCcccccccccCCCCccchhhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHH
Q 004989 42 PRLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVY 121 (720)
Q Consensus 42 ~~~~~~~r~~~~~~~~~~~~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~ 121 (720)
.+.++++++............+..+|..+|.+++|||||++++ ++.... ..|+||||..++|.+++......+++.
T Consensus 79 ~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~-~~~~~~---~~~lv~e~~~g~l~~~l~~~~~~l~~~ 154 (348)
T 1u5q_A 79 SEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG-CYLREH---TAWLVMEYCLGSASDLLEVHKKPLQEV 154 (348)
T ss_dssp TEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEE-EEEETT---EEEEEEECCSEEHHHHHHHHTSCCCHH
T ss_pred CeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEE-EEEECC---eEEEEEecCCCCHHHHHHHhcCCCCHH
Confidence 3344444443333222222234457888999999999999999 554443 679999996689999885545569999
Q ss_pred HHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhh
Q 004989 122 ECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQR 201 (720)
Q Consensus 122 ~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (720)
+++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 155 ~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~--------------------------- 207 (348)
T 1u5q_A 155 EIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA--------------------------- 207 (348)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB---------------------------
T ss_pred HHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEeeccCceecCCC---------------------------
Confidence 99999999999999999999999999999999999999999988887332100
Q ss_pred hhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcc
Q 004989 202 RTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPE 281 (720)
Q Consensus 202 r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE 281 (720)
....||+.|+|||
T Consensus 208 -------------------------------------------------------------------~~~~gt~~y~aPE 220 (348)
T 1u5q_A 208 -------------------------------------------------------------------NSFVGTPYWMAPE 220 (348)
T ss_dssp -------------------------------------------------------------------CCCCSCGGGCCHH
T ss_pred -------------------------------------------------------------------CcccCCcceeCHh
Confidence 0136899999999
Q ss_pred ccc---CCCCCccccchhhhchhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchH-HHHHHHcCCCCCCCCCC
Q 004989 282 ELA---GAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKE-ASFCLWLLHPEPSGRPK 354 (720)
Q Consensus 282 ~l~---~~~~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~-~~Li~~~L~~dP~~Rpt 354 (720)
++. +..++.++|||||||++|||++ ||.......... .+.....+......++.. .+||.+||+.||.+|||
T Consensus 221 ~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps 299 (348)
T 1u5q_A 221 VILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALY-HIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPT 299 (348)
T ss_dssp HHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH-HHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred hhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHH-HHHhcCCCCCCCCCCCHHHHHHHHHHcccChhhCcC
Confidence 985 4558999999999999999999 666655443333 333333333333444544 59999999999999999
Q ss_pred hHHHHcCcccCCCcc
Q 004989 355 MGELLQSEFLNEPRD 369 (720)
Q Consensus 355 a~eiL~hp~~~~~~~ 369 (720)
+.++|+||||.....
T Consensus 300 ~~~ll~h~~~~~~~~ 314 (348)
T 1u5q_A 300 SEVLLKHRFVLRERP 314 (348)
T ss_dssp HHHHTTCHHHHSCCC
T ss_pred HHHHhhChhhhccCC
Confidence 999999999987643
No 43
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=1.3e-34 Score=313.14 Aligned_cols=221 Identities=14% Similarity=0.215 Sum_probs=166.8
Q ss_pred hhchhhhhhcccCCCCCceecccceeecCCC-----CCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHH
Q 004989 62 LRKHSDGVELTHGDHLRNQGGLSGVCENEAA-----IDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYA 136 (720)
Q Consensus 62 ~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~-----~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~y 136 (720)
.+..+|..+|..++||||+++++ ++..... ...+|+||||.+++|.+.+......+++.+++.++.||+.||.|
T Consensus 61 ~~~~~E~~~l~~l~h~~iv~~~~-~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~ 139 (351)
T 3mi9_A 61 ITALREIKILQLLKHENVVNLIE-ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYY 139 (351)
T ss_dssp HHHHHHHHHHHHCCCTTBCCEEE-EEEEC--------CEEEEEEECCSEEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCcccHhh-eeeccccccccCCceEEEEEeccCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHH
Confidence 34457888999999999999999 5544321 34689999997779999997766679999999999999999999
Q ss_pred HHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCC
Q 004989 137 AHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 216 (720)
Q Consensus 137 LHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~ 216 (720)
||++||+||||||+|||++.++.+||+|||++.........
T Consensus 140 LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~--------------------------------------- 180 (351)
T 3mi9_A 140 IHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNS--------------------------------------- 180 (351)
T ss_dssp HHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCCCSSS---------------------------------------
T ss_pred HHHCCeeCCCCCHHHEEEcCCCCEEEccchhcccccccccc---------------------------------------
Confidence 99999999999999999999999999999988543221000
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC-CCCccccch
Q 004989 217 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIY 295 (720)
Q Consensus 217 ~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIw 295 (720)
.+.......||+.|+|||++.+. .++.++|||
T Consensus 181 -----------------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Diw 213 (351)
T 3mi9_A 181 -----------------------------------------------QPNRYTNRVVTLWYRPPELLLGERDYGPPIDLW 213 (351)
T ss_dssp -----------------------------------------------SCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHH
T ss_pred -----------------------------------------------cccccCCcccccCccCchhhcCCCCCCcHhHHH
Confidence 00000124789999999999874 489999999
Q ss_pred hhhchhhhccc---cCCCCchHHHH--HHHhhcCCCCcccccc-----------------------------CchHHHHH
Q 004989 296 RLGVLLFELFC---PFSTGEEKTRT--MSSLRHRVLPPQLLLK-----------------------------FPKEASFC 341 (720)
Q Consensus 296 SLGvll~eLlt---pf~~~~~~~~~--~~~l~~~~~p~~~~~~-----------------------------~p~~~~Li 341 (720)
||||++|||++ ||......... +..+. +.+++..... .+...+||
T Consensus 214 slG~il~ell~g~~pf~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 292 (351)
T 3mi9_A 214 GAGCIMAEMWTRSPIMQGNTEQHQLALISQLC-GSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLI 292 (351)
T ss_dssp HHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHH-CCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCCCChHHHHHHHHHHh-CCCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHH
Confidence 99999999999 66654433222 11222 2222221111 23456999
Q ss_pred HHcCCCCCCCCCChHHHHcCcccCCCccc
Q 004989 342 LWLLHPEPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 342 ~~~L~~dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
.+||++||.+|||+.|+|+||||.....+
T Consensus 293 ~~~L~~dP~~R~t~~e~l~hp~f~~~~~~ 321 (351)
T 3mi9_A 293 DKLLVLDPAQRIDSDDALNHDFFWSDPMP 321 (351)
T ss_dssp HHHSCSSGGGSCCHHHHHTSGGGGSSSCC
T ss_pred HHHhcCChhhCCCHHHHhCCCCcCCCCCc
Confidence 99999999999999999999999876443
No 44
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=2.3e-35 Score=328.90 Aligned_cols=209 Identities=15% Similarity=0.196 Sum_probs=166.7
Q ss_pred hhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCcee
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
+|..+|..++|||||++++ ++.+.. .+|+|||| .|++|.++|.+....+++..++.|+.||+.||.|||++||||
T Consensus 123 ~E~~il~~~~hp~Iv~l~~-~~~~~~---~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~giiH 198 (437)
T 4aw2_A 123 EERDVLVNGDSKWITTLHY-AFQDDN---NLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVH 198 (437)
T ss_dssp HHHHHHHHSCTTTBCCEEE-EEECSS---EEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhCCCCCEEEEEE-EEeeCC---EEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhCCeEe
Confidence 5666888899999999999 665554 57999999 899999999775566999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccc
Q 004989 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+||||+.++++||+|||+++.......
T Consensus 199 rDLKp~NILl~~~g~vkL~DFGla~~~~~~~~------------------------------------------------ 230 (437)
T 4aw2_A 199 RDIKPDNILMDMNGHIRLADFGSCLKLMEDGT------------------------------------------------ 230 (437)
T ss_dssp CCCSGGGEEECTTSCEEECCCTTCEECCTTSC------------------------------------------------
T ss_pred cccCHHHeeEcCCCCEEEcchhhhhhcccCCC------------------------------------------------
Confidence 99999999999999999999998743211100
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCccccc-----CCCCCccccchhhhc
Q 004989 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-----GAPVSCASDIYRLGV 299 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~-----~~~~s~~sDIwSLGv 299 (720)
......+||++|+|||++. ...|+.++|||||||
T Consensus 231 -----------------------------------------~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGv 269 (437)
T 4aw2_A 231 -----------------------------------------VQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGV 269 (437)
T ss_dssp -----------------------------------------EECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHH
T ss_pred -----------------------------------------cccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHH
Confidence 0001147999999999997 455899999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhh---cCCCCccccccCchHHHHHHHcCCCCCCC--CCChHHHHcCcccCCC
Q 004989 300 LLFELFC---PFSTGEEKTRTMSSLR---HRVLPPQLLLKFPKEASFCLWLLHPEPSG--RPKMGELLQSEFLNEP 367 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~---~~~~p~~~~~~~p~~~~Li~~~L~~dP~~--Rpta~eiL~hp~~~~~ 367 (720)
++|||++ ||............+. ...+|.......+...+||.+||..+|.+ ||+++|+++||||+..
T Consensus 270 il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~Hpff~~i 345 (437)
T 4aw2_A 270 CMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKHPFFSGI 345 (437)
T ss_dssp HHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTSGGGTTC
T ss_pred HHHHHHhCCCCCCCCChhHHHHhhhhccccccCCcccccCCHHHHHHHHHHhcccccccCCCCHHHHhCCCccCCC
Confidence 9999999 7766554432222222 22344443344556669999999998888 9999999999999986
No 45
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=9.3e-35 Score=324.85 Aligned_cols=208 Identities=18% Similarity=0.230 Sum_probs=166.3
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++|||||++++ ++.+.. .+|+|||| .|++|.+++.... .+++.++..++.||+.||.|||++|
T Consensus 56 ~~~~E~~il~~l~hpnIv~l~~-~~~~~~---~~~lv~E~~~gg~L~~~i~~~~-~~~e~~~~~i~~qil~aL~~lH~~g 130 (444)
T 3soa_A 56 KLEREARICRLLKHPNIVRLHD-SISEEG---HHYLIFDLVTGGELFEDIVARE-YYSEADASHCIQQILEAVLHCHQMG 130 (444)
T ss_dssp HHHHHHHHHHHCCBTTBCCEEE-EEECSS---EEEEEECCCBCCBHHHHHHHCS-CCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCcCCCeEEE-EEEECC---EEEEEEEeCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 4458888999999999999999 555543 67999999 8999999995544 4999999999999999999999999
Q ss_pred ceeccCCCCcEEEc---cCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCC
Q 004989 142 IVVHNVRPSCFVMS---SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 142 IvHrDLKP~NILl~---~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
|+||||||+|||++ .++.+||+|||++........
T Consensus 131 ivHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~~------------------------------------------ 168 (444)
T 3soa_A 131 VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQ------------------------------------------ 168 (444)
T ss_dssp CBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTCC------------------------------------------
T ss_pred ccccCCCHHHEEEeccCCCCcEEEccCceeEEecCCCc------------------------------------------
Confidence 99999999999998 457899999988743321100
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhh
Q 004989 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
......||+.|+|||++.+..|+.++||||||
T Consensus 169 ------------------------------------------------~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlG 200 (444)
T 3soa_A 169 ------------------------------------------------AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACG 200 (444)
T ss_dssp ------------------------------------------------BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHH
T ss_pred ------------------------------------------------eeecccCCcccCCHHHhcCCCCCCccccHHHH
Confidence 00114789999999999998899999999999
Q ss_pred chhhhccc---cCCCCchHHHHHHHhhcCC--CCcccc-ccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCC
Q 004989 299 VLLFELFC---PFSTGEEKTRTMSSLRHRV--LPPQLL-LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 366 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~--~p~~~~-~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~ 366 (720)
|++|+|++ ||...... .....+..+. ++.... ...+...+||.+||++||.+|||+.|+|+||||+.
T Consensus 201 vilyell~G~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~hp~~~~ 273 (444)
T 3soa_A 201 VILYILLVGYPPFWDEDQH-RLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWISH 273 (444)
T ss_dssp HHHHHHHHSSCSCCCSSHH-HHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSCTTHH
T ss_pred HHHHHHHhCCCCCCCccHH-HHHHHHHhCCCCCCccccccCCHHHHHHHHHHcCCChhHCCCHHHHhcCccccC
Confidence 99999999 66554443 4444444433 222222 33445569999999999999999999999999975
No 46
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=3.9e-35 Score=321.74 Aligned_cols=207 Identities=16% Similarity=0.212 Sum_probs=163.5
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|..++|||||++++ ++.+.. .+|+|||| .|++|.+++.... .+++..++.|+.||+.||.|||++|
T Consensus 61 ~~~~E~~il~~l~hp~Iv~l~~-~~~~~~---~~~lv~e~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH~~g 135 (384)
T 4fr4_A 61 NVFKELQIMQGLEHPFLVNLWY-SFQDEE---DMFMVVDLLLGGDLRYHLQQNV-HFKEETVKLFICELVMALDYLQNQR 135 (384)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEE-EEECSS---EEEEEECCCTTEEHHHHHHTTC-CCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCCCcEEE-EEEeCC---EEEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3447888999999999999999 565543 57999999 8999999996543 4999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.+|++||+|||++.......
T Consensus 136 ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~---------------------------------------------- 169 (384)
T 4fr4_A 136 IIHRDMKPDNILLDEHGHVHITDFNIAAMLPRET---------------------------------------------- 169 (384)
T ss_dssp EECCCCSGGGEEECTTSCEEECCCTTCEECCTTC----------------------------------------------
T ss_pred ceeccCcHHHeEECCCCCEEEeccceeeeccCCC----------------------------------------------
Confidence 9999999999999999999999998874321110
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC---CCCCccccchhhh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG---APVSCASDIYRLG 298 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~---~~~s~~sDIwSLG 298 (720)
.....+||+.|+|||++.+ ..|+.++||||||
T Consensus 170 ---------------------------------------------~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG 204 (384)
T 4fr4_A 170 ---------------------------------------------QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLG 204 (384)
T ss_dssp ---------------------------------------------CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHH
T ss_pred ---------------------------------------------ceeccCCCccccCCeeeccCCCCCCCccceeechH
Confidence 0011478999999999974 3489999999999
Q ss_pred chhhhccc---cCCCC--chHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCC-hHHHHcCcccCCC
Q 004989 299 VLLFELFC---PFSTG--EEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPK-MGELLQSEFLNEP 367 (720)
Q Consensus 299 vll~eLlt---pf~~~--~~~~~~~~~l~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpt-a~eiL~hp~~~~~ 367 (720)
|++|||++ ||... .........+..... .++..+ +...+||.+||++||.+||+ +.++++||||...
T Consensus 205 ~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~--~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~hp~f~~~ 278 (384)
T 4fr4_A 205 VTAYELLRGRRPYHIRSSTSSKEIVHTFETTVV--TYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQNFPYMNDI 278 (384)
T ss_dssp HHHHHHHHSSCSSCCCTTSCHHHHHHHHHHCCC--CCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHTSGGGTTC
T ss_pred HHHHHHHhCCCCCCCCCCccHHHHHHHHhhccc--CCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHcChhhhcC
Confidence 99999999 67532 222233333333221 122233 44559999999999999998 8999999999986
No 47
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=7.6e-36 Score=321.80 Aligned_cols=206 Identities=17% Similarity=0.209 Sum_probs=161.5
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
+..+|..+|..++||||+++++ ++.... .+|+||||.+++|.+++...+ .+++.+++.++.||+.||.|||++||
T Consensus 55 ~~~~E~~~l~~l~hpnIv~l~~-~~~~~~---~~~lv~E~~~g~l~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH~~gi 129 (336)
T 3h4j_B 55 RVEREISYLKLLRHPHIIKLYD-VITTPT---DIVMVIEYAGGELFDYIVEKK-RMTEDEGRRFFQQIICAIEYCHRHKI 129 (336)
T ss_dssp HHHHHHHHHTTCCCTTBCCEEE-EEECSS---EEEEEECCCCEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHhCCCCCCCeEEE-EEEeCC---EEEEEEECCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 4557888999999999999999 555543 579999998899999995443 49999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.+||+|||++...... .+
T Consensus 130 vH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~----------------------------------~~------------ 163 (336)
T 3h4j_B 130 VHRDLKPENLLLDDNLNVKIADFGLSNIMTDG----------------------------------NF------------ 163 (336)
T ss_dssp CCCCCSTTTEEECTTCCEEECCSSCTBTTTTS----------------------------------BT------------
T ss_pred EecCCchhhEEEcCCCCEEEEEeccceeccCC----------------------------------cc------------
Confidence 99999999999999999999999887432110 00
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCC-Cccccchhhhchh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYRLGVLL 301 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~-s~~sDIwSLGvll 301 (720)
....+||+.|+|||++.+..+ ++++|||||||++
T Consensus 164 ---------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il 198 (336)
T 3h4j_B 164 ---------------------------------------------LKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVL 198 (336)
T ss_dssp ---------------------------------------------TCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHH
T ss_pred ---------------------------------------------cccccCCcCcCCHHHHcCCCCCCCccchhHHHHHH
Confidence 011468999999999988875 7899999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCcccccc-CchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLK-FPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~-~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|+|++ ||...... .....+.... ..++.. .+...+||.+||.+||.+|||+.|+++||||+..
T Consensus 199 ~~ll~g~~Pf~~~~~~-~~~~~i~~~~--~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~~ 265 (336)
T 3h4j_B 199 YVMLVGRLPFDDEFIP-NLFKKVNSCV--YVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRDPWFNVN 265 (336)
T ss_dssp HHHHHSSCSSBCSSST-TCBCCCCSSC--CCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTCHHHHTT
T ss_pred HHHHhCCCCCCCccHH-HHHHHHHcCC--CCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhChhhccC
Confidence 99999 66543221 1111111111 112222 3445599999999999999999999999999865
No 48
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=1.4e-35 Score=320.90 Aligned_cols=205 Identities=18% Similarity=0.252 Sum_probs=163.3
Q ss_pred hhhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 65 HSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
.+|..+|..+ +||||+++++ ++.+.. .+|+|||| .|++|.+++.+.+ .+++.+++.++.||+.||.|||++||
T Consensus 65 ~~E~~il~~~~~hp~iv~l~~-~~~~~~---~~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~i 139 (345)
T 1xjd_A 65 MVEKRVLSLAWEHPFLTHMFC-TFQTKE---NLFFVMEYLNGGDLMYHIQSCH-KFDLSRATFYAAEIILGLQFLHSKGI 139 (345)
T ss_dssp HHHHHHHHHHTTCTTBCCEEE-EEECSS---EEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhcCCCCCCCcEEE-EEEeCC---EEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 3555667664 8999999999 565543 58999999 8999999995543 49999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.+|++||+|||+++...... .
T Consensus 140 vHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~----------------------------------~------------ 173 (345)
T 1xjd_A 140 VYRDLKLDNILLDKDGHIKIADFGMCKENMLGD----------------------------------A------------ 173 (345)
T ss_dssp BCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT----------------------------------C------------
T ss_pred EeCCCChhhEEECCCCCEEEeEChhhhhcccCC----------------------------------C------------
Confidence 999999999999999999999998874321100 0
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
.....+||+.|+|||++.+..++.++|||||||++|
T Consensus 174 --------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ 209 (345)
T 1xjd_A 174 --------------------------------------------KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLY 209 (345)
T ss_dssp --------------------------------------------CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHH
T ss_pred --------------------------------------------cccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHH
Confidence 001147899999999999999999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChH-HHHcCcccCCC
Q 004989 303 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMG-ELLQSEFLNEP 367 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~-eiL~hp~~~~~ 367 (720)
||++ ||...... ..+..+..... .++... +...+||.+||..||.+||++. +|++||||+..
T Consensus 210 ell~g~~Pf~~~~~~-~~~~~i~~~~~--~~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~~hp~f~~~ 276 (345)
T 1xjd_A 210 EMLIGQSPFHGQDEE-ELFHSIRMDNP--FYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREI 276 (345)
T ss_dssp HHHHSSCSSCCSSHH-HHHHHHHHCCC--CCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGSGGGTTC
T ss_pred HHhcCCCCCCCCCHH-HHHHHHHhCCC--CCCcccCHHHHHHHHHHhcCCHhHcCCChHHHHcCccccCC
Confidence 9999 67665443 34444443321 122223 4455999999999999999998 99999999986
No 49
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=7.9e-35 Score=303.59 Aligned_cols=207 Identities=18% Similarity=0.263 Sum_probs=157.7
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
+..+|..++..++||||+++++ ++.+.. .+++||||.+++|.+++.... .+++.+++.++.||+.||.|||++||
T Consensus 59 ~~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~i~~~l~~LH~~~i 133 (275)
T 2eue_A 59 RIEREISYLRLLRHPHIIKLYD-VIKSKD---EIIMVIEYAGNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCHRHKI 133 (275)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EEECSS---CEEEEEECCCEEHHHHHHTSS-SCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhCCCCCeEEEEE-EEecCC---eEEEEehhcCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCC
Confidence 4557888999999999999999 555443 579999998889999996544 49999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.+||+|||.+.......
T Consensus 134 ~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~----------------------------------------------- 166 (275)
T 2eue_A 134 VHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN----------------------------------------------- 166 (275)
T ss_dssp CCCCCSGGGEEECTTSCEEECCSSCC------------------------------------------------------
T ss_pred eeccCChHhEEECCCCCEEEeecccceeccCcc-----------------------------------------------
Confidence 999999999999999999999998873321110
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCC-Cccccchhhhchh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYRLGVLL 301 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~-s~~sDIwSLGvll 301 (720)
......||+.|+|||++.+..+ +.++|||||||++
T Consensus 167 --------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il 202 (275)
T 2eue_A 167 --------------------------------------------FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVIL 202 (275)
T ss_dssp ----------------------------------------------------CTTCCHHHHCC-----THHHHHHHHHHH
T ss_pred --------------------------------------------cccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHH
Confidence 0001368999999999988775 7899999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|||++ ||...... .....+.....+ ......+...+||.+||++||.+|||+.|+|+||||+..
T Consensus 203 ~~l~~g~~pf~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h~~f~~~ 269 (275)
T 2eue_A 203 YVMLCRRLPFDDESIP-VLFKNISNGVYT-LPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKVD 269 (275)
T ss_dssp HHHHHSSCSSCCSSHH-HHHHHHHHTCCC-CCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTCHHHHTT
T ss_pred HHHHhCCCCCCCCCHH-HHHHHHHhCCCC-CCccCCHHHHHHHHHHhhcCHhHCCCHHHHhhCCeeccc
Confidence 99999 77665443 333334333221 111233455699999999999999999999999999875
No 50
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=9.9e-35 Score=310.02 Aligned_cols=213 Identities=15% Similarity=0.178 Sum_probs=162.8
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCC-----CCCCCHHHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP-----KRSVDVYECLHIFRQIVEIVYAA 137 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~-----~~~l~~~~~~~i~~QIl~aL~yL 137 (720)
+..+|..+|.+++|||||++++ ++..+. .+|+||||.+++|.+++... ...+++..++.++.||+.||.||
T Consensus 49 ~~~~E~~~l~~l~hp~iv~~~~-~~~~~~---~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~l 124 (317)
T 2pmi_A 49 TAIREISLMKELKHENIVRLYD-VIHTEN---KLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFC 124 (317)
T ss_dssp HHHHHHHHHTTCCBTTBCCEEE-EECCTT---EEEEEEECCCCBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCcceEEE-EEEECC---eEEEEEEecCCCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHH
Confidence 3446888999999999999999 555443 68999999667999999432 23589999999999999999999
Q ss_pred HHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCC
Q 004989 138 HSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 138 Hs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~ 217 (720)
|++||+||||||+|||++.++.+||+|||++...+....
T Consensus 125 H~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~----------------------------------------- 163 (317)
T 2pmi_A 125 HENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVN----------------------------------------- 163 (317)
T ss_dssp HHTTEECCCCCGGGEEECTTCCEEECCCSSCEETTSCCC-----------------------------------------
T ss_pred HHCCeeeCCCChHHeEEcCCCCEEECcCccceecCCCcc-----------------------------------------
Confidence 999999999999999999999999999998844321100
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC-CCCccccchh
Q 004989 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYR 296 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwS 296 (720)
......||+.|+|||++.+. .++.++||||
T Consensus 164 -------------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~Diws 194 (317)
T 2pmi_A 164 -------------------------------------------------TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWS 194 (317)
T ss_dssp -------------------------------------------------CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHH
T ss_pred -------------------------------------------------cCCCCcccccccCchHhhCCCCCCcHHHHHH
Confidence 00113689999999999875 4899999999
Q ss_pred hhchhhhccc---cCCCCchHHHHHHHhhc-CCCCc------------------------------ccc-ccCchHHHHH
Q 004989 297 LGVLLFELFC---PFSTGEEKTRTMSSLRH-RVLPP------------------------------QLL-LKFPKEASFC 341 (720)
Q Consensus 297 LGvll~eLlt---pf~~~~~~~~~~~~l~~-~~~p~------------------------------~~~-~~~p~~~~Li 341 (720)
|||++|||++ ||............... +..++ ... ...+...+||
T Consensus 195 lG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 274 (317)
T 2pmi_A 195 CGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFL 274 (317)
T ss_dssp HHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHH
Confidence 9999999999 67665443222211110 00000 000 1223445999
Q ss_pred HHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004989 342 LWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 342 ~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
.+||++||.+|||+.|+|+||||++...
T Consensus 275 ~~~L~~dP~~Rpt~~e~l~hp~f~~~~~ 302 (317)
T 2pmi_A 275 HGLLQLNPDMRLSAKQALHHPWFAEYYH 302 (317)
T ss_dssp HHHSCSSGGGSCCHHHHTTSGGGGGGCC
T ss_pred HHHCCCCcccCCCHHHHhCChhhhcccc
Confidence 9999999999999999999999998744
No 51
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-34 Score=318.67 Aligned_cols=211 Identities=18% Similarity=0.282 Sum_probs=168.1
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++|||||++++ ++.+.. .+|+|||| .|++|.+++......+++.+++.++.||+.||.|||++|
T Consensus 94 ~~~~E~~il~~l~hpnIv~~~~-~~~~~~---~~~lv~E~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~g 169 (387)
T 1kob_A 94 TVKNEISIMNQLHHPKLINLHD-AFEDKY---EMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHS 169 (387)
T ss_dssp HHHHHHHHHTTCCSTTBCCEEE-EEECSS---EEEEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCcCCCeEEE-EEEeCC---EEEEEEEcCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 4457888999999999999999 555543 68999999 899999999766656999999999999999999999999
Q ss_pred ceeccCCCCcEEEcc--CCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCC
Q 004989 142 IVVHNVRPSCFVMSS--FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 142 IvHrDLKP~NILl~~--~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
|+||||||+|||++. .+.+||+|||++.......
T Consensus 170 ivHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~-------------------------------------------- 205 (387)
T 1kob_A 170 IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE-------------------------------------------- 205 (387)
T ss_dssp EECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTS--------------------------------------------
T ss_pred eeecccchHHeEEecCCCCceEEEecccceecCCCc--------------------------------------------
Confidence 999999999999974 4679999988874321110
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhc
Q 004989 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
......||+.|+|||++.+..++.++|||||||
T Consensus 206 -----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~ 238 (387)
T 1kob_A 206 -----------------------------------------------IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGV 238 (387)
T ss_dssp -----------------------------------------------CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHH
T ss_pred -----------------------------------------------ceeeeccCCCccCchhccCCCCCCcccEeeHhH
Confidence 001136899999999999988999999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcC--CCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004989 300 LLFELFC---PFSTGEEKTRTMSSLRHR--VLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~~--~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
++|||++ ||...... .....+... .+++.....+ +...+||.+||+.||.+|||+.|+|+||||+....
T Consensus 239 il~elltg~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 313 (387)
T 1kob_A 239 LGYVLLSGLSPFAGEDDL-ETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDHS 313 (387)
T ss_dssp HHHHHHHSCCSSCCSSHH-HHHHHHHHCCCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTSTTTSSCCT
T ss_pred HHHHHHhCCCCCCCCCHH-HHHHHHHhCCCCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCccccCCcc
Confidence 9999999 67665443 333333332 2233333333 45569999999999999999999999999987633
No 52
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=5.8e-35 Score=315.29 Aligned_cols=214 Identities=18% Similarity=0.268 Sum_probs=163.0
Q ss_pred hchhhhhhcccCCC--CCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 63 RKHSDGVELTHGDH--LRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~L~~l~H--pnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+..+|..+|.++.| |||+++++ ++..+. .+|+|||+.+++|.+++.... .+++.+++.|+.||+.||.|||++
T Consensus 53 ~~~~E~~~l~~l~~~~~~iv~~~~-~~~~~~---~~~lv~e~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~al~~lH~~ 127 (343)
T 3dbq_A 53 SYRNEIAYLNKLQQHSDKIIRLYD-YEITDQ---YIYMVMECGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQH 127 (343)
T ss_dssp HHHHHHHHHHHHTTTCTTBCCEEE-EEECSS---EEEEEECCCSEEHHHHHHHSC-CCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhhhhcCCceEEEee-eEeeCC---EEEEEEeCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC
Confidence 34478888988877 99999999 555443 689999998899999996543 499999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+|||++ ++.+||+|||++.........
T Consensus 128 ~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~~------------------------------------------- 163 (343)
T 3dbq_A 128 GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS------------------------------------------- 163 (343)
T ss_dssp TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC-------------------------------------------------
T ss_pred CeecCCCCcceEEEE-CCcEEEeecccccccCccccc-------------------------------------------
Confidence 999999999999996 688999999988443211000
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC-----------CCCC
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-----------APVS 289 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-----------~~~s 289 (720)
......+||+.|+|||++.+ ..++
T Consensus 164 ---------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~ 198 (343)
T 3dbq_A 164 ---------------------------------------------VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKIS 198 (343)
T ss_dssp ---------------------------------------------------CCCCSSCCHHHHHHCC-----------CC
T ss_pred ---------------------------------------------ccCCCCcCCcCcCCHHHHhhccccccccccccCCC
Confidence 00011478999999999864 5589
Q ss_pred ccccchhhhchhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccC
Q 004989 290 CASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLN 365 (720)
Q Consensus 290 ~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~ 365 (720)
.++|||||||++|||++ ||.........+..+........++...+ ...+|+.+||++||.+|||+.|+|+||||+
T Consensus 199 ~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~~~ 278 (343)
T 3dbq_A 199 PKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 278 (343)
T ss_dssp HHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHH
T ss_pred chhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHhcCCcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCcccc
Confidence 99999999999999999 67654444333444433333333333444 455999999999999999999999999998
Q ss_pred CCccc
Q 004989 366 EPRDS 370 (720)
Q Consensus 366 ~~~~~ 370 (720)
....+
T Consensus 279 ~~~~~ 283 (343)
T 3dbq_A 279 IQTHP 283 (343)
T ss_dssp SCCC-
T ss_pred ccCCc
Confidence 76443
No 53
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=2.7e-34 Score=324.69 Aligned_cols=208 Identities=19% Similarity=0.215 Sum_probs=165.8
Q ss_pred hhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 62 LRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 62 ~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
.+..+|..+|.+++|||||++++ ++.+.. .+|+|||| .|++|.+++.... .+++.+++.++.||+.||.|||++
T Consensus 71 ~~~~~E~~~l~~l~hpniv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~ 145 (484)
T 3nyv_A 71 ESLLREVQLLKQLDHPNIMKLYE-FFEDKG---YFYLVGEVYTGGELFDEIISRK-RFSEVDAARIIRQVLSGITYMHKN 145 (484)
T ss_dssp HHHHHHHHHHTTCCCTTBCCEEE-EEECSS---EEEEEECCCCSCBHHHHHHTCS-CCBHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhCCCCCCCcEEE-EEEeCC---EEEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC
Confidence 34457888999999999999999 565543 68999999 8999999996544 499999999999999999999999
Q ss_pred CceeccCCCCcEEE---ccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCC
Q 004989 141 GIVVHNVRPSCFVM---SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 141 gIvHrDLKP~NILl---~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~ 217 (720)
||+||||||+|||+ +.++.+||+|||++.......
T Consensus 146 ~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~------------------------------------------ 183 (484)
T 3nyv_A 146 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK------------------------------------------ 183 (484)
T ss_dssp TCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCCC------------------------------------------
T ss_pred CeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccccc------------------------------------------
Confidence 99999999999999 467889999888873321110
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhh
Q 004989 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRL 297 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSL 297 (720)
.....+||+.|+|||++.+ .|+.++|||||
T Consensus 184 -------------------------------------------------~~~~~~gt~~y~aPE~~~~-~~~~~~Diwsl 213 (484)
T 3nyv_A 184 -------------------------------------------------KMKDKIGTAYYIAPEVLHG-TYDEKCDVWST 213 (484)
T ss_dssp -------------------------------------------------SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHH
T ss_pred -------------------------------------------------ccccCCCCccccCceeecC-CCCCcceeHHH
Confidence 0011468999999999987 59999999999
Q ss_pred hchhhhccc---cCCCCchHHHHHHHhhcCCCC---ccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 298 GVLLFELFC---PFSTGEEKTRTMSSLRHRVLP---PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 298 Gvll~eLlt---pf~~~~~~~~~~~~l~~~~~p---~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
||++|+|++ ||...... .....+..+.++ +.+....+...+||.+||++||.+|||+.|+|+||||+..
T Consensus 214 G~il~~ll~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h~~~~~~ 288 (484)
T 3nyv_A 214 GVILYILLSGCPPFNGANEY-DILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTY 288 (484)
T ss_dssp HHHHHHHHHSSCSSCCSSHH-HHHHHHHHCCCCCCSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHHH
T ss_pred HHHHHHHHHCCCCCCCCCHH-HHHHHHHcCCCCCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhhChhhccc
Confidence 999999999 67665544 344444444332 2222334455699999999999999999999999999864
No 54
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=2.4e-34 Score=311.56 Aligned_cols=209 Identities=15% Similarity=0.161 Sum_probs=159.6
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..+|.+++||||+++++ ++.... .+++|||| .|++|.+++... ..+++.+++.++.||+.||.|||++||+
T Consensus 96 ~~E~~~l~~l~h~niv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~L~~LH~~~iv 170 (349)
T 2w4o_A 96 RTEIGVLLRLSHPNIIKLKE-IFETPT---EISLVLELVTGGELFDRIVEK-GYYSERDAADAVKQILEAVAYLHENGIV 170 (349)
T ss_dssp ---CHHHHHCCCTTBCCEEE-EEECSS---EEEEEECCCCSCBHHHHHTTC-SSCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHhCCCCCCcceee-eEecCC---eEEEEEEeCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeE
Confidence 36777999999999999999 555443 57999999 899999999554 3499999999999999999999999999
Q ss_pred eccCCCCcEEEcc---CCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 144 VHNVRPSCFVMSS---FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 144 HrDLKP~NILl~~---~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||||||+|||++. ++.+||+|||++.......
T Consensus 171 H~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~--------------------------------------------- 205 (349)
T 2w4o_A 171 HRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQV--------------------------------------------- 205 (349)
T ss_dssp CCCCCGGGEEESSSSTTCCEEECCCC------------------------------------------------------
T ss_pred ecCCCcccEEEecCCCCCCEEEccCccccccCccc---------------------------------------------
Confidence 9999999999975 8899999988874321100
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhch
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
......||+.|+|||++.+..++.++|||||||+
T Consensus 206 ----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~i 239 (349)
T 2w4o_A 206 ----------------------------------------------LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGII 239 (349)
T ss_dssp -----------------------------------------------------CGGGSCHHHHTTCCCCTHHHHHHHHHH
T ss_pred ----------------------------------------------ccccccCCCCccCHHHhcCCCCCcccchHHHHHH
Confidence 0011468999999999999889999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCC--CccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004989 301 LFELFC---PFSTGEEKTRTMSSLRHRVL--PPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~--p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
+|||++ ||............+..... ++...... +...+||.+||.+||.+|||+.|+|+||||.....
T Consensus 240 l~ell~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~~ 314 (349)
T 2w4o_A 240 TYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPWVTGKAA 314 (349)
T ss_dssp HHHHHHSSCTTCCTTCHHHHHHHHHTTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTTSTTC
T ss_pred HHHHHhCCCCCCCCcccHHHHHHHHhCCCccCCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhcCcccCCCcc
Confidence 999999 67655544444444444322 22222333 44559999999999999999999999999997643
No 55
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=1e-34 Score=318.77 Aligned_cols=238 Identities=16% Similarity=0.117 Sum_probs=169.2
Q ss_pred CCCcccccccccCCCCccchhhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC-CCCCC
Q 004989 42 PRLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVD 119 (720)
Q Consensus 42 ~~~~~~~r~~~~~~~~~~~~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~-~~~l~ 119 (720)
.+.++++++..... .....-+..+|..+|.+++|||||++++ ++.+.. .+|+|||| .+++|.+++... ...++
T Consensus 52 ~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~ 126 (389)
T 3gni_B 52 GEYVTVRRINLEAC-SNEMVTFLQGELHVSKLFNHPNIVPYRA-TFIADN---ELWVVTSFMAYGSAKDLICTHFMDGMN 126 (389)
T ss_dssp CCEEEEEEEEGGGS-CHHHHHHHHHHHHHHHHCCCTTBCCEEE-EEEETT---EEEEEEECCTTCBHHHHHHHTCTTCCC
T ss_pred CCEEEEEEeccccc-ChHHHHHHHHHHHHHHhCCCCCCCcEeE-EEEECC---EEEEEEEccCCCCHHHHHhhhcccCCC
Confidence 34445454443222 2222234447888999999999999999 555443 68999999 899999999443 34599
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhh
Q 004989 120 VYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDML 199 (720)
Q Consensus 120 ~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (720)
+..++.|+.||+.||.|||++||+||||||+|||++.++.+||+|||.+....
T Consensus 127 ~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~--------------------------- 179 (389)
T 3gni_B 127 ELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMI--------------------------- 179 (389)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCGGGCEECE---------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccccceeec---------------------------
Confidence 99999999999999999999999999999999999999999999998873221
Q ss_pred hhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccC
Q 004989 200 QRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYAS 279 (720)
Q Consensus 200 ~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~A 279 (720)
+.|..... ........+||+.|+|
T Consensus 180 ---------~~~~~~~~-----------------------------------------------~~~~~~~~~gt~~y~a 203 (389)
T 3gni_B 180 ---------SHGQRQRV-----------------------------------------------VHDFPKYSVKVLPWLS 203 (389)
T ss_dssp ---------ETTEECSC-----------------------------------------------BCCCCTTCTTTGGGSC
T ss_pred ---------cccccccc-----------------------------------------------cccccccccccccccC
Confidence 11000000 0000011478999999
Q ss_pred cccccC--CCCCccccchhhhchhhhccc---cCCCCchHHHHHHHhhcCCCC---------------------------
Q 004989 280 PEELAG--APVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLP--------------------------- 327 (720)
Q Consensus 280 PE~l~~--~~~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p--------------------------- 327 (720)
||++.+ ..++.++|||||||++|||++ ||............+... .+
T Consensus 204 PE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (389)
T 3gni_B 204 PEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGT-VPCLLDTSTIPAEELTMSPSRSVANSGLS 282 (389)
T ss_dssp HHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC----------------------------------
T ss_pred HHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCC-CCccccccccccccccccccccccccccc
Confidence 999988 469999999999999999999 676543332222222110 00
Q ss_pred -----------------ccccc-cCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004989 328 -----------------PQLLL-KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 328 -----------------~~~~~-~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
..+.. ..+...+||.+||++||.+|||+.|+|+||||+...
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f~~~~ 341 (389)
T 3gni_B 283 DSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIK 341 (389)
T ss_dssp -----------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGGGC-
T ss_pred cccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHHHHHh
Confidence 00111 223445999999999999999999999999998764
No 56
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=4e-35 Score=314.19 Aligned_cols=210 Identities=13% Similarity=0.153 Sum_probs=164.9
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..++..++||||+++++ ++.++. ..|+|||| .|++|.+++... ..+++.+++.++.||+.||.|||++||+
T Consensus 53 ~~E~~~l~~l~hpnIv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~LH~~giv 127 (323)
T 3tki_A 53 KKEICINKMLNHENVVKFYG-HRREGN---IQYLFLEYCSGGELFDRIEPD-IGMPEPDAQRFFHQLMAGVVYLHGIGIT 127 (323)
T ss_dssp HHHHHHHHHCCCTTBCCEEE-EEECSS---EEEEEEECCTTEEGGGGSBTT-TBCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHhCCCCCCCeEEE-EEecCC---eEEEEEEcCCCCcHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 46777899999999999999 555543 67999999 789999999544 4499999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.+||+|||++.........
T Consensus 128 H~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~---------------------------------------------- 161 (323)
T 3tki_A 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRE---------------------------------------------- 161 (323)
T ss_dssp CSCCSGGGEEECTTCCEEECCCTTCEECEETTEE----------------------------------------------
T ss_pred ccccchHHEEEeCCCCEEEEEeeccceeccCCcc----------------------------------------------
Confidence 9999999999999999999999987432111000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCC-Cccccchhhhchhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYRLGVLLF 302 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~-s~~sDIwSLGvll~ 302 (720)
.......||+.|+|||++.+..+ +.++|||||||++|
T Consensus 162 ------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ 199 (323)
T 3tki_A 162 ------------------------------------------RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLT 199 (323)
T ss_dssp ------------------------------------------CCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHH
T ss_pred ------------------------------------------cccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHH
Confidence 00011478999999999988775 78999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcC-CCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 303 ELFC---PFSTGEEKTRTMSSLRHR-VLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~-~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
+|++ ||................ ...+......+...+||.+||++||.+|||+.|+++||||+..
T Consensus 200 ~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~~ 268 (323)
T 3tki_A 200 AMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKP 268 (323)
T ss_dssp HHHHSSCSCSSSCTTSHHHHHHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCC
T ss_pred HHHhCCCCCCCCchHHHHHHHHhcccccCCccccCCHHHHHHHHHHccCChhhCcCHHHHhhChhhccc
Confidence 9999 676544432333333322 2223333344555699999999999999999999999999875
No 57
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=8.9e-35 Score=320.07 Aligned_cols=206 Identities=18% Similarity=0.276 Sum_probs=161.2
Q ss_pred hhhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 65 HSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
.+|..+|.++ +|||||++++ ++.+.. .+|+|||| .|++|.+++.+.+ .+++..++.|+.||+.||.|||++||
T Consensus 100 ~~E~~il~~~~~hp~Iv~l~~-~~~~~~---~~~lV~E~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH~~gi 174 (396)
T 4dc2_A 100 QTEKHVFEQASNHPFLVGLHS-CFQTES---RLFFVIEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALNYLHERGI 174 (396)
T ss_dssp HHHHHHHHHHTTCTTBCCEEE-EEECSS---EEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhcCCCCCcCeeEE-EEEECC---EEEEEEEcCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence 3566677665 8999999999 665543 68999999 8999999995543 49999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.+|++||+|||+++...... +
T Consensus 175 vHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~---------------------------------~------------- 208 (396)
T 4dc2_A 175 IYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG---------------------------------D------------- 208 (396)
T ss_dssp BCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT---------------------------------C-------------
T ss_pred EeccCCHHHEEECCCCCEEEeecceeeecccCC---------------------------------C-------------
Confidence 999999999999999999999999884311100 0
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
.....+||+.|+|||++.+..|+.++|||||||++|
T Consensus 209 --------------------------------------------~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvlly 244 (396)
T 4dc2_A 209 --------------------------------------------TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMF 244 (396)
T ss_dssp --------------------------------------------CBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHH
T ss_pred --------------------------------------------ccccccCCcccCCchhhcCCCCChHHHHHHHHHHHH
Confidence 001257899999999999999999999999999999
Q ss_pred hccc---cCCCCc--------hHHHHHHHhhcCCCCccccc-cCchHHHHHHHcCCCCCCCCCCh------HHHHcCccc
Q 004989 303 ELFC---PFSTGE--------EKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPKM------GELLQSEFL 364 (720)
Q Consensus 303 eLlt---pf~~~~--------~~~~~~~~l~~~~~p~~~~~-~~p~~~~Li~~~L~~dP~~Rpta------~eiL~hp~~ 364 (720)
||++ ||.... ........+....+ .++. ..+...+||.+||++||.+||++ .||++||||
T Consensus 245 ell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~--~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hpff 322 (396)
T 4dc2_A 245 EMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI--RIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFF 322 (396)
T ss_dssp HHHHSSCSSTTTTC------CCHHHHHHHHHHCCC--CCCTTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHSTTT
T ss_pred HHHhCCCCCcccccccccchhhHHHHHHHHhcccc--CCCCcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcCccc
Confidence 9999 664221 11223333333221 1122 23455699999999999999985 799999999
Q ss_pred CCC
Q 004989 365 NEP 367 (720)
Q Consensus 365 ~~~ 367 (720)
+..
T Consensus 323 ~~i 325 (396)
T 4dc2_A 323 RNV 325 (396)
T ss_dssp TTC
T ss_pred cCC
Confidence 986
No 58
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=3.8e-35 Score=324.57 Aligned_cols=206 Identities=16% Similarity=0.195 Sum_probs=163.6
Q ss_pred hhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCcee
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
+|..+|..++|||||++++ ++.+.. .+|+|||| .|++|.+++.+. .+++..++.++.||+.||.|||++||||
T Consensus 118 ~E~~il~~l~hp~Iv~l~~-~~~~~~---~~~lV~E~~~gg~L~~~l~~~--~~~e~~~~~~~~qi~~aL~~LH~~givH 191 (410)
T 3v8s_A 118 EERDIMAFANSPWVVQLFY-AFQDDR---YLYMVMEYMPGGDLVNLMSNY--DVPEKWARFYTAEVVLALDAIHSMGFIH 191 (410)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EEECSS---EEEEEECCCTTEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhCCCCCCCeEEE-EEEECC---EEEEEEeCCCCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEe
Confidence 5667889999999999999 665543 68999999 799999999653 3899999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccc
Q 004989 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+|||++.+|++||+|||++.........
T Consensus 192 rDLKp~NILl~~~g~ikL~DFG~a~~~~~~~~~----------------------------------------------- 224 (410)
T 3v8s_A 192 RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMV----------------------------------------------- 224 (410)
T ss_dssp CCCSGGGEEECTTSCEEECCCTTCEECCTTSEE-----------------------------------------------
T ss_pred ccCCHHHeeECCCCCEEEeccceeEeeccCCcc-----------------------------------------------
Confidence 999999999999999999999988432211000
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC----CCccccchhhhch
Q 004989 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP----VSCASDIYRLGVL 300 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~----~s~~sDIwSLGvl 300 (720)
.....+||+.|+|||++.+.. |+.++|||||||+
T Consensus 225 ------------------------------------------~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvi 262 (410)
T 3v8s_A 225 ------------------------------------------RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVF 262 (410)
T ss_dssp ------------------------------------------ECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHH
T ss_pred ------------------------------------------cccCCcCCccccCHHHhhccCCCcCCCCcceEecchHH
Confidence 001247999999999998765 8899999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcC---CCCccccccCchHHHHHHHcCCCCCCC--CCChHHHHcCcccCCC
Q 004989 301 LFELFC---PFSTGEEKTRTMSSLRHR---VLPPQLLLKFPKEASFCLWLLHPEPSG--RPKMGELLQSEFLNEP 367 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~---~~p~~~~~~~p~~~~Li~~~L~~dP~~--Rpta~eiL~hp~~~~~ 367 (720)
+|||++ ||...... ..+..+... ...|......+...+||.+||..+|.+ ||+++||++||||+..
T Consensus 263 lyell~G~~Pf~~~~~~-~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~Hp~f~~~ 336 (410)
T 3v8s_A 263 LYEMLVGDTPFYADSLV-GTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKND 336 (410)
T ss_dssp HHHHHHSSCTTCCSSHH-HHHHHHHTHHHHCCCCTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTSGGGCCS
T ss_pred HHHHHhCCCCCCCCChh-hHHHHHHhccccccCCCcccccHHHHHHHHHHccChhhhCCCCCHHHHhcCccccCC
Confidence 999999 77665544 333333321 111222223345569999999999988 9999999999999986
No 59
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=1.2e-34 Score=315.46 Aligned_cols=208 Identities=15% Similarity=0.168 Sum_probs=155.0
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++..++|||||++++ ++.+.. .+|+|||| .|++|.+++...+ .+++.+++.++.||+.||.|||++||
T Consensus 63 ~~~E~~~l~~l~hpniv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~ql~~~L~~LH~~~i 137 (361)
T 3uc3_A 63 VQREIINHRSLRHPNIVRFKE-VILTPT---HLAIIMEYASGGELYERICNAG-RFSEDEARFFFQQLLSGVSYCHSMQI 137 (361)
T ss_dssp HHHHHHHHHHCCCTTBCCEEE-EEECSS---EEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhCCCCCCCcEEE-EEeeCC---EEEEEEEeCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 347788899999999999999 555443 58999999 7999999995543 49999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCc--eEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 143 VVHNVRPSCFVMSSFNH--VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~--vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
+||||||+|||++.++. +||+|||++.......
T Consensus 138 vH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~--------------------------------------------- 172 (361)
T 3uc3_A 138 CHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS--------------------------------------------- 172 (361)
T ss_dssp CSCCCCGGGEEECSSSSCCEEECCCCCC----------------------------------------------------
T ss_pred ccCCCCHHHEEEcCCCCceEEEeecCccccccccC---------------------------------------------
Confidence 99999999999987665 9999888773210000
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCcc-ccchhhhc
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCA-SDIYRLGV 299 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~-sDIwSLGv 299 (720)
.....+||++|+|||++.+..++.+ +|||||||
T Consensus 173 ----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~ 206 (361)
T 3uc3_A 173 ----------------------------------------------QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGV 206 (361)
T ss_dssp ------------------------------------------------------CTTSCHHHHHCSSCCHHHHHHHHHHH
T ss_pred ----------------------------------------------CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHH
Confidence 0011468999999999988887554 99999999
Q ss_pred hhhhccc---cCCCCch---HHHHHHHhhcCCC-CccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 300 LLFELFC---PFSTGEE---KTRTMSSLRHRVL-PPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 300 ll~eLlt---pf~~~~~---~~~~~~~l~~~~~-p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
++|+|++ ||..... ....+..+..... .+......+...+||.+||++||.+|||+.|+++||||...
T Consensus 207 il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~ 281 (361)
T 3uc3_A 207 TLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPECCHLISRIFVADPATRISIPEIKTHSWFLKN 281 (361)
T ss_dssp HHHHHHHSSCSCC----CCCHHHHHHHHHTTCCCCCTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTSHHHHTT
T ss_pred HHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCCCCCCcCCCCHHHHHHHHHHccCChhHCcCHHHHHhCcchhcC
Confidence 9999999 6654322 2233333332222 22222334556699999999999999999999999999765
No 60
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=1.5e-34 Score=313.40 Aligned_cols=208 Identities=19% Similarity=0.249 Sum_probs=163.6
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~---~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
..+|..++..++|||||++++ ++.+.. .+|+|||| .|++|.+++.+ .+..+++..++.++.||+.||.|||+
T Consensus 73 ~~~E~~~l~~l~hpnIv~~~~-~~~~~~---~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~ 148 (351)
T 3c0i_A 73 LKREASICHMLKHPHIVELLE-TYSSDG---MLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHD 148 (351)
T ss_dssp HHHHHHHHHHCCCTTBCCEEE-EEEETT---EEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCCcEEE-EEEeCC---EEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 447788999999999999999 555543 68999999 88999988832 33458999999999999999999999
Q ss_pred CCceeccCCCCcEEEccCCc---eEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCC
Q 004989 140 QGIVVHNVRPSCFVMSSFNH---VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 216 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~---vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~ 216 (720)
+||+||||||+|||++.++. +||+|||++...+....
T Consensus 149 ~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~~~~~~---------------------------------------- 188 (351)
T 3c0i_A 149 NNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGL---------------------------------------- 188 (351)
T ss_dssp TTEECSCCSGGGEEECSSSTTCCEEECCCTTCEECCTTSC----------------------------------------
T ss_pred CCceeccCChHHeEEecCCCCCcEEEecCcceeEecCCCe----------------------------------------
Confidence 99999999999999986654 99999888743321100
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchh
Q 004989 217 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYR 296 (720)
Q Consensus 217 ~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwS 296 (720)
.....+||+.|+|||++.+..++.++||||
T Consensus 189 --------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Diws 218 (351)
T 3c0i_A 189 --------------------------------------------------VAGGRVGTPHFMAPEVVKREPYGKPVDVWG 218 (351)
T ss_dssp --------------------------------------------------BCCCCCSCGGGCCHHHHTTCCBCTHHHHHH
T ss_pred --------------------------------------------------eecCCcCCcCccCHHHHcCCCCCchHhhHH
Confidence 001147899999999999988999999999
Q ss_pred hhchhhhccc---cCCCCchHHHHHHHhhcCC--CCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 297 LGVLLFELFC---PFSTGEEKTRTMSSLRHRV--LPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 297 LGvll~eLlt---pf~~~~~~~~~~~~l~~~~--~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|||++|+|++ ||..... .....+.... .++......+ ...+||.+||++||.+|||+.|+|+||||+..
T Consensus 219 lG~il~~ll~g~~pf~~~~~--~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~~ 293 (351)
T 3c0i_A 219 CGVILFILLSGCLPFYGTKE--RLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLKER 293 (351)
T ss_dssp HHHHHHHHHHSSCSSCSSHH--HHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTH
T ss_pred HHHHHHHHHHCCCCCCCcHH--HHHHHHHcCCCCCCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcChhhcCC
Confidence 9999999999 6665432 3334443332 2333333334 45599999999999999999999999999763
No 61
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=4.8e-35 Score=319.40 Aligned_cols=214 Identities=16% Similarity=0.209 Sum_probs=156.1
Q ss_pred hchhhhhhcccCCCCCceecccceeecC---CCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENE---AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~---~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
+..+|..+|.+++||||+++++ ++... .....+|++||+.+++|.+++.. ..+++..++.++.||+.||.|||+
T Consensus 74 ~~~~E~~~l~~l~hpnIv~~~~-~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~ 150 (367)
T 2fst_X 74 RTYRELRLLKHMKHENVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHS 150 (367)
T ss_dssp HHHHHHHHHHHCCCTTBCCCSE-EECSCSSGGGCCCCEEEEECCCEECC-------CCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCCcEEE-EEecCCccccCCeEEEEecccCCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH
Confidence 4558889999999999999999 54432 12245799999998999998854 349999999999999999999999
Q ss_pred CCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCC
Q 004989 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||+||||||+|||++.++.+||+|||+++..+..
T Consensus 151 ~givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~--------------------------------------------- 185 (367)
T 2fst_X 151 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE--------------------------------------------- 185 (367)
T ss_dssp TTCCCCCCCGGGEEECTTCCEEECC-------------------------------------------------------
T ss_pred CCeeeCCCCHhhEEECCCCCEEEeecccccccccc---------------------------------------------
Confidence 99999999999999999999999998887332100
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC-CCCCccccchhhh
Q 004989 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLG 298 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sDIwSLG 298 (720)
....+||++|+|||++.+ ..++.++||||||
T Consensus 186 ------------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG 217 (367)
T 2fst_X 186 ------------------------------------------------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVG 217 (367)
T ss_dssp -----------------------------------------------------CCCTTCCHHHHTTCCSCCTTHHHHHHH
T ss_pred ------------------------------------------------CCCcCcCcCccChHHHcCCcCCCchhhHHHHH
Confidence 011478999999999987 5689999999999
Q ss_pred chhhhccc---cCCCCchHHHHHHHhhc-CCC-----------------------Cc-----cccccCchHHHHHHHcCC
Q 004989 299 VLLFELFC---PFSTGEEKTRTMSSLRH-RVL-----------------------PP-----QLLLKFPKEASFCLWLLH 346 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~-~~~-----------------------p~-----~~~~~~p~~~~Li~~~L~ 346 (720)
|++|||++ ||.+..........+.. +.. +. .+....+...+||.+||.
T Consensus 218 ~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~ 297 (367)
T 2fst_X 218 CIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 297 (367)
T ss_dssp HHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSC
T ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCC
Confidence 99999999 67665443222211110 000 00 011223445699999999
Q ss_pred CCCCCCCChHHHHcCcccCCCccchH
Q 004989 347 PEPSGRPKMGELLQSEFLNEPRDSME 372 (720)
Q Consensus 347 ~dP~~Rpta~eiL~hp~~~~~~~~l~ 372 (720)
+||.+|||+.|+|+||||.....+..
T Consensus 298 ~dP~~R~t~~e~L~hp~~~~~~~~~~ 323 (367)
T 2fst_X 298 LDSDKRITAAQALAHAYFAQYHDPDD 323 (367)
T ss_dssp SSGGGSCCHHHHHTSGGGTTTCCGGG
T ss_pred CCcccCcCHHHHhcChhhhhccCCCC
Confidence 99999999999999999998765443
No 62
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=1.9e-34 Score=311.94 Aligned_cols=207 Identities=18% Similarity=0.271 Sum_probs=161.8
Q ss_pred chhhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 64 KHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 64 ~~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
..+|..+|.++ +|||||++++ ++.+.. .+|+|||| .|++|.+++.+.+ .+++..++.++.||+.||.|||++|
T Consensus 56 ~~~E~~~l~~~~~hp~iv~l~~-~~~~~~---~~~lv~e~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH~~~ 130 (345)
T 3a8x_A 56 VQTEKHVFEQASNHPFLVGLHS-CFQTES---RLFFVIEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALNYLHERG 130 (345)
T ss_dssp HHHHHHHHHHTTTCTTBCCEEE-EEECSS---EEEEEECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhcCCCCccCeEEE-EEEeCC---EEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 34677788776 8999999999 555543 68999999 8999999995543 4999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++++||+|||+++...... +
T Consensus 131 ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~---------------------------------~------------ 165 (345)
T 3a8x_A 131 IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG---------------------------------D------------ 165 (345)
T ss_dssp CBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTT---------------------------------C------------
T ss_pred ceecCCCHHHEEECCCCCEEEEeccccccccCCC---------------------------------C------------
Confidence 9999999999999999999999998874311100 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
.....+||+.|+|||++.+..++.++|||||||++
T Consensus 166 ---------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il 200 (345)
T 3a8x_A 166 ---------------------------------------------TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLM 200 (345)
T ss_dssp ---------------------------------------------CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHH
T ss_pred ---------------------------------------------cccccCCCccccCccccCCCCCChHHhHHHHHHHH
Confidence 00114789999999999998899999999999999
Q ss_pred hhccc---cCCCC--------chHHHHHHHhhcCCCCccccc-cCchHHHHHHHcCCCCCCCCCCh------HHHHcCcc
Q 004989 302 FELFC---PFSTG--------EEKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPKM------GELLQSEF 363 (720)
Q Consensus 302 ~eLlt---pf~~~--------~~~~~~~~~l~~~~~p~~~~~-~~p~~~~Li~~~L~~dP~~Rpta------~eiL~hp~ 363 (720)
|||++ ||... .........+....+. ++. ..+...+||.+||+.||.+||++ .|+++|||
T Consensus 201 ~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~--~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~hp~ 278 (345)
T 3a8x_A 201 FEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR--IPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPF 278 (345)
T ss_dssp HHHHHSSCTTTTTTC-------CHHHHHHHHHHCCCC--CCTTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTSGG
T ss_pred HHHHhCCCCcCCcccccccccccHHHHHHHHHcCCCC--CCCCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcCCc
Confidence 99999 66431 1122233333332211 222 23455699999999999999986 79999999
Q ss_pred cCCC
Q 004989 364 LNEP 367 (720)
Q Consensus 364 ~~~~ 367 (720)
|+..
T Consensus 279 f~~~ 282 (345)
T 3a8x_A 279 FRNV 282 (345)
T ss_dssp GTTC
T ss_pred cCCC
Confidence 9876
No 63
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=7.2e-35 Score=318.62 Aligned_cols=204 Identities=18% Similarity=0.219 Sum_probs=160.2
Q ss_pred hhhhh-cccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 66 SDGVE-LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~-L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
+|..+ +..++|||||++++ ++.+.. .+|+|||| .|++|.+++.+.. .+++..++.++.||+.||.|||++||+
T Consensus 87 ~e~~~ll~~~~hp~Iv~l~~-~~~~~~---~~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~giv 161 (373)
T 2r5t_A 87 SERNVLLKNVKHPFLVGLHF-SFQTAD---KLYFVLDYINGGELFYHLQRER-CFLEPRARFYAAEIASALGYLHSLNIV 161 (373)
T ss_dssp ----CCBCCCCCTTBCCEEE-EEECSS---EEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHhCCCCCCCCEEE-EEEeCC---EEEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCce
Confidence 34434 67799999999999 555543 68999999 8999999995543 489999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.+|++||+|||+++......
T Consensus 162 HrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~------------------------------------------------ 193 (373)
T 2r5t_A 162 YRDLKPENILLDSQGHIVLTDFGLCKENIEHN------------------------------------------------ 193 (373)
T ss_dssp CCCCCGGGEEECTTSCEEECCCCBCGGGBCCC------------------------------------------------
T ss_pred ecCCCHHHEEECCCCCEEEeeCccccccccCC------------------------------------------------
Confidence 99999999999999999999999874210000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......+||+.|+|||++.+..++.++|||||||++||
T Consensus 194 ------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e 231 (373)
T 2r5t_A 194 ------------------------------------------STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYE 231 (373)
T ss_dssp ------------------------------------------CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHH
T ss_pred ------------------------------------------CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHH
Confidence 00011478999999999999999999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCCh----HHHHcCcccCCC
Q 004989 304 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKM----GELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta----~eiL~hp~~~~~ 367 (720)
|++ ||...... ..+..+....+ .+.... +...+||.+||+.||.+||++ .++++||||+..
T Consensus 232 ll~G~~Pf~~~~~~-~~~~~i~~~~~--~~~~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~i~~h~~f~~~ 300 (373)
T 2r5t_A 232 MLYGLPPFYSRNTA-EMYDNILNKPL--QLKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSHVFFSLI 300 (373)
T ss_dssp HHHSSCTTCCSBHH-HHHHHHHHSCC--CCCSSSCHHHHHHHHHHTCSSGGGSTTTTTTHHHHHTSGGGTTC
T ss_pred HHcCCCCCCCCCHH-HHHHHHHhccc--CCCCCCCHHHHHHHHHHcccCHHhCCCCCCCHHHHhCCccccCC
Confidence 999 77665544 34444443322 122233 444599999999999999986 699999999986
No 64
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.5e-34 Score=305.18 Aligned_cols=208 Identities=15% Similarity=0.185 Sum_probs=161.7
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..+|.+++||||+++++ ++.+.. ...+|+|||| .+++|.+++.. ..+++.+++.++.||+.||.|||++||
T Consensus 83 ~~~E~~~l~~l~h~~iv~~~~-~~~~~~-~~~~~lv~e~~~~~~l~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i 158 (298)
T 2zv2_A 83 VYQEIAILKKLDHPNVVKLVE-VLDDPN-EDHLYMVFELVNQGPVMEVPTL--KPLSEDQARFYFQDLIKGIEYLHYQKI 158 (298)
T ss_dssp HHHHHHHHHTCCCTTBCCEEE-EEECSS-SSEEEEEEECCTTCBSCCSSCS--SCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHhCCCCCCCeEEE-EEEcCC-CCEEEEEEecCCCCcHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 347888999999999999999 554422 2368999999 88999886633 359999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.+||+|||++........
T Consensus 159 vH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~---------------------------------------------- 192 (298)
T 2zv2_A 159 IHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDA---------------------------------------------- 192 (298)
T ss_dssp ECCCCCGGGEEECTTSCEEECCCTTCEECSSSSC----------------------------------------------
T ss_pred eccCCCHHHEEECCCCCEEEecCCCccccccccc----------------------------------------------
Confidence 9999999999999999999999988743211100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC---CCccccchhhhc
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP---VSCASDIYRLGV 299 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~---~s~~sDIwSLGv 299 (720)
......||+.|+|||++.+.. ++.++|||||||
T Consensus 193 --------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~ 228 (298)
T 2zv2_A 193 --------------------------------------------LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGV 228 (298)
T ss_dssp --------------------------------------------EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHH
T ss_pred --------------------------------------------cccCCcCCccccChhhhccCCCCCCCchhhhHhHHH
Confidence 001146899999999998765 478899999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcCCCC-ccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCC
Q 004989 300 LLFELFC---PFSTGEEKTRTMSSLRHRVLP-PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 366 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~~~~p-~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~ 366 (720)
++|||++ ||...... .....+.....+ +......+...+||.+||++||.+|||+.|+|+||||+.
T Consensus 229 ~l~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~hp~~~~ 298 (298)
T 2zv2_A 229 TLYCFVFGQCPFMDERIM-CLHSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWVTR 298 (298)
T ss_dssp HHHHHHHSSCSSCCSSHH-HHHHHHHHCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTCHHHHC
T ss_pred HHHHHHHCCCCCCCccHH-HHHHHHhcccCCCCCccccCHHHHHHHHHHhhcChhhCCCHHHHhcCccccC
Confidence 9999999 67655433 333334333332 222223345569999999999999999999999999863
No 65
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=1.5e-34 Score=316.26 Aligned_cols=209 Identities=18% Similarity=0.205 Sum_probs=166.2
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..+|.+++|||||++++ ++.... .+|+|||| .+++|.+++......+++.+++.++.||+.||.|||++||
T Consensus 133 ~~~E~~~l~~l~hpnIv~~~~-~~~~~~---~~~lv~E~~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i 208 (373)
T 2x4f_A 133 VKNEISVMNQLDHANLIQLYD-AFESKN---DIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYI 208 (373)
T ss_dssp HHHHHHHHTTCCCTTBCCEEE-EEECSS---EEEEEEECCTTCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHhCCCCCCCeEEE-EEEECC---EEEEEEeCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 347888999999999999999 555543 57999999 8899999996555569999999999999999999999999
Q ss_pred eeccCCCCcEEE--ccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 143 VVHNVRPSCFVM--SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 143 vHrDLKP~NILl--~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
+||||||+|||+ +.++.+||+|||++.......
T Consensus 209 vH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~--------------------------------------------- 243 (373)
T 2x4f_A 209 LHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE--------------------------------------------- 243 (373)
T ss_dssp ECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC---------------------------------------------
T ss_pred ccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc---------------------------------------------
Confidence 999999999999 466789999998874321110
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhch
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
.....+||+.|+|||++.+..++.++|||||||+
T Consensus 244 ----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~i 277 (373)
T 2x4f_A 244 ----------------------------------------------KLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVI 277 (373)
T ss_dssp ----------------------------------------------BCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHH
T ss_pred ----------------------------------------------ccccccCCCcEeChhhccCCCCCcHHhHHHHHHH
Confidence 0011368999999999998889999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcC-CCCcccccc-CchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 301 LFELFC---PFSTGEEKTRTMSSLRHR-VLPPQLLLK-FPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~-~~p~~~~~~-~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
+|||++ ||............+... .+++..... .+...+||.+||.+||.+|||+.|+|+||||...
T Consensus 278 l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~hp~~~~~ 349 (373)
T 2x4f_A 278 AYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFISKLLIKEKSWRISASEALKHPWLSDH 349 (373)
T ss_dssp HHHHHHSSCTTCCSSHHHHHHHHHHTCCCSCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHCH
T ss_pred HHHHHhCCCCCCCCCHHHHHHHHHhccCCCChhhhccCCHHHHHHHHHHcCCChhhCCCHHHHhcCcCcCCC
Confidence 999999 776655543333333222 223332333 3455599999999999999999999999999875
No 66
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=3.7e-34 Score=300.63 Aligned_cols=209 Identities=17% Similarity=0.218 Sum_probs=159.9
Q ss_pred hhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHH
Q 004989 62 LRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAA 137 (720)
Q Consensus 62 ~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~---~~~~l~~~~~~~i~~QIl~aL~yL 137 (720)
-+..+|..+|.+++||||+++++ ++.+.. .+|+|||| .+++|.+++.. .+..+++..++.++.||+.||.||
T Consensus 65 ~~~~~E~~~l~~l~hp~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~L 140 (285)
T 3is5_A 65 EQIEAEIEVLKSLDHPNIIKIFE-VFEDYH---NMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYF 140 (285)
T ss_dssp HHHHHHHHHHHTCCCTTBCCEEE-EEECSS---EEEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCchHHhHHH-heecCC---eEEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHH
Confidence 34457888999999999999999 555443 57999999 88999999832 235599999999999999999999
Q ss_pred HHCCceeccCCCCcEEEc---cCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhccccccccccc
Q 004989 138 HSQGIVVHNVRPSCFVMS---SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVT 214 (720)
Q Consensus 138 Hs~gIvHrDLKP~NILl~---~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~ 214 (720)
|++||+||||||+||+++ .++.+||+|||.+.......
T Consensus 141 H~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~~--------------------------------------- 181 (285)
T 3is5_A 141 HSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDE--------------------------------------- 181 (285)
T ss_dssp HHTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC--------------------------------------------
T ss_pred HhCCEEECCCCHHHEEEecCCCCCCEEEEeeecceecCCcc---------------------------------------
Confidence 999999999999999994 56789999988874321110
Q ss_pred CCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccc
Q 004989 215 APTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDI 294 (720)
Q Consensus 215 ~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDI 294 (720)
......||+.|+|||++.+ .++.++||
T Consensus 182 ----------------------------------------------------~~~~~~~t~~y~aPE~~~~-~~~~~~Di 208 (285)
T 3is5_A 182 ----------------------------------------------------HSTNAAGTALYMAPEVFKR-DVTFKCDI 208 (285)
T ss_dssp ---------------------------------------------------------CTTGGGCCHHHHTT-CCCHHHHH
T ss_pred ----------------------------------------------------cCcCcccccCcCChHHhcc-CCCcccCe
Confidence 0011368999999999864 58999999
Q ss_pred hhhhchhhhccc---cCCCCchHHHHHHHhh-cCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCC
Q 004989 295 YRLGVLLFELFC---PFSTGEEKTRTMSSLR-HRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 366 (720)
Q Consensus 295 wSLGvll~eLlt---pf~~~~~~~~~~~~l~-~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~ 366 (720)
|||||++|||++ ||.............. ....+.......+...+|+.+||++||.+|||+.|+|+||||++
T Consensus 209 ~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~f~~ 284 (285)
T 3is5_A 209 WSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRPLTPQAVDLLKQMLTKDPERRPSAAQVLHHEWFKQ 284 (285)
T ss_dssp HHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCC--CCCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGGC
T ss_pred ehHHHHHHHHHhCCCCCCCCCHHHHHhhhccCCcccccccCcCCHHHHHHHHHHccCChhhCcCHHHHhcCHHhhc
Confidence 999999999999 6766544322222222 22222222233455669999999999999999999999999985
No 67
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=1.4e-34 Score=318.25 Aligned_cols=213 Identities=18% Similarity=0.263 Sum_probs=162.0
Q ss_pred hchhhhhhcccCC--CCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 63 RKHSDGVELTHGD--HLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~L~~l~--HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+..+|..+|.++. |||||++++ ++.... .+|+|||+.+++|.+++.... .+++.+++.|+.||+.||.|||++
T Consensus 100 ~~~~Ei~~l~~l~~~~~~iv~~~~-~~~~~~---~~~lv~E~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH~~ 174 (390)
T 2zmd_A 100 SYRNEIAYLNKLQQHSDKIIRLYD-YEITDQ---YIYMVMECGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQH 174 (390)
T ss_dssp HHHHHHHHHHHHTTTCTTBCCEEE-EEECSS---EEEEEEECCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcccCCCeEEEEEE-EEecCC---EEEEEEecCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC
Confidence 4447888888886 599999999 554443 589999998899999996544 589999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+|||++ ++.+||+|||++.........
T Consensus 175 ~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~~------------------------------------------- 210 (390)
T 2zmd_A 175 GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS------------------------------------------- 210 (390)
T ss_dssp TCCCCCCCGGGEEES-SSCEEECCCSSSCCC-------------------------------------------------
T ss_pred CeeecCCCHHHEEEE-CCeEEEEecCccccccCCCcc-------------------------------------------
Confidence 999999999999995 689999999988443211000
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC-----------CCCC
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-----------APVS 289 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-----------~~~s 289 (720)
......+||+.|+|||++.+ ..++
T Consensus 211 ---------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~ 245 (390)
T 2zmd_A 211 ---------------------------------------------VVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKIS 245 (390)
T ss_dssp ------------------------------------------------CCSCCCGGGCCHHHHHCC------------CC
T ss_pred ---------------------------------------------ccCCCCCcCCCccChHHhhhccccccccccccCCC
Confidence 00011478999999999975 3589
Q ss_pred ccccchhhhchhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccC
Q 004989 290 CASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLN 365 (720)
Q Consensus 290 ~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~ 365 (720)
.++|||||||+||||++ ||.........+..+........++...+ ...+||.+||..||.+|||+.|+|+||||.
T Consensus 246 ~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~ 325 (390)
T 2zmd_A 246 PKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 325 (390)
T ss_dssp HHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHH
T ss_pred ChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHHhCccccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhhCcCcc
Confidence 99999999999999999 67654443334444443333333333333 455999999999999999999999999998
Q ss_pred CCcc
Q 004989 366 EPRD 369 (720)
Q Consensus 366 ~~~~ 369 (720)
....
T Consensus 326 ~~~~ 329 (390)
T 2zmd_A 326 IQTH 329 (390)
T ss_dssp SCC-
T ss_pred ccCc
Confidence 7643
No 68
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=5.8e-34 Score=304.34 Aligned_cols=209 Identities=18% Similarity=0.257 Sum_probs=167.1
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++||||+++++ ++.+.. .+|+|||| .|++|.+++... ..+++..++.++.||+.||.|||++|
T Consensus 61 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~lH~~~ 135 (321)
T 2a2a_A 61 EIEREVSILRQVLHHNVITLHD-VYENRT---DVVLILELVSGGELFDFLAQK-ESLSEEEATSFIKQILDGVNYLHTKK 135 (321)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EEECSS---EEEEEECCCCSCBHHHHHHTC-SCEEHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCcceEEE-EEecCC---EEEEEEEcCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3447888999999999999999 555443 68999999 799999999654 35999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCC----ceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCC
Q 004989 142 IVVHNVRPSCFVMSSFN----HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~----~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~ 217 (720)
|+||||||+||+++.++ .++|+|||.+.......
T Consensus 136 ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~~~~~------------------------------------------ 173 (321)
T 2a2a_A 136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV------------------------------------------ 173 (321)
T ss_dssp EECCCCSGGGEEESCTTSSSCCEEECCCTTCEECCTTC------------------------------------------
T ss_pred eecCCCChHHEEEecCCCCcCCEEEccCccceecCccc------------------------------------------
Confidence 99999999999999887 79999888874321110
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhh
Q 004989 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRL 297 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSL 297 (720)
......||+.|+|||++.+..++.++|||||
T Consensus 174 -------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~sl 204 (321)
T 2a2a_A 174 -------------------------------------------------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSI 204 (321)
T ss_dssp -------------------------------------------------CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHH
T ss_pred -------------------------------------------------cccccCCCCCccCcccccCCCCCCccccHHH
Confidence 0011368999999999998889999999999
Q ss_pred hchhhhccc---cCCCCchHHHHHHHhhcC--CCCccccccCch-HHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004989 298 GVLLFELFC---PFSTGEEKTRTMSSLRHR--VLPPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 298 Gvll~eLlt---pf~~~~~~~~~~~~l~~~--~~p~~~~~~~p~-~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
||++|+|++ ||...... .....+... .+++.+....+. ..+||.+||++||.+|||+.|+|+||||....
T Consensus 205 G~il~~l~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~hp~~~~~~ 280 (321)
T 2a2a_A 205 GVITYILLSGASPFLGDTKQ-ETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVD 280 (321)
T ss_dssp HHHHHHHHHSCCSSCCSSHH-HHHHHHHTTCCCCCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHSTTTSCSS
T ss_pred HHHHHHHHHCCCCCCCCCHH-HHHHHHHhcccccChhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhcCccccCCC
Confidence 999999999 77665443 333344332 233333344444 45999999999999999999999999998763
No 69
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=9.4e-35 Score=321.63 Aligned_cols=206 Identities=21% Similarity=0.298 Sum_probs=161.6
Q ss_pred hhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCcee
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
+|..+|..++||||+++++ ++.+.. .+|+|||| .|++|.++|.+.+..+++..++.|+.||+.||.|||++||||
T Consensus 110 ~E~~il~~~~hp~Iv~l~~-~~~~~~---~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~giiH 185 (412)
T 2vd5_A 110 EERDVLVNGDRRWITQLHF-AFQDEN---YLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVH 185 (412)
T ss_dssp HHHHHHHHSCTTTBCCEEE-EEECSS---EEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhcCCCCeeeEEE-EEeeCC---EEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeee
Confidence 5666888999999999999 665553 68999999 799999999665556999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccc
Q 004989 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+|||++.++++||+|||++........
T Consensus 186 rDLKp~NILld~~g~vkL~DFGla~~~~~~~~------------------------------------------------ 217 (412)
T 2vd5_A 186 RDIKPDNILLDRCGHIRLADFGSCLKLRADGT------------------------------------------------ 217 (412)
T ss_dssp CCCSGGGEEECTTSCEEECCCTTCEECCTTSC------------------------------------------------
T ss_pred cccCHHHeeecCCCCEEEeechhheeccCCCc------------------------------------------------
Confidence 99999999999999999999998743211100
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCccccc-------CCCCCccccchhh
Q 004989 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-------GAPVSCASDIYRL 297 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~-------~~~~s~~sDIwSL 297 (720)
......+||+.|+|||++. +..|+.++|||||
T Consensus 218 -----------------------------------------~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSl 256 (412)
T 2vd5_A 218 -----------------------------------------VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWAL 256 (412)
T ss_dssp -----------------------------------------EECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHH
T ss_pred -----------------------------------------cccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHH
Confidence 0001147899999999997 3458999999999
Q ss_pred hchhhhccc---cCCCCchHHHHHHHhhc----CCCCccccccC-chHHHHHHHcCCCCCCCC---CChHHHHcCcccCC
Q 004989 298 GVLLFELFC---PFSTGEEKTRTMSSLRH----RVLPPQLLLKF-PKEASFCLWLLHPEPSGR---PKMGELLQSEFLNE 366 (720)
Q Consensus 298 Gvll~eLlt---pf~~~~~~~~~~~~l~~----~~~p~~~~~~~-p~~~~Li~~~L~~dP~~R---pta~eiL~hp~~~~ 366 (720)
||++|||++ ||...... ..+..+.+ ..+|. ..... +...+||.+||. +|.+| |+++||++||||+.
T Consensus 257 GvilyelltG~~Pf~~~~~~-~~~~~i~~~~~~~~~p~-~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hpff~~ 333 (412)
T 2vd5_A 257 GVFAYEMFYGQTPFYADSTA-ETYGKIVHYKEHLSLPL-VDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTHPFFFG 333 (412)
T ss_dssp HHHHHHHHHSSCTTCCSSHH-HHHHHHHTHHHHCCCC-----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTSGGGTT
T ss_pred hHHHHHHHhCCCCCCCCCHH-HHHHHHHhcccCcCCCc-cccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcCCCcCC
Confidence 999999999 77665444 33333322 22232 22333 445599999999 99998 59999999999997
Q ss_pred C
Q 004989 367 P 367 (720)
Q Consensus 367 ~ 367 (720)
.
T Consensus 334 i 334 (412)
T 2vd5_A 334 L 334 (412)
T ss_dssp C
T ss_pred C
Confidence 6
No 70
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=3.6e-34 Score=319.29 Aligned_cols=242 Identities=14% Similarity=0.160 Sum_probs=163.6
Q ss_pred hhchhhhhhcccCCCCCceecccceeecCC--CCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004989 62 LRKHSDGVELTHGDHLRNQGGLSGVCENEA--AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 62 ~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~--~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
.+..+|..+|.+++||||+++++ ++.... ....+|+||||.+++|.+++... ..+++..++.++.||+.||.|||+
T Consensus 70 ~~~~~E~~~l~~l~h~nIv~l~~-~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~-~~l~~~~~~~i~~qil~aL~~LH~ 147 (432)
T 3n9x_A 70 KRILREITILNRLKSDYIIRLYD-LIIPDDLLKFDELYIVLEIADSDLKKLFKTP-IFLTEEHIKTILYNLLLGENFIHE 147 (432)
T ss_dssp HHHHHHHHHHHHCCCTTBCCEEE-ECCCSCTTTCCCEEEEEECCSEEHHHHHHSS-CCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCcceEEE-EEecCCCCcCCeEEEEEecCCcCHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHH
Confidence 35568999999999999999999 443331 22468999999778999999654 449999999999999999999999
Q ss_pred CCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCC
Q 004989 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||+||||||+|||++.++.+||+|||+++........... .++.-..
T Consensus 148 ~givHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~---------------------------~~~~~~~----- 195 (432)
T 3n9x_A 148 SGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIV---------------------------NDLEENE----- 195 (432)
T ss_dssp TTEECCCCCGGGEEECTTCCEEECCCTTCEEC------------------------------------------------
T ss_pred CCCCCCCCCHHHeEECCCCCEEEccCCCccccccccccccc---------------------------ccccccc-----
Confidence 99999999999999999999999999998654322110000 0000000
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccc-cCCCCCccccchhhh
Q 004989 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEEL-AGAPVSCASDIYRLG 298 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l-~~~~~s~~sDIwSLG 298 (720)
. . ...........+..+||++|+|||++ .+..|+.++||||||
T Consensus 196 -----~------~-------------------------~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG 239 (432)
T 3n9x_A 196 -----E------P-------------------------GPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTG 239 (432)
T ss_dssp ---------------------------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHH
T ss_pred -----c------c-------------------------cccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHH
Confidence 0 0 00000000011236899999999986 455599999999999
Q ss_pred chhhhccc-------------cCC-CCch----------------HHHHH------------------------HHhhc-
Q 004989 299 VLLFELFC-------------PFS-TGEE----------------KTRTM------------------------SSLRH- 323 (720)
Q Consensus 299 vll~eLlt-------------pf~-~~~~----------------~~~~~------------------------~~l~~- 323 (720)
|++|||++ |+. +... ....+ ..+..
T Consensus 240 ~il~ell~g~~p~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~ 319 (432)
T 3n9x_A 240 CIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLF 319 (432)
T ss_dssp HHHHHHHTTCTTTCSSGGGCCCSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTS
T ss_pred HHHHHHHhcccccccccccccccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhC
Confidence 99999995 221 1110 00000 00100
Q ss_pred -CCCCc----cccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCccchHH
Q 004989 324 -RVLPP----QLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEE 373 (720)
Q Consensus 324 -~~~p~----~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~l~e 373 (720)
...+. .+....+...+||.+||++||.+|||++|+|+||||+.......+
T Consensus 320 ~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~~~~~e 374 (432)
T 3n9x_A 320 PHRKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKDVRKKKLE 374 (432)
T ss_dssp CCCCCCCHHHHSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTCGGGTTTCCTTTC
T ss_pred CCCCCCCHHHHCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcChhhhhccCcccC
Confidence 00000 012233455699999999999999999999999999998654433
No 71
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=3.6e-34 Score=301.43 Aligned_cols=228 Identities=22% Similarity=0.302 Sum_probs=167.9
Q ss_pred chhhhhhcccCCCCCceecccceeecC---------CCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHH
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENE---------AAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEI 133 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~---------~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~a 133 (720)
..+|..++.+++||||+++++.+.... .....+|+|||| .|++|.+++......+++..++.++.||+.|
T Consensus 49 ~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~ 128 (303)
T 1zy4_A 49 ILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEA 128 (303)
T ss_dssp HHHHHHHHTTCCCTTBCCEEEEEEECCCCCC------CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcccccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHH
Confidence 347888999999999999999443321 123468999999 7899999997655568999999999999999
Q ss_pred HHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccc
Q 004989 134 VYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLV 213 (720)
Q Consensus 134 L~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla 213 (720)
|.|||++||+||||||+|||++.++.++|+|||.+......... ..+.
T Consensus 129 l~~LH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~------------------------------~~~~-- 176 (303)
T 1zy4_A 129 LSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDI------------------------------LKLD-- 176 (303)
T ss_dssp HHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCCCSCTTC----------------------------------------
T ss_pred HHHHHhCCeecccCCHHhEEEcCCCCEEEeeCcchhhcccccch------------------------------hccc--
Confidence 99999999999999999999999999999999988543221000 0000
Q ss_pred cCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC-CCCccc
Q 004989 214 TAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCAS 292 (720)
Q Consensus 214 ~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~s 292 (720)
. . .. ...........||+.|+|||++.+. .++.++
T Consensus 177 ---~-------~--------------------~~--------------~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~ 212 (303)
T 1zy4_A 177 ---S-------Q--------------------NL--------------PGSSDNLTSAIGTAMYVATEVLDGTGHYNEKI 212 (303)
T ss_dssp -------------------------------------------------------------CTTSCHHHHTSCSCCCTHH
T ss_pred ---c-------c--------------------cc--------------cccccccccCCCcccccCcccccCCCCCcchh
Confidence 0 0 00 0000001124789999999999865 589999
Q ss_pred cchhhhchhhhccccCCCCchHHHHHHHhhcC--CCCccccccCch-HHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 293 DIYRLGVLLFELFCPFSTGEEKTRTMSSLRHR--VLPPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 293 DIwSLGvll~eLltpf~~~~~~~~~~~~l~~~--~~p~~~~~~~p~-~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|||||||++|||++||............+... .+|+.+....+. ..+|+.+||++||.+|||+.++++||||...
T Consensus 213 Di~slG~il~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~ 290 (303)
T 1zy4_A 213 DMYSLGIIFFEMIYPFSTGMERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPVK 290 (303)
T ss_dssp HHHHHHHHHHHHHSCCSSHHHHHHHHHHHHSTTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHSSCSCCC
T ss_pred hHHHHHHHHHHHHhccCCchhHHHHHHhccccccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCCCCcCCC
Confidence 99999999999999988765554555555432 344444444444 4599999999999999999999999999875
No 72
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=2.7e-34 Score=307.58 Aligned_cols=213 Identities=15% Similarity=0.179 Sum_probs=162.4
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
+..+|..+|.+++||||+++++ ++.... .+++||||.+++|.+++...+..+++..++.++.||+.||.|||++||
T Consensus 46 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i 121 (324)
T 3mtl_A 46 TAIREVSLLKDLKHANIVTLHD-IIHTEK---SLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKV 121 (324)
T ss_dssp CCCCCHHHHSCCCCTTBCCEEE-EEECSS---CEEEEEECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred hHHHHHHHHHhcCCCCCCeeee-EEeeCC---EEEEEecccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 3346888999999999999999 555443 579999997779999997666679999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.+||+|||.+...+....
T Consensus 122 vH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~---------------------------------------------- 155 (324)
T 3mtl_A 122 LHRDLKPQNLLINERGELKLADFGLARAKSIPTK---------------------------------------------- 155 (324)
T ss_dssp EESSCCGGGEEECTTCCEEECSSSEEECC---------------------------------------------------
T ss_pred cCCCcCHHHEEECCCCCEEEccCcccccccCCcc----------------------------------------------
Confidence 9999999999999999999999998743211100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC-CCCCccccchhhhchh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLL 301 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sDIwSLGvll 301 (720)
......||++|+|||++.+ ..++.++|||||||++
T Consensus 156 --------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il 191 (324)
T 3mtl_A 156 --------------------------------------------TYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIF 191 (324)
T ss_dssp ---------------------------------------------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHH
T ss_pred --------------------------------------------ccccccCcccccChhhhcCCCCCCcHHHHHHHHHHH
Confidence 0011367999999999987 4589999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhh--cCCCCccc--------------------------cccCchHHHHHHHcCCCCCC
Q 004989 302 FELFC---PFSTGEEKTRTMSSLR--HRVLPPQL--------------------------LLKFPKEASFCLWLLHPEPS 350 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~--~~~~p~~~--------------------------~~~~p~~~~Li~~~L~~dP~ 350 (720)
|+|++ ||.............. ....+..+ ....+...+||.+||++||.
T Consensus 192 ~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~ 271 (324)
T 3mtl_A 192 YEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGR 271 (324)
T ss_dssp HHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGG
T ss_pred HHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcc
Confidence 99999 6766544332222211 11111100 01223445999999999999
Q ss_pred CCCChHHHHcCcccCCCcc
Q 004989 351 GRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 351 ~Rpta~eiL~hp~~~~~~~ 369 (720)
+|||+.|+|+||||.....
T Consensus 272 ~R~t~~e~l~hp~f~~~~~ 290 (324)
T 3mtl_A 272 NRISAEDAMKHPFFLSLGE 290 (324)
T ss_dssp GSCCHHHHTTSGGGGGGCS
T ss_pred cCCCHHHHhcChhhhhccc
Confidence 9999999999999998754
No 73
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=3.7e-34 Score=299.45 Aligned_cols=211 Identities=19% Similarity=0.215 Sum_probs=166.1
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++.+++||||+++++ ++.... ..+++||| .|++|.+++... ..+++..++.++.||+.||.|||++|
T Consensus 51 ~~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~~v~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~ 125 (284)
T 3kk8_A 51 KLEREARICRKLQHPNIVRLHD-SIQEES---FHYLVFDLVTGGELFEDIVAR-EFYSEADASHCIQQILESIAYCHSNG 125 (284)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EEECSS---EEEEEECCCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCCCcCeEEE-EEEcCC---EEEEEEecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 4457888999999999999999 555443 57999999 889999988544 34999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCc---eEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCC
Q 004989 142 IVVHNVRPSCFVMSSFNH---VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~---vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
|+||||||+||+++.++. +||+|||.+...+...
T Consensus 126 i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~------------------------------------------- 162 (284)
T 3kk8_A 126 IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE------------------------------------------- 162 (284)
T ss_dssp EECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSSC-------------------------------------------
T ss_pred cCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccCc-------------------------------------------
Confidence 999999999999986655 9999888873321110
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhh
Q 004989 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
......||+.|+|||++.+..++.++||||||
T Consensus 163 ------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG 194 (284)
T 3kk8_A 163 ------------------------------------------------AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACG 194 (284)
T ss_dssp ------------------------------------------------BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHH
T ss_pred ------------------------------------------------cccCCCCCcCCcCchhhcCCCCCcccchHHHH
Confidence 00113689999999999999899999999999
Q ss_pred chhhhccc---cCCCCchHHHHHHHhhcCC--CCccc-cccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCccc
Q 004989 299 VLLFELFC---PFSTGEEKTRTMSSLRHRV--LPPQL-LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~--~p~~~-~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
|++|+|++ ||...... .....+.... .+... ....+...+|+.+||++||.+|||+.|+|+||||+.....
T Consensus 195 ~~l~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~~ 271 (284)
T 3kk8_A 195 VILYILLVGYPPFWDEDQH-RLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNRERV 271 (284)
T ss_dssp HHHHHHHHSSCSSCCSSHH-HHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTSHHHHSCCCG
T ss_pred HHHHHHHHCCCCCCCCchh-HHHHHHHhccccCCchhhcccCHHHHHHHHHHcccChhhCCCHHHHhcCccccCChhH
Confidence 99999999 66655443 3333333322 22222 2333455699999999999999999999999999887443
No 74
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=3.4e-34 Score=320.70 Aligned_cols=207 Identities=17% Similarity=0.252 Sum_probs=161.1
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH-C
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-Q 140 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs-~ 140 (720)
+..+|..+|..++||||+++++ ++.... .+|+|||| .|++|.+++.... .+++..++.++.||+.||.|||+ +
T Consensus 194 ~~~~e~~~l~~l~h~~iv~l~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~ 268 (446)
T 4ejn_A 194 HTLTENRVLQNSRHPFLTALKY-SFQTHD---RLCFVMEYANGGELFFHLSRER-VFSEDRARFYGAEIVSALDYLHSEK 268 (446)
T ss_dssp -------CCCCCSCTTSCCEEE-EEEETT---EEEEEECCCSSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCCCCeEeeEEE-EEeeCC---EEEEEEeeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHhhcC
Confidence 3446778999999999999999 555443 57999999 8999999995443 49999999999999999999998 9
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
|||||||||+|||++.++.+||+|||++........
T Consensus 269 giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~-------------------------------------------- 304 (446)
T 4ejn_A 269 NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA-------------------------------------------- 304 (446)
T ss_dssp CCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC-----------------------------------------------
T ss_pred CEEECCCCHHHEEECCCCCEEEccCCCceeccCCCc--------------------------------------------
Confidence 999999999999999999999999998743211100
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhch
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
.....+||+.|+|||++.+..|+.++|||||||+
T Consensus 305 ----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~i 338 (446)
T 4ejn_A 305 ----------------------------------------------TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVV 338 (446)
T ss_dssp ------------------------------------------------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHH
T ss_pred ----------------------------------------------ccccccCCccccCHhhcCCCCCCCccchhhhHHH
Confidence 0011478999999999999999999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCccccc-cCchHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC
Q 004989 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 367 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~-~~p~~~~Li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~ 367 (720)
+|||++ ||...... .....+....++ ++. ..+...+||.+||++||.+|| ++.|+|+||||+..
T Consensus 339 l~ell~g~~Pf~~~~~~-~~~~~i~~~~~~--~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~hp~f~~~ 411 (446)
T 4ejn_A 339 MYEMMCGRLPFYNQDHE-KLFELILMEEIR--FPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGI 411 (446)
T ss_dssp HHHHHHSSCSSCCSSHH-HHHHHHHHCCCC--CCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTC
T ss_pred HHHHhhCCCCCCCCCHH-HHHHHHHhCCCC--CCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhCccccCC
Confidence 999999 77665544 333333322221 112 234556999999999999999 99999999999986
No 75
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=2.5e-34 Score=312.08 Aligned_cols=206 Identities=16% Similarity=0.225 Sum_probs=164.0
Q ss_pred chhhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 64 KHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 64 ~~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
..+|..+|..+ +||||+++++ ++++.. .+|+|||| .|++|.+++.+.+ .+++..++.++.||+.||.|||++|
T Consensus 67 ~~~E~~~l~~~~~hp~iv~l~~-~~~~~~---~~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~g 141 (353)
T 2i0e_A 67 TMVEKRVLALPGKPPFLTQLHS-CFQTMD---RLYFVMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFLQSKG 141 (353)
T ss_dssp HHHHHHHHTCTTCCTTBCCEEE-EEECSS---EEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhcCCCCEEeeEEE-EEEcCC---EEEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 33666778776 8999999999 555543 68999999 8999999996543 4999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.+|++||+|||++........
T Consensus 142 ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~--------------------------------------------- 176 (353)
T 2i0e_A 142 IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV--------------------------------------------- 176 (353)
T ss_dssp CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTC---------------------------------------------
T ss_pred EEeccCCHHHEEEcCCCcEEEEeCCcccccccCCc---------------------------------------------
Confidence 99999999999999999999999998743211000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
.....+||+.|+|||++.+..++.++|||||||++
T Consensus 177 ---------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il 211 (353)
T 2i0e_A 177 ---------------------------------------------TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLL 211 (353)
T ss_dssp ---------------------------------------------CBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHH
T ss_pred ---------------------------------------------ccccccCCccccChhhhcCCCcCCcccccchHHHH
Confidence 00114789999999999999999999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCC-----hHHHHcCcccCCC
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpt-----a~eiL~hp~~~~~ 367 (720)
|||++ ||...... ..+..+....+. ++..+ +...+||.+||+.||.+||+ +.+|++||||+..
T Consensus 212 ~ell~G~~Pf~~~~~~-~~~~~i~~~~~~--~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h~~f~~~ 283 (353)
T 2i0e_A 212 YEMLAGQAPFEGEDED-ELFQSIMEHNVA--YPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYI 283 (353)
T ss_dssp HHHHHSSCSSCCSSHH-HHHHHHHHCCCC--CCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTSGGGTTC
T ss_pred HHHHcCCCCCCCCCHH-HHHHHHHhCCCC--CCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCccccCC
Confidence 99999 77665444 344444433221 22233 44559999999999999994 6999999999876
No 76
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=1.2e-33 Score=302.32 Aligned_cols=208 Identities=17% Similarity=0.280 Sum_probs=165.8
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++.+++||||+++++ ++.... ..|+|||| .|++|.+++.+. .+++..+..++.||+.||.|||++||
T Consensus 89 ~~~E~~~l~~l~h~niv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~--~l~~~~~~~i~~qi~~~L~~LH~~~i 162 (321)
T 2c30_A 89 LFNEVVIMRDYQHFNVVEMYK-SYLVGE---ELWVLMEFLQGGALTDIVSQV--RLNEEQIATVCEAVLQALAYLHAQGV 162 (321)
T ss_dssp HHHHHHHHTTCCCTTBCCEEE-EEEETT---EEEEEECCCCSCBHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHhCCCCCcceEEE-EEEECC---EEEEEEecCCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 347888999999999999999 554443 57999999 899999998543 49999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.+||+|||++........
T Consensus 163 vH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~---------------------------------------------- 196 (321)
T 2c30_A 163 IHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVP---------------------------------------------- 196 (321)
T ss_dssp ECCCCSGGGEEECTTCCEEECCCTTCEECCSSSC----------------------------------------------
T ss_pred ecCCCCHHHEEECCCCcEEEeeeeeeeecccCcc----------------------------------------------
Confidence 9999999999999999999999988743211100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......||+.|+|||++.+..++.++|||||||++|
T Consensus 197 --------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~ 232 (321)
T 2c30_A 197 --------------------------------------------KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVI 232 (321)
T ss_dssp --------------------------------------------CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHH
T ss_pred --------------------------------------------ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHH
Confidence 001146899999999999988999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCCCc-ccccc-CchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004989 303 ELFC---PFSTGEEKTRTMSSLRHRVLPP-QLLLK-FPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~~p~-~~~~~-~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
||++ ||...... ..+..+.....+. ..... .+...+|+.+||+.||.+|||+.|+|+||||....
T Consensus 233 el~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~~~ 302 (321)
T 2c30_A 233 EMVDGEPPYFSDSPV-QAMKRLRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQERATAQELLDHPFLLQTG 302 (321)
T ss_dssp HHHHSSCTTTTSCHH-HHHHHHHHSSCCCCTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGGGCC
T ss_pred HHHhCCCCCCCCCHH-HHHHHHhcCCCCCcCccccCCHHHHHHHHHHccCChhhCcCHHHHhcChhhccCC
Confidence 9999 66655443 3344444433222 11222 34455999999999999999999999999998753
No 77
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=2.3e-34 Score=308.83 Aligned_cols=210 Identities=17% Similarity=0.205 Sum_probs=157.7
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
+..+|..+|.+++||||+++++ ++.... .+|+||||.+++|.+++.... .+++..++.|+.||+.||.|||++||
T Consensus 79 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~L~~~~~~~~-~~~~~~~~~i~~ql~~~l~~LH~~~i 153 (329)
T 3gbz_A 79 TAIREVSLLKELQHRNIIELKS-VIHHNH---RLHLIFEYAENDLKKYMDKNP-DVSMRVIKSFLYQLINGVNFCHSRRC 153 (329)
T ss_dssp -CHHHHHHGGGCCCTTBCCEEE-EEEETT---EEEEEEECCSEEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred hHHHHHHHHHHcCCCCcceEEE-EEecCC---EEEEEEecCCCCHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence 3447888999999999999999 555443 689999996679999996544 49999999999999999999999999
Q ss_pred eeccCCCCcEEEc-----cCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCC
Q 004989 143 VVHNVRPSCFVMS-----SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 143 vHrDLKP~NILl~-----~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~ 217 (720)
+||||||+|||++ ..+.+||+|||++...+....
T Consensus 154 vH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~~~~----------------------------------------- 192 (329)
T 3gbz_A 154 LHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIR----------------------------------------- 192 (329)
T ss_dssp CCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC---------------------------------------------
T ss_pred ECCCCCHHHEEEecCCCCccceEEECcCCCccccCCccc-----------------------------------------
Confidence 9999999999995 445599998888743211100
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC-CCccccchh
Q 004989 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYR 296 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwS 296 (720)
.....+||+.|+|||++.+.. ++.++||||
T Consensus 193 -------------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~Diws 223 (329)
T 3gbz_A 193 -------------------------------------------------QFTHEIITLWYRPPEILLGSRHYSTSVDIWS 223 (329)
T ss_dssp --------------------------------------------------------CCTTCCHHHHTTCCCCCTHHHHHH
T ss_pred -------------------------------------------------ccCCCcCCccccCHHHhcCCCCCCcHHHHHH
Confidence 001146799999999998755 899999999
Q ss_pred hhchhhhccc---cCCCCchHHHHHHHhhcCCCCcc---------------------------ccc-cCchHHHHHHHcC
Q 004989 297 LGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQ---------------------------LLL-KFPKEASFCLWLL 345 (720)
Q Consensus 297 LGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~---------------------------~~~-~~p~~~~Li~~~L 345 (720)
|||++|||++ ||............+.....|+. +.. ..+...+||.+||
T Consensus 224 lG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L 303 (329)
T 3gbz_A 224 IACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAML 303 (329)
T ss_dssp HHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHT
T ss_pred HHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHc
Confidence 9999999999 67665554333333221111110 000 1234459999999
Q ss_pred CCCCCCCCChHHHHcCcccCCC
Q 004989 346 HPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 346 ~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
++||.+|||+.|+|+||||+..
T Consensus 304 ~~dP~~R~t~~e~l~hp~f~~~ 325 (329)
T 3gbz_A 304 EMDPVKRISAKNALEHPYFSHN 325 (329)
T ss_dssp CSSGGGSCCHHHHHTSGGGSSS
T ss_pred cCChhhCCCHHHHhCCcccCCC
Confidence 9999999999999999999975
No 78
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=1.1e-33 Score=320.10 Aligned_cols=207 Identities=18% Similarity=0.212 Sum_probs=164.2
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++|||||++++ ++.+.. .+|+|||| .|++|.+++.... .+++.+++.++.||+.||.|||++|
T Consensus 67 ~~~~E~~~l~~l~hpniv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~al~~lH~~~ 141 (486)
T 3mwu_A 67 TILREVELLKKLDHPNIMKLFE-ILEDSS---SFYIVGELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMHKHN 141 (486)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EEECSS---EEEEEECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCcCeEEE-EEEcCC---EEEEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3447888999999999999999 565543 68999999 8999999985443 4999999999999999999999999
Q ss_pred ceeccCCCCcEEEc---cCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCC
Q 004989 142 IVVHNVRPSCFVMS---SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 142 IvHrDLKP~NILl~---~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
|+||||||+|||++ .++.+||+|||++.......
T Consensus 142 ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~------------------------------------------- 178 (486)
T 3mwu_A 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT------------------------------------------- 178 (486)
T ss_dssp CCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC--------------------------------------------
T ss_pred eEeccCchHHEEEecCCCCCCEEEEECCcCeECCCCC-------------------------------------------
Confidence 99999999999995 45679999888874321110
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhh
Q 004989 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
.....+||+.|+|||++.+. |+.++||||||
T Consensus 179 ------------------------------------------------~~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG 209 (486)
T 3mwu_A 179 ------------------------------------------------KMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAG 209 (486)
T ss_dssp ---------------------------------------------------CCTTGGGGCCGGGGGSC-CCHHHHHHHHH
T ss_pred ------------------------------------------------ccCCCcCCCCCCCHHHhCCC-CCchhhHHHHH
Confidence 00114689999999999875 99999999999
Q ss_pred chhhhccc---cCCCCchHHHHHHHhhcCCCC---ccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 299 VLLFELFC---PFSTGEEKTRTMSSLRHRVLP---PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~~p---~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|++|+|++ ||...... .....+..+.++ +.+....+...+||.+||++||.+|||+.++|+||||+..
T Consensus 210 ~il~~ll~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~hp~~~~~ 283 (486)
T 3mwu_A 210 VILYILLSGTPPFYGKNEY-DILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKY 283 (486)
T ss_dssp HHHHHHHHSSCSSCCSSHH-HHHHHHHHTCCCSCSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHCHHHHHT
T ss_pred HHHHHHHhCCCCCCCCCHH-HHHHHHHhCCCCCCCcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCHhhccC
Confidence 99999999 67665444 344444444332 2223334455699999999999999999999999999865
No 79
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=3.3e-34 Score=299.36 Aligned_cols=225 Identities=16% Similarity=0.139 Sum_probs=153.3
Q ss_pred hhhchhhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC---CCCCCHHHHHHHHHHHHHHHH
Q 004989 61 ELRKHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---KRSVDVYECLHIFRQIVEIVY 135 (720)
Q Consensus 61 ~~r~~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~---~~~l~~~~~~~i~~QIl~aL~ 135 (720)
..+..+|...+..+ +||||+++++ ++.+.. .+++|||| .|++|.+++... ...+++.+++.++.||+.||.
T Consensus 54 ~~~~~~e~~~~~~l~~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~ 129 (289)
T 1x8b_A 54 EQNALREVYAHAVLGQHSHVVRYFS-AWAEDD---HMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLR 129 (289)
T ss_dssp HHHHHHHHHHHHHSCSCTTBCCEEE-EEEETT---EEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCeeeeee-eeecCC---eEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHH
Confidence 33445777788887 9999999999 554443 67999999 789999999442 245899999999999999999
Q ss_pred HHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccC
Q 004989 136 AAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 215 (720)
Q Consensus 136 yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~ 215 (720)
|||++||+||||||+|||++.++...+.+.... ..++......++++|||.+..
T Consensus 130 ~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~kl~Dfg~~~~ 183 (289)
T 1x8b_A 130 YIHSMSLVHMDIKPSNIFISRTSIPNAASEEGD--------------------------EDDWASNKVMFKIGDLGHVTR 183 (289)
T ss_dssp HHHHTTEECSCCSGGGEEEC----------------------------------------------CCCEEECCCTTCEE
T ss_pred HHHhCCEeecCCCHHHEEEcCCCCCcccccccc--------------------------cccccCCceEEEEcccccccc
Confidence 999999999999999999997664333221110 001111122344555554432
Q ss_pred CCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC-CCCccccc
Q 004989 216 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDI 294 (720)
Q Consensus 216 ~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDI 294 (720)
.... ....||+.|+|||++.+. .++.++||
T Consensus 184 ~~~~-------------------------------------------------~~~~gt~~y~aPE~~~~~~~~~~~~Di 214 (289)
T 1x8b_A 184 ISSP-------------------------------------------------QVEEGDSRFLANEVLQENYTHLPKADI 214 (289)
T ss_dssp TTCS-------------------------------------------------CCCCCCGGGCCHHHHTTCCTTHHHHHH
T ss_pred cCCc-------------------------------------------------cccCCCccccChhHhcCCCCCCchhhH
Confidence 1100 013579999999999876 47789999
Q ss_pred hhhhchhhhccc--cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 295 YRLGVLLFELFC--PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 295 wSLGvll~eLlt--pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|||||++|+|++ |+..... ....+.....+.......+...+|+.+||++||.+|||+.|+|+||||...
T Consensus 215 ~slG~il~~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~ 286 (289)
T 1x8b_A 215 FALALTVVCAAGAEPLPRNGD---QWHEIRQGRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLLSA 286 (289)
T ss_dssp HHHHHHHHHHTTCCCCCSSSH---HHHHHHTTCCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTCTTC---
T ss_pred HHHHHHHHHHhcCCCCCcchh---HHHHHHcCCCCCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhhChHhhhh
Confidence 999999999999 3332222 233344444433322333455699999999999999999999999999875
No 80
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=2.4e-34 Score=323.94 Aligned_cols=207 Identities=17% Similarity=0.262 Sum_probs=166.2
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|..++||||+++++ ++.... .+|+|||| .|++|.+++.+. ..+++.+++.++.||+.||.|||++|
T Consensus 62 ~~~~Ei~~l~~l~HpnIv~l~~-~~~~~~---~~~lv~E~~~gg~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~g 136 (476)
T 2y94_A 62 KIRREIQNLKLFRHPHIIKLYQ-VISTPS---DIFMVMEYVSGGELFDYICKN-GRLDEKESRRLFQQILSGVDYCHRHM 136 (476)
T ss_dssp HHHHHHHHHTTCCCTTBCCEEE-EEECSS---EEEEEEECCSSEEHHHHTTSS-SSCCHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHhCCCCCCCcEEE-EEEECC---EEEEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 4447888999999999999999 555543 57999999 799999999554 35999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||++...... .+
T Consensus 137 ivHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~----------------------------------~~----------- 171 (476)
T 2y94_A 137 VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG----------------------------------EF----------- 171 (476)
T ss_dssp EECSCCSGGGEEECTTCCEEECCCSSCEECCTT----------------------------------CC-----------
T ss_pred CCcccccHHHEEEecCCCeEEEeccchhhcccc----------------------------------cc-----------
Confidence 999999999999999999999999887432110 00
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCC-Cccccchhhhch
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYRLGVL 300 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~-s~~sDIwSLGvl 300 (720)
....+||+.|+|||++.+..+ +.++|||||||+
T Consensus 172 ----------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvi 205 (476)
T 2y94_A 172 ----------------------------------------------LRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVI 205 (476)
T ss_dssp ----------------------------------------------BCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHH
T ss_pred ----------------------------------------------ccccCCCcCeEChhhccCCCCCCCcceehhhHHH
Confidence 011468999999999998875 789999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
+|+|++ ||...... .....+..+.+.. .....+...+||.+||+.||.+|||+.|+++||||+..
T Consensus 206 l~elltG~~Pf~~~~~~-~~~~~i~~~~~~~-p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~hp~~~~~ 273 (476)
T 2y94_A 206 LYALLCGTLPFDDDHVP-TLFKKICDGIFYT-PQYLNPSVISLLKHMLQVDPMKRATIKDIREHEWFKQD 273 (476)
T ss_dssp HHHHHHSSCSSCCSSSH-HHHHHHHTTCCCC-CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHTT
T ss_pred HHHHhhCCCCCCCCCHH-HHHHHHhcCCcCC-CccCCHHHHHHHHHHcCCCchhCcCHHHHHhCHHhhhc
Confidence 999999 67655443 3444444443321 11223455699999999999999999999999999864
No 81
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=1.3e-34 Score=315.27 Aligned_cols=220 Identities=15% Similarity=0.158 Sum_probs=165.1
Q ss_pred hchhhhhhcccCCCCCceecccceeecC--CCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENE--AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~--~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+..+|..+|.+++||||+++++ ++... .....+|+||||.+++|.+++... .+++.+++.|+.||+.||.|||++
T Consensus 71 ~~~~E~~~l~~l~h~niv~~~~-~~~~~~~~~~~~~~iv~e~~~~~L~~~l~~~--~~~~~~~~~i~~qi~~aL~~LH~~ 147 (364)
T 3qyz_A 71 RTLREIKILLRFRHENIIGIND-IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ--HLSNDHICYFLYQILRGLKYIHSA 147 (364)
T ss_dssp HHHHHHHHHHHCCCTTBCCCCE-EECCSSTTTCCCEEEEEECCSEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcCCCCCcccee-EEecCCccccceEEEEEcccCcCHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHC
Confidence 4458888999999999999999 44332 233468999999778999999653 399999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+|||++.++.+||+|||.+....... +.
T Consensus 148 ~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~---------------------------------~~---------- 184 (364)
T 3qyz_A 148 NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH---------------------------------DH---------- 184 (364)
T ss_dssp TEECCCCCGGGEEECTTCCEEECCCTTCEECCGGG---------------------------------CB----------
T ss_pred CeecCCCChHhEEECCCCCEEEEeCcceEecCCCC---------------------------------Cc----------
Confidence 99999999999999999999999999884321110 00
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC-CCccccchhhhc
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGV 299 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGv 299 (720)
.......+||++|+|||++.+.. ++.++|||||||
T Consensus 185 --------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~ 220 (364)
T 3qyz_A 185 --------------------------------------------TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGC 220 (364)
T ss_dssp --------------------------------------------CCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHH
T ss_pred --------------------------------------------cccccccccccCCCCCHHhcCCCCCCcchhHHHHHH
Confidence 00001147899999999876544 899999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhc-CCCC---------------------------ccc-cccCchHHHHHHHcCCC
Q 004989 300 LLFELFC---PFSTGEEKTRTMSSLRH-RVLP---------------------------PQL-LLKFPKEASFCLWLLHP 347 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~-~~~p---------------------------~~~-~~~~p~~~~Li~~~L~~ 347 (720)
++|+|++ ||............+.. +..+ ..+ ....+...+||.+||.+
T Consensus 221 il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~ 300 (364)
T 3qyz_A 221 ILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTF 300 (364)
T ss_dssp HHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCS
T ss_pred HHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCC
Confidence 9999999 67655433221111110 0000 001 12234456999999999
Q ss_pred CCCCCCChHHHHcCcccCCCccchH
Q 004989 348 EPSGRPKMGELLQSEFLNEPRDSME 372 (720)
Q Consensus 348 dP~~Rpta~eiL~hp~~~~~~~~l~ 372 (720)
||.+|||+.|+|+||||+....+..
T Consensus 301 dP~~R~t~~e~l~hp~~~~~~~~~~ 325 (364)
T 3qyz_A 301 NPHKRIEVEQALAHPYLEQYYDPSD 325 (364)
T ss_dssp STTTSCCHHHHHTSGGGTTTCCGGG
T ss_pred ChhhCCCHHHHhcCcchhhccCccc
Confidence 9999999999999999998755443
No 82
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=6.8e-34 Score=306.31 Aligned_cols=203 Identities=24% Similarity=0.337 Sum_probs=160.6
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CC-CCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GD-VSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~g-gsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+..+|..+|.+++||||+++++ ++.+.. .+++|||| .+ .+|.+++.... .+++..++.|+.||+.||.|||++
T Consensus 75 ~~~~E~~~l~~l~h~~Iv~~~~-~~~~~~---~~~lv~e~~~~g~~l~~~~~~~~-~l~~~~~~~i~~qi~~~L~~LH~~ 149 (335)
T 3dls_A 75 KVTLEIAILSRVEHANIIKVLD-IFENQG---FFQLVMEKHGSGLDLFAFIDRHP-RLDEPLASYIFRQLVSAVGYLRLK 149 (335)
T ss_dssp EEEHHHHHHTTCCCTTBCCEEE-EEECSS---EEEEEEECCTTSCBHHHHHHTCC-CCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCCCCCEeeEEE-EEeeCC---EEEEEEEeCCCCccHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC
Confidence 4447888999999999999999 555543 67999998 44 49999996554 499999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+|||++.++.+||+|||++.......
T Consensus 150 ~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~--------------------------------------------- 184 (335)
T 3dls_A 150 DIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGK--------------------------------------------- 184 (335)
T ss_dssp TEECSCCSGGGEEECTTSCEEECCCTTCEECCTTC---------------------------------------------
T ss_pred CeEEeccCHHHEEEcCCCcEEEeecccceECCCCC---------------------------------------------
Confidence 99999999999999999999999998874321110
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCC-Cccccchhhhc
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYRLGV 299 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~-s~~sDIwSLGv 299 (720)
......||+.|+|||++.+..+ +.++|||||||
T Consensus 185 ----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~ 218 (335)
T 3dls_A 185 ----------------------------------------------LFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGV 218 (335)
T ss_dssp ----------------------------------------------CBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHH
T ss_pred ----------------------------------------------ceeccCCCccccChhhhcCCCCCCCcccchhHHH
Confidence 0011468999999999998876 88999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004989 300 LLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
++|||++ ||..... .+.....++. ...+...+||.+||++||.+|||+.++|+||||+....
T Consensus 219 il~el~~g~~pf~~~~~------~~~~~~~~~~--~~~~~l~~li~~~L~~dP~~Rps~~ell~hp~~~~~~~ 283 (335)
T 3dls_A 219 TLYTLVFEENPFCELEE------TVEAAIHPPY--LVSKELMSLVSGLLQPVPERRTTLEKLVTDPWVTQPVN 283 (335)
T ss_dssp HHHHHHHSSCSCSSGGG------GTTTCCCCSS--CCCHHHHHHHHHHTCSSGGGSCCHHHHHHCTTTTCCCC
T ss_pred HHHHHHhCCCchhhHHH------HHhhccCCCc--ccCHHHHHHHHHHccCChhhCcCHHHHhcCccccCCcc
Confidence 9999999 5544221 1111111211 12344569999999999999999999999999988643
No 83
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=9.5e-35 Score=309.04 Aligned_cols=216 Identities=18% Similarity=0.289 Sum_probs=167.1
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++.+++||||+++++.+..........|+|||| .|++|.+++...+ .+++.+++.++.||+.||.|||++|
T Consensus 58 ~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~ 136 (311)
T 3ork_A 58 RFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG-PMTPKRAIEVIADACQALNFSHQNG 136 (311)
T ss_dssp HHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEEEEEEECCCEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCCCCcceEEEeeeccCCCCcccEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 4558888999999999999999444444433456999999 7899999995443 4999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||++.........
T Consensus 137 ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~-------------------------------------------- 172 (311)
T 3ork_A 137 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNS-------------------------------------------- 172 (311)
T ss_dssp CCCCCCCGGGEEEETTSCEEECCCSCC-----------------------------------------------------
T ss_pred CCcCCCCHHHEEEcCCCCEEEeeccCcccccccccc--------------------------------------------
Confidence 999999999999999999999999988433211000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
........||+.|+|||++.+..++.++|||||||++
T Consensus 173 -------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l 209 (311)
T 3ork_A 173 -------------------------------------------VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVL 209 (311)
T ss_dssp ----------------------------------------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHH
T ss_pred -------------------------------------------cccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHH
Confidence 0000114689999999999999999999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccc-cccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCC
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQL-LLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNE 366 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~-~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~ 366 (720)
|||++ ||............+.....++.. ...++ ...+||.+||+.||.+||++.++|.|+|++.
T Consensus 210 ~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 279 (311)
T 3ork_A 210 YEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRV 279 (311)
T ss_dssp HHHHHSSCSCCCSSHHHHHHHHHHCCCCCHHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred HHHHhCCCCCCCCChHHHHHHHhcCCCCCcccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHH
Confidence 99999 777766655555555555444432 23344 4459999999999999999999999999764
No 84
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=7.5e-34 Score=313.76 Aligned_cols=217 Identities=16% Similarity=0.151 Sum_probs=154.8
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhC--------CCCCCCHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK--------PKRSVDVYECLHIFRQIVEIV 134 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~--------~~~~l~~~~~~~i~~QIl~aL 134 (720)
+..+|..+|.+++|||||++++ ++.... ...+|+||||.+++|.+++.. ....+++..++.|+.||+.||
T Consensus 64 ~~~~E~~~l~~l~hpniv~~~~-~~~~~~-~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al 141 (405)
T 3rgf_A 64 SACREIALLRELKHPNVISLQK-VFLSHA-DRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGI 141 (405)
T ss_dssp HHHHHHHHHHHCCCTTBCCCCE-EEEETT-TTEEEEEEECCSEEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCeeeEee-EEecCC-CCeEEEEEeCCCCCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHH
Confidence 3447888999999999999999 443322 236899999977899998831 122489999999999999999
Q ss_pred HHHHHCCceeccCCCCcEEE----ccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhccccccc
Q 004989 135 YAAHSQGIVVHNVRPSCFVM----SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDL 210 (720)
Q Consensus 135 ~yLHs~gIvHrDLKP~NILl----~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Df 210 (720)
.|||++||+||||||+|||+ +.++.+||+|||++...+..... .
T Consensus 142 ~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~~--------------------------------~ 189 (405)
T 3rgf_A 142 HYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKP--------------------------------L 189 (405)
T ss_dssp HHHHHTTCCCCCCCGGGEEECCSSTTTTCEEECCTTCCC-----------------------------------------
T ss_pred HHHHhCCEeCCCcCHHHeEEecCCCCCCcEEEEECCCceecCCCCcc--------------------------------c
Confidence 99999999999999999999 67789999999988543211000 0
Q ss_pred ccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC-CC
Q 004989 211 QLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VS 289 (720)
Q Consensus 211 gla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s 289 (720)
......+||++|+|||++.+.. ++
T Consensus 190 -------------------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~ 214 (405)
T 3rgf_A 190 -------------------------------------------------------ADLDPVVVTFWYRAPELLLGARHYT 214 (405)
T ss_dssp --------------------------------------------------------------CCCTTCCHHHHTTCCSCC
T ss_pred -------------------------------------------------------ccCCCceecCcccCchhhcCCCccc
Confidence 0001147899999999998854 89
Q ss_pred ccccchhhhchhhhccc---cCCCCchH--------HHHHHHhhc--CCCCcccc-------------------------
Q 004989 290 CASDIYRLGVLLFELFC---PFSTGEEK--------TRTMSSLRH--RVLPPQLL------------------------- 331 (720)
Q Consensus 290 ~~sDIwSLGvll~eLlt---pf~~~~~~--------~~~~~~l~~--~~~p~~~~------------------------- 331 (720)
.++|||||||++|||++ ||...... ...+..+.. +..+...+
T Consensus 215 ~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (405)
T 3rgf_A 215 KAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCS 294 (405)
T ss_dssp HHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCC
T ss_pred chhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcch
Confidence 99999999999999999 66543221 011111110 00110000
Q ss_pred ----------ccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004989 332 ----------LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 332 ----------~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
...+...+||.+||++||.+|||+.|+|+||||....
T Consensus 295 ~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~hp~f~~~~ 341 (405)
T 3rgf_A 295 LIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLEDP 341 (405)
T ss_dssp HHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTSSS
T ss_pred hhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhccCC
Confidence 0134456999999999999999999999999998763
No 85
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=3e-34 Score=311.46 Aligned_cols=220 Identities=15% Similarity=0.196 Sum_probs=164.5
Q ss_pred hchhhhhhcccCCCCCceecccceeecC-CCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENE-AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~-~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++||||+++++.+.... .....+|+||||.+++|.+++......+++..++.++.||+.||.|||++|
T Consensus 75 ~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ 154 (362)
T 3pg1_A 75 RVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAG 154 (362)
T ss_dssp HHHHHHHHHHHCCCTTBCCCSEEEEECCTTTCCEEEEEEECCSEEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCcCccceeeeEEeccCCCcceEEEEEccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCc
Confidence 4458888999999999999999444332 334468999999778999999776667999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||.+.......
T Consensus 155 ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~---------------------------------------------- 188 (362)
T 3pg1_A 155 VVHRDLHPGNILLADNNDITICDFNLAREDTADA---------------------------------------------- 188 (362)
T ss_dssp CCCCCCCGGGEEECTTCCEEECCTTC------------------------------------------------------
T ss_pred CEecCCChHHEEEcCCCCEEEEecCccccccccc----------------------------------------------
Confidence 9999999999999999999999998874211100
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC-CCCCccccchhhhch
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVL 300 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sDIwSLGvl 300 (720)
......||++|+|||++.+ ..++.++|||||||+
T Consensus 189 ---------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~i 223 (362)
T 3pg1_A 189 ---------------------------------------------NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCV 223 (362)
T ss_dssp ----------------------------------------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHH
T ss_pred ---------------------------------------------ccceecccceecCcHHhcCCCCCCcHhHHHhHHHH
Confidence 0011467999999999987 558999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcC-------------------------CCCc----c-ccccCchHHHHHHHcCCC
Q 004989 301 LFELFC---PFSTGEEKTRTMSSLRHR-------------------------VLPP----Q-LLLKFPKEASFCLWLLHP 347 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~-------------------------~~p~----~-~~~~~p~~~~Li~~~L~~ 347 (720)
+|+|++ ||............+... ..+. . .....+...+||.+||++
T Consensus 224 l~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~ 303 (362)
T 3pg1_A 224 MAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEF 303 (362)
T ss_dssp HHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCS
T ss_pred HHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcC
Confidence 999999 676654332222111100 0000 0 111234456999999999
Q ss_pred CCCCCCChHHHHcCcccCCCccchHH
Q 004989 348 EPSGRPKMGELLQSEFLNEPRDSMEE 373 (720)
Q Consensus 348 dP~~Rpta~eiL~hp~~~~~~~~l~e 373 (720)
||.+|||+.|+|+||||+....+...
T Consensus 304 dP~~Rpt~~ell~hp~f~~~~~~~~~ 329 (362)
T 3pg1_A 304 NPQRRISTEQALRHPYFESLFDPLDL 329 (362)
T ss_dssp SGGGSCCHHHHHTSGGGTTTCCGGGG
T ss_pred ChhhCCCHHHHHcCchhhhccCcccc
Confidence 99999999999999999988665444
No 86
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=1.9e-34 Score=301.37 Aligned_cols=204 Identities=17% Similarity=0.225 Sum_probs=162.1
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++.+++||||+++++ ++.+.. .++++||| .+++|.+++.... .+++..++.++.||+.||.|||++||
T Consensus 56 ~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~qi~~~l~~LH~~~i 130 (279)
T 3fdn_A 56 LRREVEIQSHLRHPNILRLYG-YFHDAT---RVYLILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYCHSKRV 130 (279)
T ss_dssp HHHHHHHHTTCCCTTBCCEEE-EEECSS---EEEEEECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHcCCCCCCcchhh-eEecCC---EEEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence 346788999999999999999 555543 57999999 8899999995543 49999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.++|+|||.+......
T Consensus 131 ~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~------------------------------------------------ 162 (279)
T 3fdn_A 131 IHRDIKPENLLLGSAGELKIADFGWSVHAPSS------------------------------------------------ 162 (279)
T ss_dssp EECCCCGGGEEECTTSCEEECSCCEESCC---------------------------------------------------
T ss_pred ecccCChHhEEEcCCCCEEEEeccccccCCcc------------------------------------------------
Confidence 99999999999999999999999877322110
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......||+.|+|||++.+..++.++|||||||++|
T Consensus 163 --------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ 198 (279)
T 3fdn_A 163 --------------------------------------------RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCY 198 (279)
T ss_dssp -------------------------------------------------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHH
T ss_pred --------------------------------------------cccccCCCCCccCHhHhccCCCCccchhHhHHHHHH
Confidence 001136799999999999988999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 303 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
+|++ ||...... .....+.....+ ++... +...+||.+||++||.+|||+.|+|+||||+..
T Consensus 199 ~l~~g~~p~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h~~~~~~ 264 (279)
T 3fdn_A 199 EFLVGKPPFEANTYQ-ETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITAN 264 (279)
T ss_dssp HHHHSSCTTCCSSHH-HHHHHHHHTCCC--CCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHCHHHHHH
T ss_pred HHHHCCCCCCCCcHH-HHHHHHHhCCCC--CCCcCCHHHHHHHHHHhccChhhCCCHHHHhhCccccCC
Confidence 9999 66654433 333333332211 12223 344599999999999999999999999999865
No 87
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=2.7e-34 Score=308.28 Aligned_cols=207 Identities=18% Similarity=0.246 Sum_probs=161.2
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++||||+++++ ++.... .+|+|||| .|++|.+++...+ .+++..++.++.||+.||.|||++|
T Consensus 67 ~~~~E~~~l~~l~hp~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~lH~~~ 141 (327)
T 3a62_A 67 HTKAERNILEEVKHPFIVDLIY-AFQTGG---KLYLILEYLSGGELFMQLEREG-IFMEDTACFYLAEISMALGHLHQKG 141 (327)
T ss_dssp ----HHHHHHHCCCTTBCCEEE-EEECSS---CEEEEEECCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCccceeE-EEEcCC---EEEEEEeCCCCCcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3446778999999999999999 555543 67999999 8899999995543 4899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||++....... .
T Consensus 142 ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---------------------------------~------------ 176 (327)
T 3a62_A 142 IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDG---------------------------------T------------ 176 (327)
T ss_dssp CCCCCCCTTTEEECTTSCEEECCCSCC-----------------------------------------------------
T ss_pred EEcccCCHHHeEECCCCcEEEEeCCcccccccCC---------------------------------c------------
Confidence 9999999999999999999999999874321100 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
.....+||+.|+|||++.+..++.++|||||||++
T Consensus 177 ---------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il 211 (327)
T 3a62_A 177 ---------------------------------------------VTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALM 211 (327)
T ss_dssp -----------------------------------------------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHH
T ss_pred ---------------------------------------------cccccCCCcCccCHhhCcCCCCCCcccchhHHHHH
Confidence 00114689999999999988899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~ 367 (720)
|||++ ||...... ..+..+....++ ++... +...+||.+||..||.+|| ++.|+++||||+..
T Consensus 212 ~el~~g~~pf~~~~~~-~~~~~i~~~~~~--~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp~f~~~ 283 (327)
T 3a62_A 212 YDMLTGAPPFTGENRK-KTIDKILKCKLN--LPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHI 283 (327)
T ss_dssp HHHHHSSCSCCCSSHH-HHHHHHHHTCCC--CCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHSGGGSSC
T ss_pred HHHHHCCCCCCCCCHH-HHHHHHHhCCCC--CCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcCCcccCC
Confidence 99999 67665444 333333332211 11223 4455999999999999999 88999999999876
No 88
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=5.7e-34 Score=309.05 Aligned_cols=203 Identities=16% Similarity=0.221 Sum_probs=153.1
Q ss_pred hhhhhhcccCC-----CCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHH
Q 004989 65 HSDGVELTHGD-----HLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 65 ~~e~~~L~~l~-----HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
.+|..+|..+. |||||++++ ++.... .+|+||||.+++|.+++.. ....+++.+++.++.||+.||.|||
T Consensus 79 ~~e~~~l~~l~~~~~~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH 154 (360)
T 3llt_A 79 KIEADILKKIQNDDINNNNIVKYHG-KFMYYD---HMCLIFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLR 154 (360)
T ss_dssp HHHHHHHHHTCCCSTTGGGBCCEEE-EEEETT---EEEEEECCCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcccCCCCCCeecccc-eeeECC---eeEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 35666777665 999999999 554443 6899999999999999944 3345999999999999999999999
Q ss_pred HCCceeccCCCCcEEEcc-------------------------CCceEEeecCcccCCCCCCcccccccccccccCCCCC
Q 004989 139 SQGIVVHNVRPSCFVMSS-------------------------FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSP 193 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~~-------------------------~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~ 193 (720)
++||+||||||+|||++. ++.+||+|||++......
T Consensus 155 ~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~------------------- 215 (360)
T 3llt_A 155 KMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY------------------- 215 (360)
T ss_dssp HTTEECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSC-------------------
T ss_pred HCCeeeCCCCcccEEEccccccccccchhcccccccccccccCCCCEEEEeccCceecCCC-------------------
Confidence 999999999999999975 556666666655211000
Q ss_pred CchhhhhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCcccccccc
Q 004989 194 LPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLME 273 (720)
Q Consensus 194 ~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~G 273 (720)
.....|
T Consensus 216 --------------------------------------------------------------------------~~~~~g 221 (360)
T 3llt_A 216 --------------------------------------------------------------------------HGSIIN 221 (360)
T ss_dssp --------------------------------------------------------------------------CCSCCS
T ss_pred --------------------------------------------------------------------------CcCccC
Confidence 011468
Q ss_pred CCcccCcccccCCCCCccccchhhhchhhhccc---cCCCCchHHHHHHHhhc--CCCCcccc-----------------
Q 004989 274 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRH--RVLPPQLL----------------- 331 (720)
Q Consensus 274 T~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~--~~~p~~~~----------------- 331 (720)
|+.|+|||++.+..++.++|||||||++|||++ ||........ ...+.. ..+|+...
T Consensus 222 t~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 300 (360)
T 3llt_A 222 TRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEH-LAMMESIIQPIPKNMLYEATKTNGSKYVNKDEL 300 (360)
T ss_dssp CGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTT
T ss_pred cccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCCcHHHH-HHHHHHhcCCCCHHHHhhhhhccCccccCcccc
Confidence 999999999999999999999999999999999 7766543322 211111 11111100
Q ss_pred --------------------------ccCchHHHHHHHcCCCCCCCCCChHHHHcCcccC
Q 004989 332 --------------------------LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLN 365 (720)
Q Consensus 332 --------------------------~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~ 365 (720)
...+...+||.+||++||.+|||+.|+|+||||+
T Consensus 301 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpta~elL~hp~f~ 360 (360)
T 3llt_A 301 KLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLKHKFLE 360 (360)
T ss_dssp EECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGC
T ss_pred eecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhcCChhhCCCHHHHhcCcccC
Confidence 0113344999999999999999999999999995
No 89
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=4.5e-34 Score=306.29 Aligned_cols=210 Identities=20% Similarity=0.267 Sum_probs=148.8
Q ss_pred hchhhhhhcccCC-CCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 63 RKHSDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~L~~l~-HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+..+|..+|..+. ||||+++++ ++.+.. .+|+|||| .|++|.+++... ..+++.+++.|+.||+.||.|||++
T Consensus 51 ~~~~e~~~l~~l~~h~niv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH~~ 125 (325)
T 3kn6_A 51 NTQKEITALKLCEGHPNIVKLHE-VFHDQL---HTFLVMELLNGGELFERIKKK-KHFSETEASYIMRKLVSAVSHMHDV 125 (325)
T ss_dssp HHHHHHHHHHHTTTCTTBCCEEE-EEECSS---EEEEEECCCCSCBHHHHHHHC-SCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHhcCCCCeeEEEE-EEEcCC---EEEEEEEccCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 3447777888887 999999999 555543 67999999 889999999654 3599999999999999999999999
Q ss_pred CceeccCCCCcEEEccCC---ceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCC
Q 004989 141 GIVVHNVRPSCFVMSSFN---HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~---~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~ 217 (720)
||+||||||+|||++.++ .+||+|||++........
T Consensus 126 ~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~----------------------------------------- 164 (325)
T 3kn6_A 126 GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQ----------------------------------------- 164 (325)
T ss_dssp TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC--------------------------------------------
T ss_pred CCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCC-----------------------------------------
Confidence 999999999999998766 799998888743211100
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhh
Q 004989 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRL 297 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSL 297 (720)
......||+.|+|||++.+..++.++|||||
T Consensus 165 -------------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~Diwsl 195 (325)
T 3kn6_A 165 -------------------------------------------------PLKTPCFTLHYAAPELLNQNGYDESCDLWSL 195 (325)
T ss_dssp --------------------------------------------------------------------CCCCHHHHHHHH
T ss_pred -------------------------------------------------cccccCCCcCccCHHHhcCCCCCCccchHHH
Confidence 0011467999999999999889999999999
Q ss_pred hchhhhccc---cCCCCc------hHHHHHHHhhcCCCC--ccccc-cCchHHHHHHHcCCCCCCCCCChHHHHcCcccC
Q 004989 298 GVLLFELFC---PFSTGE------EKTRTMSSLRHRVLP--PQLLL-KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLN 365 (720)
Q Consensus 298 Gvll~eLlt---pf~~~~------~~~~~~~~l~~~~~p--~~~~~-~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~ 365 (720)
||++|+|++ ||.... .....+..+..+.++ ..... ..+...+||.+||++||.+|||+.|+++||||+
T Consensus 196 G~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h~w~~ 275 (325)
T 3kn6_A 196 GVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQ 275 (325)
T ss_dssp HHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTCGGGC
T ss_pred HHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcChhhc
Confidence 999999999 665432 123445555544332 22222 334455999999999999999999999999998
Q ss_pred CC
Q 004989 366 EP 367 (720)
Q Consensus 366 ~~ 367 (720)
..
T Consensus 276 ~~ 277 (325)
T 3kn6_A 276 DG 277 (325)
T ss_dssp TT
T ss_pred cC
Confidence 75
No 90
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=1.4e-33 Score=319.79 Aligned_cols=207 Identities=15% Similarity=0.198 Sum_probs=163.1
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|..++|||||++++ ++.+.. .+|+|||| .|++|.+++.... .+++..++.++.||+.||.|||++|
T Consensus 82 ~~~~E~~~l~~l~hpniv~~~~-~~~~~~---~~~lv~e~~~~g~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~ 156 (494)
T 3lij_A 82 KLLEEVAVLKLLDHPNIMKLYD-FFEDKR---NYYLVMECYKGGELFDEIIHRM-KFNEVDAAVIIKQVLSGVTYLHKHN 156 (494)
T ss_dssp HHHHHHHHHTTCCCTTBCCEEE-EEECSS---EEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCCCeEEE-EEEeCC---EEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 4447888999999999999999 665543 57999999 8999999985443 4999999999999999999999999
Q ss_pred ceeccCCCCcEEEccC---CceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCC
Q 004989 142 IVVHNVRPSCFVMSSF---NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 142 IvHrDLKP~NILl~~~---~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
|+||||||+|||++.. +.+||+|||++.......
T Consensus 157 ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~------------------------------------------- 193 (494)
T 3lij_A 157 IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQK------------------------------------------- 193 (494)
T ss_dssp EECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTB-------------------------------------------
T ss_pred ceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCc-------------------------------------------
Confidence 9999999999999764 459999888873321110
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhh
Q 004989 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
.....+||++|+|||++.+ .|+.++||||||
T Consensus 194 ------------------------------------------------~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG 224 (494)
T 3lij_A 194 ------------------------------------------------KMKERLGTAYYIAPEVLRK-KYDEKCDVWSIG 224 (494)
T ss_dssp ------------------------------------------------CBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHH
T ss_pred ------------------------------------------------cccccCCCcCeeCHHHHcc-cCCCchhHHHHH
Confidence 0011478999999999875 599999999999
Q ss_pred chhhhccc---cCCCCchHHHHHHHhhcCCC--Ccccc-ccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 299 VLLFELFC---PFSTGEEKTRTMSSLRHRVL--PPQLL-LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~~--p~~~~-~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|++|+|++ ||...... .....+..... +.... ...+...+||.+||++||.+|||+.|+|+||||+..
T Consensus 225 ~il~~ll~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~hp~~~~~ 298 (494)
T 3lij_A 225 VILFILLAGYPPFGGQTDQ-EILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEM 298 (494)
T ss_dssp HHHHHHHHSSCSSCCSSHH-HHHHHHHHTCCCCCSGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHHH
T ss_pred HHHHHHHhCCCCCCCCCHH-HHHHHHHhCCCCCCchhcccCCHHHHHHHHHHCCCChhhCccHHHHhcCcccccC
Confidence 99999999 67665444 34444444332 22222 333455699999999999999999999999999764
No 91
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=3.9e-34 Score=312.43 Aligned_cols=213 Identities=20% Similarity=0.241 Sum_probs=158.8
Q ss_pred hchhhhhhcccCCCCCceecccceeecCC---CCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEA---AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~---~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
+..+|..++..++||||+++++ ++.... ....+|+||||.+++|.+++.. .+++..++.++.||+.||.|||+
T Consensus 70 ~~~~E~~~l~~l~hpniv~~~~-~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~---~~~~~~~~~i~~qi~~al~~lH~ 145 (371)
T 2xrw_A 70 RAYRELVLMKCVNHKNIIGLLN-VFTPQKSLEEFQDVYIVMELMDANLCQVIQM---ELDHERMSYLLYQMLCGIKHLHS 145 (371)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EECSCCSTTTCCEEEEEEECCSEEHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCccceEE-eeccccccccccceEEEEEcCCCCHHHHHhh---ccCHHHHHHHHHHHHHHHHHHHH
Confidence 4458888999999999999999 444332 2336899999977799999853 38999999999999999999999
Q ss_pred CCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCC
Q 004989 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||+||||||+|||++.++.+||+|||++...+...
T Consensus 146 ~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~-------------------------------------------- 181 (371)
T 2xrw_A 146 AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-------------------------------------------- 181 (371)
T ss_dssp TTCCCSCCCGGGEEECTTSCEEECCCCC----------------------------------------------------
T ss_pred CCeecccCCHHHEEEcCCCCEEEEEeeccccccccc--------------------------------------------
Confidence 999999999999999999999999998874321110
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhc
Q 004989 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
.....+||+.|+|||++.+..++.++|||||||
T Consensus 182 -----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~ 214 (371)
T 2xrw_A 182 -----------------------------------------------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 214 (371)
T ss_dssp -------------------------------------------------------CTTCCHHHHTTCCCCTTHHHHHHHH
T ss_pred -----------------------------------------------ccCCceecCCccCHHHhcCCCCCchHhHHHHHH
Confidence 001146899999999999988999999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcCCCC-cccc-------------------------------c--------cCch
Q 004989 300 LLFELFC---PFSTGEEKTRTMSSLRHRVLP-PQLL-------------------------------L--------KFPK 336 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~~~~p-~~~~-------------------------------~--------~~p~ 336 (720)
++|||++ ||............+.....| +.+. + ..+.
T Consensus 215 il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (371)
T 2xrw_A 215 IMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQ 294 (371)
T ss_dssp HHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHH
T ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHH
Confidence 9999999 777655443322222211111 0000 0 0123
Q ss_pred HHHHHHHcCCCCCCCCCChHHHHcCcccCCCccc
Q 004989 337 EASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 337 ~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
..+||.+||.+||.+|||+.|+|+||||+...++
T Consensus 295 ~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~~~~ 328 (371)
T 2xrw_A 295 ARDLLSKMLVIDASKRISVDEALQHPYINVWYDP 328 (371)
T ss_dssp HHHHHHHHSCSSGGGSCCHHHHHHSHHHHTTCCH
T ss_pred HHHHHHHHCcCChhhCCCHHHHhCCcchhhhcCc
Confidence 4599999999999999999999999999876554
No 92
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=1.3e-33 Score=294.57 Aligned_cols=207 Identities=18% Similarity=0.272 Sum_probs=163.7
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++||||+++++ ++.+.. .+|+|||| .|++|.+++.... .+++.+++.++.||+.||.|||++|
T Consensus 52 ~~~~E~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~~i~~~l~~lH~~~ 126 (277)
T 3f3z_A 52 RFKQEIEIMKSLDHPNIIRLYE-TFEDNT---DIYLVMELCTGGELFERVVHKR-VFRESDAARIMKDVLSAVAYCHKLN 126 (277)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEE-EEECSS---EEEEEEECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCEeeEEE-EEecCC---eEEEEEeccCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3447788999999999999999 555443 57999999 7899999995443 4999999999999999999999999
Q ss_pred ceeccCCCCcEEE---ccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCC
Q 004989 142 IVVHNVRPSCFVM---SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 142 IvHrDLKP~NILl---~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
|+||||||+||++ +.++.++|+|||.+.......
T Consensus 127 i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~------------------------------------------- 163 (277)
T 3f3z_A 127 VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK------------------------------------------- 163 (277)
T ss_dssp EECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTS-------------------------------------------
T ss_pred ccCCCCCHHHEEEecCCCCCcEEEEecccceeccCcc-------------------------------------------
Confidence 9999999999999 788899999998874321110
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhh
Q 004989 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
......||+.|+|||++.+. ++.++||||||
T Consensus 164 ------------------------------------------------~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG 194 (277)
T 3f3z_A 164 ------------------------------------------------MMRTKVGTPYYVSPQVLEGL-YGPECDEWSAG 194 (277)
T ss_dssp ------------------------------------------------CBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHH
T ss_pred ------------------------------------------------chhccCCCCCccChHHhccc-CCchhhehhHH
Confidence 00113689999999999765 89999999999
Q ss_pred chhhhccc---cCCCCchHHHHHHHhhcCCC--Ccccc-ccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 299 VLLFELFC---PFSTGEEKTRTMSSLRHRVL--PPQLL-LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~~--p~~~~-~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|++|+|++ ||...... .....+..... +.... ...+...+||.+||++||.+|||+.++|+||||+..
T Consensus 195 ~~l~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~ 268 (277)
T 3f3z_A 195 VMMYVLLCGYPPFSAPTDS-EVMLKIREGTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEHEWFEKQ 268 (277)
T ss_dssp HHHHHHHHSSCSSCCSSHH-HHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHHH
T ss_pred HHHHHHHHCCCCCCCCCHH-HHHHHHHhCCCCCCchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhcc
Confidence 99999999 67665544 33333433322 22222 233455699999999999999999999999999764
No 93
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=2.5e-34 Score=313.95 Aligned_cols=214 Identities=17% Similarity=0.258 Sum_probs=163.4
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCC---CCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAA---IDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~---~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
+..+|..++..++||||+++++ ++..... ...+|+||||.+++|.+++.. .+++..++.++.||+.||.|||+
T Consensus 87 ~~~~E~~~l~~l~h~niv~~~~-~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~---~~~~~~~~~i~~qi~~aL~~LH~ 162 (371)
T 4exu_A 87 RAYRELLLLKHMQHENVIGLLD-VFTPASSLRNFYDFYLVMPFMQTDLQKIMGM---EFSEEKIQYLVYQMLKGLKYIHS 162 (371)
T ss_dssp HHHHHHHHHHHCCCTTBCCCSE-EECSCSSSTTCCCCEEEEECCCEEHHHHTTS---CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCchhhhh-heeccCCcccceeEEEEEccccccHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHH
Confidence 4458888999999999999999 5544332 223599999977899998832 39999999999999999999999
Q ss_pred CCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCC
Q 004989 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||+||||||+|||++.++.+||+|||.+...+..
T Consensus 163 ~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~--------------------------------------------- 197 (371)
T 4exu_A 163 AGVVHRDLKPGNLAVNEDCELKILDFGLARHADAE--------------------------------------------- 197 (371)
T ss_dssp TTCCCSCCCGGGEEECTTCCEEECSTTCC---------------------------------------------------
T ss_pred CCCcCCCcCHHHeEECCCCCEEEEecCcccccccC---------------------------------------------
Confidence 99999999999999999999999999887432110
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC-CCCCccccchhhh
Q 004989 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLG 298 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sDIwSLG 298 (720)
.....||++|+|||++.+ ..++.++||||||
T Consensus 198 ------------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG 229 (371)
T 4exu_A 198 ------------------------------------------------MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVG 229 (371)
T ss_dssp --------------------------------------------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHH
T ss_pred ------------------------------------------------cCCcccCccccCHHHhcCCCCCCcHHhHHHHH
Confidence 011467999999999987 5689999999999
Q ss_pred chhhhccc---cCCCCchHHHHHHHhhcCCCC-cc----------------------------ccccCchHHHHHHHcCC
Q 004989 299 VLLFELFC---PFSTGEEKTRTMSSLRHRVLP-PQ----------------------------LLLKFPKEASFCLWLLH 346 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~~p-~~----------------------------~~~~~p~~~~Li~~~L~ 346 (720)
|++|+|++ ||............+.....+ .. +....+...+||.+||+
T Consensus 230 ~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~ 309 (371)
T 4exu_A 230 CIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLE 309 (371)
T ss_dssp HHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSC
T ss_pred HHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCC
Confidence 99999999 676654433222222111111 00 11223455699999999
Q ss_pred CCCCCCCChHHHHcCcccCCCccchHH
Q 004989 347 PEPSGRPKMGELLQSEFLNEPRDSMEE 373 (720)
Q Consensus 347 ~dP~~Rpta~eiL~hp~~~~~~~~l~e 373 (720)
+||.+|||+.|+|+||||+....+..+
T Consensus 310 ~dP~~Rpt~~ell~hp~f~~~~~~~~~ 336 (371)
T 4exu_A 310 LDVDKRLTAAQALTHPFFEPFRDPEEE 336 (371)
T ss_dssp SCTTTSCCHHHHHTSGGGTTTCCGGGC
T ss_pred CChhhcCCHHHHhcCcccccCCCcccc
Confidence 999999999999999999987554433
No 94
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=3.1e-34 Score=300.77 Aligned_cols=207 Identities=19% Similarity=0.217 Sum_probs=154.8
Q ss_pred hhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHHHC-C
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHSQ-G 141 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~---~~~~l~~~~~~~i~~QIl~aL~yLHs~-g 141 (720)
.+...+..++||||+++++ ++.++. .+|+||||.+++|.+++.. ....+++..++.++.||+.||.|||++ |
T Consensus 55 ~~~~~~~~~~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~ 130 (290)
T 3fme_A 55 DLDISMRTVDCPFTVTFYG-ALFREG---DVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS 130 (290)
T ss_dssp HHHHHHTTCCCTTBCCEEE-EEECSS---SEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHhCCCCeEEEEee-eeeccC---CEEEEEehhccchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCC
Confidence 4444578899999999999 554443 5799999966799888732 455699999999999999999999998 9
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.+||+|||.+.......
T Consensus 131 i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~---------------------------------------------- 164 (290)
T 3fme_A 131 VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDV---------------------------------------------- 164 (290)
T ss_dssp CCCCCCSGGGCEECTTCCEEBCCC--------------------------------------------------------
T ss_pred eecCCCCHHHEEECCCCCEEEeecCCcccccccc----------------------------------------------
Confidence 9999999999999999999999998874321110
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccc----cCCCCCccccchhh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEEL----AGAPVSCASDIYRL 297 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l----~~~~~s~~sDIwSL 297 (720)
......||+.|+|||++ .+..++.++|||||
T Consensus 165 ---------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~sl 199 (290)
T 3fme_A 165 ---------------------------------------------AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSL 199 (290)
T ss_dssp --------------------------------------------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHH
T ss_pred ---------------------------------------------cccccCCCccccChhhcChhhcCcCCCcHHHHHHH
Confidence 00013579999999996 45558999999999
Q ss_pred hchhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 298 GVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 298 Gvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
||++|+|++ ||..................+......++ ...+|+.+||++||.+|||+.|+++||||+..
T Consensus 200 G~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~hp~f~~~ 273 (290)
T 3fme_A 200 GITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLH 273 (290)
T ss_dssp HHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred HHHHHHHHHCCCCccccCchHHHHHHHhccCCCCcccccCCHHHHHHHHHHhhcChhhCcCHHHHHhCcccccC
Confidence 999999999 77654443333333333333333333334 45599999999999999999999999999864
No 95
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=5e-34 Score=316.87 Aligned_cols=208 Identities=21% Similarity=0.246 Sum_probs=157.8
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++|||||++++ ++..+ .+|+|||| .+++|.+++... ..+++.+++.++.||+.||.|||++|
T Consensus 186 ~~~~E~~~l~~l~hpniv~l~~-~~~~~----~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~ 259 (419)
T 3i6u_A 186 NVETEIEILKKLNHPCIIKIKN-FFDAE----DYYIVLELMEGGELFDKVVGN-KRLKEATCKLYFYQMLLAVQYLHENG 259 (419)
T ss_dssp CHHHHHHHHHHCCCTTBCCCCE-EEESS----EEEEEEECCTTCBGGGGTSSS-CCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCEeeEEE-EEecC----ceEEEEEcCCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3457888999999999999999 55443 47999999 899999998544 45999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCC---ceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCC
Q 004989 142 IVVHNVRPSCFVMSSFN---HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~---~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
|+||||||+|||++..+ .+||+|||++...+...
T Consensus 260 ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~~~~~~~------------------------------------------- 296 (419)
T 3i6u_A 260 IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS------------------------------------------- 296 (419)
T ss_dssp CCCSCCCGGGEEESSSSSSCCEEECCSSTTTSCC----------------------------------------------
T ss_pred ccccCCChHhEEEecCCCcceEEEeecccceecCCCc-------------------------------------------
Confidence 99999999999997544 49999888874432110
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC---CCCCccccch
Q 004989 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG---APVSCASDIY 295 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~---~~~s~~sDIw 295 (720)
.....+||+.|+|||++.+ ..++.++|||
T Consensus 297 ------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Diw 328 (419)
T 3i6u_A 297 ------------------------------------------------LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCW 328 (419)
T ss_dssp --------------------------------------------------------CTTCCTTTTC----CTTHHHHHHH
T ss_pred ------------------------------------------------cccccCCCCCccCceeeecCCCCCCCchhhhH
Confidence 0011468999999999864 4588999999
Q ss_pred hhhchhhhccc---cCCCCchHHHHHHHhhcCC--CCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 296 RLGVLLFELFC---PFSTGEEKTRTMSSLRHRV--LPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 296 SLGvll~eLlt---pf~~~~~~~~~~~~l~~~~--~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
||||++|+|++ ||............+.... +++...... +...+||.+||++||.+|||+.|+|+||||+..
T Consensus 329 slG~il~~lltg~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~~ 406 (419)
T 3i6u_A 329 SLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDE 406 (419)
T ss_dssp HHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCCH
T ss_pred hHHHHHHHHHHCCCCCCCCcchHHHHHHHhcCCCCCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhCCcccCCh
Confidence 99999999999 6655433222333333332 223333333 445599999999999999999999999999874
No 96
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=1.5e-33 Score=297.05 Aligned_cols=214 Identities=18% Similarity=0.238 Sum_probs=164.6
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++.+++||||+++++ ++..+. .+|++|||.+++|.+++... ...+++..++.++.||+.||.|||++|
T Consensus 48 ~~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ 123 (299)
T 2r3i_A 48 TAIREISLLKELNHPNIVKLLD-VIHTEN---KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123 (299)
T ss_dssp HHHHHHHHHTTCCCTTBCCEEE-EEEETT---EEEEEEECCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCCCeeeEEE-EEecCC---ceEEEEEcccCCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3447888999999999999999 555443 57999999667999999443 345899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.++|+|||.+...+....
T Consensus 124 i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~--------------------------------------------- 158 (299)
T 2r3i_A 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--------------------------------------------- 158 (299)
T ss_dssp CCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCSB---------------------------------------------
T ss_pred ccCCCCCHHHeEEcCCCCEEECcchhhhhccCCcc---------------------------------------------
Confidence 99999999999999999999999988733211100
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC-CCccccchhhhch
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVL 300 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGvl 300 (720)
......||+.|+|||++.+.. ++.++|||||||+
T Consensus 159 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~ 193 (299)
T 2r3i_A 159 ---------------------------------------------TYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCI 193 (299)
T ss_dssp ---------------------------------------------CTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHH
T ss_pred ---------------------------------------------ccCcccccccccCcHHhhccccCChHHHHHHHHHH
Confidence 001136799999999998876 7999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCc---------------cc-----------cc-cCchHHHHHHHcCCCCCC
Q 004989 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPP---------------QL-----------LL-KFPKEASFCLWLLHPEPS 350 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~---------------~~-----------~~-~~p~~~~Li~~~L~~dP~ 350 (720)
+|+|++ ||............+.....++ .+ .. ..+...+||.+||++||+
T Consensus 194 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~ 273 (299)
T 2r3i_A 194 FAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPN 273 (299)
T ss_dssp HHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTT
T ss_pred HHHHHhCCCCCCCccHHHHHHHHHHHhCCCchhhhhHhhcCcccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcc
Confidence 999999 6766554433333222100000 00 01 123445999999999999
Q ss_pred CCCChHHHHcCcccCCCccc
Q 004989 351 GRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 351 ~Rpta~eiL~hp~~~~~~~~ 370 (720)
+|||+.++|+||||+....+
T Consensus 274 ~Rpt~~~~l~hp~~~~~~~~ 293 (299)
T 2r3i_A 274 KRISAKAALAHPFFQDVTKP 293 (299)
T ss_dssp TSCCHHHHHTSGGGTTCCCC
T ss_pred cCCCHHHHhcChhhhcCCCC
Confidence 99999999999999987543
No 97
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1e-33 Score=305.90 Aligned_cols=212 Identities=13% Similarity=0.158 Sum_probs=163.2
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
+..+|..++.+++||||+++++ ++.... .+++||||.+++|.+++......+++.+++.++.||+.||.|||++||
T Consensus 58 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i 133 (346)
T 1ua2_A 58 TALREIKLLQELSHPNIIGLLD-AFGHKS---NISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWI 133 (346)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EECCTT---CCEEEEECCSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhhCCCCCCCeEEE-EEeeCC---ceEEEEEcCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence 3347888999999999999999 554443 569999996679999997666679999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.+||+|||++...+....
T Consensus 134 vH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~---------------------------------------------- 167 (346)
T 1ua2_A 134 LHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNR---------------------------------------------- 167 (346)
T ss_dssp CCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCC----------------------------------------------
T ss_pred ECCCCCHHHEEEcCCCCEEEEecccceeccCCcc----------------------------------------------
Confidence 9999999999999999999999998854321100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC-CCccccchhhhchh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLL 301 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGvll 301 (720)
......||++|+|||++.+.. ++.++|||||||++
T Consensus 168 --------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il 203 (346)
T 1ua2_A 168 --------------------------------------------AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCIL 203 (346)
T ss_dssp --------------------------------------------CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHH
T ss_pred --------------------------------------------cCCcccccccccCchHhhCCCCCCchhhhHhHHHHH
Confidence 001146899999999997654 89999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhc-CCCCcc------------------------cccc-CchHHHHHHHcCCCCCCCC
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRH-RVLPPQ------------------------LLLK-FPKEASFCLWLLHPEPSGR 352 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~-~~~p~~------------------------~~~~-~p~~~~Li~~~L~~dP~~R 352 (720)
|||++ ||............+.. +..++. .... .+...+||.+||+.||.+|
T Consensus 204 ~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 283 (346)
T 1ua2_A 204 AELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCAR 283 (346)
T ss_dssp HHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTS
T ss_pred HHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhC
Confidence 99999 45444433222222211 111000 0012 2345599999999999999
Q ss_pred CChHHHHcCcccCCCc
Q 004989 353 PKMGELLQSEFLNEPR 368 (720)
Q Consensus 353 pta~eiL~hp~~~~~~ 368 (720)
||+.|+|+||||....
T Consensus 284 pt~~ell~h~~f~~~~ 299 (346)
T 1ua2_A 284 ITATQALKMKYFSNRP 299 (346)
T ss_dssp CCHHHHHTSGGGTSSS
T ss_pred CCHHHHhcChhhhcCC
Confidence 9999999999998753
No 98
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=8.1e-34 Score=295.40 Aligned_cols=214 Identities=13% Similarity=0.149 Sum_probs=164.9
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++..++||||+++++ ++.... .+|+|||| .+++|.+++... ..+++.+++.++.||+.||.|||++|
T Consensus 51 ~~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~ 125 (276)
T 2yex_A 51 NIKKEICINKMLNHENVVKFYG-HRREGN---IQYLFLEYCSGGELFDRIEPD-IGMPEPDAQRFFHQLMAGVVYLHGIG 125 (276)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEE-EEEETT---EEEEEEECCTTEEGGGGSBTT-TBCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhcCCCCceeeee-EEEcCC---EEEEEEEecCCCcHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3346777899999999999999 554443 57999999 788999998543 45999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.++|+|||.+.........
T Consensus 126 i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~-------------------------------------------- 161 (276)
T 2yex_A 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE-------------------------------------------- 161 (276)
T ss_dssp EECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE--------------------------------------------
T ss_pred eeccCCChHHEEEccCCCEEEeeCCCccccCCCcch--------------------------------------------
Confidence 999999999999999999999999887432110000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCC-Cccccchhhhch
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYRLGVL 300 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~-s~~sDIwSLGvl 300 (720)
. ......||+.|+|||++.+..+ +.++|||||||+
T Consensus 162 ------------------------~--------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~i 197 (276)
T 2yex_A 162 ------------------------R--------------------LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIV 197 (276)
T ss_dssp ------------------------C--------------------CBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHH
T ss_pred ------------------------h--------------------cccCCccccCccChHHHhcCCCCCCcchHHHHHHH
Confidence 0 0011468999999999988774 789999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCC-CCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004989 301 LFELFC---PFSTGEEKTRTMSSLRHRV-LPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~-~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
+|||++ ||............+.... ..+......+...+||.+||+.||.+|||+.|+++||||+....
T Consensus 198 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~ 270 (276)
T 2yex_A 198 LTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPLK 270 (276)
T ss_dssp HHHHHHSSCCCSCSCTTSHHHHHHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCCCC
T ss_pred HHHHHhCCCCCCCCchHHHHHHHhhhcccccCchhhcCHHHHHHHHHHCCCCchhCCCHHHHhcCccccChhh
Confidence 999999 6765443322333333222 22222233345569999999999999999999999999998744
No 99
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=3e-33 Score=317.87 Aligned_cols=209 Identities=18% Similarity=0.237 Sum_probs=165.9
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++|||||++++ ++++.. .+|+|||| .|++|.+++.... .+++..++.++.||+.||.|||++|
T Consensus 92 ~~~~E~~~l~~l~hpniv~~~~-~~~~~~---~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~ 166 (504)
T 3q5i_A 92 EIYNEISLLKSLDHPNIIKLFD-VFEDKK---YFYLVTEFYEGGELFEQIINRH-KFDECDAANIMKQILSGICYLHKHN 166 (504)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEE-EEECSS---EEEEEEECCTTCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCCCeEEE-EEEcCC---EEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3447888999999999999999 665543 68999999 8999999995443 4999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCC---ceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCC
Q 004989 142 IVVHNVRPSCFVMSSFN---HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~---~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
|+||||||+|||++.++ .+||+|||++.......
T Consensus 167 ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~------------------------------------------- 203 (504)
T 3q5i_A 167 IVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDY------------------------------------------- 203 (504)
T ss_dssp EECSCCSGGGEEESSTTCCSSEEECCCTTCEECCTTS-------------------------------------------
T ss_pred eEeCCCcHHHEEEecCCCCccEEEEECCCCEEcCCCC-------------------------------------------
Confidence 99999999999998776 69999888874321110
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhh
Q 004989 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
.....+||+.|+|||++.+ .++.++||||||
T Consensus 204 ------------------------------------------------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG 234 (504)
T 3q5i_A 204 ------------------------------------------------KLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCG 234 (504)
T ss_dssp ------------------------------------------------CBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHH
T ss_pred ------------------------------------------------ccccccCCcCCCCHHHhcc-CCCchHHHHHHH
Confidence 0011468999999999875 499999999999
Q ss_pred chhhhccc---cCCCCchHHHHHHHhhcCCCC--cccccc-CchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004989 299 VLLFELFC---PFSTGEEKTRTMSSLRHRVLP--PQLLLK-FPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~~p--~~~~~~-~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
|++|+|++ ||...... .....+..+.+. ...+.. .+...+||.+||++||.+|||+.|+|+||||+....
T Consensus 235 ~il~~ll~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~~ 310 (504)
T 3q5i_A 235 VIMYILLCGYPPFGGQNDQ-DIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYAN 310 (504)
T ss_dssp HHHHHHHHSSCSSCCSSHH-HHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHTCC
T ss_pred HHHHHHHhCCCCCCCCCHH-HHHHHHHcCCCCCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcCHhhhhchh
Confidence 99999999 67665444 444455444332 222233 344559999999999999999999999999987644
No 100
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=6.8e-34 Score=313.87 Aligned_cols=211 Identities=17% Similarity=0.215 Sum_probs=154.9
Q ss_pred hhhhhc-ccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 66 SDGVEL-THGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 66 ~e~~~L-~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
+|..++ ...+||||+++++.+.........+|+|||| .|++|.++|... ...+++.+++.|+.||+.||.|||++||
T Consensus 103 ~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i 182 (400)
T 1nxk_A 103 REVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 182 (400)
T ss_dssp HHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 444454 4468999999999433222223368999999 889999999654 3459999999999999999999999999
Q ss_pred eeccCCCCcEEEcc---CCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCC
Q 004989 143 VVHNVRPSCFVMSS---FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 143 vHrDLKP~NILl~~---~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||||||+|||++. ++.+||+|||+++......
T Consensus 183 vHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~-------------------------------------------- 218 (400)
T 1nxk_A 183 AHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN-------------------------------------------- 218 (400)
T ss_dssp ECCCCCGGGEEESSSSTTCCEEECCCTTCEECC-----------------------------------------------
T ss_pred cccCcCcceEEEecCCCCccEEEEecccccccCCCC--------------------------------------------
Confidence 99999999999997 7889999988874321100
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhc
Q 004989 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
.....+||+.|+|||++.+..|+.++|||||||
T Consensus 219 -----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~ 251 (400)
T 1nxk_A 219 -----------------------------------------------SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGV 251 (400)
T ss_dssp -------------------------------------------------------CTTCCGGGSCCCCSSSHHHHHHHHH
T ss_pred -----------------------------------------------ccccCCCCCCccCHhhcCCCCCCCcccHHHHHH
Confidence 001147899999999999888999999999999
Q ss_pred hhhhccc---cCCCCchHH---HHHHHhhcC--CCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 300 LLFELFC---PFSTGEEKT---RTMSSLRHR--VLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~---~~~~~l~~~--~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
++|||++ ||....... .....+..+ .++......+ +...+||.+||+.||.+|||+.|+|+||||...
T Consensus 252 il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~~ 328 (400)
T 1nxk_A 252 IMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 328 (400)
T ss_dssp HHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHTT
T ss_pred HHHHHHhCCCCCCCCccccccHHHHHHHHcCcccCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCccccCC
Confidence 9999999 665432210 112222222 2232222333 445599999999999999999999999999865
No 101
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=3.8e-34 Score=327.56 Aligned_cols=206 Identities=15% Similarity=0.223 Sum_probs=164.8
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~-~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
.+|..+|.+++|||||++++ ++++.. .+|+|||| .|++|.+++...+ ..+++..++.|+.||+.||.|||++||
T Consensus 232 ~~E~~iL~~l~hp~Iv~l~~-~~~~~~---~l~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gI 307 (576)
T 2acx_A 232 LNEKQILEKVNSRFVVSLAY-AYETKD---ALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERI 307 (576)
T ss_dssp HHHHHHHHHCCCTTBCCEEE-EEECSS---EEEEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHcCCCCEeeEEE-EEeeCC---EEEEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence 36778999999999999999 555543 68999999 8999999995533 349999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
|||||||+|||++.+|++||+|||++.......
T Consensus 308 vHrDLKPeNILld~~g~vKL~DFGla~~~~~~~----------------------------------------------- 340 (576)
T 2acx_A 308 VYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ----------------------------------------------- 340 (576)
T ss_dssp ECCCCCGGGEEECTTSCEEECCCTTCEECCTTC-----------------------------------------------
T ss_pred eccCCchheEEEeCCCCeEEEecccceecccCc-----------------------------------------------
Confidence 999999999999999999999998874321100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
.....+||+.|+|||++.+..|+.++|||||||++|
T Consensus 341 --------------------------------------------~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvily 376 (576)
T 2acx_A 341 --------------------------------------------TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLY 376 (576)
T ss_dssp --------------------------------------------CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHH
T ss_pred --------------------------------------------cccccCCCccccCHHHHcCCCCCccchHHHHHHHHH
Confidence 001147899999999999988999999999999999
Q ss_pred hccc---cCCCCc---hHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC
Q 004989 303 ELFC---PFSTGE---EKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 367 (720)
Q Consensus 303 eLlt---pf~~~~---~~~~~~~~l~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~ 367 (720)
||++ ||.... ........+... +..++..+ +...+||.+||++||.+|| ++.|+++||||+..
T Consensus 377 eLltG~~PF~~~~~~~~~~~i~~~i~~~--~~~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~HpfF~~i 451 (576)
T 2acx_A 377 EMIAGQSPFQQRKKKIKREEVERLVKEV--PEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKL 451 (576)
T ss_dssp HHHHSSCSSSCSSSCCCHHHHHHHHHHC--CCCCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTSGGGTTC
T ss_pred HHHhCCCCCcccccchhHHHHHHHhhcc--cccCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhChhhccC
Confidence 9999 676542 122333333322 22222333 4455999999999999999 78999999999986
No 102
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=8.8e-34 Score=304.02 Aligned_cols=210 Identities=19% Similarity=0.285 Sum_probs=162.9
Q ss_pred hhchhhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHH
Q 004989 62 LRKHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 62 ~r~~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
.+..+|..++..+ .||||+++++ ++.... .+|+|||| .|++|.+++.. ....+++.+++.++.||+.||.|||
T Consensus 73 ~~~~~e~~~l~~l~~~~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH 148 (327)
T 3lm5_A 73 AEILHEIAVLELAKSCPRVINLHE-VYENTS---EIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLH 148 (327)
T ss_dssp HHHHHHHHHHHHTTTCTTBCCEEE-EEECSS---EEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCCEEEEEE-EEEeCC---eEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH
Confidence 3444777788877 5699999999 555443 57999999 88999999843 3456999999999999999999999
Q ss_pred HCCceeccCCCCcEEEcc---CCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccC
Q 004989 139 SQGIVVHNVRPSCFVMSS---FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 215 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~~---~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~ 215 (720)
++||+||||||+|||++. ++.+||+|||++...+...
T Consensus 149 ~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~---------------------------------------- 188 (327)
T 3lm5_A 149 QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHAC---------------------------------------- 188 (327)
T ss_dssp HTTEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC--------------------------------------------
T ss_pred HCCeecCcCChHHEEEecCCCCCcEEEeeCccccccCCcc----------------------------------------
Confidence 999999999999999987 7899999988874321110
Q ss_pred CCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccch
Q 004989 216 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIY 295 (720)
Q Consensus 216 ~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIw 295 (720)
......||+.|+|||++.+..++.++|||
T Consensus 189 ---------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Diw 217 (327)
T 3lm5_A 189 ---------------------------------------------------ELREIMGTPEYLAPEILNYDPITTATDMW 217 (327)
T ss_dssp --------------------------------------------------------CCCGGGCCHHHHTTCCCCTHHHHH
T ss_pred ---------------------------------------------------ccccccCCcCccCCeeecCCCCCchhhHH
Confidence 00114689999999999999999999999
Q ss_pred hhhchhhhccc---cCCCCchHHHHHHHhhc--CCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 296 RLGVLLFELFC---PFSTGEEKTRTMSSLRH--RVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 296 SLGvll~eLlt---pf~~~~~~~~~~~~l~~--~~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
||||++|+|++ ||........ ...+.. ...++.....++ ...+||.+||++||.+|||++++|+||||+..
T Consensus 218 slG~il~~ll~g~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h~~~~~~ 294 (327)
T 3lm5_A 218 NIGIIAYMLLTHTSPFVGEDNQET-YLNISQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQW 294 (327)
T ss_dssp HHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTCGGGCCC
T ss_pred HHHHHHHHHHhCCCCCCCCCchHH-HHHHHhcccccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCCHhhccc
Confidence 99999999999 7766554432 222222 222333333344 44599999999999999999999999999876
No 103
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=5.2e-34 Score=334.72 Aligned_cols=205 Identities=16% Similarity=0.226 Sum_probs=164.7
Q ss_pred hhhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 65 HSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
.+|..+|..+ +||||+++++ ++++.. .+|+|||| .|++|.++|.+.+ .+++..++.|+.||+.||.|||++||
T Consensus 389 ~~E~~~l~~~~~~~~i~~l~~-~~~~~~---~~~lV~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~gI 463 (674)
T 3pfq_A 389 MVEKRVLALPGKPPFLTQLHS-CFQTMD---RLYFVMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFLQSKGI 463 (674)
T ss_dssp HHHHHHHTCTTCCTTBCCEEE-ECBCSS---EEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTSE
T ss_pred HHHHHHHHhccCCCeEEEEEE-EEEeCC---EEEEEEeCcCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 3566677775 7999999999 555543 68999999 8999999996544 49999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
|||||||+||||+.++++||+|||+++......
T Consensus 464 iHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~----------------------------------------------- 496 (674)
T 3pfq_A 464 IYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG----------------------------------------------- 496 (674)
T ss_dssp ECCCCCSTTEEECSSSCEEECCCTTCEECCCTT-----------------------------------------------
T ss_pred EeccCChhhEEEcCCCcEEEeecceeeccccCC-----------------------------------------------
Confidence 999999999999999999999999874311100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......+||+.|+|||++.+..|+.++|||||||+||
T Consensus 497 -------------------------------------------~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvily 533 (674)
T 3pfq_A 497 -------------------------------------------VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLY 533 (674)
T ss_dssp -------------------------------------------CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHH
T ss_pred -------------------------------------------cccccccCCCcccCHhhhcCCCCCccceEechHHHHH
Confidence 0001257999999999999999999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCCCcccccc-CchHHHHHHHcCCCCCCCCCCh-----HHHHcCcccCCC
Q 004989 303 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLK-FPKEASFCLWLLHPEPSGRPKM-----GELLQSEFLNEP 367 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~-~p~~~~Li~~~L~~dP~~Rpta-----~eiL~hp~~~~~ 367 (720)
||++ ||...... ..+..+....+. ++.. .+...+||.+||++||.+||++ +||++||||+..
T Consensus 534 elltG~~Pf~~~~~~-~~~~~i~~~~~~--~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h~ff~~i 604 (674)
T 3pfq_A 534 EMLAGQAPFEGEDED-ELFQSIMEHNVA--YPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYI 604 (674)
T ss_dssp HHHHSSCSSCCSSHH-HHHHHHHSSCCC--CCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSSGGGSSC
T ss_pred HHHcCCCCCCCCCHH-HHHHHHHhCCCC--CCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcCccccCC
Confidence 9999 77765554 444444433221 1223 3445599999999999999997 999999999986
No 104
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=1.4e-33 Score=310.70 Aligned_cols=214 Identities=17% Similarity=0.179 Sum_probs=161.6
Q ss_pred hhhhhhcccCCCCCceecccceeecCC--CCCcEEEEEecCCCCHHHHHh---CCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEA--AIDPFVHAIEWGDVSLRQWLD---KPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~--~~~~~~lv~E~~ggsL~~~L~---~~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
.+|..+|..++|||||++++.++.... ....+++||||.+++|.+.+. .....+++..++.|+.||+.||.|||+
T Consensus 80 ~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~ 159 (394)
T 4e7w_A 80 NRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHS 159 (394)
T ss_dssp CHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 368889999999999999995544332 233478999996667666552 234559999999999999999999999
Q ss_pred CCceeccCCCCcEEEc-cCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCC
Q 004989 140 QGIVVHNVRPSCFVMS-SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~-~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
+||+||||||+|||++ .++.+||+|||+++......
T Consensus 160 ~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~~------------------------------------------- 196 (394)
T 4e7w_A 160 IGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGE------------------------------------------- 196 (394)
T ss_dssp TTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTTC-------------------------------------------
T ss_pred CCccCCCCCHHHEEEcCCCCcEEEeeCCCcccccCCC-------------------------------------------
Confidence 9999999999999999 78999999998874321110
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC-CCccccchhh
Q 004989 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRL 297 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSL 297 (720)
......||++|+|||++.+.. ++.++|||||
T Consensus 197 ------------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSl 228 (394)
T 4e7w_A 197 ------------------------------------------------PNVSYICSRYYRAPELIFGATNYTTNIDIWST 228 (394)
T ss_dssp ------------------------------------------------CCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHH
T ss_pred ------------------------------------------------CCcccccCcCccCHHHHcCCCCCCcHHHHHHH
Confidence 001146899999999997764 8999999999
Q ss_pred hchhhhccc---cCCCCchHHHHHHHhhc------------------CCCCc--------cccc-cCchHHHHHHHcCCC
Q 004989 298 GVLLFELFC---PFSTGEEKTRTMSSLRH------------------RVLPP--------QLLL-KFPKEASFCLWLLHP 347 (720)
Q Consensus 298 Gvll~eLlt---pf~~~~~~~~~~~~l~~------------------~~~p~--------~~~~-~~p~~~~Li~~~L~~ 347 (720)
||++|||++ ||.+..........+.. ..+|. .+.. ..+...+||.+||++
T Consensus 229 G~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~ 308 (394)
T 4e7w_A 229 GCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEY 308 (394)
T ss_dssp HHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCS
T ss_pred HHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCC
Confidence 999999999 77765544333222221 00110 0111 223455999999999
Q ss_pred CCCCCCChHHHHcCcccCCCcc
Q 004989 348 EPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 348 dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
||.+|||+.|+|+||||+....
T Consensus 309 dP~~R~t~~e~l~hp~f~~~~~ 330 (394)
T 4e7w_A 309 TPSARLTAIEALCHPFFDELRT 330 (394)
T ss_dssp SGGGSCCHHHHHTSGGGSTTTS
T ss_pred ChhhCCCHHHHhcChhhhhhcc
Confidence 9999999999999999998644
No 105
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=1.3e-33 Score=300.24 Aligned_cols=217 Identities=16% Similarity=0.199 Sum_probs=158.1
Q ss_pred hchhhhhhccc-CCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 63 RKHSDGVELTH-GDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~L~~-l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+..+|..+|.+ ++||||+++++ ++.+.. .+|+|||| .|++|.+++.... .+++.+++.++.||+.||.|||++
T Consensus 56 ~~~~E~~~l~~~~~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~ 130 (316)
T 2ac3_A 56 RVFREVEMLYQCQGHRNVLELIE-FFEEED---RFYLVFEKMRGGSILSHIHKRR-HFNELEASVVVQDVASALDFLHNK 130 (316)
T ss_dssp HHHHHHHHHHHTCCCTTBCCEEE-EEEETT---EEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhcCCCCeeeEEE-EEeeCC---EEEEEEEcCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHhC
Confidence 44467778877 57999999999 555443 68999999 7899999995543 499999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCc---eEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNH---VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~---vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~ 217 (720)
||+||||||+|||++.++. +||+|||++.......... ..
T Consensus 131 ~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~------------------------------~~------- 173 (316)
T 2ac3_A 131 GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCS------------------------------PI------- 173 (316)
T ss_dssp TCCCCCCCGGGEEESCSSSSCSEEECCTTCCC------------------------------------------------
T ss_pred CceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCccc------------------------------cc-------
Confidence 9999999999999997776 9999998874321110000 00
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC-----CCCCccc
Q 004989 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-----APVSCAS 292 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-----~~~s~~s 292 (720)
........+||+.|+|||++.+ ..++.++
T Consensus 174 ----------------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~ 207 (316)
T 2ac3_A 174 ----------------------------------------------STPELLTPCGSAEYMAPEVVEAFSEEASIYDKRC 207 (316)
T ss_dssp ------------------------------------------------------CCSGGGCCHHHHHHTSHHHHHHTTTH
T ss_pred ----------------------------------------------cccccccccCCcCccChHHhhcccccccCCCccc
Confidence 0000011468999999999975 4489999
Q ss_pred cchhhhchhhhccc---cCCCCch--------------HHHHHHHhhcCC--CCccccccC-chHHHHHHHcCCCCCCCC
Q 004989 293 DIYRLGVLLFELFC---PFSTGEE--------------KTRTMSSLRHRV--LPPQLLLKF-PKEASFCLWLLHPEPSGR 352 (720)
Q Consensus 293 DIwSLGvll~eLlt---pf~~~~~--------------~~~~~~~l~~~~--~p~~~~~~~-p~~~~Li~~~L~~dP~~R 352 (720)
|||||||++|||++ ||..... .......+.... +|....... +...+||.+||++||.+|
T Consensus 208 DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 287 (316)
T 2ac3_A 208 DLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQR 287 (316)
T ss_dssp HHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTS
T ss_pred ccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhC
Confidence 99999999999999 6654321 122333343332 222222233 445599999999999999
Q ss_pred CChHHHHcCcccCCC
Q 004989 353 PKMGELLQSEFLNEP 367 (720)
Q Consensus 353 pta~eiL~hp~~~~~ 367 (720)
||+.|+|+||||+..
T Consensus 288 ps~~e~l~hp~~~~~ 302 (316)
T 2ac3_A 288 LSAAQVLQHPWVQGC 302 (316)
T ss_dssp CCHHHHHHSTTCC--
T ss_pred CCHHHHhcChhhcCC
Confidence 999999999999975
No 106
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=4.5e-34 Score=309.30 Aligned_cols=213 Identities=16% Similarity=0.235 Sum_probs=161.8
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCC---CCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAA---IDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~---~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
+..+|..+|.+++||||+++++ ++..... ...+|++|||.+++|.+++.. .+++.+++.++.||+.||.|||+
T Consensus 69 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~---~~~~~~~~~i~~qi~~al~~LH~ 144 (353)
T 3coi_A 69 RAYRELLLLKHMQHENVIGLLD-VFTPASSLRNFYDFYLVMPFMQTDLQKIMGL---KFSEEKIQYLVYQMLKGLKYIHS 144 (353)
T ss_dssp HHHHHHHHHHHCCCTTBCCCSE-EECSCSSGGGCCCCEEEEECCSEEGGGTTTS---CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCcccHhh-eEecccccccceeEEEEeccccCCHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHH
Confidence 4458888999999999999999 5544332 234699999977899887732 39999999999999999999999
Q ss_pred CCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCC
Q 004989 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||+||||||+||+++.++.+||+|||.+...+..
T Consensus 145 ~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~--------------------------------------------- 179 (353)
T 3coi_A 145 AGVVHRDLKPGNLAVNEDCELKILDFGLARHADAE--------------------------------------------- 179 (353)
T ss_dssp TTCCCSSCCGGGEEECTTCCEEECSTTCTTC-------------------------------------------------
T ss_pred CCcccCCCCHHHEeECCCCcEEEeecccccCCCCC---------------------------------------------
Confidence 99999999999999999999999999887332100
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC-CCCCccccchhhh
Q 004989 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLG 298 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sDIwSLG 298 (720)
.....||+.|+|||++.+ ..++.++||||||
T Consensus 180 ------------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG 211 (353)
T 3coi_A 180 ------------------------------------------------MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVG 211 (353)
T ss_dssp ----------------------------------------------------CCSBCCSCHHHHSCCSCCCTTHHHHHHH
T ss_pred ------------------------------------------------ccccccCcCcCCHHHHhCcCCCCchhhHHHHH
Confidence 001367999999999987 5589999999999
Q ss_pred chhhhccc---cCCCCchHHHHHHHhhc-C----------------------------CCCccccccCchHHHHHHHcCC
Q 004989 299 VLLFELFC---PFSTGEEKTRTMSSLRH-R----------------------------VLPPQLLLKFPKEASFCLWLLH 346 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~-~----------------------------~~p~~~~~~~p~~~~Li~~~L~ 346 (720)
|++|+|++ ||............+.. + .++.......+...+||.+||+
T Consensus 212 ~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~ 291 (353)
T 3coi_A 212 CIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLE 291 (353)
T ss_dssp HHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSC
T ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcC
Confidence 99999999 66654433222111110 0 0011111223455699999999
Q ss_pred CCCCCCCChHHHHcCcccCCCccchH
Q 004989 347 PEPSGRPKMGELLQSEFLNEPRDSME 372 (720)
Q Consensus 347 ~dP~~Rpta~eiL~hp~~~~~~~~l~ 372 (720)
+||.+|||+.++|+||||+....+..
T Consensus 292 ~dp~~Rpt~~e~l~hp~f~~~~~~~~ 317 (353)
T 3coi_A 292 LDVDKRLTAAQALTHPFFEPFRDPEE 317 (353)
T ss_dssp SCTTTSCCHHHHHTSGGGTTTCCGGG
T ss_pred CCcccCCCHHHHhcCcchhhccCccc
Confidence 99999999999999999998755433
No 107
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=8.3e-34 Score=296.08 Aligned_cols=209 Identities=18% Similarity=0.240 Sum_probs=143.6
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++.+++||||+++++ ++.+.. .+|++||| .+++|.+++......+++.+++.++.||+.||.|||++|
T Consensus 57 ~~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ 132 (278)
T 3cok_A 57 RVQNEVKIHCQLKHPSILELYN-YFEDSN---YVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHG 132 (278)
T ss_dssp HHHHHHHHHTTBCCTTBCCEEE-EEECSS---EEEEEEECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCeEeEEE-EEccCC---eEEEEEecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3447788999999999999999 555543 67999999 789999999776667999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.++|+|||.+........
T Consensus 133 i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~--------------------------------------------- 167 (278)
T 3cok_A 133 ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHE--------------------------------------------- 167 (278)
T ss_dssp EECSSCCGGGEEECTTCCEEECCCTTCEECC-------------------------------------------------
T ss_pred eecCCCCHHHEEEcCCCCEEEEeecceeeccCCCC---------------------------------------------
Confidence 99999999999999999999999988743211100
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......||+.|+|||++.+..++.++|||||||++
T Consensus 168 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 202 (278)
T 3cok_A 168 ---------------------------------------------KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMF 202 (278)
T ss_dssp ---------------------------------------------------------------------CTHHHHHHHHH
T ss_pred ---------------------------------------------cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHH
Confidence 00013679999999999988899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
|||++ ||....... ....+.... ...+... +...+||.+||+.||.+|||+.++|+||||....
T Consensus 203 ~~l~~g~~p~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~ 270 (278)
T 3cok_A 203 YTLLIGRPPFDTDTVKN-TLNKVVLAD--YEMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLDHPFMSRNS 270 (278)
T ss_dssp HHHHHSSCSSCCCSCC------CCSSC--CCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSTTTC---
T ss_pred HHHHhCCCCCCChhHHH-HHHHHhhcc--cCCccccCHHHHHHHHHHcccCHhhCCCHHHHhcCccccCCC
Confidence 99999 665543321 111111111 1112223 3445999999999999999999999999998753
No 108
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.4e-33 Score=299.40 Aligned_cols=212 Identities=17% Similarity=0.198 Sum_probs=158.1
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++.+++||||+++++ ++.... .+++|||| .+++|.+++... ..+++..++.++.||+.||.|||++|
T Consensus 48 ~~~~E~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~i~~~l~~~l~~lH~~~ 122 (311)
T 4agu_A 48 IALREIRMLKQLKHPNLVNLLE-VFRRKR---RLHLVFEYCDHTVLHELDRYQ-RGVPEHLVKSITWQTLQAVNFCHKHN 122 (311)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EEEETT---EEEEEEECCSEEHHHHHHHTS-SCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCccchhh-eeecCC---eEEEEEEeCCCchHHHHHhhh-cCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3347888999999999999999 555443 57999999 778888877544 45999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.++|+|||.+....... +
T Consensus 123 ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~---------------------------------~------------ 157 (311)
T 4agu_A 123 CIHRDVKPENILITKHSVIKLCDFGFARLLTGPS---------------------------------D------------ 157 (311)
T ss_dssp EECCCCSGGGEEECTTSCEEECCCTTCEECC-------------------------------------------------
T ss_pred CcCCCCChhhEEEcCCCCEEEeeCCCchhccCcc---------------------------------c------------
Confidence 9999999999999999999999998874321110 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC-CCCCccccchhhhch
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVL 300 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sDIwSLGvl 300 (720)
......||++|+|||++.+ ..++.++|||||||+
T Consensus 158 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~i 192 (311)
T 4agu_A 158 ---------------------------------------------YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCV 192 (311)
T ss_dssp -----------------------------------------------------GGGCCHHHHHTCSCCCTHHHHHHHHHH
T ss_pred ---------------------------------------------ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHH
Confidence 0011367999999999987 458999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhh--cCC------------------CCc---------cccccCchHHHHHHHcCCCC
Q 004989 301 LFELFC---PFSTGEEKTRTMSSLR--HRV------------------LPP---------QLLLKFPKEASFCLWLLHPE 348 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~--~~~------------------~p~---------~~~~~~p~~~~Li~~~L~~d 348 (720)
+|+|++ ||.............. ... .+. .+....+...+|+.+||++|
T Consensus 193 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d 272 (311)
T 4agu_A 193 FAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMD 272 (311)
T ss_dssp HHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSS
T ss_pred HHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCC
Confidence 999999 6665544322211111 010 000 01122233559999999999
Q ss_pred CCCCCChHHHHcCcccCCCcc
Q 004989 349 PSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 349 P~~Rpta~eiL~hp~~~~~~~ 369 (720)
|.+|||+.|+|+||||+....
T Consensus 273 P~~Rpt~~ell~hp~f~~~~~ 293 (311)
T 4agu_A 273 PTERLTCEQLLHHPYFENIRE 293 (311)
T ss_dssp TTTSCCHHHHHTSGGGTTCC-
T ss_pred hhhcCCHHHHhcChHHHhccC
Confidence 999999999999999998744
No 109
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=1.4e-33 Score=297.69 Aligned_cols=213 Identities=17% Similarity=0.225 Sum_probs=163.8
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++..++||||+++++ ++.... .+++|||| .+++|.+++......+++..++.++.||+.||.|||++|
T Consensus 62 ~~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ 137 (302)
T 2j7t_A 62 DYIVEIEILATCDHPYIVKLLG-AYYHDG---KLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKR 137 (302)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EEECC----CEEEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhcCCCCCEeeeee-eeeeCC---eEEEEEEeCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcCC
Confidence 4446778899999999999999 554443 57999999 899999998655556999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.++|+|||++..... ..
T Consensus 138 i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~-----------------------------------~~----------- 171 (302)
T 2j7t_A 138 IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLK-----------------------------------TL----------- 171 (302)
T ss_dssp CCCCCCSGGGEEECTTSCEEECCCHHHHHHHH-----------------------------------HH-----------
T ss_pred cccCCCCHHHEEECCCCCEEEEECCCCccccc-----------------------------------cc-----------
Confidence 99999999999999999999998887621000 00
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCccccc-----CCCCCccccchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-----GAPVSCASDIYR 296 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~-----~~~~s~~sDIwS 296 (720)
. ......||+.|+|||++. +..++.++||||
T Consensus 172 -------------------------------------~-------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~s 207 (302)
T 2j7t_A 172 -------------------------------------Q-------KRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWS 207 (302)
T ss_dssp -------------------------------------H-------C-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHH
T ss_pred -------------------------------------c-------ccccccCChhhcCCeeeccccCCCCCCchhhhHHH
Confidence 0 001136899999999983 566899999999
Q ss_pred hhchhhhccc---cCCCCchHHHHHHHhhcCCCCc-cccccCch-HHHHHHHcCCCCCCCCCChHHHHcCcccCCCccc
Q 004989 297 LGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPP-QLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 297 LGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~-~~~~~~p~-~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
|||++|+|++ ||.......... .+.....+. .....++. ..+|+.+||+.||.+|||+.++++||||......
T Consensus 208 lG~il~~l~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~~~ 285 (302)
T 2j7t_A 208 LGITLIEMAQIEPPHHELNPMRVLL-KIAKSDPPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVSSITSN 285 (302)
T ss_dssp HHHHHHHHHHSSCTTTTSCHHHHHH-HHHHSCCCCCSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTSTTTTTCCCC
T ss_pred HHHHHHHHhcCCCCCccCCHHHHHH-HHhccCCcccCCccccCHHHHHHHHHHcccChhhCCCHHHHhcChHHhhhccc
Confidence 9999999999 666554443333 333322222 22334444 4599999999999999999999999999987554
No 110
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=1.6e-33 Score=297.32 Aligned_cols=212 Identities=17% Similarity=0.277 Sum_probs=162.6
Q ss_pred chhhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 004989 60 FELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 60 ~~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
..-+..+|..++.+++||||+++++ ++.... .+|+|||| .|++|.+++...+ .+++.+++.++.||+.||.|||
T Consensus 54 ~~~~~~~e~~~l~~l~hp~iv~~~~-~~~~~~---~~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH 128 (294)
T 4eqm_A 54 TLKRFEREVHNSSQLSHQNIVSMID-VDEEDD---CYYLVMEYIEGPTLSEYIESHG-PLSVDTAINFTNQILDGIKHAH 128 (294)
T ss_dssp HHHHHHHHHHHHTTCCBTTBCCEEE-EEECSS---EEEEEEECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCCceEEE-eeeeCC---eEEEEEeCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH
Confidence 3345568889999999999999999 555443 67999999 8999999995543 4999999999999999999999
Q ss_pred HCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCC
Q 004989 139 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
++||+||||||+|||++.++.+||+|||++.........
T Consensus 129 ~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~----------------------------------------- 167 (294)
T 4eqm_A 129 DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLT----------------------------------------- 167 (294)
T ss_dssp HTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC-----------------------------------------------
T ss_pred HCCcccCCCCHHHEEECCCCCEEEEeCCCcccccccccc-----------------------------------------
Confidence 999999999999999999999999999988433211000
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhh
Q 004989 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
......||+.|+|||++.+..++.++||||||
T Consensus 168 ------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG 199 (294)
T 4eqm_A 168 ------------------------------------------------QTNHVLGTVQYFSPEQAKGEATDECTDIYSIG 199 (294)
T ss_dssp -------------------------------------------------------CCSSCCHHHHHTCCCCTTHHHHHHH
T ss_pred ------------------------------------------------ccCccccCccccCHhHhcCCCCCchHhHHHHH
Confidence 00114689999999999999999999999999
Q ss_pred chhhhccc---cCCCCchHHHHHHHhhcCCCCc--cccccCchH-HHHHHHcCCCCCCCCCChHHHHcCcccC
Q 004989 299 VLLFELFC---PFSTGEEKTRTMSSLRHRVLPP--QLLLKFPKE-ASFCLWLLHPEPSGRPKMGELLQSEFLN 365 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~~p~--~~~~~~p~~-~~Li~~~L~~dP~~Rpta~eiL~hp~~~ 365 (720)
|++|||++ ||............+.....+. .....+|.. .+++.+||++||.+||+..+.+.++|..
T Consensus 200 ~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~ 272 (294)
T 4eqm_A 200 IVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSS 272 (294)
T ss_dssp HHHHHHHHSSCSSCSSCHHHHHHHHHSSCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHT
T ss_pred HHHHHHHhCCCCCCCCChHHHHHHHhhccCCCcchhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHH
Confidence 99999999 7777666555555554433221 223344444 4999999999999999555555555543
No 111
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.1e-33 Score=307.88 Aligned_cols=214 Identities=17% Similarity=0.195 Sum_probs=162.0
Q ss_pred hhhhhhcccCCCCCceecccceeecC----------------------------------CCCCcEEEEEecCCCCHHHH
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENE----------------------------------AAIDPFVHAIEWGDVSLRQW 110 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~----------------------------------~~~~~~~lv~E~~ggsL~~~ 110 (720)
.+|..+|..++|||||++++.++... .....+++||||.+++|.+.
T Consensus 48 ~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~ 127 (383)
T 3eb0_A 48 NRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHKV 127 (383)
T ss_dssp CHHHHHHTTCCCTTBCCEEEEEEEC-------------------------------------CCEEEEEECCCSEEHHHH
T ss_pred HHHHHHHHHcCCCCccchhheeeecCcccccccccccccccccccccccccccccccccCCCceEEEEEEecCCccHHHH
Confidence 37888999999999999999544322 22335899999966798888
Q ss_pred Hh---CCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEc-cCCceEEeecCcccCCCCCCccccccccccc
Q 004989 111 LD---KPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMS-SFNHVSFIESASCSDSGSDSHEEGLNTQNME 186 (720)
Q Consensus 111 L~---~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~-~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~ 186 (720)
+. ..+..+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++.......
T Consensus 128 l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~----------- 196 (383)
T 3eb0_A 128 LKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE----------- 196 (383)
T ss_dssp HHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS-----------
T ss_pred HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC-----------
Confidence 73 3455699999999999999999999999999999999999998 68899999998874321110
Q ss_pred ccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCc
Q 004989 187 TKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPM 266 (720)
Q Consensus 187 ~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~ 266 (720)
T Consensus 197 -------------------------------------------------------------------------------- 196 (383)
T 3eb0_A 197 -------------------------------------------------------------------------------- 196 (383)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccccCCcccCcccccCCC-CCccccchhhhchhhhccc---cCCCCchHHHHHHHhhcCC-----------------
Q 004989 267 KQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRV----------------- 325 (720)
Q Consensus 267 ~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~----------------- 325 (720)
......||+.|+|||++.+.. ++.++|||||||++|||++ ||............+....
T Consensus 197 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~ 276 (383)
T 3eb0_A 197 PSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEV 276 (383)
T ss_dssp CCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--C
T ss_pred CCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccc
Confidence 001146799999999998765 8999999999999999999 6766554433333222100
Q ss_pred -CCc--------cccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004989 326 -LPP--------QLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 326 -~p~--------~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
+|. .+....+ ...+||.+||++||.+|||+.|+|+||||+....
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~ 330 (383)
T 3eb0_A 277 RFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDHLRN 330 (383)
T ss_dssp CCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGHHHHH
T ss_pred cCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcCHHHHHHHh
Confidence 110 0112233 3459999999999999999999999999987533
No 112
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=2e-33 Score=312.89 Aligned_cols=197 Identities=16% Similarity=0.220 Sum_probs=151.3
Q ss_pred CCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcE
Q 004989 74 GDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCF 152 (720)
Q Consensus 74 l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NI 152 (720)
.+||||+++++ ++.... .+|+||||.+++|.+++... ...+++..++.|+.||+.||.|||++|||||||||+||
T Consensus 156 ~~~~~iv~~~~-~~~~~~---~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NI 231 (429)
T 3kvw_A 156 DNTMNVIHMLE-NFTFRN---HICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENI 231 (429)
T ss_dssp TSCSCBCCEEE-EEEETT---EEEEEECCCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGE
T ss_pred cCCcCEEEEEe-ecccCC---eEEEEEeccCCCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHe
Confidence 37889999999 554443 68999999778999999443 34599999999999999999999999999999999999
Q ss_pred EEccCCc--eEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCCC
Q 004989 153 VMSSFNH--VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSS 230 (720)
Q Consensus 153 Ll~~~~~--vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~ 230 (720)
|++.++. +||+|||++...+..
T Consensus 232 Ll~~~~~~~vkL~DFG~a~~~~~~-------------------------------------------------------- 255 (429)
T 3kvw_A 232 LLKQQGRSGIKVIDFGSSCYEHQR-------------------------------------------------------- 255 (429)
T ss_dssp EESSTTSCCEEECCCTTCEETTCC--------------------------------------------------------
T ss_pred EEccCCCcceEEeecccceecCCc--------------------------------------------------------
Confidence 9998887 999988887321110
Q ss_pred ccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhccc---c
Q 004989 231 AYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---P 307 (720)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt---p 307 (720)
....+||+.|+|||++.+..++.++|||||||++|||++ |
T Consensus 256 -------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~p 298 (429)
T 3kvw_A 256 -------------------------------------VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPL 298 (429)
T ss_dssp -------------------------------------CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred -------------------------------------ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCC
Confidence 011468999999999999999999999999999999999 5
Q ss_pred CCCCchHHHHHHHhhc-CCCCccc-------------------------------------------------------c
Q 004989 308 FSTGEEKTRTMSSLRH-RVLPPQL-------------------------------------------------------L 331 (720)
Q Consensus 308 f~~~~~~~~~~~~l~~-~~~p~~~-------------------------------------------------------~ 331 (720)
|............+.. +..++.+ .
T Consensus 299 f~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 378 (429)
T 3kvw_A 299 LPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALK 378 (429)
T ss_dssp SCCSSHHHHHHHHHHHHCCCCHHHHHTBTTHHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTT
T ss_pred CCCCCHHHHHHHHHHHcCCCCHHHHHhhhhhhhccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhcc
Confidence 6655443222222111 1111100 0
Q ss_pred -ccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 332 -LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 332 -~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
...+...+||.+||++||.+|||+.|+|+||||+..
T Consensus 379 ~~~~~~~~dli~~~L~~dP~~Rpta~e~L~Hpw~~~~ 415 (429)
T 3kvw_A 379 GCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRRR 415 (429)
T ss_dssp TCCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTTC--
T ss_pred ccchHHHHHHHHHHCCCChhhCCCHHHHhCChhhccC
Confidence 012345699999999999999999999999999976
No 113
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=7.5e-34 Score=308.28 Aligned_cols=208 Identities=18% Similarity=0.194 Sum_probs=161.7
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ- 140 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~- 140 (720)
+..+|..+|.+++||||+++++ ++..+. .+|+|||| .|++|.+++.... .+++..+..++.||+.||.|||++
T Consensus 77 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~~i~~~l~~lh~~~ 151 (360)
T 3eqc_A 77 QIIRELQVLHECNSPYIVGFYG-AFYSDG---EISICMEHMDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLREKH 151 (360)
T ss_dssp HHHHHHGGGGGCCCTTBCCEEE-EEEETT---EEEEEECCCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCEEEEeE-EEEECC---EEEEEEECCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHhC
Confidence 4458888999999999999999 554443 58999999 7899999995543 499999999999999999999996
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+|||++.++.++|+|||++......
T Consensus 152 ~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~---------------------------------------------- 185 (360)
T 3eqc_A 152 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---------------------------------------------- 185 (360)
T ss_dssp CCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH----------------------------------------------
T ss_pred CEEcCCccHHHEEECCCCCEEEEECCCCcccccc----------------------------------------------
Confidence 9999999999999999999999999876211000
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhch
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
......||+.|+|||++.+..++.++|||||||+
T Consensus 186 ----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~i 219 (360)
T 3eqc_A 186 ----------------------------------------------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLS 219 (360)
T ss_dssp ----------------------------------------------C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHH
T ss_pred ----------------------------------------------cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHH
Confidence 0011468999999999999889999999999999
Q ss_pred hhhccc---cCCCCchHHH-----------------------------------------HHHHhhcCCCCccccccCc-
Q 004989 301 LFELFC---PFSTGEEKTR-----------------------------------------TMSSLRHRVLPPQLLLKFP- 335 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~-----------------------------------------~~~~l~~~~~p~~~~~~~p- 335 (720)
+|+|++ ||........ ....+.....+......++
T Consensus 220 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (360)
T 3eqc_A 220 LVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSL 299 (360)
T ss_dssp HHHHHHTSCCSSCCCHHHHHHHHC------------------------------CCCHHHHHHHHHHSCCCCCCTTTSCH
T ss_pred HHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcccccccCCCCcccchhhhhHHhccCCCCCCcccccH
Confidence 999999 7765433211 1111112222222222233
Q ss_pred hHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 336 KEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 336 ~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
...+||.+||++||.+|||+.|+|+||||+..
T Consensus 300 ~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 331 (360)
T 3eqc_A 300 EFQDFVNKCLIKNPAERADLKQLMVHAFIKRS 331 (360)
T ss_dssp HHHHHHHHHHCSSTTTSCCHHHHHTSHHHHHH
T ss_pred HHHHHHHHHhhcChhhCCCHHHHhhChHhhcc
Confidence 44599999999999999999999999999864
No 114
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=2.3e-33 Score=311.57 Aligned_cols=214 Identities=16% Similarity=0.204 Sum_probs=161.0
Q ss_pred hhhhhhcccCCCCCceecccceeecCC--CCCcEEEEEecCCCCHHHHHh---CCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEA--AIDPFVHAIEWGDVSLRQWLD---KPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~--~~~~~~lv~E~~ggsL~~~L~---~~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
.+|..+|.+++|||||++++.++.... ...++++||||.+++|.+++. .....+++..++.|+.||+.||.|||+
T Consensus 95 ~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~ 174 (420)
T 1j1b_A 95 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 174 (420)
T ss_dssp CHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEEEECCCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEeehhcccccHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 368889999999999999995544332 223467999997778887773 344569999999999999999999999
Q ss_pred CCceeccCCCCcEEEccC-CceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCC
Q 004989 140 QGIVVHNVRPSCFVMSSF-NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~-~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
+||+||||||+|||++.+ +.+||+|||+++......
T Consensus 175 ~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~~~~------------------------------------------- 211 (420)
T 1j1b_A 175 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE------------------------------------------- 211 (420)
T ss_dssp TTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTTC-------------------------------------------
T ss_pred CCccccCCChhhEEEeCCCCeEEeccchhhhhcccCC-------------------------------------------
Confidence 999999999999999955 568999888874321100
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC-CCCccccchhh
Q 004989 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRL 297 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSL 297 (720)
.....+||++|+|||++.+. .|+.++|||||
T Consensus 212 ------------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSl 243 (420)
T 1j1b_A 212 ------------------------------------------------PNVSYICSRYYRAPELIFGATDYTSSIDVWSA 243 (420)
T ss_dssp ------------------------------------------------CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHH
T ss_pred ------------------------------------------------CceeeeeCCCcCCHHHHcCCCCCCchhhhHHH
Confidence 00114789999999999775 59999999999
Q ss_pred hchhhhccc---cCCCCchHHHHHHHhhc------------------CCCCcc--------cccc-CchHHHHHHHcCCC
Q 004989 298 GVLLFELFC---PFSTGEEKTRTMSSLRH------------------RVLPPQ--------LLLK-FPKEASFCLWLLHP 347 (720)
Q Consensus 298 Gvll~eLlt---pf~~~~~~~~~~~~l~~------------------~~~p~~--------~~~~-~p~~~~Li~~~L~~ 347 (720)
||+||||++ ||............+.. ..+|.. +... .+...+||.+||++
T Consensus 244 G~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~ 323 (420)
T 1j1b_A 244 GCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEY 323 (420)
T ss_dssp HHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCS
T ss_pred HHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccC
Confidence 999999999 67665544333222221 001110 1112 23455999999999
Q ss_pred CCCCCCChHHHHcCcccCCCcc
Q 004989 348 EPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 348 dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
||.+|||+.|+|+||||.....
T Consensus 324 dP~~R~t~~e~l~hp~f~~~~~ 345 (420)
T 1j1b_A 324 TPTARLTPLEACAHSFFDELRD 345 (420)
T ss_dssp SGGGSCCHHHHHTSGGGGGGGC
T ss_pred ChhHCCCHHHHhCCHhhccccc
Confidence 9999999999999999987643
No 115
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.5e-33 Score=303.56 Aligned_cols=218 Identities=18% Similarity=0.199 Sum_probs=164.2
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC---------------------------
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP--------------------------- 114 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~--------------------------- 114 (720)
+..+|..+|.+++|||||++++ ++.+.. .+|+|||| .|++|.+++...
T Consensus 74 ~~~~E~~~l~~l~hpniv~~~~-~~~~~~---~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (345)
T 3hko_A 74 RIKTEVRLMKKLHHPNIARLYE-VYEDEQ---YICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEA 149 (345)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EEECSS---EEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCcceeeh-hhccCC---eEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccc
Confidence 4447888999999999999999 555443 68999999 899999998410
Q ss_pred ------------CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCC--ceEEeecCcccCCCCCCccccc
Q 004989 115 ------------KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFN--HVSFIESASCSDSGSDSHEEGL 180 (720)
Q Consensus 115 ------------~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~--~vkliDfg~a~~~g~~~~~~~~ 180 (720)
...+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||.+.........
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~--- 226 (345)
T 3hko_A 150 INGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNG--- 226 (345)
T ss_dssp HHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC---
T ss_pred cccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEecCCCceEEEeeccccccccccCcc---
Confidence 11246788999999999999999999999999999999998766 8999999987432110000
Q ss_pred ccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcc
Q 004989 181 NTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEK 260 (720)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~ 260 (720)
.
T Consensus 227 ----------------------------~--------------------------------------------------- 227 (345)
T 3hko_A 227 ----------------------------E--------------------------------------------------- 227 (345)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ----------------------------c---------------------------------------------------
Confidence 0
Q ss_pred cCCCCccccccccCCcccCcccccC--CCCCccccchhhhchhhhccc---cCCCCchHHHHHHHhhcCC-CC-cccccc
Q 004989 261 KQPFPMKQILLMETNWYASPEELAG--APVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRV-LP-PQLLLK 333 (720)
Q Consensus 261 ~~~~~~~~~~~~GT~~Y~APE~l~~--~~~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~-~p-~~~~~~ 333 (720)
........||+.|+|||++.+ ..++.++|||||||++|||++ ||............+.... ++ +.....
T Consensus 228 ----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (345)
T 3hko_A 228 ----YYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVL 303 (345)
T ss_dssp -----------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCTTSGGGGGS
T ss_pred ----cccccccCCCccccCchhhccCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHhcccccCCcccccC
Confidence 000011468999999999976 558999999999999999999 7776655544443333322 22 222223
Q ss_pred CchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCccc
Q 004989 334 FPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 334 ~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
.+...+||.+||.+||.+|||+.++|+||||+...+.
T Consensus 304 ~~~~~~li~~~l~~~p~~Rps~~~~l~hp~~~~~~~~ 340 (345)
T 3hko_A 304 SPLARDLLSNLLNRNVDERFDAMRALQHPWISQFSDK 340 (345)
T ss_dssp CHHHHHHHHHHSCSCTTTSCCHHHHHHSHHHHTTSSC
T ss_pred CHHHHHHHHHHcCCChhHCCCHHHHhcChhhccChHh
Confidence 4455699999999999999999999999999987543
No 116
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=7.4e-35 Score=318.72 Aligned_cols=203 Identities=12% Similarity=0.091 Sum_probs=149.7
Q ss_pred hhh---hhcccCCCCCceecccc------eeecCCC------------C--CcEEEEEecCCCCHHHHHhCCCC------
Q 004989 66 SDG---VELTHGDHLRNQGGLSG------VCENEAA------------I--DPFVHAIEWGDVSLRQWLDKPKR------ 116 (720)
Q Consensus 66 ~e~---~~L~~l~HpnIV~l~~~------~~~~~~~------------~--~~~~lv~E~~ggsL~~~L~~~~~------ 116 (720)
+|. .+|++++|||||++++. ++++... . ...|++|||.+|+|.+++...+.
T Consensus 122 ~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~~g~L~~~l~~~~~~~~~~~ 201 (377)
T 3byv_A 122 EEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHK 201 (377)
T ss_dssp HHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEECTTSCSEEEC------CEEESEEEEEECCSEEHHHHHHHHHHTTTTTH
T ss_pred HHHHHHHhccccCCHHHHHHHhhhhhhhhhhhccCCccccccccCCCceEEEEEEEEEeccCCCHHHHHHhccccccccc
Confidence 555 67888899999999942 2332211 0 13789999988899999954322
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCch
Q 004989 117 SVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPL 196 (720)
Q Consensus 117 ~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 196 (720)
.+++..++.|+.||+.||.|||++||+||||||+|||++.++.+||+|||++...+..
T Consensus 202 ~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~---------------------- 259 (377)
T 3byv_A 202 SLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAR---------------------- 259 (377)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCGGGCEETTCE----------------------
T ss_pred cccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEechhheecCCc----------------------
Confidence 1334888899999999999999999999999999999999999999988887321100
Q ss_pred hhhhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCc
Q 004989 197 DMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNW 276 (720)
Q Consensus 197 ~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~ 276 (720)
.....| +.
T Consensus 260 -----------------------------------------------------------------------~~~~~g-~~ 267 (377)
T 3byv_A 260 -----------------------------------------------------------------------VVSSVS-RG 267 (377)
T ss_dssp -----------------------------------------------------------------------EECCCC-TT
T ss_pred -----------------------------------------------------------------------ccCCCC-cC
Confidence 011467 99
Q ss_pred ccCcccccCC-----------CCCccccchhhhchhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHH
Q 004989 277 YASPEELAGA-----------PVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCL 342 (720)
Q Consensus 277 Y~APE~l~~~-----------~~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~ 342 (720)
|+|||++.+. .++.++|||||||++|||++ ||...... .....+.. ......+...+||.
T Consensus 268 y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~-~~~~~~~~-----~~~~~~~~~~~li~ 341 (377)
T 3byv_A 268 FEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAAL-GGSEWIFR-----SCKNIPQPVRALLE 341 (377)
T ss_dssp CCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSSCCC-------CCSGGGGS-----SCCCCCHHHHHHHH
T ss_pred ccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHCCCCCcccccc-cchhhhhh-----hccCCCHHHHHHHH
Confidence 9999999887 79999999999999999999 55432211 01111111 11122344559999
Q ss_pred HcCCCCCCCCCChHHHHcCcccCCCc
Q 004989 343 WLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 343 ~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
+||.+||.+|||+.|+|+||||+...
T Consensus 342 ~~L~~dp~~Rpt~~e~l~hp~f~~~~ 367 (377)
T 3byv_A 342 GFLRYPKEDRLLPLQAMETPEYEQLR 367 (377)
T ss_dssp HHTCSSGGGCCCHHHHHTSHHHHHHH
T ss_pred HHcCCCchhCCCHHHHhhChHHHHHH
Confidence 99999999999999999999998753
No 117
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=3.7e-33 Score=300.14 Aligned_cols=208 Identities=20% Similarity=0.258 Sum_probs=164.8
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++..++||||+++++ ++.+.. .+|++||| .+++|.+++... ..+++.+++.++.||+.||.|||++|
T Consensus 87 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ 161 (335)
T 2owb_A 87 KMSMEISIHRSLAHQHVVGFHG-FFEDND---FVFVVLELCRRRSLLELHKRR-KALTEPEARYYLRQIVLGCQYLHRNR 161 (335)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEE-EEECSS---EEEEEECCCTTCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCCCeEEE-EEecCC---eEEEEEecCCCCCHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3447888999999999999999 555543 67999999 889999998543 34999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||.+........
T Consensus 162 ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~--------------------------------------------- 196 (335)
T 2owb_A 162 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE--------------------------------------------- 196 (335)
T ss_dssp EECSCCCGGGEEECTTCCEEECCCTTCEECCSTTC---------------------------------------------
T ss_pred CEecCCCchhEEEcCCCCEEEeeccCceecccCcc---------------------------------------------
Confidence 99999999999999999999999988743211100
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......||+.|+|||++.+..++.++|||||||++
T Consensus 197 ---------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il 231 (335)
T 2owb_A 197 ---------------------------------------------RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIM 231 (335)
T ss_dssp ---------------------------------------------CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHH
T ss_pred ---------------------------------------------cccccCCCccccCHHHhccCCCCchhhHHHHHHHH
Confidence 00114689999999999998899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
|+|++ ||...... .....+...... +...+ +...+||.+||+.||.+|||+.|+|+||||....
T Consensus 232 ~~l~~g~~pf~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~~~~~~~~~ 299 (335)
T 2owb_A 232 YTLLVGKPPFETSCLK-ETYLRIKKNEYS--IPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGY 299 (335)
T ss_dssp HHHHHSSCTTCCSSHH-HHHHHHHHTCCC--CCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHTSC
T ss_pred HHHHHCcCCCCCCCHH-HHHHHHhcCCCC--CCccCCHHHHHHHHHHccCChhHCcCHHHHhcCccccCCC
Confidence 99999 66654433 223333322221 11223 4456999999999999999999999999998753
No 118
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=2.8e-33 Score=299.47 Aligned_cols=209 Identities=14% Similarity=0.206 Sum_probs=158.4
Q ss_pred hchhhhhhcccCC-CCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 63 RKHSDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~L~~l~-HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+..+|..+|.++. ||||+++++ ++.+.. ....+++||| .+++|.+++.. +++.+++.++.||+.||.|||++
T Consensus 76 ~~~~E~~~l~~l~~~~~i~~~~~-~~~~~~-~~~~~lv~e~~~~~~l~~~~~~----~~~~~~~~~~~qi~~~l~~lH~~ 149 (330)
T 3nsz_A 76 KIKREIKILENLRGGPNIITLAD-IVKDPV-SRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCHSM 149 (330)
T ss_dssp HHHHHHHHHHHHTTSTTBCCEEE-EEECTT-TCCEEEEEECCCCCCHHHHGGG----CCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCCCCEEEeee-eeccCC-CCceEEEEeccCchhHHHHHHh----CCHHHHHHHHHHHHHHHHHHHhC
Confidence 3447788899987 999999999 554432 2368999999 88999998843 89999999999999999999999
Q ss_pred CceeccCCCCcEEEccCC-ceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFN-HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~-~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
||+||||||+|||++.++ .+||+|||++.......
T Consensus 150 ~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~-------------------------------------------- 185 (330)
T 3nsz_A 150 GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ-------------------------------------------- 185 (330)
T ss_dssp TEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTC--------------------------------------------
T ss_pred CeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCC--------------------------------------------
Confidence 999999999999999776 89999998874321110
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC-CCCCccccchhhh
Q 004989 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLG 298 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sDIwSLG 298 (720)
......||+.|+|||++.+ ..++.++||||||
T Consensus 186 -----------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG 218 (330)
T 3nsz_A 186 -----------------------------------------------EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLG 218 (330)
T ss_dssp -----------------------------------------------CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHH
T ss_pred -----------------------------------------------ccccccccccccChhhhcCCCcCCchhhHHHHH
Confidence 0011367999999999987 5589999999999
Q ss_pred chhhhccc---cCCCCchHHHHHHHhh-------------c--CCCCcc--------------------ccc-cCchHHH
Q 004989 299 VLLFELFC---PFSTGEEKTRTMSSLR-------------H--RVLPPQ--------------------LLL-KFPKEAS 339 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~-------------~--~~~p~~--------------------~~~-~~p~~~~ 339 (720)
|++|||++ ||.........+..+. . ...++. ... ..+...+
T Consensus 219 ~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (330)
T 3nsz_A 219 CMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALD 298 (330)
T ss_dssp HHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHH
T ss_pred HHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccccccchhhhhhhccccchhhhccccccccCCHHHHH
Confidence 99999999 6644322211111111 0 011111 011 2344569
Q ss_pred HHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004989 340 FCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 340 Li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
||.+||++||.+|||+.|+|+||||+...
T Consensus 299 li~~~L~~dP~~Rpta~e~l~hp~f~~~~ 327 (330)
T 3nsz_A 299 FLDKLLRYDHQSRLTAREAMEHPYFYTVV 327 (330)
T ss_dssp HHHTTSCSSGGGSCCHHHHHTSGGGTTCC
T ss_pred HHHHHhcCCcccCCCHHHHhcCccHhhhc
Confidence 99999999999999999999999999863
No 119
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=4.6e-33 Score=297.09 Aligned_cols=213 Identities=16% Similarity=0.214 Sum_probs=159.7
Q ss_pred hhhhhcc---cCCCCCceecccceeec-CCCCCcEEEEEecCCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 66 SDGVELT---HGDHLRNQGGLSGVCEN-EAAIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 66 ~e~~~L~---~l~HpnIV~l~~~~~~~-~~~~~~~~lv~E~~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+|..++. .++||||+++++.+... ......+++||||.+++|.+++.. ....+++..++.++.||+.||.|||++
T Consensus 60 ~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~ 139 (326)
T 1blx_A 60 REVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH 139 (326)
T ss_dssp HHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhhhccCCCCeEeeeeeeeecccCCCceEEEEEecCCCCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 4444444 45899999999943321 122346899999966799999954 334599999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+||+++.++.+||+|||.+...+...
T Consensus 140 gi~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~--------------------------------------------- 174 (326)
T 1blx_A 140 RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQM--------------------------------------------- 174 (326)
T ss_dssp TCCCCCCCGGGEEECTTCCEEECSCCSCCCCCGGG---------------------------------------------
T ss_pred CceeccCCHHHeEEcCCCCEEEecCcccccccCCC---------------------------------------------
Confidence 99999999999999999999999998874321100
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhch
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
......||+.|+|||++.+..++.++|||||||+
T Consensus 175 ----------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i 208 (326)
T 1blx_A 175 ----------------------------------------------ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCI 208 (326)
T ss_dssp ----------------------------------------------GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHH
T ss_pred ----------------------------------------------CccccccccceeCHHHHhcCCCCcchhHHHHHHH
Confidence 0011467999999999998889999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCC------------------------ccccccCch-HHHHHHHcCCCCCCCC
Q 004989 301 LFELFC---PFSTGEEKTRTMSSLRHRVLP------------------------PQLLLKFPK-EASFCLWLLHPEPSGR 352 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p------------------------~~~~~~~p~-~~~Li~~~L~~dP~~R 352 (720)
+|+|++ ||............+.....+ ..+....+. ..+||.+||..||.+|
T Consensus 209 l~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 288 (326)
T 1blx_A 209 FAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKR 288 (326)
T ss_dssp HHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTS
T ss_pred HHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccC
Confidence 999999 666654443222222110000 011122333 3499999999999999
Q ss_pred CChHHHHcCcccCCCcc
Q 004989 353 PKMGELLQSEFLNEPRD 369 (720)
Q Consensus 353 pta~eiL~hp~~~~~~~ 369 (720)
||+.|+|+||||+....
T Consensus 289 pt~~e~l~hp~~~~~~~ 305 (326)
T 1blx_A 289 ISAYSALSHPYFQDLER 305 (326)
T ss_dssp CCHHHHHTSGGGTTCCC
T ss_pred CCHHHHhcCccccccch
Confidence 99999999999998744
No 120
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=1.5e-33 Score=303.36 Aligned_cols=203 Identities=19% Similarity=0.223 Sum_probs=157.9
Q ss_pred hcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHHHC-Cceec
Q 004989 70 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHSQ-GIVVH 145 (720)
Q Consensus 70 ~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~---~~~~l~~~~~~~i~~QIl~aL~yLHs~-gIvHr 145 (720)
.+..++||||+++++ ++.... .+|+||||.+++|.+++.. ....+++..++.|+.||+.||.|||++ ||+||
T Consensus 103 ~~~~~~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~~ivH~ 178 (340)
T 3an0_A 103 SMRTVDCPFTVTFYG-ALFREG---DVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHR 178 (340)
T ss_dssp HHTTCCCTTTCCEEE-EEECSS---CEEEEECCCSEEHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHTCCCCC
T ss_pred HHhhcCCCcEEEEee-EEEeCC---cEEEEHHHhhCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecC
Confidence 378899999999999 554443 5799999966699998842 455699999999999999999999997 99999
Q ss_pred cCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccccc
Q 004989 146 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 225 (720)
Q Consensus 146 DLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~ 225 (720)
||||+|||++.++.+||+|||++......
T Consensus 179 Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~--------------------------------------------------- 207 (340)
T 3an0_A 179 DVKPSNVLINALGQVKMCDFGISGYLVDS--------------------------------------------------- 207 (340)
T ss_dssp SCCSTTEEECSTTCEEECCCSHHHHHSCH---------------------------------------------------
T ss_pred CCCHHHEEECCCCCEEEeeCCCceecccc---------------------------------------------------
Confidence 99999999999999999998887321100
Q ss_pred ccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC----CCCCccccchhhhchh
Q 004989 226 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG----APVSCASDIYRLGVLL 301 (720)
Q Consensus 226 ~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~----~~~s~~sDIwSLGvll 301 (720)
.......||+.|+|||++.+ ..++.++|||||||++
T Consensus 208 ----------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il 247 (340)
T 3an0_A 208 ----------------------------------------VAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITM 247 (340)
T ss_dssp ----------------------------------------HHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHH
T ss_pred ----------------------------------------cccccCCCCccccCccccccccccCCCCchhhHHHHHHHH
Confidence 00011368999999999754 3589999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|||++ ||.........+..+.....+......+ +...+||.+||..||.+|||+.|+++||||+..
T Consensus 248 ~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~ 317 (340)
T 3an0_A 248 IELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLH 317 (340)
T ss_dssp HHHHHTSCSSCCCSCHHHHHHHHHHSCCCCCCGGGSCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred HHHHHCCCCCccccchHHHHHHHhcCCCCCCCcccCCHHHHHHHHHHccCCcccCcCHHHHhcCcCcccc
Confidence 99999 7765443333333333333333333333 445599999999999999999999999999865
No 121
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=4e-33 Score=299.14 Aligned_cols=210 Identities=20% Similarity=0.252 Sum_probs=159.0
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++.+++||||+++++ ++.... .+|+|||| .+++|.+++... ..+++..++.++.||+.||.|||++|
T Consensus 70 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~ 144 (331)
T 4aaa_A 70 IAMREIKLLKQLRHENLVNLLE-VCKKKK---RWYLVFEFVDHTILDDLELFP-NGLDYQVVQKYLFQIINGIGFCHSHN 144 (331)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EEEETT---EEEEEEECCSEEHHHHHHHST-TCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhhCCCCCEeeEEE-EeecCC---EEEEEEecCCcchHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3447888999999999999999 555443 67999999 777777776444 34999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||.+........
T Consensus 145 ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--------------------------------------------- 179 (331)
T 4aaa_A 145 IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE--------------------------------------------- 179 (331)
T ss_dssp CCCCCCCGGGEEECTTSCEEECCCTTC-----------------------------------------------------
T ss_pred EEccCcChheEEEcCCCcEEEEeCCCceeecCCcc---------------------------------------------
Confidence 99999999999999999999999998743211100
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC-CCCccccchhhhch
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVL 300 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGvl 300 (720)
......||++|+|||++.+. .++.++|||||||+
T Consensus 180 ---------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~i 214 (331)
T 4aaa_A 180 ---------------------------------------------VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCL 214 (331)
T ss_dssp -------------------------------------------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHH
T ss_pred ---------------------------------------------ccCCCcCCccccCcccccCCCCcchHHHHHHHHHH
Confidence 00113689999999999876 58999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhc-CCCCc------------------c----------ccccCchHHHHHHHcCCCC
Q 004989 301 LFELFC---PFSTGEEKTRTMSSLRH-RVLPP------------------Q----------LLLKFPKEASFCLWLLHPE 348 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~-~~~p~------------------~----------~~~~~p~~~~Li~~~L~~d 348 (720)
+|+|++ ||............+.. +..++ . .....+...+||.+||++|
T Consensus 215 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d 294 (331)
T 4aaa_A 215 VTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHID 294 (331)
T ss_dssp HHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSS
T ss_pred HHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccccccccCccccccchhhhcccchhHHHHHHHHHHhccC
Confidence 999999 67665443322222110 00000 0 0112234459999999999
Q ss_pred CCCCCChHHHHcCcccCCC
Q 004989 349 PSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 349 P~~Rpta~eiL~hp~~~~~ 367 (720)
|.+|||+.|+|+||||+..
T Consensus 295 P~~Rpt~~ell~hp~f~~~ 313 (331)
T 4aaa_A 295 PDKRPFCAELLHHDFFQMD 313 (331)
T ss_dssp GGGSCCGGGGGGSHHHHGG
T ss_pred cccCCCHHHHhcCchhccC
Confidence 9999999999999999874
No 122
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=3.5e-33 Score=301.01 Aligned_cols=210 Identities=18% Similarity=0.212 Sum_probs=165.6
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHH------HhCC-CCCCCHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQW------LDKP-KRSVDVYECLHIFRQIVEIV 134 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~------L~~~-~~~l~~~~~~~i~~QIl~aL 134 (720)
+..+|..++.+++||||+++++ ++.... .+|+|||| .+++|.++ +... ...+++..++.++.||+.||
T Consensus 89 ~~~~E~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l 164 (348)
T 2pml_X 89 DFKNELQIITDIKNEYCLTCEG-IITNYD---EVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSF 164 (348)
T ss_dssp HHHHHHHHHTTCCCTTBCCCSE-EEESSS---EEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCcceEEE-EEeeCC---eEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHH
Confidence 3447888999999999999999 555443 68999999 78899998 6332 45699999999999999999
Q ss_pred HHHHH-CCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccc
Q 004989 135 YAAHS-QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLV 213 (720)
Q Consensus 135 ~yLHs-~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla 213 (720)
.|||+ +||+||||||+||+++.++.++|+|||.+......
T Consensus 165 ~~lH~~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~--------------------------------------- 205 (348)
T 2pml_X 165 SYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDK--------------------------------------- 205 (348)
T ss_dssp HHHHHTSCEECCCCCGGGEEECTTSCEEECCCTTCEECBTT---------------------------------------
T ss_pred HHHhccCCEeecCCChHhEEEcCCCcEEEeccccccccccc---------------------------------------
Confidence 99999 99999999999999999999999999887332110
Q ss_pred cCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC-CCCc-c
Q 004989 214 TAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSC-A 291 (720)
Q Consensus 214 ~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~-~ 291 (720)
......||+.|+|||++.+. .++. +
T Consensus 206 -----------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~ 232 (348)
T 2pml_X 206 -----------------------------------------------------KIKGSRGTYEFMPPEFFSNESSYNGAK 232 (348)
T ss_dssp -----------------------------------------------------EECSSCSCGGGCCGGGGSSCCCEEHHH
T ss_pred -----------------------------------------------------cccCCCCCcCccCchhhcCCCCCCcch
Confidence 00114689999999999887 5666 9
Q ss_pred ccchhhhchhhhccc---cCCCCchHHHHHHHhhcCCCCccc-----------------cccC-chHHHHHHHcCCCCCC
Q 004989 292 SDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQL-----------------LLKF-PKEASFCLWLLHPEPS 350 (720)
Q Consensus 292 sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~-----------------~~~~-p~~~~Li~~~L~~dP~ 350 (720)
+|||||||++|||++ ||............+.....+... ...+ +...+||.+||+.||.
T Consensus 233 ~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~ 312 (348)
T 2pml_X 233 VDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPA 312 (348)
T ss_dssp HHHHHHHHHHHHHHHSSCSSCCSSCSHHHHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGG
T ss_pred hhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChh
Confidence 999999999999999 676655534455555443222110 0223 3445999999999999
Q ss_pred CCCChHHHHcCcccCCCc
Q 004989 351 GRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 351 ~Rpta~eiL~hp~~~~~~ 368 (720)
+|||+.|+|+||||+...
T Consensus 313 ~Rps~~e~l~hp~f~~~~ 330 (348)
T 2pml_X 313 ERITSEDALKHEWLADTN 330 (348)
T ss_dssp GSCCHHHHHTSGGGTTCC
T ss_pred hCCCHHHHhcCccccCCC
Confidence 999999999999999863
No 123
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=4.2e-33 Score=291.89 Aligned_cols=205 Identities=14% Similarity=0.190 Sum_probs=163.0
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++.+++||||+++++ ++.+.. .+|++||| .+++|.+++...+ .+++..++.++.||+.||.|||++|
T Consensus 60 ~~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~ 134 (284)
T 2vgo_A 60 QLRREIEIQSHLRHPNILRMYN-YFHDRK---RIYLMLEFAPRGELYKELQKHG-RFDEQRSATFMEELADALHYCHERK 134 (284)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEE-EEECSS---EEEEEECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHhcCCCCCEeeEEE-EEEcCC---EEEEEEEeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3446778999999999999999 555443 67999999 7889999995543 4999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.++|+|||.+......
T Consensus 135 i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~----------------------------------------------- 167 (284)
T 2vgo_A 135 VIHRDIKPENLLMGYKGELKIADFGWSVHAPSL----------------------------------------------- 167 (284)
T ss_dssp EECCCCSGGGEEECTTCCEEECCCTTCEECSSS-----------------------------------------------
T ss_pred ceecCCCHHHEEEcCCCCEEEecccccccCccc-----------------------------------------------
Confidence 999999999999999999999998876321100
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......||+.|+|||++.+..++.++|||||||++
T Consensus 168 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 202 (284)
T 2vgo_A 168 ---------------------------------------------RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLC 202 (284)
T ss_dssp ---------------------------------------------CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHH
T ss_pred ---------------------------------------------ccccccCCCCcCCHHHhccCCCCcccchhhHHHHH
Confidence 00113679999999999998899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|+|++ ||....... ....+..... .++... +...+||.+||+.||.+|||+.++++||||+..
T Consensus 203 ~~l~~g~~pf~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h~~~~~~ 269 (284)
T 2vgo_A 203 YEFLVGMPPFDSPSHTE-THRRIVNVDL--KFPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKAN 269 (284)
T ss_dssp HHHHHSSCTTCCSSHHH-HHHHHHTTCC--CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTCHHHHHH
T ss_pred HHHHHCCCCCCCCCHhH-HHHHHhcccc--CCCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhhCHHHHhh
Confidence 99999 666554432 2333332221 122223 344599999999999999999999999999864
No 124
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=4.3e-33 Score=317.73 Aligned_cols=208 Identities=17% Similarity=0.219 Sum_probs=164.7
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC---CCCCCHHHHHHHHHHHHHHHHHHHH
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---KRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~---~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
..+|..+|.+++||||+++++ ++++.. .+|+|||| .|++|.++|... ...+++..++.|+.||+.||.|||+
T Consensus 232 ~~~E~~iL~~l~hp~Iv~l~~-~~~~~~---~l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~ 307 (543)
T 3c4z_A 232 AMVEKKILAKVHSRFIVSLAY-AFETKT---DLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ 307 (543)
T ss_dssp HHHHHHHHHHCCCTTBCCEEE-EEECSS---EEEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCEeeEEE-EEeeCC---EEEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHH
Confidence 346778999999999999999 555543 57999999 899999999543 3459999999999999999999999
Q ss_pred CCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCC
Q 004989 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||+||||||+|||++.+|++||+|||++........
T Consensus 308 ~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~~------------------------------------------- 344 (543)
T 3c4z_A 308 RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT------------------------------------------- 344 (543)
T ss_dssp TTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCC-------------------------------------------
T ss_pred cCCcccCCChHHEEEeCCCCEEEeecceeeeccCCCc-------------------------------------------
Confidence 9999999999999999999999999998843211100
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhc
Q 004989 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
.....+||+.|+|||++.+..|+.++|||||||
T Consensus 345 -----------------------------------------------~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGv 377 (543)
T 3c4z_A 345 -----------------------------------------------KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGV 377 (543)
T ss_dssp -----------------------------------------------CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHH
T ss_pred -----------------------------------------------ccccccCCccccChhhhcCCCCChHHhcCcchH
Confidence 001147899999999999988999999999999
Q ss_pred hhhhccc---cCCCCc---hHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCC-----hHHHHcCcccCCC
Q 004989 300 LLFELFC---PFSTGE---EKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEP 367 (720)
Q Consensus 300 ll~eLlt---pf~~~~---~~~~~~~~l~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpt-----a~eiL~hp~~~~~ 367 (720)
++|||++ ||.... ........+..... .++..+ +...+||.+||++||.+||+ +.+|++||||+..
T Consensus 378 ilyelltG~~PF~~~~~~~~~~~~~~~i~~~~~--~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~Hpff~~i 455 (543)
T 3c4z_A 378 TLYEMIAARGPFRARGEKVENKELKQRVLEQAV--TYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDI 455 (543)
T ss_dssp HHHHHHHSSCSSCCTTCCCCHHHHHHHHHHCCC--CCCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTSGGGTTC
T ss_pred HHHHHHhCCCCCCCCccchhHHHHHHHHhhccc--CCCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHcCccccCC
Confidence 9999999 676542 22333433333221 122233 44559999999999999995 5899999999986
No 125
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=4.8e-33 Score=301.35 Aligned_cols=217 Identities=15% Similarity=0.142 Sum_probs=160.9
Q ss_pred hchhhhhhcccCCCCCceecccceeecCC---CCCcEEEEEecCCCCHHHHHh---CCCCCCCHHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEA---AIDPFVHAIEWGDVSLRQWLD---KPKRSVDVYECLHIFRQIVEIVYA 136 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~---~~~~~~lv~E~~ggsL~~~L~---~~~~~l~~~~~~~i~~QIl~aL~y 136 (720)
+...+...+..++||||+++++.+..... ....+++||||.+++|.+.+. .....+++..++.++.||+.||.|
T Consensus 65 ~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~ 144 (360)
T 3e3p_A 65 RELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGC 144 (360)
T ss_dssp HHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCEEEEEEEECCSCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCcccHHHhhhccccccccceeEEEEeecccccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHH
Confidence 34456667788899999999994443222 222478999996678776663 345568999999999999999999
Q ss_pred HH--HCCceeccCCCCcEEEcc-CCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccc
Q 004989 137 AH--SQGIVVHNVRPSCFVMSS-FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLV 213 (720)
Q Consensus 137 LH--s~gIvHrDLKP~NILl~~-~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla 213 (720)
|| ++||+||||||+|||++. ++.+||+|||++.......
T Consensus 145 lH~~~~~ivH~Dlkp~NIll~~~~~~~kl~Dfg~a~~~~~~~-------------------------------------- 186 (360)
T 3e3p_A 145 LHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSE-------------------------------------- 186 (360)
T ss_dssp HTSTTTCCBCSCCCGGGEEEETTTTEEEECCCTTCBCCCTTS--------------------------------------
T ss_pred HhCCCCCeecCcCCHHHEEEeCCCCcEEEeeCCCceecCCCC--------------------------------------
Confidence 99 999999999999999996 8999999998874332110
Q ss_pred cCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC-CCccc
Q 004989 214 TAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCAS 292 (720)
Q Consensus 214 ~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~s 292 (720)
......||+.|+|||++.+.. ++.++
T Consensus 187 -----------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~ 213 (360)
T 3e3p_A 187 -----------------------------------------------------PNVAYICSRYYRAPELIFGNQHYTTAV 213 (360)
T ss_dssp -----------------------------------------------------CCCSTTSCGGGCCHHHHTTCSSCCTHH
T ss_pred -----------------------------------------------------CcccccCCcceeCHHHHcCCCCCCcHH
Confidence 001146799999999997665 89999
Q ss_pred cchhhhchhhhccc---cCCCCchHHHHHHHhhcCCCCc-c-----------------------------ccccCchHHH
Q 004989 293 DIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPP-Q-----------------------------LLLKFPKEAS 339 (720)
Q Consensus 293 DIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~-~-----------------------------~~~~~p~~~~ 339 (720)
|||||||++|||++ ||............+.....++ . .....+...+
T Consensus 214 Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (360)
T 3e3p_A 214 DIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYD 293 (360)
T ss_dssp HHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHH
Confidence 99999999999999 6766554433322222111110 0 0001234559
Q ss_pred HHHHcCCCCCCCCCChHHHHcCcccCCCccc
Q 004989 340 FCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 340 Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
||.+||++||.+|||+.|+|+||||+....+
T Consensus 294 li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~~ 324 (360)
T 3e3p_A 294 LLSALLQYLPEERMKPYEALCHPYFDELHDP 324 (360)
T ss_dssp HHHHHTCSSGGGSCCHHHHTTSGGGGGGGCT
T ss_pred HHHHHhccCccccCCHHHHhcCccccccCCc
Confidence 9999999999999999999999999987543
No 126
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=2.6e-33 Score=302.68 Aligned_cols=207 Identities=17% Similarity=0.205 Sum_probs=160.1
Q ss_pred hhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 66 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
+|..+|.++ +||||+++++ +++++. .+|+|||| .|++|.+++.+.+ .+++.+++.++.||+.||.|||++||+
T Consensus 64 ~E~~~l~~~~~hp~iv~~~~-~~~~~~---~~~lv~E~~~gg~L~~~i~~~~-~~~~~~~~~~~~qi~~al~~lH~~giv 138 (342)
T 2qr7_A 64 EEIEILLRYGQHPNIITLKD-VYDDGK---YVYVVTELMKGGELLDKILRQK-FFSEREASAVLFTITKTVEYLHAQGVV 138 (342)
T ss_dssp HHHHHHHHHTTSTTBCCEEE-EEECSS---EEEEEECCCCSCBHHHHHHTCT-TCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHhcCCCCcCeEEE-EEEcCC---EEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCcE
Confidence 455566665 7999999999 565543 68999999 8999999996544 499999999999999999999999999
Q ss_pred eccCCCCcEEEccC----CceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCC
Q 004989 144 VHNVRPSCFVMSSF----NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 144 HrDLKP~NILl~~~----~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
||||||+|||+... +.+||+|||++....... .
T Consensus 139 HrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~---------------------------------~---------- 175 (342)
T 2qr7_A 139 HRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN---------------------------------G---------- 175 (342)
T ss_dssp CSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTT---------------------------------C----------
T ss_pred eccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCC---------------------------------C----------
Confidence 99999999998543 349999888874321110 0
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhc
Q 004989 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
.....+||+.|+|||++.+..|+.++|||||||
T Consensus 176 -----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~ 208 (342)
T 2qr7_A 176 -----------------------------------------------LLMTPCYTANFVAPEVLERQGYDAACDIWSLGV 208 (342)
T ss_dssp -----------------------------------------------CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------------------ceeccCCCccccCHHHhcCCCCCCccCeeeHhH
Confidence 001146899999999998877999999999999
Q ss_pred hhhhccc---cCCCC--chHHHHHHHhhcCCCC--ccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 300 LLFELFC---PFSTG--EEKTRTMSSLRHRVLP--PQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 300 ll~eLlt---pf~~~--~~~~~~~~~l~~~~~p--~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
++|||++ ||... ......+..+..+.++ ...+...+ ...+||.+||++||.+|||+.++|+||||...
T Consensus 209 il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~hp~~~~~ 284 (342)
T 2qr7_A 209 LLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVHW 284 (342)
T ss_dssp HHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCCCCCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHTG
T ss_pred HHHHHhcCCCCCCCCCcCCHHHHHHHHccCCcccCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCCeecCc
Confidence 9999999 66542 2333455555544332 22333344 44599999999999999999999999999653
No 127
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=5e-33 Score=293.24 Aligned_cols=216 Identities=15% Similarity=0.206 Sum_probs=155.5
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-------CCCCCCHHHHHHHHHHHHHHHH
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-------PKRSVDVYECLHIFRQIVEIVY 135 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-------~~~~l~~~~~~~i~~QIl~aL~ 135 (720)
..+|..++.+++||||+++++ ++.... .+++|||| .|++|.+++.. ....+++..++.++.||+.||.
T Consensus 60 ~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~ 135 (303)
T 2vwi_A 60 LLKEIQAMSQCHHPNIVSYYT-SFVVKD---ELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLE 135 (303)
T ss_dssp ------CCCCCCCTTBCCEEE-EEESSS---CEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhcCCCCEeeEEE-EEeecC---CcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHH
Confidence 347788999999999999999 554443 57999999 79999999952 3445899999999999999999
Q ss_pred HHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccC
Q 004989 136 AAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 215 (720)
Q Consensus 136 yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~ 215 (720)
|||++||+||||||+||+++.++.++|+|||.+....... ++.
T Consensus 136 ~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~---------------------------------~~~---- 178 (303)
T 2vwi_A 136 YLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGG---------------------------------DIT---- 178 (303)
T ss_dssp HHHHTTCCCCCCSGGGEEECTTCCEEECCCHHHHHCC-------------------------------------------
T ss_pred HHHhCCCCCCCCChhhEEEcCCCCEEEEeccchheeccCC---------------------------------Ccc----
Confidence 9999999999999999999999999999998874321110 000
Q ss_pred CCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC-CCCCccccc
Q 004989 216 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDI 294 (720)
Q Consensus 216 ~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sDI 294 (720)
.........||+.|+|||++.+ ..++.++||
T Consensus 179 ------------------------------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di 210 (303)
T 2vwi_A 179 ------------------------------------------------RNKVRKTFVGTPCWMAPEVMEQVRGYDFKADI 210 (303)
T ss_dssp ---------------------------------------------------------CCCTTCCHHHHHHHHCCCTHHHH
T ss_pred ------------------------------------------------chhhhcccCCCccccCHHHhccccCCCchhhH
Confidence 0000011468999999999976 458999999
Q ss_pred hhhhchhhhccc---cCCCCchHHHHHHHhhcCCC-------CccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcc
Q 004989 295 YRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVL-------PPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEF 363 (720)
Q Consensus 295 wSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~-------p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~ 363 (720)
|||||++|||++ ||............+..... .+.....++ ...+|+.+||+.||.+|||+.++++|||
T Consensus 211 ~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~ 290 (303)
T 2vwi_A 211 WSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKF 290 (303)
T ss_dssp HHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCCTTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTSTT
T ss_pred HHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCCccccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhChh
Confidence 999999999999 67665444333333332211 111222333 3459999999999999999999999999
Q ss_pred cCCCc
Q 004989 364 LNEPR 368 (720)
Q Consensus 364 ~~~~~ 368 (720)
|+...
T Consensus 291 ~~~~~ 295 (303)
T 2vwi_A 291 FQKAK 295 (303)
T ss_dssp C----
T ss_pred hhcCC
Confidence 98763
No 128
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=99.98 E-value=1.3e-32 Score=292.29 Aligned_cols=212 Identities=13% Similarity=0.163 Sum_probs=166.1
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++.+++||||+++++ ++.... .+|++||| .+++|.+++......+++..++.++.||+.||.|||++||
T Consensus 71 ~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i 146 (314)
T 3com_A 71 IIKEISIMQQCDSPHVVKYYG-SYFKNT---DLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRK 146 (314)
T ss_dssp HHHHHHHHHTCCCTTBCCEEE-EEEETT---EEEEEEECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHhCCCCCCccEEE-EEEeCC---EEEEEeecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCC
Confidence 346788999999999999999 444432 57999999 7889999996445569999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+|+||||+||+++.++.++|+|||.+........
T Consensus 147 ~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~---------------------------------------------- 180 (314)
T 3com_A 147 IHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMA---------------------------------------------- 180 (314)
T ss_dssp ECCCCSGGGEEECTTCCEEECCCTTCEECBTTBS----------------------------------------------
T ss_pred cCCCcCHHHEEECCCCCEEEeecccchhhhhhcc----------------------------------------------
Confidence 9999999999999999999999988743211100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......||+.|+|||++.+..++.++|||||||++|
T Consensus 181 --------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ 216 (314)
T 3com_A 181 --------------------------------------------KRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAI 216 (314)
T ss_dssp --------------------------------------------CBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHH
T ss_pred --------------------------------------------ccCccCCCCCccChhhcCCCCCCccccHHHHHHHHH
Confidence 001136899999999999888999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004989 303 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
+|++ ||.........................++ ...+||.+||..||.+|||+.++|+||||+....
T Consensus 217 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~~~~~~~~~ 287 (314)
T 3com_A 217 EMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQHPFVRSAKG 287 (314)
T ss_dssp HHHHSSCTTTTSCHHHHHHHHHHSCCCCCSSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHTCCC
T ss_pred HHHhCCCCCCCCChHHHHHHHhcCCCcccCCcccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhcCCc
Confidence 9999 66655444332222222211111223334 4459999999999999999999999999998744
No 129
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=99.98 E-value=3.9e-33 Score=310.84 Aligned_cols=212 Identities=15% Similarity=0.177 Sum_probs=153.4
Q ss_pred chhhhhhcccC-CCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..+|.++ +|||||++++ ++.+.. .+|+||||.+++|.+++......+.+.+++.++.||+.||.|||++||
T Consensus 64 ~~~E~~~l~~l~~HpnIv~l~~-~~~~~~---~~~lv~E~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i 139 (432)
T 3p23_A 64 ADREVQLLRESDEHPNVIRYFC-TEKDRQ---FQYIAIELCAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNI 139 (432)
T ss_dssp CHHHHHHHHHSCCCTTBCCEEE-EEEETT---EEEEEEECCSEEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhccCCCCcCeEEE-EEecCC---EEEEEEECCCCCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHCcC
Confidence 34777888888 7999999999 555443 579999997789999997666557777788999999999999999999
Q ss_pred eeccCCCCcEEEccC-----CceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCC
Q 004989 143 VVHNVRPSCFVMSSF-----NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 143 vHrDLKP~NILl~~~-----~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~ 217 (720)
+||||||+|||++.+ ..+||+|||++........ .+
T Consensus 140 vHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~--------------------------------~~------- 180 (432)
T 3p23_A 140 VHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRH--------------------------------SF------- 180 (432)
T ss_dssp CCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC----------------------------------------------
T ss_pred EeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCc--------------------------------ce-------
Confidence 999999999999532 3577988887743311100 00
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC---CCCCccccc
Q 004989 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG---APVSCASDI 294 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~---~~~s~~sDI 294 (720)
.......||++|+|||++.+ ..++.++||
T Consensus 181 ------------------------------------------------~~~~~~~gt~~y~APE~l~~~~~~~~t~~~Di 212 (432)
T 3p23_A 181 ------------------------------------------------SRRSGVPGTEGWIAPEMLSEDCKENPTYTVDI 212 (432)
T ss_dssp -----------------------------------------------------CCSCTTSCCGGGTSCC---CCCTHHHH
T ss_pred ------------------------------------------------eeccccCCCcCccChhhhhcccccCCCcHHHH
Confidence 00011478999999999974 447889999
Q ss_pred hhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCcccc-c-cCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 295 YRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLL-L-KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 295 wSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~-~-~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|||||++|||++ ||...... .....+.....+.... . ..+...+||.+||+.||.+|||+.++|+||||...
T Consensus 213 wSlG~il~ellt~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~hp~f~~~ 290 (432)
T 3p23_A 213 FSAGCVFYYVISEGSHPFGKSLQR-QANILLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFFWSL 290 (432)
T ss_dssp HHHHHHHHHHHTTSCBTTBSTTTH-HHHHHTTCCCCTTSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTSTTTCCH
T ss_pred HHHHHHHHHHHcCCCCCcchhhHH-HHHHHhccCCccccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHhCccccCh
Confidence 999999999998 45433222 1111222211111111 1 11224599999999999999999999999999875
No 130
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=99.98 E-value=6.1e-33 Score=293.78 Aligned_cols=206 Identities=17% Similarity=0.238 Sum_probs=164.1
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++.+++||||+++++ ++.+.. .+|++||| .|++|.+++...+ .+++..++.++.||+.||.|||++||
T Consensus 53 ~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i 127 (304)
T 2jam_A 53 LENEIAVLKKIKHENIVTLED-IYESTT---HYYLVMQLVSGGELFDRILERG-VYTEKDASLVIQQVLSAVKYLHENGI 127 (304)
T ss_dssp HHHHHHHHHHCCCTTBCCEEE-EEECSS---EEEEEECCCCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhCCCCCeeehhh-hcccCC---EEEEEEEcCCCccHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 347788999999999999999 555543 67999999 7899999995443 49999999999999999999999999
Q ss_pred eeccCCCCcEEE---ccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCC
Q 004989 143 VVHNVRPSCFVM---SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 143 vHrDLKP~NILl---~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||||||+||++ +.++.++|+|||.+......
T Consensus 128 ~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~--------------------------------------------- 162 (304)
T 2jam_A 128 VHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG--------------------------------------------- 162 (304)
T ss_dssp CCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCB---------------------------------------------
T ss_pred cccCCCHHHEEEecCCCCCCEEEccCCcceecCCC---------------------------------------------
Confidence 999999999999 67889999888876321100
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhc
Q 004989 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
......||+.|+|||++.+..++.++|||||||
T Consensus 163 -----------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ 195 (304)
T 2jam_A 163 -----------------------------------------------IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGV 195 (304)
T ss_dssp -----------------------------------------------TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHH
T ss_pred -----------------------------------------------ccccccCCCCccChHHhccCCCCchhhHHHHHH
Confidence 000136799999999999988999999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcCCC--CccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 300 LLFELFC---PFSTGEEKTRTMSSLRHRVL--PPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~~~~--p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
++|+|++ ||...... .....+..... +.......+ ...+||.+||.+||.+|||+.|+|+||||...
T Consensus 196 il~~l~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~ 268 (304)
T 2jam_A 196 ITYILLCGYPPFYEETES-KLFEKIKEGYYEFESPFWDDISESAKDFICHLLEKDPNERYTCEKALSHPWIDGN 268 (304)
T ss_dssp HHHHHHHSSCTTTTSCHH-HHHHHHHHCCCCCCTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHSS
T ss_pred HHHHHHHCCCCCCCCCHH-HHHHHHHcCCCCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCccccCC
Confidence 9999999 66554443 33444444322 223333344 45599999999999999999999999999875
No 131
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=99.98 E-value=1.1e-32 Score=300.33 Aligned_cols=205 Identities=18% Similarity=0.206 Sum_probs=161.0
Q ss_pred hhhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 65 HSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
.+|..++.++ +||||+++++ ++.... ..|+|||| .|++|.+++... ..+++..++.++.||+.||.|||+.||
T Consensus 147 ~~E~~~l~~l~~hp~iv~~~~-~~~~~~---~~~lv~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~L~~LH~~gi 221 (365)
T 2y7j_A 147 RRETHILRQVAGHPHIITLID-SYESSS---FMFLVFDLMRKGELFDYLTEK-VALSEKETRSIMRSLLEAVSFLHANNI 221 (365)
T ss_dssp HHHHHHHHHHTTCTTBCCEEE-EEEBSS---EEEEEECCCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHhcCCCCEeEEEE-EEeeCC---EEEEEEEeCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 3677788888 8999999999 555443 68999999 889999999543 349999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.++|+|||++.......
T Consensus 222 ~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~~~~~----------------------------------------------- 254 (365)
T 2y7j_A 222 VHRDLKPENILLDDNMQIRLSDFGFSCHLEPGE----------------------------------------------- 254 (365)
T ss_dssp ECSCCSGGGEEECTTCCEEECCCTTCEECCTTC-----------------------------------------------
T ss_pred ecCCCCHHHEEECCCCCEEEEecCcccccCCCc-----------------------------------------------
Confidence 999999999999999999999998873321100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC------CCCCccccchh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG------APVSCASDIYR 296 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~------~~~s~~sDIwS 296 (720)
......||+.|+|||++.+ ..++.++||||
T Consensus 255 --------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~s 290 (365)
T 2y7j_A 255 --------------------------------------------KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWA 290 (365)
T ss_dssp --------------------------------------------CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHH
T ss_pred --------------------------------------------ccccCCCCCCccChhhccccccccCcCCCchhhHHh
Confidence 0011468999999999863 34889999999
Q ss_pred hhchhhhccc---cCCCCchHHHHHHHhhcCCCCc---cccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCC
Q 004989 297 LGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPP---QLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 366 (720)
Q Consensus 297 LGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~---~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~ 366 (720)
|||++|||++ ||...... .....+....... .+....+...+||.+||+.||.+|||+.++|+||||+.
T Consensus 291 lG~il~ell~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~f~r 365 (365)
T 2y7j_A 291 CGVILFTLLAGSPPFWHRRQI-LMLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHPFFER 365 (365)
T ss_dssp HHHHHHHHHHSSCSSCCSSHH-HHHHHHHHTCCCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCC
T ss_pred HHHHHHHHHHCCCCCCCCCHH-HHHHHHHhCCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCcccCC
Confidence 9999999999 66654443 3333343333221 12233344569999999999999999999999999973
No 132
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=99.98 E-value=6e-33 Score=290.11 Aligned_cols=208 Identities=17% Similarity=0.263 Sum_probs=163.5
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++.+++||||+++++ ++.... .++++||| .+++|.+++... ..+++.+++.++.||+.||.|||++|
T Consensus 54 ~~~~E~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~ 128 (283)
T 3bhy_A 54 EIEREVNILREIRHPNIITLHD-IFENKT---DVVLILELVSGGELFDFLAEK-ESLTEDEATQFLKQILDGVHYLHSKR 128 (283)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EEECSS---EEEEEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCeeehhh-eecCCC---eEEEEEeecCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3447888999999999999999 555443 57999999 789999999543 34999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCC----ceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCC
Q 004989 142 IVVHNVRPSCFVMSSFN----HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~----~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~ 217 (720)
|+||||||+||+++.++ .++|+|||.+.......
T Consensus 129 i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~~~~~------------------------------------------ 166 (283)
T 3bhy_A 129 IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGN------------------------------------------ 166 (283)
T ss_dssp EECSCCSGGGEEESCSSSSSCCEEECCCTTCEECC---------------------------------------------
T ss_pred ccCCCCChHHEEEecCCCCCCceEEEecccceeccCCC------------------------------------------
Confidence 99999999999998777 79999888773321100
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhh
Q 004989 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRL 297 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSL 297 (720)
......||+.|+|||++.+..++.++|||||
T Consensus 167 -------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl 197 (283)
T 3bhy_A 167 -------------------------------------------------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSI 197 (283)
T ss_dssp ------------------------------------------------------CCCGGGCCHHHHTTCCCCTHHHHHHH
T ss_pred -------------------------------------------------cccccCCCcCccCcceecCCCCCcchhhhhH
Confidence 0011367999999999998889999999999
Q ss_pred hchhhhccc---cCCCCchHHHHHHHhhcCC--CCccccccCch-HHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 298 GVLLFELFC---PFSTGEEKTRTMSSLRHRV--LPPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 298 Gvll~eLlt---pf~~~~~~~~~~~~l~~~~--~p~~~~~~~p~-~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
||++|+|++ ||...... .....+.... .++......+. ..+|+.+||..||.+|||+.++|+||||+..
T Consensus 198 G~il~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~ 272 (283)
T 3bhy_A 198 GVITYILLSGASPFLGETKQ-ETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAI 272 (283)
T ss_dssp HHHHHHHHHSSCTTCCSSHH-HHHHHHHTTCCCCCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHH
T ss_pred HHHHHHHHHCCCCCCCcchH-HHHHHhHhcccCCcchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHH
Confidence 999999999 66655443 3333333322 23333334444 4599999999999999999999999999875
No 133
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=99.98 E-value=9.6e-33 Score=291.94 Aligned_cols=207 Identities=19% Similarity=0.250 Sum_probs=164.4
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++.+++||||+++++ ++.... .+|+|||| .+++|.+++.. ..+++..++.++.||+.||.|||++|
T Consensus 66 ~~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~ 139 (303)
T 3a7i_A 66 DIQQEITVLSQCDSPYVTKYYG-SYLKDT---KLWIIMEYLGGGSALDLLEP--GPLDETQIATILREILKGLDYLHSEK 139 (303)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EEEETT---EEEEEEECCTTEEHHHHHTT--SCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCEeEEEE-EEecCC---eEEEEEEeCCCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 4457788999999999999999 554433 57999999 78899999954 34999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.++|+|||.+........
T Consensus 140 i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~--------------------------------------------- 174 (303)
T 3a7i_A 140 KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI--------------------------------------------- 174 (303)
T ss_dssp EECCCCSGGGEEECTTSCEEECCCTTCEECBTTBC---------------------------------------------
T ss_pred CccCCCChheEEECCCCCEEEeecccceecCcccc---------------------------------------------
Confidence 99999999999999999999999988743211100
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......||+.|+|||++.+..++.++|||||||++
T Consensus 175 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 209 (303)
T 3a7i_A 175 ---------------------------------------------KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITA 209 (303)
T ss_dssp ---------------------------------------------CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHH
T ss_pred ---------------------------------------------ccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHH
Confidence 00114689999999999998899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccccCch-HHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~-~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|+|++ ||...... .....+..... +.+...++. ..+|+.+||++||.+|||+.++++||||...
T Consensus 210 ~~l~~g~~p~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~ 277 (303)
T 3a7i_A 210 IELARGEPPHSELHPM-KVLFLIPKNNP-PTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRN 277 (303)
T ss_dssp HHHHHSSCTTTTSCHH-HHHHHHHHSCC-CCCCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTCHHHHHH
T ss_pred HHHccCCCCCCCcCHH-HHHHHhhcCCC-CCCccccCHHHHHHHHHHcCCChhhCcCHHHHhhChhhhcC
Confidence 99999 56554433 22333333322 233334444 4599999999999999999999999999764
No 134
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=99.98 E-value=3.3e-33 Score=298.44 Aligned_cols=208 Identities=21% Similarity=0.247 Sum_probs=160.4
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++||||+++++ ++... .+|+|||| .+++|.+++... ..+++..++.++.||+.||.|||++|
T Consensus 61 ~~~~E~~~l~~l~h~~i~~~~~-~~~~~----~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ 134 (322)
T 2ycf_A 61 NVETEIEILKKLNHPCIIKIKN-FFDAE----DYYIVLELMEGGELFDKVVGN-KRLKEATCKLYFYQMLLAVQYLHENG 134 (322)
T ss_dssp CHHHHHHHHHHCCCTTBCCEEE-EEESS----SEEEEEECCTTEETHHHHSTT-CCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHhCCCCCCceEee-EEcCC----ceEEEEecCCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 4457888999999999999999 55544 37999999 788999999543 45999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCc---eEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCC
Q 004989 142 IVVHNVRPSCFVMSSFNH---VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~---vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
|+||||||+|||++.++. +||+|||.+...+...
T Consensus 135 ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~------------------------------------------- 171 (322)
T 2ycf_A 135 IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS------------------------------------------- 171 (322)
T ss_dssp EECCCCSGGGEEESSSSSSCCEEECCCTTCEECCCCH-------------------------------------------
T ss_pred eeccCCCHHHEEEecCCCCCeEEEccCccceeccccc-------------------------------------------
Confidence 999999999999987664 9999888874321110
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCccccc---CCCCCccccch
Q 004989 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA---GAPVSCASDIY 295 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~---~~~~s~~sDIw 295 (720)
......||+.|+|||++. ...++.++|||
T Consensus 172 ------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~ 203 (322)
T 2ycf_A 172 ------------------------------------------------LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCW 203 (322)
T ss_dssp ------------------------------------------------HHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHH
T ss_pred ------------------------------------------------ccccccCCcCccCchhhccCCCCCCCchhhHH
Confidence 000136899999999974 45589999999
Q ss_pred hhhchhhhccc---cCCCCchHHHHHHHhhcCC--CCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 296 RLGVLLFELFC---PFSTGEEKTRTMSSLRHRV--LPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 296 SLGvll~eLlt---pf~~~~~~~~~~~~l~~~~--~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
||||++|+|++ ||............+.... +.+...... +...+||.+||+.||.+|||+.++|+||||...
T Consensus 204 slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h~~~~~~ 281 (322)
T 2ycf_A 204 SLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDE 281 (322)
T ss_dssp HHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGCCH
T ss_pred HHHHHHHHHHhCCCCCcccchHHHHHHHHHhCccccCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhhCcCcCCH
Confidence 99999999999 6654332212222233222 223333333 444599999999999999999999999999864
No 135
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=99.98 E-value=4.1e-33 Score=290.34 Aligned_cols=207 Identities=18% Similarity=0.271 Sum_probs=157.8
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++..++||||+++++ ++.... .+|++||| .+++|.+++.... .+++..++.++.||+.||.|||++|
T Consensus 57 ~~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~ 131 (276)
T 2h6d_A 57 KIKREIQNLKLFRHPHIIKLYQ-VISTPT---DFFMVMEYVSGGELFDYICKHG-RVEEMEARRLFQQILSAVDYCHRHM 131 (276)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEE-EEECSS---EEEEEEECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhcCCCCCEeEEEE-EEecCC---eEEEEEeccCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3447788899999999999999 554443 67999999 7899999995543 4899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.++|+|||.+.......
T Consensus 132 i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~---------------------------------------------- 165 (276)
T 2h6d_A 132 VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE---------------------------------------------- 165 (276)
T ss_dssp SSCCCCCGGGEEECTTSCEEECCCCGGGCCCC------------------------------------------------
T ss_pred CccCCCChhhEEECCCCCEEEeecccccccCCCc----------------------------------------------
Confidence 9999999999999999999999998874321110
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCC-Cccccchhhhch
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYRLGVL 300 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~-s~~sDIwSLGvl 300 (720)
......||+.|+|||++.+..+ +.++|||||||+
T Consensus 166 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~ 200 (276)
T 2h6d_A 166 ---------------------------------------------FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVI 200 (276)
T ss_dssp --------------------------------------------------------CCTGGGTTSCCCHHHHHHHHHHHH
T ss_pred ---------------------------------------------ceecccCCccccCHHHHcCCCCCCccchHHHHHHH
Confidence 0001367999999999988765 689999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCcccccc-CchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004989 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLK-FPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~-~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
+|+|++ ||...... .....+.....+ ++.. .+...+|+.+||+.||.+|||+.++++||||+...
T Consensus 201 l~~l~~g~~p~~~~~~~-~~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h~~~~~~~ 269 (276)
T 2h6d_A 201 LYALLCGTLPFDDEHVP-TLFKKIRGGVFY--IPEYLNRSVATLLMHMLQVDPLKRATIKDIREHEWFKQDL 269 (276)
T ss_dssp HHHHHHSSCSSCCSSHH-HHHHHHHHCCCC--CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHTTC
T ss_pred HHHHHhCCCCCCCCcHH-HHHHHhhcCccc--CchhcCHHHHHHHHHHccCChhhCCCHHHHHhChhhccCc
Confidence 999999 66654333 344444443321 1122 24456999999999999999999999999998753
No 136
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=99.98 E-value=1.6e-32 Score=291.83 Aligned_cols=208 Identities=16% Similarity=0.226 Sum_probs=162.6
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++||||+++++ ++..+ .+++|||| .|++|.+++......+++.+++.|+.||+.||.|||++|
T Consensus 78 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ 152 (307)
T 3lb7_A 78 AFRNEVAVLRKTRHVNILLFMG-YMTKD----NLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKN 152 (307)
T ss_dssp HHHHHHHHHTTCCCTTBCCEEE-EECSS----SCEEEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCEEEEEE-EEccC----cEEEEEecCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 4447888999999999999999 55433 36899999 899999999766667999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||++.........
T Consensus 153 ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~~-------------------------------------------- 188 (307)
T 3lb7_A 153 IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGS-------------------------------------------- 188 (307)
T ss_dssp CCCSCCCSSSEEECTTSCEEECCCCSSCC---------------------------------------------------
T ss_pred EeeCCCChhhEEEcCCCCEEEccCCCceeccccccc--------------------------------------------
Confidence 999999999999999999999999987432110000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCccccc---CCCCCccccchhhh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA---GAPVSCASDIYRLG 298 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~---~~~~s~~sDIwSLG 298 (720)
.......||+.|+|||++. +..++.++||||||
T Consensus 189 --------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG 224 (307)
T 3lb7_A 189 --------------------------------------------QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYG 224 (307)
T ss_dssp -------------------------------------------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHH
T ss_pred --------------------------------------------ccccCCCCCcceECcceeeccCCCCCCchhhHHHHH
Confidence 0001146899999999996 55589999999999
Q ss_pred chhhhccc---cCCCCchHHHHHHHhhcCCCCcc---ccccCch-HHHHHHHcCCCCCCCCCChHHHHcCcc
Q 004989 299 VLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQ---LLLKFPK-EASFCLWLLHPEPSGRPKMGELLQSEF 363 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~---~~~~~p~-~~~Li~~~L~~dP~~Rpta~eiL~hp~ 363 (720)
|++|||++ ||............+.....++. +...+|+ ..+|+.+||+.||.+||++.+++++.+
T Consensus 225 ~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~ 296 (307)
T 3lb7_A 225 IVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIE 296 (307)
T ss_dssp HHHHHHHHSSCTTTTCCCHHHHHHHHHHTCCCCCSTTSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHH
T ss_pred HHHHHHHhCCCCCccCCcHHHHHHHHhcCCCCcchhhhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHH
Confidence 99999999 77766555444444444433332 2234444 459999999999999999999998543
No 137
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=99.98 E-value=9.7e-33 Score=290.59 Aligned_cols=207 Identities=20% Similarity=0.263 Sum_probs=164.3
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++..++||||+++++ ++.+.. .++++||| .+++|.+++.... .+++.+++.++.||+.||.|||++|
T Consensus 61 ~~~~e~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~ 135 (294)
T 2rku_A 61 KMSMEISIHRSLAHQHVVGFHG-FFEDND---FVFVVLELCRRRSLLELHKRRK-ALTEPEARYYLRQIVLGCQYLHRNR 135 (294)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEE-EEECSS---EEEEEEECCTTCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCEeeeee-eeccCC---EEEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3447888999999999999999 555443 57999999 8899999985433 4999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.++|+|||.+........
T Consensus 136 i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~--------------------------------------------- 170 (294)
T 2rku_A 136 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE--------------------------------------------- 170 (294)
T ss_dssp EECCCCCGGGEEECTTCCEEECCCTTCEECCSTTC---------------------------------------------
T ss_pred ccccCCChHhEEEcCCCCEEEEeccCceecccCcc---------------------------------------------
Confidence 99999999999999999999999988743211100
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......||+.|+|||++.+..++.++|||||||++
T Consensus 171 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l 205 (294)
T 2rku_A 171 ---------------------------------------------RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIM 205 (294)
T ss_dssp ---------------------------------------------CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHH
T ss_pred ---------------------------------------------ccccccCCCCcCCcchhccCCCCchhhHHHHHHHH
Confidence 00114689999999999988899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|+|++ ||...... .....+.....+ +.... +...+|+.+||+.||.+|||+.|+++||||...
T Consensus 206 ~~l~~g~~p~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~~~~~~~ 272 (294)
T 2rku_A 206 YTLLVGKPPFETSCLK-ETYLRIKKNEYS--IPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSG 272 (294)
T ss_dssp HHHHHSSCTTCCSSHH-HHHHHHHTTCCC--CCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHTS
T ss_pred HHHHhCCCCCCCCCHH-HHHHHHhhccCC--CccccCHHHHHHHHHHcccChhhCcCHHHHhhChheecC
Confidence 99999 66654443 233333332221 11223 445699999999999999999999999999865
No 138
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=99.98 E-value=5.4e-33 Score=295.43 Aligned_cols=216 Identities=18% Similarity=0.267 Sum_probs=160.0
Q ss_pred hchhhhhhcccCC--CCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 63 RKHSDGVELTHGD--HLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~L~~l~--HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+..+|..+|.++. ||||+++++ ++.... .+|++||+.+++|.+++.... .+++.+++.++.||+.||.|||++
T Consensus 72 ~~~~E~~~l~~l~~~~~~iv~~~~-~~~~~~---~~~lv~e~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~ 146 (313)
T 3cek_A 72 SYRNEIAYLNKLQQHSDKIIRLYD-YEITDQ---YIYMVMECGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQH 146 (313)
T ss_dssp HHHHHHHHHHHHGGGCTTBCCEEE-EEECSS---EEEEEECCCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhccccCCceEEEEE-EeecCC---EEEEEEecCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC
Confidence 4447777888887 599999999 554443 589999999999999996544 589999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+|||++ ++.+||+|||++.........
T Consensus 147 ~ivH~dlkp~NIl~~-~~~~kL~Dfg~~~~~~~~~~~------------------------------------------- 182 (313)
T 3cek_A 147 GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS------------------------------------------- 182 (313)
T ss_dssp TCCCCCCCGGGEEEE-TTEEEECCCSSSCC--------------------------------------------------
T ss_pred CceecCCCcccEEEE-CCeEEEeeccccccccCcccc-------------------------------------------
Confidence 999999999999996 589999999987443211000
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC-----------CCCC
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-----------APVS 289 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-----------~~~s 289 (720)
.......||+.|+|||++.+ ..++
T Consensus 183 ---------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~ 217 (313)
T 3cek_A 183 ---------------------------------------------VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKIS 217 (313)
T ss_dssp ----------------------------------------------------CCGGGCCHHHHTTCC----------CCC
T ss_pred ---------------------------------------------ccccCCCCCCCcCCHHHHhhcccccccccccccCC
Confidence 00011468999999999976 3588
Q ss_pred ccccchhhhchhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccC
Q 004989 290 CASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLN 365 (720)
Q Consensus 290 ~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~ 365 (720)
.++|||||||++|||++ ||.........+..+........+....+ ...+||.+||+.||.+|||+.|+|+||||+
T Consensus 218 ~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~~~ 297 (313)
T 3cek_A 218 PKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 297 (313)
T ss_dssp HHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHH
T ss_pred chHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHhcccccCCcccchHHHHHHHHHHccCCcccCcCHHHHhcCcccc
Confidence 99999999999999999 66655443333333333333333333334 455999999999999999999999999999
Q ss_pred CCccchH
Q 004989 366 EPRDSME 372 (720)
Q Consensus 366 ~~~~~l~ 372 (720)
....+..
T Consensus 298 ~~~~~~~ 304 (313)
T 3cek_A 298 IQTHPVN 304 (313)
T ss_dssp CC-----
T ss_pred CCCCchh
Confidence 8754433
No 139
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=99.98 E-value=1.7e-34 Score=314.96 Aligned_cols=207 Identities=11% Similarity=0.089 Sum_probs=140.3
Q ss_pred hhhcccCCCCCceeccccee------ecCCC--------------CCcEEEEEecCCCCHHHHHhCCCCCCCHHHH----
Q 004989 68 GVELTHGDHLRNQGGLSGVC------ENEAA--------------IDPFVHAIEWGDVSLRQWLDKPKRSVDVYEC---- 123 (720)
Q Consensus 68 ~~~L~~l~HpnIV~l~~~~~------~~~~~--------------~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~---- 123 (720)
..+|.. +||||++++..++ ..... ...+|+||||.+++|.+++...+..+++...
T Consensus 116 ~~~l~~-~hp~iv~~~~~~~~p~d~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~ 194 (371)
T 3q60_A 116 AARLLG-ESPEEARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLDFVYVFRGDEGIL 194 (371)
T ss_dssp HHHHHC-----------CBCCCCEEEEETTSCSSSBCSCC---CCEEEEEEEECCCSEEHHHHHHHHHHSCCCCHHHHHH
T ss_pred HHHhcc-cChhhhhhceeEEeeehheecCCCCCeeeccCCcccceeeeEEEEecCCCCCHHHHHHHhccccchhhhhhhh
Confidence 456666 8999888663222 11111 1347999999669999999654333555555
Q ss_pred --HHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhh
Q 004989 124 --LHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQR 201 (720)
Q Consensus 124 --~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (720)
..++.||+.||.|||++||+||||||+|||++.++.+||+|||++...+..
T Consensus 195 vk~~i~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~--------------------------- 247 (371)
T 3q60_A 195 ALHILTAQLIRLAANLQSKGLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTR--------------------------- 247 (371)
T ss_dssp HHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEECTTSCEEECCGGGEEETTCE---------------------------
T ss_pred hHHHHHHHHHHHHHHHHHCCCccCcCCHHHEEECCCCCEEEEecceeeecCCC---------------------------
Confidence 677799999999999999999999999999999999999988887432110
Q ss_pred hhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcc
Q 004989 202 RTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPE 281 (720)
Q Consensus 202 r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE 281 (720)
.....+|+.|+|||
T Consensus 248 ------------------------------------------------------------------~~~~~~t~~y~aPE 261 (371)
T 3q60_A 248 ------------------------------------------------------------------GPASSVPVTYAPRE 261 (371)
T ss_dssp ------------------------------------------------------------------EEGGGSCGGGCCHH
T ss_pred ------------------------------------------------------------------ccCccCCcCCcChh
Confidence 00135679999999
Q ss_pred cccC--CCCCccccchhhhchhhhccc---cCCCCchHHH-HHHH---hh--c-CCCCccccccCchHHHHHHHcCCCCC
Q 004989 282 ELAG--APVSCASDIYRLGVLLFELFC---PFSTGEEKTR-TMSS---LR--H-RVLPPQLLLKFPKEASFCLWLLHPEP 349 (720)
Q Consensus 282 ~l~~--~~~s~~sDIwSLGvll~eLlt---pf~~~~~~~~-~~~~---l~--~-~~~p~~~~~~~p~~~~Li~~~L~~dP 349 (720)
++.+ ..++.++|||||||++|||++ ||........ .+.. .. . ....+......+...+||.+||++||
T Consensus 262 ~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP 341 (371)
T 3q60_A 262 FLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDR 341 (371)
T ss_dssp HHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCTTCTTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSST
T ss_pred hccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCcccccchhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCCh
Confidence 9987 569999999999999999999 6654422100 0000 00 0 11111112223445599999999999
Q ss_pred CCCCChHHHHcCcccCCCc
Q 004989 350 SGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 350 ~~Rpta~eiL~hp~~~~~~ 368 (720)
++|||+.++|+||||+...
T Consensus 342 ~~Rpt~~e~l~hp~f~~~~ 360 (371)
T 3q60_A 342 RRRLLPLEAMETPEFLQLQ 360 (371)
T ss_dssp TTCCCHHHHTTSHHHHHHH
T ss_pred hhCCCHHHHhcCHHHHHHH
Confidence 9999999999999998763
No 140
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=99.98 E-value=2.3e-33 Score=307.34 Aligned_cols=253 Identities=16% Similarity=0.112 Sum_probs=159.2
Q ss_pred hhhhhhcccCC--------CCCceecccceeecCCCCCcEEEEEecCCCCHHHHHh-CCCCCCCHHHHHHHHHHHHHHHH
Q 004989 65 HSDGVELTHGD--------HLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLD-KPKRSVDVYECLHIFRQIVEIVY 135 (720)
Q Consensus 65 ~~e~~~L~~l~--------HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~-~~~~~l~~~~~~~i~~QIl~aL~ 135 (720)
.+|..+|.++. ||||+++++.+...+.....+|+||||.+++|.+++. .....+++..++.|+.||+.||.
T Consensus 81 ~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~ 160 (397)
T 1wak_A 81 LDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLD 160 (397)
T ss_dssp HHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEETTEEEEEEEECCCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCCCCCCcceeeeeecceeecCCCCceEEEEEeccCccHHHHHHhcccCCCCHHHHHHHHHHHHHHHH
Confidence 36677777764 8889999995544433445789999998888888884 33356999999999999999999
Q ss_pred HHHHC-CceeccCCCCcEEEccCCceEEeecCcccCCCC---CCcccccccccccccCCCCCCc-hhhhhhhhccccccc
Q 004989 136 AAHSQ-GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGS---DSHEEGLNTQNMETKDLSSPLP-LDMLQRRTRLRREDL 210 (720)
Q Consensus 136 yLHs~-gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~---~~~~~~~~~~~~~~~~~~~~~~-~~~~~~r~~~~l~Df 210 (720)
|||++ ||+||||||+|||++.++.....+++....... .....................+ .........++++||
T Consensus 161 ~lH~~~givHrDikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Df 240 (397)
T 1wak_A 161 YLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADL 240 (397)
T ss_dssp HHHHTTCEECCCCSGGGEEECCCHHHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCG
T ss_pred HHHHhCCEecCCCCHHHeeEeccchhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccc
Confidence 99999 999999999999998765321111111100000 0000000000000000000000 111222335677788
Q ss_pred ccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCc
Q 004989 211 QLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSC 290 (720)
Q Consensus 211 gla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~ 290 (720)
|++...... ....+||+.|+|||++.+..++.
T Consensus 241 G~a~~~~~~------------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~ 272 (397)
T 1wak_A 241 GNACWVHKH------------------------------------------------FTEDIQTRQYRSLEVLIGSGYNT 272 (397)
T ss_dssp GGCEETTBC------------------------------------------------SCSCCSCGGGCCHHHHHTSCCCT
T ss_pred ccccccccc------------------------------------------------CccCCCCCcccCChhhcCCCCCc
Confidence 776532110 01147899999999999999999
Q ss_pred cccchhhhchhhhccc---cCCCCch------HH--HHHHHhhcCCCCccc-----------------------------
Q 004989 291 ASDIYRLGVLLFELFC---PFSTGEE------KT--RTMSSLRHRVLPPQL----------------------------- 330 (720)
Q Consensus 291 ~sDIwSLGvll~eLlt---pf~~~~~------~~--~~~~~l~~~~~p~~~----------------------------- 330 (720)
++|||||||+||||++ ||.+... .. ..+..+. +.+|..+
T Consensus 273 ~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (397)
T 1wak_A 273 PADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELL-GKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLF 351 (397)
T ss_dssp HHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHH-CSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHH
T ss_pred HHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhc-CCCChHHhhcccccccccCCccccccccccCCcchh
Confidence 9999999999999999 6654321 11 1111111 1111110
Q ss_pred ---------cc-cCchHHHHHHHcCCCCCCCCCChHHHHcCcccCC
Q 004989 331 ---------LL-KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 366 (720)
Q Consensus 331 ---------~~-~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~ 366 (720)
.. ..+...+||.+||++||.+|||+.|+|+||||+.
T Consensus 352 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~ 397 (397)
T 1wak_A 352 EVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLNS 397 (397)
T ss_dssp HHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTSGGGGC
T ss_pred HhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhCccccC
Confidence 00 0122349999999999999999999999999973
No 141
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=99.98 E-value=7.5e-33 Score=294.68 Aligned_cols=203 Identities=17% Similarity=0.189 Sum_probs=154.7
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCC--CCCHHHHHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKR--SVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~--~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
+..+|..+|.+++||||+++++ ++.... .+++|||| .+++|.+++..... .+++..++.++.||+.||.|||+
T Consensus 80 ~~~~E~~~l~~l~hp~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~ 155 (309)
T 3p86_A 80 EFLREVAIMKRLRHPNIVLFMG-AVTQPP---NLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN 155 (309)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EECSTT---CCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCCCCCEeeEEE-EEEECC---ceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHc
Confidence 4447888999999999999999 554443 46999999 89999999965432 38999999999999999999999
Q ss_pred CC--ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCC
Q 004989 140 QG--IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 140 ~g--IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~ 217 (720)
+| |+||||||+|||++.++.+||+|||++........
T Consensus 156 ~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~~----------------------------------------- 194 (309)
T 3p86_A 156 RNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFL----------------------------------------- 194 (309)
T ss_dssp SSSCCCCTTCCGGGEEECTTCCEEECCCC---------------------------------------------------
T ss_pred CCCCEECCCCChhhEEEeCCCcEEECCCCCCcccccccc-----------------------------------------
Confidence 99 99999999999999999999999988742211100
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhh
Q 004989 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRL 297 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSL 297 (720)
......||+.|+|||++.+..++.++|||||
T Consensus 195 -------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Diwsl 225 (309)
T 3p86_A 195 -------------------------------------------------SSKSAAGTPEWMAPEVLRDEPSNEKSDVYSF 225 (309)
T ss_dssp --------------------------------------------------------CCTTSCHHHHTTCCCCTTHHHHHH
T ss_pred -------------------------------------------------ccccCCCCccccChhhhcCCCCCchhhHHHH
Confidence 0011468999999999999999999999999
Q ss_pred hchhhhccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 298 GVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 298 Gvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
||++|||++ ||....... ....+........++..+ +...+||.+||..||.+|||+.++++
T Consensus 226 G~il~elltg~~Pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~ 291 (309)
T 3p86_A 226 GVILWELATLQQPWGNLNPAQ-VVAAVGFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMD 291 (309)
T ss_dssp HHHHHHHHHCCCTTTTSCHHH-HHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHhCCCCCCCCCHHH-HHHHHHhcCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 999999999 776655443 333332222222233333 44569999999999999999999987
No 142
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=99.98 E-value=7.8e-33 Score=298.86 Aligned_cols=225 Identities=17% Similarity=0.212 Sum_probs=163.6
Q ss_pred hchhhhhhcccCCCCCceecccceeecC--CCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENE--AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~--~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+..+|..+|.+++||||+++++ ++... .....+|++|||.+++|.+++... .+++..++.++.||+.||.|||++
T Consensus 55 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~L~~LH~~ 131 (353)
T 2b9h_A 55 RTLREIKILKHFKHENIITIFN-IQRPDSFENFNEVYIIQELMQTDLHRVISTQ--MLSDDHIQYFIYQTLRAVKVLHGS 131 (353)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-ECCCSCSTTCCCEEEEECCCSEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCcCCCcCCeee-eecccccCccceEEEEEeccCccHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHHC
Confidence 4457888999999999999999 44322 223468999999778999999653 499999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+|||++.++.+||+|||++........... ...
T Consensus 132 ~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~----------------------------~~~---------- 173 (353)
T 2b9h_A 132 NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNS----------------------------EPT---------- 173 (353)
T ss_dssp TEECSCCCGGGEEECTTCCEEECCCTTCEECC------------------------------------------------
T ss_pred CeecCCCCHHHeEEcCCCcEEEEeccccccccccccccc----------------------------Ccc----------
Confidence 999999999999999999999999998854322110000 000
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC-CCCCccccchhhhc
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGV 299 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sDIwSLGv 299 (720)
.........+||+.|+|||++.+ ..++.++|||||||
T Consensus 174 ------------------------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~ 211 (353)
T 2b9h_A 174 ------------------------------------------GQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGC 211 (353)
T ss_dssp ------------------------------------------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHH
T ss_pred ------------------------------------------ccccchhhccccccccCCeeeccCCCccchhhHHHHHH
Confidence 00000112478999999998865 56899999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhh--cCC-----------------------CCc----cc-cccCchHHHHHHHcCC
Q 004989 300 LLFELFC---PFSTGEEKTRTMSSLR--HRV-----------------------LPP----QL-LLKFPKEASFCLWLLH 346 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~--~~~-----------------------~p~----~~-~~~~p~~~~Li~~~L~ 346 (720)
++|+|++ ||.............. ... .+. .. ....+...+||.+||+
T Consensus 212 il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~ 291 (353)
T 2b9h_A 212 ILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLV 291 (353)
T ss_dssp HHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSC
T ss_pred HHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcC
Confidence 9999999 6665543322211111 000 000 01 1223444599999999
Q ss_pred CCCCCCCChHHHHcCcccCCCccc
Q 004989 347 PEPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 347 ~dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
+||.+|||+.|+|+||||+....+
T Consensus 292 ~dP~~Rpt~~ell~hp~~~~~~~~ 315 (353)
T 2b9h_A 292 FDPAKRITAKEALEHPYLQTYHDP 315 (353)
T ss_dssp SSGGGSCCHHHHHTSGGGTTTCCT
T ss_pred cCcccCCCHHHHhcCccccccCCc
Confidence 999999999999999999986543
No 143
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=99.98 E-value=1.3e-32 Score=293.74 Aligned_cols=214 Identities=15% Similarity=0.202 Sum_probs=159.9
Q ss_pred chhhhhhcccC-CCCCceecccceeecCC--CCCcEEEEEec-CCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHH
Q 004989 64 KHSDGVELTHG-DHLRNQGGLSGVCENEA--AIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 64 ~~~e~~~L~~l-~HpnIV~l~~~~~~~~~--~~~~~~lv~E~-~ggsL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
..+|..++.++ +||||+++++.+..... ....+|+|||| .+++|.+++... ...+++..++.++.||+.||.|||
T Consensus 67 ~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH 146 (326)
T 2x7f_A 67 IKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLH 146 (326)
T ss_dssp HHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccCCCCeeeeeeEEeeccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 33666778887 89999999994443221 13468999999 788999999543 345999999999999999999999
Q ss_pred HCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCC
Q 004989 139 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
++||+||||||+|||++.++.++|+|||++........
T Consensus 147 ~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~------------------------------------------ 184 (326)
T 2x7f_A 147 QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVG------------------------------------------ 184 (326)
T ss_dssp HTTCCCCCCSGGGEEECTTCCEEECCCTTTC-------------------------------------------------
T ss_pred HCCccccCCcHHHEEEcCCCCEEEeeCcCceecCcCcc------------------------------------------
Confidence 99999999999999999999999999988743211000
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCccccc-----CCCCCcccc
Q 004989 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-----GAPVSCASD 293 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~-----~~~~s~~sD 293 (720)
......||+.|+|||++. +..++.++|
T Consensus 185 ------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~D 216 (326)
T 2x7f_A 185 ------------------------------------------------RRNTFIGTPYWMAPEVIACDENPDATYDFKSD 216 (326)
T ss_dssp ------------------------------------------------------CCGGGCCHHHHC--------CCTTHH
T ss_pred ------------------------------------------------ccccccCCccccChhhhccccccCcCCCccch
Confidence 001136899999999997 455899999
Q ss_pred chhhhchhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCch-HHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004989 294 IYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 294 IwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~-~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
||||||++|+|++ ||......... ..+.....+......++. ..+||.+||..||.+|||+.++++||||+...
T Consensus 217 i~slG~il~~l~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~hp~~~~~~ 294 (326)
T 2x7f_A 217 LWSLGITAIEMAEGAPPLCDMHPMRAL-FLIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMKHPFIRDQP 294 (326)
T ss_dssp HHHHHHHHHHHHHSSCTTTTSCHHHHH-HHHHHSCCCCCSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTSHHHHCCT
T ss_pred HHHHHHHHHHHHhCCCCCCCCcHHHHH-HHhhcCccccCCccccCHHHHHHHHHHhccChhhCCCHHHHhhChHHhhCc
Confidence 9999999999999 66655444332 333333333333334444 45999999999999999999999999998763
No 144
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=99.98 E-value=1.8e-32 Score=283.89 Aligned_cols=200 Identities=16% Similarity=0.175 Sum_probs=157.4
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCC-CCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKR-SVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~-~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+..+|..+|.+++||||+++++ ++.+.. ...++++||| .+++|.+++..... .+++.+++.++.||+.||.|||++
T Consensus 53 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~ 130 (271)
T 3kmu_A 53 DFNEECPRLRIFSHPNVLPVLG-ACQSPP-APHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTL 130 (271)
T ss_dssp HHHHHGGGGCCCSCTTEECEEE-EECTTT-SSSCEEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHhcCCCchhheEE-EEccCC-CCCeEeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC
Confidence 4558888999999999999999 554432 2367999999 88999999965433 589999999999999999999999
Q ss_pred C--ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCC
Q 004989 141 G--IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 141 g--IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
| |+||||||+||+++.++.++++|||+.....
T Consensus 131 ~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~---------------------------------------------- 164 (271)
T 3kmu_A 131 EPLIPRHALNSRSVMIDEDMTARISMADVKFSFQ---------------------------------------------- 164 (271)
T ss_dssp SSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTS----------------------------------------------
T ss_pred CCceecCCCccceEEEcCCcceeEEeccceeeec----------------------------------------------
Confidence 9 9999999999999999999998766541100
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCc---cccch
Q 004989 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSC---ASDIY 295 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~---~sDIw 295 (720)
.....||+.|+|||++.+..++. ++|||
T Consensus 165 -------------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~ 195 (271)
T 3kmu_A 165 -------------------------------------------------SPGRMYAPAWVAPEALQKKPEDTNRRSADMW 195 (271)
T ss_dssp -------------------------------------------------CTTCBSCGGGSCHHHHHSCGGGSCHHHHHHH
T ss_pred -------------------------------------------------ccCccCCccccChhhhccCCCCCCCchhhHH
Confidence 00136799999999998876444 79999
Q ss_pred hhhchhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 296 RLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 296 SLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
||||++|||++ ||..................+ .++..++ ...+|+.+||+.||.+|||+.++++
T Consensus 196 slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 263 (271)
T 3kmu_A 196 SFAVLLWELVTREVPFADLSNMEIGMKVALEGLRP-TIPPGISPHVSKLMKICMNEDPAKRPKFDMIVP 263 (271)
T ss_dssp HHHHHHHHHHHCSCTTTTSCHHHHHHHHHHSCCCC-CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHHHhCCCCccccChHHHHHHHHhcCCCC-CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 99999999999 776665554444444333333 3333344 4559999999999999999999985
No 145
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=99.98 E-value=7.2e-33 Score=288.93 Aligned_cols=214 Identities=17% Similarity=0.226 Sum_probs=165.6
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~---~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
+..+|..++.+++||||+++++.+.... ...+|+|||| .+++|.+++.. ....+++..++.++.||+.||.|||
T Consensus 51 ~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH 128 (279)
T 2w5a_A 51 MLVSEVNLLRELKHPNIVRYYDRIIDRT--NTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECH 128 (279)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEEEEEEGG--GTEEEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCCeEEEEEecCC--CceEEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 4447888999999999999999443322 2368999999 78899999943 2345999999999999999999999
Q ss_pred HCC-----ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccc
Q 004989 139 SQG-----IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLV 213 (720)
Q Consensus 139 s~g-----IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla 213 (720)
++| |+||||||+||+++.++.+||+|||.+...+... .
T Consensus 129 ~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~~~~~~---------------------------------~---- 171 (279)
T 2w5a_A 129 RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDT---------------------------------S---- 171 (279)
T ss_dssp HHC------CCCCCSGGGEEECSSSCEEECCCCHHHHC---C---------------------------------H----
T ss_pred cccCCCCeeEEeccchhhEEEcCCCCEEEecCchheeecccc---------------------------------c----
Confidence 999 9999999999999999999999998874321110 0
Q ss_pred cCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCcccc
Q 004989 214 TAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASD 293 (720)
Q Consensus 214 ~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sD 293 (720)
......||+.|+|||++.+..++.++|
T Consensus 172 -----------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~D 198 (279)
T 2w5a_A 172 -----------------------------------------------------FAKTFVGTPYYMSPEQMNRMSYNEKSD 198 (279)
T ss_dssp -----------------------------------------------------HHHHHHSCCTTCCHHHHHCC-CCHHHH
T ss_pred -----------------------------------------------------cccccCCCccccChHHhccCCCCchhh
Confidence 000136799999999999988999999
Q ss_pred chhhhchhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004989 294 IYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 294 IwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
||||||++|+|++ ||...... .....+..+..++......+...+||.+||+.||.+|||+.|+|+|+|+.+...
T Consensus 199 i~slG~il~~l~~g~~p~~~~~~~-~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~~~~ 276 (279)
T 2w5a_A 199 IWSLGCLLYELCALMPPFTAFSQK-ELAGKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLILEHHH 276 (279)
T ss_dssp HHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCGGGS
T ss_pred HHHHHHHHHHHHHCCCCCcccCHH-HHHHHHhhcccccCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhhhhcc
Confidence 9999999999999 66655433 344445444443322223344569999999999999999999999999998743
No 146
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=99.98 E-value=1.3e-32 Score=292.21 Aligned_cols=219 Identities=15% Similarity=0.152 Sum_probs=161.3
Q ss_pred hchhhhhhcccCCCCCceecccceeecC-----------CCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENE-----------AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIV 131 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~-----------~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl 131 (720)
+..+|..++.+++||||+++++ ++... .....+|+||||.+++|.+++.+ ..+++..++.++.||+
T Consensus 54 ~~~~e~~~l~~l~h~~iv~~~~-~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~--~~~~~~~~~~~~~qi~ 130 (320)
T 2i6l_A 54 HALREIKIIRRLDHDNIVKVFE-ILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQ--GPLLEEHARLFMYQLL 130 (320)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEE-EECTTSCBCCC----CCSCSEEEEEEECCSEEHHHHHTT--CCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCeeEEEE-eccccccccccccccccccCceeEEeeccCCCHHHHhhc--CCccHHHHHHHHHHHH
Confidence 4447888999999999999999 44222 22346899999966799999954 3489999999999999
Q ss_pred HHHHHHHHCCceeccCCCCcEEEc-cCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhccccccc
Q 004989 132 EIVYAAHSQGIVVHNVRPSCFVMS-SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDL 210 (720)
Q Consensus 132 ~aL~yLHs~gIvHrDLKP~NILl~-~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Df 210 (720)
.||.|||++||+||||||+|||++ .++.+||+|||.+...+.....
T Consensus 131 ~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~--------------------------------- 177 (320)
T 2i6l_A 131 RGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSH--------------------------------- 177 (320)
T ss_dssp HHHHHHHHTTCBCCCCSGGGEEEETTTTEEEECCCTTCBCC---------------------------------------
T ss_pred HHHHHHHhCCEecCCCCHHHEEEcCCCCeEEEccCccccccCCCccc---------------------------------
Confidence 999999999999999999999997 5678999999987443111000
Q ss_pred ccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC-CCCC
Q 004989 211 QLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVS 289 (720)
Q Consensus 211 gla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s 289 (720)
........||++|+|||++.+ ..++
T Consensus 178 ------------------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~ 203 (320)
T 2i6l_A 178 ------------------------------------------------------KGHLSEGLVTKWYRSPRLLLSPNNYT 203 (320)
T ss_dssp --------------------------------------------------------CCCGGGSCCTTCCHHHHHCTTCCC
T ss_pred ------------------------------------------------------ccccccccccccccCcHHhcCcccCC
Confidence 000011367999999999876 5589
Q ss_pred ccccchhhhchhhhccc---cCCCCchHHHHHHHhhcCCC-----------------------C----ccccccC-chHH
Q 004989 290 CASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVL-----------------------P----PQLLLKF-PKEA 338 (720)
Q Consensus 290 ~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~-----------------------p----~~~~~~~-p~~~ 338 (720)
.++|||||||++|||++ ||............+..... + ....... +...
T Consensus 204 ~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (320)
T 2i6l_A 204 KAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAV 283 (320)
T ss_dssp HHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHH
T ss_pred chhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHH
Confidence 99999999999999999 67665543322222211100 0 0111223 3445
Q ss_pred HHHHHcCCCCCCCCCChHHHHcCcccCCCccch
Q 004989 339 SFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSM 371 (720)
Q Consensus 339 ~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~l 371 (720)
+||.+||+.||.+|||+.|+|+||||+....+.
T Consensus 284 ~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~p~ 316 (320)
T 2i6l_A 284 DFLEQILTFSPMDRLTAEEALSHPYMSIYSFPM 316 (320)
T ss_dssp HHHHTTSCSSGGGSCCHHHHHTSHHHHTTCC--
T ss_pred HHHHHHcCCCccccCCHHHHhCCcccccccCcc
Confidence 999999999999999999999999999764443
No 147
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=99.98 E-value=1.5e-32 Score=288.66 Aligned_cols=212 Identities=19% Similarity=0.190 Sum_probs=160.3
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC--CCCCCHHHHHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP--KRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~--~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
+..+|..++..++||||+++++ ++.... .++++||| .+++|.+++... ...+++..++.++.||+.||.|||+
T Consensus 65 ~~~~e~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~ 140 (295)
T 2clq_A 65 PLHEEIALHKHLKHKNIVQYLG-SFSENG---FIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHD 140 (295)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEE-EEEETT---EEEEEEECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCEeeEee-EEEeCC---cEEEEEEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHh
Confidence 3447778999999999999999 554443 67999999 799999999543 2346799999999999999999999
Q ss_pred CCceeccCCCCcEEEcc-CCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCC
Q 004989 140 QGIVVHNVRPSCFVMSS-FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~-~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
+||+||||||+||+++. ++.++|+|||.+........
T Consensus 141 ~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~------------------------------------------ 178 (295)
T 2clq_A 141 NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP------------------------------------------ 178 (295)
T ss_dssp TTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC---------------------------------------------
T ss_pred CCEEccCCChhhEEEECCCCCEEEeecccccccCCCCC------------------------------------------
Confidence 99999999999999987 89999999988743211000
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC--CCccccchh
Q 004989 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP--VSCASDIYR 296 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~--~s~~sDIwS 296 (720)
......||+.|+|||++.+.. ++.++||||
T Consensus 179 ------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~s 210 (295)
T 2clq_A 179 ------------------------------------------------CTETFTGTLQYMAPEIIDKGPRGYGKAADIWS 210 (295)
T ss_dssp --------------------------------------------------CCCCCCGGGCCHHHHHHGGGGCSHHHHHHH
T ss_pred ------------------------------------------------cccccCCCccccChhhhcCCCCCCCcHHHHHH
Confidence 001136899999999997654 789999999
Q ss_pred hhchhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004989 297 LGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 297 LGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
|||++|+|++ ||.........+.........+.+...++ ...+|+.+||++||.+|||+.++|+||||+...
T Consensus 211 lG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~ 286 (295)
T 2clq_A 211 LGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKRACANDLLVDEFLKVSS 286 (295)
T ss_dssp HHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHCCCCCCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHTSGGGCC--
T ss_pred HHHHHHHHHHCCCCccCCCchhHHHHhhccccccccccccCCHHHHHHHHHHccCChhhCCCHHHHhcChhhhhcc
Confidence 9999999999 55443222222222221122233333344 445999999999999999999999999999763
No 148
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=99.98 E-value=9.8e-33 Score=295.23 Aligned_cols=207 Identities=17% Similarity=0.250 Sum_probs=153.9
Q ss_pred hhhhhhcccCCCCC------ceecccceeecCCCCCcEEEEEecCCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHH
Q 004989 65 HSDGVELTHGDHLR------NQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAA 137 (720)
Q Consensus 65 ~~e~~~L~~l~Hpn------IV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~yL 137 (720)
.+|..++..++|+| |+++++ ++.... .+|+||||.+++|.+++... ...+++.+++.++.||+.||.||
T Consensus 59 ~~e~~~l~~l~~~~~~~~~~i~~~~~-~~~~~~---~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~l 134 (339)
T 1z57_A 59 RSEIQVLEHLNTTDPNSTFRCVQMLE-WFEHHG---HICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFL 134 (339)
T ss_dssp HHHHHHHHHHHHHCTTCTTCBCCEEE-EEEETT---EEEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhcCCCCceeeEeeec-ccccCC---cEEEEEcCCCCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHH
Confidence 36666777666654 899999 555443 68999999999999999543 34589999999999999999999
Q ss_pred HHCCceeccCCCCcEEEcc-------------------CCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhh
Q 004989 138 HSQGIVVHNVRPSCFVMSS-------------------FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDM 198 (720)
Q Consensus 138 Hs~gIvHrDLKP~NILl~~-------------------~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (720)
|++||+||||||+|||++. ++.+||+|||.+...
T Consensus 135 H~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~--------------------------- 187 (339)
T 1z57_A 135 HSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYD--------------------------- 187 (339)
T ss_dssp HHTTEECCCCCGGGEEESCCCEEEEEC----CEEEEESCCCEEECCCSSCEET---------------------------
T ss_pred HHCCCcCCCCCHHHEEEeccccccccCCccccccccccCCCceEeeCcccccC---------------------------
Confidence 9999999999999999987 445666666554211
Q ss_pred hhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCccc
Q 004989 199 LQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYA 278 (720)
Q Consensus 199 ~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~ 278 (720)
.. ......||+.|+
T Consensus 188 ------------------~~------------------------------------------------~~~~~~gt~~y~ 201 (339)
T 1z57_A 188 ------------------DE------------------------------------------------HHSTLVSTRHYR 201 (339)
T ss_dssp ------------------TS------------------------------------------------CCCSSCSCGGGC
T ss_pred ------------------cc------------------------------------------------ccccccCCcccc
Confidence 00 001146899999
Q ss_pred CcccccCCCCCccccchhhhchhhhccc---cCCCCchHHH--HHHHhhcCCCCcccc----------------------
Q 004989 279 SPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTR--TMSSLRHRVLPPQLL---------------------- 331 (720)
Q Consensus 279 APE~l~~~~~s~~sDIwSLGvll~eLlt---pf~~~~~~~~--~~~~l~~~~~p~~~~---------------------- 331 (720)
|||++.+..++.++|||||||++|||++ ||........ .+..+. +.+|+.+.
T Consensus 202 aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (339)
T 1z57_A 202 APEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERIL-GPLPKHMIQKTRKRKYFHHDRLDWDEHSSA 280 (339)
T ss_dssp CHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHHHHHHH-CSCCHHHHHHCSCGGGEETTEECCCTTSHH
T ss_pred ChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHh-CCCCHHHHhhccchhHHhhccccccccccc
Confidence 9999999889999999999999999999 6665443321 111111 11221110
Q ss_pred -------------------ccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004989 332 -------------------LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 332 -------------------~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
...+...+||.+||++||.+|||+.|+|+||||+....
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~ 337 (339)
T 1z57_A 281 GRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFFDLLKK 337 (339)
T ss_dssp HHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGGGGC
T ss_pred cchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhcCHHHHHHhc
Confidence 00123459999999999999999999999999987643
No 149
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=99.98 E-value=1.2e-32 Score=294.87 Aligned_cols=206 Identities=15% Similarity=0.103 Sum_probs=159.5
Q ss_pred hhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 62 LRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 62 ~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
.+..+|..++.+++||||+++++ ++... .+++|||| .+++|.+++......+++..++.++.||+.||.|||++
T Consensus 60 ~~~~~e~~~l~~l~h~~iv~~~~-~~~~~----~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~ 134 (325)
T 3kex_A 60 QAVTDHMLAIGSLDHAHIVRLLG-LCPGS----SLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEH 134 (325)
T ss_dssp CSCCHHHHHHHTCCCTTBCCEEE-EECBS----SEEEEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcCCCCCcCeEEE-EEcCC----ccEEEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhC
Confidence 34457888999999999999999 55433 47899999 89999999976655699999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+|||++.++.+||+|||++.........
T Consensus 135 ~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~------------------------------------------- 171 (325)
T 3kex_A 135 GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQ------------------------------------------- 171 (325)
T ss_dssp TCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCTTC-------------------------------------------
T ss_pred CCCCCccchheEEECCCCeEEECCCCcccccCccccc-------------------------------------------
Confidence 9999999999999999999999999988543221000
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhch
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
.......||+.|+|||++.+..++.++|||||||+
T Consensus 172 ---------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~ 206 (325)
T 3kex_A 172 ---------------------------------------------LLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVT 206 (325)
T ss_dssp ---------------------------------------------CC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHH
T ss_pred ---------------------------------------------ccccCCCCcccccChHHhccCCCChhhHhHHhHHH
Confidence 00011357889999999998889999999999999
Q ss_pred hhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004989 301 LFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 301 l~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~h 361 (720)
+|||++ ||...... .....+.....++......+...+|+.+||..||.+|||+.+++++
T Consensus 207 l~el~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~ 270 (325)
T 3kex_A 207 VWELMTFGAEPYAGLRLA-EVPDLLEKGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANE 270 (325)
T ss_dssp HHHHHTTSCCTTTTSCTT-HHHHHHHTTCBCCCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHH
T ss_pred HHHHHhCCCCCccccCHH-HHHHHHHcCCCCCCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 999998 56554332 2333333332222222233455699999999999999999999873
No 150
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=99.98 E-value=4.3e-33 Score=297.98 Aligned_cols=211 Identities=14% Similarity=0.080 Sum_probs=158.3
Q ss_pred chhhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 004989 60 FELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 60 ~~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
...+.++|..+|.+++|||||++++.+.........+|+|||| .+++|.+++... .+++..++.++.||+.||.|||
T Consensus 61 ~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~qi~~al~~LH 138 (322)
T 3soc_A 61 QSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKAN--VVSWNELCHIAETMARGLAYLH 138 (322)
T ss_dssp HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEEecCCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHH
Confidence 3445567888999999999999999444434334468999999 889999999654 3999999999999999999999
Q ss_pred HC----------CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhccccc
Q 004989 139 SQ----------GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRRE 208 (720)
Q Consensus 139 s~----------gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~ 208 (720)
+. ||+||||||+|||++.++.+||+|||++.........
T Consensus 139 ~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a~~~~~~~~~------------------------------- 187 (322)
T 3soc_A 139 EDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSA------------------------------- 187 (322)
T ss_dssp CCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTCEEECTTSCC-------------------------------
T ss_pred hhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCcccccccccCc-------------------------------
Confidence 99 9999999999999999999999999987432111000
Q ss_pred ccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC--
Q 004989 209 DLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-- 286 (720)
Q Consensus 209 Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-- 286 (720)
.......||+.|+|||++.+.
T Consensus 188 ---------------------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~ 210 (322)
T 3soc_A 188 ---------------------------------------------------------GDTHGQVGTRRYMAPEVLEGAIN 210 (322)
T ss_dssp ---------------------------------------------------------CCCTTCCCCGGGCCHHHHTTCCC
T ss_pred ---------------------------------------------------------cccccCccCccccCHhhcccccc
Confidence 000114689999999999873
Q ss_pred ---CCCccccchhhhchhhhccc---cCCCCc---------------hHHHHHHHhhcCCCCccccccC------chHHH
Q 004989 287 ---PVSCASDIYRLGVLLFELFC---PFSTGE---------------EKTRTMSSLRHRVLPPQLLLKF------PKEAS 339 (720)
Q Consensus 287 ---~~s~~sDIwSLGvll~eLlt---pf~~~~---------------~~~~~~~~l~~~~~p~~~~~~~------p~~~~ 339 (720)
.++.++|||||||++|||++ ||.... ........+......+.+...+ +...+
T Consensus 211 ~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 290 (322)
T 3soc_A 211 FQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCE 290 (322)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHH
T ss_pred cCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCchhhhhhhhhcccCCCCccccccccchHHHHHH
Confidence 36778999999999999999 564321 1122222233333333332222 22559
Q ss_pred HHHHcCCCCCCCCCChHHHHc
Q 004989 340 FCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 340 Li~~~L~~dP~~Rpta~eiL~ 360 (720)
||.+||+.||.+|||+.|+++
T Consensus 291 li~~cl~~dP~~Rps~~ell~ 311 (322)
T 3soc_A 291 TIEECWDHDAEARLSAGCVGE 311 (322)
T ss_dssp HHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHccCChhhCcCHHHHHH
Confidence 999999999999999999985
No 151
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=99.98 E-value=1.1e-32 Score=299.28 Aligned_cols=208 Identities=17% Similarity=0.221 Sum_probs=159.2
Q ss_pred chhhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 64 KHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 64 ~~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
..+|..+|.++ +||||+++++ ++.... .+|+|||| .+++|.+++.... .+++.+++.++.||+.||.|||++|
T Consensus 105 ~~~E~~~l~~l~~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~ 179 (355)
T 1vzo_A 105 TRTERQVLEHIRQSPFLVTLHY-AFQTET---KLHLILDYINGGELFTHLSQRE-RFTEHEVQIYVGEIVLALEHLHKLG 179 (355)
T ss_dssp CCCHHHHHHHHHTCTTBCCEEE-EEEETT---EEEEEECCCCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHccCCCceeEEEE-EEeeCc---eEEEEeecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 33677788888 6999999999 554443 57999999 8899999995543 4999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||+++.......
T Consensus 180 ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~--------------------------------------------- 214 (355)
T 1vzo_A 180 IIYRDIKLENILLDSNGHVVLTDFGLSKEFVADET--------------------------------------------- 214 (355)
T ss_dssp CCCCCCCGGGEEECTTSCEEESCSSEEEECCGGGG---------------------------------------------
T ss_pred cccCCCCHHHEEECCCCcEEEeeCCCCeecccCCC---------------------------------------------
Confidence 99999999999999999999999988743211000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC--CCCccccchhhhc
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA--PVSCASDIYRLGV 299 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~--~~s~~sDIwSLGv 299 (720)
......+||+.|+|||++.+. .++.++|||||||
T Consensus 215 --------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~ 250 (355)
T 1vzo_A 215 --------------------------------------------ERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGV 250 (355)
T ss_dssp --------------------------------------------GGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHH
T ss_pred --------------------------------------------CcccCcccCcCccChhhhcCCCCCCCchhhHHHHHH
Confidence 000114789999999999864 3789999999999
Q ss_pred hhhhccc---cCCCCc---hHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC
Q 004989 300 LLFELFC---PFSTGE---EKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 367 (720)
Q Consensus 300 ll~eLlt---pf~~~~---~~~~~~~~l~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~ 367 (720)
++|||++ ||.... ........+.... + .++..+ +...+||.+||.+||.+|| ++.|+++||||...
T Consensus 251 il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f~~~ 328 (355)
T 1vzo_A 251 LMYELLTGASPFTVDGEKNSQAEISRRILKSE-P-PYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKI 328 (355)
T ss_dssp HHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCC-C-CCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTC
T ss_pred HHHHHHHCCCCCccCCccchHHHHHHHHhccC-C-CCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcchhcC
Confidence 9999999 665321 2222222222221 1 222233 4445999999999999999 99999999999976
No 152
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=99.97 E-value=2.1e-32 Score=298.70 Aligned_cols=205 Identities=16% Similarity=0.173 Sum_probs=159.8
Q ss_pred hchhhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC---------------CCCCHHHHHH
Q 004989 63 RKHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---------------RSVDVYECLH 125 (720)
Q Consensus 63 r~~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~---------------~~l~~~~~~~ 125 (720)
+..+|..+|..+ +|||||++++ ++.... .+|+|||| .|++|.++|.... ..+++.+++.
T Consensus 132 ~~~~E~~~l~~l~~hpnIv~~~~-~~~~~~---~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (370)
T 2psq_A 132 DLVSEMEMMKMIGKHKNIINLLG-ACTQDG---PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 207 (370)
T ss_dssp HHHHHHHHHHHSCCCTTBCCEEE-EECSSS---SCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCEeeEEE-EEccCC---CEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHH
Confidence 344788899999 8999999999 555443 57999999 8899999995432 3489999999
Q ss_pred HHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcc
Q 004989 126 IFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRL 205 (720)
Q Consensus 126 i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 205 (720)
++.||+.||.|||++||+||||||+|||++.++.+||+|||++........
T Consensus 208 i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~----------------------------- 258 (370)
T 2psq_A 208 CTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDY----------------------------- 258 (370)
T ss_dssp HHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCSSCEETTCCCT-----------------------------
T ss_pred HHHHHHHHHHHHHhCCeeccccchhhEEECCCCCEEEccccCCcccCcccc-----------------------------
Confidence 999999999999999999999999999999999999999998853321100
Q ss_pred cccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC
Q 004989 206 RREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG 285 (720)
Q Consensus 206 ~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 285 (720)
+ .......||+.|+|||++.+
T Consensus 259 ----~-------------------------------------------------------~~~~~~~~t~~y~aPE~~~~ 279 (370)
T 2psq_A 259 ----Y-------------------------------------------------------KKTTNGRLPVKWMAPEALFD 279 (370)
T ss_dssp ----T-------------------------------------------------------CTTTTTTSCGGGCCHHHHHT
T ss_pred ----e-------------------------------------------------------ecccCCCcccceECHhHhcC
Confidence 0 00011356889999999999
Q ss_pred CCCCccccchhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 286 APVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 286 ~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
..++.++|||||||++|||++ ||...... ..+..+..+..++......+...+||.+||+.||.+|||+.|+++
T Consensus 280 ~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~ 357 (370)
T 2psq_A 280 RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE-ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 357 (370)
T ss_dssp CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG-GHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHH-HHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 999999999999999999998 56554332 334444444333332233345569999999999999999999986
No 153
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=99.97 E-value=2e-32 Score=293.43 Aligned_cols=206 Identities=15% Similarity=0.147 Sum_probs=160.9
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++||||+++++ ++.+.. .+|+|||| .|++|.+++......+++.+++.++.||+.||.|||++|
T Consensus 96 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ 171 (325)
T 3kul_A 96 DFLSEASIMGQFDHPNIIRLEG-VVTRGR---LAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLG 171 (325)
T ss_dssp HHHHHHHHHTTCCCTTBCCEEE-EECGGG---CCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCCCcEEE-EEEeCC---ccEEEeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3447888999999999999999 555543 46999999 799999999766667999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||++......... .+
T Consensus 172 ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~-------------------------------~~----------- 209 (325)
T 3kul_A 172 YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDA-------------------------------AY----------- 209 (325)
T ss_dssp EECSCCSGGGEEECTTCCEEECCCSSCEECC----C-------------------------------CE-----------
T ss_pred eeCCCCCcceEEECCCCCEEECCCCcccccccCccc-------------------------------ee-----------
Confidence 999999999999999999999999988543211000 00
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......+|+.|+|||++.+..++.++|||||||++
T Consensus 210 ---------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il 244 (325)
T 3kul_A 210 ---------------------------------------------TTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVM 244 (325)
T ss_dssp ---------------------------------------------ECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHH
T ss_pred ---------------------------------------------eccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHH
Confidence 00013468899999999988899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||...... .....+.....++......+...+|+.+||+.||.+|||+.++++
T Consensus 245 ~ell~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~ 306 (325)
T 3kul_A 245 WEVLAYGERPYWNMTNR-DVISSVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVS 306 (325)
T ss_dssp HHHHTTSCCTTTTSCHH-HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHcCCCCCcccCCHH-HHHHHHHcCCCCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 99997 56554443 344444444333333333345569999999999999999999986
No 154
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=99.97 E-value=4.4e-32 Score=284.36 Aligned_cols=199 Identities=14% Similarity=0.187 Sum_probs=156.8
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++.+++||||+++++ ++.+.. +++||| .+++|.+++......+++..++.++.||+.||.|||++|
T Consensus 69 ~~~~E~~~l~~l~h~~i~~~~~-~~~~~~-----~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~ 142 (287)
T 4f0f_A 69 EFQREVFIMSNLNHPNIVKLYG-LMHNPP-----RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQN 142 (287)
T ss_dssp HHHHHHHHHTTCCCTTBCCEEE-EETTTT-----EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTSS
T ss_pred HHHHHHHHHHhCCCCCchhhhe-eecCCC-----eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhCC
Confidence 3447888999999999999999 554442 799999 889999999776667999999999999999999999999
Q ss_pred --ceeccCCCCcEEEccCCc-----eEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhccccccccccc
Q 004989 142 --IVVHNVRPSCFVMSSFNH-----VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVT 214 (720)
Q Consensus 142 --IvHrDLKP~NILl~~~~~-----vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~ 214 (720)
|+||||||+|||++.++. +||+|||.+......
T Consensus 143 ~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~~~~~~~---------------------------------------- 182 (287)
T 4f0f_A 143 PPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHS---------------------------------------- 182 (287)
T ss_dssp SCCBCSCCSGGGEEESCCCTTCSCCEEECCCTTCBCCSSC----------------------------------------
T ss_pred CCeecCCCCcceEEEeccCCCCceeEEeCCCCcccccccc----------------------------------------
Confidence 999999999999988776 999888877321100
Q ss_pred CCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCccccc--CCCCCccc
Q 004989 215 APTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA--GAPVSCAS 292 (720)
Q Consensus 215 ~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~--~~~~s~~s 292 (720)
.....||+.|+|||++. ...++.++
T Consensus 183 -----------------------------------------------------~~~~~g~~~y~aPE~~~~~~~~~~~~~ 209 (287)
T 4f0f_A 183 -----------------------------------------------------VSGLLGNFQWMAPETIGAEEESYTEKA 209 (287)
T ss_dssp -----------------------------------------------------EECCCCCCTTSCGGGSSCSSCEECHHH
T ss_pred -----------------------------------------------------ccccCCCccccCchhhccCCCCcCchh
Confidence 01146899999999994 34478999
Q ss_pred cchhhhchhhhccc---cCCCCchH-HHHHHHhhcCCCCccccccCch-HHHHHHHcCCCCCCCCCChHHHHc
Q 004989 293 DIYRLGVLLFELFC---PFSTGEEK-TRTMSSLRHRVLPPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 293 DIwSLGvll~eLlt---pf~~~~~~-~~~~~~l~~~~~p~~~~~~~p~-~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||||||++|||++ ||...... ......+.....++.+...++. ..+|+.+||+.||.+|||+.++++
T Consensus 210 Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 282 (287)
T 4f0f_A 210 DTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVK 282 (287)
T ss_dssp HHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred hHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhccCCCCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 99999999999999 67654322 2223333333444444444444 459999999999999999999986
No 155
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.97 E-value=1.6e-32 Score=285.21 Aligned_cols=204 Identities=15% Similarity=0.174 Sum_probs=161.4
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++.+++||||+++++ ++.+.. .+|+|||| .+++|.+++......+++..++.++.||+.||.|||++||
T Consensus 52 ~~~E~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i 127 (269)
T 4hcu_A 52 FIEEAEVMMKLSHPKLVQLYG-VCLEQA---PICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACV 127 (269)
T ss_dssp HHHHHHHHHTCCCTTBCCEEE-EECSSS---SEEEEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhCCCCCEeeEEE-EEecCC---ceEEEEEeCCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 447888999999999999999 554443 57999999 8999999997666679999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.++|+|||.+....... .
T Consensus 128 ~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~----------------------------------~------------ 161 (269)
T 4hcu_A 128 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ----------------------------------Y------------ 161 (269)
T ss_dssp CCSCCCGGGEEECGGGCEEECCTTGGGGBCCHH----------------------------------H------------
T ss_pred ecCCcchheEEEcCCCCEEeccccccccccccc----------------------------------c------------
Confidence 999999999999999999999998874321110 0
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
. ......+|+.|+|||++.+..++.++|||||||++|
T Consensus 162 ------------------------~-------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ 198 (269)
T 4hcu_A 162 ------------------------T-------------------SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMW 198 (269)
T ss_dssp ------------------------H-------------------STTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred ------------------------c-------------------cccCcccccccCCHHHhcCCCCCchhhhHHHHHHHH
Confidence 0 000135688899999999888999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004989 303 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~h 361 (720)
+|++ ||...... .....+.....+.......+...+|+.+||+.||.+|||+.+++++
T Consensus 199 ~ll~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 260 (269)
T 4hcu_A 199 EVFSEGKIPYENRSNS-EVVEDISTGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQ 260 (269)
T ss_dssp HHHTTSCCTTTTCCHH-HHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHhcCCCCCCCCCCHH-HHHHHHhcCccCCCCCcCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence 9998 56554443 4444454443332222234455699999999999999999999873
No 156
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=99.97 E-value=3e-32 Score=287.06 Aligned_cols=207 Identities=15% Similarity=0.198 Sum_probs=162.0
Q ss_pred hhhhhhcccCC-CCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 65 HSDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~L~~l~-HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
.+|..+|.++. ||||+++++ ++.... .+++|||| .+++|.+++... ..+++..++.++.||+.||.|||++||
T Consensus 71 ~~e~~~l~~l~~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i 145 (298)
T 1phk_A 71 LKEVDILRKVSGHPNIIQLKD-TYETNT---FFFLVFDLMKKGELFDYLTEK-VTLSEKETRKIMRALLEVICALHKLNI 145 (298)
T ss_dssp HHHHHHHHHHTTCTTBCCEEE-EEECSS---EEEEEEECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHhcCCCCEeeeee-eeccCC---eEEEEEeccCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 37788888885 999999999 555443 68999999 789999999553 349999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.++|+|||.+.......
T Consensus 146 ~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~----------------------------------------------- 178 (298)
T 1phk_A 146 VHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE----------------------------------------------- 178 (298)
T ss_dssp ECSCCSGGGEEECTTCCEEECCCTTCEECCTTC-----------------------------------------------
T ss_pred ccCCCCcceEEEcCCCcEEEecccchhhcCCCc-----------------------------------------------
Confidence 999999999999999999999998874321110
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCccccc------CCCCCccccchh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA------GAPVSCASDIYR 296 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~------~~~~s~~sDIwS 296 (720)
......||+.|+|||++. ...++.++||||
T Consensus 179 --------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~s 214 (298)
T 1phk_A 179 --------------------------------------------KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWS 214 (298)
T ss_dssp --------------------------------------------CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHH
T ss_pred --------------------------------------------ccccccCCccccCHHHhccccccccccCCcccccHh
Confidence 001136799999999985 445899999999
Q ss_pred hhchhhhccc---cCCCCchHHHHHHHhhcCC--CCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004989 297 LGVLLFELFC---PFSTGEEKTRTMSSLRHRV--LPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 297 LGvll~eLlt---pf~~~~~~~~~~~~l~~~~--~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
|||++|+|++ ||...... .....+.... ++......+ +...+|+.+||+.||.+|||+.|+|+||||++..
T Consensus 215 lG~~l~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~ 291 (298)
T 1phk_A 215 TGVIMYTLLAGSPPFWHRKQM-LMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQYV 291 (298)
T ss_dssp HHHHHHHHHHSSCSSCCSSHH-HHHHHHHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCTTC
T ss_pred HHHHHHHHHHCCCCCcCccHH-HHHHHHhcCCcccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHhChHhhhcc
Confidence 9999999999 66654443 2333333322 222222233 4455999999999999999999999999999763
No 157
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=99.97 E-value=1.2e-32 Score=293.62 Aligned_cols=206 Identities=15% Similarity=0.174 Sum_probs=155.4
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC--CCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK--RSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~--~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
..+|..+|.+++||||+++++ ++.... ...+|+|||| .+++|.+++.... ..+++.+++.++.||+.||.|||++
T Consensus 54 ~~~E~~~l~~l~h~~iv~~~~-~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~ 131 (319)
T 4euu_A 54 QMREFEVLKKLNHKNIVKLFA-IEEETT-TRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN 131 (319)
T ss_dssp HHHHHHHHHHCCCTTBCCEEE-EEECTT-TCCEEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhcCCCCcceEEE-EeecCC-CceEEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 347888999999999999999 444332 2367999999 7899999995432 2389999999999999999999999
Q ss_pred CceeccCCCCcEEE----ccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCC
Q 004989 141 GIVVHNVRPSCFVM----SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 216 (720)
Q Consensus 141 gIvHrDLKP~NILl----~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~ 216 (720)
||+||||||+|||+ +..+.+||+|||++.......
T Consensus 132 ~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~~~----------------------------------------- 170 (319)
T 4euu_A 132 GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE----------------------------------------- 170 (319)
T ss_dssp TEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCTTC-----------------------------------------
T ss_pred CEecCCCCHHHEEEeccCCCCceEEEccCCCceecCCCC-----------------------------------------
Confidence 99999999999999 677789999888874321110
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCccccc--------CCCC
Q 004989 217 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA--------GAPV 288 (720)
Q Consensus 217 ~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~--------~~~~ 288 (720)
......||+.|+|||++. +..+
T Consensus 171 --------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~ 200 (319)
T 4euu_A 171 --------------------------------------------------QFVSLYGTEEYLHPDMYERAVLRKDHQKKY 200 (319)
T ss_dssp --------------------------------------------------CBCCCCSCGGGCCHHHHHHHTSCCCCCCCB
T ss_pred --------------------------------------------------ceeecccCCCccCHHHhhhccccccccCCC
Confidence 001146899999999986 4668
Q ss_pred Cccccchhhhchhhhccc---cCCCC---chHHHHHHHhhcCCCCc-----------------------cccccCc-hHH
Q 004989 289 SCASDIYRLGVLLFELFC---PFSTG---EEKTRTMSSLRHRVLPP-----------------------QLLLKFP-KEA 338 (720)
Q Consensus 289 s~~sDIwSLGvll~eLlt---pf~~~---~~~~~~~~~l~~~~~p~-----------------------~~~~~~p-~~~ 338 (720)
+.++|||||||++|||++ ||.+. ......+..+..+..+. .+....+ ...
T Consensus 201 ~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 280 (319)
T 4euu_A 201 GATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLT 280 (319)
T ss_dssp CTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhH
Confidence 999999999999999999 66432 22223333333222111 1111112 234
Q ss_pred HHHHHcCCCCCCCCCChHHHHcCc
Q 004989 339 SFCLWLLHPEPSGRPKMGELLQSE 362 (720)
Q Consensus 339 ~Li~~~L~~dP~~Rpta~eiL~hp 362 (720)
+|+.+||++||++|||++|+|+||
T Consensus 281 ~ll~~~L~~dP~~R~s~~ell~h~ 304 (319)
T 4euu_A 281 PVLANILEADQEKCWGFDQFFAET 304 (319)
T ss_dssp HHHHHHSCCCTTTSCCHHHHHHHH
T ss_pred HHHHHhccCChhhhccHHHhhhcc
Confidence 899999999999999999999987
No 158
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=99.97 E-value=1e-32 Score=288.70 Aligned_cols=203 Identities=18% Similarity=0.169 Sum_probs=152.6
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++.+++||||+++++ ++..+ .+|+|||| .+++|.+++......+++..++.++.||+.||.|||++|
T Consensus 62 ~~~~e~~~l~~l~h~~iv~~~~-~~~~~----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ 136 (281)
T 1mp8_A 62 KFLQEALTMRQFDHPHIVKLIG-VITEN----PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR 136 (281)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEE-EECSS----SCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCccceEEE-EEccC----ccEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 4447888999999999999999 44332 46899999 888999999666556999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||++.........
T Consensus 137 i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-------------------------------------------- 172 (281)
T 1mp8_A 137 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY-------------------------------------------- 172 (281)
T ss_dssp CCCSCCSGGGEEEEETTEEEECC---------------------------------------------------------
T ss_pred eecccccHHHEEECCCCCEEECccccccccCccccc--------------------------------------------
Confidence 999999999999999999999999987432111000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......+|+.|+|||++.+..++.++|||||||++
T Consensus 173 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l 207 (281)
T 1mp8_A 173 ---------------------------------------------KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCM 207 (281)
T ss_dssp ---------------------------------------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHH
T ss_pred ---------------------------------------------ccccCCCcccccChhhcccCCCCCccCchHHHHHH
Confidence 00012468899999999988899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||...... .....+.....++......+...+|+.+||+.||.+|||+.++++
T Consensus 208 ~ell~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~ 269 (281)
T 1mp8_A 208 WEILMHGVKPFQGVKNN-DVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKA 269 (281)
T ss_dssp HHHHTTSCCTTTTCCGG-GHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHhcCCCCCCcCCHH-HHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 99996 66654433 233344433333322233344569999999999999999999985
No 159
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=99.97 E-value=3.6e-33 Score=296.41 Aligned_cols=215 Identities=14% Similarity=0.157 Sum_probs=156.6
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++||||+++++ ++.++. .+++|||| .|++|.+++......+++.+++.++.||+.||.|||++|
T Consensus 53 ~~~~E~~~l~~l~hp~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ 128 (310)
T 3s95_A 53 TFLKEVKVMRCLEHPNVLKFIG-VLYKDK---RLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMN 128 (310)
T ss_dssp HHHHHHHHHTTCCCTTBCCEEE-EEEETT---EEEEEEECCTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCcCcccEEE-EEecCC---eeEEEEEecCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 4447888999999999999999 554443 57999999 899999999765666999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||.+........... +....
T Consensus 129 ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~-------------------------------~~~~~------ 171 (310)
T 3s95_A 129 IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPE-------------------------------GLRSL------ 171 (310)
T ss_dssp EECSCCSTTSEEECTTSCEEECCCTTCEECC-------------------------------------------------
T ss_pred ccCCCCCcCeEEECCCCCEEEeecccceeccccccccc-------------------------------ccccc------
Confidence 99999999999999999999999998854422210000 00000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
............||+.|+|||++.+..++.++|||||||++
T Consensus 172 ---------------------------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l 212 (310)
T 3s95_A 172 ---------------------------------------KKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVL 212 (310)
T ss_dssp -----------------------------------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHH
T ss_pred ---------------------------------------cccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHH
Confidence 00000001125799999999999999999999999999999
Q ss_pred hhccc---cCCCCchHH----HHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFC---PFSTGEEKT----RTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~----~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||....... ...........++. ..+...+|+.+||+.||.+|||+.++++
T Consensus 213 ~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~li~~~l~~dP~~Rps~~~l~~ 275 (310)
T 3s95_A 213 CEIIGRVNADPDYLPRTMDFGLNVRGFLDRYCPPN---CPPSFFPITVRCCDLDPEKRPSFVKLEH 275 (310)
T ss_dssp HHHHHTCCSSTTTSCBCTTSSBCHHHHHHHTCCTT---CCTTHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHhcCCCCCcchhhhHHHHhhhhhccccccCCCC---CCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 99998 443321100 00001111111221 2244569999999999999999999986
No 160
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=99.97 E-value=1e-32 Score=298.71 Aligned_cols=208 Identities=20% Similarity=0.224 Sum_probs=161.4
Q ss_pred hchhhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCC------------------------
Q 004989 63 RKHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKR------------------------ 116 (720)
Q Consensus 63 r~~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~------------------------ 116 (720)
+..+|..+|.++ +|||||++++ ++.... ..+++|||| .|++|.+++.....
T Consensus 71 ~~~~E~~~l~~l~~hpniv~~~~-~~~~~~--~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (359)
T 3vhe_A 71 ALMSELKILIHIGHHLNVVNLLG-ACTKPG--GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPV 147 (359)
T ss_dssp HHHHHHHHHHHHCCCTTBCCEEE-EECSTT--SCCEEEEECCTTEEHHHHHHTTTTSBCSCC------------------
T ss_pred HHHHHHHHHHhhcCCcceeeeee-eeecCC--CceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccch
Confidence 445788889998 8999999999 444432 246999999 88999999954322
Q ss_pred -----------------------------------------CCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEc
Q 004989 117 -----------------------------------------SVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMS 155 (720)
Q Consensus 117 -----------------------------------------~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~ 155 (720)
.+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~ 227 (359)
T 3vhe_A 148 DLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS 227 (359)
T ss_dssp ------------------------------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC
T ss_pred hhhccccccCccccccccccccccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEc
Confidence 289999999999999999999999999999999999999
Q ss_pred cCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCCCccccc
Q 004989 156 SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTH 235 (720)
Q Consensus 156 ~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~ 235 (720)
.++.+||+|||++....... +.
T Consensus 228 ~~~~~kl~Dfg~a~~~~~~~---------------------------------~~------------------------- 249 (359)
T 3vhe_A 228 EKNVVKICDFGLARDIYKDP---------------------------------DY------------------------- 249 (359)
T ss_dssp GGGCEEECCCGGGSCTTSCT---------------------------------TC-------------------------
T ss_pred CCCcEEEEeccceeeecccc---------------------------------cc-------------------------
Confidence 99999999999884331110 00
Q ss_pred cccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhccc----cCCCC
Q 004989 236 VVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC----PFSTG 311 (720)
Q Consensus 236 ~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt----pf~~~ 311 (720)
.......||+.|+|||++.+..++.++|||||||++|||++ ||...
T Consensus 250 ------------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~ 299 (359)
T 3vhe_A 250 ------------------------------VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 299 (359)
T ss_dssp ------------------------------EEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred ------------------------------hhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCcc
Confidence 00011467999999999998889999999999999999997 66665
Q ss_pred chHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004989 312 EEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 312 ~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~h 361 (720)
.........+.....++......+...+|+.+||++||.+|||+.|+++|
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~ 349 (359)
T 3vhe_A 300 KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 349 (359)
T ss_dssp CCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred chhHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHH
Confidence 44444444554443333333334556699999999999999999999973
No 161
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=99.97 E-value=4.6e-33 Score=299.78 Aligned_cols=206 Identities=16% Similarity=0.242 Sum_probs=137.7
Q ss_pred hcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccC
Q 004989 70 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 147 (720)
Q Consensus 70 ~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDL 147 (720)
.+..+.||||+++++.+.........+++|||| .|++|.+++... ...+++.+++.++.||+.||.|||++||+||||
T Consensus 75 ~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dl 154 (336)
T 3fhr_A 75 HWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDV 154 (336)
T ss_dssp HHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCC
T ss_pred HHHhcCCCChHHHHHHHhhccCCCceEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCC
Confidence 456689999999999433323223458999999 788999999554 346999999999999999999999999999999
Q ss_pred CCCcEEEcc---CCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccc
Q 004989 148 RPSCFVMSS---FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 148 KP~NILl~~---~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
||+|||++. ++.+||+|||++.......
T Consensus 155 kp~NIll~~~~~~~~~kl~Dfg~~~~~~~~~------------------------------------------------- 185 (336)
T 3fhr_A 155 KPENLLYTSKEKDAVLKLTDFGFAKETTQNA------------------------------------------------- 185 (336)
T ss_dssp SGGGEEESCSSTTCCEEECCCTTCEEC-----------------------------------------------------
T ss_pred CHHHEEEEecCCCceEEEeccccceeccccc-------------------------------------------------
Confidence 999999986 4459999888873221100
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhhc
Q 004989 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 304 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eL 304 (720)
.....||+.|+|||++.+..++.++|||||||++|+|
T Consensus 186 -------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l 222 (336)
T 3fhr_A 186 -------------------------------------------LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYIL 222 (336)
T ss_dssp -------------------------------------------------------------CHHHHHHHHHHHHHHHHHH
T ss_pred -------------------------------------------cccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHH
Confidence 0013679999999999888899999999999999999
Q ss_pred cc---cCCCCchHHH---HHHHhhc--CCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 305 FC---PFSTGEEKTR---TMSSLRH--RVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 305 lt---pf~~~~~~~~---~~~~l~~--~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
++ ||........ ....+.. ..++......+ +...+||.+||+.||.+|||+.|+|+||||+..
T Consensus 223 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 294 (336)
T 3fhr_A 223 LCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQS 294 (336)
T ss_dssp HHSSCCC---------------------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTG
T ss_pred HHCCCCCCCccchhhhhhHHHhhhccccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcCcccccc
Confidence 99 5544322111 0111111 12222222233 445599999999999999999999999999875
No 162
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=99.97 E-value=1.7e-32 Score=288.90 Aligned_cols=209 Identities=16% Similarity=0.107 Sum_probs=155.2
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++||||+++++.++..+. ..+++|||| .+++|.+++......+++..++.++.||+.||.|||++|
T Consensus 57 ~~~~E~~~l~~l~h~~iv~~~~~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ 134 (295)
T 3ugc_A 57 DFEREIEILKSLQHDNIVKYKGVCYSAGR--RNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR 134 (295)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEEEECHHHH--TSCEEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCEeeEEEEEecCCC--CceEEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcCC
Confidence 44578889999999999999994333221 247999999 799999999665556999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||++......... +
T Consensus 135 ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~--------------------------------~----------- 171 (295)
T 3ugc_A 135 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEF--------------------------------F----------- 171 (295)
T ss_dssp CCCSCCSGGGEEEEETTEEEECCCCSCC----------------------------------------------------
T ss_pred cccCCCCHhhEEEcCCCeEEEccCcccccccCCcce--------------------------------e-----------
Confidence 999999999999999999999999988543211000 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
.......+|+.|+|||++.+..++.++|||||||++
T Consensus 172 --------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l 207 (295)
T 3ugc_A 172 --------------------------------------------KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVL 207 (295)
T ss_dssp ------------------------------------------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred --------------------------------------------eeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHH
Confidence 000113567889999999988899999999999999
Q ss_pred hhccccCCCCchH------------------HHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFCPFSTGEEK------------------TRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLltpf~~~~~~------------------~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||+++..+.... ......+.....++......+...+|+.+||+.||.+|||+.|+++
T Consensus 208 ~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~ 284 (295)
T 3ugc_A 208 YELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL 284 (295)
T ss_dssp HHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHHhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 9999932221111 0122222222222222223344569999999999999999999985
No 163
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=99.97 E-value=1.8e-32 Score=293.80 Aligned_cols=204 Identities=15% Similarity=0.117 Sum_probs=159.9
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++++++||||+++++ ++... ..++++|| .+++|.+++......+++..++.|+.||+.||.|||++|
T Consensus 63 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~----~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ 137 (327)
T 3poz_A 63 EILDEAYVMASVDNPHVCRLLG-ICLTS----TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 137 (327)
T ss_dssp HHHHHHHHHHHCCBTTBCCEEE-EEESS----SEEEEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCEeEEEE-EEecC----CeEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence 4457888999999999999999 55544 25788888 999999999766667999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||+++..+.....
T Consensus 138 ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~-------------------------------------------- 173 (327)
T 3poz_A 138 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE-------------------------------------------- 173 (327)
T ss_dssp CCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTCC---------------------------------------------
T ss_pred eeCCCCChheEEECCCCCEEEccCcceeEccCCccc--------------------------------------------
Confidence 999999999999999999999999987432211000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
.......||+.|+|||++.+..++.++|||||||++
T Consensus 174 --------------------------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il 209 (327)
T 3poz_A 174 --------------------------------------------YHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTV 209 (327)
T ss_dssp --------------------------------------------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred --------------------------------------------ccccCCCccccccChHHhccCCCCchhhhhhhHHHH
Confidence 000113568899999999999899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||...... .....+.....++......+...+|+.+||+.||.+|||+.++++
T Consensus 210 ~ellt~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~ 271 (327)
T 3poz_A 210 WELMTFGSKPYDGIPAS-EISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELII 271 (327)
T ss_dssp HHHHTTSCCTTTTCCGG-GHHHHHHTTCCCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHH
T ss_pred HHHHhcCCCCccCCCHH-HHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 99998 56554333 233334433333333334455669999999999999999999986
No 164
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=99.97 E-value=2.8e-32 Score=282.90 Aligned_cols=204 Identities=15% Similarity=0.166 Sum_probs=159.6
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++.+++||||+++++ ++.+.. .+++|||| .+++|.+++...+..+++.+++.++.||+.||.|||++||
T Consensus 50 ~~~E~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i 125 (268)
T 3sxs_A 50 FFQEAQTMMKLSHPKLVKFYG-VCSKEY---PIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQF 125 (268)
T ss_dssp HHHHHHHHHHCCCTTBCCEEE-EECSSS---SEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHhCCCCCEeeEEE-EEccCC---ceEEEEEccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 347778999999999999999 554443 57999999 7999999996655569999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.++|+|||.+.........
T Consensus 126 ~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~--------------------------------------------- 160 (268)
T 3sxs_A 126 IHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYV--------------------------------------------- 160 (268)
T ss_dssp EESSCSGGGEEECTTCCEEECCTTCEEECCTTCEE---------------------------------------------
T ss_pred ecCCcCcceEEECCCCCEEEccCccceecchhhhh---------------------------------------------
Confidence 99999999999999999999999987432111000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......+|+.|+|||++.+..++.++|||||||++|
T Consensus 161 --------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ 196 (268)
T 3sxs_A 161 --------------------------------------------SSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMW 196 (268)
T ss_dssp --------------------------------------------ECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHH
T ss_pred --------------------------------------------cccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHH
Confidence 000124678899999999888999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004989 303 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~h 361 (720)
+|++ ||....... ....+.....+.......+...+|+.+||+.||.+|||+.+++++
T Consensus 197 ~l~~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~ 258 (268)
T 3sxs_A 197 EVFSLGKMPYDLYTNSE-VVLKVSQGHRLYRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSS 258 (268)
T ss_dssp HHHTTTCCTTTTSCHHH-HHHHHHTTCCCCCCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred HHHcCCCCCccccChHH-HHHHHHcCCCCCCCCcChHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 9997 666554443 333333332222222233455699999999999999999999973
No 165
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=99.97 E-value=2.2e-32 Score=283.99 Aligned_cols=200 Identities=17% Similarity=0.220 Sum_probs=153.5
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++..++||||+++++ ++.... .+++|||| .|++|.+++.. ..+++..++.++.||+.||.|||++|
T Consensus 52 ~~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~i~~~l~~~l~~lH~~~ 125 (271)
T 3dtc_A 52 NVRQEAKLFAMLKHPNIIALRG-VCLKEP---NLCLVMEFARGGPLNRVLSG--KRIPPDILVNWAVQIARGMNYLHDEA 125 (271)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EECCC-----CEEEEECCTTEEHHHHHTS--SCCCHHHHHHHHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHhcCCCCEeeEEE-EEecCC---ceEEEEEcCCCCCHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3447778999999999999999 555443 46999999 89999999853 34999999999999999999999999
Q ss_pred ---ceeccCCCCcEEEcc--------CCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhccccccc
Q 004989 142 ---IVVHNVRPSCFVMSS--------FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDL 210 (720)
Q Consensus 142 ---IvHrDLKP~NILl~~--------~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Df 210 (720)
|+||||||+|||++. ++.++|+|||.+.......
T Consensus 126 ~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~----------------------------------- 170 (271)
T 3dtc_A 126 IVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTT----------------------------------- 170 (271)
T ss_dssp SSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC-------------------------------------------
T ss_pred CCceeecCCchHHEEEecccccccccCcceEEccCCccccccccc-----------------------------------
Confidence 899999999999985 6789998888773321100
Q ss_pred ccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCc
Q 004989 211 QLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSC 290 (720)
Q Consensus 211 gla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~ 290 (720)
.....||+.|+|||.+.+..++.
T Consensus 171 ---------------------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~ 193 (271)
T 3dtc_A 171 ---------------------------------------------------------KMSAAGAYAWMAPEVIRASMFSK 193 (271)
T ss_dssp --------------------------------------------------------------CCGGGSCHHHHHHCCCSH
T ss_pred ---------------------------------------------------------ccCCCCccceeCHHHhccCCCCc
Confidence 00136799999999999888999
Q ss_pred cccchhhhchhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcC
Q 004989 291 ASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 291 ~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~h 361 (720)
++|||||||++|+|++ ||................ ........++ ...+|+.+||+.||.+|||+.|++++
T Consensus 194 ~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 267 (271)
T 3dtc_A 194 GSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNK-LALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQ 267 (271)
T ss_dssp HHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHTSC-CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred hhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhcCC-CCCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHH
Confidence 9999999999999999 776655543333333333 3333333444 45599999999999999999999863
No 166
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=99.97 E-value=5.1e-32 Score=289.01 Aligned_cols=215 Identities=12% Similarity=0.059 Sum_probs=154.2
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCC---CcEEEEEec-CCCCHHHHHhC-----CCCCCCHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAI---DPFVHAIEW-GDVSLRQWLDK-----PKRSVDVYECLHIFRQIVEI 133 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~---~~~~lv~E~-~ggsL~~~L~~-----~~~~l~~~~~~~i~~QIl~a 133 (720)
+..+|..++.+++||||+++++ ++...... ...+++||| .+++|.+++.. ....+++.+++.++.||+.|
T Consensus 71 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~a 149 (323)
T 3qup_A 71 EFLREAACMKEFDHPHVAKLVG-VSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACG 149 (323)
T ss_dssp HHHHHHHHHTTCCCTTBCCCCE-EEECC-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCceehhhc-eeeccccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHH
Confidence 4458888999999999999999 44333221 235899999 89999999932 12258999999999999999
Q ss_pred HHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccc
Q 004989 134 VYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLV 213 (720)
Q Consensus 134 L~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla 213 (720)
|.|||++||+||||||+|||++.++.+||+|||++.........
T Consensus 150 l~~LH~~~ivH~Dikp~NIli~~~~~~kl~Dfg~a~~~~~~~~~------------------------------------ 193 (323)
T 3qup_A 150 MEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYY------------------------------------ 193 (323)
T ss_dssp HHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC----------------------------------------------
T ss_pred HHHHHcCCcccCCCCcceEEEcCCCCEEEeeccccccccccccc------------------------------------
Confidence 99999999999999999999999999999999988433111000
Q ss_pred cCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCcccc
Q 004989 214 TAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASD 293 (720)
Q Consensus 214 ~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sD 293 (720)
.......+|+.|+|||++.+..++.++|
T Consensus 194 ----------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~D 221 (323)
T 3qup_A 194 ----------------------------------------------------RQGCASKLPVKWLALESLADNLYTVHSD 221 (323)
T ss_dssp -----------------------------------------------------------CCGGGCCHHHHHHCCCCHHHH
T ss_pred ----------------------------------------------------cccccccCcccccCchhhcCCCCCCccc
Confidence 0000134688999999999988999999
Q ss_pred chhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCC-------hHHHHcCc
Q 004989 294 IYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-------MGELLQSE 362 (720)
Q Consensus 294 IwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpt-------a~eiL~hp 362 (720)
||||||++|||++ ||...... .....+.....++......+...+|+.+||+.||.+||| +++++.||
T Consensus 222 i~slG~il~ell~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~ 300 (323)
T 3qup_A 222 VWAFGVTMWEIMTRGQTPYAGIENA-EIYNYLIGGNRLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHL 300 (323)
T ss_dssp HHHHHHHHHHHHTTSCCTTTTCCGG-GHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred hhhHHHHHHHHHhCCCCCccccChH-HHHHHHhcCCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 9999999999998 55554433 333334333333333333445569999999999999999 77778899
Q ss_pred ccCCC
Q 004989 363 FLNEP 367 (720)
Q Consensus 363 ~~~~~ 367 (720)
|+...
T Consensus 301 ~~~~~ 305 (323)
T 3qup_A 301 SVLST 305 (323)
T ss_dssp -----
T ss_pred hhcCC
Confidence 98875
No 167
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=99.97 E-value=1.1e-31 Score=283.71 Aligned_cols=215 Identities=16% Similarity=0.185 Sum_probs=162.5
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHh-CCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLD-KPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~-~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++.+++||||+++++.++ .. ....+|+||||..++|.+++. .....+++..++.++.||+.||.|||++|
T Consensus 52 ~~~~E~~~l~~l~h~~i~~~~~~~~-~~-~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ 129 (305)
T 2wtk_C 52 NVKKEIQLLRRLRHKNVIQLVDVLY-NE-EKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQG 129 (305)
T ss_dssp HHHHHHHHHTTCCCTTBCCEEEEEE-CC----CEEEEEECCSEEHHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhcCCCCeeEEEEEEE-cC-CCCeEEEEehhccCCHHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3447788999999999999999433 22 223689999995566888884 33456999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.++|+|||.+.........
T Consensus 130 i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~-------------------------------------------- 165 (305)
T 2wtk_C 130 IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAAD-------------------------------------------- 165 (305)
T ss_dssp EECSCCSGGGEEECTTCCEEECCCTTCEECCTTCSS--------------------------------------------
T ss_pred eeecCCCcccEEEcCCCcEEeeccccccccCccccc--------------------------------------------
Confidence 999999999999999999999999887432111000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC--CCccccchhhhc
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP--VSCASDIYRLGV 299 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~--~s~~sDIwSLGv 299 (720)
.......||+.|+|||++.+.. ++.++|||||||
T Consensus 166 --------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~ 201 (305)
T 2wtk_C 166 --------------------------------------------DTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGV 201 (305)
T ss_dssp --------------------------------------------CEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHH
T ss_pred --------------------------------------------cccccCCCCCCCcChhhccCcccCCcchhhHHHHHH
Confidence 0001136899999999998754 478999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004989 300 LLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
++|||++ ||...... .....+.....+ ......+...+||.+||+.||.+|||+.|+++||||+....
T Consensus 202 il~~l~~g~~p~~~~~~~-~~~~~i~~~~~~-~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~~ 272 (305)
T 2wtk_C 202 TLYNITTGLYPFEGDNIY-KLFENIGKGSYA-IPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKHP 272 (305)
T ss_dssp HHHHHHHSSCSCCCSSHH-HHHHHHHHCCCC-CCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHSHHHHSCCC
T ss_pred HHHHHHhCCCCCCCchHH-HHHHHHhcCCCC-CCCccCHHHHHHHHHHccCChhhCCCHHHHhcCcccccCCC
Confidence 9999999 66654433 344444443222 11122344569999999999999999999999999987644
No 168
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=99.97 E-value=3.6e-32 Score=286.95 Aligned_cols=210 Identities=17% Similarity=0.126 Sum_probs=158.9
Q ss_pred hhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 62 LRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 62 ~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
.+..+|..+|.+++||||+++++ ++.... ...++++||| .+++|.+++......+++..++.++.||+.||.|||++
T Consensus 68 ~~~~~E~~~l~~l~h~~i~~~~~-~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~ 145 (302)
T 4e5w_A 68 ADLKKEIEILRNLYHENIVKYKG-ICTEDG-GNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSR 145 (302)
T ss_dssp HHHHHHHHHHHTCCCTTBCCEEE-EEEC----CCEEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhCCCCCeeeeee-EEecCC-CceEEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcC
Confidence 34457888999999999999999 444332 2358999999 78999999955555699999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+|||++.++.++|+|||.+......... +
T Consensus 146 ~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~--------------------------------~---------- 183 (302)
T 4e5w_A 146 QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEY--------------------------------Y---------- 183 (302)
T ss_dssp TEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCCE--------------------------------E----------
T ss_pred CcccCCCchheEEEcCCCCEEECcccccccccCCCcc--------------------------------e----------
Confidence 9999999999999999999999999988443221000 0
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhch
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
.......||+.|+|||++.+..++.++|||||||+
T Consensus 184 ---------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i 218 (302)
T 4e5w_A 184 ---------------------------------------------TVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVT 218 (302)
T ss_dssp ---------------------------------------------ECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHH
T ss_pred ---------------------------------------------eccCCCCCCccccCCeeecCCCCCcchhHHHHHHH
Confidence 00011357889999999998889999999999999
Q ss_pred hhhccccCCC-----------------CchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 301 LFELFCPFST-----------------GEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 301 l~eLltpf~~-----------------~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
+|+|+++..+ ..........+......+......+...+|+.+||+.||.+|||+.++++
T Consensus 219 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 295 (302)
T 4e5w_A 219 LHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIE 295 (302)
T ss_dssp HHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred HHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHhccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHH
Confidence 9999993221 12222333333333333322233345569999999999999999999986
No 169
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=99.97 E-value=1.7e-32 Score=299.15 Aligned_cols=212 Identities=14% Similarity=0.146 Sum_probs=161.3
Q ss_pred chhhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC------CCCCHHHHHHHHHHHHH
Q 004989 60 FELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK------RSVDVYECLHIFRQIVE 132 (720)
Q Consensus 60 ~~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~------~~l~~~~~~~i~~QIl~ 132 (720)
...+..+|..+|.+++|||||++++ ++.... ..|+|||| .|++|.+++.... ..+++.+++.++.||+.
T Consensus 117 ~~~~~~~E~~~l~~l~hpnIv~~~~-~~~~~~---~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~ 192 (367)
T 3l9p_A 117 DELDFLMEALIISKFNHQNIVRCIG-VSLQSL---PRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 192 (367)
T ss_dssp HHHHHHHHHHHHHHCCCTTBCCEEE-EECSSS---SCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhCCCCCCCeEEE-EEecCC---CCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHH
Confidence 3335557888999999999999999 554443 45999999 7999999994322 35899999999999999
Q ss_pred HHHHHHHCCceeccCCCCcEEEccCC---ceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccc
Q 004989 133 IVYAAHSQGIVVHNVRPSCFVMSSFN---HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRRED 209 (720)
Q Consensus 133 aL~yLHs~gIvHrDLKP~NILl~~~~---~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~D 209 (720)
||.|||++||+||||||+|||++.++ .+||+|||+++..... .
T Consensus 193 aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~kL~DFG~a~~~~~~----------------------------------~ 238 (367)
T 3l9p_A 193 GCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA----------------------------------G 238 (367)
T ss_dssp HHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHHH----------------------------------S
T ss_pred HHHHHHhCCeeCCCCChhhEEEecCCCCceEEECCCccccccccc----------------------------------c
Confidence 99999999999999999999999555 4999988887321000 0
Q ss_pred cccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCC
Q 004989 210 LQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVS 289 (720)
Q Consensus 210 fgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s 289 (720)
. ........||+.|+|||++.+..++
T Consensus 239 ~------------------------------------------------------~~~~~~~~~t~~y~aPE~~~~~~~~ 264 (367)
T 3l9p_A 239 Y------------------------------------------------------YRKGGCAMLPVKWMPPEAFMEGIFT 264 (367)
T ss_dssp S------------------------------------------------------CTTCCGGGSCGGGCCHHHHHHCCCC
T ss_pred c------------------------------------------------------cccCCCcCCcccEECHHHhcCCCCC
Confidence 0 0000114679999999999888899
Q ss_pred ccccchhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004989 290 CASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 290 ~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
.++|||||||++|||++ ||...... .....+.....++......+...+|+.+||+.||.+|||+.+|+++.++
T Consensus 265 ~~~DvwslG~il~ellt~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~ 342 (367)
T 3l9p_A 265 SKTDTWSFGVLLWEIFSLGYMPYPSKSNQ-EVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEY 342 (367)
T ss_dssp HHHHHHHHHHHHHHHHTTSCCSSTTCCHH-HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHhCCCCCCCCCCHH-HHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence 99999999999999997 56554443 4444444443333222233445699999999999999999999987654
No 170
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=99.97 E-value=3.9e-32 Score=285.12 Aligned_cols=207 Identities=18% Similarity=0.199 Sum_probs=161.5
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++.+++||||+++++ ++.... .+|++||| .+++|.+++.... .+++.+++.++.||+.||.|||++|
T Consensus 67 ~~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH~~~ 141 (287)
T 2wei_A 67 TILREVELLKKLDHPNIMKLFE-ILEDSS---SFYIVGELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMHKHN 141 (287)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEE-EEECSS---EEEEEECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhccCCCccEEEE-EEeCCC---eEEEEEEccCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 4447888999999999999999 554443 67999999 8999999985433 4999999999999999999999999
Q ss_pred ceeccCCCCcEEEccC---CceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCC
Q 004989 142 IVVHNVRPSCFVMSSF---NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 142 IvHrDLKP~NILl~~~---~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
|+||||||+||+++.+ +.+||+|||.+.......
T Consensus 142 i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~------------------------------------------- 178 (287)
T 2wei_A 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT------------------------------------------- 178 (287)
T ss_dssp CCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCS-------------------------------------------
T ss_pred eeccCCChhhEEEecCCCcccEEEeccCcceeecCCC-------------------------------------------
Confidence 9999999999999754 469999888774321110
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhh
Q 004989 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
......||+.|+|||++.+. ++.++||||||
T Consensus 179 ------------------------------------------------~~~~~~~~~~y~aPE~~~~~-~~~~~Di~slG 209 (287)
T 2wei_A 179 ------------------------------------------------KMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAG 209 (287)
T ss_dssp ------------------------------------------------SCSCHHHHHTTCCHHHHTTC-CCTHHHHHHHH
T ss_pred ------------------------------------------------ccccccCcccccChHHhcCC-CCCchhhHhHH
Confidence 00013578999999999765 89999999999
Q ss_pred chhhhccc---cCCCCchHHHHHHHhhcCCCCc---cccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 299 VLLFELFC---PFSTGEEKTRTMSSLRHRVLPP---QLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~~p~---~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|++|+|++ ||...... .....+..+..+. ......+...+||.+||++||.+|||+.|+|+||||++.
T Consensus 210 ~~l~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~~~~~ 283 (287)
T 2wei_A 210 VILYILLSGTPPFYGKNEY-DILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKY 283 (287)
T ss_dssp HHHHHHHHSSCSSCCSSHH-HHHHHHHHCCCCCCSGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHHH
T ss_pred HHHHHHHhCCCCCCCCCHH-HHHHHHHcCCCCCCchhhhhcCHHHHHHHHHHcccChhhCcCHHHHhcCHHHhcc
Confidence 99999999 66655443 3444444443322 222233445699999999999999999999999999764
No 171
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=99.97 E-value=4.5e-32 Score=297.15 Aligned_cols=205 Identities=19% Similarity=0.227 Sum_probs=153.6
Q ss_pred hhhhhcccCC-CC-----CceecccceeecCCCCCcEEEEEecCCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHH
Q 004989 66 SDGVELTHGD-HL-----RNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 66 ~e~~~L~~l~-Hp-----nIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
+|..++..+. |+ +|+++++ ++.... .+|+||||.+++|.+++... ...+++..++.++.||+.||.|||
T Consensus 99 ~e~~~l~~l~~~~~~~~~~iv~~~~-~~~~~~---~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH 174 (382)
T 2vx3_A 99 IEVRLLELMNKHDTEMKYYIVHLKR-HFMFRN---HLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLA 174 (382)
T ss_dssp HHHHHHHHHHHCSSGGGGGBCCEEE-EEEETT---EEEEEEECCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcccccceeEEEeee-eeccCC---ceEEEEecCCCCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhc
Confidence 4555665554 44 4888888 444443 68999999777999999543 345999999999999999999999
Q ss_pred --HCCceeccCCCCcEEEc--cCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhccccccccccc
Q 004989 139 --SQGIVVHNVRPSCFVMS--SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVT 214 (720)
Q Consensus 139 --s~gIvHrDLKP~NILl~--~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~ 214 (720)
..|||||||||+|||++ .++.+||+|||++...+..
T Consensus 175 ~~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~~~~~---------------------------------------- 214 (382)
T 2vx3_A 175 TPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQR---------------------------------------- 214 (382)
T ss_dssp STTTCEECCCCSGGGEEESSTTSCCEEECCCTTCEETTCC----------------------------------------
T ss_pred cCCCCEEcCCCCcccEEEecCCCCcEEEEeccCceecccc----------------------------------------
Confidence 57999999999999995 4778999998887432111
Q ss_pred CCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccc
Q 004989 215 APTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDI 294 (720)
Q Consensus 215 ~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDI 294 (720)
....+||+.|+|||++.+..++.++||
T Consensus 215 -----------------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~Di 241 (382)
T 2vx3_A 215 -----------------------------------------------------IYQYIQSRFYRSPEVLLGMPYDLAIDM 241 (382)
T ss_dssp -----------------------------------------------------CCSSCSCGGGCCHHHHTTCCCCTHHHH
T ss_pred -----------------------------------------------------cccccCCccccChHHHcCCCCCcHHHH
Confidence 011468999999999999999999999
Q ss_pred hhhhchhhhccc---cCCCCchHHHHHHHhhc-CCCCcccccc-------------------------------------
Q 004989 295 YRLGVLLFELFC---PFSTGEEKTRTMSSLRH-RVLPPQLLLK------------------------------------- 333 (720)
Q Consensus 295 wSLGvll~eLlt---pf~~~~~~~~~~~~l~~-~~~p~~~~~~------------------------------------- 333 (720)
|||||++|||++ ||............+.. +..++.....
T Consensus 242 wSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 321 (382)
T 2vx3_A 242 WSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLH 321 (382)
T ss_dssp HHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTCTTHHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHH
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhHHHHHHHHhccccccccccccccccccCCcchhhHH
Confidence 999999999999 77665544332222211 1111110000
Q ss_pred ------------------------CchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 334 ------------------------FPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 334 ------------------------~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
.+...+||.+||++||++|||+.|+|+||||+..
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~Rpta~e~L~hp~f~~~ 379 (382)
T 2vx3_A 322 NILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKKT 379 (382)
T ss_dssp HHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGCC-
T ss_pred HHhhccccCCCccccccccccchhhHHHHHHHHHhcCCChhhCCCHHHHhcCcccccC
Confidence 0144699999999999999999999999999875
No 172
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=99.97 E-value=5e-32 Score=291.88 Aligned_cols=204 Identities=14% Similarity=0.188 Sum_probs=151.4
Q ss_pred hhhhhcccCCCCC------ceecccceeecCCCCCcEEEEEecCCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHH
Q 004989 66 SDGVELTHGDHLR------NQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 66 ~e~~~L~~l~Hpn------IV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
+|..++.++.|++ |+.+++ ++.... .+|+||||.+++|.+++.. ....+++.+++.++.||+.||.|||
T Consensus 65 ~E~~~l~~l~~~~~~~~~~~~~~~~-~~~~~~---~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH 140 (355)
T 2eu9_A 65 LEINVLKKIKEKDKENKFLCVLMSD-WFNFHG---HMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLH 140 (355)
T ss_dssp HHHHHHHHHHHHCTTSCSCBCCEEE-EEEETT---EEEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhcCCCCceeEEEeee-eeeeCC---eEEEEEeccCCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 5666777777666 888888 454443 6899999988888888844 3356999999999999999999999
Q ss_pred HCCceeccCCCCcEEEc-------------------cCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhh
Q 004989 139 SQGIVVHNVRPSCFVMS-------------------SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDML 199 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~-------------------~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (720)
++||+||||||+|||+. .++.+||+|||++...
T Consensus 141 ~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~---------------------------- 192 (355)
T 2eu9_A 141 ENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFD---------------------------- 192 (355)
T ss_dssp TTTEECCCCCGGGEEESCCCEEEEECCC-CCCEEEESCCCEEECCCTTCEET----------------------------
T ss_pred HCCcccCCCCHHHEEEecccccccccccccccccccCCCcEEEeecCccccc----------------------------
Confidence 99999999999999994 4455666555554211
Q ss_pred hhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccC
Q 004989 200 QRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYAS 279 (720)
Q Consensus 200 ~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~A 279 (720)
... .....||+.|+|
T Consensus 193 -----------------~~~------------------------------------------------~~~~~gt~~y~a 207 (355)
T 2eu9_A 193 -----------------HEH------------------------------------------------HTTIVATRHYRP 207 (355)
T ss_dssp -----------------TSC------------------------------------------------CCSSCSCGGGCC
T ss_pred -----------------ccc------------------------------------------------ccCCcCCCcccC
Confidence 000 011468999999
Q ss_pred cccccCCCCCccccchhhhchhhhccc---cCCCCchHHH--HHHHhhcCCCCccccc----------------------
Q 004989 280 PEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTR--TMSSLRHRVLPPQLLL---------------------- 332 (720)
Q Consensus 280 PE~l~~~~~s~~sDIwSLGvll~eLlt---pf~~~~~~~~--~~~~l~~~~~p~~~~~---------------------- 332 (720)
||++.+..++.++|||||||++|||++ ||........ .+..+. +.+|..+..
T Consensus 208 PE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (355)
T 2eu9_A 208 PEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKIL-GPIPSHMIHRTRKQKYFYKGGLVWDENSSDG 286 (355)
T ss_dssp HHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHH-CCCCHHHHHHCSCGGGEETTEECCCTTSHHH
T ss_pred CeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHc-CCCcHHHhhhccchhhhcccccccccccchh
Confidence 999999889999999999999999999 6665443321 122221 222221100
Q ss_pred -------------------cCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 333 -------------------KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 333 -------------------~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
..+...+||.+||++||.+|||+.|+|+||||+..
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~ 340 (355)
T 2eu9_A 287 RYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGL 340 (355)
T ss_dssp HHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGGC
T ss_pred ccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhcChhhcCC
Confidence 01234599999999999999999999999999986
No 173
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=99.97 E-value=8.1e-32 Score=283.47 Aligned_cols=209 Identities=14% Similarity=0.078 Sum_probs=160.9
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++.+++||||+++++ ++.+... ..+++||| .+++|.+++......+++.+++.++.||+.||.|||++|
T Consensus 68 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~~--~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ 144 (298)
T 3pls_A 68 AFLREGLLMRGLNHPNVLALIG-IMLPPEG--LPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQK 144 (298)
T ss_dssp HHHHHHHHHHTCCCTTBCCCCE-EECCSSS--CCEEEECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCeeeEEE-EEecCCC--CcEEEEecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 4447888999999999999999 5544332 34899999 899999999776677999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||.+......... .
T Consensus 145 i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~-------------------------------~------------ 181 (298)
T 3pls_A 145 FVHRDLAARNCMLDESFTVKVADFGLARDILDREYY-------------------------------S------------ 181 (298)
T ss_dssp CCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGGG-------------------------------C------------
T ss_pred cccCCCCcceEEEcCCCcEEeCcCCCcccccCCccc-------------------------------c------------
Confidence 999999999999999999999999988543211000 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
........+|+.|+|||.+.+..++.++|||||||++
T Consensus 182 -------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 218 (298)
T 3pls_A 182 -------------------------------------------VQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLL 218 (298)
T ss_dssp -------------------------------------------SCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHH
T ss_pred -------------------------------------------cccCcCCCCCccccChhhhccCCCChhhchhhHHHHH
Confidence 0000113578999999999998899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|+|++ |+............+.....++......+...+|+.+||+.||.+|||+.++++
T Consensus 219 ~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~ 280 (298)
T 3pls_A 219 WELLTRGAPPYRHIDPFDLTHFLAQGRRLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVG 280 (298)
T ss_dssp HHHHHTSCCTTTTSCGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHhhCCCCCCccCCHHHHHHHhhcCCCCCCCccchHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 99999 333333333344444443333332223344569999999999999999999986
No 174
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=99.97 E-value=6.1e-32 Score=284.84 Aligned_cols=207 Identities=16% Similarity=0.136 Sum_probs=158.4
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++.+++||||+++++.++..+. ..+++||| .+++|.+++......+++.+++.++.||+.||.|||++|
T Consensus 72 ~~~~E~~~l~~l~h~~iv~~~~~~~~~~~---~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~~ 148 (298)
T 3f66_A 72 QFLTEGIIMKDFSHPNVLSLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 148 (298)
T ss_dssp HHHHHHHHHHTCCCTTBCCCCEEECCSSS---CCEEEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCEeeeeeEEEcCCC---ceEEEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 44578889999999999999994344332 46899999 888999999776667999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.+||+|||.+......... .
T Consensus 149 i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~-------------------------------~------------ 185 (298)
T 3f66_A 149 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYY-------------------------------S------------ 185 (298)
T ss_dssp CCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGGGC-------------------------------B------------
T ss_pred ccCCCCchheEEECCCCCEEECcccccccccccchh-------------------------------c------------
Confidence 999999999999999999999999988543211000 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
........||+.|+|||.+.+..++.++|||||||++
T Consensus 186 -------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 222 (298)
T 3f66_A 186 -------------------------------------------VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLL 222 (298)
T ss_dssp -------------------------------------------C-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred -------------------------------------------cccccCCCCCccccChHHhcCCCCChHHHHHHHHHHH
Confidence 0000113578999999999988899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|+|++ ||...... .....+.....+.. +..+| ...+|+.+||++||.+|||+.|+++
T Consensus 223 ~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~l~~li~~~l~~~p~~Rps~~ell~ 284 (298)
T 3f66_A 223 WELMTRGAPPYPDVNTF-DITVYLLQGRRLLQ-PEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 284 (298)
T ss_dssp HHHHTTSCCSSTTSCTT-THHHHHHTTCCCCC-CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHhCCCCCCccCCHH-HHHHHHhcCCCCCC-CccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 99998 44443332 22222322222222 22333 4559999999999999999999986
No 175
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=99.97 E-value=6.6e-32 Score=289.64 Aligned_cols=205 Identities=15% Similarity=0.107 Sum_probs=157.9
Q ss_pred hhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 62 LRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 62 ~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
.+..+|..+|.+++||||+++++ ++... ..++++|| .+++|.+++......+++..++.|+.||+.||.|||++
T Consensus 62 ~~~~~E~~~l~~l~hp~iv~~~~-~~~~~----~~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~ 136 (327)
T 3lzb_A 62 KEILDEAYVMASVDNPHVCRLLG-ICLTS----TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 136 (327)
T ss_dssp HHHHHHHHHHTTCCBTTBCCCCE-EEESS----SEEEEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhCCCCCeeEEEE-EEecC----CceEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhC
Confidence 34457888999999999999999 55544 26788888 99999999976666699999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+|||++.++.+||+|||++...+..... .
T Consensus 137 ~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~~~--------------------------------~---------- 174 (327)
T 3lzb_A 137 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE--------------------------------Y---------- 174 (327)
T ss_dssp TCCCSCCCGGGEEEEETTEEEECCTTC-----------------------------------------------------
T ss_pred CCcCCCCCHHHEEEcCCCCEEEccCcceeEccCcccc--------------------------------c----------
Confidence 9999999999999999999999999988543221000 0
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhch
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
......||+.|+|||++.+..++.++|||||||+
T Consensus 175 ----------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~i 208 (327)
T 3lzb_A 175 ----------------------------------------------HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVT 208 (327)
T ss_dssp ---------------------------------------------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHH
T ss_pred ----------------------------------------------cccCCCccccccCHHHHcCCCCChHHHHHHHHHH
Confidence 0001356889999999999889999999999999
Q ss_pred hhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 301 LFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 301 l~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
+|||++ ||...... .....+.....++......+...+|+.+||+.||.+|||+.|+++
T Consensus 209 l~ell~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 271 (327)
T 3lzb_A 209 VWELMTFGSKPYDGIPAS-EISSILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELII 271 (327)
T ss_dssp HHHHHTTSCCTTTTCCGG-GHHHHHHTTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHCCCCCCCCCCHH-HHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 999998 56554333 233344444333333334455669999999999999999999986
No 176
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=99.97 E-value=4.1e-32 Score=288.45 Aligned_cols=207 Identities=16% Similarity=0.185 Sum_probs=154.0
Q ss_pred hhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-Ccee
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ-GIVV 144 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~-gIvH 144 (720)
.+..++..++||||+++++ ++.... .+|+||||.++.+..++......+++..++.++.||+.||.|||++ ||+|
T Consensus 73 ~~~~~~~~~~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H 148 (318)
T 2dyl_A 73 DLDVVLKSHDCPYIVQCFG-TFITNT---DVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIH 148 (318)
T ss_dssp HHHHHHHTTTCTTBCCEEE-EEECSS---EEEEEECCCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_pred HHHHHHHhcCCCceeeEEE-EEecCC---cEEEEEeccCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhCCEEe
Confidence 3344678899999999999 554443 6899999987777776654445699999999999999999999995 9999
Q ss_pred ccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccc
Q 004989 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+||+++.++.+||+|||.+.......
T Consensus 149 ~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~------------------------------------------------- 179 (318)
T 2dyl_A 149 RDVKPSNILLDERGQIKLCDFGISGRLVDDK------------------------------------------------- 179 (318)
T ss_dssp CCCCGGGEEECTTSCEEECCCTTC--------------------------------------------------------
T ss_pred CCCCHHHEEECCCCCEEEEECCCchhccCCc-------------------------------------------------
Confidence 9999999999999999999998873321100
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCccccc-----CCCCCccccchhhhc
Q 004989 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-----GAPVSCASDIYRLGV 299 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~-----~~~~s~~sDIwSLGv 299 (720)
......||+.|+|||++. +..++.++|||||||
T Consensus 180 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~ 217 (318)
T 2dyl_A 180 ------------------------------------------AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGI 217 (318)
T ss_dssp -------------------------------------------------CCTTCCHHHHC--------CCTHHHHHHHHH
T ss_pred ------------------------------------------cccccCCCccccChhhcccccccccCCccccchhhHHH
Confidence 000136799999999995 445899999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcCCCCcc--ccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 300 LLFELFC---PFSTGEEKTRTMSSLRHRVLPPQ--LLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~--~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
++|||++ ||.........+..+.....+.. .....+...+||.+||+.||.+|||+.++++||||+..
T Consensus 218 il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~ 290 (318)
T 2dyl_A 218 SLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIKRY 290 (318)
T ss_dssp HHHHHHHSSCTTTTCCSHHHHHHHHHHSCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHHH
T ss_pred HHHHHHhCCCCCCCCCccHHHHHHHhccCCCCCCccCCCCHHHHHHHHHHccCChhHCcCHHHHhhCHHHHhc
Confidence 9999999 77664444344444443322211 11223455699999999999999999999999999754
No 177
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=99.97 E-value=4.6e-32 Score=283.65 Aligned_cols=204 Identities=16% Similarity=0.204 Sum_probs=160.4
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++.+++||||+++++ ++.+.. .+|+|||| .+++|.+++......+++.+++.++.||+.||.|||++||
T Consensus 66 ~~~E~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i 141 (283)
T 3gen_A 66 FIEEAKVMMNLSHEKLVQLYG-VCTKQR---PIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQF 141 (283)
T ss_dssp HHHHHHHHHTCCCTTBCCEEE-EECSSS---SEEEEECCCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhcCCCCCEeeEEE-EEecCC---CeEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 347788999999999999999 554443 57999999 7999999997655569999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.++|+|||.+....... .
T Consensus 142 ~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~----------------------------------~------------ 175 (283)
T 3gen_A 142 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE----------------------------------Y------------ 175 (283)
T ss_dssp CCSSCSGGGEEECTTSCEEECSTTGGGGBCCHH----------------------------------H------------
T ss_pred cCCCCccceEEEcCCCCEEEccccccccccccc----------------------------------c------------
Confidence 999999999999999999999998874321110 0
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
. ......+|+.|+|||++.+..++.++|||||||++|
T Consensus 176 ------------------------~-------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~ 212 (283)
T 3gen_A 176 ------------------------T-------------------SSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMW 212 (283)
T ss_dssp ------------------------H-------------------STTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHH
T ss_pred ------------------------c-------------------cccCCccCcccCCHHHhccCCCCchhhHHHHHHHHH
Confidence 0 000134688999999999888999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004989 303 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~h 361 (720)
+|++ ||...... .....+.....+.......+...+|+.+||+.||.+|||+.++++|
T Consensus 213 ~l~t~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~ 274 (283)
T 3gen_A 213 EIYSLGKMPYERFTNS-ETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSN 274 (283)
T ss_dssp HHHTTTCCTTTTSCHH-HHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred HHHhCCCCCccccChh-HHHHHHhcccCCCCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHH
Confidence 9997 66655443 3444444433222222233455699999999999999999999963
No 178
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=99.97 E-value=4.5e-32 Score=292.01 Aligned_cols=207 Identities=15% Similarity=0.126 Sum_probs=161.0
Q ss_pred hchhhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCC----------------------CC
Q 004989 63 RKHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKR----------------------SV 118 (720)
Q Consensus 63 r~~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~----------------------~l 118 (720)
+..+|..+|.++ +||||+++++ ++.... .+|+|||| .+++|.+++..... .+
T Consensus 94 ~~~~E~~~l~~l~~hp~iv~~~~-~~~~~~---~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 169 (344)
T 1rjb_A 94 ALMSELKMMTQLGSHENIVNLLG-ACTLSG---PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVL 169 (344)
T ss_dssp HHHHHHHHHHHHCCCTTBCCEEE-EECSSS---SCEEEEECCTTCBHHHHHHTTTTCC---------------------C
T ss_pred HHHHHHHHHHhhcCCCCeeeEEE-EEeeCC---ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccC
Confidence 445788899999 9999999999 554443 57999999 89999999955432 37
Q ss_pred CHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhh
Q 004989 119 DVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDM 198 (720)
Q Consensus 119 ~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (720)
++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 170 ~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~----------------------- 226 (344)
T 1rjb_A 170 TFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDS----------------------- 226 (344)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEEETTTEEEECCCGGGSCGGGCT-----------------------
T ss_pred CHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEEcCCCcEEeCCCccCcccccCc-----------------------
Confidence 899999999999999999999999999999999999999999999999884321110
Q ss_pred hhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCccc
Q 004989 199 LQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYA 278 (720)
Q Consensus 199 ~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~ 278 (720)
.. .......||+.|+
T Consensus 227 ----------~~-------------------------------------------------------~~~~~~~~t~~y~ 241 (344)
T 1rjb_A 227 ----------NY-------------------------------------------------------VVRGNARLPVKWM 241 (344)
T ss_dssp ----------TS-------------------------------------------------------EEETTEEECGGGC
T ss_pred ----------cc-------------------------------------------------------eeccCccCccCcc
Confidence 00 0001135788999
Q ss_pred CcccccCCCCCccccchhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCC
Q 004989 279 SPEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK 354 (720)
Q Consensus 279 APE~l~~~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpt 354 (720)
|||++.+..++.++|||||||++|||++ ||............+.....++......+...+|+.+||+.||.+|||
T Consensus 242 aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps 321 (344)
T 1rjb_A 242 APESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPS 321 (344)
T ss_dssp CHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred CHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcC
Confidence 9999988889999999999999999997 676654443444444444333332233345569999999999999999
Q ss_pred hHHHHcC
Q 004989 355 MGELLQS 361 (720)
Q Consensus 355 a~eiL~h 361 (720)
+.+++++
T Consensus 322 ~~~l~~~ 328 (344)
T 1rjb_A 322 FPNLTSF 328 (344)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999973
No 179
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=99.97 E-value=2.7e-32 Score=298.60 Aligned_cols=204 Identities=16% Similarity=0.179 Sum_probs=158.8
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++|||||++++ ++.... .+|+|||| .+++|.+++...+..+++..++.++.||+.||.|||++|
T Consensus 158 ~~~~E~~~l~~l~hpniv~~~~-~~~~~~---~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ 233 (377)
T 3cbl_A 158 KFLQEARILKQYSHPNIVRLIG-VCTQKQ---PIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC 233 (377)
T ss_dssp TTTHHHHHHTTCCCTTBCCEEE-EECSSS---SCEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCEEEEEE-EEecCC---CcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 4457888999999999999999 554443 57999999 889999999665556999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||++.........
T Consensus 234 ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~-------------------------------------------- 269 (377)
T 3cbl_A 234 CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYA-------------------------------------------- 269 (377)
T ss_dssp EECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEE--------------------------------------------
T ss_pred cCCcccCHHHEEEcCCCcEEECcCCCceecCCCcee--------------------------------------------
Confidence 999999999999999999999999887432110000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
. ......+++.|+|||++.+..++.++|||||||++
T Consensus 270 ---------------------------~-----------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il 305 (377)
T 3cbl_A 270 ---------------------------A-----------------SGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILL 305 (377)
T ss_dssp ---------------------------C-----------------CSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHH
T ss_pred ---------------------------e-----------------cCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHH
Confidence 0 00002357789999999888899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||...... .....+..+..++. +..+| ...+||.+||+.||.+|||+.++++
T Consensus 306 ~el~t~g~~p~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~ 367 (377)
T 3cbl_A 306 WETFSLGASPYPNLSNQ-QTREFVEKGGRLPC-PELCPDAVFRLMEQCWAYEPGQRPSFSTIYQ 367 (377)
T ss_dssp HHHHTTSCCSSTTSCHH-HHHHHHHTTCCCCC-CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHhCCCCCCCCCCHH-HHHHHHHcCCCCCC-CCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 99997 66655443 33333443332222 23344 4459999999999999999999985
No 180
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=99.97 E-value=3.2e-32 Score=285.51 Aligned_cols=196 Identities=17% Similarity=0.226 Sum_probs=153.2
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++.+++||||+++++ ++.++. ..++|||| .|++|.+++......+++..++.++.||+.||.|||++|
T Consensus 58 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ 133 (289)
T 4fvq_A 58 SFFEAASMMSKLSHKHLVLNYG-VCVCGD---ENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENT 133 (289)
T ss_dssp HHHHHHHHHHTSCCTTBCCEEE-EECCTT---CCEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCEeEEEE-EEEeCC---CCEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence 3447888999999999999999 555443 45899999 789999999766556999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCc--------eEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccc
Q 004989 142 IVVHNVRPSCFVMSSFNH--------VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLV 213 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~--------vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla 213 (720)
|+||||||+|||++.++. +||+|||.+......
T Consensus 134 ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg~~~~~~~~--------------------------------------- 174 (289)
T 4fvq_A 134 LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPK--------------------------------------- 174 (289)
T ss_dssp CCCCCCCGGGEEEEECCBGGGTBCCEEEECCCCSCTTTSCH---------------------------------------
T ss_pred eECCCcCcceEEEecCCcccccccceeeeccCcccccccCc---------------------------------------
Confidence 999999999999998887 888777766221000
Q ss_pred cCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC-CCCCccc
Q 004989 214 TAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCAS 292 (720)
Q Consensus 214 ~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~s 292 (720)
....||+.|+|||++.+ ..++.++
T Consensus 175 -------------------------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~~ 199 (289)
T 4fvq_A 175 -------------------------------------------------------DILQERIPWVPPECIENPKNLNLAT 199 (289)
T ss_dssp -------------------------------------------------------HHHHHTTTTSCHHHHHCGGGCCHHH
T ss_pred -------------------------------------------------------cccCCcCcccCHHHhCCCCCCCchh
Confidence 01356889999999988 5589999
Q ss_pred cchhhhchhhhccc----cCCCCchHHHHHHHhhc-CCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 293 DIYRLGVLLFELFC----PFSTGEEKTRTMSSLRH-RVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 293 DIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~-~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||||||++|||++ ||...... ........ ..+++. ..+...+|+.+||++||.+|||+.++++
T Consensus 200 DiwslG~il~el~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~---~~~~l~~li~~~l~~dp~~Rps~~~ll~ 268 (289)
T 4fvq_A 200 DKWSFGTTLWEICSGGDKPLSALDSQ-RKLQFYEDRHQLPAP---KAAELANLINNCMDYEPDHRPSFRAIIR 268 (289)
T ss_dssp HHHHHHHHHHHHHTTTCCTTTTSCHH-HHHHHHHTTCCCCCC---SSCTTHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCCccccchH-HHHHHhhccCCCCCC---CCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 99999999999999 33333322 22222222 222222 2345579999999999999999999997
No 181
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=99.97 E-value=1.8e-32 Score=298.15 Aligned_cols=212 Identities=10% Similarity=0.090 Sum_probs=156.1
Q ss_pred hhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceec
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 145 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHr 145 (720)
.+...+..++||||+++++.+..........|+||||.|++|.+++......+++.+++.|+.||+.||.|||++||+||
T Consensus 97 ~e~~~~~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHr 176 (364)
T 3op5_A 97 QKWIRTRKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRFGSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHG 176 (364)
T ss_dssp HHHHHHTTCSCCCSCCEEEEEEEEETTEEEEEEEEECEEEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECC
T ss_pred HHHHHHhhccCCCCCeEEeeeeeccCCcceEEEEEeCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeEEe
Confidence 44556788999999999995555444344689999999999999997665679999999999999999999999999999
Q ss_pred cCCCCcEEEc--cCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 146 NVRPSCFVMS--SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 146 DLKP~NILl~--~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||+|||++ .++.+||+|||+++........ ..+
T Consensus 177 Dlkp~Nill~~~~~~~~kl~DFG~a~~~~~~~~~------------------------------~~~------------- 213 (364)
T 3op5_A 177 DIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVH------------------------------KAY------------- 213 (364)
T ss_dssp CCCGGGEEEESSCTTCEEECCCTTCEESSGGGCC------------------------------CCS-------------
T ss_pred cCCHHHEEEecCCCCeEEEEECCcceecccCCcc------------------------------ccc-------------
Confidence 9999999999 8899999999988543211000 000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
.........||+.|+|||++.+..++.++|||||||++||
T Consensus 214 ----------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~e 253 (364)
T 3op5_A 214 ----------------------------------------AADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQ 253 (364)
T ss_dssp ----------------------------------------SCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHH
T ss_pred ----------------------------------------ccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHH
Confidence 0000012468999999999999999999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhh---cCCCCccc-----cccCc-hHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 304 LFC---PFSTGEEKTRTMSSLR---HRVLPPQL-----LLKFP-KEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~---~~~~p~~~-----~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|++ ||.............. ...++..+ ....| ...+|+.+||..||.+||++.+|++
T Consensus 254 l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~ 322 (364)
T 3op5_A 254 WLTGHLPWEDNLKDPKYVRDSKIRYRENIASLMDKCFPAANAPGEIAKYMETVKLLDYTEKPLYENLRD 322 (364)
T ss_dssp HHHSCCTTGGGTTCHHHHHHHHHHHHHCHHHHHHHHSCTTCCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred HHhCCCCccccccCHHHHHHHHHHhhhhHHHHHHHhcccccCHHHHHHHHHHHhcCCCCCCCCHHHHHH
Confidence 999 6653211111111111 00111100 02223 4459999999999999999999875
No 182
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=99.97 E-value=6.1e-32 Score=284.12 Aligned_cols=205 Identities=18% Similarity=0.266 Sum_probs=155.4
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++||||+++++ +.... .+++|||| .|++|.+++......+++.+++.++.||+.||.|||++|
T Consensus 66 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~ 140 (289)
T 3og7_A 66 AFKNEVGVLRKTRHVNILLFMG-YSTAP----QLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS 140 (289)
T ss_dssp HHHHHHHHHTTCCCTTBCCEEE-EECSS----SCEEEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCcEEEEEe-eccCC----ccEEEEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 4457888999999999999999 44332 46899999 889999999666667999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.++|+|||++.........
T Consensus 141 i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-------------------------------------------- 176 (289)
T 3og7_A 141 IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGS-------------------------------------------- 176 (289)
T ss_dssp CCCSCCCGGGEEEETTTEEEECCCC-------------------------------------------------------
T ss_pred cccccCccceEEECCCCCEEEccceecccccccccc--------------------------------------------
Confidence 999999999999999999999999987432111000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCccccc---CCCCCccccchhhh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA---GAPVSCASDIYRLG 298 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~---~~~~s~~sDIwSLG 298 (720)
.......||+.|+|||++. +..++.++||||||
T Consensus 177 --------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG 212 (289)
T 3og7_A 177 --------------------------------------------HQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFG 212 (289)
T ss_dssp ---------------------------------------------------CCCTTCCHHHHC----CCSCHHHHHHHHH
T ss_pred --------------------------------------------ccccccCCCccccCchhhcccCCCCCCcccchHHHH
Confidence 0001146899999999996 55589999999999
Q ss_pred chhhhccc---cCCCCchHHHHHHHhhcCCCCccc---cccCch-HHHHHHHcCCCCCCCCCChHHHHc
Q 004989 299 VLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQL---LLKFPK-EASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~---~~~~p~-~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|++|+|++ ||............+.....++.+ ...+|. ..+|+.+||+.||.+|||+.++++
T Consensus 213 ~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~ 281 (289)
T 3og7_A 213 IVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILA 281 (289)
T ss_dssp HHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCCCTTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHCCCCccccchHHHHHHHhcccccCcchhhccccCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 99999999 777665555555555554444332 233444 459999999999999999999986
No 183
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=99.97 E-value=1.9e-32 Score=297.86 Aligned_cols=211 Identities=20% Similarity=0.256 Sum_probs=155.0
Q ss_pred hhhhhhcccCC-----------CCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhC-CCCCCCHHHHHHHHHHHHH
Q 004989 65 HSDGVELTHGD-----------HLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVE 132 (720)
Q Consensus 65 ~~e~~~L~~l~-----------HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~ 132 (720)
.+|..++.++. ||||+++++.+.........++++|||.+++|.+++.. ....+++..++.++.||+.
T Consensus 63 ~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~ 142 (373)
T 1q8y_A 63 EDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLL 142 (373)
T ss_dssp HHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHhhcccccchhccccchHHHHHHHhhccCCCCceEEEEEecCCCCHHHHHHHhhccCCcHHHHHHHHHHHHH
Confidence 35666666665 89999999955544444557899999999999999954 3445999999999999999
Q ss_pred HHHHHHHC-CceeccCCCCcEEEcc------CCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcc
Q 004989 133 IVYAAHSQ-GIVVHNVRPSCFVMSS------FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRL 205 (720)
Q Consensus 133 aL~yLHs~-gIvHrDLKP~NILl~~------~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 205 (720)
||.|||++ ||+||||||+|||++. .+.+||+|||++...+..
T Consensus 143 aL~~lH~~~~ivH~Dikp~NIll~~~~~~~~~~~~kl~Dfg~a~~~~~~------------------------------- 191 (373)
T 1q8y_A 143 GLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEH------------------------------- 191 (373)
T ss_dssp HHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTBC-------------------------------
T ss_pred HHHHHHhcCCEEecCCChHHeEEeccCCCcCcceEEEcccccccccCCC-------------------------------
Confidence 99999998 9999999999999953 347899888876322100
Q ss_pred cccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC
Q 004989 206 RREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG 285 (720)
Q Consensus 206 ~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 285 (720)
.....||+.|+|||++.+
T Consensus 192 --------------------------------------------------------------~~~~~~t~~y~aPE~~~~ 209 (373)
T 1q8y_A 192 --------------------------------------------------------------YTNSIQTREYRSPEVLLG 209 (373)
T ss_dssp --------------------------------------------------------------CCSCCSCGGGCCHHHHHT
T ss_pred --------------------------------------------------------------CCCCCCCccccCcHHHhC
Confidence 011367999999999999
Q ss_pred CCCCccccchhhhchhhhccc---cCCCCchH-----HHHHHHhhc--CCCCccc-------------------------
Q 004989 286 APVSCASDIYRLGVLLFELFC---PFSTGEEK-----TRTMSSLRH--RVLPPQL------------------------- 330 (720)
Q Consensus 286 ~~~s~~sDIwSLGvll~eLlt---pf~~~~~~-----~~~~~~l~~--~~~p~~~------------------------- 330 (720)
..++.++|||||||++|||++ ||...... ......+.. +.+|+.+
T Consensus 210 ~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (373)
T 1q8y_A 210 APWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKF 289 (373)
T ss_dssp CCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCB
T ss_pred CCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccc
Confidence 999999999999999999999 66543210 111111110 1111110
Q ss_pred -------------ccc-CchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004989 331 -------------LLK-FPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 331 -------------~~~-~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
... .+...+||.+||++||.+|||+.|+|+||||+...
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~ 341 (373)
T 1q8y_A 290 WPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTL 341 (373)
T ss_dssp CCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTCT
T ss_pred cchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhhChhhhccc
Confidence 011 12334999999999999999999999999999863
No 184
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=99.97 E-value=4.8e-32 Score=296.31 Aligned_cols=208 Identities=15% Similarity=0.124 Sum_probs=153.2
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++.+++||||+++++.++..+. ..|+|||| .+++|.+++......+++.+++.++.||+.||.|||++|
T Consensus 136 ~~~~E~~il~~l~hpnIv~~~~~~~~~~~---~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ 212 (373)
T 3c1x_A 136 QFLTEGIIMKDFSHPNVLSLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK 212 (373)
T ss_dssp HHHHHHTTSTTCCCTTBCCCCEEECCCSS---CCEEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCcceEEEEEEcCCC---CeEEEEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 44578889999999999999994343332 46899999 889999999777677999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||+++........ .
T Consensus 213 ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~--------------------------------~----------- 249 (373)
T 3c1x_A 213 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFD--------------------------------S----------- 249 (373)
T ss_dssp CCCSCCCGGGEEECTTCCEEECCC--------------------------------------------------------
T ss_pred EecCccchheEEECCCCCEEEeeccccccccccccc--------------------------------c-----------
Confidence 999999999999999999999999988543111000 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
........+|+.|+|||++.+..++.++|||||||++
T Consensus 250 -------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il 286 (373)
T 3c1x_A 250 -------------------------------------------VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLL 286 (373)
T ss_dssp ---------------------------------------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred -------------------------------------------ccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHH
Confidence 0000113568899999999988899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||...... .....+..+..+.......+...+|+.+||+.||.+|||+.|+++
T Consensus 287 ~ellt~~~~p~~~~~~~-~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~ 348 (373)
T 3c1x_A 287 WELMTRGAPPYPDVNTF-DITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 348 (373)
T ss_dssp HHHHTTSCCSCTTSCSS-CHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHhCcCCCCCCCCHH-HHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 99998 45443322 222233333222222222334559999999999999999999986
No 185
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=99.97 E-value=5.2e-32 Score=289.80 Aligned_cols=202 Identities=15% Similarity=0.142 Sum_probs=158.9
Q ss_pred hchhhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC---------------CCCCHHHHHH
Q 004989 63 RKHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---------------RSVDVYECLH 125 (720)
Q Consensus 63 r~~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~---------------~~l~~~~~~~ 125 (720)
+..+|..+|.++ +||||+++++ ++.+.. .+|+|||| .+++|.+++.... ..+++.+++.
T Consensus 71 ~~~~E~~~l~~l~~hp~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (327)
T 1fvr_A 71 DFAGELEVLCKLGHHPNIINLLG-ACEHRG---YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLH 146 (327)
T ss_dssp HHHHHHHHHTTCCCCTTBCCEEE-EEEETT---EEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHH
T ss_pred HHHHHHHHHHhccCCCchhhhce-eeeeCC---ceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHH
Confidence 445778899999 9999999999 555443 68999999 7999999996543 3699999999
Q ss_pred HHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcc
Q 004989 126 IFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRL 205 (720)
Q Consensus 126 i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 205 (720)
++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 147 i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kL~Dfg~~~~~~~~~------------------------------ 196 (327)
T 1fvr_A 147 FAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYV------------------------------ 196 (327)
T ss_dssp HHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEESSCEEC------------------------------
T ss_pred HHHHHHHHHHHHHhCCccCCCCccceEEEcCCCeEEEcccCcCccccccc------------------------------
Confidence 99999999999999999999999999999999999999998873210000
Q ss_pred cccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC
Q 004989 206 RREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG 285 (720)
Q Consensus 206 ~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 285 (720)
......+++.|+|||++.+
T Consensus 197 -------------------------------------------------------------~~~~~~~~~~y~aPE~~~~ 215 (327)
T 1fvr_A 197 -------------------------------------------------------------KKTMGRLPVRWMAIESLNY 215 (327)
T ss_dssp -------------------------------------------------------------CC----CCTTTCCHHHHHH
T ss_pred -------------------------------------------------------------cccCCCCCccccChhhhcc
Confidence 0001246889999999988
Q ss_pred CCCCccccchhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 286 APVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 286 ~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
..++.++|||||||++|||++ ||...... .....+.....++......+...+||.+||..||.+|||+.++++
T Consensus 216 ~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 293 (327)
T 1fvr_A 216 SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA-ELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILV 293 (327)
T ss_dssp CEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-HHHHHGGGTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred ccCCchhcchHHHHHHHHHHcCCCCCCCCCcHH-HHHHHhhcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 889999999999999999997 56554433 444555544333333333455569999999999999999999986
No 186
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=99.97 E-value=4.5e-32 Score=283.20 Aligned_cols=208 Identities=22% Similarity=0.312 Sum_probs=163.3
Q ss_pred chhhhhhcccCCCCCceecccceeecC-------------CCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHH
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENE-------------AAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFR 128 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~-------------~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~ 128 (720)
..+|..++.+++||||+++++ ++... .....+|++||| .+++|.+++.. ....+++..++.++.
T Consensus 51 ~~~e~~~l~~l~h~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ 129 (284)
T 2a19_B 51 AEREVKALAKLDHVNIVHYNG-CWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFE 129 (284)
T ss_dssp GHHHHHHHHHCCCTTBCCEEE-EEEEEEEC---------CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCEEEEee-eEeccccCcccccccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHH
Confidence 447788999999999999999 44321 112347999999 88899999943 334699999999999
Q ss_pred HHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhccccc
Q 004989 129 QIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRRE 208 (720)
Q Consensus 129 QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~ 208 (720)
||+.||.|||++||+||||||+||+++.++.++|+|||.+.......
T Consensus 130 qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--------------------------------- 176 (284)
T 2a19_B 130 QITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDG--------------------------------- 176 (284)
T ss_dssp HHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEESSCCS---------------------------------
T ss_pred HHHHHHHHHHhCCeeeccCCHHHEEEcCCCCEEECcchhheeccccc---------------------------------
Confidence 99999999999999999999999999999999999998874321110
Q ss_pred ccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCC
Q 004989 209 DLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV 288 (720)
Q Consensus 209 Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 288 (720)
......||+.|+|||++.+..+
T Consensus 177 ----------------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~ 198 (284)
T 2a19_B 177 ----------------------------------------------------------KRTRSKGTLRYMSPEQISSQDY 198 (284)
T ss_dssp ----------------------------------------------------------CCCCCCSCCTTSCHHHHHCSCC
T ss_pred ----------------------------------------------------------cccccCCcccccChhhhccCCC
Confidence 0011357999999999999889
Q ss_pred CccccchhhhchhhhccccCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCC
Q 004989 289 SCASDIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 366 (720)
Q Consensus 289 s~~sDIwSLGvll~eLltpf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~ 366 (720)
+.++|||||||++|||+++..+..........+....+++.+ .+...+||.+||+.||.+|||+.|++++.+.-.
T Consensus 199 ~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~ 273 (284)
T 2a19_B 199 GKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDGIISDIF---DKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWK 273 (284)
T ss_dssp CTHHHHHHHHHHHHHHHSCCSSHHHHHHHHHHHHTTCCCTTS---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHT
T ss_pred cchhhhHHHHHHHHHHHhcCCcchhHHHHHHHhhcccccccC---CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHh
Confidence 999999999999999999555544444445555555444332 234559999999999999999999999876443
No 187
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=99.97 E-value=1.2e-31 Score=293.94 Aligned_cols=206 Identities=16% Similarity=0.155 Sum_probs=161.8
Q ss_pred hhchhhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC---------------CCCCHHHHH
Q 004989 62 LRKHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---------------RSVDVYECL 124 (720)
Q Consensus 62 ~r~~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~---------------~~l~~~~~~ 124 (720)
.+..+|..++.++ +|||||++++ ++.... .+|+|||| .+++|.+++.... ..+++.+++
T Consensus 119 ~~~~~E~~~l~~l~~hpnIv~~~~-~~~~~~---~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 194 (382)
T 3tt0_A 119 SDLISEMEMMKMIGKHKNIINLLG-ACTQDG---PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 194 (382)
T ss_dssp HHHHHHHHHHHHHCCCTTBCCEEE-EECSSS---SCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHH
T ss_pred HHHHHHHHHHHHhcCCchhhhhee-eeccCC---ceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHH
Confidence 3445788899998 9999999999 555443 46999999 7899999995432 358999999
Q ss_pred HHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhc
Q 004989 125 HIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTR 204 (720)
Q Consensus 125 ~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 204 (720)
.|+.||+.||.|||++||+||||||+|||++.++.+||+|||++...+.....
T Consensus 195 ~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~--------------------------- 247 (382)
T 3tt0_A 195 SCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY--------------------------- 247 (382)
T ss_dssp HHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECSCSCCCCSSCCCTT---------------------------
T ss_pred HHHHHHHHHHHHHHhCCEecCCCCcceEEEcCCCcEEEcccCccccccccccc---------------------------
Confidence 99999999999999999999999999999999999999999988543221000
Q ss_pred ccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCccccc
Q 004989 205 LRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA 284 (720)
Q Consensus 205 ~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 284 (720)
.......||+.|+|||++.
T Consensus 248 -------------------------------------------------------------~~~~~~~~t~~y~aPE~~~ 266 (382)
T 3tt0_A 248 -------------------------------------------------------------KKTTNGRLPVKWMAPEALF 266 (382)
T ss_dssp -------------------------------------------------------------CCCTTCCCGGGGSCHHHHH
T ss_pred -------------------------------------------------------------ccccCCCCCcceeCHHHhc
Confidence 0001135688999999999
Q ss_pred CCCCCccccchhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 285 GAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 285 ~~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
+..++.++|||||||++|||++ ||..... ......+.....++......+...+|+.+||+.||.+|||+.|+++
T Consensus 267 ~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~ 345 (382)
T 3tt0_A 267 DRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV-EELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 345 (382)
T ss_dssp SCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH-HHHHHHHHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH-HHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 9889999999999999999998 5655433 3444555544433333333445569999999999999999999987
No 188
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=99.97 E-value=8.2e-32 Score=294.43 Aligned_cols=206 Identities=16% Similarity=0.160 Sum_probs=153.8
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++||||+++++ ++.... .+|+|||| .+++|.+++.+....+++.+++.++.||+.||.|||++|
T Consensus 92 ~~~~E~~~l~~l~h~niv~~~~-~~~~~~---~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ 167 (373)
T 2qol_A 92 DFLGEASIMGQFDHPNIIRLEG-VVTKSK---PVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG 167 (373)
T ss_dssp HHHHHHHHHTTCCCTTBCCEEE-EECSSS---SCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCCCeEEE-EEeeCC---ceEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3447888999999999999999 554443 57999999 799999999776667999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||++......... ..
T Consensus 168 ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~-------------------------------~~----------- 205 (373)
T 2qol_A 168 YVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEA-------------------------------AY----------- 205 (373)
T ss_dssp CCCSCCCGGGEEECTTCCEEECCC--------------------------------------------------------
T ss_pred eeCCCCCcceEEEcCCCCEEECcCccccccccCCcc-------------------------------ce-----------
Confidence 999999999999999999999999987443211000 00
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......+|+.|+|||++.+..++.++|||||||++
T Consensus 206 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il 240 (373)
T 2qol_A 206 ---------------------------------------------TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVL 240 (373)
T ss_dssp -----------------------------------------------------CTTSCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred ---------------------------------------------eccCCCcCCCccChhhhccCCcCchhcHHHHHHHH
Confidence 00002457889999999988899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||...... .....+.....++......+...+|+.+||+.||.+||++.++++
T Consensus 241 ~ellt~g~~P~~~~~~~-~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~ 302 (373)
T 2qol_A 241 WEVMSYGERPYWEMSNQ-DVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS 302 (373)
T ss_dssp HHHHTTC-CTTTTCCHH-HHHHHHHTTEECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHhCCCCCCCCCCHH-HHHHHHHcCCCCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHH
Confidence 99886 66655443 334444433222222222334559999999999999999999985
No 189
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=99.97 E-value=2.1e-32 Score=288.41 Aligned_cols=211 Identities=14% Similarity=0.130 Sum_probs=152.7
Q ss_pred hhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH--
Q 004989 62 LRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAH-- 138 (720)
Q Consensus 62 ~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLH-- 138 (720)
+..+.+...+..++||||+++++.+.........+|+|||| .+++|.++++.. .+++..++.++.||+.||.|||
T Consensus 47 ~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~ 124 (301)
T 3q4u_A 47 WFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLT--TLDTVSCLRIVLSIASGLAHLHIE 124 (301)
T ss_dssp HHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEEECCCTTCBHHHHHTTC--CBCHHHHHHHHHHHHHHHHHHHSC
T ss_pred hHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEehhhccCCCHHHHHhhc--ccCHHHHHHHHHHHHHHHHHHHHh
Confidence 34445555555689999999999555444444568999999 889999999543 4999999999999999999999
Q ss_pred ------HCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhccccccccc
Q 004989 139 ------SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQL 212 (720)
Q Consensus 139 ------s~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgl 212 (720)
++||+||||||+|||++.++.+||+|||++......... .
T Consensus 125 ~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~--------------------------------~-- 170 (301)
T 3q4u_A 125 IFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQ--------------------------------L-- 170 (301)
T ss_dssp BCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTE--------------------------------E--
T ss_pred hhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCCeeeccccccc--------------------------------c--
Confidence 999999999999999999999999999987432111000 0
Q ss_pred ccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC------
Q 004989 213 VTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA------ 286 (720)
Q Consensus 213 a~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~------ 286 (720)
........||+.|+|||++.+.
T Consensus 171 ----------------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~ 198 (301)
T 3q4u_A 171 ----------------------------------------------------DVGNNPRVGTKRYMAPEVLDETIQVDCF 198 (301)
T ss_dssp ----------------------------------------------------ECCCCCCCCCGGGCCHHHHTTCCCTTCH
T ss_pred ----------------------------------------------------cccccccccccceeChhhhcCcCCCCcc
Confidence 0000114789999999999877
Q ss_pred CCCccccchhhhchhhhcccc-------------CCCC----chHHHHHHHhhcCCCCccccc------cCchHHHHHHH
Q 004989 287 PVSCASDIYRLGVLLFELFCP-------------FSTG----EEKTRTMSSLRHRVLPPQLLL------KFPKEASFCLW 343 (720)
Q Consensus 287 ~~s~~sDIwSLGvll~eLltp-------------f~~~----~~~~~~~~~l~~~~~p~~~~~------~~p~~~~Li~~ 343 (720)
.++.++|||||||++|||+++ |... .........+......+.++. ..+...+|+.+
T Consensus 199 ~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 278 (301)
T 3q4u_A 199 DSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKE 278 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHH
T ss_pred cCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCCcchhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHH
Confidence 456799999999999999974 3221 111222222222222222211 11234599999
Q ss_pred cCCCCCCCCCChHHHHc
Q 004989 344 LLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 344 ~L~~dP~~Rpta~eiL~ 360 (720)
||+.||.+|||+.++++
T Consensus 279 cl~~dP~~Rps~~~i~~ 295 (301)
T 3q4u_A 279 CWYQNPSARLTALRIKK 295 (301)
T ss_dssp HCCSSGGGSCCHHHHHH
T ss_pred HhhcChhhCCCHHHHHH
Confidence 99999999999999986
No 190
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=99.97 E-value=5.5e-32 Score=282.93 Aligned_cols=203 Identities=21% Similarity=0.194 Sum_probs=157.3
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++.+++||||+++++ ++.++ ..|++||| .+++|.+++......+++..++.++.||+.||.|||++|
T Consensus 59 ~~~~E~~~l~~l~h~~i~~~~~-~~~~~----~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ 133 (281)
T 3cc6_A 59 KFMSEAVIMKNLDHPHIVKLIG-IIEEE----PTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESIN 133 (281)
T ss_dssp HHHHHHHHHHHHCCTTBCCEEE-EECSS----SCEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCcceEEE-EEcCC----CCEEEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 4457888999999999999999 55443 35899999 889999999665556999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.+||+|||.+.........
T Consensus 134 i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-------------------------------------------- 169 (281)
T 3cc6_A 134 CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYY-------------------------------------------- 169 (281)
T ss_dssp CCCCCCSGGGEEEEETTEEEECCCCGGGCC--------------------------------------------------
T ss_pred cccCCCccceEEECCCCcEEeCccCCCccccccccc--------------------------------------------
Confidence 999999999999999999999999987433211000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......+|+.|+|||++.+..++.++|||||||++
T Consensus 170 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 204 (281)
T 3cc6_A 170 ---------------------------------------------KASVTRLPIKWMSPESINFRRFTTASDVWMFAVCM 204 (281)
T ss_dssp ------------------------------------------------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred ---------------------------------------------ccccCCCCcceeCchhhccCCCCchhccHHHHHHH
Confidence 00013468899999999888899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||...... .....+.....++......+...+|+.+||+.||.+|||+.|+++
T Consensus 205 ~~llt~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~ 266 (281)
T 3cc6_A 205 WEILSFGKQPFFWLENK-DVIGVLEKGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVC 266 (281)
T ss_dssp HHHHTTTCCTTTTSCGG-GHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHhCCCCCcccCChH-HHHHHHhcCCCCCCCCCCCHHHHHHHHHHccCCchhCcCHHHHHH
Confidence 99997 56543332 223333333222222223345569999999999999999999986
No 191
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.97 E-value=1.1e-31 Score=281.80 Aligned_cols=206 Identities=13% Similarity=0.110 Sum_probs=162.0
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++||||+++++ ++..+ .+++|||| .+++|.+++......+++..++.++.||+.||.|||++|
T Consensus 56 ~~~~E~~~l~~l~h~~i~~~~~-~~~~~----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ 130 (287)
T 1u59_A 56 EMMREAQIMHQLDNPYIVRLIG-VCQAE----ALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN 130 (287)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EEESS----SEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCEeEEEE-EecCC----CcEEEEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 4457888999999999999999 55433 47999999 888999999666666999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.++|+|||.+...+..... .
T Consensus 131 i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~--------------------------------~----------- 167 (287)
T 1u59_A 131 FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSY--------------------------------Y----------- 167 (287)
T ss_dssp EECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCE--------------------------------E-----------
T ss_pred EeeCCCchheEEEcCCCCEEECcccceeeeccCcce--------------------------------e-----------
Confidence 999999999999999999999999988543221000 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
.......||+.|+|||++.+..++.++|||||||++
T Consensus 168 --------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 203 (287)
T 1u59_A 168 --------------------------------------------TARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTM 203 (287)
T ss_dssp --------------------------------------------CCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHH
T ss_pred --------------------------------------------eccccccccccccCHHHhccCCCCchhhHHHHHHHH
Confidence 000013568899999999888899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004989 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~h 361 (720)
|||++ ||...... ..+..+.....++......+...+||.+||..||.+||++.+++++
T Consensus 204 ~ellt~g~~p~~~~~~~-~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~ 266 (287)
T 1u59_A 204 WEALSYGQKPYKKMKGP-EVMAFIEQGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQR 266 (287)
T ss_dssp HHHHTTSCCTTTTCCTH-HHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred HHHHcCCCCCcccCCHH-HHHHHHhcCCcCCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 99997 66554443 3444444443333222333455599999999999999999999974
No 192
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=99.97 E-value=3.7e-32 Score=303.22 Aligned_cols=211 Identities=16% Similarity=0.228 Sum_probs=146.7
Q ss_pred hhhhhhcccC-CCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCC------CCHHHHHHHHHHHHHHHHHH
Q 004989 65 HSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRS------VDVYECLHIFRQIVEIVYAA 137 (720)
Q Consensus 65 ~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~------l~~~~~~~i~~QIl~aL~yL 137 (720)
.+|..+|.++ +|||||++++ ++.+.. .+|+||||.+++|.+++...... .++..++.++.||+.||.||
T Consensus 56 ~~E~~~l~~l~~HpnIv~~~~-~~~~~~---~~~lv~E~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~L 131 (434)
T 2rio_A 56 LMEIKLLTESDDHPNVIRYYC-SETTDR---FLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHL 131 (434)
T ss_dssp HHHHHHHHHHTTSTTBCCEEE-EEECSS---EEEEEECCCSEEHHHHHHTC------------CCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccCCCCcCeEEE-EEecCC---eEEEEEecCCCCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHH
Confidence 4677788765 8999999999 554443 68999999777999999554321 13335678999999999999
Q ss_pred HHCCceeccCCCCcEEEccC-------------CceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhc
Q 004989 138 HSQGIVVHNVRPSCFVMSSF-------------NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTR 204 (720)
Q Consensus 138 Hs~gIvHrDLKP~NILl~~~-------------~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 204 (720)
|++||+||||||+|||++.+ +.+||+|||++........
T Consensus 132 H~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG~a~~~~~~~~---------------------------- 183 (434)
T 2rio_A 132 HSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQS---------------------------- 183 (434)
T ss_dssp HHTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCTTCEECCC-------------------------------
T ss_pred HHCCccccCCChHhEEEecCcccccccccCCCceEEEEcccccceecCCCCc----------------------------
Confidence 99999999999999999754 3788888887743321100
Q ss_pred ccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCccccc
Q 004989 205 LRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA 284 (720)
Q Consensus 205 ~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 284 (720)
.+ ........||+.|+|||++.
T Consensus 184 ----~~------------------------------------------------------~~~~~~~~gt~~y~aPE~~~ 205 (434)
T 2rio_A 184 ----SF------------------------------------------------------RTNLNNPSGTSGWRAPELLE 205 (434)
T ss_dssp ---------------------------------------------------------------------CCTTSCHHHHS
T ss_pred ----cc------------------------------------------------------eeeecCCCCCCCccCHHHhc
Confidence 00 00001147899999999997
Q ss_pred C-------CCCCccccchhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCcccc----cc-CchHHHHHHHcCCCC
Q 004989 285 G-------APVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLL----LK-FPKEASFCLWLLHPE 348 (720)
Q Consensus 285 ~-------~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~----~~-~p~~~~Li~~~L~~d 348 (720)
+ ..++.++|||||||++|||++ ||....... ...+......+... .. .+...+||.+||+.|
T Consensus 206 ~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~--~~i~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d 283 (434)
T 2rio_A 206 ESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE--SNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHD 283 (434)
T ss_dssp CCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH--HHHHHTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSS
T ss_pred cccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH--HHHhcCCCCcccccccccccchHHHHHHHHHHhhCC
Confidence 6 458999999999999999998 554433222 11122111111111 11 134459999999999
Q ss_pred CCCCCChHHHHcCcccCCC
Q 004989 349 PSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 349 P~~Rpta~eiL~hp~~~~~ 367 (720)
|.+|||+.++++||||...
T Consensus 284 P~~Rps~~eil~hp~f~~~ 302 (434)
T 2rio_A 284 PLKRPTAMKVLRHPLFWPK 302 (434)
T ss_dssp GGGSCCHHHHHTSGGGSCH
T ss_pred hhhCCCHHHHHhCCccCCc
Confidence 9999999999999999764
No 193
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=99.97 E-value=1e-31 Score=284.81 Aligned_cols=205 Identities=16% Similarity=0.181 Sum_probs=159.2
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC-----------------------CCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-----------------------RSV 118 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~-----------------------~~l 118 (720)
+..+|..+|.+++||||+++++ ++.... .+++|||| .+++|.+++.... ..+
T Consensus 72 ~~~~E~~~l~~l~hp~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (314)
T 2ivs_A 72 DLLSEFNVLKQVNHPHVIKLYG-ACSQDG---PLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERAL 147 (314)
T ss_dssp HHHHHHHHHTTCCCTTBCCEEE-EECSSS---SCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEE
T ss_pred HHHHHHHHHhhCCCCceeeEEE-EEecCC---ceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCc
Confidence 4447888999999999999999 554443 47999999 8899999995432 238
Q ss_pred CHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhh
Q 004989 119 DVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDM 198 (720)
Q Consensus 119 ~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (720)
++.+++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++........
T Consensus 148 ~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~---------------------- 205 (314)
T 2ivs_A 148 TMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDS---------------------- 205 (314)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTEEEECCCTTCEECTTTSC----------------------
T ss_pred CHHHHHHHHHHHHHHHHHHHHCCCcccccchheEEEcCCCCEEEcccccccccccccc----------------------
Confidence 9999999999999999999999999999999999999999999999998743321100
Q ss_pred hhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCccc
Q 004989 199 LQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYA 278 (720)
Q Consensus 199 ~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~ 278 (720)
+ .......+|+.|+
T Consensus 206 -----------~-------------------------------------------------------~~~~~~~~~~~y~ 219 (314)
T 2ivs_A 206 -----------Y-------------------------------------------------------VKRSQGRIPVKWM 219 (314)
T ss_dssp -----------E-------------------------------------------------------ECSSCCCSCGGGC
T ss_pred -----------c-------------------------------------------------------eeccCCCCccccc
Confidence 0 0000135688999
Q ss_pred CcccccCCCCCccccchhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCC
Q 004989 279 SPEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK 354 (720)
Q Consensus 279 APE~l~~~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpt 354 (720)
|||++.+..++.++|||||||++|||++ ||...... .....+.....++......+...+|+.+||+.||.+|||
T Consensus 220 aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps 298 (314)
T 2ivs_A 220 AIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPE-RLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPV 298 (314)
T ss_dssp CHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG-GHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred ChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-HHHHHhhcCCcCCCCccCCHHHHHHHHHHccCChhhCcC
Confidence 9999998889999999999999999998 56544332 333444444333332233345569999999999999999
Q ss_pred hHHHHc
Q 004989 355 MGELLQ 360 (720)
Q Consensus 355 a~eiL~ 360 (720)
+.++++
T Consensus 299 ~~~l~~ 304 (314)
T 2ivs_A 299 FADISK 304 (314)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999986
No 194
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=99.97 E-value=1.1e-31 Score=285.16 Aligned_cols=199 Identities=18% Similarity=0.242 Sum_probs=152.7
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCC--CCCHHHHHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKR--SVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~--~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
+..+|..+|.+++||||+++++ ++.+ ..|+|||| .|++|.+++..... .+++..++.++.||+.||.|||+
T Consensus 47 ~~~~E~~~l~~l~hp~iv~~~~-~~~~-----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~ 120 (307)
T 2eva_A 47 AFIVELRQLSRVNHPNIVKLYG-ACLN-----PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHS 120 (307)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-BCTT-----TTEEEEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhcCCCCCcCeEEE-EEcC-----CcEEEEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHh
Confidence 3447788999999999999999 4432 35899999 89999999965432 47899999999999999999999
Q ss_pred ---CCceeccCCCCcEEEccCCc-eEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccC
Q 004989 140 ---QGIVVHNVRPSCFVMSSFNH-VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 215 (720)
Q Consensus 140 ---~gIvHrDLKP~NILl~~~~~-vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~ 215 (720)
+||+||||||+|||++.++. +||+|||.+......
T Consensus 121 ~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~----------------------------------------- 159 (307)
T 2eva_A 121 MQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH----------------------------------------- 159 (307)
T ss_dssp CSSSCCCCCCCSGGGEEEETTTTEEEECCCCC------------------------------------------------
T ss_pred CCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc-----------------------------------------
Confidence 89999999999999998886 799988887322100
Q ss_pred CCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccch
Q 004989 216 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIY 295 (720)
Q Consensus 216 ~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIw 295 (720)
.....||+.|+|||++.+..++.++|||
T Consensus 160 ----------------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~Di~ 187 (307)
T 2eva_A 160 ----------------------------------------------------MTNNKGSAAWMAPEVFEGSNYSEKCDVF 187 (307)
T ss_dssp ---------------------------------------------------------CCTTSSCHHHHTCCCCCTHHHHH
T ss_pred ----------------------------------------------------cccCCCCCceEChhhhCCCCCCcHHHHH
Confidence 0013579999999999998899999999
Q ss_pred hhhchhhhccc---cCCCCc-hHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 296 RLGVLLFELFC---PFSTGE-EKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 296 SLGvll~eLlt---pf~~~~-~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
||||++|||++ ||.... .....+..+.....++......+...+|+.+||+.||.+|||+.++++
T Consensus 188 slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 256 (307)
T 2eva_A 188 SWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVK 256 (307)
T ss_dssp HHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTCCCCCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHHHHCCCCchhhCccHHHHHHHHhcCCCCCcccccCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 99999999999 665432 222333334444344333333344559999999999999999999986
No 195
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=99.97 E-value=8.4e-32 Score=289.39 Aligned_cols=205 Identities=15% Similarity=0.130 Sum_probs=159.8
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC-----------------------CCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-----------------------RSV 118 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~-----------------------~~l 118 (720)
+..+|..++.+++||||+++++ ++.... .+|+|||| .+++|.+++.... ..+
T Consensus 96 ~~~~E~~~l~~l~hp~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 171 (343)
T 1luf_A 96 DFQREAALMAEFDNPNIVKLLG-VCAVGK---PMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPL 171 (343)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEE-EECSSS---SCEEEEECCTTCBHHHHHHHTCC----------------------CCC
T ss_pred HHHHHHHHHHhCCCCCEEEEEE-EEccCC---ceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCC
Confidence 4457888999999999999999 555443 57999999 8899999995421 458
Q ss_pred CHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhh
Q 004989 119 DVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDM 198 (720)
Q Consensus 119 ~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (720)
++.+++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 172 ~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~------------------------ 227 (343)
T 1luf_A 172 SCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSA------------------------ 227 (343)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGG------------------------
T ss_pred CHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEECCCCeEEEeecCCCcccccC------------------------
Confidence 99999999999999999999999999999999999999999999999987322110
Q ss_pred hhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCccc
Q 004989 199 LQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYA 278 (720)
Q Consensus 199 ~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~ 278 (720)
+. ........||+.|+
T Consensus 228 ----------~~------------------------------------------------------~~~~~~~~~t~~y~ 243 (343)
T 1luf_A 228 ----------DY------------------------------------------------------YKADGNDAIPIRWM 243 (343)
T ss_dssp ----------GC------------------------------------------------------BC----CCBCGGGC
T ss_pred ----------cc------------------------------------------------------ccccCCCcccceec
Confidence 00 00001135789999
Q ss_pred CcccccCCCCCccccchhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCC
Q 004989 279 SPEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK 354 (720)
Q Consensus 279 APE~l~~~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpt 354 (720)
|||++.+..++.++|||||||++|||++ ||...... .....+.....++......+...+|+.+||+.||.+|||
T Consensus 244 aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps 322 (343)
T 1luf_A 244 PPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHE-EVIYYVRDGNILACPENCPLELYNLMRLCWSKLPADRPS 322 (343)
T ss_dssp CHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH-HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred ChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCChH-HHHHHHhCCCcCCCCCCCCHHHHHHHHHHcccCcccCCC
Confidence 9999998889999999999999999997 66554433 344444444433322223344569999999999999999
Q ss_pred hHHHHc
Q 004989 355 MGELLQ 360 (720)
Q Consensus 355 a~eiL~ 360 (720)
+.++++
T Consensus 323 ~~~~~~ 328 (343)
T 1luf_A 323 FCSIHR 328 (343)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999986
No 196
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=99.97 E-value=9.6e-32 Score=284.96 Aligned_cols=206 Identities=15% Similarity=0.175 Sum_probs=159.5
Q ss_pred hchhhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCC-----------------CCCHHHH
Q 004989 63 RKHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKR-----------------SVDVYEC 123 (720)
Q Consensus 63 r~~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~-----------------~l~~~~~ 123 (720)
+..+|..+|.++ +||||+++++ ++.... .+++|||| .+++|.+++..... .+++.++
T Consensus 72 ~~~~E~~~l~~l~~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (313)
T 1t46_A 72 ALMSELKVLSYLGNHMNIVNLLG-ACTIGG---PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 147 (313)
T ss_dssp HHHHHHHHHHHHCCCTTBCCEEE-EECSSS---SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHH
T ss_pred HHHHHHHHHhhcccCCCeeeEEE-EEecCC---CcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHH
Confidence 344788899999 9999999999 555543 46999999 78899999954332 4899999
Q ss_pred HHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhh
Q 004989 124 LHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRT 203 (720)
Q Consensus 124 ~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 203 (720)
+.++.||+.||.|||++||+||||||+||+++.++.+||+|||.+...+....
T Consensus 148 ~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--------------------------- 200 (313)
T 1t46_A 148 LSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSN--------------------------- 200 (313)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEETTTEEEECCCGGGSCTTSCTT---------------------------
T ss_pred HHHHHHHHHHHHHHHHCCeecCCCccceEEEcCCCCEEEcccccccccccccc---------------------------
Confidence 99999999999999999999999999999999999999999998854322100
Q ss_pred cccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccc
Q 004989 204 RLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEEL 283 (720)
Q Consensus 204 ~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l 283 (720)
+ .......||+.|+|||++
T Consensus 201 ------~-------------------------------------------------------~~~~~~~~~~~y~aPE~~ 219 (313)
T 1t46_A 201 ------Y-------------------------------------------------------VVKGNARLPVKWMAPESI 219 (313)
T ss_dssp ------S-------------------------------------------------------EECSSSEECGGGCCHHHH
T ss_pred ------c-------------------------------------------------------eeccCCCCcceeeChHHh
Confidence 0 000013568899999999
Q ss_pred cCCCCCccccchhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHH
Q 004989 284 AGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELL 359 (720)
Q Consensus 284 ~~~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL 359 (720)
.+..++.++|||||||++|||++ ||............+.....+.......+...+|+.+||++||.+|||+.|++
T Consensus 220 ~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell 299 (313)
T 1t46_A 220 FNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIV 299 (313)
T ss_dssp HHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred cCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhHHHHHhccCCCCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHH
Confidence 88889999999999999999997 66554433334444443332222222334456999999999999999999998
Q ss_pred c
Q 004989 360 Q 360 (720)
Q Consensus 360 ~ 360 (720)
+
T Consensus 300 ~ 300 (313)
T 1t46_A 300 Q 300 (313)
T ss_dssp H
T ss_pred H
Confidence 6
No 197
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=99.97 E-value=7.5e-32 Score=288.41 Aligned_cols=207 Identities=16% Similarity=0.144 Sum_probs=140.8
Q ss_pred hhhh-hcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhC----CCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 66 SDGV-ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK----PKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 66 ~e~~-~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~----~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+|.. ++..++||||+++++ ++.... .+++||||..++|.+++.. ....+++..+..++.||+.||.|||++
T Consensus 69 ~e~~~~~~~~~h~niv~~~~-~~~~~~---~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~ 144 (327)
T 3aln_A 69 MDLDVVMRSSDCPYIVQFYG-ALFREG---DCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKEN 144 (327)
T ss_dssp HHHHHHHSSCCCTTBCCEEE-EEECSS---EEEEEECCCSEEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCCcEeeeee-EEEeCC---ceEEEEeecCCChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhcc
Confidence 4443 778899999999999 454443 5799999966799988842 345599999999999999999999999
Q ss_pred -CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCC
Q 004989 141 -GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 141 -gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
||+||||||+|||++.++.+||+|||++.......
T Consensus 145 ~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~-------------------------------------------- 180 (327)
T 3aln_A 145 LKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSI-------------------------------------------- 180 (327)
T ss_dssp HSCCCSCCCGGGEEEETTTEEEECCCSSSCC-------------------------------------------------
T ss_pred CCEeECCCCHHHEEEcCCCCEEEccCCCceeccccc--------------------------------------------
Confidence 99999999999999999999999998874321110
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccc----cCCCCCccccch
Q 004989 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEEL----AGAPVSCASDIY 295 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l----~~~~~s~~sDIw 295 (720)
......||+.|+|||++ .+..++.++|||
T Consensus 181 -----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~ 213 (327)
T 3aln_A 181 -----------------------------------------------AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVW 213 (327)
T ss_dssp ------------------------------------------------------------------------CCSHHHHH
T ss_pred -----------------------------------------------ccccCCCCccccCceeeccccCcCCCCchhhHH
Confidence 00013679999999999 455589999999
Q ss_pred hhhchhhhccc---cCCCCchHHHHHHHhhcCCCCc---cccc-cCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 296 RLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPP---QLLL-KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 296 SLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~---~~~~-~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
||||++|+|++ ||.........+..+.....+. .... ..+...+|+.+||+.||.+|||+.++++||||...
T Consensus 214 slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~~ 292 (327)
T 3aln_A 214 SLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFILMY 292 (327)
T ss_dssp HHHHHHHHHHHSCCCSSCC-------CCCCCSCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCCcchHHHHHHHHhcCCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhChHHHHh
Confidence 99999999999 6665433322222222222211 1112 23445699999999999999999999999999764
No 198
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=99.97 E-value=1e-31 Score=288.01 Aligned_cols=210 Identities=15% Similarity=0.130 Sum_probs=161.4
Q ss_pred chhhhhhcccC-CCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++.++ +||||+++++ ++.... ..|+||||.+++|.+++......+++.+++.|+.||+.||.|||++||
T Consensus 51 ~~~E~~~l~~l~~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i 126 (330)
T 2izr_A 51 LHLEYRFYKQLGSGDGIPQVYY-FGPCGK---YNAMVLELLGPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNL 126 (330)
T ss_dssp HHHHHHHHHHHCSCTTSCCEEE-EEEETT---EEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHHhhCCCCCCEEEE-EEecCC---ccEEEEEeCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 34677788888 9999999999 555443 679999999999999996655669999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCc-----eEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCC
Q 004989 143 VVHNVRPSCFVMSSFNH-----VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~-----vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~ 217 (720)
+||||||+|||++.++. +||+|||++........... .
T Consensus 127 iHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~~~~~------------------------------~------- 169 (330)
T 2izr_A 127 IYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKH------------------------------I------- 169 (330)
T ss_dssp ECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTTTCCB------------------------------C-------
T ss_pred eccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCCCCcc------------------------------c-------
Confidence 99999999999998887 99999998854322100000 0
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhh
Q 004989 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRL 297 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSL 297 (720)
.........||+.|+|||++.+..++.++|||||
T Consensus 170 ----------------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~sl 203 (330)
T 2izr_A 170 ----------------------------------------------PYREHKSLTGTARYMSINTHLGKEQSRRDDLEAL 203 (330)
T ss_dssp ----------------------------------------------CCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHH
T ss_pred ----------------------------------------------cccccCCcCCCccccChHHHcCCCCCchhHHHHH
Confidence 0000112578999999999999999999999999
Q ss_pred hchhhhccc---cCCCC--chHHHHHHHhhc---CCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 298 GVLLFELFC---PFSTG--EEKTRTMSSLRH---RVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 298 Gvll~eLlt---pf~~~--~~~~~~~~~l~~---~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
||++|||++ ||... ......+..+.. ...+..+...+|...+|+.+||..||.+||++.+|++
T Consensus 204 G~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~~~li~~~l~~~p~~RP~~~~l~~ 274 (330)
T 2izr_A 204 GHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCENFPEMATYLRYVRRLDFFEKPDYDYLRK 274 (330)
T ss_dssp HHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHSCHHHHTTTCHHHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred HHHHHHHhcCCCCccccccccHHHHHHHHHhhhccCCHHHHhccChHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence 999999999 77653 222233333322 1222233445677779999999999999999999875
No 199
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=99.97 E-value=1.2e-31 Score=300.49 Aligned_cols=200 Identities=16% Similarity=0.132 Sum_probs=156.2
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~-~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
..+|..+|.+++|||||++++++..... .+|+|||| .+++|.++|...+ ..+++..++.++.||+.||.|||++|
T Consensus 233 ~~~E~~~l~~l~h~niv~~~~~~~~~~~---~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ 309 (450)
T 1k9a_A 233 FLAEASVMTQLRHSNLVQLLGVIVEEKG---GLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN 309 (450)
T ss_dssp HHHHHHHHHTCCCTTBCCEEEEEECTTS---CEEEEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhccCCCEEEEEEEEEcCCC---ceEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3478889999999999999994443332 57999999 8899999995443 34799999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||+++.....
T Consensus 310 ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~----------------------------------------------- 342 (450)
T 1k9a_A 310 FVHRDLAARNVLVSEDNVAKVSDFGLTKEASST----------------------------------------------- 342 (450)
T ss_dssp EECSCCCGGGEEECTTSCEEECCCTTCEECC-------------------------------------------------
T ss_pred eeCCCCCHhhEEECCCCCEEEeeCCCccccccc-----------------------------------------------
Confidence 999999999999999999999999887421100
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
.....+++.|+|||++.+..++.++|||||||++
T Consensus 343 ----------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l 376 (450)
T 1k9a_A 343 ----------------------------------------------QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILL 376 (450)
T ss_dssp --------------------------------------------------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHH
T ss_pred ----------------------------------------------ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHH
Confidence 0002457889999999998899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||...... .....+..+..++......+...+||.+||+.||.+|||+.++++
T Consensus 377 ~el~t~g~~P~~~~~~~-~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~ 438 (450)
T 1k9a_A 377 WEIYSFGRVPYPRIPLK-DVVPRVEKGYKMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLRE 438 (450)
T ss_dssp HHHHTTTCCSSTTSCTT-THHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHhCCCCCCCCCCHH-HHHHHHHcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 99997 66654333 233344444333222223344559999999999999999999985
No 200
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=99.97 E-value=7.6e-32 Score=286.14 Aligned_cols=208 Identities=20% Similarity=0.224 Sum_probs=161.0
Q ss_pred hchhhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCC---------------CCCHHHHHH
Q 004989 63 RKHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKR---------------SVDVYECLH 125 (720)
Q Consensus 63 r~~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~---------------~l~~~~~~~ 125 (720)
+..+|..+|.++ +||||+++++ ++.... ..++++||| .+++|.+++..... .+++..++.
T Consensus 76 ~~~~E~~~l~~l~~hp~iv~~~~-~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (316)
T 2xir_A 76 ALMSELKILIHIGHHLNVVNLLG-ACTKPG--GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 152 (316)
T ss_dssp HHHHHHHHHHHHCCCTTBCCEEE-EECCTT--SCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHH
T ss_pred HHHHHHHHHHhcccCCCeeeEEE-EEecCC--CceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHH
Confidence 445788889888 7999999999 443332 247999999 88999999965432 289999999
Q ss_pred HHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcc
Q 004989 126 IFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRL 205 (720)
Q Consensus 126 i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 205 (720)
++.||+.||.|||++||+||||||+||+++.++.+||+|||.+.......
T Consensus 153 ~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~------------------------------ 202 (316)
T 2xir_A 153 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP------------------------------ 202 (316)
T ss_dssp HHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCT------------------------------
T ss_pred HHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEECCCccccccccCc------------------------------
Confidence 99999999999999999999999999999999999999999885432110
Q ss_pred cccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC
Q 004989 206 RREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG 285 (720)
Q Consensus 206 ~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 285 (720)
.. .......||+.|+|||++.+
T Consensus 203 ---~~-------------------------------------------------------~~~~~~~~t~~y~aPE~~~~ 224 (316)
T 2xir_A 203 ---DY-------------------------------------------------------VRKGDARLPLKWMAPETIFD 224 (316)
T ss_dssp ---TS-------------------------------------------------------EEETTEEECGGGCCHHHHHH
T ss_pred ---cc-------------------------------------------------------eeccCCCcceeecCchhhcc
Confidence 00 00011357899999999998
Q ss_pred CCCCccccchhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004989 286 APVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 286 ~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~h 361 (720)
..++.++|||||||++|||++ ||............+.....++......+...+|+.+||+.||.+|||+.|+++|
T Consensus 225 ~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~ 304 (316)
T 2xir_A 225 RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304 (316)
T ss_dssp CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred ccccchhHHHHHHHHHHHHHhCCCCCCcccchhHHHHHHhccCccCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 889999999999999999997 6665543334444444443333222334556699999999999999999999974
No 201
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=99.97 E-value=2.1e-31 Score=283.07 Aligned_cols=203 Identities=16% Similarity=0.214 Sum_probs=151.2
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++.+++||||+++++ ++..+. .+|++||| .|++|.+++.... .+++.+++.++.||+.||.|||++|
T Consensus 80 ~~~~e~~~l~~l~hp~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~ 154 (309)
T 2h34_A 80 RMQREARTAGRLQEPHVVPIHD-FGEIDG---QLYVDMRLINGVDLAAMLRRQG-PLAPPRAVAIVRQIGSALDAAHAAG 154 (309)
T ss_dssp HHHHHHHHHTTCCCTTBCCEEE-EEEETT---EEEEEEECCCCEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhhcCCCCeeEEEE-EEeeCC---eEEEEEEecCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCc
Confidence 3447888999999999999999 554443 67999999 7889999995543 4999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.++|+|||.+.........
T Consensus 155 i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~-------------------------------------------- 190 (309)
T 2h34_A 155 ATHRDVKPENILVSADDFAYLVDFGIASATTDEKLT-------------------------------------------- 190 (309)
T ss_dssp CCCSCCCGGGEEECTTSCEEECSCCC------------------------------------------------------
T ss_pred CCcCCCChHHEEEcCCCCEEEecCccCccccccccc--------------------------------------------
Confidence 999999999999999999999999987432111000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......||+.|+|||++.+..++.++|||||||++
T Consensus 191 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 225 (309)
T 2h34_A 191 ---------------------------------------------QLGNTVGTLYYMAPERFSESHATYRADIYALTCVL 225 (309)
T ss_dssp ---------------------------------------------------CCGGGCCGGGTCC----CCCHHHHHHHHH
T ss_pred ---------------------------------------------cccccCCCcCccCHHHHcCCCCCchHhHHHHHHHH
Confidence 00113689999999999988899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCC-ccccccCch-HHHHHHHcCCCCCCCCC-ChHHHHc
Q 004989 302 FELFC---PFSTGEEKTRTMSSLRHRVLP-PQLLLKFPK-EASFCLWLLHPEPSGRP-KMGELLQ 360 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p-~~~~~~~p~-~~~Li~~~L~~dP~~Rp-ta~eiL~ 360 (720)
|||++ ||...... .....+.....+ ......+|. ..+||.+||+.||.+|| +++++++
T Consensus 226 ~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~ 289 (309)
T 2h34_A 226 YECLTGSPPYQGDQLS-VMGAHINQAIPRPSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSA 289 (309)
T ss_dssp HHHHHSSCSSCSCHHH-HHHHHHHSCCCCGGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHH
T ss_pred HHHHHCCCCCCCchHH-HHHHHhccCCCCccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHH
Confidence 99999 66655433 333333333222 233344444 45999999999999999 7888775
No 202
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.97 E-value=3.7e-31 Score=284.45 Aligned_cols=206 Identities=13% Similarity=0.146 Sum_probs=158.0
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++.+++||||+++++ ++.... .+++|||| .+++|.+++......+++.+++.++.||+.||.|||++|
T Consensus 92 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ 167 (333)
T 1mqb_A 92 DFLGEAGIMGQFSHHNIIRLEG-VISKYK---PMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMN 167 (333)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEE-EECSSS---SEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCCCcEEE-EEecCC---CcEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 4447888999999999999999 554433 67999999 788999999766566999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||.+......... .+
T Consensus 168 ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~-------------------------------~~----------- 205 (333)
T 1mqb_A 168 YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEA-------------------------------TY----------- 205 (333)
T ss_dssp CCCSCCCGGGEEECTTCCEEECCCCC------------------------------------------------------
T ss_pred eeCCCCChheEEECCCCcEEECCCCcchhhcccccc-------------------------------cc-----------
Confidence 999999999999999999999999988443211000 00
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......+|+.|+|||++.+..++.++|||||||++
T Consensus 206 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 240 (333)
T 1mqb_A 206 ---------------------------------------------TTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVM 240 (333)
T ss_dssp --------------------------------------------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHH
T ss_pred ---------------------------------------------ccCCCCccccccCchhcccCCCCchhhhHHHHHHH
Confidence 00012468899999999988899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||...... ..+..+.....++......+...+|+.+||+.||.+||++.++++
T Consensus 241 ~ellt~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~ 302 (333)
T 1mqb_A 241 WEVMTYGERPYWELSNH-EVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVS 302 (333)
T ss_dssp HHHHTTSCCTTTTCCHH-HHHHHHHTTCCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred HHHHcCCCCCcccCCHH-HHHHHHHCCCcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 99987 66554433 344445444333332233344569999999999999999999986
No 203
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=99.97 E-value=4.6e-31 Score=281.98 Aligned_cols=208 Identities=14% Similarity=0.119 Sum_probs=154.9
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC---CCCCCHHHHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---KRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~---~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
+..+|..++..++||||+++++ ++.... ..++|||| .+++|.+++... ...+++..++.++.||+.||.|||
T Consensus 73 ~~~~e~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH 148 (326)
T 3uim_A 73 QFQTEVEMISMAVHRNLLRLRG-FCMTPT---ERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLH 148 (326)
T ss_dssp HHHHHHHGGGTCCCTTBCCCCE-EECCSS---CCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCCccceEE-EEecCC---ceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 4457778999999999999999 555443 45899999 899999999543 334899999999999999999999
Q ss_pred HC---CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccC
Q 004989 139 SQ---GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 215 (720)
Q Consensus 139 s~---gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~ 215 (720)
++ ||+||||||+|||++.++.+||+|||++...+.....
T Consensus 149 ~~~~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-------------------------------------- 190 (326)
T 3uim_A 149 DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH-------------------------------------- 190 (326)
T ss_dssp HSSSSCEECCCCSGGGEEECTTCCEEECCCSSCEECCSSSSC--------------------------------------
T ss_pred hCCCCCeEeCCCchhhEEECCCCCEEeccCccccccCccccc--------------------------------------
Confidence 99 9999999999999999999999999987432111000
Q ss_pred CCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccch
Q 004989 216 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIY 295 (720)
Q Consensus 216 ~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIw 295 (720)
......||+.|+|||++.+..++.++|||
T Consensus 191 ---------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~ 219 (326)
T 3uim_A 191 ---------------------------------------------------VTTAVRGTIGHIAPEYLSTGKSSEKTDVF 219 (326)
T ss_dssp ---------------------------------------------------EECCCCSCGGGCCHHHHHHSEECHHHHHH
T ss_pred ---------------------------------------------------ccccccCCcCccCHHHhccCCCCccccch
Confidence 00113589999999999888899999999
Q ss_pred hhhchhhhccc---cCCCC-------chHHHHHHHh-hcCC----CCcccccc-----CchHHHHHHHcCCCCCCCCCCh
Q 004989 296 RLGVLLFELFC---PFSTG-------EEKTRTMSSL-RHRV----LPPQLLLK-----FPKEASFCLWLLHPEPSGRPKM 355 (720)
Q Consensus 296 SLGvll~eLlt---pf~~~-------~~~~~~~~~l-~~~~----~p~~~~~~-----~p~~~~Li~~~L~~dP~~Rpta 355 (720)
||||++|||++ ||... .......... .... ....+... .+...+|+.+||+.||.+|||+
T Consensus 220 slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~ 299 (326)
T 3uim_A 220 GYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKM 299 (326)
T ss_dssp HHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCH
T ss_pred hHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCH
Confidence 99999999999 55310 0000111111 1110 11111111 1234599999999999999999
Q ss_pred HHHHcCcc
Q 004989 356 GELLQSEF 363 (720)
Q Consensus 356 ~eiL~hp~ 363 (720)
.|+++|-.
T Consensus 300 ~ell~~L~ 307 (326)
T 3uim_A 300 SEVVRMLE 307 (326)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhc
Confidence 99998654
No 204
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.97 E-value=2e-31 Score=275.96 Aligned_cols=203 Identities=15% Similarity=0.172 Sum_probs=159.1
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++.+++||||+++++ ++.... .++++||| .+++|.+++......+++..++.++.||+.||.|||++||
T Consensus 50 ~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i 125 (267)
T 3t9t_A 50 FIEEAEVMMKLSHPKLVQLYG-VCLEQA---PICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACV 125 (267)
T ss_dssp HHHHHHHHHTCCCTTBCCEEE-EECSSS---SCEEEECCCTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhCCCCCEeeEEE-EEccCC---CeEEEEeCCCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 346778999999999999999 554443 57999999 7899999997665669999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.++|+|||.+....... .
T Consensus 126 ~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~----------------------------------~------------ 159 (267)
T 3t9t_A 126 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ----------------------------------Y------------ 159 (267)
T ss_dssp CCSSCCGGGEEECGGGCEEECCTTGGGGBCCHH----------------------------------H------------
T ss_pred ccCCCchheEEECCCCCEEEccccccccccccc----------------------------------c------------
Confidence 999999999999999999999998874321100 0
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
. ......||+.|+|||++.+..++.++|||||||++|
T Consensus 160 ------------------------~-------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ 196 (267)
T 3t9t_A 160 ------------------------T-------------------SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMW 196 (267)
T ss_dssp ------------------------H-------------------STTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred ------------------------c-------------------ccccccccccccChhhhcCCCccchhchhhhHHHHH
Confidence 0 000135688999999998888999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 303 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
+|++ ||...... .....+.....+.......+...+|+.+||+.||.+|||+.++++
T Consensus 197 ~l~~~g~~p~~~~~~~-~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~ 257 (267)
T 3t9t_A 197 EVFSEGKIPYENRSNS-EVVEDISTGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLR 257 (267)
T ss_dssp HHHTTSCCTTTTCCHH-HHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHhccCCCCCCCCCHH-HHHHHHhcCCcCCCCccCcHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 9998 55554333 344444444322222223345569999999999999999999986
No 205
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=99.97 E-value=6.8e-32 Score=288.11 Aligned_cols=207 Identities=17% Similarity=0.235 Sum_probs=154.4
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC---CCCCHHHHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---RSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~---~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
+..+|..+|..++||||+++++ ++.... .+++|||| .+++|.+++.... ..+++..++.++.||+.||.|||
T Consensus 81 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH 156 (321)
T 2qkw_B 81 EFETEIETLSFCRHPHLVSLIG-FCDERN---EMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH 156 (321)
T ss_dssp HHHHHHHGGGSCCCTTBCCEEE-ECCCTT---CCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCEeeEEE-EEcCCC---eEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhc
Confidence 4457888999999999999999 554443 56999999 8899999994432 34899999999999999999999
Q ss_pred HCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCC
Q 004989 139 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
++||+||||||+||+++.++.+||+|||++.........
T Consensus 157 ~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~----------------------------------------- 195 (321)
T 2qkw_B 157 TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQT----------------------------------------- 195 (321)
T ss_dssp HTTEECSCCCSTTEEECTTCCEEECCCTTCEECSSSSCC-----------------------------------------
T ss_pred CCCeecCCCCHHHEEECCCCCEEEeeccccccccccccc-----------------------------------------
Confidence 999999999999999999999999999987432111000
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhh
Q 004989 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
.......||+.|+|||++.+..++.++||||||
T Consensus 196 -----------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG 228 (321)
T 2qkw_B 196 -----------------------------------------------HLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFG 228 (321)
T ss_dssp -----------------------------------------------CCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHH
T ss_pred -----------------------------------------------ccccccCCCccccCHHHhcCCCCCcccchHhHH
Confidence 000113689999999999888899999999999
Q ss_pred chhhhccc---cCCCCchH------HHHHHHhhcC----CCCccccccC-----chHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 299 VLLFELFC---PFSTGEEK------TRTMSSLRHR----VLPPQLLLKF-----PKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~------~~~~~~l~~~----~~p~~~~~~~-----p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|++|||++ ||...... .......... ...+.+.... +...+|+.+||+.||++|||+.|+++
T Consensus 229 ~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~ 308 (321)
T 2qkw_B 229 VVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLW 308 (321)
T ss_dssp HHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 99999999 55432111 0001111111 1112211111 23349999999999999999999996
Q ss_pred C
Q 004989 361 S 361 (720)
Q Consensus 361 h 361 (720)
+
T Consensus 309 ~ 309 (321)
T 2qkw_B 309 K 309 (321)
T ss_dssp H
T ss_pred H
Confidence 3
No 206
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=99.97 E-value=6.5e-32 Score=291.65 Aligned_cols=211 Identities=13% Similarity=0.096 Sum_probs=156.5
Q ss_pred hhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceec
Q 004989 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 145 (720)
Q Consensus 66 ~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHr 145 (720)
+|..++..++||||+++++.+.........+|+||||.|++|.+++...+ .+++.+++.|+.||+.||.|||++||+||
T Consensus 97 ~e~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~ivH~ 175 (345)
T 2v62_A 97 KKWIERKQLDYLGIPLFYGSGLTEFKGRSYRFMVMERLGIDLQKISGQNG-TFKKSTVLQLGIRMLDVLEYIHENEYVHG 175 (345)
T ss_dssp HHHHHHHTCSCCCCCCEEEEEEEESSSCEEEEEEEECEEEEHHHHCBGGG-BCCHHHHHHHHHHHHHHHHHHHHTTEECS
T ss_pred HHHHhhccccccCcceeecccccccCCCcEEEEEEeccCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeeCC
Confidence 66778889999999999995544333344789999999899999995544 59999999999999999999999999999
Q ss_pred cCCCCcEEEccCC--ceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCccc
Q 004989 146 NVRPSCFVMSSFN--HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 146 DLKP~NILl~~~~--~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||+|||++.++ .+||+|||+++........ ..+
T Consensus 176 Dlkp~NIll~~~~~~~~kL~Dfg~a~~~~~~~~~------------------------------~~~------------- 212 (345)
T 2v62_A 176 DIKAANLLLGYKNPDQVYLADYGLSYRYCPNGNH------------------------------KQY------------- 212 (345)
T ss_dssp CCSGGGEEEESSSTTSEEECCCTTCEESSGGGCC------------------------------CCC-------------
T ss_pred CcCHHHEEEccCCCCcEEEEeCCCceeccccccc------------------------------ccc-------------
Confidence 9999999999877 9999999988543211000 000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhhh
Q 004989 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
.........||+.|+|||++.+..++.++|||||||++||
T Consensus 213 ----------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~e 252 (345)
T 2v62_A 213 ----------------------------------------QENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLR 252 (345)
T ss_dssp ----------------------------------------CCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHH
T ss_pred ----------------------------------------hhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHH
Confidence 0000012478999999999999989999999999999999
Q ss_pred ccc---cCCCCchHHHHH---HHhhcCCCCccccc-----cCc-hHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 304 LFC---PFSTGEEKTRTM---SSLRHRVLPPQLLL-----KFP-KEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~---~~l~~~~~p~~~~~-----~~p-~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|++ ||.......... .......+++.+.. ..| ...+|+.+||..||.+||++.+|++
T Consensus 253 ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~ 321 (345)
T 2v62_A 253 WLCGKLPWEQNLKDPVAVQTAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKK 321 (345)
T ss_dssp HHHSSCTTGGGTTCHHHHHHHHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred HHhCCCCccccccccHHHHHHHHhhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence 999 664321111111 11111223332211 233 4559999999999999999999986
No 207
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=99.97 E-value=1.1e-31 Score=287.28 Aligned_cols=209 Identities=17% Similarity=0.128 Sum_probs=158.4
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++||||+++++.++ .. ....+|+|||| .+++|.+++......+++..++.++.||+.||.|||++|
T Consensus 70 ~~~~E~~~l~~l~h~~i~~~~~~~~-~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ 147 (327)
T 3lxl_A 70 DFQREIQILKALHSDFIVKYRGVSY-GP-GRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRR 147 (327)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEEEEE-CS-SSCEEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhcCCCceeEEEEEEe-cC-CCceEEEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3457888999999999999999433 22 22368999999 799999999654445999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||.+...+.... ..
T Consensus 148 ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~---------------------------------~~---------- 184 (327)
T 3lxl_A 148 CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKD---------------------------------YY---------- 184 (327)
T ss_dssp EECSCCSGGGEEEEETTEEEECCGGGCEECCTTCS---------------------------------EE----------
T ss_pred ccCCCCChhhEEECCCCCEEEcccccceecccCCc---------------------------------cc----------
Confidence 99999999999999999999999998854322100 00
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
.......||+.|+|||++.+..++.++|||||||++
T Consensus 185 --------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 220 (327)
T 3lxl_A 185 --------------------------------------------VVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVL 220 (327)
T ss_dssp --------------------------------------------ECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHH
T ss_pred --------------------------------------------eeeccCCccccccCHHHhccCCCChHHhHHHHHHHH
Confidence 000113578999999999988899999999999999
Q ss_pred hhccc---cCCCCch--------------HHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFC---PFSTGEE--------------KTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt---pf~~~~~--------------~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|+|++ ||..... .......+.....++......+...+|+.+||++||.+|||+.|+++
T Consensus 221 ~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~ 296 (327)
T 3lxl_A 221 YELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGP 296 (327)
T ss_dssp HHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHhCCCCCccccchhhhhcccccccccHHHHHHHhhcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 99999 4432211 11222233333333332233344559999999999999999999975
No 208
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=99.97 E-value=1.4e-31 Score=281.74 Aligned_cols=208 Identities=14% Similarity=0.125 Sum_probs=156.2
Q ss_pred hhhhhcccC-CCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCcee
Q 004989 66 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
+|..++..+ +||||+++++ ++.... ..++||||.+++|.+++...+..+++.+++.++.||+.||.|||++||+|
T Consensus 54 ~e~~~~~~l~~~~~i~~~~~-~~~~~~---~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH 129 (298)
T 1csn_A 54 DEYRTYKLLAGCTGIPNVYY-FGQEGL---HNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVY 129 (298)
T ss_dssp HHHHHHHHTTTCTTCCCEEE-EEEETT---EEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEEC
T ss_pred HHHHHHHHHhcCCCCCeEEe-ecCCCc---eeEEEEEecCCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCEec
Confidence 556677777 7999999999 554443 67999999999999999766666999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCc-----eEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCC
Q 004989 145 HNVRPSCFVMSSFNH-----VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 145 rDLKP~NILl~~~~~-----vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
|||||+|||++.++. +||+|||++........... .
T Consensus 130 ~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~------------------------------~--------- 170 (298)
T 1csn_A 130 RDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQH------------------------------I--------- 170 (298)
T ss_dssp CCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCB------------------------------C---------
T ss_pred CCCCHHHEEeccCCCCCCCeEEEEECcccccccccccccc------------------------------c---------
Confidence 999999999987766 99999998854322110000 0
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhc
Q 004989 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
.........||+.|+|||++.+..++.++|||||||
T Consensus 171 --------------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~ 206 (298)
T 1csn_A 171 --------------------------------------------PYREKKNLSGTARYMSINTHLGREQSRRDDLEALGH 206 (298)
T ss_dssp --------------------------------------------CCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHH
T ss_pred --------------------------------------------cccCccCCCCCcccCCchhhcCCCCChHHHHHHHHH
Confidence 000011247899999999999988999999999999
Q ss_pred hhhhccc---cCCCCc--hHHHHHHHhhcC---CCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 300 LLFELFC---PFSTGE--EKTRTMSSLRHR---VLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 300 ll~eLlt---pf~~~~--~~~~~~~~l~~~---~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
++|||++ ||.... .....+..+... ...+.+...+| ...+|+.+||..||.+||++.+|++
T Consensus 207 il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~ 276 (298)
T 1csn_A 207 VFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQG 276 (298)
T ss_dssp HHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred HHHHHHcCCCCcchhhccccHHHHHHHHhhccCccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHH
Confidence 9999999 676532 122222222221 12222233444 4459999999999999999999985
No 209
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=99.97 E-value=2.2e-31 Score=283.83 Aligned_cols=206 Identities=14% Similarity=0.102 Sum_probs=159.7
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC---------CCCCCHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---------KRSVDVYECLHIFRQIVE 132 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~---------~~~l~~~~~~~i~~QIl~ 132 (720)
+..+|..++.+++||||+++++ ++.+.. .+++|||| .+++|.+++... ...+++..++.++.||+.
T Consensus 74 ~~~~E~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~ 149 (322)
T 1p4o_A 74 EFLNEASVMKEFNCHHVVRLLG-VVSQGQ---PTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIAD 149 (322)
T ss_dssp HHHHHHHHGGGCCCTTBCCEEE-EECSSS---SCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCEeeeEE-EEccCC---ccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHH
Confidence 4457888999999999999999 554443 56999999 789999999432 134799999999999999
Q ss_pred HHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhccccccccc
Q 004989 133 IVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQL 212 (720)
Q Consensus 133 aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgl 212 (720)
||.|||++||+||||||+||+++.++.+||+|||++...... +.
T Consensus 150 ~l~~lH~~~i~H~dikp~NIli~~~~~~kl~Dfg~~~~~~~~----------------------------------~~-- 193 (322)
T 1p4o_A 150 GMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET----------------------------------DY-- 193 (322)
T ss_dssp HHHHHHHTTCBCSCCSGGGEEECTTCCEEECCTTCCCGGGGG----------------------------------GC--
T ss_pred HHHHHHHCCCccCCCccceEEEcCCCeEEECcCccccccccc----------------------------------cc--
Confidence 999999999999999999999999999999999987322100 00
Q ss_pred ccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccc
Q 004989 213 VTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCAS 292 (720)
Q Consensus 213 a~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~s 292 (720)
........||+.|+|||++.+..++.++
T Consensus 194 ----------------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~ 221 (322)
T 1p4o_A 194 ----------------------------------------------------YRKGGKGLLPVRWMSPESLKDGVFTTYS 221 (322)
T ss_dssp ----------------------------------------------------EEGGGSSEECGGGCCHHHHHHCCCCHHH
T ss_pred ----------------------------------------------------cccccCCCCCCCccChhhhccCCCCchh
Confidence 0000113578999999999988899999
Q ss_pred cchhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004989 293 DIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 293 DIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~h 361 (720)
|||||||++|||++ ||...... .....+.....++......+...+||.+||+.||.+|||+.|++++
T Consensus 222 Di~slG~il~el~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~ 293 (322)
T 1p4o_A 222 DVWSFGVVLWEIATLAEQPYQGLSNE-QVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 293 (322)
T ss_dssp HHHHHHHHHHHHHHTSCCTTTTSCHH-HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred hHHHHHHHHHHHHhcCCCccccCCHH-HHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 99999999999998 55544333 3444444444333333333445699999999999999999999974
No 210
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=99.97 E-value=1.7e-31 Score=286.12 Aligned_cols=210 Identities=13% Similarity=0.146 Sum_probs=151.6
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ- 140 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~- 140 (720)
..+.+...+..++||||+++++.+.........+|+|||| .+++|.+++... .+++..++.++.||+.||.|||++
T Consensus 77 ~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~ 154 (337)
T 3mdy_A 77 FRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKST--TLDAKSMLKLAYSSVSGLCHLHTEI 154 (337)
T ss_dssp HHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHSCB
T ss_pred hhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEEEEeccCCCcHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHHhh
Confidence 3345555555579999999999444443333578999999 789999999554 399999999999999999999998
Q ss_pred -------CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccc
Q 004989 141 -------GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLV 213 (720)
Q Consensus 141 -------gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla 213 (720)
||+||||||+|||++.++.+||+|||++......... .
T Consensus 155 ~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~--------------------------------~--- 199 (337)
T 3mdy_A 155 FSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNE--------------------------------V--- 199 (337)
T ss_dssp CSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEECC-----------------------------------------
T ss_pred hhhccCCCEEecccchHHEEECCCCCEEEEeCCCceeecccccc--------------------------------c---
Confidence 9999999999999999999999999988443221000 0
Q ss_pred cCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCcc--
Q 004989 214 TAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCA-- 291 (720)
Q Consensus 214 ~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~-- 291 (720)
........||+.|+|||++.+..++..
T Consensus 200 ---------------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~ 228 (337)
T 3mdy_A 200 ---------------------------------------------------DIPPNTRVGTKRYMPPEVLDESLNRNHFQ 228 (337)
T ss_dssp ------------------------------------------------------CCSSCSCGGGCCHHHHTTCCCTTCTH
T ss_pred ---------------------------------------------------cCCCCCCccCcceeChhhcccccCCcccc
Confidence 000011478999999999988776555
Q ss_pred ----ccchhhhchhhhcccc-------------CCCC----chHHHHHHHhhcCCCCccccc-----cC-chHHHHHHHc
Q 004989 292 ----SDIYRLGVLLFELFCP-------------FSTG----EEKTRTMSSLRHRVLPPQLLL-----KF-PKEASFCLWL 344 (720)
Q Consensus 292 ----sDIwSLGvll~eLltp-------------f~~~----~~~~~~~~~l~~~~~p~~~~~-----~~-p~~~~Li~~~ 344 (720)
+|||||||++|||+++ |... .........+......+.+.. .. +...+|+.+|
T Consensus 229 ~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~ 308 (337)
T 3mdy_A 229 SYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTEC 308 (337)
T ss_dssp HHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHH
T ss_pred CccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCCCchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHh
Confidence 9999999999999973 2211 111222222222222222222 12 2345999999
Q ss_pred CCCCCCCCCChHHHHc
Q 004989 345 LHPEPSGRPKMGELLQ 360 (720)
Q Consensus 345 L~~dP~~Rpta~eiL~ 360 (720)
|+.||.+|||+.++++
T Consensus 309 l~~dP~~Rps~~ell~ 324 (337)
T 3mdy_A 309 WAHNPASRLTALRVKK 324 (337)
T ss_dssp SCSSGGGSCCHHHHHH
T ss_pred hhhChhhCCCHHHHHH
Confidence 9999999999999986
No 211
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=99.97 E-value=6.7e-31 Score=279.43 Aligned_cols=208 Identities=17% Similarity=0.178 Sum_probs=157.0
Q ss_pred hhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 62 LRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 62 ~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
.+..+|..++.+++||||+++++ ++.... .++++||| .|++|.+++......+++..++.++.||+.||.|||++
T Consensus 74 ~~~~~e~~~l~~l~h~~iv~~~~-~~~~~~---~~~iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~ 149 (319)
T 2y4i_B 74 KAFKREVMAYRQTRHENVVLFMG-ACMSPP---HLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAK 149 (319)
T ss_dssp CCCCTTGGGGTTCCCTTBCCCCE-EEECSS---CEEEECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcCCCCCEeEEEE-EEecCC---ceEEEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 34457888999999999999999 554443 57999999 78999999976666799999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+||+++ ++.++|+|||++...+..... .
T Consensus 150 ~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~--------------------------------~---------- 186 (319)
T 2y4i_B 150 GILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAG--------------------------------R---------- 186 (319)
T ss_dssp TCCCCCCCSTTEEEC---CCEECCCSCCC---------------------------------------------------
T ss_pred CccccCCChhhEEEe-CCCEEEeecCCcccccccccc--------------------------------c----------
Confidence 999999999999997 789999999987433211000 0
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC---------CCCCcc
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG---------APVSCA 291 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~---------~~~s~~ 291 (720)
.........||+.|+|||++.+ ..++.+
T Consensus 187 -------------------------------------------~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~ 223 (319)
T 2y4i_B 187 -------------------------------------------REDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKH 223 (319)
T ss_dssp --------------------------------------------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHH
T ss_pred -------------------------------------------cccccccCCCcccccChHHhhhccccccccccCCCch
Confidence 0000011368999999999975 347899
Q ss_pred ccchhhhchhhhccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 292 SDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 292 sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
+|||||||++|||++ ||...... .....+.....+......+ +...+|+.+||..||.+|||+.++++
T Consensus 224 ~Di~slG~il~el~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~ 295 (319)
T 2y4i_B 224 SDVFALGTIWYELHAREWPFKTQPAE-AIIWQMGTGMKPNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMD 295 (319)
T ss_dssp HHHHHHHHHHHHHHHSSCSSSSCCHH-HHHHHHHTTCCCCCCCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHH
T ss_pred hhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHhccCCCCCCCcCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 999999999999999 67655443 3334444444433333233 45569999999999999999999986
No 212
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=99.97 E-value=1.3e-31 Score=281.03 Aligned_cols=205 Identities=15% Similarity=0.082 Sum_probs=157.8
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++.+++||||+++++ ++... .++++||| .+++|.+++......+++..++.++.||+.||.|||++|
T Consensus 67 ~~~~e~~~l~~l~h~~i~~~~~-~~~~~----~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ 141 (291)
T 1u46_A 67 DFIREVNAMHSLDHRNLIRLYG-VVLTP----PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR 141 (291)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EECSS----SCEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCcccEEE-EEccC----CceeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhCC
Confidence 4457888999999999999999 55443 26899999 889999999655455999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.+||+|||.+......... .
T Consensus 142 i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~--------------------------------~----------- 178 (291)
T 1u46_A 142 FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH--------------------------------Y----------- 178 (291)
T ss_dssp EECSCCCGGGEEEEETTEEEECCCTTCEECCC-CCE--------------------------------E-----------
T ss_pred cccCCCchheEEEcCCCCEEEccccccccccccccc--------------------------------h-----------
Confidence 999999999999999999999999987443211000 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
.......+|+.|+|||++.+..++.++|||||||++
T Consensus 179 --------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 214 (291)
T 1u46_A 179 --------------------------------------------VMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTL 214 (291)
T ss_dssp --------------------------------------------EC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHH
T ss_pred --------------------------------------------hhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHH
Confidence 000013568899999999888899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|+|++ ||...... .....+............+ +...+|+.+||..||.+|||+.++++
T Consensus 215 ~~l~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~ 277 (291)
T 1u46_A 215 WEMFTYGQEPWIGLNGS-QILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRD 277 (291)
T ss_dssp HHHHTTSCCTTTTCCHH-HHHHHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHhCCCCCcccCCHH-HHHHHHHccCCCCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 99997 56555444 3333343332222223334 44559999999999999999999986
No 213
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=99.97 E-value=3.4e-31 Score=277.53 Aligned_cols=204 Identities=18% Similarity=0.167 Sum_probs=158.4
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+..+|..++.+++||||+++++ ++.+.. .+|+|||| .|++|.+++.. ....+++..++.++.||+.||.|||++
T Consensus 55 ~~~~E~~~l~~l~h~~i~~~~~-~~~~~~---~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~ 130 (288)
T 3kfa_A 55 EFLKEAAVMKEIKHPNLVQLLG-VCTREP---PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 130 (288)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EECSSS---SEEEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCEeeEEE-EEccCC---CEEEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHC
Confidence 3347788999999999999999 554443 57999999 88999999954 445599999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+||+++.++.++|+|||.+.........
T Consensus 131 ~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~------------------------------------------- 167 (288)
T 3kfa_A 131 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT------------------------------------------- 167 (288)
T ss_dssp TCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSE-------------------------------------------
T ss_pred CccCCCCCcceEEEcCCCCEEEccCccceeccCCccc-------------------------------------------
Confidence 9999999999999999999999999988443211000
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhch
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
......+|+.|+|||++.+..++.++|||||||+
T Consensus 168 ----------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i 201 (288)
T 3kfa_A 168 ----------------------------------------------AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 201 (288)
T ss_dssp ----------------------------------------------EETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHH
T ss_pred ----------------------------------------------cccCCccccCcCChhhhccCCCCchhhHHHHHHH
Confidence 0001356889999999998889999999999999
Q ss_pred hhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 301 LFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 301 l~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
+|+|++ ||...... .....+.....++......+...+|+.+||.+||.+|||+.++++
T Consensus 202 l~~ll~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~ 264 (288)
T 3kfa_A 202 LWEIATYGMSPYPGIDLS-QVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 264 (288)
T ss_dssp HHHHHTTSCCSSTTCCGG-GHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHhCCCCCCCCCCHH-HHHHHHhccCCCCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHH
Confidence 999998 55443332 233333333222222223344559999999999999999999985
No 214
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=99.97 E-value=5.3e-31 Score=279.86 Aligned_cols=209 Identities=13% Similarity=0.071 Sum_probs=155.5
Q ss_pred hchhhhhhcccCCCCCceecccceeecCC-CCCcEEEEEec-CCCCHHHHHh-----CCCCCCCHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEA-AIDPFVHAIEW-GDVSLRQWLD-----KPKRSVDVYECLHIFRQIVEIVY 135 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~-~~~~~~lv~E~-~ggsL~~~L~-----~~~~~l~~~~~~~i~~QIl~aL~ 135 (720)
+..+|..++.+++||||+++++.+..... .....+++||| .+++|.+++. .....+++..++.++.||+.||.
T Consensus 82 ~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~ 161 (313)
T 3brb_A 82 EFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGME 161 (313)
T ss_dssp HHHHHHHHHHTCCCTTBCCCCEEEEC-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCCeeeeeEEEeeccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHH
Confidence 44478889999999999999994433222 22357999999 8899999983 23355999999999999999999
Q ss_pred HHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccC
Q 004989 136 AAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 215 (720)
Q Consensus 136 yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~ 215 (720)
|||++||+||||||+||+++.++.+||+|||++.........
T Consensus 162 ~LH~~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~-------------------------------------- 203 (313)
T 3brb_A 162 YLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYY-------------------------------------- 203 (313)
T ss_dssp HHHTTTCCCCCCSGGGEEECTTSCEEECSCSCC-----------------------------------------------
T ss_pred HHHhCCcccCCCCcceEEEcCCCcEEEeecCcceeccccccc--------------------------------------
Confidence 999999999999999999999999999999987432111000
Q ss_pred CCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccch
Q 004989 216 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIY 295 (720)
Q Consensus 216 ~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIw 295 (720)
.......+++.|+|||.+.+..++.++|||
T Consensus 204 --------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~ 233 (313)
T 3brb_A 204 --------------------------------------------------RQGRIAKMPVKWIAIESLADRVYTSKSDVW 233 (313)
T ss_dssp ---------------------------------------------------------CCGGGSCHHHHHSSCCCHHHHHH
T ss_pred --------------------------------------------------CcccccCCCccccCchhhcCCCccchhhhH
Confidence 000113568899999999998899999999
Q ss_pred hhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 296 RLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 296 SLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
||||++|+|++ ||...... .....+.....++......+...+|+.+||..||.+|||+.++++
T Consensus 234 slG~il~el~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~ 301 (313)
T 3brb_A 234 AFGVTMWEIATRGMTPYPGVQNH-EMYDYLLHGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRL 301 (313)
T ss_dssp HHHHHHHHHHTTSCCSSTTCCGG-GHHHHHHTTCCCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCccCCHH-HHHHHHHcCCCCCCCccccHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 99999999998 55544333 333344444333333333345569999999999999999999986
No 215
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=99.97 E-value=4.2e-31 Score=277.82 Aligned_cols=204 Identities=13% Similarity=0.115 Sum_probs=158.4
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++..++||||+++++ ++..+ .+++|||| .+++|.+++.... .+++..++.++.||+.||.|||++|
T Consensus 64 ~~~~e~~~l~~l~h~~i~~~~~-~~~~~----~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH~~~ 137 (291)
T 1xbb_A 64 ELLAEANVMQQLDNPYIVRMIG-ICEAE----SWMLVMEMAELGPLNKYLQQNR-HVKDKNIIELVHQVSMGMKYLEESN 137 (291)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEE-EEESS----SEEEEEECCTTEEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCEEEEEE-EECCC----CcEEEEEeCCCCCHHHHHHhCc-CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 4447888999999999999999 55332 57999999 8899999996543 4999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.++|+|||.+......... .
T Consensus 138 i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~--------------------------------~----------- 174 (291)
T 1xbb_A 138 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY--------------------------------Y----------- 174 (291)
T ss_dssp EECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSE--------------------------------E-----------
T ss_pred eEcCCCCcceEEEeCCCcEEEccCCcceeeccCCCc--------------------------------c-----------
Confidence 999999999999999999999999987443221000 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
. ......+|+.|+|||++.+..++.++|||||||++
T Consensus 175 ------------------------~--------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 210 (291)
T 1xbb_A 175 ------------------------K--------------------AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLM 210 (291)
T ss_dssp ------------------------E--------------------C----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHH
T ss_pred ------------------------c--------------------ccccCCCCceeeChHHhccCCCChhhhHHHHHHHH
Confidence 0 00012467899999999888899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|+|++ ||...... .....+.....++......+...+||.+||+.||.+||++.++++
T Consensus 211 ~~l~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~ 272 (291)
T 1xbb_A 211 WEAFSYGQKPYRGMKGS-EVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVEL 272 (291)
T ss_dssp HHHHTTTCCSSTTCCHH-HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred HHHHhcCCCCCCCCCHH-HHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 99997 66554443 344444444333322223344569999999999999999999985
No 216
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=99.97 E-value=1.3e-31 Score=287.17 Aligned_cols=206 Identities=16% Similarity=0.184 Sum_probs=158.2
Q ss_pred hchhhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC-------------CCCCCHHHHHHHH
Q 004989 63 RKHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-------------KRSVDVYECLHIF 127 (720)
Q Consensus 63 r~~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~-------------~~~l~~~~~~~i~ 127 (720)
+..+|..+|.++ +||||+++++ ++.... .+|+|||| .+++|.+++... ...+++..++.++
T Consensus 95 ~~~~E~~~l~~l~~h~~iv~~~~-~~~~~~---~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (333)
T 2i1m_A 95 ALMSELKIMSHLGQHENIVNLLG-ACTHGG---PVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFS 170 (333)
T ss_dssp HHHHHHHHHHHHCCCTTBCCEEE-EECSSS---SCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHH
T ss_pred HHHHHHHHHHhhcCCCCeeeEEE-EEecCC---ceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHH
Confidence 444788899999 8999999999 555443 57999999 788999999432 3358999999999
Q ss_pred HHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccc
Q 004989 128 RQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRR 207 (720)
Q Consensus 128 ~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l 207 (720)
.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 171 ~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~-------------------------------- 218 (333)
T 2i1m_A 171 SQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDS-------------------------------- 218 (333)
T ss_dssp HHHHHHHHHHHHTTEECSCCSGGGCEEEGGGEEEBCCCGGGCCGGGCT--------------------------------
T ss_pred HHHHHHHHHHhcCCcccCCcccceEEECCCCeEEECcccccccccccc--------------------------------
Confidence 999999999999999999999999999999999999998874321110
Q ss_pred cccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC
Q 004989 208 EDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP 287 (720)
Q Consensus 208 ~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 287 (720)
.. .......||+.|+|||++.+..
T Consensus 219 -~~-------------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~ 242 (333)
T 2i1m_A 219 -NY-------------------------------------------------------IVKGNARLPVKWMAPESIFDCV 242 (333)
T ss_dssp -TS-------------------------------------------------------EECSSCEECGGGSCHHHHHHCC
T ss_pred -ce-------------------------------------------------------eecCCCCCCccccCHHHhccCC
Confidence 00 0001135688999999999888
Q ss_pred CCccccchhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 288 VSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 288 ~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
++.++|||||||++|||++ ||............+.....++......+...+|+.+||+.||.+|||+.++++
T Consensus 243 ~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~ 319 (333)
T 2i1m_A 243 YTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICS 319 (333)
T ss_dssp CCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence 9999999999999999997 666554433333334333322222222344569999999999999999999986
No 217
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=99.97 E-value=1.1e-31 Score=280.08 Aligned_cols=201 Identities=16% Similarity=0.126 Sum_probs=152.1
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~-~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+..+|..++.+++||||+++++.++.... .+|++||| .+++|.+++.... ..+++..++.++.||+.||.|||++
T Consensus 60 ~~~~E~~~l~~l~h~~iv~~~~~~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~ 136 (278)
T 1byg_A 60 AFLAEASVMTQLRHSNLVQLLGVIVEEKG---GLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN 136 (278)
T ss_dssp HHHHTHHHHTTCCCTTBCCEEEEECCC-----CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCCCCCEeeEEEEEEcCCC---ceEEEEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhC
Confidence 34477889999999999999994343332 46999999 7889999995432 2379999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+||+++.++.++|+|||.+...+..
T Consensus 137 ~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~---------------------------------------------- 170 (278)
T 1byg_A 137 NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST---------------------------------------------- 170 (278)
T ss_dssp TCCCSCCSGGGEEECTTSCEEECCCCC-----------------------------------------------------
T ss_pred CccccCCCcceEEEeCCCcEEEeecccccccccc----------------------------------------------
Confidence 9999999999999999999999999887322110
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhch
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
.....+++.|+|||++.+..++.++|||||||+
T Consensus 171 -----------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i 203 (278)
T 1byg_A 171 -----------------------------------------------QDTGKLPVKWTAPEALREKKFSTKSDVWSFGIL 203 (278)
T ss_dssp ----------------------------------------------------CCTTTSCHHHHHHCCCCHHHHHHHHHHH
T ss_pred -----------------------------------------------ccCCCccccccCHHHhCCCCCCchhcHHHHHHH
Confidence 000246888999999988889999999999999
Q ss_pred hhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 301 LFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 301 l~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
+|||++ ||...... .....+.....++......+...+|+.+||+.||.+|||+.++++
T Consensus 204 l~~l~t~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~ 266 (278)
T 1byg_A 204 LWEIYSFGRVPYPRIPLK-DVVPRVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLRE 266 (278)
T ss_dssp HHHHHTTSCCSCTTSCGG-GHHHHHTTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHhCCCCCCCCCCHH-HHHHHHhcCCCCCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHH
Confidence 999997 55544332 333344433222222223344559999999999999999999985
No 218
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=99.97 E-value=2.8e-31 Score=283.23 Aligned_cols=207 Identities=17% Similarity=0.117 Sum_probs=156.6
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++||||+++++ ++.+.. ...+++|||| .+++|.+++.... +++.+++.++.||+.||.|||++|
T Consensus 79 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~i~~~l~~~l~~LH~~~ 154 (318)
T 3lxp_A 79 GWKQEIDILRTLYHEHIIKYKG-CCEDAG-AASLQLVMEYVPLGSLRDYLPRHS--IGLAQLLLFAQQICEGMAYLHAQH 154 (318)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EEEETT-TTEEEEEECCCTTCBHHHHGGGSC--CCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCcchhhEEE-EEecCC-CceEEEEEecccCCcHHHHHhhCC--CCHHHHHHHHHHHHHHHHHHHhCC
Confidence 4457888999999999999999 554432 2368999999 7899999996543 999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.++|+|||.+......... +
T Consensus 155 ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~--------------------------------~----------- 191 (318)
T 3lxp_A 155 YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEY--------------------------------Y----------- 191 (318)
T ss_dssp EECSCCSGGGEEECTTCCEEECCGGGCEECCTTCSE--------------------------------E-----------
T ss_pred ccCCCCchheEEEcCCCCEEECCccccccccccccc--------------------------------c-----------
Confidence 999999999999999999999999988443211000 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
.......||+.|+|||++.+..++.++|||||||++
T Consensus 192 --------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 227 (318)
T 3lxp_A 192 --------------------------------------------RVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTL 227 (318)
T ss_dssp --------------------------------------------EC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHH
T ss_pred --------------------------------------------ccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHH
Confidence 000113578899999999988899999999999999
Q ss_pred hhccc---cCCCCchH--------------HHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFC---PFSTGEEK--------------TRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt---pf~~~~~~--------------~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|+|++ ||...... ......+.....++......+...+||.+||+.||.+|||+.|+++
T Consensus 228 ~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~ 303 (318)
T 3lxp_A 228 YELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIP 303 (318)
T ss_dssp HHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhcccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 99999 44332111 1112222223333322233344569999999999999999999985
No 219
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=99.97 E-value=3.2e-31 Score=283.18 Aligned_cols=205 Identities=18% Similarity=0.248 Sum_probs=157.5
Q ss_pred hchhhhhhcccCC--CCCceecccceeecCCCCCcEEEEEec-CC-CCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGD--HLRNQGGLSGVCENEAAIDPFVHAIEW-GD-VSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 63 r~~~e~~~L~~l~--HpnIV~l~~~~~~~~~~~~~~~lv~E~-~g-gsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
+..+|..++.++. ||||+++++ ++.... .++++||+ .+ ++|.+++... ..+++..++.++.||+.||.|||
T Consensus 92 ~~~~E~~~l~~l~~~~~~i~~~~~-~~~~~~---~~~lv~e~~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~~L~~LH 166 (320)
T 3a99_A 92 RVPMEVVLLKKVSSGFSGVIRLLD-WFERPD---SFVLILERPEPVQDLFDFITER-GALQEELARSFFWQVLEAVRHCH 166 (320)
T ss_dssp EEEHHHHHHHHHCSSSCSBCCEEE-EEECSS---EEEEEEECCSSEEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhccCCCCceEEEE-EEecCC---cEEEEEEcCCCCccHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHH
Confidence 3446777888875 599999999 555443 57999999 44 8999999554 34999999999999999999999
Q ss_pred HCCceeccCCCCcEEEc-cCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCC
Q 004989 139 SQGIVVHNVRPSCFVMS-SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~-~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~ 217 (720)
++||+||||||+|||++ .++.+||+|||++.......
T Consensus 167 ~~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~~~~~~~------------------------------------------ 204 (320)
T 3a99_A 167 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV------------------------------------------ 204 (320)
T ss_dssp HTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCSSC------------------------------------------
T ss_pred HCCcEeCCCCHHHEEEeCCCCCEEEeeCcccccccccc------------------------------------------
Confidence 99999999999999999 78899999988874321100
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCC-Cccccchh
Q 004989 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYR 296 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~-s~~sDIwS 296 (720)
.....||+.|+|||++.+..+ +.++||||
T Consensus 205 --------------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~~Di~s 234 (320)
T 3a99_A 205 --------------------------------------------------YTDFDGTRVYSPPEWIRYHRYHGRSAAVWS 234 (320)
T ss_dssp --------------------------------------------------BCCCCSCGGGSCHHHHHHSCBCHHHHHHHH
T ss_pred --------------------------------------------------ccCCCCCccCCChHHhccCCCCCccchHHh
Confidence 001368999999999987765 78999999
Q ss_pred hhchhhhccccCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCCccc
Q 004989 297 LGVLLFELFCPFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 297 LGvll~eLltpf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
|||++|||+++..++....... ..... +.... +...+||.+||+.||.+|||+.|+++||||+....+
T Consensus 235 lG~il~el~~g~~pf~~~~~~~---~~~~~---~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~hp~~~~~~~~ 303 (320)
T 3a99_A 235 LGILLYDMVCGDIPFEHDEEII---RGQVF---FRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLP 303 (320)
T ss_dssp HHHHHHHHHHSSCSCCSHHHHH---HCCCC---CSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSCCCH
T ss_pred HHHHHHHHHHCCCCCCChhhhh---ccccc---ccccCCHHHHHHHHHHccCChhhCcCHHHHhcCHhhcCccCc
Confidence 9999999999433332222211 11111 11223 344599999999999999999999999999987543
No 220
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=99.97 E-value=2e-31 Score=285.27 Aligned_cols=212 Identities=15% Similarity=0.152 Sum_probs=160.3
Q ss_pred hhhchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC------CCCCHHHHHHHHHHHHHH
Q 004989 61 ELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK------RSVDVYECLHIFRQIVEI 133 (720)
Q Consensus 61 ~~r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~------~~l~~~~~~~i~~QIl~a 133 (720)
..+..+|..++.+++||||+++++ ++.... .+|+|||| .|++|.+++.... ..+++.+++.++.||+.|
T Consensus 77 ~~~~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~a 152 (327)
T 2yfx_A 77 ELDFLMEALIISKFNHQNIVRCIG-VSLQSL---PRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 152 (327)
T ss_dssp HHHHHHHHHHHHHCCCTTBCCEEE-EECSSS---SCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhCCCCCCCeEEE-EEcCCC---CcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHH
Confidence 335557888999999999999999 554443 46999999 7999999995432 348999999999999999
Q ss_pred HHHHHHCCceeccCCCCcEEEcc---CCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhccccccc
Q 004989 134 VYAAHSQGIVVHNVRPSCFVMSS---FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDL 210 (720)
Q Consensus 134 L~yLHs~gIvHrDLKP~NILl~~---~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Df 210 (720)
|.|||++||+||||||+|||++. ...++|+|||.+........ .
T Consensus 153 l~~LH~~~i~H~dlkp~NIli~~~~~~~~~kl~Dfg~~~~~~~~~~---------------------------------~ 199 (327)
T 2yfx_A 153 CQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASY---------------------------------Y 199 (327)
T ss_dssp HHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHC-------------------------------------
T ss_pred HHHHhhCCeecCcCCHhHEEEecCCCcceEEECccccccccccccc---------------------------------c
Confidence 99999999999999999999984 44699998887732110000 0
Q ss_pred ccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCc
Q 004989 211 QLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSC 290 (720)
Q Consensus 211 gla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~ 290 (720)
.......||+.|+|||++.+..++.
T Consensus 200 -------------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~ 224 (327)
T 2yfx_A 200 -------------------------------------------------------RKGGCAMLPVKWMPPEAFMEGIFTS 224 (327)
T ss_dssp ---------------------------------------------------------CCGGGSCGGGCCHHHHHHCCCCH
T ss_pred -------------------------------------------------------ccCCCcCCCcceeCHhHhcCCCCCc
Confidence 0001136789999999998888999
Q ss_pred cccchhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccC
Q 004989 291 ASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLN 365 (720)
Q Consensus 291 ~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~ 365 (720)
++|||||||++|+|++ ||...... .....+.....++......+...+||.+||+.||.+|||+.+++++.++.
T Consensus 225 ~~Di~slG~il~ellt~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~ 302 (327)
T 2yfx_A 225 KTDTWSFGVLLWEIFSLGYMPYPSKSNQ-EVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC 302 (327)
T ss_dssp HHHHHHHHHHHHHHHTTSCCSSTTCCHH-HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHcCCCCCCCCcCHH-HHHHHHhcCCCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence 9999999999999997 55554333 34444444333322222334455999999999999999999999976643
No 221
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.97 E-value=1.2e-30 Score=303.29 Aligned_cols=205 Identities=14% Similarity=0.113 Sum_probs=159.5
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++|||||++++ ++..+ .+|+|||| .+++|.++|......+++..++.|+.||+.||.|||++|
T Consensus 382 ~~~~E~~il~~l~hpniv~l~~-~~~~~----~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ 456 (613)
T 2ozo_A 382 EMMREAQIMHQLDNPYIVRLIG-VCQAE----ALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN 456 (613)
T ss_dssp HHHHHHHHHTTCCCTTBCCEEE-EEESS----SEEEEEECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCEeeEEE-EeccC----CeEEEEEeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3447888999999999999999 55543 47999999 899999999666667999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
||||||||+|||++.++.+||+|||+++..+..... +
T Consensus 457 iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~--------------------------------~----------- 493 (613)
T 2ozo_A 457 FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSY--------------------------------Y----------- 493 (613)
T ss_dssp CCCSCCSGGGEEEEETTEEEECCCSTTTTCC-------------------------------------------------
T ss_pred EEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCce--------------------------------e-----------
Confidence 999999999999999999999999988543221000 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
.......+|+.|+|||++.+..++.++|||||||+|
T Consensus 494 --------------------------------------------~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l 529 (613)
T 2ozo_A 494 --------------------------------------------TARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTM 529 (613)
T ss_dssp ----------------------------------------------------CCTTSCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred --------------------------------------------eeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHH
Confidence 000012457899999999988899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||...... ..+..+..+..++......+...+||.+||+.||.+||++.+|++
T Consensus 530 ~ellt~G~~Pf~~~~~~-~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~ 591 (613)
T 2ozo_A 530 WEALSYGQKPYKKMKGP-EVMAFIEQGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQ 591 (613)
T ss_dssp HHHHTTSCCTTTTCCSH-HHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHH
T ss_pred HHHHHCCCCCCCCCCHH-HHHHHHHcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 99997 67665443 344445444333322223344559999999999999999999874
No 222
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=99.97 E-value=1.1e-30 Score=276.90 Aligned_cols=204 Identities=17% Similarity=0.233 Sum_probs=153.8
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~---~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
+..+|..++.+++||||+++++ ++.... .++++||| .+++|.+++.. ....+++..++.++.||+.||.|||
T Consensus 78 ~~~~E~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH 153 (310)
T 2wqm_A 78 DCIKEIDLLKQLNHPNVIKYYA-SFIEDN---ELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH 153 (310)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEE-EEEETT---EEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCEeeEEE-EEEcCC---cEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHh
Confidence 4457888999999999999999 444433 67999999 88899999943 3455999999999999999999999
Q ss_pred HCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCC
Q 004989 139 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
++||+||||||+||+++.++.++|+|||++........
T Consensus 154 ~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~~~------------------------------------------ 191 (310)
T 2wqm_A 154 SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT------------------------------------------ 191 (310)
T ss_dssp HTTCCCCCCCGGGEEECTTSCEEECCC-----------------------------------------------------
T ss_pred hCCeeCCCCcHHHEEEcCCCCEEEEeccceeeecCCCc------------------------------------------
Confidence 99999999999999999999999999988743211100
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhh
Q 004989 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
......||+.|+|||++.+..++.++||||||
T Consensus 192 ------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG 223 (310)
T 2wqm_A 192 ------------------------------------------------AAHSLVGTPYYMSPERIHENGYNFKSDIWSLG 223 (310)
T ss_dssp -------------------------------------------------------CCSSCCHHHHTTCCCCHHHHHHHHH
T ss_pred ------------------------------------------------cccccCCCeeEeChHHhCCCCCCchhhHHHHH
Confidence 00013679999999999998899999999999
Q ss_pred chhhhccc---cCCCCc-hHHHHHHHhhcCCCCccccccCch-HHHHHHHcCCCCCCCCCChHHHHc
Q 004989 299 VLLFELFC---PFSTGE-EKTRTMSSLRHRVLPPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 299 vll~eLlt---pf~~~~-~~~~~~~~l~~~~~p~~~~~~~p~-~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|++|+|++ ||.... ........+....+++.....++. ..+|+.+||+.||.+|||+.++++
T Consensus 224 ~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~ 290 (310)
T 2wqm_A 224 CLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYD 290 (310)
T ss_dssp HHHHHHHHSSCTTC---CCHHHHHHHHHTTCSCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHhCCCCCcccchhHHHHHHHhhcccCCCCcccccCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 99999999 665432 222334444444444443344444 459999999999999999999986
No 223
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.97 E-value=3.2e-32 Score=287.09 Aligned_cols=208 Identities=12% Similarity=0.119 Sum_probs=138.3
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH-----
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAH----- 138 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLH----- 138 (720)
+.+......++||||+++++.+.........+++|||| .+++|.+++.+. .+++..++.++.||+.||.|||
T Consensus 45 e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~i~~~l~~lH~~~~~ 122 (303)
T 3gxj_A 45 EAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVG 122 (303)
T ss_dssp HHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEEEEECCTTCCHHHHHHHC--CBCC-CHHHHC-CHHHHHC-CCCCBCS
T ss_pred HHHHHHHHhccCcceeeeeeecccCCCccceeEEEEeccCCCCHHHHHhcc--CcchHHHHHHHHHHHHHHHHHHHHHhh
Confidence 34444444489999999999544444443468999999 888999999554 3888999999999999999999
Q ss_pred ---HCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccC
Q 004989 139 ---SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 215 (720)
Q Consensus 139 ---s~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~ 215 (720)
++||+||||||+|||++.++.+||+|||++......... .
T Consensus 123 ~~~~~~ivH~Dlkp~Nil~~~~~~~kl~DFg~a~~~~~~~~~--------------------------------~----- 165 (303)
T 3gxj_A 123 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDT--------------------------------I----- 165 (303)
T ss_dssp TTCBC-CCCSCCCGGGC-CCTTCCC-BCCCCC-CCEETTTTE--------------------------------E-----
T ss_pred hccCCCEeeCcCCHHHeEECCCCCEEEeecCcceeccCCCcc--------------------------------c-----
Confidence 999999999999999999999999999987432111000 0
Q ss_pred CCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC------CCC
Q 004989 216 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA------PVS 289 (720)
Q Consensus 216 ~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~------~~s 289 (720)
........||+.|+|||++.+. .++
T Consensus 166 -------------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~ 196 (303)
T 3gxj_A 166 -------------------------------------------------DIAPNHRVGTKRYMAPEVLDDSINMKHFESF 196 (303)
T ss_dssp -------------------------------------------------SCC-----CCGGGCCHHHHTTCSCTTCHHHH
T ss_pred -------------------------------------------------ccccCCCCcCccccCHhhhcCcccccccccC
Confidence 0000114689999999999876 345
Q ss_pred ccccchhhhchhhhcccc-------------CCCCc----hHHHHHHHhhcCCCCccccccC------chHHHHHHHcCC
Q 004989 290 CASDIYRLGVLLFELFCP-------------FSTGE----EKTRTMSSLRHRVLPPQLLLKF------PKEASFCLWLLH 346 (720)
Q Consensus 290 ~~sDIwSLGvll~eLltp-------------f~~~~----~~~~~~~~l~~~~~p~~~~~~~------p~~~~Li~~~L~ 346 (720)
.++|||||||++|||+++ |.... ........+......+.+...+ +...+|+.+||+
T Consensus 197 ~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 276 (303)
T 3gxj_A 197 KRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWY 276 (303)
T ss_dssp HHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTCC-CCCCC-CHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCC
T ss_pred cchhHHHHHHHHHHHHhcCCCccccceeeccccccCCCCccHHHHHHHHHHhhcCCCccccccchhhHHHHHHHHHHHhc
Confidence 789999999999999973 22110 1112222233333333332221 134599999999
Q ss_pred CCCCCCCChHHHHc
Q 004989 347 PEPSGRPKMGELLQ 360 (720)
Q Consensus 347 ~dP~~Rpta~eiL~ 360 (720)
.||.+|||+.++++
T Consensus 277 ~dP~~Rps~~~i~~ 290 (303)
T 3gxj_A 277 ANGAARLTALRIKK 290 (303)
T ss_dssp SSGGGSCCHHHHHH
T ss_pred cCcccCCCHHHHHH
Confidence 99999999999986
No 224
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=99.97 E-value=3.2e-31 Score=284.19 Aligned_cols=216 Identities=12% Similarity=0.107 Sum_probs=153.0
Q ss_pred hhhchhhhhhcccCCCCCceecccceee-cCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 004989 61 ELRKHSDGVELTHGDHLRNQGGLSGVCE-NEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 61 ~~r~~~e~~~L~~l~HpnIV~l~~~~~~-~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
.+..+.+...+..++||||+++++.+.. .......+|+|||| .+++|.+++.... .++..++.++.||+.||.|||
T Consensus 51 ~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~i~~qi~~~L~~LH 128 (336)
T 3g2f_A 51 NFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHT--SDWVSSCRLAHSVTRGLAYLH 128 (336)
T ss_dssp HHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEEECCCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhccCcchhhheecccccccCCCceEEEEEecCCCCcHHHHHhhcc--cchhHHHHHHHHHHHHHHHHH
Confidence 3445566666778999999999973322 22223357999999 7999999996544 589999999999999999999
Q ss_pred HC---------CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccc
Q 004989 139 SQ---------GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRRED 209 (720)
Q Consensus 139 s~---------gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~D 209 (720)
++ ||+||||||+|||++.++.+||+|||++........... ..
T Consensus 129 ~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG~a~~~~~~~~~~~----------------------------~~ 180 (336)
T 3g2f_A 129 TELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRP----------------------------GE 180 (336)
T ss_dssp CCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCTTCEECSSSSCC--------------------------------
T ss_pred hhhccccccccceeecccccceEEEcCCCcEEEeeccceeecccccccCc----------------------------cc
Confidence 99 999999999999999999999999998854322110000 00
Q ss_pred cccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC----
Q 004989 210 LQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG---- 285 (720)
Q Consensus 210 fgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~---- 285 (720)
.........||+.|+|||++.+
T Consensus 181 ------------------------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~ 206 (336)
T 3g2f_A 181 ------------------------------------------------------EDNAAISEVGTIRYMAPEVLEGAVNL 206 (336)
T ss_dssp -----------------------------------------------------------CCTTSCGGGCCHHHHTTCCCG
T ss_pred ------------------------------------------------------cccccccCCCccceeCchhhcCCccc
Confidence 0000112478999999999987
Q ss_pred ---CCCCccccchhhhchhhhccc---cCCCCch-----------------HHHHHHHhhcCCCCccccccCc-------
Q 004989 286 ---APVSCASDIYRLGVLLFELFC---PFSTGEE-----------------KTRTMSSLRHRVLPPQLLLKFP------- 335 (720)
Q Consensus 286 ---~~~s~~sDIwSLGvll~eLlt---pf~~~~~-----------------~~~~~~~l~~~~~p~~~~~~~p------- 335 (720)
..++.++|||||||++|||++ ||.+... .......+......+.++..++
T Consensus 207 ~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (336)
T 3g2f_A 207 RDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVR 286 (336)
T ss_dssp GGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHH
T ss_pred ccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHH
Confidence 346789999999999999997 4432111 1111122222222333333222
Q ss_pred hHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 336 KEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 336 ~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
...+||.+||+.||++|||+.|+++
T Consensus 287 ~l~~li~~cl~~dP~~Rps~~e~l~ 311 (336)
T 3g2f_A 287 SLKETIEDCWDQDAEARLTAQXAEE 311 (336)
T ss_dssp HHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHHhcCChhhCcchHHHHH
Confidence 3569999999999999999999965
No 225
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=99.97 E-value=6.4e-31 Score=298.10 Aligned_cols=203 Identities=19% Similarity=0.170 Sum_probs=158.3
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
..+|..+|.+++|||||++++ ++.... .+|+|||| .+++|.++|.. ....+++..++.|+.||+.||.|||++|
T Consensus 263 ~~~E~~~l~~l~hpniv~l~~-~~~~~~---~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ 338 (495)
T 1opk_A 263 FLKEAAVMKEIKHPNLVQLLG-VCTREP---PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN 338 (495)
T ss_dssp HHHHHHHHHHCCCTTBCCEEE-EECSSS---SCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhcCCCCEeeEEE-EEecCC---cEEEEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 347888999999999999999 555443 57999999 88999999954 3445899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||+++........
T Consensus 339 ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~-------------------------------------------- 374 (495)
T 1opk_A 339 FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYT-------------------------------------------- 374 (495)
T ss_dssp EECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEE--------------------------------------------
T ss_pred cccCCCChhhEEECCCCcEEEeecccceeccCCcee--------------------------------------------
Confidence 999999999999999999999999987443111000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......+++.|+|||++.+..++.++|||||||+|
T Consensus 375 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l 409 (495)
T 1opk_A 375 ---------------------------------------------AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLL 409 (495)
T ss_dssp ---------------------------------------------CCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHH
T ss_pred ---------------------------------------------ecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHH
Confidence 00002457889999999988899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||...... .....+......+......+...+||.+||+.||.+|||+.+|++
T Consensus 410 ~el~t~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~ 471 (495)
T 1opk_A 410 WEIATYGMSPYPGIDLS-QVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 471 (495)
T ss_dssp HHHHTTSCCSSTTCCGG-GHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHhCCCCCCCCCCHH-HHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHH
Confidence 99998 66554433 333344433322222223344559999999999999999999986
No 226
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=99.97 E-value=8.2e-31 Score=281.47 Aligned_cols=205 Identities=16% Similarity=0.173 Sum_probs=159.1
Q ss_pred hchhhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC---------------CCCCHHHHHH
Q 004989 63 RKHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---------------RSVDVYECLH 125 (720)
Q Consensus 63 r~~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~---------------~~l~~~~~~~ 125 (720)
+..+|..++.++ +||||+++++ ++.... .+|+|||| .+++|.+++.... ..+++.+++.
T Consensus 86 ~~~~E~~~l~~l~~hp~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (334)
T 2pvf_A 86 DLVSEMEMMKMIGKHKNIINLLG-ACTQDG---PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161 (334)
T ss_dssp HHHHHHHHHHHHCCCTTBCCEEE-EECSSS---CCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHH
T ss_pred HHHHHHHHHHHhhcCCCEeeEEE-EEccCC---ceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHH
Confidence 444788889988 8999999999 554443 57999999 8899999995433 2489999999
Q ss_pred HHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcc
Q 004989 126 IFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRL 205 (720)
Q Consensus 126 i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 205 (720)
++.||+.||.|||++||+||||||+|||++.++.+||+|||++...+....
T Consensus 162 i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~----------------------------- 212 (334)
T 2pvf_A 162 CTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDY----------------------------- 212 (334)
T ss_dssp HHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECTTTSS-----------------------------
T ss_pred HHHHHHHHHHHHHhCCeeCCCCccceEEEcCCCCEEEcccccccccccccc-----------------------------
Confidence 999999999999999999999999999999999999999998743321100
Q ss_pred cccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC
Q 004989 206 RREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG 285 (720)
Q Consensus 206 ~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 285 (720)
+ .......+|+.|+|||++.+
T Consensus 213 ----~-------------------------------------------------------~~~~~~~~~~~y~aPE~~~~ 233 (334)
T 2pvf_A 213 ----Y-------------------------------------------------------KKTTNGRLPVKWMAPEALFD 233 (334)
T ss_dssp ----E-------------------------------------------------------ECCSCCCCCGGGCCHHHHHH
T ss_pred ----c-------------------------------------------------------cccCCCCcccceeChHHhcC
Confidence 0 00001356889999999988
Q ss_pred CCCCccccchhhhchhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 286 APVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 286 ~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
..++.++|||||||++|||++ ||...... .....+.....++......+...+|+.+||+.||.+|||+.|+++
T Consensus 234 ~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 311 (334)
T 2pvf_A 234 RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE-ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311 (334)
T ss_dssp CEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHH-HHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHH-HHHHHHhcCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 889999999999999999998 56554332 344444444333333333345569999999999999999999986
No 227
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=99.97 E-value=4.2e-31 Score=296.36 Aligned_cols=203 Identities=13% Similarity=0.133 Sum_probs=158.1
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+..+|..+|.+++|||||++++ ++... .+|+|||| .+++|.++|... ...+++..++.++.||+.||.|||++
T Consensus 229 ~~~~E~~~l~~l~h~~iv~l~~-~~~~~----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~ 303 (454)
T 1qcf_A 229 AFLAEANVMKTLQHDKLVKLHA-VVTKE----PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR 303 (454)
T ss_dssp HHHHHHHHHTTCCCTTBCCEEE-EECSS----SCEEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhhCCCCCEeeEEE-EEeCC----ccEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 3447888999999999999999 55422 47999999 899999999543 23589999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+|||++.++.+||+|||+++...... +
T Consensus 304 ~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~----------------------------------~---------- 339 (454)
T 1qcf_A 304 NYIHRDLRAANILVSASLVCKIADFGLARVIEDNE----------------------------------Y---------- 339 (454)
T ss_dssp TCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHH----------------------------------H----------
T ss_pred CccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCc----------------------------------e----------
Confidence 99999999999999999999999998874321100 0
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhch
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
. ......+|+.|+|||++.+..++.++|||||||+
T Consensus 340 --------------------------~-------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~ 374 (454)
T 1qcf_A 340 --------------------------T-------------------AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGIL 374 (454)
T ss_dssp --------------------------H-------------------TTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHH
T ss_pred --------------------------e-------------------ccCCCcccccccCHHHhccCCCCcHHHHHhHHHH
Confidence 0 0000245788999999998889999999999999
Q ss_pred hhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 301 LFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 301 l~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
||||++ ||...... .....+..+..++......+...+||.+||+.||.+|||+.+|+.
T Consensus 375 l~el~t~g~~P~~~~~~~-~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~ 437 (454)
T 1qcf_A 375 LMEIVTYGRIPYPGMSNP-EVIRALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQS 437 (454)
T ss_dssp HHHHHTTSCCSSTTCCHH-HHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHhCCCCCCCCCCHH-HHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHH
Confidence 999998 67665443 344444444333332233344559999999999999999999975
No 228
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=99.97 E-value=7.3e-31 Score=273.92 Aligned_cols=203 Identities=15% Similarity=0.149 Sum_probs=157.0
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~-~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+..+|..+|.+++||||+++++ ++..+ .++++||| .+++|.+++.... ..+++.+++.++.||+.||.|||++
T Consensus 54 ~~~~E~~~l~~l~h~~i~~~~~-~~~~~----~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~ 128 (279)
T 1qpc_A 54 AFLAEANLMKQLQHQRLVRLYA-VVTQE----PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 128 (279)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EECSS----SCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCCCcCcceEEE-EEcCC----CcEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 3447788999999999999999 55433 36899999 7999999995432 2589999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+||+++.++.++|+|||.+.........
T Consensus 129 ~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~------------------------------------------- 165 (279)
T 1qpc_A 129 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT------------------------------------------- 165 (279)
T ss_dssp TEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEE-------------------------------------------
T ss_pred CeeccCCCHhhEEEcCCCCEEECCCcccccccCcccc-------------------------------------------
Confidence 9999999999999999999999999887432111000
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhch
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
......+|+.|+|||++.+..++.++|||||||+
T Consensus 166 ----------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i 199 (279)
T 1qpc_A 166 ----------------------------------------------AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 199 (279)
T ss_dssp ----------------------------------------------CCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHH
T ss_pred ----------------------------------------------cccCCCCccCccChhhhccCCCCchhhhHHHHHH
Confidence 0001346889999999988889999999999999
Q ss_pred hhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 301 LFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 301 l~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
+|||++ ||...... .....+.....+.......+...+|+.+||..||.+|||+.++++
T Consensus 200 l~el~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~ 262 (279)
T 1qpc_A 200 LTEIVTHGRIPYPGMTNP-EVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRS 262 (279)
T ss_dssp HHHHHTTTCCSSTTCCHH-HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHhCCCCCCcccCHH-HHHHHHhcccCCCCcccccHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 999998 56554443 344444443322222223344559999999999999999999985
No 229
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=99.97 E-value=7.9e-31 Score=277.54 Aligned_cols=205 Identities=14% Similarity=0.146 Sum_probs=152.9
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC--CCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK--PKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~--~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
+..+|..++.+++||||+++++ ++.+.. ..+++||| .+++|.+++.. ....+++..++.++.||+.||.|||+
T Consensus 76 ~~~~E~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~ 151 (307)
T 2nru_A 76 QFDQEIKVMAKCQHENLVELLG-FSSDGD---DLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHE 151 (307)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EECSSS---SCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCeEEEEE-EEecCC---ceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 4447888999999999999999 554443 56999999 79999999943 23459999999999999999999999
Q ss_pred CCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCC
Q 004989 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||+||||||+||+++.++.++|+|||.+...+.....
T Consensus 152 ~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~------------------------------------------ 189 (307)
T 2nru_A 152 NHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQT------------------------------------------ 189 (307)
T ss_dssp TTEECSCCCGGGEEECTTCCEEECCCTTCEECCSCSSC------------------------------------------
T ss_pred CCeecCCCCHHHEEEcCCCcEEEeeccccccccccccc------------------------------------------
Confidence 99999999999999999999999999887432111000
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhc
Q 004989 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
.......||+.|+|||++.+. ++.++|||||||
T Consensus 190 ----------------------------------------------~~~~~~~g~~~y~aPE~~~~~-~~~~~Dv~slG~ 222 (307)
T 2nru_A 190 ----------------------------------------------VMTSRIVGTTAYMAPEALRGE-ITPKSDIYSFGV 222 (307)
T ss_dssp ----------------------------------------------EECSSCCSCGGGCCHHHHTTE-ECTHHHHHHHHH
T ss_pred ----------------------------------------------ccccccCCCcCcCChHHhcCC-CCccchhHHHHH
Confidence 000114689999999998764 899999999999
Q ss_pred hhhhccc---cCCCCchH---HHHHHHhhc----------CCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 300 LLFELFC---PFSTGEEK---TRTMSSLRH----------RVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~---~~~~~~l~~----------~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
++|+|++ ||...... ......+.. ..+++......+...+|+.+||+.||.+|||+.++++
T Consensus 223 il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~ 299 (307)
T 2nru_A 223 VLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQ 299 (307)
T ss_dssp HHHHHHHCCCSBCTTBSSSBTTHHHHHHHTTSCCHHHHSCSSCSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred HHHHHHHCCCCcccCcchHHHHHHHHHhhhhhhhhhhhccccccccchHHHHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 9999999 56543221 111111111 1111111111123458999999999999999999986
No 230
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=99.97 E-value=1.5e-30 Score=273.37 Aligned_cols=211 Identities=17% Similarity=0.146 Sum_probs=156.9
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..+|..++..+.|++++..+..++.... ..+++|||.+++|.+++......+++.+++.++.||+.||.|||++||+
T Consensus 51 ~~~e~~~l~~l~~~~~i~~~~~~~~~~~---~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~iv 127 (296)
T 4hgt_A 51 LHIESKIYKMMQGGVGIPTIRWCGAEGD---YNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFI 127 (296)
T ss_dssp HHHHHHHHHHHTTSTTCCCEEEEEEETT---EEEEEEECCCCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHHHhcCCCCCCeeeeecCCCC---ceEEEEEccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 3467778899999999988884444433 6799999999999999975556699999999999999999999999999
Q ss_pred eccCCCCcEEE---ccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 144 VHNVRPSCFVM---SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 144 HrDLKP~NILl---~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||||||+|||+ +.++.+||+|||.+........... .
T Consensus 128 H~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~------------------------------~---------- 167 (296)
T 4hgt_A 128 HRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQH------------------------------I---------- 167 (296)
T ss_dssp CSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCB------------------------------C----------
T ss_pred cCCCCHHHeeeeccCCCCeEEEecCccceeccCcccCcc------------------------------C----------
Confidence 99999999999 7889999999998854322210000 0
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhch
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
. ........||+.|+|||++.+..++.++|||||||+
T Consensus 168 ------------------------------------------~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~i 204 (296)
T 4hgt_A 168 ------------------------------------------P-YRENKNLTGTARYASINTHLGIEQSRRDDLESLGYV 204 (296)
T ss_dssp ------------------------------------------C-CCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHH
T ss_pred ------------------------------------------C-CCcccccCCCccccchHHhcCCCCCchhHHHHHHHH
Confidence 0 000012478999999999999999999999999999
Q ss_pred hhhccc---cCCCCchH--HHHHHHhhc---CCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 301 LFELFC---PFSTGEEK--TRTMSSLRH---RVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 301 l~eLlt---pf~~~~~~--~~~~~~l~~---~~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
+|||++ ||...... ...+..+.. ....+.....+| ...+|+.+||+.||.+|||+.++++
T Consensus 205 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~ 273 (296)
T 4hgt_A 205 LMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQ 273 (296)
T ss_dssp HHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHH
T ss_pred HHHHhcCCCCCcccchhhhhhhhhhhhcccccchhhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHH
Confidence 999999 67543211 011111111 111112223334 4559999999999999999999986
No 231
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=99.97 E-value=1.1e-30 Score=304.61 Aligned_cols=203 Identities=13% Similarity=0.110 Sum_probs=157.5
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..+|.+++|||||++++ +++.+ .+++|||| .+++|.++|... ..+++..++.|+.||+.||.|||++||
T Consensus 417 ~~~E~~il~~l~hpnIv~l~~-~~~~~----~~~lv~E~~~~g~L~~~l~~~-~~l~~~~~~~i~~qi~~~L~yLH~~~i 490 (635)
T 4fl3_A 417 LLAEANVMQQLDNPYIVRMIG-ICEAE----SWMLVMEMAELGPLNKYLQQN-RHVKDKNIIELVHQVSMGMKYLEESNF 490 (635)
T ss_dssp HHHHHHHHHHCCCTTBCCEEE-EEESS----SEEEEEECCTTEEHHHHHHHC-TTCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhCCCCCEeeEEE-EEecC----CEEEEEEccCCCCHHHHHhhC-CCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence 347888999999999999999 66543 47899999 899999999554 349999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcc
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
|||||||+||||+.++.+||+|||+++....... +
T Consensus 491 iHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~---------------------------------~------------ 525 (635)
T 4fl3_A 491 VHRDLAARNVLLVTQHYAKISDFGLSKALRADEN---------------------------------Y------------ 525 (635)
T ss_dssp CCSCCSGGGEEEEETTEEEECCTTHHHHTTC-------------------------------------------------
T ss_pred eCCCCChHhEEEeCCCCEEEEEcCCccccccCcc---------------------------------c------------
Confidence 9999999999999999999999998854321100 0
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchhh
Q 004989 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
........||+.|+|||++.+..++.++|||||||++|
T Consensus 526 ------------------------------------------~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ 563 (635)
T 4fl3_A 526 ------------------------------------------YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMW 563 (635)
T ss_dssp ---------------------------------------------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred ------------------------------------------cccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHH
Confidence 00001134688999999999888999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 303 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
||++ ||...... .....+..+..++......+...+||.+||+.||.+||++.+|++
T Consensus 564 ellt~G~~Pf~~~~~~-~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~ 624 (635)
T 4fl3_A 564 EAFSYGQKPYRGMKGS-EVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVEL 624 (635)
T ss_dssp HHHTTTCCSSTTCCHH-HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred HHHhCCCCCCCCCCHH-HHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence 9997 67665443 344444444333322223344559999999999999999999975
No 232
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=99.97 E-value=8.8e-31 Score=293.56 Aligned_cols=207 Identities=14% Similarity=0.153 Sum_probs=158.0
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
..+|..+|.+++||||+++++ ++..+ .+|+|||| .+++|.++|.. .+..+++.+++.++.||+.||.|||++|
T Consensus 226 ~~~E~~~l~~l~hp~iv~~~~-~~~~~----~~~iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ 300 (452)
T 1fmk_A 226 FLQEAQVMKKLRHEKLVQLYA-VVSEE----PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN 300 (452)
T ss_dssp HHHHHHHHHHCCCTTBCCEEE-EECSS----SCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhCCCCCEeeEEE-EEcCC----ceEEEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 347888999999999999999 55442 47999999 88999999943 2345899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||+++........
T Consensus 301 ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~-------------------------------------------- 336 (452)
T 1fmk_A 301 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT-------------------------------------------- 336 (452)
T ss_dssp CCCSCCSGGGEEECGGGCEEECCCCTTC----------------------------------------------------
T ss_pred eeCCCCChhhEEECCCCCEEECCCccceecCCCcee--------------------------------------------
Confidence 999999999999999999999999987432111000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......+|+.|+|||++.+..++.++|||||||++
T Consensus 337 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l 371 (452)
T 1fmk_A 337 ---------------------------------------------ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILL 371 (452)
T ss_dssp ---------------------------------------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred ---------------------------------------------cccCCcccccccCHhHHhcCCCCccccHHhHHHHH
Confidence 00012467889999999988899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHc--CcccCC
Q 004989 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQ--SEFLNE 366 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~--hp~~~~ 366 (720)
|||++ ||...... .....+..+..++.. ..+| ...+||.+||+.||.+|||+.++++ ..++..
T Consensus 372 ~el~t~g~~P~~~~~~~-~~~~~i~~~~~~~~~-~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~ 441 (452)
T 1fmk_A 372 TELTTKGRVPYPGMVNR-EVLDQVERGYRMPCP-PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 441 (452)
T ss_dssp HHHHTTTCCSSTTCCHH-HHHHHHHTTCCCCCC-TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSC
T ss_pred HHHHhCCCCCCCCCCHH-HHHHHHHcCCCCCCC-CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhcc
Confidence 99998 66655443 344444444333322 3344 4559999999999999999999986 344443
No 233
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=99.97 E-value=1.1e-30 Score=277.14 Aligned_cols=205 Identities=18% Similarity=0.271 Sum_probs=153.5
Q ss_pred hchhhhhhcccC----CCCCceecccceeecCCCCCcEEEEEec--CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHG----DHLRNQGGLSGVCENEAAIDPFVHAIEW--GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYA 136 (720)
Q Consensus 63 r~~~e~~~L~~l----~HpnIV~l~~~~~~~~~~~~~~~lv~E~--~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~y 136 (720)
+..+|..++.++ +||||+++++ ++.... .++++||+ .+++|.+++.... .+++..++.++.||+.||.|
T Consensus 80 ~~~~e~~~l~~l~~~~~h~~i~~~~~-~~~~~~---~~~~v~e~~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~ 154 (312)
T 2iwi_A 80 TCPLEVALLWKVGAGGGHPGVIRLLD-WFETQE---GFMLVLERPLPAQDLFDYITEKG-PLGEGPSRCFFGQVVAAIQH 154 (312)
T ss_dssp CCCHHHHHHHHHHSSCCCSSBCCEEE-EC--------CEEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcccCCCCCeeeEEE-EEecCC---eEEEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHH
Confidence 444677777777 8999999999 554443 46889997 6899999995543 49999999999999999999
Q ss_pred HHHCCceeccCCCCcEEEc-cCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccC
Q 004989 137 AHSQGIVVHNVRPSCFVMS-SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 215 (720)
Q Consensus 137 LHs~gIvHrDLKP~NILl~-~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~ 215 (720)
||++||+||||||+||+++ .++.++|+|||.+.......
T Consensus 155 lH~~~i~H~dlkp~Nil~~~~~~~~kl~dfg~~~~~~~~~---------------------------------------- 194 (312)
T 2iwi_A 155 CHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEP---------------------------------------- 194 (312)
T ss_dssp HHHHTEECCCCSGGGEEEETTTTEEEECCCSSCEECCSSC----------------------------------------
T ss_pred HHHCCeeecCCChhhEEEeCCCCeEEEEEcchhhhcccCc----------------------------------------
Confidence 9999999999999999999 88999999998874321110
Q ss_pred CCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCC-Cccccc
Q 004989 216 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDI 294 (720)
Q Consensus 216 ~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~-s~~sDI 294 (720)
.....||+.|+|||++.+..+ +.++||
T Consensus 195 ----------------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~Di 222 (312)
T 2iwi_A 195 ----------------------------------------------------YTDFDGTRVYSPPEWISRHQYHALPATV 222 (312)
T ss_dssp ----------------------------------------------------BCCCCSCTTTSCHHHHHHSCBCHHHHHH
T ss_pred ----------------------------------------------------ccccCCcccccCceeeecCCCCCccchH
Confidence 001357999999999977665 569999
Q ss_pred hhhhchhhhccccCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004989 295 YRLGVLLFELFCPFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 295 wSLGvll~eLltpf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
|||||++|||+++..++......... ...++. ...+...+||.+||+.||.+|||+.|+++||||+....
T Consensus 223 ~slG~il~~l~~g~~pf~~~~~~~~~--~~~~~~---~~~~~~~~li~~~l~~~p~~Rps~~e~l~~~~~~~~~~ 292 (312)
T 2iwi_A 223 WSLGILLYDMVCGDIPFERDQEILEA--ELHFPA---HVSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQTPAE 292 (312)
T ss_dssp HHHHHHHHHHHHSSCSCCSHHHHHHT--CCCCCT---TSCHHHHHHHHHHTCSSTTTSCCHHHHHHSTTTCC---
T ss_pred HHHHHHHHHHHHCCCCCCChHHHhhh--ccCCcc---cCCHHHHHHHHHHccCChhhCcCHHHHhcChhhcCchh
Confidence 99999999999943333222222111 111221 12344569999999999999999999999999998754
No 234
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=99.96 E-value=2.4e-30 Score=272.00 Aligned_cols=211 Identities=18% Similarity=0.160 Sum_probs=156.1
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..+|..++..+.|++++..+..+.... ...+++|||.+++|.+++......+++.+++.++.||+.||.|||++||+
T Consensus 51 ~~~e~~~l~~l~~~~~i~~~~~~~~~~---~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iv 127 (296)
T 3uzp_A 51 LHIESKIYKMMQGGVGIPTIRWCGAEG---DYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFI 127 (296)
T ss_dssp HHHHHHHHHHHTTSTTCCCEEEEEEET---TEEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHHHhhcCCCCCccccccCCC---CceEEEEEecCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 346777899999999888887344433 26799999999999999965556699999999999999999999999999
Q ss_pred eccCCCCcEEEc---cCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 144 VHNVRPSCFVMS---SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 144 HrDLKP~NILl~---~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||||||+|||++ .++.+||+|||.+........... .
T Consensus 128 H~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~------------------------------~---------- 167 (296)
T 3uzp_A 128 HRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQH------------------------------I---------- 167 (296)
T ss_dssp CSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCB------------------------------C----------
T ss_pred eCCCCHHHeEEecCCCCCeEEEeeCCCcccccccccccc------------------------------c----------
Confidence 999999999994 888999999998854322100000 0
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhch
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
. ........||+.|+|||++.+..++.++|||||||+
T Consensus 168 ------------------------------------------~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~i 204 (296)
T 3uzp_A 168 ------------------------------------------P-YRENKNLTGTARYASINTHLGIEQSRRDDLESLGYV 204 (296)
T ss_dssp ------------------------------------------C-CCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHH
T ss_pred ------------------------------------------c-cccccccccccccCChhhhcCCCCCcchhhHHHHHH
Confidence 0 000112478999999999999989999999999999
Q ss_pred hhhccc---cCCCCch--HHHHHHHhhc---CCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 301 LFELFC---PFSTGEE--KTRTMSSLRH---RVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 301 l~eLlt---pf~~~~~--~~~~~~~l~~---~~~p~~~~~~~p-~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
+|||++ ||..... ....+..+.. ....+.+...+| ...+|+.+||+.||.+|||+.++++
T Consensus 205 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~ 273 (296)
T 3uzp_A 205 LMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQ 273 (296)
T ss_dssp HHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHH
T ss_pred HHHHHhCCCCCCCcCchhhhhhhhhhcccccCCchHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHH
Confidence 999999 6654211 0011111111 111122223344 4459999999999999999999985
No 235
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=99.96 E-value=1.4e-30 Score=301.20 Aligned_cols=213 Identities=15% Similarity=0.137 Sum_probs=157.5
Q ss_pred hchhhhhhcccCCCCCceecccceeec---CCCCCcEEEEEec-CCCCHHHHHhCCC--CCCCHHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCEN---EAAIDPFVHAIEW-GDVSLRQWLDKPK--RSVDVYECLHIFRQIVEIVYA 136 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~---~~~~~~~~lv~E~-~ggsL~~~L~~~~--~~l~~~~~~~i~~QIl~aL~y 136 (720)
+..+|..+|.+++||||+++++ ++.. .......|+|||| .|++|.+++.... ..+++..++.++.||+.||.|
T Consensus 58 ~~~~Ei~iL~~L~HpnIV~l~~-v~~~~~~~~~~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~y 136 (676)
T 3qa8_A 58 RWCLEIQIMKKLNHPNVVSARE-VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRY 136 (676)
T ss_dssp HHHHHHHHHHHCCBTTBCCEEE-CCTTTCCCCTTSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCCceee-eecccccccCCCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHH
Confidence 4457888999999999999999 4332 1123457999999 7999999996533 358999999999999999999
Q ss_pred HHHCCceeccCCCCcEEEccCCc---eEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccc
Q 004989 137 AHSQGIVVHNVRPSCFVMSSFNH---VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLV 213 (720)
Q Consensus 137 LHs~gIvHrDLKP~NILl~~~~~---vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla 213 (720)
||++||+||||||+||+++.++. ++|+|||.+...+...
T Consensus 137 LHs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~~~~~~-------------------------------------- 178 (676)
T 3qa8_A 137 LHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE-------------------------------------- 178 (676)
T ss_dssp HHHTTBCCCCCCSTTEEEECCSSSCEEEECSCCCCCBTTSCC--------------------------------------
T ss_pred HHHCCCccCCCCHHHeEeecCCCceeEEEccccccccccccc--------------------------------------
Confidence 99999999999999999997665 8998888874321110
Q ss_pred cCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCcccc
Q 004989 214 TAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASD 293 (720)
Q Consensus 214 ~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sD 293 (720)
......||+.|+|||++.+..++.++|
T Consensus 179 -----------------------------------------------------~~~~~~gt~~Y~APE~l~~~~~s~ksD 205 (676)
T 3qa8_A 179 -----------------------------------------------------LCTEFVGTLQYLAPELLEQKKYTVTVD 205 (676)
T ss_dssp -----------------------------------------------------CCCCCCSCCTTCSSCSSCCSCCSTTHH
T ss_pred -----------------------------------------------------ccccccCCcccCChHHhccCCCCchhH
Confidence 001146899999999999888999999
Q ss_pred chhhhchhhhccc---cCCCCchHHHHHHHhh---------c----C--------CCCccccccCch-HHHHHHHcCCCC
Q 004989 294 IYRLGVLLFELFC---PFSTGEEKTRTMSSLR---------H----R--------VLPPQLLLKFPK-EASFCLWLLHPE 348 (720)
Q Consensus 294 IwSLGvll~eLlt---pf~~~~~~~~~~~~l~---------~----~--------~~p~~~~~~~p~-~~~Li~~~L~~d 348 (720)
||||||++|+|++ ||.+..........+. . + ..|..+...++. ..+||.+||.+|
T Consensus 206 IwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~D 285 (676)
T 3qa8_A 206 YWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWH 285 (676)
T ss_dssp HHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSS
T ss_pred HHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCC
Confidence 9999999999999 6655322211100000 0 0 001112222333 349999999999
Q ss_pred CCCCCChHHHHcCcccCCC
Q 004989 349 PSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 349 P~~Rpta~eiL~hp~~~~~ 367 (720)
|.+|||+.++++||||...
T Consensus 286 P~kRPTa~elL~hp~F~~l 304 (676)
T 3qa8_A 286 QRQRGTDPQNPNVGCFQAL 304 (676)
T ss_dssp CC---CCTTCCCCTTHHHH
T ss_pred HhhCcCHHHHhcCHHHHHH
Confidence 9999999999999999875
No 236
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=99.96 E-value=2e-30 Score=277.50 Aligned_cols=209 Identities=18% Similarity=0.139 Sum_probs=155.4
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++||||+++++ ++.... ...+++|||| .+++|.+++......+++.+++.++.||+.||.|||++|
T Consensus 88 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ 165 (326)
T 2w1i_A 88 DFEREIEILKSLQHDNIVKYKG-VCYSAG-RRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR 165 (326)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEE-EECC-----CCEEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCeeeEEE-EEEecC-CCceEEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 4457888999999999999999 443322 2257999999 789999999766556999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.+||+|||.+......... .
T Consensus 166 ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~~~~~--------------------------------~----------- 202 (326)
T 2w1i_A 166 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEY--------------------------------Y----------- 202 (326)
T ss_dssp EECSCCCGGGEEEEETTEEEECCCTTCEECCSSCSE--------------------------------E-----------
T ss_pred EeccCCCcceEEEcCCCcEEEecCcchhhccccccc--------------------------------c-----------
Confidence 999999999999999999999999987443211000 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
. ......++..|+|||++.+..++.++|||||||++
T Consensus 203 ------------------------~--------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 238 (326)
T 2w1i_A 203 ------------------------K--------------------VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVL 238 (326)
T ss_dssp ------------------------E--------------------CSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHH
T ss_pred ------------------------c--------------------cccCCCCceeEECchhhcCCCCCchhhHHHHHHHH
Confidence 0 00013567889999999988899999999999999
Q ss_pred hhccccCCCCchH------------------HHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFCPFSTGEEK------------------TRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLltpf~~~~~~------------------~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||+++..+.... ......+.....++......+...+||.+||..||.+|||+.|+++
T Consensus 239 ~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~ 315 (326)
T 2w1i_A 239 YELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL 315 (326)
T ss_dssp HHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 9999932221111 0111222222222222223344559999999999999999999985
No 237
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=99.96 E-value=2.7e-30 Score=274.76 Aligned_cols=218 Identities=12% Similarity=0.110 Sum_probs=156.9
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~---~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
+..+|..++..++||||+++++.+.........+|+|||| .+++|.+++.. ....+++.+++.++.||+.||.|||
T Consensus 72 ~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH 151 (317)
T 2buj_A 72 EAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIH 151 (317)
T ss_dssp HHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 3447888999999999999999444333334468999999 88899999943 4556999999999999999999999
Q ss_pred HCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCC
Q 004989 139 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
++||+||||||+|||++.++.++|+|||.+......... .
T Consensus 152 ~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~--------------------------------~-------- 191 (317)
T 2buj_A 152 AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEG--------------------------------S-------- 191 (317)
T ss_dssp HTTEECCCCCGGGEEECTTSCEEECCCSSCEESCEEEES--------------------------------H--------
T ss_pred hCCcccCCCCHHHEEEcCCCCEEEEecCcchhccccccc--------------------------------c--------
Confidence 999999999999999999999999999987432110000 0
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC---CCccccch
Q 004989 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP---VSCASDIY 295 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~---~s~~sDIw 295 (720)
...... .......||+.|+|||++.+.. ++.++|||
T Consensus 192 -----------------------~~~~~~------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~ 230 (317)
T 2buj_A 192 -----------------------RQALTL------------------QDWAAQRCTISYRAPELFSVQSHCVIDERTDVW 230 (317)
T ss_dssp -----------------------HHHHHH------------------HHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHH
T ss_pred -----------------------cccccc------------------cccccccCCcccCCHhHhccCCCcCCCchhhHH
Confidence 000000 0001136799999999997665 68999999
Q ss_pred hhhchhhhccccCCCCchHH----HHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004989 296 RLGVLLFELFCPFSTGEEKT----RTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 296 SLGvll~eLltpf~~~~~~~----~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~h 361 (720)
||||++|||+++..++.... .....+......+......+...+||.+||..||.+|||+.+++++
T Consensus 231 slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 300 (317)
T 2buj_A 231 SLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQ 300 (317)
T ss_dssp HHHHHHHHHHHSSCTTHHHHHTTSCHHHHHHCC--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHHHhCCCChhhhhcccchhhHHhhccCCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHH
Confidence 99999999999433322110 1111222222222222233455699999999999999999999974
No 238
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=99.96 E-value=1.2e-30 Score=282.53 Aligned_cols=212 Identities=11% Similarity=0.048 Sum_probs=153.9
Q ss_pred chhhhhhcccCCCCCceecccc--------------eeecCCCCCcEEEEEecCCCCHHHHHhCC-CCCCCHHHHHHHHH
Q 004989 64 KHSDGVELTHGDHLRNQGGLSG--------------VCENEAAIDPFVHAIEWGDVSLRQWLDKP-KRSVDVYECLHIFR 128 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~--------------~~~~~~~~~~~~lv~E~~ggsL~~~L~~~-~~~l~~~~~~~i~~ 128 (720)
..+|..++.+++|||||++++. ++.. ....+|+||||.+++|.+++... ...+++.+++.|+.
T Consensus 89 ~~~E~~~l~~l~h~niv~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~ 166 (352)
T 2jii_A 89 LFNEQNFFQRAAKPLQVNKWKKLYSTPLLAIPTCMGFGVH--QDKYRFLVLPSLGRSLQSALDVSPKHVLSERSVLQVAC 166 (352)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHTTCTTCSCCCCCEEEEE--TTTEEEEEEECCCEEHHHHHHHSGGGCCCHHHHHHHHH
T ss_pred HHHHHHHHHHhcccchhhhhhhhccCCccCccchhhcccc--CCcEEEEEecCCCcCHHHHHHhCCcCCCCHHHHHHHHH
Confidence 3477789999999999985431 2222 12368999999999999999543 35599999999999
Q ss_pred HHHHHHHHHHHCCceeccCCCCcEEEccCC--ceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhccc
Q 004989 129 QIVEIVYAAHSQGIVVHNVRPSCFVMSSFN--HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLR 206 (720)
Q Consensus 129 QIl~aL~yLHs~gIvHrDLKP~NILl~~~~--~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 206 (720)
||+.||.|||++||+||||||+|||++.++ .+||+|||++.........
T Consensus 167 qi~~~L~~LH~~~ivH~Dikp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~----------------------------- 217 (352)
T 2jii_A 167 RLLDALEFLHENEYVHGNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKH----------------------------- 217 (352)
T ss_dssp HHHHHHHHHHHTTCBCSCCCGGGEEEETTEEEEEEECCGGGCBCSSGGGCC-----------------------------
T ss_pred HHHHHHHHHHhCCccCCCCCHHHEEEcCCCCceEEEecCcceeeccCCCcc-----------------------------
Confidence 999999999999999999999999999888 8999999988543211000
Q ss_pred ccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCC
Q 004989 207 REDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA 286 (720)
Q Consensus 207 l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 286 (720)
..+ .........||+.|+|||++.+.
T Consensus 218 -~~~-----------------------------------------------------~~~~~~~~~gt~~y~aPE~~~~~ 243 (352)
T 2jii_A 218 -VAY-----------------------------------------------------VEGSRSPHEGDLEFISMDLHKGC 243 (352)
T ss_dssp -CCC-----------------------------------------------------CTTSSCTTCSCTTTCCHHHHTTC
T ss_pred -ccc-----------------------------------------------------cccccccccCCccccCHHHHccC
Confidence 000 00000124789999999999998
Q ss_pred CCCccccchhhhchhhhccc---cCCCCc-hHHHHHHHhhc-CCCCcccc------cc-CchHHHHHHHcCCCCCCCCCC
Q 004989 287 PVSCASDIYRLGVLLFELFC---PFSTGE-EKTRTMSSLRH-RVLPPQLL------LK-FPKEASFCLWLLHPEPSGRPK 354 (720)
Q Consensus 287 ~~s~~sDIwSLGvll~eLlt---pf~~~~-~~~~~~~~l~~-~~~p~~~~------~~-~p~~~~Li~~~L~~dP~~Rpt 354 (720)
.++.++|||||||++|||++ ||.... ........... ...++.+. .. .+...+|+.+||..||.+|||
T Consensus 244 ~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps 323 (352)
T 2jii_A 244 GPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNTEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPP 323 (352)
T ss_dssp CCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCC
T ss_pred CCCchhhHHHHHHHHHHHHhCCCCcccCCcCHHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCC
Confidence 89999999999999999999 665432 11112211110 00111111 12 344569999999999999999
Q ss_pred hHHHHc
Q 004989 355 MGELLQ 360 (720)
Q Consensus 355 a~eiL~ 360 (720)
+.++++
T Consensus 324 ~~~l~~ 329 (352)
T 2jii_A 324 YAMLRN 329 (352)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999986
No 239
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=99.96 E-value=1.8e-30 Score=277.60 Aligned_cols=217 Identities=18% Similarity=0.240 Sum_probs=140.2
Q ss_pred hchhhhhhcccCC-CCCceecccceeec----CCCCCcEEEEEecCCCCHHHHHhC--CCCCCCHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGD-HLRNQGGLSGVCEN----EAAIDPFVHAIEWGDVSLRQWLDK--PKRSVDVYECLHIFRQIVEIVY 135 (720)
Q Consensus 63 r~~~e~~~L~~l~-HpnIV~l~~~~~~~----~~~~~~~~lv~E~~ggsL~~~L~~--~~~~l~~~~~~~i~~QIl~aL~ 135 (720)
+..+|..++.++. ||||+++++.+... ......++++|||.+++|.+++.. ....+++.+++.++.||+.||.
T Consensus 71 ~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~ 150 (337)
T 3ll6_A 71 AIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQ 150 (337)
T ss_dssp HHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEEEEEEEECCSEEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCChhhccccccccccccccCCceEEEEEEecCCCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHH
Confidence 3347777888885 99999999944321 122335899999977899999843 3445999999999999999999
Q ss_pred HHHHCC--ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccc
Q 004989 136 AAHSQG--IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLV 213 (720)
Q Consensus 136 yLHs~g--IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla 213 (720)
|||++| |+||||||+|||++.++.+||+|||++...+..... .+ .
T Consensus 151 ~LH~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~-------------------------------~~--~ 197 (337)
T 3ll6_A 151 HMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDY-------------------------------SW--S 197 (337)
T ss_dssp HHHTSSSCCBCCCCCGGGCEECTTSCEEBCCCTTCBCCSSCC--------------------------------------
T ss_pred HHHhCCCCEEEccCCcccEEECCCCCEEEecCccceeccccCcc-------------------------------cc--c
Confidence 999999 999999999999999999999999998654322100 00 0
Q ss_pred cCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccc---cCCCCCc
Q 004989 214 TAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEEL---AGAPVSC 290 (720)
Q Consensus 214 ~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l---~~~~~s~ 290 (720)
. .............||+.|+|||++ .+..++.
T Consensus 198 ~---------------------------------------------~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~ 232 (337)
T 3ll6_A 198 A---------------------------------------------QRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGE 232 (337)
T ss_dssp -----------------------------------------------------------------------CCTTSCSSH
T ss_pred c---------------------------------------------cccccchhhccccCCCCcCChhhhhccccCCCCh
Confidence 0 000000001124689999999998 4556899
Q ss_pred cccchhhhchhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004989 291 ASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 291 ~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~h 361 (720)
++|||||||++|||++ ||...... ..+......+......+...+||.+||++||.+|||+.|++++
T Consensus 233 ~~Dv~slG~il~el~~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 302 (337)
T 3ll6_A 233 KQDIWALGCILYLLCFRQHPFEDGAKL----RIVNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQ 302 (337)
T ss_dssp HHHHHHHHHHHHHHHHSSCCC----------------CCCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred HHhHHHHHHHHHHHHhCCCCCcchhHH----HhhcCcccCCcccccchHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 9999999999999999 55433221 1111111112222233455699999999999999999999974
No 240
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=99.96 E-value=3.9e-30 Score=300.90 Aligned_cols=203 Identities=18% Similarity=0.167 Sum_probs=158.6
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++|||||++++ ++.++ .+|+|||| .+++|.+++......+++..++.++.||+.||.|||++|
T Consensus 437 ~~~~E~~~l~~l~HpnIv~l~~-~~~~~----~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~g 511 (656)
T 2j0j_A 437 KFLQEALTMRQFDHPHIVKLIG-VITEN----PVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKR 511 (656)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EECSS----SCEEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCCCeEEE-EEecC----ceEEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3447888999999999999999 55332 46999999 889999999766556999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||++.........
T Consensus 512 ivHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~~~-------------------------------------------- 547 (656)
T 2j0j_A 512 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY-------------------------------------------- 547 (656)
T ss_dssp CCCSCCSGGGEEEEETTEEEECCCCCCCSCCC------------------------------------------------
T ss_pred ccccccchHhEEEeCCCCEEEEecCCCeecCCCcce--------------------------------------------
Confidence 999999999999999999999999988443111000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......+|+.|+|||++.+..++.++|||||||++
T Consensus 548 ---------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il 582 (656)
T 2j0j_A 548 ---------------------------------------------KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCM 582 (656)
T ss_dssp ---------------------------------------------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred ---------------------------------------------eccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHH
Confidence 00013568899999999888899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||...... .....+.....++......+...+||.+||+.||.+|||+.++++
T Consensus 583 ~ellt~g~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~ 644 (656)
T 2j0j_A 583 WEILMHGVKPFQGVKNN-DVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKA 644 (656)
T ss_dssp HHHHTTSCCTTTTCCHH-HHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHcCCCCCCCCCHH-HHHHHHHcCCCCCCCccccHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 99996 66655443 344444444333322233345569999999999999999999985
No 241
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=99.96 E-value=1.3e-30 Score=279.97 Aligned_cols=207 Identities=12% Similarity=0.121 Sum_probs=151.2
Q ss_pred hhhhhccc--CCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH----
Q 004989 66 SDGVELTH--GDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAH---- 138 (720)
Q Consensus 66 ~e~~~L~~--l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLH---- 138 (720)
+|..++.. ++||||+++++.+.........+|++||| .+++|.+++.+. .+++.+++.++.||+.||.|||
T Consensus 83 ~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~ 160 (342)
T 1b6c_B 83 REAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIV 160 (342)
T ss_dssp HHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBC
T ss_pred HHHHHHHHhhcCCCcEEEEEeeecccCCccceeEEEEeecCCCcHHHHHhcc--CccHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34444444 89999999999444444333468999999 888999999653 4899999999999999999999
Q ss_pred ----HCCceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhccccccccccc
Q 004989 139 ----SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVT 214 (720)
Q Consensus 139 ----s~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~ 214 (720)
++||+||||||+|||++.++.+||+|||++......... .
T Consensus 161 ~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~--------------------------------~---- 204 (342)
T 1b6c_B 161 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDT--------------------------------I---- 204 (342)
T ss_dssp STTCBCEEECSCCSGGGEEECTTSCEEECCCTTCEEEETTTTE--------------------------------E----
T ss_pred hhcccCCeeeCCCCHHHEEECCCCCEEEEECCCceeccccccc--------------------------------c----
Confidence 899999999999999999999999999987432111000 0
Q ss_pred CCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCC------C
Q 004989 215 APTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP------V 288 (720)
Q Consensus 215 ~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~------~ 288 (720)
. .......||+.|+|||++.+.. +
T Consensus 205 -------------------------------~-------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 234 (342)
T 1b6c_B 205 -------------------------------D-------------------IAPNHRVGTKRYMAPEVLDDSINMKHFES 234 (342)
T ss_dssp -------------------------------E-------------------ECCCSCCCCGGGCCHHHHTSCCCTTCHHH
T ss_pred -------------------------------c-------------------cccccCCcCcccCCHhhhccccccccccc
Confidence 0 0001146899999999998763 3
Q ss_pred Cccccchhhhchhhhcccc-------------CCCC----chHHHHHHHhhcCCCCccccccC------chHHHHHHHcC
Q 004989 289 SCASDIYRLGVLLFELFCP-------------FSTG----EEKTRTMSSLRHRVLPPQLLLKF------PKEASFCLWLL 345 (720)
Q Consensus 289 s~~sDIwSLGvll~eLltp-------------f~~~----~~~~~~~~~l~~~~~p~~~~~~~------p~~~~Li~~~L 345 (720)
+.++|||||||++|||+++ |... .........+......+.+...+ +...+|+.+||
T Consensus 235 ~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 314 (342)
T 1b6c_B 235 FKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECW 314 (342)
T ss_dssp HHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHC
T ss_pred CCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCcccHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHh
Confidence 4789999999999999973 3221 11223333343333333333222 23459999999
Q ss_pred CCCCCCCCChHHHHc
Q 004989 346 HPEPSGRPKMGELLQ 360 (720)
Q Consensus 346 ~~dP~~Rpta~eiL~ 360 (720)
+.||.+|||+.++++
T Consensus 315 ~~dp~~Rps~~~i~~ 329 (342)
T 1b6c_B 315 YANGAARLTALRIKK 329 (342)
T ss_dssp CSSGGGSCCHHHHHH
T ss_pred ccChhhCCCHHHHHH
Confidence 999999999999986
No 242
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=99.96 E-value=1.4e-30 Score=286.94 Aligned_cols=204 Identities=15% Similarity=0.174 Sum_probs=152.4
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC--CCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP--KRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~--~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
..+|..+|.+++||||+++++ ++.... ...+|+|||| .|++|.+++... ...+++.+++.++.||+.||.|||++
T Consensus 54 ~~~E~~~l~~l~hpnIv~~~~-~~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~ 131 (396)
T 4eut_A 54 QMREFEVLKKLNHKNIVKLFA-IEEETT-TRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN 131 (396)
T ss_dssp HHHHHHHHHHCCCTTBCCEEE-EEECTT-TCCEEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhcCCCCCCeEEE-eeccCC-CCeeEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 347888999999999999999 544432 3367999999 789999999543 22389999999999999999999999
Q ss_pred CceeccCCCCcEEE----ccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCC
Q 004989 141 GIVVHNVRPSCFVM----SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 216 (720)
Q Consensus 141 gIvHrDLKP~NILl----~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~ 216 (720)
||+||||||+|||+ +..+.+||+|||.+.......
T Consensus 132 ~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~~~----------------------------------------- 170 (396)
T 4eut_A 132 GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE----------------------------------------- 170 (396)
T ss_dssp TEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCCGG-----------------------------------------
T ss_pred CEEECCcCHHHEEEeecCCCceeEEEecCCCceEccCCC-----------------------------------------
Confidence 99999999999999 677779998888874321110
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccC--------CCC
Q 004989 217 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG--------APV 288 (720)
Q Consensus 217 ~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~--------~~~ 288 (720)
......||+.|+|||++.+ ..+
T Consensus 171 --------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~ 200 (396)
T 4eut_A 171 --------------------------------------------------QFVSLYGTEEYLHPDMYERAVLRKDHQKKY 200 (396)
T ss_dssp --------------------------------------------------GSSCSSSCCTTCCHHHHHHHCC--CHHHHH
T ss_pred --------------------------------------------------ccccccCCccccCHHHhhccccccccccCC
Confidence 0011468999999999865 447
Q ss_pred Cccccchhhhchhhhccc---cCCCC---chHHHHHHHhhcCCCCcc-----------------------ccccCc-hHH
Q 004989 289 SCASDIYRLGVLLFELFC---PFSTG---EEKTRTMSSLRHRVLPPQ-----------------------LLLKFP-KEA 338 (720)
Q Consensus 289 s~~sDIwSLGvll~eLlt---pf~~~---~~~~~~~~~l~~~~~p~~-----------------------~~~~~p-~~~ 338 (720)
+.++|||||||++|||++ ||.+. ......+..+..+..+.. +....+ ...
T Consensus 201 ~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~ 280 (396)
T 4eut_A 201 GATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLT 280 (396)
T ss_dssp HHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCCcccchhheeccCCCcccCccCCcccccchHHHhhch
Confidence 889999999999999999 66432 222334444433322211 001112 234
Q ss_pred HHHHHcCCCCCCCCCChHHHHc
Q 004989 339 SFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 339 ~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
+|+.+||.+||++||++.++++
T Consensus 281 ~ll~~~L~~dP~~R~s~~e~l~ 302 (396)
T 4eut_A 281 PVLANILEADQEKCWGFDQFFA 302 (396)
T ss_dssp HHHHHHSCCCTTTSCCHHHHHH
T ss_pred HHHHHhhccChhhhccHHHHHH
Confidence 8999999999999999999865
No 243
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=99.96 E-value=2.8e-30 Score=295.61 Aligned_cols=207 Identities=14% Similarity=0.158 Sum_probs=159.9
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
..+|+.+|.+++|||||++++ ++... .+|+|||| .+++|.++|.. .+..+++.+++.|+.||+.||.|||++|
T Consensus 309 ~~~E~~~l~~l~hpniv~~~~-~~~~~----~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ 383 (535)
T 2h8h_A 309 FLQEAQVMKKLRHEKLVQLYA-VVSEE----PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN 383 (535)
T ss_dssp HHHHHHHHHHCCCTTBCCEEE-EECSS----SCEEEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhCCCCCEeeEEE-EEeec----cceEeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 347888999999999999999 55442 47999999 88999999943 2345899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
||||||||+|||++.++.+||+|||+++...... +
T Consensus 384 ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~----------------------------------~----------- 418 (535)
T 2h8h_A 384 YVHRDLRAANILVGENLVCKVADFGLARLIEDNE----------------------------------Y----------- 418 (535)
T ss_dssp CCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHH----------------------------------H-----------
T ss_pred eeCCCCCHhhEEEcCCCcEEEcccccceecCCCc----------------------------------e-----------
Confidence 9999999999999999999999999884321100 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
. ......++..|+|||++.+..++.++|||||||+|
T Consensus 419 -------------------------~-------------------~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l 454 (535)
T 2h8h_A 419 -------------------------T-------------------ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILL 454 (535)
T ss_dssp -------------------------H-------------------TTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred -------------------------e-------------------cccCCcCcccccCHHHhccCCCCchhhHHHHHHHH
Confidence 0 00002457889999999888899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCch-HHHHHHHcCCCCCCCCCChHHHHc--CcccCC
Q 004989 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQ--SEFLNE 366 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~-~~~Li~~~L~~dP~~Rpta~eiL~--hp~~~~ 366 (720)
|||++ ||...... .....+..+...+. ...++. ..+||.+||+.||++|||+.+|++ ..++..
T Consensus 455 ~el~t~g~~P~~~~~~~-~~~~~i~~~~~~~~-~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~ 524 (535)
T 2h8h_A 455 TELTTKGRVPYPGMVNR-EVLDQVERGYRMPC-PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 524 (535)
T ss_dssp HHHTTTTCCSSTTCCHH-HHHHHHHTTCCCCC-CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCC
T ss_pred HHHHhCCCCCCCCCCHH-HHHHHHHcCCCCCC-CCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhc
Confidence 99998 66655443 34444444433222 233444 559999999999999999999986 244443
No 244
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.96 E-value=4.1e-31 Score=292.85 Aligned_cols=175 Identities=13% Similarity=0.141 Sum_probs=135.2
Q ss_pred CCcEEEEEecCCCCHHHHHh------CCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCCceEEeecC
Q 004989 93 IDPFVHAIEWGDVSLRQWLD------KPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESA 166 (720)
Q Consensus 93 ~~~~~lv~E~~ggsL~~~L~------~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg 166 (720)
...++++|++.+++|.++++ .....+++..++.++.||+.||.|||++|||||||||+|||++.++.+||+|||
T Consensus 177 ~~~~~~~~~~~~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiHrDiKp~NILl~~~~~~kL~DFG 256 (413)
T 3dzo_A 177 VLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFE 256 (413)
T ss_dssp CCSEEEEEECCSEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCGG
T ss_pred ccceEEEeehhcCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcccceEEEecCCeEEEEecc
Confidence 44578999998899999983 234457888999999999999999999999999999999999999999999888
Q ss_pred cccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCCCcccccccccccccccc
Q 004989 167 SCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHK 246 (720)
Q Consensus 167 ~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~ 246 (720)
+++..+..
T Consensus 257 ~a~~~~~~------------------------------------------------------------------------ 264 (413)
T 3dzo_A 257 HLVRDGAS------------------------------------------------------------------------ 264 (413)
T ss_dssp GCEETTEE------------------------------------------------------------------------
T ss_pred ceeecCCc------------------------------------------------------------------------
Confidence 87322100
Q ss_pred ccccccchhhhhcccCCCCccccccccCCcccCcccc----------cCCCCCccccchhhhchhhhccc---cCCCCch
Q 004989 247 ILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEEL----------AGAPVSCASDIYRLGVLLFELFC---PFSTGEE 313 (720)
Q Consensus 247 ~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l----------~~~~~s~~sDIwSLGvll~eLlt---pf~~~~~ 313 (720)
....+| +.|+|||++ .+..++.++|||||||++|||++ ||.....
T Consensus 265 ---------------------~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~ 322 (413)
T 3dzo_A 265 ---------------------AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAA 322 (413)
T ss_dssp ---------------------ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCCCCTTGG
T ss_pred ---------------------cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCCCCCcch
Confidence 011467 999999999 55558999999999999999999 6655432
Q ss_pred HHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004989 314 KTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 314 ~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
.. ....+ ++. .....+...+||.+||++||.+|||+.++++||||+..
T Consensus 323 ~~-~~~~~----~~~-~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~~~~~~~~ 370 (413)
T 3dzo_A 323 LG-GSEWI----FRS-CKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQL 370 (413)
T ss_dssp GS-CSGGG----GSS-CCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred hh-hHHHH----Hhh-cccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHHHH
Confidence 21 11111 110 01122345599999999999999999999999999764
No 245
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=99.96 E-value=3e-30 Score=280.72 Aligned_cols=193 Identities=12% Similarity=0.071 Sum_probs=141.0
Q ss_pred hcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC----CCCCCCHHHHHHHHHHHHHHHHHHHHCCcee
Q 004989 70 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK----PKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 70 ~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~----~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|....|+||+++++ ++.... ..|+|||| .|++|.+++.. ....+++..++.|+.||+.||.|||++||||
T Consensus 120 ~l~~~~~~~iv~~~~-~~~~~~---~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivH 195 (365)
T 3e7e_A 120 RLKPSMQHMFMKFYS-AHLFQN---GSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIH 195 (365)
T ss_dssp HSCGGGGGGBCCEEE-EEECSS---CEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEEC
T ss_pred Hhhhhhhhhhhhhhe-eeecCC---CcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeec
Confidence 344445999999999 444443 57999999 89999999953 3456999999999999999999999999999
Q ss_pred ccCCCCcEEEcc-----------CCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccc
Q 004989 145 HNVRPSCFVMSS-----------FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLV 213 (720)
Q Consensus 145 rDLKP~NILl~~-----------~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla 213 (720)
|||||+|||++. ++.+||+|||++........
T Consensus 196 rDiKp~NIll~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~------------------------------------- 238 (365)
T 3e7e_A 196 GDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPK------------------------------------- 238 (365)
T ss_dssp CCCSGGGEEECGGGTCC------CTTEEECCCTTCEEGGGSCT-------------------------------------
T ss_pred CCCCHHHEEecccccCccccccccCCEEEeeCchhhhhhccCC-------------------------------------
Confidence 999999999998 89999999988743210000
Q ss_pred cCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCcccc
Q 004989 214 TAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASD 293 (720)
Q Consensus 214 ~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sD 293 (720)
.......+||+.|+|||++.+..++.++|
T Consensus 239 ---------------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~D 267 (365)
T 3e7e_A 239 ---------------------------------------------------GTIFTAKCETSGFQCVEMLSNKPWNYQID 267 (365)
T ss_dssp ---------------------------------------------------TEEECCSSCTTSCCCHHHHTTCCBSTHHH
T ss_pred ---------------------------------------------------CceeeeecCCCCCCChHHhcCCCCCcccc
Confidence 00001247899999999999999999999
Q ss_pred chhhhchhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004989 294 IYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 294 IwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
||||||++|||++ ||....... ..+ ...++.. ...+...+++..||..+|.+|++..+.+.
T Consensus 268 iwslG~il~elltg~~pf~~~~~~~---~~~-~~~~~~~--~~~~~~~~~~~~~l~~~p~~r~~~~~~l~ 331 (365)
T 3e7e_A 268 YFGVAATVYCMLFGTYMKVKNEGGE---CKP-EGLFRRL--PHLDMWNEFFHVMLNIPDCHHLPSLDLLR 331 (365)
T ss_dssp HHHHHHHHHHHHHSSCCCEEEETTE---EEE-CSCCTTC--SSHHHHHHHHHHHHCCCCTTCCCCHHHHH
T ss_pred HHHHHHHHHHHHhCCCccccCCCCc---eee-chhcccc--CcHHHHHHHHHHHcCCCCCCcchHHHHHH
Confidence 9999999999999 443221110 000 1111111 11123348999999999999965444443
No 246
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=99.96 E-value=1.9e-29 Score=266.55 Aligned_cols=190 Identities=16% Similarity=0.225 Sum_probs=139.8
Q ss_pred hhhhhc-ccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 66 SDGVEL-THGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 66 ~e~~~L-~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
+|..++ ..++||||+++++.+.........+|+|||| .|++|.+++... ...+++.+++.++.||+.||.|||++||
T Consensus 59 ~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i 138 (299)
T 3m2w_A 59 REVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 138 (299)
T ss_dssp HHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 455555 5579999999999443322223368999999 788999999543 3469999999999999999999999999
Q ss_pred eeccCCCCcEEEcc---CCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCC
Q 004989 143 VVHNVRPSCFVMSS---FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 143 vHrDLKP~NILl~~---~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||||||+|||++. ++.++|+|||++...
T Consensus 139 ~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~------------------------------------------------ 170 (299)
T 3m2w_A 139 AHRDVKPENLLYTSKRPNAILKLTDFGFAKET------------------------------------------------ 170 (299)
T ss_dssp ECCCCSGGGEEESSSSTTCCEEECCCTTCEEC------------------------------------------------
T ss_pred ccCCCCHHHEEEecCCCCCcEEEecccccccc------------------------------------------------
Confidence 99999999999997 788999888766110
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhc
Q 004989 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
.+..++.++|||||||
T Consensus 171 ----------------------------------------------------------------~~~~~~~~~DiwslG~ 186 (299)
T 3m2w_A 171 ----------------------------------------------------------------TGEKYDKSCDMWSLGV 186 (299)
T ss_dssp ----------------------------------------------------------------TTCGGGGHHHHHHHHH
T ss_pred ----------------------------------------------------------------ccccCCchhhHHHHHH
Confidence 0123678999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcC------CCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004989 300 LLFELFC---PFSTGEEKTRTMSSLRHR------VLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~~------~~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
++|||++ ||....... ....+... .++......+ +...+||.+||+.||.+|||+.|+|+||||....
T Consensus 187 il~el~tg~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~hp~~~~~~ 264 (299)
T 3m2w_A 187 IMYILLCGYPPFYSNHGLA-ISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST 264 (299)
T ss_dssp HHHHHHHSSCSCCC--------CCSCCSSCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTGG
T ss_pred HHHHHHHCCCCCCCCcchh-hhHHHHHHHhhccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcChhhcccc
Confidence 9999999 564432221 11111111 1121111233 4455999999999999999999999999998763
No 247
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.95 E-value=1.2e-29 Score=298.68 Aligned_cols=198 Identities=18% Similarity=0.209 Sum_probs=148.6
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCC-cEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAID-PFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~-~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+..+|..+|.+++|||||++++.+........ .+|+|||| .|++|.+++.. .+++.+++.|+.||+.||.|||++
T Consensus 125 ~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~~lv~E~~~g~~L~~~~~~---~l~~~~~~~~~~qi~~aL~~lH~~ 201 (681)
T 2pzi_A 125 MAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQ---KLPVAEAIAYLLEILPALSYLHSI 201 (681)
T ss_dssp HHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEEEEEEECCCCEECC----C---CCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCceeEEEEEeCCCCcHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHC
Confidence 44578889999999999999994443332222 26999999 89999998744 499999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCC
Q 004989 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
|||||||||+|||++.+ .+||+|||+++..+..
T Consensus 202 giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~~---------------------------------------------- 234 (681)
T 2pzi_A 202 GLVYNDLKPENIMLTEE-QLKLIDLGAVSRINSF---------------------------------------------- 234 (681)
T ss_dssp TEECCCCSGGGEEECSS-CEEECCCTTCEETTCC----------------------------------------------
T ss_pred CCeecccChHHeEEeCC-cEEEEecccchhcccC----------------------------------------------
Confidence 99999999999999874 8999988887322100
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhch
Q 004989 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
....||+.|+|||++.+. ++.++|||||||+
T Consensus 235 ------------------------------------------------~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~ 265 (681)
T 2pzi_A 235 ------------------------------------------------GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRT 265 (681)
T ss_dssp ------------------------------------------------SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHH
T ss_pred ------------------------------------------------CccCCCccccCHHHHcCC-CCCceehhhhHHH
Confidence 014689999999999776 4899999999999
Q ss_pred hhhccccCCCCchHHHHHHHhhcCCCC-ccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccC
Q 004989 301 LFELFCPFSTGEEKTRTMSSLRHRVLP-PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLN 365 (720)
Q Consensus 301 l~eLltpf~~~~~~~~~~~~l~~~~~p-~~~~~~~p~~~~Li~~~L~~dP~~Rpta~eiL~hp~~~ 365 (720)
||+|++++.+.... ....... .......+...+||.+||++||.+||+..+.+.|+|+.
T Consensus 266 l~~l~~g~~~~~~~------~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~ 325 (681)
T 2pzi_A 266 LAALTLDLPTRNGR------YVDGLPEDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTG 325 (681)
T ss_dssp HHHHHSCCCEETTE------ECSSCCTTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred HHHHHhCCCCCccc------ccccccccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHH
Confidence 99999965443211 0111111 11112234556999999999999999988888877753
No 248
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.95 E-value=2.6e-29 Score=270.06 Aligned_cols=169 Identities=12% Similarity=0.093 Sum_probs=123.9
Q ss_pred CcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH-HCCceeccCCCCcEEEccCC-------------
Q 004989 94 DPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAH-SQGIVVHNVRPSCFVMSSFN------------- 158 (720)
Q Consensus 94 ~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLH-s~gIvHrDLKP~NILl~~~~------------- 158 (720)
..+|+|||| .+++|.+.+.+ ..+++.+++.|+.||+.||.||| ++|||||||||+|||++.++
T Consensus 135 ~~~~lv~E~~~~g~ll~~~~~--~~~~~~~~~~i~~qi~~aL~~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~ 212 (336)
T 2vuw_A 135 DQLFIVLEFEFGGIDLEQMRT--KLSSLATAKSILHQLTASLAVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSS 212 (336)
T ss_dssp TCEEEEEEEECCCEETGGGTT--TCCCHHHHHHHHHHHHHHHHHHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEE
T ss_pred CeEEEEEEecCCCccHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHhCCEeECCCCHHHEEEeccCCcceeeeccCccc
Confidence 478999999 78876666633 34899999999999999999999 99999999999999999877
Q ss_pred -------ceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCcccccccCCCc
Q 004989 159 -------HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSA 231 (720)
Q Consensus 159 -------~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~ 231 (720)
.+||+|||+++.. ..
T Consensus 213 ~~~~~~~~vkL~DFG~a~~~---------------------------------------------~~------------- 234 (336)
T 2vuw_A 213 TIPSCGLQVSIIDYTLSRLE---------------------------------------------RD------------- 234 (336)
T ss_dssp EEECTTEEEEECCCTTCBEE---------------------------------------------ET-------------
T ss_pred cccCCCceEEEeeccccEec---------------------------------------------CC-------------
Confidence 6777666655211 00
Q ss_pred cccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhch-hhhccccCCC
Q 004989 232 YGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL-LFELFCPFST 310 (720)
Q Consensus 232 ~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl-l~eLltpf~~ 310 (720)
...+||+.|+|||++.+.. +.++||||||++ .+++++++.+
T Consensus 235 -------------------------------------~~~~gt~~y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p 276 (336)
T 2vuw_A 235 -------------------------------------GIVVFCDVSMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHP 276 (336)
T ss_dssp -------------------------------------TEEECCCCTTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCT
T ss_pred -------------------------------------CcEEEeecccChhhhcCCC-ccceehhhhhCCCCcccccccCC
Confidence 0137899999999999876 899999998777 7778775555
Q ss_pred CchH---HHHHHHhh-cCC----CCccccccC-chHHHHHHHcCCCCCCCCCChHHHH-cCcccC
Q 004989 311 GEEK---TRTMSSLR-HRV----LPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELL-QSEFLN 365 (720)
Q Consensus 311 ~~~~---~~~~~~l~-~~~----~p~~~~~~~-p~~~~Li~~~L~~dP~~Rpta~eiL-~hp~~~ 365 (720)
.... ......+. ... .++.....+ +...+||.+||++| |+.|+| +||||+
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~d-----sa~e~l~~Hp~f~ 336 (336)
T 2vuw_A 277 YSNVLWLHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRTMLNFS-----SATDLLCQHSLFK 336 (336)
T ss_dssp HHHHHHHHHHHHHHHHTCCCSSCCCSHHHHHHHHHHHHHHHHGGGSS-----SHHHHHHHCGGGC
T ss_pred CcchhhhhHHHHhhhhhhccCcccchhhhhhcCHHHHHHHHHHhccC-----CHHHHHhcCCCcC
Confidence 4331 11222222 111 112222223 34459999999977 999999 999995
No 249
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=99.95 E-value=7.8e-29 Score=279.52 Aligned_cols=210 Identities=18% Similarity=0.180 Sum_probs=154.9
Q ss_pred hhhhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCcee
Q 004989 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 65 ~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.+|..++..+.|++++..+..+.... ...|+||||.+++|.+++......+++.+++.|+.||+.||.|||++||||
T Consensus 50 ~~E~~il~~L~~~~~i~~i~~~~~~~---~~~~lvme~~g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvH 126 (483)
T 3sv0_A 50 LYESKIYRILQGGTGIPNVRWFGVEG---DYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLH 126 (483)
T ss_dssp HHHHHHHHHTTTSTTCCCEEEEEEET---TEEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHHHhcCCCCCCeEEEEEeeC---CEEEEEEECCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCEee
Confidence 36667888888877666665344333 367999999999999999755566999999999999999999999999999
Q ss_pred ccCCCCcEEE---ccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 145 HNVRPSCFVM---SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 145 rDLKP~NILl---~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|||||+|||| +.++.+||+|||++........... .
T Consensus 127 rDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~------------------------------~----------- 165 (483)
T 3sv0_A 127 RDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQH------------------------------I----------- 165 (483)
T ss_dssp CCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCB------------------------------C-----------
T ss_pred cccCcceEEEecCCCCCeEEEEeCCcceeccCCccccc------------------------------c-----------
Confidence 9999999999 5889999999998854322110000 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
. ........||+.|+|||++.+..++.++|||||||+|
T Consensus 166 -----------------------------------------~-~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil 203 (483)
T 3sv0_A 166 -----------------------------------------P-YRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVL 203 (483)
T ss_dssp -----------------------------------------C-CCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHH
T ss_pred -----------------------------------------c-cccccccCCCccccCHHHhcCCCCChHHHHHHHHHHH
Confidence 0 0000125789999999999999999999999999999
Q ss_pred hhccc---cCCCCch--HHHHHHHhhcC---CCCccccccCch-HHHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFC---PFSTGEE--KTRTMSSLRHR---VLPPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt---pf~~~~~--~~~~~~~l~~~---~~p~~~~~~~p~-~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||..... ....+..+... ...+.+...+|. ..+|+.+||+.+|.+||++.+|++
T Consensus 204 ~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~ 271 (483)
T 3sv0_A 204 MYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKR 271 (483)
T ss_dssp HHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCHHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred HHHHhCCCCCccccchhHHHHHHHHhhccccccHHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 99999 6765322 22222222211 111222234444 459999999999999999998875
No 250
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=99.94 E-value=1.2e-27 Score=251.64 Aligned_cols=173 Identities=17% Similarity=0.167 Sum_probs=132.6
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++.+++||||+++++ ++.... .+|+|||| .|++|.++++. + ....++..|+.||+.||.|||++|
T Consensus 77 ~~~~e~~~l~~l~hp~iv~~~~-~~~~~~---~~~lv~e~~~g~~L~~~l~~-~--~~~~~~~~i~~ql~~aL~~lH~~g 149 (286)
T 3uqc_A 77 ETLSRTLRLSRIDKPGVARVLD-VVHTRA---GGLVVAEWIRGGSLQEVADT-S--PSPVGAIRAMQSLAAAADAAHRAG 149 (286)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEE-EEEETT---EEEEEEECCCEEEHHHHHTT-C--CCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhcCCCCCcceeeE-EEEECC---cEEEEEEecCCCCHHHHHhc-C--CChHHHHHHHHHHHHHHHHHHHCC
Confidence 4457788899999999999999 554443 58999999 88999999943 2 466688999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.+|.+||+
T Consensus 150 ivH~Dikp~NIll~~~g~~kl~---------------------------------------------------------- 171 (286)
T 3uqc_A 150 VALSIDHPSRVRVSIDGDVVLA---------------------------------------------------------- 171 (286)
T ss_dssp CCCCCCSGGGEEEETTSCEEEC----------------------------------------------------------
T ss_pred CccCCCCcccEEEcCCCCEEEE----------------------------------------------------------
Confidence 9999999999999999999883
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
++.|++| ++.++|||||||++
T Consensus 172 ----------------------------------------------------~~~~~~~-------~~~~~Di~slG~il 192 (286)
T 3uqc_A 172 ----------------------------------------------------YPATMPD-------ANPQDDIRGIGASL 192 (286)
T ss_dssp ----------------------------------------------------SCCCCTT-------CCHHHHHHHHHHHH
T ss_pred ----------------------------------------------------eccccCC-------CCchhHHHHHHHHH
Confidence 2234443 78999999999999
Q ss_pred hhccc---cCCCCchHHHH---HHHhhcCCCC-ccccccCch-HHHHHHHcCCCCCCCCCChHHHHc
Q 004989 302 FELFC---PFSTGEEKTRT---MSSLRHRVLP-PQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~---~~~l~~~~~p-~~~~~~~p~-~~~Li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||......... ...+.....+ ..+....|. ..+||.+||+.||.+| |+.|+++
T Consensus 193 ~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~ 258 (286)
T 3uqc_A 193 YALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLN 258 (286)
T ss_dssp HHHHHSEECSCCCSBCCCSEECCBCTTSCBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHH
T ss_pred HHHHHCCCCCCcCCcchhhHHHHHHhccCCCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHH
Confidence 99999 77764332100 0111111111 122233444 4599999999999999 9999986
No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.92 E-value=1.3e-25 Score=258.15 Aligned_cols=145 Identities=20% Similarity=0.132 Sum_probs=104.6
Q ss_pred chhhhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 64 KHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 64 ~~~e~~~L~~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
..+|+.+|.++ .|+||+++++ +++++. .+|||||| .|++|.++|.+.+ ++++. .|+.||+.||+|||++|
T Consensus 288 ~~~E~~~l~~~~~~~~i~~~~~-~~ed~~---~~yLVMEyv~G~~L~d~i~~~~-~l~~~---~I~~QIl~AL~ylH~~G 359 (569)
T 4azs_A 288 LHNEIKFLTQPPAGFDAPAVLA-HGENAQ---SGWLVMEKLPGRLLSDMLAAGE-EIDRE---KILGSLLRSLAALEKQG 359 (569)
T ss_dssp HHHHHHHHHSCCTTCCCCCEEE-EEECSS---EEEEEEECCCSEEHHHHHHTTC-CCCHH---HHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhcCCCCCeeEEEE-EEEECC---EEEEEEecCCCCcHHHHHHhCC-CCCHH---HHHHHHHHHHHHHHHCC
Confidence 33788899998 7999999999 666664 67999999 9999999996654 47664 48899999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcccCCCCCCcccccccccccccCCCCCCchhhhhhhhcccccccccccCCCCCCc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
||||||||+||||+.+|++||+|||+++....+..
T Consensus 360 IIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~~--------------------------------------------- 394 (569)
T 4azs_A 360 FWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCS--------------------------------------------- 394 (569)
T ss_dssp CEESCCCGGGEEECTTSCEEECCCTTEESCC---C---------------------------------------------
T ss_pred ceeccCchHhEEECCCCCEEEeecccCeeCCCCCc---------------------------------------------
Confidence 99999999999999999999999888754321100
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCcccccCCCCCccccchhhhchh
Q 004989 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
.....+||+.|||||++.+. +..++|+|++|+++
T Consensus 395 ---------------------------------------------~~~t~vGTp~YmAPE~l~g~-~~~~~d~~s~g~~~ 428 (569)
T 4azs_A 395 ---------------------------------------------WPTNLVQSFFVFVNELFAEN-KSWNGFWRSAPVHP 428 (569)
T ss_dssp ---------------------------------------------CSHHHHHHHHHHHHHHC------------------
T ss_pred ---------------------------------------------cccCceechhhccHHHhCCC-CCCcccccccccch
Confidence 00125799999999999875 67889999999999
Q ss_pred hhcccc
Q 004989 302 FELFCP 307 (720)
Q Consensus 302 ~eLltp 307 (720)
|+|.++
T Consensus 429 ~~l~~~ 434 (569)
T 4azs_A 429 FNLPQP 434 (569)
T ss_dssp CCCCTT
T ss_pred hhhccc
Confidence 999873
No 252
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.73 E-value=3.9e-19 Score=203.13 Aligned_cols=93 Identities=13% Similarity=0.097 Sum_probs=78.0
Q ss_pred chhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 004989 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..+|.+++||||+++.. ++.... ..|+|||| .|++|.+++.. ++.|+.||+.||.|||++||
T Consensus 386 ~~~E~~il~~l~h~nIv~~~~-~~~~~~---~~~lVmE~~~ggsL~~~l~~---------~~~i~~qi~~aL~~LH~~gI 452 (540)
T 3en9_A 386 TAREARYLALVKDFGIPAPYI-FDVDLD---NKRIMMSYINGKLAKDVIED---------NLDIAYKIGEIVGKLHKNDV 452 (540)
T ss_dssp HHHHHHHHHHGGGGTCCCCCE-EEEETT---TTEEEEECCCSEEHHHHSTT---------CTHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHhcCCCCcCceEE-EEEeCC---ccEEEEECCCCCCHHHHHHH---------HHHHHHHHHHHHHHHHHCcC
Confidence 458889999999999994433 112222 34999999 78999999954 56899999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeecCcccCC
Q 004989 143 VVHNVRPSCFVMSSFNHVSFIESASCSDS 171 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~ 171 (720)
+||||||+|||++. .+||+|||+++..
T Consensus 453 iHrDiKp~NILl~~--~~kL~DFGla~~~ 479 (540)
T 3en9_A 453 IHNDLTTSNFIFDK--DLYIIDFGLGKIS 479 (540)
T ss_dssp ECTTCCTTSEEESS--SEEECCCTTCEEC
T ss_pred ccCCCCHHHEEECC--eEEEEECccCEEC
Confidence 99999999999998 9999999988543
No 253
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.58 E-value=7.3e-15 Score=158.07 Aligned_cols=127 Identities=9% Similarity=0.030 Sum_probs=99.9
Q ss_pred hhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCE
Q 004989 581 EGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKL 659 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i 659 (720)
++..++|...+-+.+..++. .+.+|.+.|.+|+|+|||++|||||.|++|+|||+.+. .++..+. |...|
T Consensus 102 dg~v~lWd~~~~~~~~~~~~-~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~--------~~~~~~~~h~~~V 172 (344)
T 4gqb_B 102 SGAVELWELDENETLIVSKF-CKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQ--------VVLSSYRAHAAQV 172 (344)
T ss_dssp TSEEEEEEECTTSSCEEEEE-EEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT--------EEEEEECCCSSCE
T ss_pred CCEEEEEeccCCCceeEeec-cccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCC--------cEEEEEcCcCCce
Confidence 44455555544333333321 24478999999999999999999999999999999876 3444444 57789
Q ss_pred EEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE---------EEEEeecCC-ceEEEecCccceE
Q 004989 660 SSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA---------LYCIVLNKL-LIIFRYGMFQEVK 716 (720)
Q Consensus 660 ~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~---------v~~v~~~~~-~~~~~~~~~~~~~ 716 (720)
.+++|+|++..+||||+.||+|+|||+++++++.+ +.+++|++. ..++++|+.|...
T Consensus 173 ~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v 239 (344)
T 4gqb_B 173 TCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTV 239 (344)
T ss_dssp EEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEE
T ss_pred EEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcE
Confidence 99999998888999999999999999999998875 789999985 5678888887643
No 254
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.58 E-value=1.6e-14 Score=153.59 Aligned_cols=122 Identities=14% Similarity=0.132 Sum_probs=101.7
Q ss_pred hhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCE
Q 004989 581 EGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKL 659 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i 659 (720)
++..+++...+.+++.+++ +|...|.+++|+|||++|||||.|++|+|||+++. .++..+. |...|
T Consensus 185 dg~i~iwd~~~~~~~~~~~-----~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~--------~~~~~~~~h~~~v 251 (321)
T 3ow8_A 185 DGIINIFDIATGKLLHTLE-----GHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHA--------NLAGTLSGHASWV 251 (321)
T ss_dssp TSCEEEEETTTTEEEEEEC-----CCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTC--------CEEEEECCCSSCE
T ss_pred CCeEEEEECCCCcEEEEEc-----ccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCc--------ceeEEEcCCCCce
Confidence 3455666666667777664 45889999999999999999999999999998765 2333343 46779
Q ss_pred EEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceE
Q 004989 660 SSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 660 ~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
.+++|+|+ +.+||||+.||+|+|||+.+++++.+ |++++|++.+..+++++.|...
T Consensus 252 ~~~~~sp~-~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i 314 (321)
T 3ow8_A 252 LNVAFCPD-DTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEI 314 (321)
T ss_dssp EEEEECTT-SSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCCE
T ss_pred EEEEECCC-CCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeE
Confidence 99999996 56999999999999999999999987 8999999999999999988643
No 255
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.57 E-value=1.9e-14 Score=151.20 Aligned_cols=104 Identities=10% Similarity=0.003 Sum_probs=90.7
Q ss_pred CCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCEEEEEEecCCCCEEEEEeCCCcEE
Q 004989 604 LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEGVVQ 682 (720)
Q Consensus 604 ~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~l~w~~~~~~~laS~s~D~~v~ 682 (720)
.+|.+.|.+|+|+|||++||||+.|++|+|||+.+. .++..+. +...|.+++|+|+ +++||||+.|++|+
T Consensus 10 ~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~--------~~~~~~~~~~~~v~~~~~~~~-~~~l~s~s~d~~i~ 80 (304)
T 2ynn_A 10 SNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQ--------VEVRSIQVTETPVRAGKFIAR-KNWIIVGSDDFRIR 80 (304)
T ss_dssp EEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTT--------EEEEEEECCSSCEEEEEEEGG-GTEEEEEETTSEEE
T ss_pred cCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCC--------ceeEEeeccCCcEEEEEEeCC-CCEEEEECCCCEEE
Confidence 456899999999999999999999999999998775 2333443 4667999999995 57999999999999
Q ss_pred EEECCCCcEEEE-------EEEEeecCCceEEEecCccceE
Q 004989 683 VGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 683 lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
|||+.+|+++.+ |++++|+|.+..+++|+.|..-
T Consensus 81 vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v 121 (304)
T 2ynn_A 81 VFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTV 121 (304)
T ss_dssp EEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCE
T ss_pred EEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeE
Confidence 999999999876 8999999999999999998644
No 256
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.55 E-value=2.4e-14 Score=154.02 Aligned_cols=127 Identities=9% Similarity=0.070 Sum_probs=101.9
Q ss_pred chhhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCC-EEEEeeCCCcEEEeeCCcccccccccccceEEe---
Q 004989 578 PFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGE-LFAAAGVNKKIKVFECDAIINENRDIHYPVVEM--- 653 (720)
Q Consensus 578 ~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~-~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~--- 653 (720)
.-.++..++|...+.+++.++. +|.+.|.+++|+|++. +|||||.|++|+|||+++. .++..+
T Consensus 145 gs~d~~i~iwd~~~~~~~~~~~-----~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~--------~~~~~~~~~ 211 (344)
T 4gqb_B 145 GSKDICIKVWDLAQQVVLSSYR-----AHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCP--------KPASQIGCS 211 (344)
T ss_dssp EETTSCEEEEETTTTEEEEEEC-----CCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSS--------SCEEECC--
T ss_pred EeCCCeEEEEECCCCcEEEEEc-----CcCCceEEEEecCCCCCceeeecccccccccccccc--------ceeeeeecc
Confidence 3445567777777777777764 4689999999999995 7999999999999999876 233332
Q ss_pred cCCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCc-eEEEecCccceEE
Q 004989 654 ASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLL-IIFRYGMFQEVKY 717 (720)
Q Consensus 654 ~~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~-------v~~v~~~~~~-~~~~~~~~~~~~~ 717 (720)
.+...+.+++|+|+++++||+|+.||+|+|||+++++++.+ |++++|+|.+ .++++|+.|...+
T Consensus 212 ~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~ 283 (344)
T 4gqb_B 212 APGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLA 283 (344)
T ss_dssp --CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEE
T ss_pred eeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEE
Confidence 22456999999998889999999999999999999999886 8999999987 5789999886544
No 257
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.54 E-value=4.1e-14 Score=148.22 Aligned_cols=108 Identities=13% Similarity=0.161 Sum_probs=87.5
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecC-CCCEEEEEeCCCc
Q 004989 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSY-IKSQIASSNFEGV 680 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~w~~~-~~~~laS~s~D~~ 680 (720)
+.+|.+.|.+++|+|||++|||||.|++|+|||+.... ..++..+ .|...|.+|+|+|. .+++||||+.||+
T Consensus 5 ~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~------~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~ 78 (297)
T 2pm7_B 5 ANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGET------HKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGK 78 (297)
T ss_dssp CCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSC------BCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTE
T ss_pred ccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCC------cEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCE
Confidence 45789999999999999999999999999999986431 1233344 45778999999864 4679999999999
Q ss_pred EEEEECCCCc--EEEE-------EEEEeecCC--ceEEEecCccceE
Q 004989 681 VQVGQVLHLI--YFSA-------LYCIVLNKL--LIIFRYGMFQEVK 716 (720)
Q Consensus 681 v~lWD~~tg~--~~~~-------v~~v~~~~~--~~~~~~~~~~~~~ 716 (720)
|+|||+.+++ .+.+ |++++|+|. +..+++|+.|...
T Consensus 79 v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v 125 (297)
T 2pm7_B 79 VMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKV 125 (297)
T ss_dssp EEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEE
T ss_pred EEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcE
Confidence 9999999874 3332 899999997 7788888887643
No 258
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.54 E-value=5.1e-14 Score=150.53 Aligned_cols=113 Identities=10% Similarity=0.088 Sum_probs=91.9
Q ss_pred CCCCCCCCeEEEEE-----CC-CCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEE
Q 004989 602 DLLNSSNLVCSLSF-----DR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIAS 674 (720)
Q Consensus 602 ~~~~~~~~V~sv~f-----~~-dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~w~~~~~~~laS 674 (720)
.|.+|.+.|.+|+| ++ ||.+|||||.|++|+|||+....... ....+...+ .|...|.+|+|+|+ +.+|||
T Consensus 16 ~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~-~~~~~~~~l~~h~~~V~~~~~~~~-~~~l~s 93 (343)
T 2xzm_R 16 ILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNG-YFGIPHKALTGHNHFVSDLALSQE-NCFAIS 93 (343)
T ss_dssp EEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSS-BSEEEEEEECCCSSCEEEEEECSS-TTEEEE
T ss_pred eeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCccc-ccccccchhccCCCceEEEEECCC-CCEEEE
Confidence 35577999999999 76 99999999999999999986532111 011244444 45678999999995 569999
Q ss_pred EeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceE
Q 004989 675 SNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 675 ~s~D~~v~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
|+.|++|+|||+++++++.+ |++++|+|.+..+++|+.|...
T Consensus 94 ~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i 142 (343)
T 2xzm_R 94 SSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREI 142 (343)
T ss_dssp EETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCE
T ss_pred EcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEE
Confidence 99999999999999998876 8999999999999999988643
No 259
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.53 E-value=4.4e-14 Score=149.63 Aligned_cols=110 Identities=12% Similarity=0.117 Sum_probs=91.7
Q ss_pred CCCCCCCCeEEEEECCCC-CEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCEEEEEEecCCCCEEEEEeCCC
Q 004989 602 DLLNSSNLVCSLSFDRDG-ELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEG 679 (720)
Q Consensus 602 ~~~~~~~~V~sv~f~~dg-~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~l~w~~~~~~~laS~s~D~ 679 (720)
.|.+|.+.|.+|+|+|++ .+|||||.|++|+|||+..... ....|+..+. |...|.+++|+|+ +.+||||+.|+
T Consensus 12 ~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~---~~~~~~~~~~~h~~~v~~~~~s~d-g~~l~s~s~D~ 87 (319)
T 3frx_A 12 TLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQ---KFGVPVRSFKGHSHIVQDCTLTAD-GAYALSASWDK 87 (319)
T ss_dssp EECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETT---EEEEEEEEEECCSSCEEEEEECTT-SSEEEEEETTS
T ss_pred EEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCc---cccccceEEeCCcccEEEEEECCC-CCEEEEEeCCC
Confidence 356779999999999976 8999999999999999754311 1113455554 5678999999995 56999999999
Q ss_pred cEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccce
Q 004989 680 VVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 680 ~v~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
+|+|||+.+|+++.+ |++++|++.+..+++|+.|..
T Consensus 88 ~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~ 130 (319)
T 3frx_A 88 TLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKT 130 (319)
T ss_dssp EEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSC
T ss_pred EEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCe
Confidence 999999999998876 899999999999999999864
No 260
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.52 E-value=3.6e-14 Score=149.13 Aligned_cols=125 Identities=14% Similarity=0.152 Sum_probs=102.0
Q ss_pred chhhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCC
Q 004989 578 PFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASR 656 (720)
Q Consensus 578 ~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~ 656 (720)
.-.++..++|.+.+.+.+..+. +|...|.+++|+|+|++|||||.|++|+|||+.++ .++..+ .|.
T Consensus 31 ~~~dg~v~lWd~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~--------~~~~~~~~h~ 97 (304)
T 2ynn_A 31 TLYSGRVELWNYETQVEVRSIQ-----VTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTG--------EKVVDFEAHP 97 (304)
T ss_dssp EETTSEEEEEETTTTEEEEEEE-----CCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTC--------CEEEEEECCS
T ss_pred EcCCCcEEEEECCCCceeEEee-----ccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCC--------cEEEEEeCCC
Confidence 3345667888888877777775 34789999999999999999999999999998876 233333 457
Q ss_pred CCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE--------EEEEeecC-CceEEEecCccceE
Q 004989 657 SKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA--------LYCIVLNK-LLIIFRYGMFQEVK 716 (720)
Q Consensus 657 ~~i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~--------v~~v~~~~-~~~~~~~~~~~~~~ 716 (720)
..|.+|+|+|+ +.+||||+.||+|+|||++++..+.. |+|++|+| ....+++|+.|...
T Consensus 98 ~~v~~~~~~~~-~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v 165 (304)
T 2ynn_A 98 DYIRSIAVHPT-KPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTV 165 (304)
T ss_dssp SCEEEEEECSS-SSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEE
T ss_pred CcEEEEEEcCC-CCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeE
Confidence 78999999996 56999999999999999998855432 89999999 57889999988643
No 261
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.52 E-value=1.6e-15 Score=158.95 Aligned_cols=89 Identities=15% Similarity=0.036 Sum_probs=72.8
Q ss_pred hchhhhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++ | +++++ ++..+ ..|+|||| .|++|.+ +.. .+...++.||+.||.|||++|
T Consensus 150 ~~~~E~~~l~~l~--~-~~v~~-~~~~~----~~~lvmE~~~g~~L~~-l~~-------~~~~~i~~qi~~~l~~lH~~g 213 (282)
T 1zar_A 150 SARNEFRALQKLQ--G-LAVPK-VYAWE----GNAVLMELIDAKELYR-VRV-------ENPDEVLDMILEEVAKFYHRG 213 (282)
T ss_dssp HHHHHHHHHHHTT--T-SSSCC-EEEEE----TTEEEEECCCCEEGGG-CCC-------SCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhcc--C-CCcCe-EEecc----ceEEEEEecCCCcHHH-cch-------hhHHHHHHHHHHHHHHHHHCC
Confidence 3458888999998 5 66666 44332 35999999 7889988 521 234579999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeecCcc
Q 004989 142 IVVHNVRPSCFVMSSFNHVSFIESASC 168 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a 168 (720)
|+||||||+|||++ ++.+||+|||++
T Consensus 214 iiHrDlkp~NILl~-~~~vkl~DFG~a 239 (282)
T 1zar_A 214 IVHGDLSQYNVLVS-EEGIWIIDFPQS 239 (282)
T ss_dssp EECSCCSTTSEEEE-TTEEEECCCTTC
T ss_pred CEeCCCCHHHEEEE-CCcEEEEECCCC
Confidence 99999999999999 999999988877
No 262
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.52 E-value=3.1e-14 Score=156.53 Aligned_cols=122 Identities=15% Similarity=0.178 Sum_probs=100.5
Q ss_pred hhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCC
Q 004989 580 LEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSK 658 (720)
Q Consensus 580 ~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~ 658 (720)
.++..++|.+.+.+.+.++ .+|.+.|.+|+|+|+|++|||||.|++|+|||+.+. .++..+ .|...
T Consensus 128 ~Dg~i~vwd~~~~~~~~~l-----~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~--------~~~~~~~~h~~~ 194 (410)
T 1vyh_C 128 EDATIKVWDYETGDFERTL-----KGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF--------ECIRTMHGHDHN 194 (410)
T ss_dssp SSSCEEEEETTTCCCCEEE-----CCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSS--------CEEECCCCCSSC
T ss_pred CCCeEEEEECCCCcEEEEE-----eccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC--------ceeEEEcCCCCC
Confidence 3445566666665555555 456899999999999999999999999999998765 233333 34668
Q ss_pred EEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccce
Q 004989 659 LSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 659 i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
|++|+|+|+ +++|+||+.|++|++||+++|+++.+ |.+++|++.+..+++|+.|..
T Consensus 195 V~~v~~~p~-~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~ 257 (410)
T 1vyh_C 195 VSSVSIMPN-GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQT 257 (410)
T ss_dssp EEEEEECSS-SSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred EEEEEEeCC-CCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCe
Confidence 999999995 56999999999999999999999886 789999999999999998854
No 263
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.52 E-value=2.6e-14 Score=151.19 Aligned_cols=109 Identities=10% Similarity=0.150 Sum_probs=85.1
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecC-CCCEEEEEeCCCc
Q 004989 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSY-IKSQIASSNFEGV 680 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~w~~~-~~~~laS~s~D~~ 680 (720)
+.+|.+.|.+|+|+|||++|||||.|++|+|||+.+... .++..+ .|...|.+|+|+|+ .+++||||+.|++
T Consensus 9 ~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~------~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~ 82 (316)
T 3bg1_A 9 DTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQ------ILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRK 82 (316)
T ss_dssp -----CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEE------EEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSC
T ss_pred cccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCc------EEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCE
Confidence 457899999999999999999999999999999865410 123333 45778999999863 4679999999999
Q ss_pred EEEEECCCCc--EEEE-------EEEEeecCC--ceEEEecCccceEE
Q 004989 681 VQVGQVLHLI--YFSA-------LYCIVLNKL--LIIFRYGMFQEVKY 717 (720)
Q Consensus 681 v~lWD~~tg~--~~~~-------v~~v~~~~~--~~~~~~~~~~~~~~ 717 (720)
|+|||+++++ .+.+ |++++|+|. +.++++|+.|...+
T Consensus 83 v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~ 130 (316)
T 3bg1_A 83 VIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAIS 130 (316)
T ss_dssp EEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEE
T ss_pred EEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEE
Confidence 9999999884 4433 789999997 78899999886544
No 264
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.52 E-value=5.9e-14 Score=154.28 Aligned_cols=106 Identities=9% Similarity=0.032 Sum_probs=92.2
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCCcE
Q 004989 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~w~~~~~~~laS~s~D~~v 681 (720)
+.+|.+.|.+++|+|++.+|||||.|++|+|||+.++. .+..+ .|...|.+|+|+|+ +.+||||+.||+|
T Consensus 104 l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~--------~~~~l~~h~~~V~~v~~~~~-~~~l~sgs~D~~i 174 (410)
T 1vyh_C 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGD--------FERTLKGHTDSVQDISFDHS-GKLLASCSADMTI 174 (410)
T ss_dssp EECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCC--------CCEEECCCSSCEEEEEECTT-SSEEEEEETTSCC
T ss_pred ecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc--------EEEEEeccCCcEEEEEEcCC-CCEEEEEeCCCeE
Confidence 45679999999999999999999999999999988762 23333 34678999999995 5699999999999
Q ss_pred EEEECCCCcEEEE-------EEEEeecCCceEEEecCccceEE
Q 004989 682 QVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 682 ~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
+|||+.+++++.+ |+|++|+|.+..+.+|+.|...+
T Consensus 175 ~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~ 217 (410)
T 1vyh_C 175 KLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIK 217 (410)
T ss_dssp CEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEE
T ss_pred EEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEE
Confidence 9999999999876 89999999999999999987543
No 265
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.51 E-value=8.3e-14 Score=150.25 Aligned_cols=125 Identities=10% Similarity=0.078 Sum_probs=99.1
Q ss_pred hhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCC-CEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCE
Q 004989 582 GLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDG-ELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKL 659 (720)
Q Consensus 582 ~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg-~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i 659 (720)
+..++|...+.+.+..+. +..|...|.+|+|+|++ .+||+|+.|++|+|||+++. .++..+. +...|
T Consensus 204 g~v~~wd~~~~~~~~~~~---~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~--------~~~~~~~~~~~~v 272 (357)
T 4g56_B 204 GRILLWDTRKPKPATRID---FCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNP--------DSAQTSAVHSQNI 272 (357)
T ss_dssp SCEEECCTTSSSCBCBCC---CTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCG--------GGCEEECCCSSCE
T ss_pred CceEEEECCCCceeeeee---eccccccccchhhhhcccceEEEeecccceeEEECCCC--------cEeEEEeccceeE
Confidence 344555554444444332 34567889999999985 68999999999999998876 2344443 46789
Q ss_pred EEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE------EEEEeecC-CceEEEecCccceEE
Q 004989 660 SSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA------LYCIVLNK-LLIIFRYGMFQEVKY 717 (720)
Q Consensus 660 ~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~------v~~v~~~~-~~~~~~~~~~~~~~~ 717 (720)
++|+|+|+++.+||||+.||+|+|||+.+++++.. |++|+|+| .+..+++|+.|...+
T Consensus 273 ~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~ 337 (357)
T 4g56_B 273 TGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDLSHRDFVTGVAWSPLDHSKFTTVGWDHKVL 337 (357)
T ss_dssp EEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEECCCSSCEEEEEECSSSTTEEEEEETTSCEE
T ss_pred EEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEECCCCCCEEEEEEeCCCCCEEEEEcCCCeEE
Confidence 99999998878999999999999999999999886 99999998 688999999986543
No 266
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.51 E-value=1.8e-13 Score=146.09 Aligned_cols=121 Identities=12% Similarity=0.152 Sum_probs=99.6
Q ss_pred hhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCE
Q 004989 581 EGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKL 659 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i 659 (720)
++..++|...+.+.+.++ .+|...|.+++|+|+|.+||||+.|++|+|||+++. .++..+. |...|
T Consensus 163 d~~i~~wd~~~~~~~~~~-----~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~--------~~~~~~~~h~~~v 229 (340)
T 1got_B 163 DTTCALWDIETGQQTTTF-----TGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREG--------MCRQTFTGHESDI 229 (340)
T ss_dssp TSCEEEEETTTTEEEEEE-----CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC--------SEEEEECCCSSCE
T ss_pred CCcEEEEECCCCcEEEEE-----cCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCC--------eeEEEEcCCcCCE
Confidence 445566666666666555 456899999999999999999999999999998765 2344443 46789
Q ss_pred EEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE---------EEEEeecCCceEEEecCccce
Q 004989 660 SSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA---------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 660 ~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~---------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
.+|+|+|+ +++||||+.||+|+|||+++++.+.+ |++++|+|.+..+.+|+-|..
T Consensus 230 ~~v~~~p~-~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~ 293 (340)
T 1got_B 230 NAICFFPN-GNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFN 293 (340)
T ss_dssp EEEEECTT-SSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSE
T ss_pred EEEEEcCC-CCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCe
Confidence 99999995 56999999999999999999988765 789999999999999988754
No 267
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.50 E-value=1.3e-13 Score=147.20 Aligned_cols=123 Identities=10% Similarity=0.119 Sum_probs=97.9
Q ss_pred hhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecC---CC
Q 004989 581 EGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS---RS 657 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~---~~ 657 (720)
++..++|...+.+.+.+ +.+|...|.+|+|+|+|.+|||||.|++|+|||+++.. ++..+.+ ..
T Consensus 205 d~~v~~wd~~~~~~~~~-----~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~--------~~~~~~~~~~~~ 271 (340)
T 1got_B 205 DASAKLWDVREGMCRQT-----FTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQ--------ELMTYSHDNIIC 271 (340)
T ss_dssp TSCEEEEETTTCSEEEE-----ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE--------EEEEECCTTCCS
T ss_pred CCcEEEEECCCCeeEEE-----EcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCc--------EEEEEccCCccc
Confidence 33444554444444444 45678999999999999999999999999999987651 2333333 24
Q ss_pred CEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceEE
Q 004989 658 KLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 658 ~i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
.|.+++|+|+ +.+||+|+.||+|+|||+.+++.+.+ |+|++|++.+..+++|+.|...+
T Consensus 272 ~v~~~~~s~~-g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~ 337 (340)
T 1got_B 272 GITSVSFSKS-GRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLK 337 (340)
T ss_dssp CEEEEEECTT-SSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEE
T ss_pred ceEEEEECCC-CCEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEE
Confidence 6999999995 56999999999999999999998876 89999999999999999997544
No 268
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.49 E-value=1.4e-13 Score=156.81 Aligned_cols=104 Identities=14% Similarity=0.131 Sum_probs=89.0
Q ss_pred CCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCCc
Q 004989 602 DLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGV 680 (720)
Q Consensus 602 ~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~w~~~~~~~laS~s~D~~ 680 (720)
.|.||++.|++|+|+|||++|||||.|++|+|||.. . .++..+ .|...|.+|+|+|+ +.+|||++.|++
T Consensus 11 ~L~GH~~~V~~~a~spdg~~las~~~d~~v~iWd~~-~--------~~~~~l~gh~~~V~~l~fspd-g~~las~~~d~~ 80 (577)
T 2ymu_A 11 RLEAHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN-G--------QLLQTLTGHSSSVWGVAFSPD-GQTIASASDDKT 80 (577)
T ss_dssp EECCCSSCEEEEEECTTSSCEEEEETTSEEEEECTT-S--------CEEEEEECCSSCEEEEEECTT-SSEEEEEETTSC
T ss_pred EECCCCCcEEEEEECCCCCEEEEEeCCCEEEEEECC-C--------CEEEEEeCCCCCEEEEEECCC-CCEEEEEeCCCE
Confidence 478999999999999999999999999999999953 2 134444 35778999999995 569999999999
Q ss_pred EEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceE
Q 004989 681 VQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 681 v~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
|+|||+ +|+++.+ |++++|+|.+..+++++.|...
T Consensus 81 i~vWd~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~~ 122 (577)
T 2ymu_A 81 VKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTV 122 (577)
T ss_dssp EEEEET-TSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred EEEEEC-CCCEEEEEECCCCCEEEEEECCCCCEEEEEcCCCce
Confidence 999996 6777776 8999999999999999887654
No 269
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.49 E-value=4e-14 Score=154.75 Aligned_cols=109 Identities=9% Similarity=-0.050 Sum_probs=88.7
Q ss_pred CCCCCCCCCeEEEEECC--------CCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEE
Q 004989 601 GDLLNSSNLVCSLSFDR--------DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQI 672 (720)
Q Consensus 601 ~~~~~~~~~V~sv~f~~--------dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~l 672 (720)
+.+.||.+.|++|+|+| ||++|||||.|++|||||+.+.. .......+++.|.+|+|+|+++++|
T Consensus 130 ~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~-------~~~~~~~~~~~v~~v~~~p~~~~~l 202 (393)
T 4gq1_A 130 GGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEG-------PILAGYPLSSPGISVQFRPSNPNQL 202 (393)
T ss_dssp CTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTE-------EEEEEEECSSCEEEEEEETTEEEEE
T ss_pred cccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCc-------eeeeecCCCCCcEEEEECCCCCceE
Confidence 56789999999999998 99999999999999999986541 2234456788999999999877899
Q ss_pred EEEeCCCcEEEEECCCCcEEEE--------------------------------EEEEeec-CCceEEEecCccceE
Q 004989 673 ASSNFEGVVQVGQVLHLIYFSA--------------------------------LYCIVLN-KLLIIFRYGMFQEVK 716 (720)
Q Consensus 673 aS~s~D~~v~lWD~~tg~~~~~--------------------------------v~~v~~~-~~~~~~~~~~~~~~~ 716 (720)
|||+.||+|+|||+++++...+ +.++.|+ +.+..+.+++.|...
T Consensus 203 ~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i 279 (393)
T 4gq1_A 203 IVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAW 279 (393)
T ss_dssp EEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEE
T ss_pred EecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCE
Confidence 9999999999999999876543 4567775 788888888888643
No 270
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.48 E-value=1.9e-13 Score=146.44 Aligned_cols=116 Identities=10% Similarity=0.162 Sum_probs=90.3
Q ss_pred ceEEeeeeccCCCCCCCC-CeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEE-ecCCCCEEEEEEecCC
Q 004989 591 KLRVKADLNQGDLLNSSN-LVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVE-MASRSKLSSICWNSYI 668 (720)
Q Consensus 591 ~~~~~~~l~~~~~~~~~~-~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~i~~l~w~~~~ 668 (720)
.++.+.+|+ +|.. .|.+|+|+|||++|||||.|++|+|||+...... +.... ..|...|.+|+|+|+
T Consensus 4 ~~~~~~~~~-----~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~-----~~~~~~~~h~~~v~~~~~sp~- 72 (345)
T 3fm0_A 4 SLVLLGRVP-----AHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWI-----CKSVLSEGHQRTVRKVAWSPC- 72 (345)
T ss_dssp CEEEEEEEC-----CSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEE-----EEEEECSSCSSCEEEEEECTT-
T ss_pred cEEEeeeec-----CCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcce-----eeeeeccccCCcEEEEEECCC-
Confidence 345566665 3455 8999999999999999999999999997654100 01111 235678999999995
Q ss_pred CCEEEEEeCCCcEEEEECCCCc--EEEE-------EEEEeecCCceEEEecCccceEE
Q 004989 669 KSQIASSNFEGVVQVGQVLHLI--YFSA-------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 669 ~~~laS~s~D~~v~lWD~~tg~--~~~~-------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
+++||||+.|++|+|||+.++. ++.+ |++++|+|.+..+++|+.|...+
T Consensus 73 g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~ 130 (345)
T 3fm0_A 73 GNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVW 130 (345)
T ss_dssp SSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred CCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEE
Confidence 5799999999999999998874 4443 89999999999999999886443
No 271
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.48 E-value=2.8e-13 Score=144.17 Aligned_cols=110 Identities=7% Similarity=0.163 Sum_probs=82.4
Q ss_pred CCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCCcEEE
Q 004989 605 NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGVVQV 683 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~w~~~~~~~laS~s~D~~v~l 683 (720)
+|...|.+|+|+|+|++|||||.|++|+|||........... .++..+ .|...|.+|+|+|+ +++||||+.|++|+|
T Consensus 56 ~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~-~~~~~~~~h~~~V~~v~~sp~-g~~las~s~D~~v~i 133 (330)
T 2hes_X 56 AHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEM-DLLAIIEGHENEVKGVAWSND-GYYLATCSRDKSVWI 133 (330)
T ss_dssp CCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCC-EEEEEEC----CEEEEEECTT-SCEEEEEETTSCEEE
T ss_pred CccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccc-eeEEEEcCCCCcEEEEEECCC-CCEEEEEeCCCEEEE
Confidence 378999999999999999999999999999985431110111 133333 35778999999996 569999999999999
Q ss_pred EECCC-C---cEEEE-------EEEEeecCCceEEEecCccceE
Q 004989 684 GQVLH-L---IYFSA-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 684 WD~~t-g---~~~~~-------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
||+.+ + +++.. |++++|+|.+..+++|+.|...
T Consensus 134 wd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i 177 (330)
T 2hes_X 134 WETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTV 177 (330)
T ss_dssp EECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCE
T ss_pred EeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeE
Confidence 99943 2 44443 8999999999999999998643
No 272
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.48 E-value=3.6e-13 Score=141.22 Aligned_cols=104 Identities=18% Similarity=0.290 Sum_probs=89.8
Q ss_pred CCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCCcEE
Q 004989 604 LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGVVQ 682 (720)
Q Consensus 604 ~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~w~~~~~~~laS~s~D~~v~ 682 (720)
.+|...|.+++|+|||++||||+.|++|+|||..+.. ....+ .|...|.+++|+|+ +++||+|+.||+|+
T Consensus 20 ~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~--------~~~~~~~h~~~v~~~~~~~~-~~~l~s~~~d~~i~ 90 (312)
T 4ery_A 20 AGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK--------FEKTISGHKLGISDVAWSSD-SNLLVSASDDKTLK 90 (312)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC--------EEEEECCCSSCEEEEEECTT-SSEEEEEETTSEEE
T ss_pred cccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcc--------cchhhccCCCceEEEEEcCC-CCEEEEECCCCEEE
Confidence 4668999999999999999999999999999986651 22333 34678999999995 57999999999999
Q ss_pred EEECCCCcEEEE-------EEEEeecCCceEEEecCccceE
Q 004989 683 VGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 683 lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
|||+.+++++.. |+|++|++.+..+.+|+.|...
T Consensus 91 vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i 131 (312)
T 4ery_A 91 IWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 131 (312)
T ss_dssp EEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCE
T ss_pred EEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcE
Confidence 999999998876 8899999999999999988643
No 273
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.48 E-value=2.4e-13 Score=144.34 Aligned_cols=103 Identities=11% Similarity=0.197 Sum_probs=90.0
Q ss_pred CCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCEEEEEEecCCCCEEEEEeCCCcEEE
Q 004989 605 NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEGVVQV 683 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~l~w~~~~~~~laS~s~D~~v~l 683 (720)
.|...|.+++|+|||++||+|+.|++|+|||+.+. .++..+. +...|.+|+|+|+ +.+||||+.||+|+|
T Consensus 162 ~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~--------~~~~~~~~h~~~v~~l~~spd-~~~l~s~s~dg~i~i 232 (321)
T 3ow8_A 162 TRGKFILSIAYSPDGKYLASGAIDGIINIFDIATG--------KLLHTLEGHAMPIRSLTFSPD-SQLLVTASDDGYIKI 232 (321)
T ss_dssp CSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT--------EEEEEECCCSSCCCEEEECTT-SCEEEEECTTSCEEE
T ss_pred CCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCC--------cEEEEEcccCCceeEEEEcCC-CCEEEEEcCCCeEEE
Confidence 45788999999999999999999999999998775 2444444 4667999999995 569999999999999
Q ss_pred EECCCCcEEEE-------EEEEeecCCceEEEecCccceE
Q 004989 684 GQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 684 WD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
||+++++++.+ |++++|+|.+..+++|+.|...
T Consensus 233 wd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v 272 (321)
T 3ow8_A 233 YDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSV 272 (321)
T ss_dssp EETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred EECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcE
Confidence 99999998876 8999999999999999998643
No 274
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.48 E-value=2.6e-13 Score=157.11 Aligned_cols=131 Identities=13% Similarity=0.143 Sum_probs=98.1
Q ss_pred hhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEE
Q 004989 581 EGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLS 660 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~ 660 (720)
+...++|.....+.+.++ .+|...|.+|+|+|||++|||||.|++|+|||..++.....-....+....|...|.
T Consensus 169 D~~v~lwd~~~~~~~~~l-----~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~ 243 (611)
T 1nr0_A 169 DNTVAIFEGPPFKFKSTF-----GEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVF 243 (611)
T ss_dssp TSCEEEEETTTBEEEEEE-----CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEE
T ss_pred CCeEEEEECCCCeEeeee-----ccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEE
Confidence 344556665556666555 456899999999999999999999999999998765210000000001114677899
Q ss_pred EEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE----------------------------------------------
Q 004989 661 SICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA---------------------------------------------- 694 (720)
Q Consensus 661 ~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~---------------------------------------------- 694 (720)
+|+|+|+ +.+|||++.|++|+|||+.+++++.+
T Consensus 244 ~v~~spd-g~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~g 322 (611)
T 1nr0_A 244 GLTWSPD-GTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYG 322 (611)
T ss_dssp EEEECTT-SSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECC
T ss_pred EEEECCC-CCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcC
Confidence 9999995 56999999999999999999876531
Q ss_pred ----EEEEeecCCceEEEecCccceEE
Q 004989 695 ----LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 695 ----v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
|++++|+|.+..+.+|+.|...+
T Consensus 323 h~~~v~~l~~spdg~~l~s~s~D~~v~ 349 (611)
T 1nr0_A 323 HNKAITALSSSADGKTLFSADAEGHIN 349 (611)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred CCCCEEEEEEeCCCCEEEEEeCCCcEE
Confidence 67899999999999999886543
No 275
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.48 E-value=2.4e-13 Score=144.68 Aligned_cols=108 Identities=15% Similarity=0.238 Sum_probs=83.7
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCCcE
Q 004989 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~w~~~~~~~laS~s~D~~v 681 (720)
+.+|.+.|.+|+|+|||++|||||.|++|+|||+...... ..++..+ .|...|.+|+|+|+ +.+||||+.|++|
T Consensus 103 ~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~----~~~~~~~~~h~~~v~~v~~~p~-~~~l~s~s~D~~i 177 (330)
T 2hes_X 103 IEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEE----YECISVLQEHSQDVKHVIWHPS-EALLASSSYDDTV 177 (330)
T ss_dssp EC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCC----CEEEEEECCCSSCEEEEEECSS-SSEEEEEETTSCE
T ss_pred EcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCC----eEEEEEeccCCCceEEEEECCC-CCEEEEEcCCCeE
Confidence 3567899999999999999999999999999998532110 1233334 34678999999995 5699999999999
Q ss_pred EEEECCCC--cEEEE-------EEEEeecCC--ceEEEecCccce
Q 004989 682 QVGQVLHL--IYFSA-------LYCIVLNKL--LIIFRYGMFQEV 715 (720)
Q Consensus 682 ~lWD~~tg--~~~~~-------v~~v~~~~~--~~~~~~~~~~~~ 715 (720)
+|||+.++ +++.+ |++++|++. +..+.+|+.|..
T Consensus 178 ~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~ 222 (330)
T 2hes_X 178 RIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDST 222 (330)
T ss_dssp EEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSC
T ss_pred EEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCe
Confidence 99999887 55554 899999998 678889888754
No 276
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.48 E-value=3.9e-13 Score=146.65 Aligned_cols=124 Identities=10% Similarity=0.145 Sum_probs=103.1
Q ss_pred hhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEE
Q 004989 581 EGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLS 660 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~ 660 (720)
++..++|...+.+++..++ +|...|.+++|+|+|++|+|||.|++|+|||+++. .++..+.+...+.
T Consensus 144 d~~i~iwd~~~~~~~~~~~-----~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~--------~~~~~~~~~~~v~ 210 (393)
T 1erj_A 144 DRLIRIWDIENRKIVMILQ-----GHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTG--------QCSLTLSIEDGVT 210 (393)
T ss_dssp TSCEEEEETTTTEEEEEEC-----CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT--------EEEEEEECSSCEE
T ss_pred CCeEEEEECCCCcEEEEEc-----cCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCC--------eeEEEEEcCCCcE
Confidence 4456666666666666654 56899999999999999999999999999998875 2344455667899
Q ss_pred EEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE--------------EEEEeecCCceEEEecCccceEE
Q 004989 661 SICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA--------------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 661 ~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~--------------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
+++|+|.++.+||+|+.||+|+|||+++++.+.. |++++|++.+..+++|+.|...+
T Consensus 211 ~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~ 281 (393)
T 1erj_A 211 TVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVK 281 (393)
T ss_dssp EEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred EEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEE
Confidence 9999997778999999999999999999987653 78999999999999999986443
No 277
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.47 E-value=3.9e-13 Score=144.71 Aligned_cols=123 Identities=12% Similarity=0.059 Sum_probs=98.3
Q ss_pred hhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecC---CC
Q 004989 581 EGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS---RS 657 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~---~~ 657 (720)
++..++|...+.+.+..+ .+|.+.|.+|+|+|+|.+|||||.|++|+|||++... ++..+.. ..
T Consensus 219 Dg~v~~wd~~~~~~~~~~-----~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~--------~~~~~~~~~~~~ 285 (354)
T 2pbi_B 219 DKKAMVWDMRSGQCVQAF-----ETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADR--------EVAIYSKESIIF 285 (354)
T ss_dssp TSCEEEEETTTCCEEEEE-----CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE--------EEEEECCTTCCS
T ss_pred CCeEEEEECCCCcEEEEe-----cCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCc--------EEEEEcCCCccc
Confidence 344455555555555444 4568999999999999999999999999999987641 2222222 33
Q ss_pred CEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceEE
Q 004989 658 KLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 658 ~i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
.+++++|+|+ +.+||+|+.|++|+|||+.+|+.+.. |++++|+|.+..+++|+.|...+
T Consensus 286 ~~~~~~~s~~-g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~ 351 (354)
T 2pbi_B 286 GASSVDFSLS-GRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLR 351 (354)
T ss_dssp CEEEEEECTT-SSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEE
T ss_pred ceeEEEEeCC-CCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEE
Confidence 6899999995 56999999999999999999998876 89999999999999999997544
No 278
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.47 E-value=1.3e-13 Score=152.34 Aligned_cols=108 Identities=10% Similarity=0.051 Sum_probs=86.8
Q ss_pred CCCCCeEEEEECC-CCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEE
Q 004989 605 NSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQV 683 (720)
Q Consensus 605 ~~~~~V~sv~f~~-dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~v~l 683 (720)
+|...|+||+|+| ++.+||||+.||+|+|||+.+... ...+....|.+.|++|+|+|.++++|+|||.||+|+|
T Consensus 117 ~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~-----~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~i 191 (435)
T 4e54_B 117 PFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDK-----PTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRL 191 (435)
T ss_dssp ECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSC-----CEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEE
T ss_pred CCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCc-----eeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEE
Confidence 4578899999999 567999999999999999876521 1111223467889999999987889999999999999
Q ss_pred EECCCCcEEEE---------EEEEeecCCceEEEecCccceEE
Q 004989 684 GQVLHLIYFSA---------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 684 WD~~tg~~~~~---------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
||++++..... +.+++|++.+.++++|+.|...+
T Consensus 192 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~ 234 (435)
T 4e54_B 192 QDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVI 234 (435)
T ss_dssp EETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEE
T ss_pred eeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEe
Confidence 99988754332 57899999999999998876443
No 279
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.46 E-value=4.8e-13 Score=140.25 Aligned_cols=122 Identities=11% Similarity=0.151 Sum_probs=98.8
Q ss_pred hhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCE
Q 004989 581 EGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKL 659 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i 659 (720)
++..++|.....+....+ .+|...|.+++|+|||++||+|+.|++|+|||+.+. .++..+. |...|
T Consensus 44 dg~i~iw~~~~~~~~~~~-----~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~--------~~~~~~~~~~~~v 110 (312)
T 4ery_A 44 DKLIKIWGAYDGKFEKTI-----SGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSG--------KCLKTLKGHSNYV 110 (312)
T ss_dssp TSCEEEEETTTCCEEEEE-----CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC--------CEEEEEECCSSCE
T ss_pred CCeEEEEeCCCcccchhh-----ccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCC--------cEEEEEcCCCCCE
Confidence 334455555444444444 456889999999999999999999999999998765 2344443 46779
Q ss_pred EEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceE
Q 004989 660 SSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 660 ~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
.+++|+|+ +++||||+.||+|+|||+++++++.. |.+++|++.+..+.+|+.|...
T Consensus 111 ~~~~~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 173 (312)
T 4ery_A 111 FCCNFNPQ-SNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLC 173 (312)
T ss_dssp EEEEECSS-SSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred EEEEEcCC-CCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcE
Confidence 99999995 56999999999999999999998876 8999999999999999988643
No 280
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.45 E-value=4.4e-13 Score=143.55 Aligned_cols=106 Identities=12% Similarity=0.127 Sum_probs=87.6
Q ss_pred CCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCCcEE
Q 004989 604 LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGVVQ 682 (720)
Q Consensus 604 ~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~w~~~~~~~laS~s~D~~v~ 682 (720)
.+|...|.+|+|+|||++|||||.|++|+|||...... .++..+ .|...|.+|+|+|+ +++||||+.|++|+
T Consensus 58 ~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~------~~~~~~~~h~~~v~~v~~sp~-~~~l~s~s~D~~v~ 130 (345)
T 3fm0_A 58 EGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDF------ECVTTLEGHENEVKSVAWAPS-GNLLATCSRDKSVW 130 (345)
T ss_dssp SSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-E------EEEEEECCCSSCEEEEEECTT-SSEEEEEETTSCEE
T ss_pred cccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCe------EEEEEccCCCCCceEEEEeCC-CCEEEEEECCCeEE
Confidence 47899999999999999999999999999999765411 123334 35678999999995 57999999999999
Q ss_pred EEECCCCcE---EEE-------EEEEeecCCceEEEecCccceE
Q 004989 683 VGQVLHLIY---FSA-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 683 lWD~~tg~~---~~~-------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
|||+.++.. +.. |.+++|+|.+.++++|+.|...
T Consensus 131 iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i 174 (345)
T 3fm0_A 131 VWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTV 174 (345)
T ss_dssp EEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCE
T ss_pred EEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcE
Confidence 999988743 332 8999999999999999988643
No 281
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.45 E-value=2.5e-13 Score=144.47 Aligned_cols=106 Identities=9% Similarity=0.005 Sum_probs=77.6
Q ss_pred CCCCCeEEEEECC---CCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CC---CCEEEEE--------------
Q 004989 605 NSSNLVCSLSFDR---DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SR---SKLSSIC-------------- 663 (720)
Q Consensus 605 ~~~~~V~sv~f~~---dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~---~~i~~l~-------------- 663 (720)
+|+..|+.++|++ ||++|||||.|++|||||+.++. .+..+. ++ ..+.+++
T Consensus 176 ~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk--------~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~ 247 (356)
T 2w18_A 176 LMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQ--------LLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHP 247 (356)
T ss_dssp ECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCC--------EEEEEECCC---CCCEEEEEEETTEEEEEEC--
T ss_pred cCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCc--------EEEEEcCCCcceeeeEEEEECCCCCEEEEeccC
Confidence 4588889999998 77999999999999999998762 111111 00 0111111
Q ss_pred -----------------EecCC-------------C------------CEEEEEeCCCcEEEEECCCCcEEEE-------
Q 004989 664 -----------------WNSYI-------------K------------SQIASSNFEGVVQVGQVLHLIYFSA------- 694 (720)
Q Consensus 664 -----------------w~~~~-------------~------------~~laS~s~D~~v~lWD~~tg~~~~~------- 694 (720)
|++.. + .++||++.||+|||||+.+|+++.+
T Consensus 248 ~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~ 327 (356)
T 2w18_A 248 CAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVKDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQ 327 (356)
T ss_dssp ----------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEETTEEEEEETTSCEEEEETTTCSEEEEECCC--C
T ss_pred CCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccCCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCC
Confidence 44221 1 1579999999999999999999987
Q ss_pred EE-EEeecCCceEEEecCccceEEc
Q 004989 695 LY-CIVLNKLLIIFRYGMFQEVKYL 718 (720)
Q Consensus 695 v~-~v~~~~~~~~~~~~~~~~~~~~ 718 (720)
+. +++|+|.+.++++|+.|.-.++
T Consensus 328 vvs~vafSPDG~~LaSGS~D~TIkl 352 (356)
T 2w18_A 328 HWSFVKWSGTDSHLLAGQKDGNIFV 352 (356)
T ss_dssp CCCEEEECSSSSEEEEECTTSCEEE
T ss_pred eEEEEEECCCCCEEEEEECCCcEEE
Confidence 34 5899999999999999976543
No 282
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.44 E-value=1e-12 Score=143.10 Aligned_cols=115 Identities=10% Similarity=0.121 Sum_probs=95.0
Q ss_pred CCCCCCCCeEEEEECC-CCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCC
Q 004989 602 DLLNSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEG 679 (720)
Q Consensus 602 ~~~~~~~~V~sv~f~~-dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~w~~~~~~~laS~s~D~ 679 (720)
.+.+|.+.|.+++|+| ++.+||||+.|++|+|||+.+.... .....++..+ .|...|.+|+|+|++.++|||++.||
T Consensus 76 ~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~-~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg 154 (402)
T 2aq5_A 76 LVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLV-LPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDN 154 (402)
T ss_dssp CBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCS-SCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTS
T ss_pred eEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCc-cccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCC
Confidence 4668899999999999 9999999999999999998765211 1111244444 45778999999998768999999999
Q ss_pred cEEEEECCCCcEEEE---------EEEEeecCCceEEEecCccceEE
Q 004989 680 VVQVGQVLHLIYFSA---------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 680 ~v~lWD~~tg~~~~~---------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
+|+|||+.+++++.+ |++++|++.+..+++|+.|...+
T Consensus 155 ~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 201 (402)
T 2aq5_A 155 VILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVR 201 (402)
T ss_dssp CEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEE
T ss_pred EEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEE
Confidence 999999999988765 68999999999999999886443
No 283
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.44 E-value=6.8e-13 Score=144.06 Aligned_cols=130 Identities=8% Similarity=0.091 Sum_probs=104.9
Q ss_pred hhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECC-CCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCC
Q 004989 580 LEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRS 657 (720)
Q Consensus 580 ~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~-dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~ 657 (720)
.++..++|...+.+.+..+...-..+|...|.+++|++ ++.+|||||.|++|+|||++... .++..+ .|..
T Consensus 178 ~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~-------~~~~~~~~h~~ 250 (380)
T 3iz6_a 178 GDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITS-------RAVRTYHGHEG 250 (380)
T ss_dssp TTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTC-------CCCEEECCCSS
T ss_pred CCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCC-------cceEEECCcCC
Confidence 45566777777777776665444568899999999987 88999999999999999987431 234444 3577
Q ss_pred CEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE--------------EEEEeecCCceEEEecCccceEE
Q 004989 658 KLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA--------------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 658 ~i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~--------------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
.|.+|+|+|+ +.+||||+.||+|+|||+++|+++.. |++++|++.+..+..|+-|...+
T Consensus 251 ~v~~v~~~p~-~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~ 323 (380)
T 3iz6_a 251 DINSVKFFPD-GQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCY 323 (380)
T ss_dssp CCCEEEECTT-SSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEE
T ss_pred CeEEEEEecC-CCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEE
Confidence 8999999995 56999999999999999999998875 57899999999999998775443
No 284
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.44 E-value=4.4e-13 Score=145.52 Aligned_cols=107 Identities=12% Similarity=0.101 Sum_probs=89.2
Q ss_pred CCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec--------CCCCEEEEEEecCCCCEEE
Q 004989 602 DLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA--------SRSKLSSICWNSYIKSQIA 673 (720)
Q Consensus 602 ~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~--------~~~~i~~l~w~~~~~~~la 673 (720)
.+.+|.+.|.+|+|+|||.+|||||.|++|+|||++++. ++..+. +...|++++|+|+ +.+|+
T Consensus 244 ~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~--------~~~~~~~~~~~~~~~~~~v~~~~~s~~-g~~l~ 314 (380)
T 3iz6_a 244 TYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGH--------QLQVYNREPDRNDNELPIVTSVAFSIS-GRLLF 314 (380)
T ss_dssp EECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTE--------EEEEECCCCSSSCCSSCSCSEEEECSS-SSEEE
T ss_pred EECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCc--------EEEEecccccccccccCceEEEEECCC-CCEEE
Confidence 356789999999999999999999999999999998752 111111 1234899999995 56999
Q ss_pred EEeCCCcEEEEECCCCcEEEE-----------EEEEeecCCceEEEecCccceEE
Q 004989 674 SSNFEGVVQVGQVLHLIYFSA-----------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 674 S~s~D~~v~lWD~~tg~~~~~-----------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
+|+.||+|+|||+.+++.+.. |+|++|+|.+..+++|+.|....
T Consensus 315 ~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~ 369 (380)
T 3iz6_a 315 AGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLK 369 (380)
T ss_dssp EECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEE
T ss_pred EEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEE
Confidence 999999999999999988754 78999999999999999996543
No 285
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.44 E-value=8.3e-13 Score=142.12 Aligned_cols=106 Identities=8% Similarity=0.008 Sum_probs=91.8
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCEEEEEEecC-CCCEEEEEeCCCc
Q 004989 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSY-IKSQIASSNFEGV 680 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~l~w~~~-~~~~laS~s~D~~ 680 (720)
+.+|.+.|.+++|+|++.+|+|||.|++|+|||+.+. .++..+. |...|.+++|+|. .+++||||+.||+
T Consensus 150 ~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~--------~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~ 221 (354)
T 2pbi_B 150 VAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESG--------QLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKK 221 (354)
T ss_dssp EEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTC--------CEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSC
T ss_pred eeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCC--------eEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCe
Confidence 3457899999999999999999999999999998776 2444443 4677999999985 3579999999999
Q ss_pred EEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceE
Q 004989 681 VQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 681 v~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
|++||+++++++.+ |++++|+|.+..+++|+.|...
T Consensus 222 v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v 264 (354)
T 2pbi_B 222 AMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATC 264 (354)
T ss_dssp EEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred EEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeE
Confidence 99999999999876 8999999999999999988643
No 286
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.43 E-value=4.2e-13 Score=145.22 Aligned_cols=109 Identities=6% Similarity=-0.013 Sum_probs=89.1
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCC----cEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeC
Q 004989 603 LLNSSNLVCSLSFDRDGELFAAAGVNK----KIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNF 677 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~----~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~w~~~~~~~laS~s~ 677 (720)
+.+|...|.+|+|+|||.++++|+.|+ +|++||........ .....+ .+...|++|+|+|+ +.+||+|+.
T Consensus 215 ~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~----~~~~~~~~~~~~V~~~~~Spd-g~~lasgs~ 289 (365)
T 4h5i_A 215 DFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSV----LRSKQVTNRFKGITSMDVDMK-GELAVLASN 289 (365)
T ss_dssp CCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEE----EEEEEEESSCSCEEEEEECTT-SCEEEEEET
T ss_pred cCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecc----eeeeeecCCCCCeEeEEECCC-CCceEEEcC
Confidence 345788999999999999999999988 68888865432110 011222 34667999999996 569999999
Q ss_pred CCcEEEEECCCCcEEEE--------EEEEeecCCceEEEecCccceE
Q 004989 678 EGVVQVGQVLHLIYFSA--------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 678 D~~v~lWD~~tg~~~~~--------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
|++|+|||+.+++++.+ |++|+|+|.+.++++||.|.-.
T Consensus 290 D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tv 336 (365)
T 4h5i_A 290 DNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTI 336 (365)
T ss_dssp TSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEE
T ss_pred CCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeE
Confidence 99999999999999886 8999999999999999999754
No 287
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.43 E-value=8.7e-13 Score=138.00 Aligned_cols=111 Identities=19% Similarity=0.161 Sum_probs=89.9
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecC-CCCEEEEEeCCCc
Q 004989 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSY-IKSQIASSNFEGV 680 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~w~~~-~~~~laS~s~D~~ 680 (720)
+.+|.+.|.+|+|+|||++||||+.|++|+|||+.+.... ..++..+ .|...|.+|+|+|. ++++||||+.||+
T Consensus 7 ~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~----~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~ 82 (351)
T 3f3f_A 7 DSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSN----WELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKT 82 (351)
T ss_dssp ECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCC----EEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSC
T ss_pred CcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCc----ceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCe
Confidence 4678999999999999999999999999999998764211 1123333 45778999999995 3679999999999
Q ss_pred EEEEECCCC---------cEEEE-------EEEEeecCC--ceEEEecCccceEE
Q 004989 681 VQVGQVLHL---------IYFSA-------LYCIVLNKL--LIIFRYGMFQEVKY 717 (720)
Q Consensus 681 v~lWD~~tg---------~~~~~-------v~~v~~~~~--~~~~~~~~~~~~~~ 717 (720)
|+|||+.++ +.+.. |++++|++. +..+.+|+.|...+
T Consensus 83 v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~ 137 (351)
T 3f3f_A 83 VKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILR 137 (351)
T ss_dssp EEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEE
T ss_pred EEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEE
Confidence 999999987 44444 899999999 89999988776433
No 288
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.43 E-value=1.6e-12 Score=136.72 Aligned_cols=119 Identities=9% Similarity=0.091 Sum_probs=94.8
Q ss_pred cceEEeeeeccCCCCCCCCCeEEEEECCC-CCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCEEEEEEecC
Q 004989 590 SKLRVKADLNQGDLLNSSNLVCSLSFDRD-GELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSY 667 (720)
Q Consensus 590 ~~~~~~~~l~~~~~~~~~~~V~sv~f~~d-g~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~l~w~~~ 667 (720)
.++++.++| .||.+.|++|+|+|+ +++|||||.|++|+|||+.+.... ...|+..+. |...|++++|+|+
T Consensus 26 ~~~~l~~tL-----~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~---~~~~~~~l~~h~~~V~~~~~s~d 97 (340)
T 4aow_A 26 EQMTLRGTL-----KGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETN---YGIPQRALRGHSHFVSDVVISSD 97 (340)
T ss_dssp CEEEEEEEE-----CCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSC---SEEEEEEECCCSSCEEEEEECTT
T ss_pred CceEEEEEE-----CCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcc---cceeeEEEeCCCCCEEEEEECCC
Confidence 445555555 567999999999998 689999999999999998764211 113444444 4678999999995
Q ss_pred CCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceEE
Q 004989 668 IKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 668 ~~~~laS~s~D~~v~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
+.+|||++.|++|++||...+..... +.++.+++....+++|+.|....
T Consensus 98 -g~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~ 153 (340)
T 4aow_A 98 -GQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIK 153 (340)
T ss_dssp -SSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEE
T ss_pred -CCEEEEEcccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEE
Confidence 56999999999999999999987765 67888999999999988876543
No 289
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.43 E-value=1.2e-12 Score=137.89 Aligned_cols=121 Identities=9% Similarity=0.154 Sum_probs=99.6
Q ss_pred hhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEE
Q 004989 582 GLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSS 661 (720)
Q Consensus 582 ~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~ 661 (720)
...+++...+.+++..+. +|.+.|.+|+|+|||++|||||.|++|+|||+.+. .++..+.+...|.+
T Consensus 195 ~~i~i~d~~~~~~~~~~~-----~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~--------~~~~~~~~~~~v~~ 261 (340)
T 4aow_A 195 KLVKVWNLANCKLKTNHI-----GHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEG--------KHLYTLDGGDIINA 261 (340)
T ss_dssp SCEEEEETTTTEEEEEEC-----CCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTT--------EEEEEEECSSCEEE
T ss_pred CEEEEEECCCCceeeEec-----CCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccC--------ceeeeecCCceEEe
Confidence 345666666667766664 45889999999999999999999999999998875 35666677788999
Q ss_pred EEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE----------------EEEEeecCCceEEEecCccceEE
Q 004989 662 ICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA----------------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 662 l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~----------------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
++|+|+ + .+++++.|++|+|||+.++..+.+ |++++|+|.+..+++|+.|...+
T Consensus 262 ~~~~~~-~-~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~ 331 (340)
T 4aow_A 262 LCFSPN-R-YWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVR 331 (340)
T ss_dssp EEECSS-S-SEEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEE
T ss_pred eecCCC-C-ceeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEE
Confidence 999995 3 455666799999999999877654 79999999999999999987544
No 290
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.42 E-value=3.7e-13 Score=145.71 Aligned_cols=79 Identities=14% Similarity=0.138 Sum_probs=68.0
Q ss_pred CCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe--cCCCCEEEEEEecCCCCEEEEEeCCC
Q 004989 602 DLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM--ASRSKLSSICWNSYIKSQIASSNFEG 679 (720)
Q Consensus 602 ~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~--~~~~~i~~l~w~~~~~~~laS~s~D~ 679 (720)
.+.+|...|.+|+|+|||++||+||.|++|+|||+.++ .++..+ .|...|++|+|||+ +.+|||||.|+
T Consensus 264 ~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~--------~~~~~~~~gH~~~V~~v~fSpd-g~~laS~S~D~ 334 (365)
T 4h5i_A 264 QVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDL--------SMSKIFKQAHSFAITEVTISPD-STYVASVSAAN 334 (365)
T ss_dssp EEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTT--------EEEEEETTSSSSCEEEEEECTT-SCEEEEEETTS
T ss_pred eecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCC--------cEEEEecCcccCCEEEEEECCC-CCEEEEEeCCC
Confidence 45667899999999999999999999999999999876 345443 35778999999996 56999999999
Q ss_pred cEEEEECCCC
Q 004989 680 VVQVGQVLHL 689 (720)
Q Consensus 680 ~v~lWD~~tg 689 (720)
||||||+.++
T Consensus 335 tvrvw~ip~~ 344 (365)
T 4h5i_A 335 TIHIIKLPLN 344 (365)
T ss_dssp EEEEEECCTT
T ss_pred eEEEEEcCCC
Confidence 9999999654
No 291
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.41 E-value=1.9e-12 Score=136.92 Aligned_cols=125 Identities=9% Similarity=0.029 Sum_probs=100.9
Q ss_pred hhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCE
Q 004989 580 LEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKL 659 (720)
Q Consensus 580 ~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i 659 (720)
.++..++|...+.+.+..+. +|...|.+|+|+|++.+|||||.|++|+|||++.. +......|...|
T Consensus 85 ~D~~v~~wd~~~~~~~~~~~-----~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~--------~~~~~~~h~~~v 151 (319)
T 3frx_A 85 WDKTLRLWDVATGETYQRFV-----GHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQ--------CLATLLGHNDWV 151 (319)
T ss_dssp TTSEEEEEETTTTEEEEEEE-----CCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSC--------EEEEECCCSSCE
T ss_pred CCCEEEEEECCCCCeeEEEc-----cCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC--------eEEEEeccCCcE
Confidence 34566777777666666654 56899999999999999999999999999998643 122233457789
Q ss_pred EEEEEecCC-----CCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceEE
Q 004989 660 SSICWNSYI-----KSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 660 ~~l~w~~~~-----~~~laS~s~D~~v~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
.+++|+|.. +.+|+|++.|++|++||+++++...+ |++++|+|.+..+++|+.|...+
T Consensus 152 ~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~ 221 (319)
T 3frx_A 152 SQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIM 221 (319)
T ss_dssp EEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEE
T ss_pred EEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEE
Confidence 999999853 34899999999999999999988765 89999999999999999886443
No 292
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.40 E-value=7.4e-13 Score=142.76 Aligned_cols=129 Identities=12% Similarity=0.043 Sum_probs=101.9
Q ss_pred chhhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCC-EEEEeeCCCcEEEeeCCcccccccccccceEEecCC
Q 004989 578 PFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGE-LFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASR 656 (720)
Q Consensus 578 ~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~-~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~ 656 (720)
...++..++|...+.+++..++ +|...|.+|+|+|+++ +|++++.|++|+|||+++..... .+....+.
T Consensus 157 gs~dg~v~iwd~~~~~~~~~~~-----~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~-----~~~~~~~~ 226 (357)
T 4g56_B 157 GGKDFSVKVWDLSQKAVLKSYN-----AHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPAT-----RIDFCASD 226 (357)
T ss_dssp EETTSCEEEEETTTTEEEEEEC-----CCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBC-----BCCCTTCC
T ss_pred EeCCCeEEEEECCCCcEEEEEc-----CCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceee-----eeeecccc
Confidence 3345566777777777777765 4589999999999986 79999999999999998752110 01111235
Q ss_pred CCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCc-eEEEecCccceE
Q 004989 657 SKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLL-IIFRYGMFQEVK 716 (720)
Q Consensus 657 ~~i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~-------v~~v~~~~~~-~~~~~~~~~~~~ 716 (720)
..|.+|+|+|+.+.+||+|+.|++|+|||+++++++.+ |++++|+|.+ .++++|+.|...
T Consensus 227 ~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i 294 (357)
T 4g56_B 227 TIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTV 294 (357)
T ss_dssp SCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCE
T ss_pred ccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEE
Confidence 67999999998888999999999999999999998876 8999999987 578899887543
No 293
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.40 E-value=1.7e-12 Score=138.65 Aligned_cols=124 Identities=12% Similarity=0.136 Sum_probs=96.6
Q ss_pred hhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe---cCC
Q 004989 580 LEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM---ASR 656 (720)
Q Consensus 580 ~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~---~~~ 656 (720)
.++..++|...+.+.+..+ .+|...|.+|+|+|||++|||||.|++|+|||+.... ..... .+.
T Consensus 96 ~D~~v~lwd~~~~~~~~~~-----~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~--------~~~~~~~~~~~ 162 (343)
T 2xzm_R 96 WDKTLRLWDLRTGTTYKRF-----VGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGEC--------KFSSAEKENHS 162 (343)
T ss_dssp TTSEEEEEETTSSCEEEEE-----ECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCE--------EEECCTTTSCS
T ss_pred CCCcEEEEECCCCcEEEEE-----cCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCc--------eeeeecccCCC
Confidence 4456667776666666555 4568999999999999999999999999999986321 11111 346
Q ss_pred CCEEEEEEecCCC---------CEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceEE
Q 004989 657 SKLSSICWNSYIK---------SQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 657 ~~i~~l~w~~~~~---------~~laS~s~D~~v~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
..|.+++|+|+.. .+|||++.||+|+|||. +++.+.+ |++++|+|.+.++++|+.|...+
T Consensus 163 ~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~ 238 (343)
T 2xzm_R 163 DWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLL 238 (343)
T ss_dssp SCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEE
T ss_pred ceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEE
Confidence 6799999999752 68999999999999994 4555443 89999999999999999886543
No 294
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.40 E-value=2.2e-12 Score=140.61 Aligned_cols=135 Identities=12% Similarity=0.071 Sum_probs=98.7
Q ss_pred hhhhhccccceEEeeeecc--CCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccc-----cccccceEEec
Q 004989 582 GLCKYLSFSKLRVKADLNQ--GDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINEN-----RDIHYPVVEMA 654 (720)
Q Consensus 582 ~l~~~~~~~~~~~~~~l~~--~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~-----~~~~~~~~~~~ 654 (720)
+..++|...+.+++..+.. ....+|...|.+|+|+|||++|||||.|++|+|||+.+..... ....+......
T Consensus 229 ~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~ 308 (393)
T 1erj_A 229 RAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIG 308 (393)
T ss_dssp SCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEEC
T ss_pred CcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEec
Confidence 3455666666666666642 2346789999999999999999999999999999987642110 01112223345
Q ss_pred CCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecC------CceEEEecCccceEE
Q 004989 655 SRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNK------LLIIFRYGMFQEVKY 717 (720)
Q Consensus 655 ~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~-------v~~v~~~~------~~~~~~~~~~~~~~~ 717 (720)
|...|.+++|+|+ +.+||||+.||+|+|||+.+|+++.. |++++|++ .+..+++|+.|....
T Consensus 309 h~~~v~~~~~~~~-~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~ 383 (393)
T 1erj_A 309 HKDFVLSVATTQN-DEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKAR 383 (393)
T ss_dssp CSSCEEEEEECGG-GCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEE
T ss_pred ccCcEEEEEECCC-CCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEEecCCcCcCCCCCEEEEECCCCcEE
Confidence 6778999999995 46999999999999999999998876 88999876 578999999886543
No 295
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.40 E-value=2.8e-12 Score=135.99 Aligned_cols=102 Identities=8% Similarity=0.060 Sum_probs=89.1
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCEEEEEEecCCCCEEEEEeCCCcE
Q 004989 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~l~w~~~~~~~laS~s~D~~v 681 (720)
|.+|.+.|.+|+|+|||++||+|+.|++|+|||+.+. .++..+. |...|.+++|+|+ +++||+++.||+|
T Consensus 28 l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~--------~~~~~~~~h~~~v~~~~~~~~-~~~l~s~~~dg~i 98 (369)
T 3zwl_B 28 LTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNG--------ERLGTLDGHTGTIWSIDVDCF-TKYCVTGSADYSI 98 (369)
T ss_dssp EECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTC--------CEEEEECCCSSCEEEEEECTT-SSEEEEEETTTEE
T ss_pred EEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCc--------hhhhhhhhcCCcEEEEEEcCC-CCEEEEEeCCCeE
Confidence 3467999999999999999999999999999998765 2444444 5778999999995 5799999999999
Q ss_pred EEEECCCCcEEEE------EEEEeecCCceEEEecCcc
Q 004989 682 QVGQVLHLIYFSA------LYCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 682 ~lWD~~tg~~~~~------v~~v~~~~~~~~~~~~~~~ 713 (720)
+|||+.+++++.. +.+++|++.+..+..+..+
T Consensus 99 ~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~ 136 (369)
T 3zwl_B 99 KLWDVSNGQCVATWKSPVPVKRVEFSPCGNYFLAILDN 136 (369)
T ss_dssp EEEETTTCCEEEEEECSSCEEEEEECTTSSEEEEEECC
T ss_pred EEEECCCCcEEEEeecCCCeEEEEEccCCCEEEEecCC
Confidence 9999999999887 7999999999999887765
No 296
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.39 E-value=2.6e-12 Score=148.68 Aligned_cols=107 Identities=11% Similarity=0.095 Sum_probs=90.9
Q ss_pred CCCCCCCCCeEEEEECCCCC-EEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCC
Q 004989 601 GDLLNSSNLVCSLSFDRDGE-LFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFE 678 (720)
Q Consensus 601 ~~~~~~~~~V~sv~f~~dg~-~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~w~~~~~~~laS~s~D 678 (720)
+.+.+|...|.+|+|+|++. +|||||.|++|+|||..+. ..+..+ .|...|.+|+|+|+ +.+||||+.|
T Consensus 141 ~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~--------~~~~~l~~H~~~V~~v~fspd-g~~las~s~D 211 (611)
T 1nr0_A 141 GNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPF--------KFKSTFGEHTKFVHSVRYNPD-GSLFASTGGD 211 (611)
T ss_dssp BCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTB--------EEEEEECCCSSCEEEEEECTT-SSEEEEEETT
T ss_pred ceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCC--------eEeeeeccccCceEEEEECCC-CCEEEEEECC
Confidence 45788999999999999997 5999999999999997654 123333 35678999999996 5699999999
Q ss_pred CcEEEEECCCCcEEEE--------------EEEEeecCCceEEEecCccceE
Q 004989 679 GVVQVGQVLHLIYFSA--------------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 679 ~~v~lWD~~tg~~~~~--------------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
++|+|||+.+|+++.+ |++++|+|.+..+++|+.|...
T Consensus 212 ~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v 263 (611)
T 1nr0_A 212 GTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTI 263 (611)
T ss_dssp SCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred CcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeE
Confidence 9999999999987643 7899999999999999998643
No 297
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.39 E-value=3.3e-12 Score=133.64 Aligned_cols=109 Identities=13% Similarity=0.103 Sum_probs=87.5
Q ss_pred CCCCCCCeEEEEECCC--CCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCC------------
Q 004989 603 LLNSSNLVCSLSFDRD--GELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYI------------ 668 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~d--g~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~------------ 668 (720)
+.+|...|.+|+|+|+ |.+||+|+.|++|+|||++..... .+.....|...|.+++|+|+.
T Consensus 95 ~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~-----~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~ 169 (297)
T 2pm7_B 95 HAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTT-----SPIIIDAHAIGVNSASWAPATIEEDGEHNGTKE 169 (297)
T ss_dssp ECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCB-----CCEEEECCSSCEEEEEECCCC------------
T ss_pred eecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCce-----eeeeeecccCccceEeecCCcccccccCCCCCC
Confidence 3467899999999998 899999999999999998764110 122333457789999999963
Q ss_pred CCEEEEEeCCCcEEEEECCCCc----EEEE-------EEEEeecCCc---eEEEecCccceE
Q 004989 669 KSQIASSNFEGVVQVGQVLHLI----YFSA-------LYCIVLNKLL---IIFRYGMFQEVK 716 (720)
Q Consensus 669 ~~~laS~s~D~~v~lWD~~tg~----~~~~-------v~~v~~~~~~---~~~~~~~~~~~~ 716 (720)
+.+||||+.|++|+|||+++++ .+.+ |++|+|+|.+ .++++|+.|...
T Consensus 170 ~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v 231 (297)
T 2pm7_B 170 SRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTC 231 (297)
T ss_dssp CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCE
T ss_pred cceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcE
Confidence 4699999999999999998876 4433 8999999984 899999988643
No 298
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.38 E-value=1.9e-12 Score=139.35 Aligned_cols=103 Identities=15% Similarity=0.138 Sum_probs=84.5
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCc-EEEeeCCcccccccccccceEEec---CCCCEEEEEEecCCCCEEEEEeCC
Q 004989 603 LLNSSNLVCSLSFDRDGELFAAAGVNKK-IKVFECDAIINENRDIHYPVVEMA---SRSKLSSICWNSYIKSQIASSNFE 678 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~-i~iwd~~~~~~~~~~~~~~~~~~~---~~~~i~~l~w~~~~~~~laS~s~D 678 (720)
+.+|.+.|.+|+|+|||.+|||||.|++ |+|||+.++ .++..+. |...|.+|+|+|+ +.+|||++.|
T Consensus 191 ~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~--------~~~~~~~~g~h~~~v~~~~~s~~-~~~l~s~s~d 261 (355)
T 3vu4_A 191 IKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDG--------VLVREFRRGLDRADVVDMKWSTD-GSKLAVVSDK 261 (355)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTC--------CEEEEEECTTCCSCEEEEEECTT-SCEEEEEETT
T ss_pred EEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCC--------cEEEEEEcCCCCCcEEEEEECCC-CCEEEEEECC
Confidence 4567999999999999999999999999 999999876 2444554 6778999999995 5699999999
Q ss_pred CcEEEEECCCCcEEE--E----------------------------EEEEeecCCceEEEecCccc
Q 004989 679 GVVQVGQVLHLIYFS--A----------------------------LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 679 ~~v~lWD~~tg~~~~--~----------------------------v~~v~~~~~~~~~~~~~~~~ 714 (720)
++|+|||+.++.... . ..+++|++.+..+..|.-|-
T Consensus 262 ~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg 327 (355)
T 3vu4_A 262 WTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTR 327 (355)
T ss_dssp CEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTTT
T ss_pred CEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCC
Confidence 999999998663211 0 15679999999888887765
No 299
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.38 E-value=3.7e-12 Score=134.97 Aligned_cols=108 Identities=10% Similarity=0.158 Sum_probs=90.0
Q ss_pred CCCCCCCeEEEEECCC---CCEEEEeeCCCcEEEeeCCcccccccccccc-eEEecCCCCEEEEEEecCCCCEEEEEeCC
Q 004989 603 LLNSSNLVCSLSFDRD---GELFAAAGVNKKIKVFECDAIINENRDIHYP-VVEMASRSKLSSICWNSYIKSQIASSNFE 678 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~d---g~~lat~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~i~~l~w~~~~~~~laS~s~D 678 (720)
+.+|.+.|.+|+|+|+ |.+||+|+.|++|+|||+.+... .. .....|...|.+++|+|+ +++||+++.|
T Consensus 35 ~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~------~~~~~~~~h~~~v~~~~~~~~-~~~l~s~~~d 107 (368)
T 3mmy_A 35 TSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQ------TIPKAQQMHTGPVLDVCWSDD-GSKVFTASCD 107 (368)
T ss_dssp SSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSC------EEEEEEEECSSCEEEEEECTT-SSEEEEEETT
T ss_pred ccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCc------eeEEEeccccCCEEEEEECcC-CCEEEEEcCC
Confidence 3567999999999999 69999999999999999876211 11 122345778999999994 5699999999
Q ss_pred CcEEEEECCCCcEEEE------EEEEee--cCCceEEEecCccceEE
Q 004989 679 GVVQVGQVLHLIYFSA------LYCIVL--NKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 679 ~~v~lWD~~tg~~~~~------v~~v~~--~~~~~~~~~~~~~~~~~ 717 (720)
|+|+|||+.+++.+.. |++++| ++.+..+.+|+.|...+
T Consensus 108 g~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~ 154 (368)
T 3mmy_A 108 KTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLK 154 (368)
T ss_dssp SEEEEEETTTTEEEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEE
T ss_pred CcEEEEEcCCCCceeeccccCceEEEEEEeCCCCCEEEEccCCCcEE
Confidence 9999999999998875 899999 99999999998886544
No 300
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.37 E-value=3e-12 Score=135.80 Aligned_cols=126 Identities=7% Similarity=-0.021 Sum_probs=101.1
Q ss_pred hhhhccccceEEeeeeccCCCCCCCCCeEEEEECCC----CCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCC
Q 004989 583 LCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRD----GELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRS 657 (720)
Q Consensus 583 l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~d----g~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~ 657 (720)
-.++|...+.+.+..++......|...|.+++|+|+ |.+||+|+.|++|+|||+.+. .++..+. +..
T Consensus 45 ~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~--------~~~~~~~~~~~ 116 (366)
T 3k26_A 45 RVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITM--------QCIKHYVGHGN 116 (366)
T ss_dssp EEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTC--------CEEEEEESCCS
T ss_pred EEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhc--------eEeeeecCCCC
Confidence 345566655555566652222346788999999999 779999999999999998765 2344444 577
Q ss_pred CEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE----------EEEEeecCCceEEEecCccceE
Q 004989 658 KLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA----------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 658 ~i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~----------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
.|.+++|+|.++++||+++.||+|+|||+.+++.+.. |++++|++.+..+.+|+.|...
T Consensus 117 ~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i 185 (366)
T 3k26_A 117 AINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSL 185 (366)
T ss_dssp CEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred cEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCE
Confidence 8999999996678999999999999999999988765 7999999999999999888543
No 301
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.37 E-value=1.9e-12 Score=138.08 Aligned_cols=108 Identities=13% Similarity=0.152 Sum_probs=88.5
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCEEEEEEecC-CCCEEEEEeCCCc
Q 004989 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSY-IKSQIASSNFEGV 680 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~l~w~~~-~~~~laS~s~D~~ 680 (720)
+.+|.+.|.+++|+|||++||+|+.|++|+|||+..... .++..+. |...|++|+|+|+ ++++||||+.||+
T Consensus 7 ~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~------~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~ 80 (379)
T 3jrp_A 7 ANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETH------KLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGK 80 (379)
T ss_dssp EEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEE------EEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSC
T ss_pred ecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcc------eeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCE
Confidence 356799999999999999999999999999999863211 2333443 5678999999874 2679999999999
Q ss_pred EEEEECCCCc--EEEE-------EEEEeecCC--ceEEEecCccceE
Q 004989 681 VQVGQVLHLI--YFSA-------LYCIVLNKL--LIIFRYGMFQEVK 716 (720)
Q Consensus 681 v~lWD~~tg~--~~~~-------v~~v~~~~~--~~~~~~~~~~~~~ 716 (720)
|+|||+.+++ .+.. |++++|++. +..+.+|+.|...
T Consensus 81 v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i 127 (379)
T 3jrp_A 81 VLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKV 127 (379)
T ss_dssp EEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEE
T ss_pred EEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcE
Confidence 9999999997 4443 899999999 8889998887643
No 302
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.37 E-value=2.6e-12 Score=150.74 Aligned_cols=112 Identities=8% Similarity=0.066 Sum_probs=91.6
Q ss_pred CCCCCCCCCeEEEEECCCC-CEEEEeeCCCcEEEeeCCcccccccccccceEE-ecCCCCEEEEEEecCCCCEEEEEeCC
Q 004989 601 GDLLNSSNLVCSLSFDRDG-ELFAAAGVNKKIKVFECDAIINENRDIHYPVVE-MASRSKLSSICWNSYIKSQIASSNFE 678 (720)
Q Consensus 601 ~~~~~~~~~V~sv~f~~dg-~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~i~~l~w~~~~~~~laS~s~D 678 (720)
+.+.+|.+.|.+|+|+|++ ++|||||.|++|+|||+...... ...+... ..|...|.+|+|+|+ +.+||||+.|
T Consensus 376 ~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~---~~~~~~~~~~h~~~v~~v~~s~~-g~~l~sgs~D 451 (694)
T 3dm0_A 376 GTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKA---YGVAQRRLTGHSHFVEDVVLSSD-GQFALSGSWD 451 (694)
T ss_dssp EEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTC---SCEEEEEEECCSSCEEEEEECTT-SSEEEEEETT
T ss_pred hhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcc---cccccceecCCCCcEEEEEECCC-CCEEEEEeCC
Confidence 3456779999999999876 79999999999999998754111 0112223 345778999999995 5699999999
Q ss_pred CcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceE
Q 004989 679 GVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 679 ~~v~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
|+|+|||+.+++++.+ |+|++|++.+..+++|+.|...
T Consensus 452 g~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i 496 (694)
T 3dm0_A 452 GELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTI 496 (694)
T ss_dssp SEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCE
T ss_pred CcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEE
Confidence 9999999999998876 8999999999999999988644
No 303
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.34 E-value=4.4e-12 Score=144.32 Aligned_cols=104 Identities=14% Similarity=0.182 Sum_probs=87.9
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCCcE
Q 004989 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~w~~~~~~~laS~s~D~~v 681 (720)
+.+|...|.+++|+|||++||||+.|++|+|||.... ++..+ .|...|++|+|+|+ +.+|||++.||+|
T Consensus 463 ~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~~~---------~~~~~~~h~~~v~~l~~s~d-g~~l~s~~~dg~v 532 (577)
T 2ymu_A 463 LTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQ---------LLQTLTGHSSSVRGVAFSPD-GQTIASASDDKTV 532 (577)
T ss_dssp EECCSSCEEEEEECTTSCEEEEEETTSEEEEEETTSC---------EEEEEECCSSCEEEEEECTT-SSCEEEEETTSEE
T ss_pred EcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCCCC---------EEEEEeCCCCCEEEEEEcCC-CCEEEEEECcCEE
Confidence 4467899999999999999999999999999995322 33333 45778999999996 4699999999999
Q ss_pred EEEECCCCcEEEE-------EEEEeecCCceEEEecCccceEE
Q 004989 682 QVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 682 ~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
+|||. +|+++.+ |++++|+|.+..+++++-|....
T Consensus 533 ~lwd~-~~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D~~i~ 574 (577)
T 2ymu_A 533 KLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASSDKTVK 574 (577)
T ss_dssp EEECT-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEE
T ss_pred EEEeC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEE
Confidence 99996 7888876 89999999999999999887543
No 304
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.34 E-value=1.2e-12 Score=149.04 Aligned_cols=107 Identities=11% Similarity=0.085 Sum_probs=86.9
Q ss_pred CCCCCCCeEEE--EECCCC-CEEEEeeCCCcEEEeeCCcccccccccccceEEecC-C-CCEEEEEEecCCCCEEEEEeC
Q 004989 603 LLNSSNLVCSL--SFDRDG-ELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS-R-SKLSSICWNSYIKSQIASSNF 677 (720)
Q Consensus 603 ~~~~~~~V~sv--~f~~dg-~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~-~~i~~l~w~~~~~~~laS~s~ 677 (720)
+.+|...|.+| +|+|+| .+|||||.|++|||||+++.. ++.....+ . ..|.+|+|+|++ ..||+++.
T Consensus 304 ~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~-------~~~~~~~~~~~~~v~~v~fsp~~-~~l~s~~~ 375 (524)
T 2j04_B 304 DQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIA-------TTKTTVSRFRGSNLVPVVYCPQI-YSYIYSDG 375 (524)
T ss_dssp EECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHH-------HHCEEEEECSCCSCCCEEEETTT-TEEEEECS
T ss_pred eecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCC-------cccccccccccCcccceEeCCCc-CeEEEeCC
Confidence 34678999999 689998 899999999999999987651 11111122 1 358899999964 58999999
Q ss_pred CCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceEE
Q 004989 678 EGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 678 D~~v~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
|++|+|||+++++++.+ |++|+|+|.+..+++|+.|.--.
T Consensus 376 d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~ 422 (524)
T 2j04_B 376 ASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLI 422 (524)
T ss_dssp SSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEE
T ss_pred CCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECCCEEE
Confidence 99999999999987654 89999999999999999997544
No 305
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.33 E-value=6.8e-12 Score=133.82 Aligned_cols=103 Identities=15% Similarity=-0.018 Sum_probs=85.5
Q ss_pred CCCCCeEEEEECC--CCCEEEEeeCCCcEEEeeCCcccccccccccceEEe--cCCCCEEEEEEecCCCCEEEEEeCCCc
Q 004989 605 NSSNLVCSLSFDR--DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM--ASRSKLSSICWNSYIKSQIASSNFEGV 680 (720)
Q Consensus 605 ~~~~~V~sv~f~~--dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~--~~~~~i~~l~w~~~~~~~laS~s~D~~ 680 (720)
+|...|.+++|+| +|++|||||.|++|+|||+.+.. ++... .+...|.+++|+|+ +.+||+|+.||+
T Consensus 123 ~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~--------~~~~~~~~~~~~i~~~~~~pd-g~~lasg~~dg~ 193 (343)
T 3lrv_A 123 DSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDS--------QYIVHSAKSDVEYSSGVLHKD-SLLLALYSPDGI 193 (343)
T ss_dssp CCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSC--------EEEEECCCSSCCCCEEEECTT-SCEEEEECTTSC
T ss_pred CCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCc--------EEEEEecCCCCceEEEEECCC-CCEEEEEcCCCE
Confidence 4568899999999 99999999999999999988752 22222 23456999999995 569999999999
Q ss_pred EEEEECCCCcEE-EE--------EEEEeecCCceEEEecCccceE
Q 004989 681 VQVGQVLHLIYF-SA--------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 681 v~lWD~~tg~~~-~~--------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
|+|||+++++.+ .+ |++++|+|.+..+.+|+-+.++
T Consensus 194 i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~~~v~ 238 (343)
T 3lrv_A 194 LDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVECDQTVV 238 (343)
T ss_dssp EEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEESSBEE
T ss_pred EEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEeCCeEE
Confidence 999999999877 33 8999999999999999866554
No 306
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.33 E-value=7.3e-12 Score=136.37 Aligned_cols=120 Identities=12% Similarity=0.089 Sum_probs=95.1
Q ss_pred hhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEE
Q 004989 582 GLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLS 660 (720)
Q Consensus 582 ~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~ 660 (720)
+..++|...+.+.+..+ .+|...|.+++|+|||++||||+.|++|+|||+.+.. ++..+ .|...|.
T Consensus 119 g~i~iwd~~~~~~~~~~-----~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~--------~~~~~~~h~~~v~ 185 (420)
T 3vl1_A 119 GDIKVLDSNFNLQREID-----QAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGS--------NPRTLIGHRATVT 185 (420)
T ss_dssp SCEEEECTTSCEEEEET-----TSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC--------CCEEEECCSSCEE
T ss_pred CCEEEEeCCCcceeeec-----ccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCc--------CceEEcCCCCcEE
Confidence 34556666555555554 3568999999999999999999999999999987652 33333 3577899
Q ss_pred EEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEEE----------E---------------------EEeecCCceEEEe
Q 004989 661 SICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSAL----------Y---------------------CIVLNKLLIIFRY 709 (720)
Q Consensus 661 ~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~v----------~---------------------~v~~~~~~~~~~~ 709 (720)
+++|+|+ +.+|||++.||+|+|||+++++++.++ . +++|++.+..+..
T Consensus 186 ~~~~~~~-~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 264 (420)
T 3vl1_A 186 DIAIIDR-GRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIA 264 (420)
T ss_dssp EEEEETT-TTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEE
T ss_pred EEEEcCC-CCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEE
Confidence 9999995 569999999999999999999988763 2 3556788888888
Q ss_pred cCccce
Q 004989 710 GMFQEV 715 (720)
Q Consensus 710 ~~~~~~ 715 (720)
|+-|..
T Consensus 265 ~~~dg~ 270 (420)
T 3vl1_A 265 GHVSGV 270 (420)
T ss_dssp EETTSC
T ss_pred EcCCCe
Confidence 887753
No 307
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.33 E-value=1.1e-11 Score=133.51 Aligned_cols=114 Identities=11% Similarity=0.128 Sum_probs=92.4
Q ss_pred cceEEeeeeccCCCCCCCCCeEEEEECCCC-CEEEEeeCCCcEEEeeCCcccccccccccceEEe---cCCCCEEEEEEe
Q 004989 590 SKLRVKADLNQGDLLNSSNLVCSLSFDRDG-ELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM---ASRSKLSSICWN 665 (720)
Q Consensus 590 ~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg-~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~---~~~~~i~~l~w~ 665 (720)
..+++...+ .+|...|.+++|+|+| .+||+|+.|++|+|||+.+.. ....+ .+...|.+++|+
T Consensus 61 ~~~~~~~~~-----~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~--------~~~~~~~~~h~~~v~~~~~~ 127 (383)
T 3ei3_B 61 KSYKLHRTA-----SPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQN--------KTSFIQGMGPGDAITGMKFN 127 (383)
T ss_dssp TTCEEEEEE-----CCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTT--------CEEEECCCSTTCBEEEEEEE
T ss_pred cccceEEec-----cCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcc--------cceeeecCCcCCceeEEEeC
Confidence 445555555 4568999999999999 999999999999999988652 12222 367889999999
Q ss_pred cCCCCEEEEEeCCCcEEEEECCCCcEEEE----------EEEEeecCCceEEEecCccceEE
Q 004989 666 SYIKSQIASSNFEGVVQVGQVLHLIYFSA----------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 666 ~~~~~~laS~s~D~~v~lWD~~tg~~~~~----------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
|+++++||+++.||+|+|||+.++ .+.. |++++|++.+..+++|+.|-..+
T Consensus 128 ~~~~~~l~s~~~d~~i~iwd~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 188 (383)
T 3ei3_B 128 QFNTNQLFVSSIRGATTLRDFSGS-VIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLL 188 (383)
T ss_dssp TTEEEEEEEEETTTEEEEEETTSC-EEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEE
T ss_pred CCCCCEEEEEeCCCEEEEEECCCC-ceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEE
Confidence 976789999999999999999964 4433 89999999999999998875443
No 308
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.32 E-value=3.4e-12 Score=141.77 Aligned_cols=110 Identities=15% Similarity=0.186 Sum_probs=87.3
Q ss_pred CCCCeEEEEECCCCCEEE----EeeCCCcEEEeeCCcccccccccccce---EEec-CCCCEEEEEEecCCCCEEEEEeC
Q 004989 606 SSNLVCSLSFDRDGELFA----AAGVNKKIKVFECDAIINENRDIHYPV---VEMA-SRSKLSSICWNSYIKSQIASSNF 677 (720)
Q Consensus 606 ~~~~V~sv~f~~dg~~la----t~~~d~~i~iwd~~~~~~~~~~~~~~~---~~~~-~~~~i~~l~w~~~~~~~laS~s~ 677 (720)
+...|.+|+|+|||++|| ||+.|++|+|||+.+..........++ ..+. |...|.+|+|+|+.+++|||++.
T Consensus 91 ~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~ 170 (434)
T 2oit_A 91 MKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLA 170 (434)
T ss_dssp CSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEET
T ss_pred CCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEEC
Confidence 467899999999999999 899999999999865421110000122 2222 46779999999987889999999
Q ss_pred CCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccce
Q 004989 678 EGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 678 D~~v~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
||+|+|||+++++.+.. |+|++|++.+..++.|+.|..
T Consensus 171 Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~ 215 (434)
T 2oit_A 171 DGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGT 215 (434)
T ss_dssp TSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSC
T ss_pred CCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCc
Confidence 99999999999977643 899999999999999998743
No 309
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.32 E-value=5.8e-12 Score=136.62 Aligned_cols=130 Identities=10% Similarity=0.079 Sum_probs=107.8
Q ss_pred hhhhhhccccceEEeeeec-cCCCCCCCCCeEEEEECCCC-CEEEEeeCCC---cEEEeeCCcccccccccccceEEec-
Q 004989 581 EGLCKYLSFSKLRVKADLN-QGDLLNSSNLVCSLSFDRDG-ELFAAAGVNK---KIKVFECDAIINENRDIHYPVVEMA- 654 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~-~~~~~~~~~~V~sv~f~~dg-~~lat~~~d~---~i~iwd~~~~~~~~~~~~~~~~~~~- 654 (720)
++..++|...+.+.+..+. ++...+|...|.+++|+|+| .+||+|+.|+ +|+|||+++.. .++..+.
T Consensus 187 dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~-------~~~~~~~~ 259 (416)
T 2pm9_A 187 SNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNAN-------TPLQTLNQ 259 (416)
T ss_dssp SSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTT-------SCSBCCCS
T ss_pred CCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCC-------CCcEEeec
Confidence 3345677777778888888 56667788999999999998 6899999999 99999998742 2333333
Q ss_pred -CCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCc-eEEEecCccceEE
Q 004989 655 -SRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLL-IIFRYGMFQEVKY 717 (720)
Q Consensus 655 -~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~-------v~~v~~~~~~-~~~~~~~~~~~~~ 717 (720)
|...|.+++|+|.++.+||+++.||+|+|||+.+++++.+ |++++|+|.+ ..+++++.|...+
T Consensus 260 ~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~ 331 (416)
T 2pm9_A 260 GHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIE 331 (416)
T ss_dssp CCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEE
T ss_pred CccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecCCcEE
Confidence 5678999999996678999999999999999999999886 7899999998 8999999986543
No 310
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.32 E-value=8.3e-12 Score=140.83 Aligned_cols=100 Identities=15% Similarity=0.135 Sum_probs=79.9
Q ss_pred CCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCC-----CCEEEEEEecCCCCEEEEEeCCC
Q 004989 605 NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASR-----SKLSSICWNSYIKSQIASSNFEG 679 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~-----~~i~~l~w~~~~~~~laS~s~D~ 679 (720)
+|...|.+|+|+|||++||++|.|++|+|||.... +..+.++ ..|.+|+|||+ +++||+|+.||
T Consensus 83 ~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~~----------l~~l~~~~~~~~~sv~svafSPD-G~~LAsgs~DG 151 (588)
T 2j04_A 83 QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNKM----------LTNLDSKGNLSSRTYHCFEWNPI-ESSIVVGNEDG 151 (588)
T ss_dssp SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTEE----------EEECCCSSCSTTTCEEEEEECSS-SSCEEEEETTS
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCce----------eeeccCCCccccccEEEEEEcCC-CCEEEEEcCCC
Confidence 34789999999999999999999999999995442 1112222 25999999995 56999999999
Q ss_pred cEEEEECCCCcE-------EE-----------EEEEEeecCCceEEEecCccceEE
Q 004989 680 VVQVGQVLHLIY-------FS-----------ALYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 680 ~v~lWD~~tg~~-------~~-----------~v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
+|+|||+.++.. +. .|++|+|+|.+ ++.++.|...+
T Consensus 152 tVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVr 205 (588)
T 2j04_A 152 ELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVF 205 (588)
T ss_dssp EEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEE
T ss_pred EEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEE
Confidence 999999999852 22 39999999999 66777777554
No 311
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.31 E-value=7.9e-12 Score=146.66 Aligned_cols=128 Identities=13% Similarity=0.119 Sum_probs=98.7
Q ss_pred hhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCE
Q 004989 580 LEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKL 659 (720)
Q Consensus 580 ~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i 659 (720)
.++..++|...+.+.+..+ .+|...|.+|+|+|||.+|||||.|++|+|||.......... .....|...|
T Consensus 450 ~Dg~v~vwd~~~~~~~~~~-----~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~----~~~~~h~~~v 520 (694)
T 3dm0_A 450 WDGELRLWDLAAGVSTRRF-----VGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTIS----EGGEGHRDWV 520 (694)
T ss_dssp TTSEEEEEETTTTEEEEEE-----ECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEEC----SSTTSCSSCE
T ss_pred CCCcEEEEECCCCcceeEE-----eCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeec----cCCCCCCCcE
Confidence 3445566666555555544 456899999999999999999999999999997543110000 0001346679
Q ss_pred EEEEEecCC-CCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceE
Q 004989 660 SSICWNSYI-KSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 660 ~~l~w~~~~-~~~laS~s~D~~v~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
+|++|+|+. ...|+||+.||+|+|||+++++++.+ |++++|+|.+..+++|+.|...
T Consensus 521 ~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i 585 (694)
T 3dm0_A 521 SCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVV 585 (694)
T ss_dssp EEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBC
T ss_pred EEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeE
Confidence 999999975 35899999999999999999998876 8999999999999999988643
No 312
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.30 E-value=9.3e-12 Score=150.77 Aligned_cols=101 Identities=16% Similarity=0.166 Sum_probs=87.8
Q ss_pred CCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEE
Q 004989 605 NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVG 684 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~v~lW 684 (720)
+|.+.|.+|+|+|||++||+|+.|++|+|||.... ..+....+...|.+|+|+| + .+|||++.|++|+||
T Consensus 15 gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~--------~~~~~~~~~~~V~~l~fsp-g-~~L~S~s~D~~v~lW 84 (902)
T 2oaj_A 15 GMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQV--------EVVIKLEDRSAIKEMRFVK-G-IYLVVINAKDTVYVL 84 (902)
T ss_dssp ECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTC--------EEEEECSSCCCEEEEEEET-T-TEEEEEETTCEEEEE
T ss_pred CCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCc--------EEEEEcCCCCCEEEEEEcC-C-CEEEEEECcCeEEEE
Confidence 56899999999999999999999999999997654 1223344577899999999 4 499999999999999
Q ss_pred ECCCCcEEEE------EEEEeecCCceEEEecCccce
Q 004989 685 QVLHLIYFSA------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 685 D~~tg~~~~~------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
|+.+++++.+ |+|++|+|.+..+..|+-|-.
T Consensus 85 d~~~~~~~~~~~~~~~V~~v~~sp~g~~l~sgs~dg~ 121 (902)
T 2oaj_A 85 SLYSQKVLTTVFVPGKITSIDTDASLDWMLIGLQNGS 121 (902)
T ss_dssp ETTTCSEEEEEECSSCEEEEECCTTCSEEEEEETTSC
T ss_pred ECCCCcEEEEEcCCCCEEEEEECCCCCEEEEEcCCCc
Confidence 9999998876 899999999999999987754
No 313
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.29 E-value=6.8e-12 Score=134.67 Aligned_cols=108 Identities=7% Similarity=0.080 Sum_probs=80.8
Q ss_pred CCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEE-ecCCCCEEEEEEecCCCCEEEEEeCCCc
Q 004989 602 DLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVE-MASRSKLSSICWNSYIKSQIASSNFEGV 680 (720)
Q Consensus 602 ~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~i~~l~w~~~~~~~laS~s~D~~ 680 (720)
.+.+|.+.|.+++|+|||++||||+.|++|+|||+.+.. ...++.. ..+...|.+++|+|+ +++||+++.|++
T Consensus 50 ~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~-----~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~ 123 (377)
T 3dwl_C 50 TFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDG-----TWKQTLVLLRLNRAATFVRWSPN-EDKFAVGSGARV 123 (377)
T ss_dssp CBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC-----------CCCCEEECCCCSSCEEEEECCTT-SSCCEEEESSSC
T ss_pred EEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCC-----ceeeeeEecccCCceEEEEECCC-CCEEEEEecCCe
Confidence 345679999999999999999999999999999987752 0012333 345778999999995 569999999999
Q ss_pred EEEEECCCCcE---EEE--------EEEEeecCCceEEEecCccce
Q 004989 681 VQVGQVLHLIY---FSA--------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 681 v~lWD~~tg~~---~~~--------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
|+|||+.+++. +.. |++++|+|.+..+++|+.|..
T Consensus 124 i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~ 169 (377)
T 3dwl_C 124 ISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRK 169 (377)
T ss_dssp EEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSC
T ss_pred EEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCE
Confidence 99999998863 332 899999999999999998854
No 314
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.29 E-value=1.4e-11 Score=149.07 Aligned_cols=111 Identities=13% Similarity=0.074 Sum_probs=88.2
Q ss_pred CCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccc----------------------ccccc---------------c
Q 004989 605 NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIIN----------------------ENRDI---------------H 647 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~----------------------~~~~~---------------~ 647 (720)
+|...|.+|+|+|||++||+|+.|++|+|||+.+... ...+. -
T Consensus 486 ~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 565 (902)
T 2oaj_A 486 AKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGF 565 (902)
T ss_dssp SSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEE
T ss_pred CCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCcc
Confidence 7889999999999999999999999999999875410 00000 0
Q ss_pred cceEEec-CCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------------EEEEeec-----CC---ce
Q 004989 648 YPVVEMA-SRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------------LYCIVLN-----KL---LI 705 (720)
Q Consensus 648 ~~~~~~~-~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~-------------v~~v~~~-----~~---~~ 705 (720)
.|+..+. |.+.|++|+|||++ +||+|+.|++|+|||++++..+.. |+||+|+ ++ +.
T Consensus 566 ~~~~~l~~h~~~V~svafSpdG--~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~ 643 (902)
T 2oaj_A 566 MPSTAVHANKGKTSAINNSNIG--FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSI 643 (902)
T ss_dssp EEEEEECCCSCSEEEEEECBTS--EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEE
T ss_pred ceeEEEEcCCCcEEEEEecCCc--EEEEEeCCCcEEEEECCCCeEEEEeehhHhccccccceEEEEEEEEecCCCCCcce
Confidence 1344444 57789999999964 999999999999999998876531 9999999 77 48
Q ss_pred EEEecCccceEE
Q 004989 706 IFRYGMFQEVKY 717 (720)
Q Consensus 706 ~~~~~~~~~~~~ 717 (720)
.+.+|+.|.-.+
T Consensus 644 ~l~sgs~D~tv~ 655 (902)
T 2oaj_A 644 LMVCGTDMGEVI 655 (902)
T ss_dssp EEEEEETTSEEE
T ss_pred EEEEEecCCcEE
Confidence 999999886543
No 315
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.29 E-value=6.3e-12 Score=132.76 Aligned_cols=110 Identities=15% Similarity=0.103 Sum_probs=86.6
Q ss_pred CCCCCCCeEEEEECCC-----------------CCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEE
Q 004989 603 LLNSSNLVCSLSFDRD-----------------GELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICW 664 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~d-----------------g~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~w 664 (720)
+.+|...|.+++|+|+ +++|||||.|++|+|||+..... ..++..+ .|...|.+|+|
T Consensus 146 ~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~-----~~~~~~l~~h~~~V~~v~~ 220 (316)
T 3bg1_A 146 NNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQ-----WKEEQKLEAHSDWVRDVAW 220 (316)
T ss_dssp TTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSC-----EEEEECCBCCSSCEEEEEC
T ss_pred eccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCc-----cceeeecccCCCceEEEEe
Confidence 4567899999999998 47999999999999999854310 0123333 34678999999
Q ss_pred ecCC---CCEEEEEeCCCcEEEEECCCC-------cEEEE----EEEEeecCCceEEEecCccceEE
Q 004989 665 NSYI---KSQIASSNFEGVVQVGQVLHL-------IYFSA----LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 665 ~~~~---~~~laS~s~D~~v~lWD~~tg-------~~~~~----v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
+|++ ..+||||+.||+|+|||+.++ +.+.. |++++|+|.+..+++|+.|..-+
T Consensus 221 sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~ 287 (316)
T 3bg1_A 221 APSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVT 287 (316)
T ss_dssp CCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEE
T ss_pred cCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEE
Confidence 9975 369999999999999999862 23433 89999999999999999886543
No 316
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.28 E-value=6e-12 Score=135.08 Aligned_cols=111 Identities=13% Similarity=0.098 Sum_probs=88.4
Q ss_pred CCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCccccccc----------ccccceEEecCCCCEEEEEEecCCCCEEEEE
Q 004989 606 SSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENR----------DIHYPVVEMASRSKLSSICWNSYIKSQIASS 675 (720)
Q Consensus 606 ~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~----------~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~ 675 (720)
|...|.+++|+|||++||+|+.|++|+|||+.+...... ....++..+.|...|.+++|+|+ +.+||++
T Consensus 145 h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~-~~~l~~~ 223 (377)
T 3dwl_C 145 LRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPS-GNALAYA 223 (377)
T ss_dssp CCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTT-SSCEEEE
T ss_pred cCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCC-CCEEEEE
Confidence 789999999999999999999999999999864211100 01123344456778999999996 4699999
Q ss_pred eCCCcEEEEECCCCcE----EEE-------EEEEeecCCceEEEecCccceEE
Q 004989 676 NFEGVVQVGQVLHLIY----FSA-------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 676 s~D~~v~lWD~~tg~~----~~~-------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
+.||+|+|||+.++++ +.+ |++++|++.+.++.+|+-+.+..
T Consensus 224 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~ 276 (377)
T 3dwl_C 224 GHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPIL 276 (377)
T ss_dssp ETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEEE
T ss_pred eCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEEE
Confidence 9999999999999987 433 89999999999999998777653
No 317
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.28 E-value=4.9e-12 Score=143.90 Aligned_cols=105 Identities=11% Similarity=0.108 Sum_probs=84.6
Q ss_pred CCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEE--EEecCCCCEEEEEeCC
Q 004989 602 DLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSI--CWNSYIKSQIASSNFE 678 (720)
Q Consensus 602 ~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l--~w~~~~~~~laS~s~D 678 (720)
.+.+|...|.||+|++++ +||||+.|++|+|||+++.. .|+..+ .|...|.+| +|+|++.++|||||.|
T Consensus 261 ~l~~h~~~v~sv~~s~~~-~lasgs~DgtV~lWD~~~~~-------~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D 332 (524)
T 2j04_B 261 TLSLADSLITTFDFLSPT-TVVCGFKNGFVAEFDLTDPE-------VPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVD 332 (524)
T ss_dssp EECCTTTCEEEEEESSSS-EEEEEETTSEEEEEETTBCS-------SCSEEEECSSSCEEEEEEECCTTSCCEEEEEETT
T ss_pred EEEcCCCCEEEEEecCCC-eEEEEeCCCEEEEEECCCCC-------CceEEeecccccEEEEEEEcCCCCCeEEEEeccC
Confidence 456788999999999865 89999999999999987641 344433 457789999 4566433799999999
Q ss_pred CcEEEEECCCCcEEEE---------EEEEeecCCceEEEecCccc
Q 004989 679 GVVQVGQVLHLIYFSA---------LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 679 ~~v~lWD~~tg~~~~~---------v~~v~~~~~~~~~~~~~~~~ 714 (720)
|+|||||+++++++.+ |++|+|+|.+..+++++.|.
T Consensus 333 ~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~ 377 (524)
T 2j04_B 333 GYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGAS 377 (524)
T ss_dssp SEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSS
T ss_pred CeEEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCC
Confidence 9999999998875432 57899999988888888775
No 318
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.27 E-value=7.5e-12 Score=138.23 Aligned_cols=102 Identities=8% Similarity=0.079 Sum_probs=85.5
Q ss_pred CCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCCcEEEE
Q 004989 606 SSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGVVQVG 684 (720)
Q Consensus 606 ~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~w~~~~~~~laS~s~D~~v~lW 684 (720)
+...|++++|+|||.+||+|+.|++|+|||++.. ++..+ .|...|.+|+|+|++..+||+|+.|++|+||
T Consensus 208 ~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~---------~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iw 278 (435)
T 4e54_B 208 INIWFCSLDVSASSRMVVTGDNVGNVILLNMDGK---------ELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIW 278 (435)
T ss_dssp CSCCCCCEEEETTTTEEEEECSSSBEEEEESSSC---------BCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEE
T ss_pred CCccEEEEEECCCCCEEEEEeCCCcEeeeccCcc---------eeEEEecccceEEeeeecCCCceEEEEecCcceeeEE
Confidence 3567899999999999999999999999998643 11122 3467899999999888899999999999999
Q ss_pred ECCCCcEEEE----------EEEEeecCCceEEEecCccceE
Q 004989 685 QVLHLIYFSA----------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 685 D~~tg~~~~~----------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
|+++++.... |++++|+|.+..+++|+.|...
T Consensus 279 d~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i 320 (435)
T 4e54_B 279 DLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEI 320 (435)
T ss_dssp ETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCE
T ss_pred ecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEE
Confidence 9988764332 8999999999999999988644
No 319
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.27 E-value=3e-11 Score=130.23 Aligned_cols=104 Identities=10% Similarity=0.118 Sum_probs=88.1
Q ss_pred CCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCCcEEE
Q 004989 605 NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGVVQV 683 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~w~~~~~~~laS~s~D~~v~l 683 (720)
+|...|.+++|+|+|.+||+|+.|++|++||++. .++..+ .|...|.+++|+|++..+||||+.|++|+|
T Consensus 161 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~---------~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~i 231 (383)
T 3ei3_B 161 SWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLDG---------HEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKL 231 (383)
T ss_dssp CSSCCEEEEEEETTTTEEEEEETTSEEEEEETTS---------CEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEE
T ss_pred CCCCCeEEEEECCCCCEEEEECCCCCEEEEECCC---------CEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEE
Confidence 4568899999999999999999999999999842 234443 357789999999976669999999999999
Q ss_pred EECCC----CcEEEE------EEEEeecC-CceEEEecCccceEE
Q 004989 684 GQVLH----LIYFSA------LYCIVLNK-LLIIFRYGMFQEVKY 717 (720)
Q Consensus 684 WD~~t----g~~~~~------v~~v~~~~-~~~~~~~~~~~~~~~ 717 (720)
||+++ ++++.. |++++|++ .+..+++|+.|...+
T Consensus 232 wd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~ 276 (383)
T 3ei3_B 232 WDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIR 276 (383)
T ss_dssp EEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESSSEEE
T ss_pred EeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcCCCcEE
Confidence 99998 677664 89999999 999999999875443
No 320
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.27 E-value=1.8e-11 Score=130.56 Aligned_cols=120 Identities=9% Similarity=-0.051 Sum_probs=89.7
Q ss_pred hhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe--cCCC
Q 004989 580 LEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM--ASRS 657 (720)
Q Consensus 580 ~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~--~~~~ 657 (720)
.++..++|...+.+.+.... .+|...|.+++|+|||.+||+|+.|++|+|||+++... ....+ .|.+
T Consensus 147 ~dg~i~~wd~~~~~~~~~~~----~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~-------~~~~~~~~h~~ 215 (343)
T 3lrv_A 147 NRGTIGFQSYEDDSQYIVHS----AKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQ-------ASSRFPVDEEA 215 (343)
T ss_dssp TTCCEEEEESSSSCEEEEEC----CCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTS-------CCEECCCCTTS
T ss_pred CCCcEEEEECCCCcEEEEEe----cCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCC-------CccEEeccCCC
Confidence 34455666666665544432 12355799999999999999999999999999987621 10222 2577
Q ss_pred CEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE----------EE--EEeecCCceEEEecCc
Q 004989 658 KLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA----------LY--CIVLNKLLIIFRYGMF 712 (720)
Q Consensus 658 ~i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~----------v~--~v~~~~~~~~~~~~~~ 712 (720)
.|++|+|+|+ +.+|||++ |++|+|||+++++++.+ +. +++|+|.+.+++.++-
T Consensus 216 ~v~~l~fs~~-g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~ 280 (343)
T 3lrv_A 216 KIKEVKFADN-GYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSN 280 (343)
T ss_dssp CEEEEEECTT-SSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEET
T ss_pred CEEEEEEeCC-CCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecC
Confidence 8999999995 56999999 56999999999877532 33 5999999999998554
No 321
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.27 E-value=3e-11 Score=130.06 Aligned_cols=112 Identities=13% Similarity=0.190 Sum_probs=86.4
Q ss_pred CCCCCCCeEEEEECC-CCCEEEEeeCCCcEEEeeCCcccccccccccceEEe------cCCCCEEEEEEecCCCCEEEEE
Q 004989 603 LLNSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM------ASRSKLSSICWNSYIKSQIASS 675 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~-dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~------~~~~~i~~l~w~~~~~~~laS~ 675 (720)
+.+|.+.|.+|+|+| +|++||||+.|++|+|||+.+..........+.... .|...|.+++|+|+++.+|+|+
T Consensus 39 ~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~ 118 (408)
T 4a11_B 39 ERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSS 118 (408)
T ss_dssp CCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEE
T ss_pred eeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEE
Confidence 345799999999999 999999999999999999987522111000001111 2577899999999778899999
Q ss_pred eCCCcEEEEECCCCcEEEE------EEEEeecCCce---EEEecCccc
Q 004989 676 NFEGVVQVGQVLHLIYFSA------LYCIVLNKLLI---IFRYGMFQE 714 (720)
Q Consensus 676 s~D~~v~lWD~~tg~~~~~------v~~v~~~~~~~---~~~~~~~~~ 714 (720)
+.||+|++||+.+++.+.. +.++.|++... .+..|..|.
T Consensus 119 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (408)
T 4a11_B 119 SFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGP 166 (408)
T ss_dssp ETTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSS
T ss_pred eCCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCC
Confidence 9999999999999998876 67888887543 677766653
No 322
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.27 E-value=3.9e-11 Score=130.83 Aligned_cols=105 Identities=12% Similarity=0.273 Sum_probs=90.0
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEe--CCC
Q 004989 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSN--FEG 679 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~w~~~~~~~laS~s--~D~ 679 (720)
+.+|...|.+++|+|||.+||+|+.|++|+|||+.+. .++..+ .+...|.+++|+|++..+|++++ .||
T Consensus 213 ~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~--------~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~ 284 (401)
T 4aez_A 213 LQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSS--------IPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDK 284 (401)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCS--------SEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTC
T ss_pred EcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCC--------CccEEecCCcceEEEEEECCCCCCEEEEecCCCCC
Confidence 4457899999999999999999999999999998865 244444 35778999999998888999976 899
Q ss_pred cEEEEECCCCcEEEE------EEEEeecCCceEEEe--cCccce
Q 004989 680 VVQVGQVLHLIYFSA------LYCIVLNKLLIIFRY--GMFQEV 715 (720)
Q Consensus 680 ~v~lWD~~tg~~~~~------v~~v~~~~~~~~~~~--~~~~~~ 715 (720)
+|++||+.+++++.+ +.+++|++.+..+.. |+-|-.
T Consensus 285 ~i~i~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~g~~dg~ 328 (401)
T 4aez_A 285 QIHFWNAATGARVNTVDAGSQVTSLIWSPHSKEIMSTHGFPDNN 328 (401)
T ss_dssp EEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECTTTCE
T ss_pred EEEEEECCCCCEEEEEeCCCcEEEEEECCCCCeEEEEeecCCCc
Confidence 999999999999877 899999999998888 655543
No 323
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.25 E-value=4e-11 Score=130.50 Aligned_cols=104 Identities=16% Similarity=0.164 Sum_probs=87.9
Q ss_pred CCCCCCCeEEEEECCCC-CEEEEeeCCCcEEEeeCCcccccccccccceEEe---cCCCCEEEEEEecCCCCEEEEEeCC
Q 004989 603 LLNSSNLVCSLSFDRDG-ELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM---ASRSKLSSICWNSYIKSQIASSNFE 678 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg-~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~---~~~~~i~~l~w~~~~~~~laS~s~D 678 (720)
+.+|...|.+|+|+|+| .+||||+.|++|+|||+.+. .++..+ .|...|.+++|+|+ +++||+++.|
T Consensus 127 ~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~--------~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d 197 (402)
T 2aq5_A 127 LEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTG--------AAVLTLGPDVHPDTIYSVDWSRD-GALICTSCRD 197 (402)
T ss_dssp EECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTT--------EEEEEECTTTCCSCEEEEEECTT-SSCEEEEETT
T ss_pred ecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCC--------CccEEEecCCCCCceEEEEECCC-CCEEEEEecC
Confidence 45679999999999999 69999999999999998875 234444 35778999999995 5699999999
Q ss_pred CcEEEEECCCCcEEEE---------EEEEeecCCceEEEec---Cccce
Q 004989 679 GVVQVGQVLHLIYFSA---------LYCIVLNKLLIIFRYG---MFQEV 715 (720)
Q Consensus 679 ~~v~lWD~~tg~~~~~---------v~~v~~~~~~~~~~~~---~~~~~ 715 (720)
|+|+|||+++++.+.+ +.++.|++.+.++..| +-|..
T Consensus 198 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~ 246 (402)
T 2aq5_A 198 KRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQ 246 (402)
T ss_dssp SEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEE
T ss_pred CcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCce
Confidence 9999999999998876 4789999999999988 55543
No 324
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.25 E-value=2.8e-11 Score=128.93 Aligned_cols=104 Identities=13% Similarity=0.157 Sum_probs=86.8
Q ss_pred CCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCCcEEEE
Q 004989 606 SSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGVVQVG 684 (720)
Q Consensus 606 ~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~w~~~~~~~laS~s~D~~v~lW 684 (720)
|.+.|.+++|+|||++||+|+.|++|+|||+.+... .++..+ .|...|.+++|+|+ +++||+++.||+|+||
T Consensus 7 ~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~------~~~~~~~~h~~~v~~~~~~~~-~~~l~~~~~dg~i~vw 79 (372)
T 1k8k_C 7 LVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKW------VQVHELKEHNGQVTGVDWAPD-SNRIVTCGTDRNAYVW 79 (372)
T ss_dssp CSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEE------EEEEEEECCSSCEEEEEEETT-TTEEEEEETTSCEEEE
T ss_pred cCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcE------EeeeeecCCCCcccEEEEeCC-CCEEEEEcCCCeEEEE
Confidence 688999999999999999999999999999866410 133344 45778999999995 5799999999999999
Q ss_pred ECCCCcEEEE---------EEEEeecCCceEEEecCccceE
Q 004989 685 QVLHLIYFSA---------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 685 D~~tg~~~~~---------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
|+.+++.... |++++|++.+..+..|+.|...
T Consensus 80 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v 120 (372)
T 1k8k_C 80 TLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVI 120 (372)
T ss_dssp EEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSE
T ss_pred ECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEE
Confidence 9999975443 8999999999999998877543
No 325
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.25 E-value=3.8e-11 Score=142.51 Aligned_cols=104 Identities=10% Similarity=0.019 Sum_probs=90.2
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCEEEEEEecCCCCEEEEEeCCCcE
Q 004989 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~l~w~~~~~~~laS~s~D~~v 681 (720)
+.+|++.|.+++|+|||.+||+|+.|++|+|||+.++ ..+..+. |...|.+++|+|+ +++||+++.||+|
T Consensus 9 ~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~--------~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~dg~i 79 (814)
T 3mkq_A 9 FSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQ--------VEVRSIQVTETPVRAGKFIAR-KNWIIVGSDDFRI 79 (814)
T ss_dssp EEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTT--------EEEEEEECCSSCEEEEEEEGG-GTEEEEEETTSEE
T ss_pred eecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCC--------ceEEEEecCCCcEEEEEEeCC-CCEEEEEeCCCeE
Confidence 3456999999999999999999999999999998775 2333443 5778999999995 5699999999999
Q ss_pred EEEECCCCcEEEE-------EEEEeecCCceEEEecCccce
Q 004989 682 QVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 682 ~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
+|||+.+|+.+.+ |++++|+|.+..+.+|+-|..
T Consensus 80 ~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~ 120 (814)
T 3mkq_A 80 RVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLT 120 (814)
T ss_dssp EEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSE
T ss_pred EEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCE
Confidence 9999999998876 899999999999999888754
No 326
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.24 E-value=2.6e-12 Score=132.43 Aligned_cols=96 Identities=14% Similarity=0.085 Sum_probs=75.4
Q ss_pred hchhhhhhcccCCCCCc--eecccceeecCCCCCcEEEEEecCC--C----CHHHHHhCCCCCCCHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDHLRN--QGGLSGVCENEAAIDPFVHAIEWGD--V----SLRQWLDKPKRSVDVYECLHIFRQIVEIV 134 (720)
Q Consensus 63 r~~~e~~~L~~l~HpnI--V~l~~~~~~~~~~~~~~~lv~E~~g--g----sL~~~L~~~~~~l~~~~~~~i~~QIl~aL 134 (720)
+..+|..+|.++.|++| ..+++ .. ..++||||.| | +|.+++.. .++.++..++.||+.||
T Consensus 116 ~~~~E~~~l~~l~~~~i~~p~~~~----~~----~~~lVmE~~g~~g~~~~~L~~~~~~----~~~~~~~~i~~qi~~~l 183 (258)
T 1zth_A 116 WTEKEFRNLERAKEAGVSVPQPYT----YM----KNVLLMEFIGEDELPAPTLVELGRE----LKELDVEGIFNDVVENV 183 (258)
T ss_dssp HHHHHHHHHHHHHHTTCCCCCEEE----EE----TTEEEEECCEETTEECCBHHHHGGG----GGGSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCCeEEE----cC----CCEEEEEecCCCCCccccHHHHhhc----cChHHHHHHHHHHHHHH
Confidence 34578888998888865 33333 11 3489999953 3 88887632 23557889999999999
Q ss_pred HHHH-HCCceeccCCCCcEEEccCCceEEeecCcccCCC
Q 004989 135 YAAH-SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSG 172 (720)
Q Consensus 135 ~yLH-s~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g 172 (720)
.||| +.|||||||||+|||++. .++|+|||++....
T Consensus 184 ~~lH~~~givHrDlkp~NILl~~--~~~liDFG~a~~~~ 220 (258)
T 1zth_A 184 KRLYQEAELVHADLSEYNIMYID--KVYFIDMGQAVTLR 220 (258)
T ss_dssp HHHHHTSCEECSSCSTTSEEESS--SEEECCCTTCEETT
T ss_pred HHHHHHCCEEeCCCCHHHEEEcC--cEEEEECcccccCC
Confidence 9999 999999999999999988 99999999996543
No 327
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.24 E-value=4e-11 Score=136.89 Aligned_cols=122 Identities=13% Similarity=0.082 Sum_probs=96.6
Q ss_pred hhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec--CCCCEE
Q 004989 583 LCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA--SRSKLS 660 (720)
Q Consensus 583 l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~--~~~~i~ 660 (720)
..+++.....+... ..+.+|...|.+++|+|||++||+|+.|++|+|||+.+.. ++..+. |...|+
T Consensus 468 ~i~~~~~~~~~~~~----~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~--------~~~~~~~~h~~~v~ 535 (615)
T 1pgu_A 468 TIQVFKLSDLEVSF----DLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSRE--------VKTSRWAFRTSKIN 535 (615)
T ss_dssp CEEEEETTEEEEEE----ECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE--------EEECCSCCCSSCEE
T ss_pred eEEEEECCCccccc----cccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCc--------ceeEeecCCCCcee
Confidence 34444444433331 3456678999999999999999999999999999998762 333333 567899
Q ss_pred EEEEecC---------CCCEEEEEeCCCcEEEEECCCC-cEEEE-------EEEEeecCCceEEEecCccceEE
Q 004989 661 SICWNSY---------IKSQIASSNFEGVVQVGQVLHL-IYFSA-------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 661 ~l~w~~~---------~~~~laS~s~D~~v~lWD~~tg-~~~~~-------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
+++|+|. ++.+||+++.||+|+|||+.++ +++.. |++++|++.+. +++++.|...+
T Consensus 536 ~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~l~~s~~~~-l~s~~~d~~v~ 608 (615)
T 1pgu_A 536 AISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPST-LVSSGADACIK 608 (615)
T ss_dssp EEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEETTE-EEEEETTSCEE
T ss_pred EEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCceechhhhcCccceEEEEEcCCCC-eEEecCCceEE
Confidence 9999992 3569999999999999999998 67765 99999999999 99998887543
No 328
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.24 E-value=2.3e-11 Score=132.38 Aligned_cols=99 Identities=10% Similarity=-0.043 Sum_probs=85.6
Q ss_pred CCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCCcEEEEEC
Q 004989 608 NLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGVVQVGQV 686 (720)
Q Consensus 608 ~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~ 686 (720)
.++....|+|||++||+|+.|++|+|||+.+. .++..+ .|...|.+++|+|+ +.+||||+.||+|+|||+
T Consensus 98 ~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~--------~~~~~~~~h~~~v~~~~~~~~-~~~l~s~s~d~~i~iwd~ 168 (420)
T 3vl1_A 98 DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFN--------LQREIDQAHVSEITKLKFFPS-GEALISSSQDMQLKIWSV 168 (420)
T ss_dssp CEEEEEEECSSSCEEEEEETTSCEEEECTTSC--------EEEEETTSSSSCEEEEEECTT-SSEEEEEETTSEEEEEET
T ss_pred CceEEEEEecCCCEEEEEECCCCEEEEeCCCc--------ceeeecccccCccEEEEECCC-CCEEEEEeCCCeEEEEeC
Confidence 66777789999999999999999999998765 233333 45778999999995 569999999999999999
Q ss_pred CCCcEEEE-------EEEEeecCCceEEEecCccce
Q 004989 687 LHLIYFSA-------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 687 ~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
.+++++.+ |++++|++.+..+.+|+.|..
T Consensus 169 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~ 204 (420)
T 3vl1_A 169 KDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGT 204 (420)
T ss_dssp TTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSC
T ss_pred CCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCc
Confidence 99988776 899999999999999998864
No 329
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.22 E-value=6.3e-11 Score=123.70 Aligned_cols=114 Identities=16% Similarity=0.186 Sum_probs=88.1
Q ss_pred CCCCCCeEEEEECCC--CCEEEEeeCCCcEEEeeCCccccccc-------------------------------------
Q 004989 604 LNSSNLVCSLSFDRD--GELFAAAGVNKKIKVFECDAIINENR------------------------------------- 644 (720)
Q Consensus 604 ~~~~~~V~sv~f~~d--g~~lat~~~d~~i~iwd~~~~~~~~~------------------------------------- 644 (720)
.+|...|.+++|+|+ +.+||+|+.|++|+|||+.+......
T Consensus 107 ~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~ 186 (351)
T 3f3f_A 107 NDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLA 186 (351)
T ss_dssp CCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEE
T ss_pred cccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEE
Confidence 356899999999999 99999999999999999875311000
Q ss_pred --------------ccc-cceEEec-CCCCEEEEEEecCCC---CEEEEEeCCCcEEEEECCCC----------------
Q 004989 645 --------------DIH-YPVVEMA-SRSKLSSICWNSYIK---SQIASSNFEGVVQVGQVLHL---------------- 689 (720)
Q Consensus 645 --------------~~~-~~~~~~~-~~~~i~~l~w~~~~~---~~laS~s~D~~v~lWD~~tg---------------- 689 (720)
... .++..+. |...|.+++|+|+++ ++||||+.||+|+|||++++
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 266 (351)
T 3f3f_A 187 VSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMF 266 (351)
T ss_dssp EEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC---------------
T ss_pred EecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceecc
Confidence 000 0133333 467899999999753 69999999999999999876
Q ss_pred ------------------------------cEEEE-------EEEEeecCCceEEEecCccceEE
Q 004989 690 ------------------------------IYFSA-------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 690 ------------------------------~~~~~-------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
+.+.+ |++++|++.+..+++|+.|...+
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~ 331 (351)
T 3f3f_A 267 DNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVR 331 (351)
T ss_dssp ------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETTSCEE
T ss_pred CCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEEEEecCCCcEE
Confidence 44443 89999999999999999886443
No 330
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.22 E-value=2.7e-11 Score=143.77 Aligned_cols=108 Identities=13% Similarity=0.142 Sum_probs=87.4
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCC-CCEEEEEeCCCc
Q 004989 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYI-KSQIASSNFEGV 680 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~w~~~~-~~~laS~s~D~~ 680 (720)
+.+|.+.|.+++|+|||++|||||.|++|+|||+..... .++..+ .|.+.|++++|+|+. +++||||+.||+
T Consensus 5 l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~------~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~ 78 (753)
T 3jro_A 5 ANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETH------KLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGK 78 (753)
T ss_dssp ---CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEE------EEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSC
T ss_pred cccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCC------ccceeccCCcCceEEEEecCCCCCCEEEEEeCCCe
Confidence 567899999999999999999999999999999763211 233334 357789999999852 679999999999
Q ss_pred EEEEECCCCc--EEEE-------EEEEeecCC--ceEEEecCccceE
Q 004989 681 VQVGQVLHLI--YFSA-------LYCIVLNKL--LIIFRYGMFQEVK 716 (720)
Q Consensus 681 v~lWD~~tg~--~~~~-------v~~v~~~~~--~~~~~~~~~~~~~ 716 (720)
|+|||+.+++ .+.. |+|++|+|. +..+.+|+.|...
T Consensus 79 I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I 125 (753)
T 3jro_A 79 VLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKV 125 (753)
T ss_dssp EEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEE
T ss_pred EEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcE
Confidence 9999999997 4443 899999999 8899999887644
No 331
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.22 E-value=5.8e-11 Score=130.13 Aligned_cols=112 Identities=9% Similarity=0.054 Sum_probs=86.4
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccc-cceEEecCCCCEEEEEEecCCCCEEEEEeCCCcE
Q 004989 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIH-YPVVEMASRSKLSSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~v 681 (720)
+.+|...|.+++|+|||++|||| .|++|+|||+.+......... .|.....|...|.+++|+|++.++||+|+.||+|
T Consensus 173 ~~~h~~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i 251 (447)
T 3dw8_B 173 ANAHTYHINSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTI 251 (447)
T ss_dssp CSCCSSCCCEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCE
T ss_pred ccCCCcceEEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeE
Confidence 35789999999999999999998 799999999984311100000 0111124577899999999765899999999999
Q ss_pred EEEECCCCcE----EE-------------------EEEEEeecCCceEEEecCccce
Q 004989 682 QVGQVLHLIY----FS-------------------ALYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 682 ~lWD~~tg~~----~~-------------------~v~~v~~~~~~~~~~~~~~~~~ 715 (720)
+|||+++++. +. .|++++|++.+.++++|+...+
T Consensus 252 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~~~v 308 (447)
T 3dw8_B 252 RLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDYLSV 308 (447)
T ss_dssp EEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEESSEE
T ss_pred EEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeCCeE
Confidence 9999999885 22 4889999999999998877443
No 332
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.22 E-value=4.1e-11 Score=132.20 Aligned_cols=112 Identities=13% Similarity=0.143 Sum_probs=88.3
Q ss_pred CCCCCCeEEEEECCCCC-EEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCCcE
Q 004989 604 LNSSNLVCSLSFDRDGE-LFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 604 ~~~~~~V~sv~f~~dg~-~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~w~~~~~~~laS~s~D~~v 681 (720)
.+|...|++|+|+|++. +||||+.|++|+|||+.+........ .+...+ .|...|.+++|+|.++++|||++.||+|
T Consensus 178 ~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~-~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i 256 (430)
T 2xyi_A 178 RGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVI-DAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKL 256 (430)
T ss_dssp ECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEE-ECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEE
T ss_pred cCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCcee-ccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeE
Confidence 35688999999999999 99999999999999998732111111 123333 4577899999999888899999999999
Q ss_pred EEEECCCC---cEEEE-------EEEEeecCCce-EEEecCccceE
Q 004989 682 QVGQVLHL---IYFSA-------LYCIVLNKLLI-IFRYGMFQEVK 716 (720)
Q Consensus 682 ~lWD~~tg---~~~~~-------v~~v~~~~~~~-~~~~~~~~~~~ 716 (720)
++||++++ +.+.. |+|++|+|.+. ++++|+.|...
T Consensus 257 ~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v 302 (430)
T 2xyi_A 257 MIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTV 302 (430)
T ss_dssp EEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEE
T ss_pred EEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeE
Confidence 99999987 44443 89999999886 68888877543
No 333
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.22 E-value=6.7e-11 Score=147.55 Aligned_cols=103 Identities=16% Similarity=0.261 Sum_probs=88.7
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCEEEEEEecCCCCEEEEEeCCCcE
Q 004989 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~l~w~~~~~~~laS~s~D~~v 681 (720)
+.+|.+.|.+++|+|||++|||||.|++|+|||+.++ .++..+. |...|.+++|+|+ +.+||||+.||+|
T Consensus 611 ~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~--------~~~~~~~~h~~~v~~~~~s~~-~~~l~s~~~d~~v 681 (1249)
T 3sfz_A 611 VRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETG--------EKLLDIKAHEDEVLCCAFSSD-DSYIATCSADKKV 681 (1249)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC--------CEEEEECCCSSCEEEEEECTT-SSEEEEEETTSEE
T ss_pred EecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCC--------CEEEEeccCCCCEEEEEEecC-CCEEEEEeCCCeE
Confidence 4578999999999999999999999999999999876 2344443 4778999999995 5699999999999
Q ss_pred EEEECCCCcEEEE-------EEEEeecC--CceEEEecCccc
Q 004989 682 QVGQVLHLIYFSA-------LYCIVLNK--LLIIFRYGMFQE 714 (720)
Q Consensus 682 ~lWD~~tg~~~~~-------v~~v~~~~--~~~~~~~~~~~~ 714 (720)
+|||+.+|+++.+ |+|++|++ ....+.+|+.|-
T Consensus 682 ~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~ 723 (1249)
T 3sfz_A 682 KIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDF 723 (1249)
T ss_dssp EEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTS
T ss_pred EEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCC
Confidence 9999999999887 89999999 556788887764
No 334
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.21 E-value=5.5e-11 Score=125.23 Aligned_cols=108 Identities=7% Similarity=0.031 Sum_probs=87.8
Q ss_pred CCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCC-EEEEEeCCCcEE
Q 004989 604 LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKS-QIASSNFEGVVQ 682 (720)
Q Consensus 604 ~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~-~laS~s~D~~v~ 682 (720)
.+|.+.|.+++|+|||++||+|+.|++|+|||+.+.... ..+.....+...|.+++|+|+ ++ +|++|+.||+|+
T Consensus 8 ~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~----~~~~~~~~~~~~v~~~~~~~~-~~~~l~~~~~dg~i~ 82 (342)
T 1yfq_A 8 QAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKN----VDLLQSLRYKHPLLCCNFIDN-TDLQIYVGTVQGEIL 82 (342)
T ss_dssp SCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTE----EEEEEEEECSSCEEEEEEEES-SSEEEEEEETTSCEE
T ss_pred cCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCcc----ccceeeeecCCceEEEEECCC-CCcEEEEEcCCCeEE
Confidence 367999999999999999999999999999998765210 012334456788999999995 67 899999999999
Q ss_pred EEEC-CCCcEEE--------EEEEEeecCCceEEEecCccceEE
Q 004989 683 VGQV-LHLIYFS--------ALYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 683 lWD~-~tg~~~~--------~v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
+||+ .+++... .|++++|++ +..+.+++.|...+
T Consensus 83 ~wd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~ 125 (342)
T 1yfq_A 83 KVDLIGSPSFQALTNNEANLGICRICKYG-DDKLIAASWDGLIE 125 (342)
T ss_dssp EECSSSSSSEEECBSCCCCSCEEEEEEET-TTEEEEEETTSEEE
T ss_pred EEEeccCCceEeccccCCCCceEEEEeCC-CCEEEEEcCCCeEE
Confidence 9999 8876532 178999999 99999998886544
No 335
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.21 E-value=1.4e-10 Score=121.41 Aligned_cols=119 Identities=9% Similarity=-0.014 Sum_probs=97.9
Q ss_pred hhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEE
Q 004989 583 LCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSI 662 (720)
Q Consensus 583 l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l 662 (720)
..+++...+.+.+..+.+ ...|.+++|+|+|++||+|+.|++|++||+.+.. ......+...|.++
T Consensus 206 ~i~~~d~~~~~~~~~~~~------~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~--------~~~~~~~~~~v~~~ 271 (337)
T 1gxr_A 206 TVRSWDLREGRQLQQHDF------TSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPD--------KYQLHLHESCVLSL 271 (337)
T ss_dssp EEEEEETTTTEEEEEEEC------SSCEEEEEECTTSSEEEEEETTSCEEEEETTSSC--------EEEECCCSSCEEEE
T ss_pred cEEEEECCCCceEeeecC------CCceEEEEECCCCCEEEEEcCCCcEEEEECCCCC--------eEEEcCCccceeEE
Confidence 445666666666666654 6789999999999999999999999999987652 22333457789999
Q ss_pred EEecCCCCEEEEEeCCCcEEEEECCCCcEEEE------EEEEeecCCceEEEecCccceE
Q 004989 663 CWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 663 ~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
+|+|+ +.+|++++.||+|++||+.+++.+.. +++++|++.+..+.+|+-|...
T Consensus 272 ~~~~~-~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i 330 (337)
T 1gxr_A 272 KFAYC-GKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVTGSGDKKA 330 (337)
T ss_dssp EECTT-SSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEETTSCE
T ss_pred EECCC-CCEEEEecCCCcEEEEECCCCeEEEEecCCCcEEEEEECCCCCEEEEecCCCeE
Confidence 99995 56999999999999999999998865 8999999999999998877543
No 336
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.21 E-value=6.4e-11 Score=147.71 Aligned_cols=123 Identities=8% Similarity=0.037 Sum_probs=101.9
Q ss_pred hhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCC
Q 004989 580 LEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSK 658 (720)
Q Consensus 580 ~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~ 658 (720)
.++..++|...+.+.+.+++ +|.+.|.+++|+|||++|||||.|++|+|||+.++ .++..+ .|...
T Consensus 635 ~d~~i~vw~~~~~~~~~~~~-----~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~--------~~~~~~~~~~~~ 701 (1249)
T 3sfz_A 635 ADKTLQVFKAETGEKLLDIK-----AHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATG--------KLVHTYDEHSEQ 701 (1249)
T ss_dssp TTSCEEEEETTTCCEEEEEC-----CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC--------CEEEEEECCSSC
T ss_pred CCCeEEEEECCCCCEEEEec-----cCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCC--------ceEEEEcCCCCc
Confidence 34455666666666666664 56899999999999999999999999999999876 244444 45778
Q ss_pred EEEEEEecC-CCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccce
Q 004989 659 LSSICWNSY-IKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 659 i~~l~w~~~-~~~~laS~s~D~~v~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
|.+++|+|+ ...+|+||+.||+|++||+.+++++.+ |++++|+|.+..+++|+.|..
T Consensus 702 v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~ 766 (1249)
T 3sfz_A 702 VNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGT 766 (1249)
T ss_dssp EEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSE
T ss_pred EEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCe
Confidence 999999996 345899999999999999999999876 899999999999999988754
No 337
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.21 E-value=4.5e-11 Score=131.21 Aligned_cols=120 Identities=15% Similarity=0.057 Sum_probs=89.9
Q ss_pred ceEEeeeeccCCCCCCCCCeEEEEECC-CCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCC
Q 004989 591 KLRVKADLNQGDLLNSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIK 669 (720)
Q Consensus 591 ~~~~~~~l~~~~~~~~~~~V~sv~f~~-dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~ 669 (720)
+.++++++. .+|.+.|.+|+|+| ||++|||||.|++|+|||+.+..... ...+...+.|...|.+|+|+| ++
T Consensus 51 ~g~~~~~~~----~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~--~~~~~~~~~h~~~v~~~~~~~-~~ 123 (437)
T 3gre_A 51 RGKLIATLM----ENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGE--VYSSSLTYDCSSTVTQITMIP-NF 123 (437)
T ss_dssp CCCEEEEEC----TTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTC--CCSCSEEEECSSCEEEEEECT-TS
T ss_pred cceEEeeec----cCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCc--ccceeeeccCCCCEEEEEEeC-CC
Confidence 345666662 34789999999999 99999999999999999986621111 112344456788999999999 45
Q ss_pred CEEEEEeCCCcEEEEECC---CCcEEEE-----EEEEeec----------------CCceEEEecCccceEE
Q 004989 670 SQIASSNFEGVVQVGQVL---HLIYFSA-----LYCIVLN----------------KLLIIFRYGMFQEVKY 717 (720)
Q Consensus 670 ~~laS~s~D~~v~lWD~~---tg~~~~~-----v~~v~~~----------------~~~~~~~~~~~~~~~~ 717 (720)
++||||+.||+|+|||+. +|+.+.. +.++.|+ +.+..+.+|+.|...+
T Consensus 124 ~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~ 195 (437)
T 3gre_A 124 DAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVI 195 (437)
T ss_dssp SEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEE
T ss_pred CEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEE
Confidence 799999999999999994 7766653 4555544 5688888888775443
No 338
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.21 E-value=8.8e-12 Score=136.05 Aligned_cols=110 Identities=7% Similarity=-0.149 Sum_probs=78.6
Q ss_pred CCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecC-------CCCEEEEEe
Q 004989 605 NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSY-------IKSQIASSN 676 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~w~~~-------~~~~laS~s 676 (720)
+|...+....+++++.+|||||.|++|||||..+.... ...++..+ .|.+.|.+|+|+|. ++++|||||
T Consensus 87 ~~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~---~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s 163 (393)
T 4gq1_A 87 LHDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETII---TQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVG 163 (393)
T ss_dssp ----------CCEEEEEEEEEETTSCEEEEEEETTEEE---EEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEE
T ss_pred ccCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccc---eeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEE
Confidence 45666777778889999999999999999998764110 00122223 35778999999982 457999999
Q ss_pred CCCcEEEEECCCCcEEEE-------EEEEeecCCc-eEEEecCccceEE
Q 004989 677 FEGVVQVGQVLHLIYFSA-------LYCIVLNKLL-IIFRYGMFQEVKY 717 (720)
Q Consensus 677 ~D~~v~lWD~~tg~~~~~-------v~~v~~~~~~-~~~~~~~~~~~~~ 717 (720)
.|++|||||++++.++.. +.+|+|+|.+ ..+++|+.|....
T Consensus 164 ~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~ 212 (393)
T 4gq1_A 164 DDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIR 212 (393)
T ss_dssp TTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEE
T ss_pred CCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEE
Confidence 999999999998887765 8999999987 4899999886543
No 339
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.21 E-value=9.3e-11 Score=124.84 Aligned_cols=125 Identities=14% Similarity=0.063 Sum_probs=95.3
Q ss_pred hhhhhccccceE--EeeeeccCCCCCCCCCeEEEEECCC--CCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCC
Q 004989 582 GLCKYLSFSKLR--VKADLNQGDLLNSSNLVCSLSFDRD--GELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRS 657 (720)
Q Consensus 582 ~l~~~~~~~~~~--~~~~l~~~~~~~~~~~V~sv~f~~d--g~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 657 (720)
+..++|...+.+ .+..+ .+|...|.+++|+|+ |.+|++|+.|++|+|||+..... ..+.....+..
T Consensus 79 g~v~iwd~~~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~-----~~~~~~~~~~~ 148 (379)
T 3jrp_A 79 GKVLIWKEENGRWSQIAVH-----AVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGT-----TSPIIIDAHAI 148 (379)
T ss_dssp SCEEEEEEETTEEEEEEEE-----CCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSC-----CCEEEEECCTT
T ss_pred CEEEEEEcCCCceeEeeee-----cCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCc-----eeeEEecCCCC
Confidence 344555554443 33333 346889999999999 99999999999999999876521 11223334577
Q ss_pred CEEEEEEecC------------CCCEEEEEeCCCcEEEEECCCCcEE----EE-------EEEEeecCC---ceEEEecC
Q 004989 658 KLSSICWNSY------------IKSQIASSNFEGVVQVGQVLHLIYF----SA-------LYCIVLNKL---LIIFRYGM 711 (720)
Q Consensus 658 ~i~~l~w~~~------------~~~~laS~s~D~~v~lWD~~tg~~~----~~-------v~~v~~~~~---~~~~~~~~ 711 (720)
.|.+++|+|. ++.+|++++.||+|+|||+++++.. .. |++++|+|. +..+++|+
T Consensus 149 ~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~ 228 (379)
T 3jrp_A 149 GVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVS 228 (379)
T ss_dssp CEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEE
T ss_pred ceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEe
Confidence 8999999995 4679999999999999999887532 22 889999999 89999998
Q ss_pred ccceE
Q 004989 712 FQEVK 716 (720)
Q Consensus 712 ~~~~~ 716 (720)
.|...
T Consensus 229 ~dg~i 233 (379)
T 3jrp_A 229 QDRTC 233 (379)
T ss_dssp TTSCE
T ss_pred CCCEE
Confidence 88643
No 340
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.20 E-value=1.2e-10 Score=127.86 Aligned_cols=123 Identities=12% Similarity=0.158 Sum_probs=98.7
Q ss_pred hhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCE
Q 004989 581 EGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKL 659 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i 659 (720)
+.-.++|...+.+++..+. +.+|...|+||+|+|||++||||+.|++|+|||+.+. .++..+. |...|
T Consensus 124 d~tV~lWd~~tg~~~~~~~---~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~--------~~~~~~~~h~~~v 192 (420)
T 4gga_A 124 DNSVYLWSASSGDILQLLQ---MEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQ--------KRLRNMTSHSARV 192 (420)
T ss_dssp TTEEEEEETTTCCEEEEEE---CCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTT--------EEEEEECCCSSCE
T ss_pred CCEEEEEECCCCCEEEEEE---ecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCC--------cEEEEEeCCCCce
Confidence 4456777777777766664 3467889999999999999999999999999999876 2344443 46679
Q ss_pred EEEEEecCCCCEEEEEeCCCcEEEEECCCCcEE-EE-------EEEEeecCCceEEEecCccceEE
Q 004989 660 SSICWNSYIKSQIASSNFEGVVQVGQVLHLIYF-SA-------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 660 ~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~-~~-------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
.+++|++ .+|+||+.|++|++||+.+.... .+ +.++.|++.+..+.++.-|...+
T Consensus 193 ~~~s~~~---~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~ 255 (420)
T 4gga_A 193 GSLSWNS---YILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVN 255 (420)
T ss_dssp EEEEEET---TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred EEEeeCC---CEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccce
Confidence 9999986 58999999999999999876543 32 78999999999999998876543
No 341
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.20 E-value=3.8e-11 Score=127.19 Aligned_cols=121 Identities=10% Similarity=0.145 Sum_probs=94.9
Q ss_pred hhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECC-CCCEEEEeeCCCcEEEeeCCcccccccccccceEEe----c
Q 004989 580 LEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM----A 654 (720)
Q Consensus 580 ~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~-dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~----~ 654 (720)
.++..++|...+.+++..++ +|...|.+++|+| ++.+||+|+.|++|+|||+.+. .++..+ .
T Consensus 93 ~dg~i~v~d~~~~~~~~~~~-----~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~--------~~~~~~~~~~~ 159 (366)
T 3k26_A 93 SRGIIRIINPITMQCIKHYV-----GHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTD--------TLVAIFGGVEG 159 (366)
T ss_dssp TTCEEEEECTTTCCEEEEEE-----SCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTT--------EEEEEECSTTS
T ss_pred CCCEEEEEEchhceEeeeec-----CCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecC--------eEEEEeccccc
Confidence 34456667777777777665 4589999999999 9999999999999999998765 233333 3
Q ss_pred CCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEE-----------------------------------EEEEEe
Q 004989 655 SRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFS-----------------------------------ALYCIV 699 (720)
Q Consensus 655 ~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~-----------------------------------~v~~v~ 699 (720)
+...|.+++|+|+ +.+|++++.||+|++||+++++.+. .|.|++
T Consensus 160 ~~~~v~~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 238 (366)
T 3k26_A 160 HRDEVLSADYDLL-GEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVR 238 (366)
T ss_dssp CSSCEEEEEECTT-SSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEE
T ss_pred ccCceeEEEECCC-CCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEE
Confidence 5778999999995 5699999999999999999886431 278899
Q ss_pred ecCCceEEEecCccceE
Q 004989 700 LNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 700 ~~~~~~~~~~~~~~~~~ 716 (720)
|+ +..+.+++.|...
T Consensus 239 ~~--~~~l~~~~~d~~i 253 (366)
T 3k26_A 239 WL--GDLILSKSCENAI 253 (366)
T ss_dssp EE--TTEEEEECSSSEE
T ss_pred Ec--CCEEEEEecCCEE
Confidence 98 5577777766543
No 342
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.20 E-value=1.9e-10 Score=120.36 Aligned_cols=119 Identities=8% Similarity=0.052 Sum_probs=98.4
Q ss_pred hhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEE
Q 004989 583 LCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSI 662 (720)
Q Consensus 583 l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l 662 (720)
...++...+.+++..++ +|...|.+++|+|+|.+|++|+.|++|++||+.+. .++..+.+...|.++
T Consensus 164 ~v~~~d~~~~~~~~~~~-----~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~--------~~~~~~~~~~~v~~~ 230 (337)
T 1gxr_A 164 NIAVWDLHNQTLVRQFQ-----GHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREG--------RQLQQHDFTSQIFSL 230 (337)
T ss_dssp CEEEEETTTTEEEEEEC-----CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT--------EEEEEEECSSCEEEE
T ss_pred cEEEEeCCCCceeeeee-----cccCceEEEEECCCCCEEEEEecCCcEEEEECCCC--------ceEeeecCCCceEEE
Confidence 34555555666666664 35789999999999999999999999999998875 244555667789999
Q ss_pred EEecCCCCEEEEEeCCCcEEEEECCCCcEEEE------EEEEeecCCceEEEecCccce
Q 004989 663 CWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 663 ~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
+|+|+ +.+|++++.|+.|++||+.+++.... +.+++|++.+..+.+++.|..
T Consensus 231 ~~s~~-~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~ 288 (337)
T 1gxr_A 231 GYCPT-GEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNL 288 (337)
T ss_dssp EECTT-SSEEEEEETTSCEEEEETTSSCEEEECCCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred EECCC-CCEEEEEcCCCcEEEEECCCCCeEEEcCCccceeEEEECCCCCEEEEecCCCc
Confidence 99996 56999999999999999999887654 899999999999999887754
No 343
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.20 E-value=1e-10 Score=126.09 Aligned_cols=124 Identities=16% Similarity=0.154 Sum_probs=96.0
Q ss_pred hhhhccccceEEeeeeccCCCCCC---CCCeEEEEECCCCCEEEEeeCC---CcEEEeeCCcccccccccccceEEec--
Q 004989 583 LCKYLSFSKLRVKADLNQGDLLNS---SNLVCSLSFDRDGELFAAAGVN---KKIKVFECDAIINENRDIHYPVVEMA-- 654 (720)
Q Consensus 583 l~~~~~~~~~~~~~~l~~~~~~~~---~~~V~sv~f~~dg~~lat~~~d---~~i~iwd~~~~~~~~~~~~~~~~~~~-- 654 (720)
..+++...+.+++..+.. ..+| ...|.+++|+|+|.+||+|+.| ++|+|||+.+. .++..+.
T Consensus 208 ~i~i~d~~~~~~~~~~~~--~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~--------~~~~~~~~~ 277 (397)
T 1sq9_A 208 TVQISELSTLRPLYNFES--QHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFG--------ERIGSLSVP 277 (397)
T ss_dssp EEEEEETTTTEEEEEEEC--CC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTC--------CEEEEECBC
T ss_pred cEEEEECCCCceeEEEec--cccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCC--------cccceeccC
Confidence 445555555566655542 1236 7899999999999999999999 99999998765 2333332
Q ss_pred ------------CCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE----------------------------
Q 004989 655 ------------SRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA---------------------------- 694 (720)
Q Consensus 655 ------------~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~---------------------------- 694 (720)
+...|.+++|+|+ +.+||+++.||+|+|||+.+++++.+
T Consensus 278 ~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 356 (397)
T 1sq9_A 278 THSSQASLGEFAHSSWVMSLSFNDS-GETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPG 356 (397)
T ss_dssp --------CCBSBSSCEEEEEECSS-SSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCC
T ss_pred cccccccccccccCCcEEEEEECCC-CCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCc
Confidence 5778999999995 56999999999999999999987654
Q ss_pred EEEEeecCCc----------eEEEecCccceEE
Q 004989 695 LYCIVLNKLL----------IIFRYGMFQEVKY 717 (720)
Q Consensus 695 v~~v~~~~~~----------~~~~~~~~~~~~~ 717 (720)
|++++|++.+ ..+++|+.|...+
T Consensus 357 v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~ 389 (397)
T 1sq9_A 357 VFDVKFLKKGWRSGMGADLNESLCCVCLDRSIR 389 (397)
T ss_dssp EEEEEEECTTTSBSTTCTTSCEEEEEETTTEEE
T ss_pred eeEEEeccccccccccccccceEEEecCCCcEE
Confidence 4589999998 7889888886543
No 344
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.20 E-value=9.1e-11 Score=129.41 Aligned_cols=105 Identities=13% Similarity=0.156 Sum_probs=88.5
Q ss_pred CCCCCeEEEEECCCCC-EEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCEEEEEEecCCCCEEEEEeCCCcEE
Q 004989 605 NSSNLVCSLSFDRDGE-LFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEGVVQ 682 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~-~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~l~w~~~~~~~laS~s~D~~v~ 682 (720)
.|...|++|+|+|+|+ +||||+.|++|+|||+++.. .++..+. |...|.+|+|+|++..+|||++.||+|+
T Consensus 275 ~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~-------~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~ 347 (430)
T 2xyi_A 275 AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLK-------LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLH 347 (430)
T ss_dssp CCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTT-------SCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCE
T ss_pred cCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCC-------CCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEE
Confidence 5688999999999998 69999999999999998642 2455554 5778999999998878999999999999
Q ss_pred EEECCC--------------CcEEEE-------EEEEeecCCce-EEEecCccceE
Q 004989 683 VGQVLH--------------LIYFSA-------LYCIVLNKLLI-IFRYGMFQEVK 716 (720)
Q Consensus 683 lWD~~t--------------g~~~~~-------v~~v~~~~~~~-~~~~~~~~~~~ 716 (720)
|||+.+ .+.+.. |++++|++.+. ++++++.|-..
T Consensus 348 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i 403 (430)
T 2xyi_A 348 VWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIM 403 (430)
T ss_dssp EEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEE
T ss_pred EEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCE
Confidence 999987 245543 89999999998 89998887643
No 345
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.20 E-value=4.3e-11 Score=126.52 Aligned_cols=126 Identities=16% Similarity=0.160 Sum_probs=94.0
Q ss_pred hhhhccccceEEeeeeccCCCCCCCCCeEEEEECC---CCCEEEEeeCCCcEEEeeCCcccccccccccce-EEecCCCC
Q 004989 583 LCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDR---DGELFAAAGVNKKIKVFECDAIINENRDIHYPV-VEMASRSK 658 (720)
Q Consensus 583 l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~---dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~-~~~~~~~~ 658 (720)
..+++...+.+.+... .|...|.+++|+| ++.+|++|+.|++|+|||+++..... ..+. ....+...
T Consensus 191 ~i~i~d~~~~~~~~~~------~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~---~~~~~~~~~~~~~ 261 (357)
T 3i2n_A 191 DIKLFDLRNMALRWET------NIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTK---GFASVSEKAHKST 261 (357)
T ss_dssp EEEEEETTTTEEEEEE------ECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTT---EEEEEEEECCSSC
T ss_pred eEEEEECccCceeeec------CCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCccc---ceeeeccCCCcCC
Confidence 4455555555554443 3478899999999 99999999999999999987642110 0111 11245778
Q ss_pred EEEEEEecCCCCEEEEEeCCCcEEEEECCCCc-------------------EEEE-------EEEEeecCCceEEE-ecC
Q 004989 659 LSSICWNSYIKSQIASSNFEGVVQVGQVLHLI-------------------YFSA-------LYCIVLNKLLIIFR-YGM 711 (720)
Q Consensus 659 i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~-------------------~~~~-------v~~v~~~~~~~~~~-~~~ 711 (720)
|.+++|+|++..+||+++.||+|+|||+.++. .+.+ |++++|++.+..++ +|+
T Consensus 262 v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~ 341 (357)
T 3i2n_A 262 VWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSS 341 (357)
T ss_dssp EEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEE
T ss_pred EEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEec
Confidence 99999999765589999999999999998653 3333 89999999999888 899
Q ss_pred ccceEE
Q 004989 712 FQEVKY 717 (720)
Q Consensus 712 ~~~~~~ 717 (720)
.|...+
T Consensus 342 ~d~~i~ 347 (357)
T 3i2n_A 342 FDQTVR 347 (357)
T ss_dssp TTSEEE
T ss_pred CCCcEE
Confidence 886544
No 346
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.18 E-value=1.9e-10 Score=123.61 Aligned_cols=127 Identities=9% Similarity=-0.034 Sum_probs=87.3
Q ss_pred hhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCC-----------------------------------CEEEE--e
Q 004989 583 LCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDG-----------------------------------ELFAA--A 625 (720)
Q Consensus 583 l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg-----------------------------------~~lat--~ 625 (720)
..++|...+.+.+.++.+ ...|.+++|++++ .++|. |
T Consensus 82 ~v~iWd~~~~~~~~~~~~------~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~sg 155 (355)
T 3vu4_A 82 VVHIWDDVKKQDVSRIKV------DAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSNE 155 (355)
T ss_dssp EEEEEETTTTEEEEEEEC------SSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEEES
T ss_pred EEEEEECCCCcEEEEEEC------CCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEccEEEEeCC
Confidence 445666666666666653 3467777777653 23333 5
Q ss_pred eCCCcEEEeeCCcccccccc-------cccc-eEEe-cCCCCEEEEEEecCCCCEEEEEeCCCc-EEEEECCCCcEEEE-
Q 004989 626 GVNKKIKVFECDAIINENRD-------IHYP-VVEM-ASRSKLSSICWNSYIKSQIASSNFEGV-VQVGQVLHLIYFSA- 694 (720)
Q Consensus 626 ~~d~~i~iwd~~~~~~~~~~-------~~~~-~~~~-~~~~~i~~l~w~~~~~~~laS~s~D~~-v~lWD~~tg~~~~~- 694 (720)
+.|++|+|||+.+....... .-.| +..+ .|...|++|+|+|+ +.+||||+.||+ |+|||+++|+++.+
T Consensus 156 ~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~-g~~l~s~s~d~~~v~iwd~~~~~~~~~~ 234 (355)
T 3vu4_A 156 FNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRK-SDMVATCSQDGTIIRVFKTEDGVLVREF 234 (355)
T ss_dssp SCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTT-SSEEEEEETTCSEEEEEETTTCCEEEEE
T ss_pred CcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCC-CCEEEEEeCCCCEEEEEECCCCcEEEEE
Confidence 66777777777653100000 0013 4444 45778999999995 579999999999 99999999998775
Q ss_pred --------EEEEeecCCceEEEecCccceE
Q 004989 695 --------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 695 --------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
|++++|+|.+..+++|+.|...
T Consensus 235 ~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v 264 (355)
T 3vu4_A 235 RRGLDRADVVDMKWSTDGSKLAVVSDKWTL 264 (355)
T ss_dssp ECTTCCSCEEEEEECTTSCEEEEEETTCEE
T ss_pred EcCCCCCcEEEEEECCCCCEEEEEECCCEE
Confidence 7899999999999999998643
No 347
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.18 E-value=2.9e-11 Score=131.13 Aligned_cols=105 Identities=9% Similarity=0.034 Sum_probs=88.1
Q ss_pred CCCCCeEEEEECC-CCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCEEEEEEecCCCCEEEEEeCCCcEE
Q 004989 605 NSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEGVVQ 682 (720)
Q Consensus 605 ~~~~~V~sv~f~~-dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~l~w~~~~~~~laS~s~D~~v~ 682 (720)
+|...|.+++|+| ++.+||+|+.|++|+|||+.+. .++..+. |...|.+++|+|++..+||+++.||+|+
T Consensus 260 ~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~--------~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~ 331 (416)
T 2pm9_A 260 GHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESA--------EQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIE 331 (416)
T ss_dssp CCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSC--------CEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEE
T ss_pred CccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCC--------ccceeecCCCCceEEEEECCCCCCEEEEEecCCcEE
Confidence 6789999999999 9999999999999999998775 2444443 4678999999997768999999999999
Q ss_pred EEECCCCcEE------------------------------------------EEEEEEeecCCceEEEecCccceEE
Q 004989 683 VGQVLHLIYF------------------------------------------SALYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 683 lWD~~tg~~~------------------------------------------~~v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
|||+.+++.. ..+++++|++.+.++++|+.|....
T Consensus 332 iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~la~~~~d~~v~ 408 (416)
T 2pm9_A 332 VQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAFGGKLVQITPDGKGVS 408 (416)
T ss_dssp EEESCCCCCSSCC----------------------CCSCCCSSCCCCCSTTCCCSCCCEEETTTEEECBCTTSSCBC
T ss_pred EEEccCCCCCcccccccccccCCcccccccccccccccccccccccCCccccCCccceEEeeCCeEEEEeCCCCeEE
Confidence 9999877532 1246889999999999999886543
No 348
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.18 E-value=1.2e-10 Score=127.53 Aligned_cols=131 Identities=8% Similarity=0.038 Sum_probs=98.0
Q ss_pred hhhhhhcccc-ceEEeeeec--cCCCCCCCCCeEEEEECCCC-CEEEEeeCCCcEEEeeCCcccccccccccceEEecCC
Q 004989 581 EGLCKYLSFS-KLRVKADLN--QGDLLNSSNLVCSLSFDRDG-ELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASR 656 (720)
Q Consensus 581 ~~l~~~~~~~-~~~~~~~l~--~~~~~~~~~~V~sv~f~~dg-~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~ 656 (720)
++..++|... .-+.+..+. ...+.+|...|.+++|+|+| .+||+|+.|++|+|||+++.... ..++..+.++
T Consensus 197 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~----~~~~~~~~~~ 272 (447)
T 3dw8_B 197 DLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALC----DRHSKLFEEP 272 (447)
T ss_dssp SSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSS----CTTCEEECCC
T ss_pred CCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccc----cceeeEeccC
Confidence 4455666655 333444332 23567889999999999999 99999999999999999875210 0123334332
Q ss_pred -------------CCEEEEEEecCCCCEEEEEeCCCcEEEEECCC-CcEEEEEE----------------------EEee
Q 004989 657 -------------SKLSSICWNSYIKSQIASSNFEGVVQVGQVLH-LIYFSALY----------------------CIVL 700 (720)
Q Consensus 657 -------------~~i~~l~w~~~~~~~laS~s~D~~v~lWD~~t-g~~~~~v~----------------------~v~~ 700 (720)
..|.+++|+|+ +.+||+++. ++|+|||+++ ++++.++. +++|
T Consensus 273 ~~~~~~~~~~~~~~~v~~~~~s~~-g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~ 350 (447)
T 3dw8_B 273 EDPSNRSFFSEIISSISDVKFSHS-GRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCW 350 (447)
T ss_dssp -----CCHHHHHTTCEEEEEECTT-SSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEE
T ss_pred CCccccccccccCceEEEEEECCC-CCEEEEeeC-CeEEEEeCCCCccccceeeccccccccccccccccccccceEEEE
Confidence 28999999995 569999998 9999999997 87776532 2899
Q ss_pred cCCceEEEecCccceEE
Q 004989 701 NKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 701 ~~~~~~~~~~~~~~~~~ 717 (720)
++.+..+++|+.|-..+
T Consensus 351 s~~~~~l~s~s~dg~v~ 367 (447)
T 3dw8_B 351 NGSDSVVMTGSYNNFFR 367 (447)
T ss_dssp CTTSSEEEEECSTTEEE
T ss_pred CCCCCEEEEeccCCEEE
Confidence 99999999999886554
No 349
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.17 E-value=7.5e-11 Score=133.06 Aligned_cols=102 Identities=8% Similarity=0.007 Sum_probs=77.3
Q ss_pred CeEEEEECCCCCEEEEeeCCCcEEEeeCCcccc-cccccccceEEe-----cCCCCEEEEEEecCCCCEEEEEeCCCcEE
Q 004989 609 LVCSLSFDRDGELFAAAGVNKKIKVFECDAIIN-ENRDIHYPVVEM-----ASRSKLSSICWNSYIKSQIASSNFEGVVQ 682 (720)
Q Consensus 609 ~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~-~~~~~~~~~~~~-----~~~~~i~~l~w~~~~~~~laS~s~D~~v~ 682 (720)
.|.+++|||||++||+||.|++|+|||+....- .+.- ..+..+ +|.++|.+|+|+|++ ||+++.|++|+
T Consensus 131 sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~--i~l~ti~~~~~gh~~~V~sVawSPdg---Laass~D~tVr 205 (588)
T 2j04_A 131 TYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEF--YFESSIRLSDAGSKDWVTHIVWYEDV---LVAALSNNSVF 205 (588)
T ss_dssp CEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCC--EEEEEEECSCTTCCCCEEEEEEETTE---EEEEETTCCEE
T ss_pred cEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccc--eeeeeeecccccccccEEEEEEcCCc---EEEEeCCCeEE
Confidence 599999999999999999999999999876520 0000 012232 245689999999964 78888899999
Q ss_pred EEECCCCcE------EE-----EEEEEeecCCceEEEecCccceEE
Q 004989 683 VGQVLHLIY------FS-----ALYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 683 lWD~~tg~~------~~-----~v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
+||+.+++. +. .|++|+|+ +..+++++-.+|+.
T Consensus 206 lWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~~~tIkL 249 (588)
T 2j04_A 206 SMTVSASSHQPVSRMIQNASRRKITDLKIV--DYKVVLTCPGYVHK 249 (588)
T ss_dssp EECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEECSSEEEE
T ss_pred EEECCCCccccceeeecccccCcEEEEEEE--CCEEEEEeCCeEEE
Confidence 999988773 32 18999999 57777777566654
No 350
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.17 E-value=1.9e-10 Score=122.49 Aligned_cols=107 Identities=16% Similarity=0.177 Sum_probs=86.4
Q ss_pred CCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccc----------cccccceEEe-cCCCCEEEEEEecCCCCEE
Q 004989 604 LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINEN----------RDIHYPVVEM-ASRSKLSSICWNSYIKSQI 672 (720)
Q Consensus 604 ~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~----------~~~~~~~~~~-~~~~~i~~l~w~~~~~~~l 672 (720)
.+|...|.+++|+|+|.+||+|+.|++|+|||+....... .....++..+ .+...|.+++|+|+ +.+|
T Consensus 139 ~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l 217 (372)
T 1k8k_C 139 KPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSAN-GSRV 217 (372)
T ss_dssp TTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSS-SSEE
T ss_pred cccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCC-CCEE
Confidence 4568899999999999999999999999999975321000 0112344455 34678999999995 4699
Q ss_pred EEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecC
Q 004989 673 ASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGM 711 (720)
Q Consensus 673 aS~s~D~~v~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~ 711 (720)
++++.||+|++||+.+++++.+ +++++|++.+.++..|+
T Consensus 218 ~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 263 (372)
T 1k8k_C 218 AWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAGH 263 (372)
T ss_dssp EEEETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEET
T ss_pred EEEeCCCEEEEEECCCCceeEEEccCCCCeEEEEEecCCCEEEEEe
Confidence 9999999999999999998876 89999999999988883
No 351
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.17 E-value=1.9e-10 Score=124.31 Aligned_cols=102 Identities=9% Similarity=0.168 Sum_probs=88.4
Q ss_pred CCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCEEEEEEecCCCCEEEEEeCCCcEE
Q 004989 604 LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEGVVQ 682 (720)
Q Consensus 604 ~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~l~w~~~~~~~laS~s~D~~v~ 682 (720)
.+|...|.+++|+|+|++||+|+.|++|+|||+.+. .++..+. +...|.+++|+|++ +|++++.||+|+
T Consensus 244 ~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~--------~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~d~~i~ 313 (425)
T 1r5m_A 244 IGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNG--------NSQNCFYGHSQSIVSASWVGDD--KVISCSMDGSVR 313 (425)
T ss_dssp CCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSB--------SCSEEECCCSSCEEEEEEETTT--EEEEEETTSEEE
T ss_pred ccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCC--------ccceEecCCCccEEEEEECCCC--EEEEEeCCCcEE
Confidence 356889999999999999999999999999998765 2333443 56789999999965 999999999999
Q ss_pred EEECCCCcEEEE-------EEEEeecCCceEEEecCccce
Q 004989 683 VGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 683 lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
+||+.+++.+.. +++++|++.+..++.|+.|-.
T Consensus 314 i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~ 353 (425)
T 1r5m_A 314 LWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQ 353 (425)
T ss_dssp EEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETTSC
T ss_pred EEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECCCe
Confidence 999999998876 889999999999999988753
No 352
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.17 E-value=1.2e-10 Score=123.38 Aligned_cols=95 Identities=12% Similarity=0.196 Sum_probs=78.1
Q ss_pred CCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEE--ecCCCCEEEEEeCCCcE
Q 004989 604 LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICW--NSYIKSQIASSNFEGVV 681 (720)
Q Consensus 604 ~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w--~~~~~~~laS~s~D~~v 681 (720)
.+|...|.+++|+|||++||+|+.|++|+|||+.+. .++....+...|.+++| +|+ +.+|++++.||+|
T Consensus 83 ~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~--------~~~~~~~~~~~v~~~~~~~~~~-~~~l~~~~~dg~i 153 (368)
T 3mmy_A 83 QMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSN--------QAIQIAQHDAPVKTIHWIKAPN-YSCVMTGSWDKTL 153 (368)
T ss_dssp EECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT--------EEEEEEECSSCEEEEEEEECSS-CEEEEEEETTSEE
T ss_pred ccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCC--------CceeeccccCceEEEEEEeCCC-CCEEEEccCCCcE
Confidence 346899999999999999999999999999998876 23445567888999999 774 5689999999999
Q ss_pred EEEECCCCcEEEE------EEEEeecCCceEE
Q 004989 682 QVGQVLHLIYFSA------LYCIVLNKLLIIF 707 (720)
Q Consensus 682 ~lWD~~tg~~~~~------v~~v~~~~~~~~~ 707 (720)
+|||+++++.+.. +.++.+.......
T Consensus 154 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (368)
T 3mmy_A 154 KFWDTRSSNPMMVLQLPERCYCADVIYPMAVV 185 (368)
T ss_dssp EEECSSCSSCSEEEECSSCEEEEEEETTEEEE
T ss_pred EEEECCCCcEEEEEecCCCceEEEecCCeeEE
Confidence 9999999998876 5566666554333
No 353
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.16 E-value=5.7e-11 Score=125.59 Aligned_cols=106 Identities=8% Similarity=0.015 Sum_probs=84.0
Q ss_pred CCCCCeEEEEECCCCC-EEEEeeC---CCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCC--CCEEEEEeCC
Q 004989 605 NSSNLVCSLSFDRDGE-LFAAAGV---NKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYI--KSQIASSNFE 678 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~-~lat~~~---d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~--~~~laS~s~D 678 (720)
+|.+.|.+|+|+|+|. ++|+|+. |++|+|||+.+... .++....+...|.+++|+|+. +.+||+|+.|
T Consensus 16 ~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~------~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d 89 (357)
T 3i2n_A 16 GFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDL------KLLREIEKAKPIKCGTFGATSLQQRYLATGDFG 89 (357)
T ss_dssp ECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSE------EEEEEEEESSCEEEEECTTCCTTTCCEEEEETT
T ss_pred CCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcc------cceeeecccCcEEEEEEcCCCCCCceEEEecCC
Confidence 4789999999999996 5667776 99999999876521 123344667889999999974 6799999999
Q ss_pred CcEEEEECCCCc-EEEE-------EEEE------eecCCceEEEecCccceE
Q 004989 679 GVVQVGQVLHLI-YFSA-------LYCI------VLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 679 ~~v~lWD~~tg~-~~~~-------v~~v------~~~~~~~~~~~~~~~~~~ 716 (720)
|+|++||+.+++ .+.. |+++ +|++.+..+.+|+.|...
T Consensus 90 g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i 141 (357)
T 3i2n_A 90 GNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTV 141 (357)
T ss_dssp SCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCE
T ss_pred CeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeE
Confidence 999999999988 5554 7888 567888899999887543
No 354
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.16 E-value=1e-10 Score=138.72 Aligned_cols=122 Identities=14% Similarity=0.136 Sum_probs=99.4
Q ss_pred hhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCE
Q 004989 581 EGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKL 659 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i 659 (720)
++..++|.+.+.+.+..+. +|.+.|.+++|+|||++||+|+.|++|+|||+.++ .++..+. |...|
T Consensus 34 ~g~v~iwd~~~~~~~~~~~-----~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~--------~~~~~~~~~~~~v 100 (814)
T 3mkq_A 34 SGRVEIWNYETQVEVRSIQ-----VTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTG--------EKVVDFEAHPDYI 100 (814)
T ss_dssp TSEEEEEETTTTEEEEEEE-----CCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTC--------CEEEEEECCSSCE
T ss_pred CCEEEEEECCCCceEEEEe-----cCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCC--------cEEEEEecCCCCE
Confidence 4456677777777777765 45889999999999999999999999999998876 2344443 57789
Q ss_pred EEEEEecCCCCEEEEEeCCCcEEEEECCCC-cEEEE-------EEEEeecC-CceEEEecCccceE
Q 004989 660 SSICWNSYIKSQIASSNFEGVVQVGQVLHL-IYFSA-------LYCIVLNK-LLIIFRYGMFQEVK 716 (720)
Q Consensus 660 ~~l~w~~~~~~~laS~s~D~~v~lWD~~tg-~~~~~-------v~~v~~~~-~~~~~~~~~~~~~~ 716 (720)
.+++|+|+ +.+||+++.||+|+|||+.++ ..... |.|++|+| .+..+.+|+.|...
T Consensus 101 ~~~~~s~~-~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v 165 (814)
T 3mkq_A 101 RSIAVHPT-KPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTV 165 (814)
T ss_dssp EEEEECSS-SSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEE
T ss_pred EEEEEeCC-CCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeE
Confidence 99999995 469999999999999999988 44443 89999999 88899988887643
No 355
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.16 E-value=1.6e-10 Score=127.97 Aligned_cols=100 Identities=14% Similarity=0.167 Sum_probs=82.9
Q ss_pred CCCCCCCCeEEEEECCC---CCEEEEeeCCCcEEEeeCCcccccccccccceEE-e-cCCCCEEEEEEecCCCCEEEEEe
Q 004989 602 DLLNSSNLVCSLSFDRD---GELFAAAGVNKKIKVFECDAIINENRDIHYPVVE-M-ASRSKLSSICWNSYIKSQIASSN 676 (720)
Q Consensus 602 ~~~~~~~~V~sv~f~~d---g~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~-~-~~~~~i~~l~w~~~~~~~laS~s 676 (720)
.+.+|...|.+|+|+|| |++||||+.|++|+|||+.+. .++.. + .|...|.+++|+ ++.+|||++
T Consensus 190 ~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~--------~~~~~~~~~h~~~v~~~~~s--d~~~l~s~~ 259 (450)
T 2vdu_B 190 PILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQC--------FIVDKWLFGHKHFVSSICCG--KDYLLLSAG 259 (450)
T ss_dssp CSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCT--------TCEEEECCCCSSCEEEEEEC--STTEEEEEE
T ss_pred eeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCC--------ceeeeeecCCCCceEEEEEC--CCCEEEEEe
Confidence 34567899999999999 999999999999999998765 22322 3 357789999999 567999999
Q ss_pred CCCcEEEEECCCCcEEEEE--------------------------------EEEeecCCceEEEecC
Q 004989 677 FEGVVQVGQVLHLIYFSAL--------------------------------YCIVLNKLLIIFRYGM 711 (720)
Q Consensus 677 ~D~~v~lWD~~tg~~~~~v--------------------------------~~v~~~~~~~~~~~~~ 711 (720)
.|++|+|||+.+|+++.++ .+++|++.+..+..++
T Consensus 260 ~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~ 326 (450)
T 2vdu_B 260 GDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFV 326 (450)
T ss_dssp SSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEE
T ss_pred CCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEE
Confidence 9999999999999987653 4778888887777765
No 356
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.16 E-value=3.7e-10 Score=119.47 Aligned_cols=120 Identities=8% Similarity=0.045 Sum_probs=97.7
Q ss_pred hhhccccc-eEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEE
Q 004989 584 CKYLSFSK-LRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSI 662 (720)
Q Consensus 584 ~~~~~~~~-~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l 662 (720)
..++...+ .+.+..+. +|...|.+++|+|||.+|++|+.|++|+|||+.+. .++..+.+...+.++
T Consensus 199 i~i~d~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~--------~~~~~~~~~~~~~~~ 265 (369)
T 3zwl_B 199 ISKYDVSNNYEYVDSID-----LHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTL--------QVLKKYETDCPLNTA 265 (369)
T ss_dssp EEEEETTTTTEEEEEEE-----CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC--------CEEEEEECSSCEEEE
T ss_pred EEEEECCCCcEeEEEEe-----cCCCceeEEEECCCCCEEEEecCCceEEEEECCCC--------ceeeeecCCCCceeE
Confidence 34444444 45555554 35789999999999999999999999999998775 345555577889999
Q ss_pred EEecCCCCEEEEEeCCC--------------cEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceEE
Q 004989 663 CWNSYIKSQIASSNFEG--------------VVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 663 ~w~~~~~~~laS~s~D~--------------~v~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
+|+|+ +.+|++++.|+ .|++||+.+++.+.. |++++|+|.+..+++|+.|...+
T Consensus 266 ~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~ 340 (369)
T 3zwl_B 266 VITPL-KEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASGGEDGFIR 340 (369)
T ss_dssp EECSS-SSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred EecCC-CceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCEEEEEcCCCeEE
Confidence 99996 46888888888 899999999998876 89999999999999999886543
No 357
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.15 E-value=3.7e-10 Score=122.95 Aligned_cols=122 Identities=14% Similarity=0.186 Sum_probs=95.4
Q ss_pred hhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCE
Q 004989 581 EGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKL 659 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i 659 (720)
++-.++|...+.+....+.. .|...|.+|+|+|||.+||+|+.|++|+|||+.+. ..+..+ .|...|
T Consensus 112 d~~v~lw~~~~~~~~~~~~~----~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~--------~~~~~~~~~~~~v 179 (401)
T 4aez_A 112 ERNVYVWNADSGSVSALAET----DESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQ--------TKLRTMAGHQARV 179 (401)
T ss_dssp TTEEEEEETTTCCEEEEEEC----CTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTC--------CEEEEECCCSSCE
T ss_pred CCeEEEeeCCCCcEeEeeec----CCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCC--------eEEEEecCCCCce
Confidence 33455566655555555542 26889999999999999999999999999998765 234444 457789
Q ss_pred EEEEEecCCCCEEEEEeCCCcEEEEECCC-CcEEEE-------EEEEeecCCceEEEecCccceEE
Q 004989 660 SSICWNSYIKSQIASSNFEGVVQVGQVLH-LIYFSA-------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 660 ~~l~w~~~~~~~laS~s~D~~v~lWD~~t-g~~~~~-------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
.+++|++ ++|++++.||+|++||+++ +..+.. |.+++|++.+..+++|+.|...+
T Consensus 180 ~~~~~~~---~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~ 242 (401)
T 4aez_A 180 GCLSWNR---HVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQ 242 (401)
T ss_dssp EEEEEET---TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred EEEEECC---CEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEE
Confidence 9999965 5999999999999999994 444444 89999999999999999875443
No 358
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.14 E-value=2.1e-10 Score=123.95 Aligned_cols=106 Identities=10% Similarity=0.099 Sum_probs=80.7
Q ss_pred CCCeEEEEECCCCC-EEEEeeCCCcEEEeeC----CcccccccccccceEEec-----------CCCCEEEEEEecCCCC
Q 004989 607 SNLVCSLSFDRDGE-LFAAAGVNKKIKVFEC----DAIINENRDIHYPVVEMA-----------SRSKLSSICWNSYIKS 670 (720)
Q Consensus 607 ~~~V~sv~f~~dg~-~lat~~~d~~i~iwd~----~~~~~~~~~~~~~~~~~~-----------~~~~i~~l~w~~~~~~ 670 (720)
...|.+++|+|||. +||+|+.|++|+|||+ .++... ... .+...+. +.+.|++++|+|+ ++
T Consensus 45 ~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-~~ 121 (425)
T 1r5m_A 45 LDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKY-WKL-TIIAELRHPFALSASSGKTTNQVTCLAWSHD-GN 121 (425)
T ss_dssp CSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------C-EEE-EEEEEEECCCCCC------CBCEEEEEECTT-SS
T ss_pred cCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCcccc-ccc-cccccccccccccccccCCCCceEEEEEcCC-CC
Confidence 68899999999999 9999999999999998 654200 000 0111111 3458999999995 57
Q ss_pred EEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceE
Q 004989 671 QIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 671 ~laS~s~D~~v~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
+||+++.||+|+||| .+++.+.. |++++|++.+..+.+++.|...
T Consensus 122 ~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 173 (425)
T 1r5m_A 122 SIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVT 173 (425)
T ss_dssp EEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCE
T ss_pred EEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeE
Confidence 999999999999999 67777765 8999999999999988877543
No 359
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.13 E-value=1.7e-10 Score=128.03 Aligned_cols=96 Identities=15% Similarity=0.231 Sum_probs=77.8
Q ss_pred CCCCCCCeEEEEECCC-CCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcE
Q 004989 603 LLNSSNLVCSLSFDRD-GELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~d-g~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~v 681 (720)
+.+|...|.+|+|+|+ +.+||||+.|++|+|||+++.. .......|...|.+++|+|+ +++||+|+.||+|
T Consensus 145 ~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~-------~~~~~~~~~~~v~~v~wspd-g~~lasgs~dg~v 216 (434)
T 2oit_A 145 LKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETV-------KVCATLPSTVAVTSVCWSPK-GKQLAVGKQNGTV 216 (434)
T ss_dssp CCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSE-------EEEEEECGGGCEEEEEECTT-SSCEEEEETTSCE
T ss_pred cCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCc-------ceeeccCCCCceeEEEEcCC-CCEEEEEcCCCcE
Confidence 4567899999999998 7899999999999999987651 12223345678999999996 6799999999999
Q ss_pred EEEECCCCcEEE--------------EEEEEeecCCceEE
Q 004989 682 QVGQVLHLIYFS--------------ALYCIVLNKLLIIF 707 (720)
Q Consensus 682 ~lWD~~tg~~~~--------------~v~~v~~~~~~~~~ 707 (720)
++||++ ++... .|.+++|++....+
T Consensus 217 ~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l 255 (434)
T 2oit_A 217 VQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFA 255 (434)
T ss_dssp EEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEE
T ss_pred EEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEE
Confidence 999998 54433 47889998877666
No 360
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.13 E-value=2.8e-10 Score=117.87 Aligned_cols=97 Identities=14% Similarity=0.053 Sum_probs=82.5
Q ss_pred CCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCEEEEEEecCCCCEEEEEeCCCcEEEE
Q 004989 606 SSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEGVVQVG 684 (720)
Q Consensus 606 ~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~l~w~~~~~~~laS~s~D~~v~lW 684 (720)
|...|.+++|+|+|. |++|+.|++|+|||+.+. .++..+. +...|++++|+|++ .|++++.||+|+||
T Consensus 183 ~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~--------~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~dg~v~iw 251 (313)
T 3odt_A 183 HNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTG--------DVLRTYEGHESFVYCIKLLPNG--DIVSCGEDRTVRIW 251 (313)
T ss_dssp CSSCEEEEEEEETTE-EEEEETTSEEEEEETTTC--------CEEEEEECCSSCEEEEEECTTS--CEEEEETTSEEEEE
T ss_pred CcccEEEEEEcCCCe-EEEccCCCeEEEEECCch--------hhhhhhhcCCceEEEEEEecCC--CEEEEecCCEEEEE
Confidence 688999999999999 999999999999998765 2444443 57789999999965 58999999999999
Q ss_pred ECCCCcEEEE-------EEEEeecCCceEEEecCccc
Q 004989 685 QVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 685 D~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~ 714 (720)
|+.+++.+.. +++++|++.+.++. ++.|-
T Consensus 252 d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~dg 287 (313)
T 3odt_A 252 SKENGSLKQVITLPAISIWSVDCMSNGDIIV-GSSDN 287 (313)
T ss_dssp CTTTCCEEEEEECSSSCEEEEEECTTSCEEE-EETTS
T ss_pred ECCCCceeEEEeccCceEEEEEEccCCCEEE-EeCCC
Confidence 9999998876 89999999988554 55554
No 361
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.12 E-value=3.4e-10 Score=124.15 Aligned_cols=106 Identities=9% Similarity=0.113 Sum_probs=87.2
Q ss_pred CCCCCCCeEEEEECCCCC-EEEE--eeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEE--eC
Q 004989 603 LLNSSNLVCSLSFDRDGE-LFAA--AGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASS--NF 677 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~-~lat--~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~--s~ 677 (720)
...|.+.|.+++|+|++. ++|+ |+.|++|+|||+.++ .++..+.++..+.+++|+|++. .|+++ +.
T Consensus 272 ~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~--------~~~~~~~~~~~v~~~~~~~~~~-~lv~~sg~~ 342 (420)
T 4gga_A 272 FTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSG--------ACLSAVDAHSQVCSILWSPHYK-ELISGHGFA 342 (420)
T ss_dssp ECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTT--------EEEEEEECSSCEEEEEEETTTT-EEEEEECTT
T ss_pred ecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCcc--------ccceeeccccceeeeeecCCCC-eEEEEEecC
Confidence 346789999999999775 5665 457999999999876 3455566677899999999765 45443 37
Q ss_pred CCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceEE
Q 004989 678 EGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 678 D~~v~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
|++|+|||+.+++++.+ |++++|+|.+..+++|+.|+...
T Consensus 343 d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvr 389 (420)
T 4gga_A 343 QNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLR 389 (420)
T ss_dssp TCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEE
T ss_pred CCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEE
Confidence 99999999999999987 89999999999999999998544
No 362
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.12 E-value=6.7e-10 Score=115.41 Aligned_cols=115 Identities=15% Similarity=0.163 Sum_probs=87.4
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCccccccc------c-------------------------------
Q 004989 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENR------D------------------------------- 645 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~------~------------------------------- 645 (720)
+.+|...+.+++|+++|++|+||+.|++|+|||+++...... .
T Consensus 146 ~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~l 225 (318)
T 4ggc_A 146 LSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRI 225 (318)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEE
T ss_pred EcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEE
Confidence 456789999999999999999999999999999875311100 0
Q ss_pred ----cccceEEecCCCCEEEEEEecCCCCEEE-EEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCcc
Q 004989 646 ----IHYPVVEMASRSKLSSICWNSYIKSQIA-SSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 646 ----~~~~~~~~~~~~~i~~l~w~~~~~~~la-S~s~D~~v~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~ 713 (720)
.........+...+.+++|+|.+..+++ +++.|++|+|||+.+++++.+ |+|++|+|.+..+++|+.|
T Consensus 226 wd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D 305 (318)
T 4ggc_A 226 WNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAAD 305 (318)
T ss_dssp EETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETT
T ss_pred EecccccccccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecC
Confidence 0001112233556789999997654333 345799999999999999987 8999999999999999999
Q ss_pred ceEE
Q 004989 714 EVKY 717 (720)
Q Consensus 714 ~~~~ 717 (720)
....
T Consensus 306 ~~v~ 309 (318)
T 4ggc_A 306 ETLR 309 (318)
T ss_dssp TEEE
T ss_pred CeEE
Confidence 7544
No 363
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.12 E-value=3.1e-10 Score=125.51 Aligned_cols=115 Identities=8% Similarity=0.063 Sum_probs=94.2
Q ss_pred hhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCE
Q 004989 581 EGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKL 659 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i 659 (720)
++..+++...+.+.+..+. +|...|.+++|+|+|.+||+|+.|++|+|||+.++ .++..+. |...|
T Consensus 289 d~~i~vwd~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~--------~~~~~~~~h~~~v 355 (464)
T 3v7d_B 289 DNTLIVWDVAQMKCLYILS-----GHTDRIYSTIYDHERKRCISASMDTTIRIWDLENG--------ELMYTLQGHTALV 355 (464)
T ss_dssp TSCEEEEETTTTEEEEEEC-----CCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTT--------EEEEEECCCSSCE
T ss_pred CCeEEEEECCCCcEEEEec-----CCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCC--------cEEEEEeCCCCcE
Confidence 4455666666666666654 46899999999999999999999999999999876 2454543 46789
Q ss_pred EEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE------EEEEeecCCceEEEecC
Q 004989 660 SSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA------LYCIVLNKLLIIFRYGM 711 (720)
Q Consensus 660 ~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~------v~~v~~~~~~~~~~~~~ 711 (720)
.+++|++ .+|+|++.||+|++||+.+++.... +.+++|++.+..++.|+
T Consensus 356 ~~~~~~~---~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 410 (464)
T 3v7d_B 356 GLLRLSD---KFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGS 410 (464)
T ss_dssp EEEEECS---SEEEEEETTSEEEEEETTTCCEEEEEECTTCCCEEEEEECSSEEEEEE
T ss_pred EEEEEcC---CEEEEEeCCCcEEEEECCCCceeeeecCCCCccEEEEEeCCCEEEEec
Confidence 9999984 6999999999999999999987765 56778999999999888
No 364
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.11 E-value=2.6e-10 Score=126.38 Aligned_cols=106 Identities=14% Similarity=0.013 Sum_probs=86.0
Q ss_pred CCCCCCCeEEEEECCCCCEE-EEeeCCCcEEEeeCC--cccccccccccceEEe---cCCCCEEEEEEecCCCCEEEEEe
Q 004989 603 LLNSSNLVCSLSFDRDGELF-AAAGVNKKIKVFECD--AIINENRDIHYPVVEM---ASRSKLSSICWNSYIKSQIASSN 676 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~l-at~~~d~~i~iwd~~--~~~~~~~~~~~~~~~~---~~~~~i~~l~w~~~~~~~laS~s 676 (720)
+.+|.+.|.+++|+|||++| |+|+.|++|+|||+. +. .++..+ .+...|.+|+|+|+ +.+||+|+
T Consensus 98 ~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~--------~~~~~~~~~~~~~~v~~~~~sp~-~~~l~~~~ 168 (450)
T 2vdu_B 98 APPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSK--------NVLKLRKRFCFSKRPNAISIAED-DTTVIIAD 168 (450)
T ss_dssp --CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSS--------SCEEEEEEEECSSCEEEEEECTT-SSEEEEEE
T ss_pred CCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCC--------ceeeeeecccCCCCceEEEEcCC-CCEEEEEe
Confidence 45678899999999999995 999999999999987 43 123333 34678999999995 46999999
Q ss_pred CCCcEEEEECCCCcEEE----E-------EEEEeecCC---ceEEEecCccceEE
Q 004989 677 FEGVVQVGQVLHLIYFS----A-------LYCIVLNKL---LIIFRYGMFQEVKY 717 (720)
Q Consensus 677 ~D~~v~lWD~~tg~~~~----~-------v~~v~~~~~---~~~~~~~~~~~~~~ 717 (720)
.||.|.+||+.+++... . |+|++|+|. +..+++|+.|...+
T Consensus 169 ~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~ 223 (450)
T 2vdu_B 169 KFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIK 223 (450)
T ss_dssp TTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEE
T ss_pred CCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEE
Confidence 99999999998887542 1 999999999 99999999885443
No 365
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.10 E-value=6.5e-10 Score=115.07 Aligned_cols=110 Identities=12% Similarity=0.153 Sum_probs=83.1
Q ss_pred cceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCC
Q 004989 590 SKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIK 669 (720)
Q Consensus 590 ~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~ 669 (720)
..++++.+++ +|.+.|.+|+| |+|.+||||+.|++|+|||+.+.. .......+...|.+++|+|+ +
T Consensus 6 ~~~~~~~~l~-----~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~-------~~~~~~~~~~~v~~~~~~~~-~ 71 (313)
T 3odt_A 6 TGYQLSATLK-----GHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQW-------LGTVVYTGQGFLNSVCYDSE-K 71 (313)
T ss_dssp CCCEEEEEEC-----CCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSE-------EEEEEEECSSCEEEEEEETT-T
T ss_pred ccHHHHHHhh-----CCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCE-------EEEEeecCCccEEEEEECCC-C
Confidence 3455666664 46899999999 999999999999999999986541 11222345778999999995 5
Q ss_pred CEEEEEeCCCcEEEEECCCC---cEEEE-------EEEEeecCCceEEEecCccce
Q 004989 670 SQIASSNFEGVVQVGQVLHL---IYFSA-------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 670 ~~laS~s~D~~v~lWD~~tg---~~~~~-------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
.+||+++.||+|++||+... +.+.. |++++|+ ...+.+|+.|..
T Consensus 72 ~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~d~~ 125 (313)
T 3odt_A 72 ELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSFQ--DGVVISGSWDKT 125 (313)
T ss_dssp TEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEEE--TTEEEEEETTSE
T ss_pred CEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEec--CCEEEEEeCCCC
Confidence 69999999999999998754 33333 8899994 446666666543
No 366
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.10 E-value=5.8e-10 Score=122.34 Aligned_cols=102 Identities=11% Similarity=0.200 Sum_probs=85.2
Q ss_pred CCCCeEEEE--ECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec---CCCCEEEEEEecCCCCEEEEEeCCCc
Q 004989 606 SSNLVCSLS--FDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA---SRSKLSSICWNSYIKSQIASSNFEGV 680 (720)
Q Consensus 606 ~~~~V~sv~--f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~---~~~~i~~l~w~~~~~~~laS~s~D~~ 680 (720)
+...+.+++ |++|+.+||+|+.|++|+|||+++. .++..+. |...|++++|+|+ +.+||+|+.||+
T Consensus 167 ~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~--------~~~~~~~~~~h~~~v~~~~~s~~-~~~l~s~~~dg~ 237 (437)
T 3gre_A 167 KNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTL--------ERLQIIENSPRHGAVSSICIDEE-CCVLILGTTRGI 237 (437)
T ss_dssp SCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTC--------CEEEEEECCGGGCCEEEEEECTT-SCEEEEEETTSC
T ss_pred cccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC--------eeeEEEccCCCCCceEEEEECCC-CCEEEEEcCCCe
Confidence 567788888 7799999999999999999999775 2344433 4678999999996 679999999999
Q ss_pred EEEEECCCCcEEEE--------EEEE----eecCCceEEEecCccceE
Q 004989 681 VQVGQVLHLIYFSA--------LYCI----VLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 681 v~lWD~~tg~~~~~--------v~~v----~~~~~~~~~~~~~~~~~~ 716 (720)
|+|||+++++++.+ |+++ +|++.+..+++|+.|...
T Consensus 238 i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i 285 (437)
T 3gre_A 238 IDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFL 285 (437)
T ss_dssp EEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEE
T ss_pred EEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcE
Confidence 99999999999875 7888 566678899999988643
No 367
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.09 E-value=2.2e-10 Score=135.95 Aligned_cols=124 Identities=11% Similarity=0.107 Sum_probs=93.4
Q ss_pred hhhhhhcccc--ceEEeeeeccCCCCCCCCCeEEEEECCC--CCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cC
Q 004989 581 EGLCKYLSFS--KLRVKADLNQGDLLNSSNLVCSLSFDRD--GELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-AS 655 (720)
Q Consensus 581 ~~l~~~~~~~--~~~~~~~l~~~~~~~~~~~V~sv~f~~d--g~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~ 655 (720)
++..++|... +.+.+.++ .+|.+.|.+++|+|+ |.+|||||.|++|+|||+.+... .++..+ .|
T Consensus 30 dg~I~vwd~~~~~~~~~~~l-----~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~------~~~~~~~~h 98 (753)
T 3jro_A 30 DKTIKIFEVEGETHKLIDTL-----TGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRW------SQIAVHAVH 98 (753)
T ss_dssp TTEEEEEEEETTEEEEEEEE-----CCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEE------EEEEEECCC
T ss_pred CCcEEEEecCCCCCccceec-----cCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcc------cccccccCC
Confidence 3445555544 44555554 456899999999988 99999999999999999876411 123333 35
Q ss_pred CCCEEEEEEecCC-CCEEEEEeCCCcEEEEECCCCcEEE---------EEEEEeecC-------------CceEEEecCc
Q 004989 656 RSKLSSICWNSYI-KSQIASSNFEGVVQVGQVLHLIYFS---------ALYCIVLNK-------------LLIIFRYGMF 712 (720)
Q Consensus 656 ~~~i~~l~w~~~~-~~~laS~s~D~~v~lWD~~tg~~~~---------~v~~v~~~~-------------~~~~~~~~~~ 712 (720)
...|++++|+|+. +++|++|+.||+|+|||+.++.... .|++++|+| .+..+.+|+-
T Consensus 99 ~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~ 178 (753)
T 3jro_A 99 SASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGA 178 (753)
T ss_dssp SSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEET
T ss_pred CCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEEC
Confidence 7789999999963 6799999999999999999883221 189999999 4777888776
Q ss_pred cce
Q 004989 713 QEV 715 (720)
Q Consensus 713 ~~~ 715 (720)
|-.
T Consensus 179 dg~ 181 (753)
T 3jro_A 179 DNL 181 (753)
T ss_dssp TSC
T ss_pred CCe
Confidence 653
No 368
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.08 E-value=5.9e-10 Score=123.28 Aligned_cols=101 Identities=11% Similarity=0.136 Sum_probs=82.0
Q ss_pred CCCC-CeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCEEEEEEecCCCCEEEEEeCCCcEE
Q 004989 605 NSSN-LVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEGVVQ 682 (720)
Q Consensus 605 ~~~~-~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~l~w~~~~~~~laS~s~D~~v~ 682 (720)
+|.+ +|.++.| ++.+||||+.|++|+|||+.+. .++..+. |.+.|.+++|+|++ +|+||+.||+|+
T Consensus 119 ~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~--------~~~~~~~~h~~~V~~l~~~~~~--~l~s~s~dg~i~ 186 (464)
T 3v7d_B 119 GHMTSVITCLQF--EDNYVITGADDKMIRVYDSINK--------KFLLQLSGHDGGVWALKYAHGG--ILVSGSTDRTVR 186 (464)
T ss_dssp CCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTT--------EEEEEECCCSSCEEEEEECSTT--EEEEEETTSCEE
T ss_pred CCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCC--------cEEEEEeCCCcCEEEEEEcCCC--EEEEEeCCCCEE
Confidence 3454 4677777 5689999999999999998776 2444444 57789999999854 899999999999
Q ss_pred EEECCCCcEEEE-------EEEEeec--CCceEEEecCccceEE
Q 004989 683 VGQVLHLIYFSA-------LYCIVLN--KLLIIFRYGMFQEVKY 717 (720)
Q Consensus 683 lWD~~tg~~~~~-------v~~v~~~--~~~~~~~~~~~~~~~~ 717 (720)
|||+.+++++.. |.|++|+ +.+..+.+|+.|...+
T Consensus 187 vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~ 230 (464)
T 3v7d_B 187 VWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLH 230 (464)
T ss_dssp EEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEE
T ss_pred EEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEE
Confidence 999999998876 8899998 5778888888876443
No 369
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.08 E-value=3e-10 Score=120.77 Aligned_cols=97 Identities=5% Similarity=0.059 Sum_probs=70.0
Q ss_pred CCCeEEEEECCC----CCEEEEeeC--------------------CCcEEEeeCCcccccccccccceEEecCCCCEEEE
Q 004989 607 SNLVCSLSFDRD----GELFAAAGV--------------------NKKIKVFECDAIINENRDIHYPVVEMASRSKLSSI 662 (720)
Q Consensus 607 ~~~V~sv~f~~d----g~~lat~~~--------------------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l 662 (720)
.+.|++|+|+|| ++++|++|. |++|++|++.... ........+...++.+
T Consensus 111 ~~~v~sla~spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG------~~~~s~~~~~~~v~~l 184 (356)
T 2w18_A 111 IREIRALFCSSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDG------GGKENQFLMPPEETIL 184 (356)
T ss_dssp EEEEEEECC------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTS------CEEEEEEECCCSSCEE
T ss_pred ccceEEEEECCCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCC------ceeeeeccCCCceeeE
Confidence 357899999999 888888774 7777777764311 1111222345678888
Q ss_pred EEec--CCCCEEEEEeCCCcEEEEECCCCcEEEEE----------EEEeecCCceEEEe
Q 004989 663 CWNS--YIKSQIASSNFEGVVQVGQVLHLIYFSAL----------YCIVLNKLLIIFRY 709 (720)
Q Consensus 663 ~w~~--~~~~~laS~s~D~~v~lWD~~tg~~~~~v----------~~v~~~~~~~~~~~ 709 (720)
+|+| .++.+|||||+|++|||||+.||+++.++ .+++|+|.+..++.
T Consensus 185 ~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs 243 (356)
T 2w18_A 185 TFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIV 243 (356)
T ss_dssp EEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEE
T ss_pred EeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEE
Confidence 8887 34579999999999999999999999884 46789999988743
No 370
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.07 E-value=1.4e-09 Score=112.94 Aligned_cols=122 Identities=12% Similarity=0.157 Sum_probs=96.9
Q ss_pred hhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCE
Q 004989 581 EGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKL 659 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i 659 (720)
+.-.++|...+.+++..++ +.+|...|.+|+|+|+|++|||||.|++|+|||+.+. .++..+. |...+
T Consensus 44 D~tV~iWd~~tg~~~~~~~---~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~--------~~~~~~~~h~~~~ 112 (318)
T 4ggc_A 44 DNSVYLWSASSGDILQLLQ---MEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQ--------KRLRNMTSHSARV 112 (318)
T ss_dssp TTEEEEEETTTCCEEEEEE---CCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTT--------EEEEEEECCSSCE
T ss_pred CCEEEEEECCCCCEEEEEE---ecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCc--------eeEEEecCccceE
Confidence 4556778777777777775 3467899999999999999999999999999999876 2343333 45567
Q ss_pred EEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEE-E-------EEEEeecCCceEEEecCccceE
Q 004989 660 SSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFS-A-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 660 ~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~-~-------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
.++++++ .+|+|++.|+.+++|+..++.... . +.++.|++.+..+.+++.|...
T Consensus 113 ~~~~~~~---~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i 174 (318)
T 4ggc_A 113 GSLSWNS---YILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLV 174 (318)
T ss_dssp EEEEEET---TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred EEeecCC---CEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcce
Confidence 7766654 589999999999999998875443 2 7899999999999999888643
No 371
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.06 E-value=8e-10 Score=118.97 Aligned_cols=103 Identities=13% Similarity=0.142 Sum_probs=87.3
Q ss_pred CCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec----C---CCCEEEEEEecCCCCEEEEEeC
Q 004989 605 NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA----S---RSKLSSICWNSYIKSQIASSNF 677 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~----~---~~~i~~l~w~~~~~~~laS~s~ 677 (720)
.|...|.+++|+|+| +||+|+.|++|+|||+++. .++..+. | ...|.+++|+|+ +.+||+++.
T Consensus 184 ~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~--------~~~~~~~~~~~h~~~~~~i~~i~~~~~-~~~l~~~~~ 253 (397)
T 1sq9_A 184 TPSQFATSVDISERG-LIATGFNNGTVQISELSTL--------RPLYNFESQHSMINNSNSIRSVKFSPQ-GSLLAIAHD 253 (397)
T ss_dssp SSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTT--------EEEEEEECCC---CCCCCEEEEEECSS-TTEEEEEEE
T ss_pred CCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCC--------ceeEEEeccccccccCCccceEEECCC-CCEEEEEec
Confidence 468899999999999 9999999999999998765 2444444 3 678999999996 569999999
Q ss_pred C---CcEEEEECCCCcEEEE--------------------EEEEeecCCceEEEecCccceEE
Q 004989 678 E---GVVQVGQVLHLIYFSA--------------------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 678 D---~~v~lWD~~tg~~~~~--------------------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
| |+|+|||+.+++.+.+ |++++|++.+..+.+|+.|...+
T Consensus 254 d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~ 316 (397)
T 1sq9_A 254 SNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLR 316 (397)
T ss_dssp ETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEE
T ss_pred CCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEE
Confidence 9 9999999999987763 57899999999999998876443
No 372
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.05 E-value=1.4e-09 Score=116.81 Aligned_cols=105 Identities=10% Similarity=0.045 Sum_probs=88.9
Q ss_pred CCCCCCCeEEEEECC-CCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCC--CEEEEEeCCC
Q 004989 603 LLNSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIK--SQIASSNFEG 679 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~-dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~--~~laS~s~D~ 679 (720)
..+|...|.+++|+| ++.+||+|+.|++|+|||+.+. .++..+.+...+.+++|+|... .+|++++.||
T Consensus 95 ~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (408)
T 4a11_B 95 PDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTL--------QTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGP 166 (408)
T ss_dssp TTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTT--------EEEEEEECSSCEEEEEECSSCSSCCEEEEEESSS
T ss_pred cccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCC--------ccceeccCCCceeeeEeecCCCCCcEEEEEcCCC
Confidence 456899999999999 7789999999999999998875 2445555677899999998643 4999999999
Q ss_pred cEEEEECCCCcEEEE-------EEEEeecCCce-EEEecCccce
Q 004989 680 VVQVGQVLHLIYFSA-------LYCIVLNKLLI-IFRYGMFQEV 715 (720)
Q Consensus 680 ~v~lWD~~tg~~~~~-------v~~v~~~~~~~-~~~~~~~~~~ 715 (720)
.|++||+.+++.+.. |+|++|+|.+. ++++|+.|-.
T Consensus 167 ~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~ 210 (408)
T 4a11_B 167 KVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSR 210 (408)
T ss_dssp SEEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSC
T ss_pred eEEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCc
Confidence 999999999988766 89999999988 5778877654
No 373
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.04 E-value=2.4e-10 Score=120.33 Aligned_cols=97 Identities=10% Similarity=0.135 Sum_probs=79.9
Q ss_pred CCCCCeEEEEECCCCC-EEEEeeCCCcEEEeeC-CcccccccccccceEEec--CCCCEEEEEEecCCCCEEEEEeCCCc
Q 004989 605 NSSNLVCSLSFDRDGE-LFAAAGVNKKIKVFEC-DAIINENRDIHYPVVEMA--SRSKLSSICWNSYIKSQIASSNFEGV 680 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~-~lat~~~d~~i~iwd~-~~~~~~~~~~~~~~~~~~--~~~~i~~l~w~~~~~~~laS~s~D~~ 680 (720)
+|...|.+++|+|+|+ +||+|+.|++|++||+ .+.. ...... +...|.+++|+| +++|++++.||+
T Consensus 54 ~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~--------~~~~~~~~~~~~v~~l~~~~--~~~l~s~~~d~~ 123 (342)
T 1yfq_A 54 RYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPS--------FQALTNNEANLGICRICKYG--DDKLIAASWDGL 123 (342)
T ss_dssp ECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSS--------EEECBSCCCCSCEEEEEEET--TTEEEEEETTSE
T ss_pred ecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCc--------eEeccccCCCCceEEEEeCC--CCEEEEEcCCCe
Confidence 5688999999999999 9999999999999998 6652 112223 567899999999 579999999999
Q ss_pred EEEEECCC---------CcEEEE------EEEEeecCCceEEEecCcc
Q 004989 681 VQVGQVLH---------LIYFSA------LYCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 681 v~lWD~~t---------g~~~~~------v~~v~~~~~~~~~~~~~~~ 713 (720)
|++||+++ ++++.+ +++++|++.. +..|+.|
T Consensus 124 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--l~~~~~d 169 (342)
T 1yfq_A 124 IEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSR--LIVGMNN 169 (342)
T ss_dssp EEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSE--EEEEEST
T ss_pred EEEEcccccccccccccCCeeeEEeeCCceEEEEecCCc--EEEEeCC
Confidence 99999988 765543 8999999988 5555555
No 374
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.03 E-value=1.7e-09 Score=119.19 Aligned_cols=116 Identities=9% Similarity=0.182 Sum_probs=92.0
Q ss_pred hhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec----CC
Q 004989 581 EGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA----SR 656 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~----~~ 656 (720)
++..+++...+.+.+.++. +|...|.+++| ++.+|++|+.|++|+|||+.+. .++..+. +.
T Consensus 298 d~~i~i~d~~~~~~~~~~~-----~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~--------~~~~~~~~~~~~~ 362 (445)
T 2ovr_B 298 DTSIRVWDVETGNCIHTLT-----GHQSLTSGMEL--KDNILVSGNADSTVKIWDIKTG--------QCLQTLQGPNKHQ 362 (445)
T ss_dssp TSCEEEEETTTCCEEEEEC-----CCCSCEEEEEE--ETTEEEEEETTSCEEEEETTTC--------CEEEEECSTTSCS
T ss_pred CCeEEEEECCCCCEEEEEc-----CCcccEEEEEE--eCCEEEEEeCCCeEEEEECCCC--------cEEEEEccCCCCC
Confidence 3445566666666666654 45788888887 4679999999999999998765 2333333 46
Q ss_pred CCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE------------EEEEeecCCceEEEecCccc
Q 004989 657 SKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA------------LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 657 ~~i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~------------v~~v~~~~~~~~~~~~~~~~ 714 (720)
..|.+++|++ ++||+|+.||+|+|||+.+|+.+.. |++++|++.+..++.|+.|.
T Consensus 363 ~~v~~~~~~~---~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg 429 (445)
T 2ovr_B 363 SAVTCLQFNK---NFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNG 429 (445)
T ss_dssp SCEEEEEECS---SEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSS
T ss_pred CCEEEEEECC---CEEEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCC
Confidence 6799999974 6999999999999999999998764 79999999999999998876
No 375
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.02 E-value=2.2e-09 Score=115.51 Aligned_cols=118 Identities=8% Similarity=-0.013 Sum_probs=91.3
Q ss_pred hhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEE-EEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEE
Q 004989 583 LCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELF-AAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSS 661 (720)
Q Consensus 583 l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~l-at~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~ 661 (720)
..+++...+.+++..+.+ ...|.+++|+|||+++ ++++.|++|++||+.++ ..+..+.+...+.+
T Consensus 13 ~v~v~d~~~~~~~~~~~~------~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~--------~~~~~~~~~~~v~~ 78 (391)
T 1l0q_A 13 NISVIDVTSNKVTATIPV------GSNPMGAVISPDGTKVYVANAHSNDVSIIDTATN--------NVIATVPAGSSPQG 78 (391)
T ss_dssp EEEEEETTTTEEEEEEEC------SSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTT--------EEEEEEECSSSEEE
T ss_pred EEEEEECCCCeEEEEeec------CCCcceEEECCCCCEEEEECCCCCeEEEEECCCC--------eEEEEEECCCCccc
Confidence 345556666677777763 2348999999999975 78889999999998775 24455555668999
Q ss_pred EEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE------EEEEeecCCceEE-EecCccc
Q 004989 662 ICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA------LYCIVLNKLLIIF-RYGMFQE 714 (720)
Q Consensus 662 l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~------v~~v~~~~~~~~~-~~~~~~~ 714 (720)
++|+|++..++++++.|++|++||+.+++.+.. +++++|++.+..+ ..++-|.
T Consensus 79 ~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~ 138 (391)
T 1l0q_A 79 VAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDK 138 (391)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTT
T ss_pred eEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCCCCcceEEECCCCCEEEEEeCCCC
Confidence 999997654456777789999999999998876 7899999998755 6666554
No 376
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=98.99 E-value=3.3e-09 Score=120.88 Aligned_cols=118 Identities=14% Similarity=0.160 Sum_probs=93.4
Q ss_pred hhhhhhccccceEEeeeeccCCCCCCCC---CeEEEEECCC-CCEEEEeeCCCcEEEeeCCcccccccccccceEEe---
Q 004989 581 EGLCKYLSFSKLRVKADLNQGDLLNSSN---LVCSLSFDRD-GELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM--- 653 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~---~V~sv~f~~d-g~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~--- 653 (720)
++..++|...+.+.+..++ +|.. .|.+++|+|+ |++||+|+.|++|+|||+.+. .++..+
T Consensus 182 d~~v~vwd~~~~~~~~~~~-----~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~--------~~~~~~~~~ 248 (615)
T 1pgu_A 182 DGSVVFYQGPPFKFSASDR-----THHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSG--------EFLKYIEDD 248 (615)
T ss_dssp TTEEEEEETTTBEEEEEEC-----SSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTC--------CEEEECCBT
T ss_pred CCcEEEEeCCCcceeeeec-----ccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCC--------CEeEEeccc
Confidence 4455667777777777775 3466 8999999999 999999999999999998775 244455
Q ss_pred --cCCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-----------EEEEeecCCceEEEecCccc
Q 004989 654 --ASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-----------LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 654 --~~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~-----------v~~v~~~~~~~~~~~~~~~~ 714 (720)
.+...|.+++|+ ++.+|++++.||+|++||+.+++++.+ +.++.|+ .+..+..|+.|.
T Consensus 249 ~~~~~~~v~~~~~~--~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~g 319 (615)
T 1pgu_A 249 QEPVQGGIFALSWL--DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVAT-GNGRIISLSLDG 319 (615)
T ss_dssp TBCCCSCEEEEEES--SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEE-ETTEEEEEETTS
T ss_pred ccccCCceEEEEEc--CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeC-CCCeEEEEECCC
Confidence 567789999999 567999999999999999999998876 4466665 555666666554
No 377
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.95 E-value=5.3e-09 Score=115.09 Aligned_cols=96 Identities=11% Similarity=0.137 Sum_probs=78.3
Q ss_pred CCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCCcEEE
Q 004989 605 NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGVVQV 683 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~w~~~~~~~laS~s~D~~v~l 683 (720)
+|...|.|++| ||++||+|+.|++|+|||..+. .++..+ .|...|.+++|+ +++||||+.||+|+|
T Consensus 131 ~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~--------~~~~~~~~h~~~v~~l~~~---~~~l~sg~~dg~i~v 197 (435)
T 1p22_A 131 ETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTL--------ECKRILTGHTGSVLCLQYD---ERVIITGSSDSTVRV 197 (435)
T ss_dssp SSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSC--------CEEEEECCCSSCEEEEECC---SSEEEEEETTSCEEE
T ss_pred CCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCC--------eEEEEEcCCCCcEEEEEEC---CCEEEEEcCCCeEEE
Confidence 45678999988 7999999999999999998765 233334 357789999993 469999999999999
Q ss_pred EECCCCcEEEE-------EEEEeecCCceEEEecCccce
Q 004989 684 GQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 684 WD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
||+.+++++.+ |.+++|++. .+.+|+.|..
T Consensus 198 wd~~~~~~~~~~~~h~~~v~~l~~~~~--~l~s~s~dg~ 234 (435)
T 1p22_A 198 WDVNTGEMLNTLIHHCEAVLHLRFNNG--MMVTCSKDRS 234 (435)
T ss_dssp EESSSCCEEEEECCCCSCEEEEECCTT--EEEEEETTSC
T ss_pred EECCCCcEEEEEcCCCCcEEEEEEcCC--EEEEeeCCCc
Confidence 99999999887 889999864 6677766643
No 378
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.93 E-value=7.4e-09 Score=113.93 Aligned_cols=98 Identities=13% Similarity=0.218 Sum_probs=81.9
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCEEEEEEecCCCCEEEEEeCCCcE
Q 004989 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~l~w~~~~~~~laS~s~D~~v 681 (720)
+.+|...|.+++| +|++||+|+.|++|+|||+.+. .++..+. +...|.+++|++ ++|++|+.||+|
T Consensus 252 ~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~--------~~~~~~~~~~~~v~~~~~~~---~~l~~g~~dg~i 318 (435)
T 1p22_A 252 LVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTC--------EFVRTLNGHKRGIACLQYRD---RLVVSGSSDNTI 318 (435)
T ss_dssp ECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTC--------CEEEEEECCSSCEEEEEEET---TEEEEEETTSCE
T ss_pred ecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcC--------cEEEEEcCCCCcEEEEEeCC---CEEEEEeCCCeE
Confidence 4578899999999 8899999999999999998875 2444443 467899999964 699999999999
Q ss_pred EEEECCCCcEEEE-------EEEEeecCCceEEEecCccce
Q 004989 682 QVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 682 ~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
+|||+++|+++.+ |+|++| .+..+++|+.|..
T Consensus 319 ~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~ 357 (435)
T 1p22_A 319 RLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGK 357 (435)
T ss_dssp EEEETTTCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSC
T ss_pred EEEECCCCCEEEEEeCCcCcEEEEEe--cCCEEEEEeCCCc
Confidence 9999999999887 889999 4566777777753
No 379
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.93 E-value=6.2e-09 Score=114.66 Aligned_cols=115 Identities=10% Similarity=0.114 Sum_probs=89.3
Q ss_pred hhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCC
Q 004989 580 LEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSK 658 (720)
Q Consensus 580 ~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~ 658 (720)
.++..+.|...+.+.+.+++ +|...|.+++|+ +.+|||||.|++|+|||+.++ .++..+. |...
T Consensus 137 ~dg~i~vwd~~~~~~~~~~~-----~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~--------~~~~~~~~h~~~ 201 (445)
T 2ovr_B 137 DDNTLKVWSAVTGKCLRTLV-----GHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETG--------ECIHTLYGHTST 201 (445)
T ss_dssp TTSCEEEEETTTCCEEEECC-----CCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTT--------EEEEEECCCSSC
T ss_pred CCCcEEEEECCCCcEEEEEc-----CCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcC--------cEEEEECCCCCc
Confidence 34455666666666666654 568999999997 679999999999999998776 2333443 4677
Q ss_pred EEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccc
Q 004989 659 LSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 659 i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~ 714 (720)
|.+++|++ +.|++|+.||+|++||+.+++++.. |.|++|+ +..+++|+.|.
T Consensus 202 v~~~~~~~---~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg 259 (445)
T 2ovr_B 202 VRCMHLHE---KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYDF 259 (445)
T ss_dssp EEEEEEET---TEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEEC--SSCEEEEETTS
T ss_pred EEEEEecC---CEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEEC--CCEEEEEcCCC
Confidence 99999975 5799999999999999999998876 7888884 45566666654
No 380
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=98.93 E-value=1.2e-10 Score=126.29 Aligned_cols=67 Identities=7% Similarity=0.160 Sum_probs=56.2
Q ss_pred EEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEccCC----------ceEEeec
Q 004989 97 VHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFN----------HVSFIES 165 (720)
Q Consensus 97 ~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~----------~vkliDf 165 (720)
++|||| .|.+|.++.. ..++..++.||+.+|.|||++|||||||||.|||++.++ .+.||||
T Consensus 187 ~LVME~i~G~~L~~l~~-------~~~~~~l~~qll~~l~~lH~~gIVHrDLKp~NILl~~dgd~~d~~~~~~~~~iID~ 259 (397)
T 4gyi_A 187 TIVMSLVDALPMRQVSS-------VPDPASLYADLIALILRLAKHGLIHGDFNEFNILIREEKDAEDPSSITLTPIIIXF 259 (397)
T ss_dssp EEEEECCSCEEGGGCCC-------CSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEEEEECSSCTTSEEEEEEECCC
T ss_pred eEEEEecCCccHhhhcc-------cHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeCCCCcccccccccceEEEEe
Confidence 699999 8888876431 124567899999999999999999999999999999877 3899999
Q ss_pred CcccC
Q 004989 166 ASCSD 170 (720)
Q Consensus 166 g~a~~ 170 (720)
+.+..
T Consensus 260 ~Q~V~ 264 (397)
T 4gyi_A 260 PQMVS 264 (397)
T ss_dssp TTCEE
T ss_pred CCccc
Confidence 98744
No 381
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=98.92 E-value=3.3e-09 Score=115.80 Aligned_cols=120 Identities=10% Similarity=0.030 Sum_probs=93.4
Q ss_pred hhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCEEEEE
Q 004989 585 KYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSIC 663 (720)
Q Consensus 585 ~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~l~ 663 (720)
..+...+.+++..+..+.+.+|...|.+++|+|+|.++++++.|++|++||+.+. .++..+. +...+.+++
T Consensus 147 ~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~--------~~~~~~~~~~~~~~~~~ 218 (433)
T 3bws_A 147 DVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTL--------AYKATVDLTGKWSKILL 218 (433)
T ss_dssp EEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTC--------CEEEEEECSSSSEEEEE
T ss_pred EEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCc--------eEEEEEcCCCCCeeEEE
Confidence 4444455555554444456678899999999999999999999999999998765 2333333 456799999
Q ss_pred EecCCCCEEEEEeCCCcEEEEECCCCcEEEE------EEEEeecCCceEEEecCc
Q 004989 664 WNSYIKSQIASSNFEGVVQVGQVLHLIYFSA------LYCIVLNKLLIIFRYGMF 712 (720)
Q Consensus 664 w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~------v~~v~~~~~~~~~~~~~~ 712 (720)
|+|++..++++++.|++|++||+.+++.+.. +.+++|++.+..+..++.
T Consensus 219 ~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~ 273 (433)
T 3bws_A 219 YDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIGLPRGLLLSKDGKELYIAQF 273 (433)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTTTEEEEECCCCSEEEEEEECTTSSEEEEEEE
T ss_pred EcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCCCCceEEEEcCCCCEEEEEEC
Confidence 9997664556777899999999999998876 789999999977776664
No 382
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=98.90 E-value=1.3e-08 Score=109.43 Aligned_cols=120 Identities=8% Similarity=-0.027 Sum_probs=92.3
Q ss_pred hhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEE-EEeeCCCcEEEeeCCcccccccccccceEEecCCCCE
Q 004989 581 EGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELF-AAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKL 659 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~l-at~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i 659 (720)
++..+++...+.+++..+.+ ...|.+++|+|||++| ++++.|++|++||+.+. ..+..+.+...+
T Consensus 53 d~~i~v~d~~~~~~~~~~~~------~~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~--------~~~~~~~~~~~~ 118 (391)
T 1l0q_A 53 SNDVSIIDTATNNVIATVPA------GSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSN--------TVAGTVKTGKSP 118 (391)
T ss_dssp GTEEEEEETTTTEEEEEEEC------SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTT--------EEEEEEECSSSE
T ss_pred CCeEEEEECCCCeEEEEEEC------CCCccceEECCCCCEEEEEECCCCEEEEEECCCC--------eEEEEEeCCCCc
Confidence 33455666667777777764 2389999999999976 55567799999998875 234445556679
Q ss_pred EEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE------EEEEeecCCceEE-EecCccc
Q 004989 660 SSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA------LYCIVLNKLLIIF-RYGMFQE 714 (720)
Q Consensus 660 ~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~------v~~v~~~~~~~~~-~~~~~~~ 714 (720)
.+++|+|+++.++++++.|++|++||+.+++.+.. +.+++|++.+..+ ..++-+.
T Consensus 119 ~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~ 180 (391)
T 1l0q_A 119 LGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSM 180 (391)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTT
T ss_pred ceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCCCcceEEECCCCCEEEEEeCCCC
Confidence 99999997654558999999999999999998876 6799999998655 6666553
No 383
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=98.84 E-value=1.4e-08 Score=111.60 Aligned_cols=100 Identities=9% Similarity=-0.089 Sum_probs=79.5
Q ss_pred CCCCCeEEEEECCCCCEEEEeeCCC---cEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEE-EEeCCCc
Q 004989 605 NSSNLVCSLSFDRDGELFAAAGVNK---KIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIA-SSNFEGV 680 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~~lat~~~d~---~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~la-S~s~D~~ 680 (720)
+|...|.+++|+|||++||+++.|+ +|++||+.++. +.....+...+.+++|+|+++ +|| +++.|+.
T Consensus 176 ~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~--------~~~l~~~~~~~~~~~~spdg~-~la~~~~~~g~ 246 (415)
T 2hqs_A 176 RSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGA--------VRQVASFPRHNGAPAFSPDGS-KLAFALSKTGS 246 (415)
T ss_dssp EESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC--------EEEEECCSSCEEEEEECTTSS-EEEEEECTTSS
T ss_pred CCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCc--------EEEeecCCCcccCEEEcCCCC-EEEEEEecCCC
Confidence 4578899999999999999999886 99999998752 222233456799999999765 565 7777765
Q ss_pred --EEEEECCCCcEEEE------EEEEeecCCceEEEecCcc
Q 004989 681 --VQVGQVLHLIYFSA------LYCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 681 --v~lWD~~tg~~~~~------v~~v~~~~~~~~~~~~~~~ 713 (720)
|.+||+.+++...- +.+++|+|.+..+.+++-+
T Consensus 247 ~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdg~~l~~~s~~ 287 (415)
T 2hqs_A 247 LNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQ 287 (415)
T ss_dssp CEEEEEETTTCCEEECCCCSSCEEEEEECTTSSEEEEEECT
T ss_pred ceEEEEECCCCCEEeCcCCCCcccceEECCCCCEEEEEECC
Confidence 99999999986432 7899999999988877653
No 384
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=98.72 E-value=1e-07 Score=103.82 Aligned_cols=119 Identities=11% Similarity=0.056 Sum_probs=89.2
Q ss_pred hhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEE-EEeeCCCcEEEeeCCcccccccccccceEEecCCCCEE
Q 004989 582 GLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELF-AAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLS 660 (720)
Q Consensus 582 ~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~l-at~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~ 660 (720)
+-.+.+...+.+.+..+. .|...|.+++|+|||+++ ++++.|++|++||+.+. .++..+.....+.
T Consensus 191 ~~v~~~d~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~--------~~~~~~~~~~~~~ 257 (433)
T 3bws_A 191 NAVHVFDLKTLAYKATVD-----LTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTK--------LEIRKTDKIGLPR 257 (433)
T ss_dssp TEEEEEETTTCCEEEEEE-----CSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTT--------EEEEECCCCSEEE
T ss_pred CEEEEEECCCceEEEEEc-----CCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCC--------cEEEEecCCCCce
Confidence 334555555556666654 347889999999999976 56668999999998765 2344455556799
Q ss_pred EEEEecCCCCEEEEEe--------CCCcEEEEECCCCcEEEE------EEEEeecCCce-EEEecCccc
Q 004989 661 SICWNSYIKSQIASSN--------FEGVVQVGQVLHLIYFSA------LYCIVLNKLLI-IFRYGMFQE 714 (720)
Q Consensus 661 ~l~w~~~~~~~laS~s--------~D~~v~lWD~~tg~~~~~------v~~v~~~~~~~-~~~~~~~~~ 714 (720)
+++|+|++ .+|++++ .||+|++||+.+++.+.. +.+++|++.+. ++..++.|.
T Consensus 258 ~~~~~~~g-~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~ 325 (433)
T 3bws_A 258 GLLLSKDG-KELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMCCS 325 (433)
T ss_dssp EEEECTTS-SEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEEETTTT
T ss_pred EEEEcCCC-CEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCCcceEEECCCCCEEEEEecCCC
Confidence 99999965 5788777 489999999999987765 67899999984 556655553
No 385
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=98.51 E-value=5.7e-07 Score=98.68 Aligned_cols=102 Identities=7% Similarity=-0.151 Sum_probs=77.8
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeC-CC--cEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCC
Q 004989 603 LLNSSNLVCSLSFDRDGELFAAAGV-NK--KIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFE 678 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~-d~--~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~w~~~~~~~laS~s~D 678 (720)
+.+|...+.+++|+|||++||+++. ++ +|.+||..+.. +..+ .+...+.+++|+|++ .+||+++.|
T Consensus 262 l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~---------~~~l~~~~~~~~~~~~spdG-~~l~~~~~~ 331 (415)
T 2hqs_A 262 VTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGA---------PQRITWEGSQNQDADVSSDG-KFMVMVSSN 331 (415)
T ss_dssp CCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSC---------CEECCCSSSEEEEEEECTTS-SEEEEEEEC
T ss_pred CcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCC---------EEEEecCCCcccCeEECCCC-CEEEEEECc
Confidence 4556789999999999999988886 45 67777876541 1112 234568899999965 577777754
Q ss_pred ---CcEEEEECCCCcEEEE-----EEEEeecCCceEEEecCccc
Q 004989 679 ---GVVQVGQVLHLIYFSA-----LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 679 ---~~v~lWD~~tg~~~~~-----v~~v~~~~~~~~~~~~~~~~ 714 (720)
..|.+||+.+++...- +.+++|+|.+..+.+++-+.
T Consensus 332 ~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~spdg~~l~~~s~~~ 375 (415)
T 2hqs_A 332 GGQQHIAKQDLATGGVQVLSSTFLDETPSLAPNGTMVIYSSSQG 375 (415)
T ss_dssp SSCEEEEEEETTTCCEEECCCSSSCEEEEECTTSSEEEEEEEET
T ss_pred CCceEEEEEECCCCCEEEecCCCCcCCeEEcCCCCEEEEEEcCC
Confidence 5899999999987432 78999999999988888765
No 386
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=98.50 E-value=1.1e-06 Score=100.10 Aligned_cols=97 Identities=8% Similarity=0.026 Sum_probs=76.3
Q ss_pred hhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeC--CcccccccccccceEEecCCCCEEE
Q 004989 584 CKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFEC--DAIINENRDIHYPVVEMASRSKLSS 661 (720)
Q Consensus 584 ~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~--~~~~~~~~~~~~~~~~~~~~~~i~~ 661 (720)
...+.-.+.+++.++.. ++. +.+++|+|||++|++++.|++|++||+ .+. ..+..+.+......
T Consensus 161 V~v~D~~t~~~~~~i~~----g~~--~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~--------~~~~~i~~g~~p~~ 226 (543)
T 1nir_A 161 IALVDGDSKKIVKVIDT----GYA--VHISRMSASGRYLLVIGRDARIDMIDLWAKEP--------TKVAEIKIGIEARS 226 (543)
T ss_dssp EEEEETTTCCEEEEEEC----STT--EEEEEECTTSCEEEEEETTSEEEEEETTSSSC--------EEEEEEECCSEEEE
T ss_pred EEEEECCCceEEEEEec----Ccc--cceEEECCCCCEEEEECCCCeEEEEECcCCCC--------cEEEEEecCCCcce
Confidence 34455567777887763 122 899999999999999999999999998 554 23445555567899
Q ss_pred EEEec----CCCCEEEEEeC-CCcEEEEECCCCcEEEEE
Q 004989 662 ICWNS----YIKSQIASSNF-EGVVQVGQVLHLIYFSAL 695 (720)
Q Consensus 662 l~w~~----~~~~~laS~s~-D~~v~lWD~~tg~~~~~v 695 (720)
|+|+| ++ .+|+++++ |++|+|||..|+++++++
T Consensus 227 va~sp~~~~dg-~~l~v~~~~~~~v~v~D~~t~~~~~~i 264 (543)
T 1nir_A 227 VESSKFKGYED-RYTIAGAYWPPQFAIMDGETLEPKQIV 264 (543)
T ss_dssp EEECCSTTCTT-TEEEEEEEESSEEEEEETTTCCEEEEE
T ss_pred EEeCCCcCCCC-CEEEEEEccCCeEEEEeccccccceee
Confidence 99999 65 58888885 899999999999998764
No 387
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=98.40 E-value=1.1e-06 Score=107.88 Aligned_cols=101 Identities=15% Similarity=0.105 Sum_probs=79.5
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCC--
Q 004989 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEG-- 679 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~w~~~~~~~laS~s~D~-- 679 (720)
+.+|...|.+++|+|||++||+++.+++|++||+.++. ..... .+...|.+++|||++ .+||+++.++
T Consensus 374 l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~--------~~~~~~~~~~~v~~~~~SpDG-~~la~~~~~~~~ 444 (1045)
T 1k32_A 374 FEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGK--------PTVIERSREAMITDFTISDNS-RFIAYGFPLKHG 444 (1045)
T ss_dssp CCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCC--------EEEEEECSSSCCCCEEECTTS-CEEEEEEEECSS
T ss_pred ecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCc--------eEEeccCCCCCccceEECCCC-CeEEEEecCccc
Confidence 34667889999999999999999999999999997752 22222 346678999999965 5788777654
Q ss_pred --------cEEEEECCCCcEEEE------EEEEeecCCceEEEecCc
Q 004989 680 --------VVQVGQVLHLIYFSA------LYCIVLNKLLIIFRYGMF 712 (720)
Q Consensus 680 --------~v~lWD~~tg~~~~~------v~~v~~~~~~~~~~~~~~ 712 (720)
+|++||+.+|+...- +.+++|++.+..+.+++-
T Consensus 445 ~~~~~~~~~i~l~d~~~g~~~~l~~~~~~~~~~~~spdG~~l~~~s~ 491 (1045)
T 1k32_A 445 ETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSY 491 (1045)
T ss_dssp TTCSCCEEEEEEEETTTTEEEECSCSSSBEEEEEECTTSCEEEEEES
T ss_pred cccCCCCCeEEEEECCCCcEEEeeCCCcccCCceEcCCCCEEEEEec
Confidence 999999999883321 688999999987776664
No 388
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=98.37 E-value=8.7e-07 Score=92.53 Aligned_cols=106 Identities=10% Similarity=-0.008 Sum_probs=74.1
Q ss_pred ceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCC-CcEEEeeCC--cccccccccccceEEecCCCCEEEEEEecC
Q 004989 591 KLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVN-KKIKVFECD--AIINENRDIHYPVVEMASRSKLSSICWNSY 667 (720)
Q Consensus 591 ~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d-~~i~iwd~~--~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~ 667 (720)
+++++..+.+ ...+.+++|+|||++|++++.+ ++|++||+. ++. ...+..+.....+.+++|+|+
T Consensus 27 ~~~~~~~~~~------~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~s~d 94 (343)
T 1ri6_A 27 ALTLTQVVDV------PGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGA------LTFAAESALPGSLTHISTDHQ 94 (343)
T ss_dssp CEEEEEEEEC------SSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCC------EEEEEEEECSSCCSEEEECTT
T ss_pred cEEEeeeEec------CCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCc------eeeccccccCCCCcEEEEcCC
Confidence 4455555544 5678899999999988888876 999999986 221 013334444447899999996
Q ss_pred CCCEEEEEe-CCCcEEEEEC---CCCcEEEE------EEEEeecCCceEEEe
Q 004989 668 IKSQIASSN-FEGVVQVGQV---LHLIYFSA------LYCIVLNKLLIIFRY 709 (720)
Q Consensus 668 ~~~~laS~s-~D~~v~lWD~---~tg~~~~~------v~~v~~~~~~~~~~~ 709 (720)
+. +|+.++ .|++|.+||+ .+++.+.. +.+++|++.+..+..
T Consensus 95 g~-~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~ 145 (343)
T 1ri6_A 95 GQ-FVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWV 145 (343)
T ss_dssp SS-EEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEE
T ss_pred CC-EEEEEecCCCeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEE
Confidence 54 555554 5899999999 44444444 578899998864433
No 389
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.34 E-value=2.4e-06 Score=86.63 Aligned_cols=100 Identities=8% Similarity=-0.053 Sum_probs=72.8
Q ss_pred CCeEEEEECCCCCEEE-EeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEEC
Q 004989 608 NLVCSLSFDRDGELFA-AAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQV 686 (720)
Q Consensus 608 ~~V~sv~f~~dg~~la-t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~ 686 (720)
..+.+++|+|||++|+ +++.|++++||++..... .......+...+.+++|+|++..++++++.|+.++||++
T Consensus 129 ~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~------~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~ 202 (297)
T 2ojh_A 129 LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSG------VETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRV 202 (297)
T ss_dssp SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTC------CEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEE
T ss_pred CCccceEECCCCCEEEEEECCCCceEEEEEECCCC------cceEcccCCCccccceECCCCCEEEEEecCCCCccEEEE
Confidence 3489999999999877 888999999999643211 111122335679999999976534445556999999998
Q ss_pred C-CCcEEEE-------EEEEeecCCceEEEecCcc
Q 004989 687 L-HLIYFSA-------LYCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 687 ~-tg~~~~~-------v~~v~~~~~~~~~~~~~~~ 713 (720)
. .+..+.. +.+++|+|.+..+.+++.+
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~ 237 (297)
T 2ojh_A 203 RVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYD 237 (297)
T ss_dssp ETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEE
T ss_pred CCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcC
Confidence 6 4444443 7889999999988887765
No 390
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=98.32 E-value=3.8e-07 Score=93.26 Aligned_cols=95 Identities=12% Similarity=-0.025 Sum_probs=70.9
Q ss_pred chhhhhhcccCC-CCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH--
Q 004989 64 KHSDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-- 139 (720)
Q Consensus 64 ~~~e~~~L~~l~-HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs-- 139 (720)
..+|..+|..+. |..+.++++ +.... ...|++||| .|.+|.+.+. +......++.+++.+|..||+
T Consensus 56 ~~~E~~~l~~l~~~~~vP~v~~-~~~~~---~~~~lv~e~i~G~~l~~~~~------~~~~~~~~~~~l~~~l~~LH~~~ 125 (263)
T 3tm0_A 56 VEREKDMMLWLEGKLPVPKVLH-FERHD---GWSNLLMSEADGVLCSEEYE------DEQSPEKIIELYAECIRLFHSID 125 (263)
T ss_dssp HHHHHHHHHHHTTTSCCCCEEE-EEEET---TEEEEEEECCSSEEHHHHCC------TTTCHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHhcCCCCCeEEE-EEecC---CceEEEEEecCCeehhhccC------CcccHHHHHHHHHHHHHHHhCCC
Confidence 445566666653 566777887 44333 357999999 9999988641 122345788999999999998
Q ss_pred ---------------------------------------------------------CCceeccCCCCcEEEccCCceEE
Q 004989 140 ---------------------------------------------------------QGIVVHNVRPSCFVMSSFNHVSF 162 (720)
Q Consensus 140 ---------------------------------------------------------~gIvHrDLKP~NILl~~~~~vkl 162 (720)
.+++|+|++|.|||++..+.+.|
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~l 205 (263)
T 3tm0_A 126 ISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGF 205 (263)
T ss_dssp CTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEE
T ss_pred cccCCCcchHHHHHHHHHHHHhccccccccccccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEE
Confidence 55899999999999976555679
Q ss_pred eecCcc
Q 004989 163 IESASC 168 (720)
Q Consensus 163 iDfg~a 168 (720)
+||+.+
T Consensus 206 IDwe~a 211 (263)
T 3tm0_A 206 IDLGRS 211 (263)
T ss_dssp CCCTTC
T ss_pred EEchhc
Confidence 999876
No 391
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.32 E-value=1.1e-06 Score=89.24 Aligned_cols=104 Identities=9% Similarity=-0.070 Sum_probs=76.5
Q ss_pred CCCCCCCeEEEEECCCCCEEEEee-CCCcEEEeeCCcccccccccccceEEec-CCCCEEEEEEecCCCCEEEEEeCC--
Q 004989 603 LLNSSNLVCSLSFDRDGELFAAAG-VNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFE-- 678 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~l~w~~~~~~~laS~s~D-- 678 (720)
+..+...|.+++|+|||++|+.++ .|+.++||++.... ..+..+. +...+.+++|+|++ .+||.++.|
T Consensus 168 ~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~-------~~~~~~~~~~~~~~~~~~s~dg-~~l~~~~~~~~ 239 (297)
T 2ojh_A 168 LTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDG-------SSVERITDSAYGDWFPHPSPSG-DKVVFVSYDAD 239 (297)
T ss_dssp CCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTS-------SCEEECCCCSEEEEEEEECTTS-SEEEEEEEETT
T ss_pred cccCCCccccceECCCCCEEEEEecCCCCccEEEECCCC-------CCcEEEecCCcccCCeEECCCC-CEEEEEEcCCC
Confidence 445578899999999999877666 59999999975321 1222222 24568899999965 577777765
Q ss_pred ---------CcEEEEECCCCcE--EEE-------EEEEeecCCceEEEecCccc
Q 004989 679 ---------GVVQVGQVLHLIY--FSA-------LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 679 ---------~~v~lWD~~tg~~--~~~-------v~~v~~~~~~~~~~~~~~~~ 714 (720)
+.|.+||+.+++. +.. +.+++|+|.+..+.+++.+.
T Consensus 240 ~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 240 VFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp CCSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred CCcccccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEecc
Confidence 5699999998865 332 56789999999888877654
No 392
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=98.31 E-value=3.9e-07 Score=106.81 Aligned_cols=96 Identities=11% Similarity=0.148 Sum_probs=75.4
Q ss_pred CeEEEEECCCCCEEEEeeC---------CCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCC
Q 004989 609 LVCSLSFDRDGELFAAAGV---------NKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEG 679 (720)
Q Consensus 609 ~V~sv~f~~dg~~lat~~~---------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~ 679 (720)
.|.+++|||||++||+++. |++|+|||+.++.... ...+ ...+.+++|||++ +.||+++ |+
T Consensus 61 ~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~------~~~l--~~~~~~~~~SPDG-~~la~~~-~~ 130 (719)
T 1z68_A 61 NASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVR------GNEL--PRPIQYLCWSPVG-SKLAYVY-QN 130 (719)
T ss_dssp TCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECC------SSCC--CSSBCCEEECSST-TCEEEEE-TT
T ss_pred ceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCcccc------ceec--CcccccceECCCC-CEEEEEE-CC
Confidence 3889999999999999887 7999999988762100 0111 2458899999965 5788876 89
Q ss_pred cEEEEECCCCcEEEE--------E-----------------EEEeecCCceEEEecCccc
Q 004989 680 VVQVGQVLHLIYFSA--------L-----------------YCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 680 ~v~lWD~~tg~~~~~--------v-----------------~~v~~~~~~~~~~~~~~~~ 714 (720)
+|++||+.+|++.+. + .+++|||.+..++++++|+
T Consensus 131 ~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~ 190 (719)
T 1z68_A 131 NIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFND 190 (719)
T ss_dssp EEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEEC
T ss_pred eEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECC
Confidence 999999999887542 2 3899999999999999873
No 393
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.30 E-value=1.6e-06 Score=101.76 Aligned_cols=108 Identities=8% Similarity=-0.028 Sum_probs=76.5
Q ss_pred CCCeEEEEECCCCCEEEEeeC-CC-----cEEEeeCCcccccc-cccc--cc-----------eEE---ecCCCCEEEEE
Q 004989 607 SNLVCSLSFDRDGELFAAAGV-NK-----KIKVFECDAIINEN-RDIH--YP-----------VVE---MASRSKLSSIC 663 (720)
Q Consensus 607 ~~~V~sv~f~~dg~~lat~~~-d~-----~i~iwd~~~~~~~~-~~~~--~~-----------~~~---~~~~~~i~~l~ 663 (720)
...|.+++|+|||++||+++. |+ +|++||..++.... ...+ .| ..+ +.+...|.+++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 456899999999999999998 88 99999987752110 0000 00 000 00002378999
Q ss_pred EecCCCCEEEEEeCCCcEEEEECCCC---cEEE------EEEEEeecCCceEEEecCccceE
Q 004989 664 WNSYIKSQIASSNFEGVVQVGQVLHL---IYFS------ALYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 664 w~~~~~~~laS~s~D~~v~lWD~~tg---~~~~------~v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
|||++ .+||+++. ++|.+||+.++ +... .+.+++|+|.+..+++++-+.+.
T Consensus 116 ~SpDg-~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~~~i~ 175 (741)
T 2ecf_A 116 WSPDA-QRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRGRNLW 175 (741)
T ss_dssp ECTTS-SEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEETTEEE
T ss_pred ECCCC-CEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeCCcEE
Confidence 99965 58888875 99999999998 4332 18899999999998888755543
No 394
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=98.26 E-value=4.3e-06 Score=87.22 Aligned_cols=111 Identities=9% Similarity=-0.023 Sum_probs=75.4
Q ss_pred ceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEee-CCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCC
Q 004989 591 KLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAG-VNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIK 669 (720)
Q Consensus 591 ~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~ 669 (720)
+++.+..+.. ...+.+++|+|||++|++++ .+++|.+||+..+. ...++..+.....+.+++|+|++.
T Consensus 73 ~~~~~~~~~~------~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~-----~~~~~~~~~~~~~~~~~~~s~dg~ 141 (343)
T 1ri6_A 73 ALTFAAESAL------PGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGL-----PVGVVDVVEGLDGCHSANISPDNR 141 (343)
T ss_dssp CEEEEEEEEC------SSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTE-----EEEEEEEECCCTTBCCCEECTTSS
T ss_pred ceeecccccc------CCCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCc-----cccccccccCCCCceEEEECCCCC
Confidence 4555566553 23678999999999776555 48999999984210 012334444556799999999754
Q ss_pred CEEEEEe-CCCcEEEEECCC-CcEEE------------EEEEEeecCCce-EEEecCcc
Q 004989 670 SQIASSN-FEGVVQVGQVLH-LIYFS------------ALYCIVLNKLLI-IFRYGMFQ 713 (720)
Q Consensus 670 ~~laS~s-~D~~v~lWD~~t-g~~~~------------~v~~v~~~~~~~-~~~~~~~~ 713 (720)
+|++++ .|+.|.+||+.+ |+... .+.+++|+|.+. ++..+..+
T Consensus 142 -~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~ 199 (343)
T 1ri6_A 142 -TLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELN 199 (343)
T ss_dssp -EEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTT
T ss_pred -EEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCC
Confidence 566665 899999999988 65421 156789999987 44444333
No 395
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=98.24 E-value=1.1e-06 Score=100.39 Aligned_cols=98 Identities=11% Similarity=-0.091 Sum_probs=74.4
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCC--cEEEeeCCcccccccccccceEEec-CCCCEEEEE--------EecCCCCE
Q 004989 603 LLNSSNLVCSLSFDRDGELFAAAGVNK--KIKVFECDAIINENRDIHYPVVEMA-SRSKLSSIC--------WNSYIKSQ 671 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~--~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~l~--------w~~~~~~~ 671 (720)
+.+|...+.+++|+|||++||+++.++ +|++||+.++.. . .+. +...+..++ |+|++ .+
T Consensus 190 l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~--------~-~~~~~~~~~~~~~~~~~~~~~~spdg-~~ 259 (582)
T 3o4h_A 190 FDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSV--------E-DLELPSKDFSSYRPTAITWLGYLPDG-RL 259 (582)
T ss_dssp ECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCE--------E-ECCCSCSHHHHHCCSEEEEEEECTTS-CE
T ss_pred eecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcE--------E-EccCCCcChhhhhhccccceeEcCCC-cE
Confidence 345678899999999999999988898 999999876521 1 111 123344455 99987 79
Q ss_pred EEEEeCCCcEEEEECCCCcEEEE----EEEEeecCCceEEEecCcc
Q 004989 672 IASSNFEGVVQVGQVLHLIYFSA----LYCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 672 laS~s~D~~v~lWD~~tg~~~~~----v~~v~~~~~~~~~~~~~~~ 713 (720)
+++++.|++++||++ |+.+.. +.+++|+ .+..+.+++-+
T Consensus 260 ~~~~~~~g~~~l~~~--g~~~~~~~~~v~~~~~s-dg~~l~~~s~~ 302 (582)
T 3o4h_A 260 AVVARREGRSAVFID--GERVEAPQGNHGRVVLW-RGKLVTSHTSL 302 (582)
T ss_dssp EEEEEETTEEEEEET--TEEECCCSSEEEEEEEE-TTEEEEEEEET
T ss_pred EEEEEcCCcEEEEEE--CCeeccCCCceEEEEec-CCEEEEEEcCC
Confidence 999999999999999 776633 7899999 77766655443
No 396
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=98.24 E-value=1.1e-05 Score=85.16 Aligned_cols=100 Identities=12% Similarity=-0.082 Sum_probs=70.7
Q ss_pred CCCeEEEEECCCCCEEEEee-CCCcEEEeeCCcccccccccccceEEecC----------CCCEEEEEEecCCCCEEEEE
Q 004989 607 SNLVCSLSFDRDGELFAAAG-VNKKIKVFECDAIINENRDIHYPVVEMAS----------RSKLSSICWNSYIKSQIASS 675 (720)
Q Consensus 607 ~~~V~sv~f~~dg~~lat~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~----------~~~i~~l~w~~~~~~~laS~ 675 (720)
...+..|+|+|||++|++++ .+++|++||+..... . .++..+.. ...+.+++|+|+++ +++++
T Consensus 85 ~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~-~----~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~ 158 (347)
T 3hfq_A 85 GTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGA-L----TLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVID 158 (347)
T ss_dssp SCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSC-E----EEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEE
T ss_pred CCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCC-e----eecceeecCCCCCCccccCCCceEEEECCCCc-EEEEe
Confidence 56789999999999888887 789999999853100 0 12222211 23488999999876 77777
Q ss_pred eCCCcEEEEECC-CCcEEEE----------EEEEeecCCce-EEEecCc
Q 004989 676 NFEGVVQVGQVL-HLIYFSA----------LYCIVLNKLLI-IFRYGMF 712 (720)
Q Consensus 676 s~D~~v~lWD~~-tg~~~~~----------v~~v~~~~~~~-~~~~~~~ 712 (720)
..++.|.+||+. +|+.... ...++|+|.+. ++..+..
T Consensus 159 ~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~ 207 (347)
T 3hfq_A 159 LGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGEL 207 (347)
T ss_dssp TTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETT
T ss_pred CCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCC
Confidence 779999999998 6654321 45689999987 5554443
No 397
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=98.21 E-value=1.4e-06 Score=99.46 Aligned_cols=94 Identities=10% Similarity=-0.142 Sum_probs=74.3
Q ss_pred EEEEECCCCCEEEEeeCC----CcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCC--cEEEE
Q 004989 611 CSLSFDRDGELFAAAGVN----KKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEG--VVQVG 684 (720)
Q Consensus 611 ~sv~f~~dg~~lat~~~d----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~--~v~lW 684 (720)
.+++|||||++||+++.| +.|++||+.++. ......+...+..++|||++ .+||+++.|+ +|.+|
T Consensus 153 ~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~--------~~~l~~~~~~~~~~~~SpDG-~~l~~~~~~~~~~i~~~ 223 (582)
T 3o4h_A 153 FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGG--------LRVFDSGEGSFSSASISPGM-KVTAGLETAREARLVTV 223 (582)
T ss_dssp CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCC--------CEEECCSSCEEEEEEECTTS-CEEEEEECSSCEEEEEE
T ss_pred ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCC--------ceEeecCCCccccceECCCC-CEEEEccCCCeeEEEEE
Confidence 799999999999998888 889999987652 12222345678999999965 5888888899 99999
Q ss_pred ECCCCcEEEE-------EEEEe--------ecCCceEEEecCccc
Q 004989 685 QVLHLIYFSA-------LYCIV--------LNKLLIIFRYGMFQE 714 (720)
Q Consensus 685 D~~tg~~~~~-------v~~v~--------~~~~~~~~~~~~~~~ 714 (720)
|+.+|+.. . +.+++ |+|.+.++.+++-|.
T Consensus 224 d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g 267 (582)
T 3o4h_A 224 DPRDGSVE-DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREG 267 (582)
T ss_dssp CTTTCCEE-ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETT
T ss_pred cCCCCcEE-EccCCCcChhhhhhccccceeEcCCCcEEEEEEcCC
Confidence 99999877 4 34566 999997777766554
No 398
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=98.21 E-value=1.1e-05 Score=84.21 Aligned_cols=116 Identities=10% Similarity=0.033 Sum_probs=78.6
Q ss_pred hccccceEEeeeeccCCCCCCCCCeEEEEECCCCCE-EEEeeCCCc-EEEeeCCcccccccccccceEEecCCCCEEEEE
Q 004989 586 YLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGEL-FAAAGVNKK-IKVFECDAIINENRDIHYPVVEMASRSKLSSIC 663 (720)
Q Consensus 586 ~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~-lat~~~d~~-i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~ 663 (720)
.+...+.+++..+.. ...+.+++|+|||++ ++++..+++ |.+||+.... ...+.. ...+.......+++
T Consensus 112 v~d~~~~~~~~~~~~------~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g-~~~~~~--~~~~~~~~~~~~~~ 182 (331)
T 3u4y_A 112 SYSFLKNKFISTIPI------PYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADG-VLFDTG--QEFISGGTRPFNIT 182 (331)
T ss_dssp EEETTTTEEEEEEEC------CTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTC-CEEEEE--EEEECSSSSEEEEE
T ss_pred EEECCCCCeEEEEEC------CCCccceEECCCCCEEEEEecCCCceEEEEEECCCC-cEeecC--CccccCCCCccceE
Confidence 334445555665553 345689999999985 556566688 9999987421 011110 12233345689999
Q ss_pred EecCCCCEEEEEeCCCcEEEEECCCCcE---EEE------EEEEeecCCce-EEEec
Q 004989 664 WNSYIKSQIASSNFEGVVQVGQVLHLIY---FSA------LYCIVLNKLLI-IFRYG 710 (720)
Q Consensus 664 w~~~~~~~laS~s~D~~v~lWD~~tg~~---~~~------v~~v~~~~~~~-~~~~~ 710 (720)
|+|+++.+++++..+++|.+||+.+++. +.+ +.+++|+|.+. ++..+
T Consensus 183 ~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~ 239 (331)
T 3u4y_A 183 FTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTNNLPGTIVVSRDGSTVYVLT 239 (331)
T ss_dssp ECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECSSCCCCEEECTTSSEEEEEC
T ss_pred ECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCCCCCceEEECCCCCEEEEEE
Confidence 9997654666777799999999999998 665 46789999988 34443
No 399
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=98.20 E-value=1.8e-06 Score=100.98 Aligned_cols=98 Identities=8% Similarity=-0.105 Sum_probs=75.0
Q ss_pred CeEEEEECCCCCEEEEeeCC---------CcEEEeeCCcccccccccccceEEec-CCCCEEEEEEecCCCCEEEEEeCC
Q 004989 609 LVCSLSFDRDGELFAAAGVN---------KKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFE 678 (720)
Q Consensus 609 ~V~sv~f~~dg~~lat~~~d---------~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~l~w~~~~~~~laS~s~D 678 (720)
.|.+++|||||++||+++.+ +.|.|||+.++... ++.... +...+.+++|||++ ++||+++.
T Consensus 62 ~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~------~l~~~~~~~~~~~~~~~SPdG-~~la~~~~- 133 (723)
T 1xfd_A 62 RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQ------SLDPPEVSNAKLQYAGWGPKG-QQLIFIFE- 133 (723)
T ss_dssp TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCE------ECCCTTCCSCCCSBCCBCSST-TCEEEEET-
T ss_pred ccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceE------eccCCccccccccccEECCCC-CEEEEEEC-
Confidence 58999999999999999875 67889998775210 111111 23348899999965 57888874
Q ss_pred CcEEEEECCCCcEEEE-------E------------------EEEeecCCceEEEecCccc
Q 004989 679 GVVQVGQVLHLIYFSA-------L------------------YCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 679 ~~v~lWD~~tg~~~~~-------v------------------~~v~~~~~~~~~~~~~~~~ 714 (720)
+.|.+||+.+|+..+. + .+++|||.+..+++++.|+
T Consensus 134 ~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~ 194 (723)
T 1xfd_A 134 NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAIND 194 (723)
T ss_dssp TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEEC
T ss_pred CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECC
Confidence 8999999999877653 1 5799999999999988774
No 400
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=98.20 E-value=3.8e-06 Score=95.65 Aligned_cols=89 Identities=7% Similarity=-0.058 Sum_probs=73.1
Q ss_pred ECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEEC--CCCcEE
Q 004989 615 FDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQV--LHLIYF 692 (720)
Q Consensus 615 f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~--~tg~~~ 692 (720)
|+|+|.++++++.|++|.+||..++ ..+..+.....+.+++|+|+ +.+|++++.|++|++||+ .|++++
T Consensus 145 ~~p~~~~~vs~~~d~~V~v~D~~t~--------~~~~~i~~g~~~~~v~~spd-g~~l~v~~~d~~V~v~D~~~~t~~~~ 215 (543)
T 1nir_A 145 LDLPNLFSVTLRDAGQIALVDGDSK--------KIVKVIDTGYAVHISRMSAS-GRYLLVIGRDARIDMIDLWAKEPTKV 215 (543)
T ss_dssp CCGGGEEEEEEGGGTEEEEEETTTC--------CEEEEEECSTTEEEEEECTT-SCEEEEEETTSEEEEEETTSSSCEEE
T ss_pred cCCCCEEEEEEcCCCeEEEEECCCc--------eEEEEEecCcccceEEECCC-CCEEEEECCCCeEEEEECcCCCCcEE
Confidence 8999999999999999999998776 23444443334899999996 469999999999999999 899988
Q ss_pred EE------EEEEeecC----CceEEEecCc
Q 004989 693 SA------LYCIVLNK----LLIIFRYGMF 712 (720)
Q Consensus 693 ~~------v~~v~~~~----~~~~~~~~~~ 712 (720)
.+ ..+++|+| .+..+..+++
T Consensus 216 ~~i~~g~~p~~va~sp~~~~dg~~l~v~~~ 245 (543)
T 1nir_A 216 AEIKIGIEARSVESSKFKGYEDRYTIAGAY 245 (543)
T ss_dssp EEEECCSEEEEEEECCSTTCTTTEEEEEEE
T ss_pred EEEecCCCcceEEeCCCcCCCCCEEEEEEc
Confidence 87 57899999 8876665553
No 401
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=98.19 E-value=7.7e-07 Score=104.09 Aligned_cols=98 Identities=8% Similarity=-0.055 Sum_probs=74.3
Q ss_pred CeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCC----CEEEEEEecCCCCEEEEEeCC------
Q 004989 609 LVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRS----KLSSICWNSYIKSQIASSNFE------ 678 (720)
Q Consensus 609 ~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~----~i~~l~w~~~~~~~laS~s~D------ 678 (720)
.+.+++|+|||+++++ +.|++|++||..++. ....+.++. .|.+++|||++ ++||+++.|
T Consensus 18 ~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~--------~~~~~~~~~~~~~~v~~~~~SpDg-~~l~~~~~~~~~~~~ 87 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYR-EQKGTVRLWNVETNT--------STVLIEGKKIESLRAIRYEISPDR-EYALFSYNVEPIYQH 87 (723)
T ss_dssp CCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCC--------CEEEECTTTTTTTTCSEEEECTTS-SEEEEEESCCCCSSS
T ss_pred cccccEEcCCCcEEEE-eCCCCEEEEECCCCc--------EEEEeccccccccccceEEECCCC-CEEEEEecCccceee
Confidence 4678999999998877 789999999987762 222333322 48999999964 588888764
Q ss_pred ---CcEEEEECCCCcEEE--E-------EEEEeecCCceEEEecCccceE
Q 004989 679 ---GVVQVGQVLHLIYFS--A-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 679 ---~~v~lWD~~tg~~~~--~-------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
+.|.|||+.+|+... . +.+++|||.+..+++++-..+.
T Consensus 88 ~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~~~i~ 137 (723)
T 1xfd_A 88 SYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFENNIY 137 (723)
T ss_dssp CCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEETTEEE
T ss_pred cceeeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEECCeEE
Confidence 778899999998622 1 5678999999988887765443
No 402
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=98.18 E-value=6e-06 Score=85.85 Aligned_cols=78 Identities=9% Similarity=-0.039 Sum_probs=63.4
Q ss_pred CCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEEC
Q 004989 607 SNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQV 686 (720)
Q Consensus 607 ~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~ 686 (720)
...+.+++|+|||++++++ +++|.+||+.+. ..+..+.....+.+++|+|++ ++|++++.|+.|++||+
T Consensus 240 ~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~--------~~~~~~~~~~~~~~~~~s~dg-~~l~~~~~~~~i~v~d~ 308 (337)
T 1pby_B 240 DVFYFSTAVNPAKTRAFGA--YNVLESFDLEKN--------ASIKRVPLPHSYYSVNVSTDG-STVWLGGALGDLAAYDA 308 (337)
T ss_dssp SSCEEEEEECTTSSEEEEE--ESEEEEEETTTT--------EEEEEEECSSCCCEEEECTTS-CEEEEESBSSEEEEEET
T ss_pred CCceeeEEECCCCCEEEEe--CCeEEEEECCCC--------cCcceecCCCceeeEEECCCC-CEEEEEcCCCcEEEEEC
Confidence 4678899999999998888 799999998765 233334344568899999965 57787888999999999
Q ss_pred CCCcEEEEE
Q 004989 687 LHLIYFSAL 695 (720)
Q Consensus 687 ~tg~~~~~v 695 (720)
.+++.+.++
T Consensus 309 ~~~~~~~~~ 317 (337)
T 1pby_B 309 ETLEKKGQV 317 (337)
T ss_dssp TTCCEEEEE
T ss_pred cCCcEEEEE
Confidence 999988764
No 403
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.17 E-value=1.8e-06 Score=92.71 Aligned_cols=103 Identities=13% Similarity=0.151 Sum_probs=76.3
Q ss_pred hchhhhhhcccCC--CCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGD--HLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 63 r~~~e~~~L~~l~--HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
+..+|..+|..+. +..+.+++. ++.+.......|+|||| .|..|.+.. ...++..+...++.+++..|..||+
T Consensus 82 ~~~~E~~~l~~L~~~~vpvP~~~~-~~~~~~~~g~~~~vme~v~G~~l~~~~---~~~l~~~~~~~~~~~l~~~La~LH~ 157 (359)
T 3dxp_A 82 AIEREYRVMDALAGTDVPVAKMYA-LCEDESVIGRAFYIMEFVSGRVLWDQS---LPGMSPAERTAIYDEMNRVIAAMHT 157 (359)
T ss_dssp CHHHHHHHHHHHTTSSSCCCCEEE-EECCTTTTSSCEEEEECCCCBCCCCTT---CTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcCCCCCCcEEE-ECCCCCccCCeEEEEEecCCeecCCCc---cccCCHHHHHHHHHHHHHHHHHHhC
Confidence 3345666776665 445677777 55454433457899999 777764311 2237888999999999999999997
Q ss_pred ----------------------------------------------------------CCceeccCCCCcEEEccCCc--
Q 004989 140 ----------------------------------------------------------QGIVVHNVRPSCFVMSSFNH-- 159 (720)
Q Consensus 140 ----------------------------------------------------------~gIvHrDLKP~NILl~~~~~-- 159 (720)
.+++|+|++|.|||++.++.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v 237 (359)
T 3dxp_A 158 VDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRV 237 (359)
T ss_dssp SCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCE
T ss_pred CCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcE
Confidence 36899999999999997653
Q ss_pred eEEeecCccc
Q 004989 160 VSFIESASCS 169 (720)
Q Consensus 160 vkliDfg~a~ 169 (720)
+.++||+.+.
T Consensus 238 ~~viDwe~a~ 247 (359)
T 3dxp_A 238 LAVLDWELST 247 (359)
T ss_dssp EEECCCTTCE
T ss_pred EEEECccccc
Confidence 6899999873
No 404
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.16 E-value=3.2e-06 Score=99.12 Aligned_cols=99 Identities=4% Similarity=-0.147 Sum_probs=75.7
Q ss_pred CCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEECC
Q 004989 608 NLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVL 687 (720)
Q Consensus 608 ~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~~ 687 (720)
..|.+++|+|||++||+++. ++|++||+.+.... .......+...+.+++|||++ ++||+++ ++.|.+||+.
T Consensus 109 ~~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~-----~~~~l~~~~~~~~~~~~SPDG-~~la~~~-~~~i~~~d~~ 180 (741)
T 2ecf_A 109 TGIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKA-----AVRQLTHGEGFATDAKLSPKG-GFVSFIR-GRNLWVIDLA 180 (741)
T ss_dssp EESCCCEECTTSSEEEEEET-TEEEEEESSSCSTT-----SCCBCCCSSSCEEEEEECTTS-SEEEEEE-TTEEEEEETT
T ss_pred cCcceeEECCCCCEEEEEeC-CcEEEEECCCCCcc-----eEEEcccCCcccccccCCCCC-CEEEEEe-CCcEEEEecC
Confidence 34789999999999999886 99999998765100 011111234679999999965 5888887 5799999999
Q ss_pred CCcEEEE-----------------------EEEEeecCCceEEEecCccc
Q 004989 688 HLIYFSA-----------------------LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 688 tg~~~~~-----------------------v~~v~~~~~~~~~~~~~~~~ 714 (720)
+|+.... +.+++|||.+..+.+++.|.
T Consensus 181 ~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~ 230 (741)
T 2ecf_A 181 SGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDE 230 (741)
T ss_dssp TTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEEC
T ss_pred CCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcC
Confidence 9877653 26789999999999888764
No 405
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.15 E-value=2.2e-06 Score=100.05 Aligned_cols=106 Identities=12% Similarity=-0.036 Sum_probs=73.5
Q ss_pred CCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCc-----ccccc-cccccc-eEE-----ecCCCCEEEEEEecCCCCEEE
Q 004989 606 SSNLVCSLSFDRDGELFAAAGVNKKIKVFECDA-----IINEN-RDIHYP-VVE-----MASRSKLSSICWNSYIKSQIA 673 (720)
Q Consensus 606 ~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~-----~~~~~-~~~~~~-~~~-----~~~~~~i~~l~w~~~~~~~la 673 (720)
+...|.+++|+|||++||++ .|+.|+|||+.+ +.... ...+.. +.. -.....+.+++|||++ .+||
T Consensus 119 ~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg-~~la 196 (706)
T 2z3z_A 119 TNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKG-SCLA 196 (706)
T ss_dssp CTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTS-SEEE
T ss_pred CcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCC-CEEE
Confidence 45678899999999999995 689999999876 41110 000000 000 0001125899999965 5888
Q ss_pred EEe---------------------------------CCCcEEEEECCCCcEEEE---------EEEEeecCCceEEEecC
Q 004989 674 SSN---------------------------------FEGVVQVGQVLHLIYFSA---------LYCIVLNKLLIIFRYGM 711 (720)
Q Consensus 674 S~s---------------------------------~D~~v~lWD~~tg~~~~~---------v~~v~~~~~~~~~~~~~ 711 (720)
+++ .+..|.+||+.+|+.... +.+++|+|.+..+.+++
T Consensus 197 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~ 276 (706)
T 2z3z_A 197 FYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAE 276 (706)
T ss_dssp EEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEE
T ss_pred EEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEE
Confidence 887 346899999999976432 78999999999888766
Q ss_pred cc
Q 004989 712 FQ 713 (720)
Q Consensus 712 ~~ 713 (720)
.+
T Consensus 277 ~~ 278 (706)
T 2z3z_A 277 VN 278 (706)
T ss_dssp EC
T ss_pred eC
Confidence 55
No 406
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=98.15 E-value=9.5e-07 Score=103.48 Aligned_cols=96 Identities=5% Similarity=0.018 Sum_probs=72.6
Q ss_pred EEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCC----CEEEEEEecCCCCEEEEEeC---------
Q 004989 611 CSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRS----KLSSICWNSYIKSQIASSNF--------- 677 (720)
Q Consensus 611 ~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~----~i~~l~w~~~~~~~laS~s~--------- 677 (720)
.+++|+|||++++++ .|++|++||..++. +...+.++. .|.+++|||++ ++||+++.
T Consensus 19 ~~~~~s~dg~~~~~~-~d~~i~~~~~~~g~--------~~~~~~~~~~~~~~~~~~~~SpDg-~~la~~~~~~~~~~~s~ 88 (719)
T 1z68_A 19 FFPNWISGQEYLHQS-ADNNIVLYNIETGQ--------SYTILSNRTMKSVNASNYGLSPDR-QFVYLESDYSKLWRYSY 88 (719)
T ss_dssp CCCEESSSSEEEEEC-TTSCEEEEESSSCC--------EEEEECHHHHHTTTCSEEEECTTS-SEEEEEEEEEECSSSCE
T ss_pred CccEECCCCeEEEEc-CCCCEEEEEcCCCc--------EEEEEccccccccceeeEEECCCC-CeEEEEecCceeEEeec
Confidence 378999999877776 59999999987762 222222221 38999999965 58887765
Q ss_pred CCcEEEEECCCCcEE---E---EEEEEeecCCceEEEecCccceE
Q 004989 678 EGVVQVGQVLHLIYF---S---ALYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 678 D~~v~lWD~~tg~~~---~---~v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
|++|+|||+.+|+.+ . .+.+++|||.+..+++++-..+.
T Consensus 89 ~~~i~~~d~~~g~~~~~~~l~~~~~~~~~SPDG~~la~~~~~~i~ 133 (719)
T 1z68_A 89 TATYYIYDLSNGEFVRGNELPRPIQYLCWSPVGSKLAYVYQNNIY 133 (719)
T ss_dssp EEEEEEEETTTTEECCSSCCCSSBCCEEECSSTTCEEEEETTEEE
T ss_pred ceEEEEEECCCCccccceecCcccccceECCCCCEEEEEECCeEE
Confidence 799999999999873 2 17889999999988887644443
No 407
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=98.15 E-value=1.5e-05 Score=83.59 Aligned_cols=111 Identities=8% Similarity=-0.003 Sum_probs=76.4
Q ss_pred cceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEe-eCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCC
Q 004989 590 SKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAA-GVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYI 668 (720)
Q Consensus 590 ~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~ 668 (720)
.+.+++..+..+ -.++...+.+++|+|||++++.+ ..++.|.+||..+.. .+..+.... -.+++|+|++
T Consensus 214 ~~~~~~~~~~~~-~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~--------~~~~~~~~~-~~~~~~s~dg 283 (353)
T 3vgz_A 214 ADNKILSRKKLL-DDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGN--------ILAKVAAPE-SLAVLFNPAR 283 (353)
T ss_dssp TTTEEEEEEECC-CSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCC--------EEEEEECSS-CCCEEEETTT
T ss_pred CCCeEEEEEEcC-CCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCc--------EEEEEEcCC-CceEEECCCC
Confidence 344555554421 12345678999999999965544 456999999987651 222222222 2579999976
Q ss_pred CCEEEEEeCCCcEEEEECCCCcEEEE------EEEEeecCCce-EEEec
Q 004989 669 KSQIASSNFEGVVQVGQVLHLIYFSA------LYCIVLNKLLI-IFRYG 710 (720)
Q Consensus 669 ~~~laS~s~D~~v~lWD~~tg~~~~~------v~~v~~~~~~~-~~~~~ 710 (720)
+.+++++..|++|.+||+.+++.+.. .++++|++.+. ++.++
T Consensus 284 ~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~ 332 (353)
T 3vgz_A 284 NEAYVTHRQAGKVSVIDAKSYKVVKTFDTPTHPNSLALSADGKTLYVSV 332 (353)
T ss_dssp TEEEEEETTTTEEEEEETTTTEEEEEEECCSEEEEEEECTTSCEEEEEE
T ss_pred CEEEEEECCCCeEEEEECCCCeEEEEEecCCCCCeEEEcCCCCEEEEEE
Confidence 65566666799999999999998876 68899999887 44443
No 408
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=98.14 E-value=1.6e-05 Score=82.95 Aligned_cols=113 Identities=10% Similarity=0.022 Sum_probs=75.0
Q ss_pred hccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEe-eCCCcEEEeeCCcccccccccccceEEecCCCC-EEEEE
Q 004989 586 YLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAA-GVNKKIKVFECDAIINENRDIHYPVVEMASRSK-LSSIC 663 (720)
Q Consensus 586 ~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-i~~l~ 663 (720)
.+...+.+++..+.. +...+ +++|+|||++++++ ..+++|.+||..+.. .+...+..... ..+++
T Consensus 24 ~~d~~~~~~~~~~~~-----~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~-------~~~~~~~~~~~~~~~~~ 90 (331)
T 3u4y_A 24 FFSTDTLEILNQITL-----GYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEP-------PKVVAIQEGQSSMADVD 90 (331)
T ss_dssp EEETTTCCEEEEEEC-----CCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSS-------CEEEEEEECSSCCCCEE
T ss_pred EEeCcccceeeeEEc-----cCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCc-------eeEEecccCCCCccceE
Confidence 333444555555542 13445 99999999965544 448999999987652 11333333333 44499
Q ss_pred EecCCCCEEEEEeCC-C--cEEEEECCCCcEEEE------EEEEeecCCce-EEEecCc
Q 004989 664 WNSYIKSQIASSNFE-G--VVQVGQVLHLIYFSA------LYCIVLNKLLI-IFRYGMF 712 (720)
Q Consensus 664 w~~~~~~~laS~s~D-~--~v~lWD~~tg~~~~~------v~~v~~~~~~~-~~~~~~~ 712 (720)
|+|++ .+|+++..+ + +|.+||+.+++.+.. ..+++|+|.+. ++..+..
T Consensus 91 ~s~dg-~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~ 148 (331)
T 3u4y_A 91 ITPDD-QFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRS 148 (331)
T ss_dssp ECTTS-SEEEECCCSSSSCEEEEEETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEET
T ss_pred ECCCC-CEEEEecCCCCcccEEEEECCCCCeEEEEECCCCccceEECCCCCEEEEEecC
Confidence 99965 577755444 2 999999999998876 57899999986 5554443
No 409
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=98.12 E-value=7.1e-06 Score=85.26 Aligned_cols=109 Identities=8% Similarity=-0.017 Sum_probs=75.9
Q ss_pred ccccceEEeeeeccCCCCCCCC-CeEEEEECCCCCE-EEEeeCCCcEEEeeCCcccccccccccceEEecCC------CC
Q 004989 587 LSFSKLRVKADLNQGDLLNSSN-LVCSLSFDRDGEL-FAAAGVNKKIKVFECDAIINENRDIHYPVVEMASR------SK 658 (720)
Q Consensus 587 ~~~~~~~~~~~l~~~~~~~~~~-~V~sv~f~~dg~~-lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~------~~ 658 (720)
+...+.+++..+..+ +.. .+.+++|+|||++ +++++.++.|.+||..++. .+..+... ..
T Consensus 16 ~d~~~~~~~~~~~~~----~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~--------~~~~~~~~~~~~~~~~ 83 (337)
T 1pby_B 16 IDTEKMAVDKVITIA----DAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGE--------TLGRIDLSTPEERVKS 83 (337)
T ss_dssp EETTTTEEEEEEECT----TCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCC--------EEEEEECCBTTEEEEC
T ss_pred EECCCCcEEEEEEcC----CCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCC--------eEeeEEcCCccccccc
Confidence 334455666666531 111 4788999999975 5777778999999987651 22222211 15
Q ss_pred EEEEEEecCCCCEEEEEe------------CCCcEEEEECCCCcEEEE------EEEEeecCCceEEE
Q 004989 659 LSSICWNSYIKSQIASSN------------FEGVVQVGQVLHLIYFSA------LYCIVLNKLLIIFR 708 (720)
Q Consensus 659 i~~l~w~~~~~~~laS~s------------~D~~v~lWD~~tg~~~~~------v~~v~~~~~~~~~~ 708 (720)
+.+++|+|++ .+|+.++ .|+.|.+||+.+++.+.. +.+++|++.+..+.
T Consensus 84 ~~~~~~s~dg-~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~ 150 (337)
T 1pby_B 84 LFGAALSPDG-KTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLY 150 (337)
T ss_dssp TTCEEECTTS-SEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEE
T ss_pred ccceEECCCC-CEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCCcceeEECCCCCEEE
Confidence 6789999965 4777775 579999999999988776 46788998886443
No 410
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=98.07 E-value=3.4e-05 Score=80.85 Aligned_cols=109 Identities=8% Similarity=0.133 Sum_probs=78.3
Q ss_pred cceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-----CCCCEEEEEE
Q 004989 590 SKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-----SRSKLSSICW 664 (720)
Q Consensus 590 ~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-----~~~~i~~l~w 664 (720)
.+.+++..+. .+...+.+++|+|||+++++++.++.|.+||..+.. .+..+. ....+.+++|
T Consensus 172 ~~~~~~~~~~-----~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~--------~~~~~~~~~~~~~~~~~~~~~ 238 (353)
T 3vgz_A 172 GNIKLKTAIQ-----NTGKMSTGLALDSEGKRLYTTNADGELITIDTADNK--------ILSRKKLLDDGKEHFFINISL 238 (353)
T ss_dssp TTTEEEEEEC-----CCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTE--------EEEEEECCCSSSCCCEEEEEE
T ss_pred CCCceEEEec-----CCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCe--------EEEEEEcCCCCCCcccceEEE
Confidence 3455555554 124557899999999999999999999999987652 121111 2345889999
Q ss_pred ecCCCCEEEEEeCCCcEEEEECCCCcEEEEE-----EEEeecCCce-EEEecC
Q 004989 665 NSYIKSQIASSNFEGVVQVGQVLHLIYFSAL-----YCIVLNKLLI-IFRYGM 711 (720)
Q Consensus 665 ~~~~~~~laS~s~D~~v~lWD~~tg~~~~~v-----~~v~~~~~~~-~~~~~~ 711 (720)
+|+++.+++++..++.|.+||+.+++.+..+ .+++|++.+. ++..+.
T Consensus 239 s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~ 291 (353)
T 3vgz_A 239 DTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPESLAVLFNPARNEAYVTHR 291 (353)
T ss_dssp ETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSSCCCEEEETTTTEEEEEET
T ss_pred CCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCceEEECCCCCEEEEEEC
Confidence 9976644555555699999999999988774 4788888876 455543
No 411
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=98.05 E-value=6.7e-06 Score=96.28 Aligned_cols=101 Identities=10% Similarity=0.021 Sum_probs=75.0
Q ss_pred CCCCCeEEEEECCCCCEEE-----EeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCC
Q 004989 605 NSSNLVCSLSFDRDGELFA-----AAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEG 679 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~~la-----t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~ 679 (720)
+|...+.+++|||||++|| +|+.+.+|+|||+.++.....+ + +. ..+...++|+|++ ..|+.+++|.
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~-~-----~~-~~~~~~~~wspDg-~~l~~~~~d~ 189 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVD-V-----IE-GGKYATPKWTPDS-KGFYYEWLPT 189 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSC-C-----BS-CCTTCCCEECTTS-SEEEEEECCC
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCc-c-----cC-cccccceEEecCC-CEEEEEEecC
Confidence 3456789999999999999 6677789999999876311000 1 11 1223689999965 5889888888
Q ss_pred c-------------EEEEECCCCc----EEEE-------EEEEeecCCceEEEecCcc
Q 004989 680 V-------------VQVGQVLHLI----YFSA-------LYCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 680 ~-------------v~lWD~~tg~----~~~~-------v~~v~~~~~~~~~~~~~~~ 713 (720)
+ |++||+.|++ .+.+ +.++.|++.+..+...+.+
T Consensus 190 ~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~ 247 (695)
T 2bkl_A 190 DPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILR 247 (695)
T ss_dssp CTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEE
T ss_pred CCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeC
Confidence 7 9999999987 4432 6789999999887776654
No 412
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=98.02 E-value=6.9e-06 Score=96.92 Aligned_cols=121 Identities=11% Similarity=0.094 Sum_probs=82.4
Q ss_pred hhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCc---------EEEeeCCcccccccccccceEEecC
Q 004989 585 KYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKK---------IKVFECDAIINENRDIHYPVVEMAS 655 (720)
Q Consensus 585 ~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~---------i~iwd~~~~~~~~~~~~~~~~~~~~ 655 (720)
..+...+-+....+....+..+.....+++|||||++||.++.+++ +.|||+.++.... ...+
T Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~--------l~~~ 110 (740)
T 4a5s_A 39 LVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLIT--------EERI 110 (740)
T ss_dssp EEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECC--------SSCC
T ss_pred EEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEE--------cccC
Confidence 3344444443333443333333333456899999999999998744 5699998762111 1123
Q ss_pred CCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE--------EE-----------------EEeecCCceEEEec
Q 004989 656 RSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA--------LY-----------------CIVLNKLLIIFRYG 710 (720)
Q Consensus 656 ~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~--------v~-----------------~v~~~~~~~~~~~~ 710 (720)
...+..++|||++ +.||.++ |+.|.+||+.+|+..+- ++ .+.|||++..+++.
T Consensus 111 ~~~~~~~~~SPdG-~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~ 188 (740)
T 4a5s_A 111 PNNTQWVTWSPVG-HKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYA 188 (740)
T ss_dssp CTTEEEEEECSST-TCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEE
T ss_pred CCcceeeEECCCC-CEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEE
Confidence 5579999999965 5788875 79999999999876542 21 37899999999999
Q ss_pred Cccce
Q 004989 711 MFQEV 715 (720)
Q Consensus 711 ~~~~~ 715 (720)
++|+-
T Consensus 189 ~~d~~ 193 (740)
T 4a5s_A 189 QFNDT 193 (740)
T ss_dssp EEECT
T ss_pred EEccc
Confidence 88753
No 413
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.01 E-value=1.8e-05 Score=82.81 Aligned_cols=78 Identities=5% Similarity=-0.054 Sum_probs=62.2
Q ss_pred CCCeEEEEECC-CCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEE
Q 004989 607 SNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQ 685 (720)
Q Consensus 607 ~~~V~sv~f~~-dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD 685 (720)
...+.+++|+| ||++++++ +++|.+||+.+. ..+..+.....+.+++|+|+++ +|++++.|++|++||
T Consensus 254 ~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~--------~~~~~~~~~~~~~~~~~s~dg~-~l~~~~~~~~v~v~d 322 (349)
T 1jmx_B 254 TELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQR--------KLIKAANLDHTYYCVAFDKKGD-KLYLGGTFNDLAVFN 322 (349)
T ss_dssp SSCEEEEEECSSCTTEEEEE--ESEEEEEETTTT--------EEEEEEECSSCCCEEEECSSSS-CEEEESBSSEEEEEE
T ss_pred CCcceeeEecCCCCCEEEEE--cCeEEEEECccC--------eEEEEEcCCCCccceEECCCCC-EEEEecCCCeEEEEe
Confidence 56789999999 99999888 899999998765 1233333344578999999754 566678899999999
Q ss_pred CCCCcEEEEE
Q 004989 686 VLHLIYFSAL 695 (720)
Q Consensus 686 ~~tg~~~~~v 695 (720)
+.+++.+.++
T Consensus 323 ~~~~~~~~~~ 332 (349)
T 1jmx_B 323 PDTLEKVKNI 332 (349)
T ss_dssp TTTTEEEEEE
T ss_pred ccccceeeee
Confidence 9999988764
No 414
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.00 E-value=1.5e-05 Score=83.43 Aligned_cols=92 Identities=5% Similarity=-0.087 Sum_probs=71.0
Q ss_pred EEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCC--CEEEEEEecCCCCEEEEEeCCCcEEEEECCCC
Q 004989 612 SLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRS--KLSSICWNSYIKSQIASSNFEGVVQVGQVLHL 689 (720)
Q Consensus 612 sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~--~i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg 689 (720)
.++|++++.++++++.+++|++||..+. ..+..+.... .+..++|+|+++.++++++.+++|.+||+.++
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~--------~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~ 75 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASD--------TVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTC 75 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTT--------EEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTT
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCC--------cEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCC
Confidence 4578999999999999999999998775 1233333323 57899999976545667778999999999999
Q ss_pred cEEEEE-------------EEEeecCCceEEEecC
Q 004989 690 IYFSAL-------------YCIVLNKLLIIFRYGM 711 (720)
Q Consensus 690 ~~~~~v-------------~~v~~~~~~~~~~~~~ 711 (720)
+.+..+ .+++|+|.+..+..++
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~ 110 (349)
T 1jmx_B 76 KNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATV 110 (349)
T ss_dssp EEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEE
T ss_pred cEEEEEEcccccccccccccceEECCCCCEEEEEc
Confidence 887653 4678999887666555
No 415
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=97.99 E-value=8.4e-06 Score=95.09 Aligned_cols=94 Identities=6% Similarity=-0.114 Sum_probs=72.6
Q ss_pred CCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEECC
Q 004989 608 NLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVL 687 (720)
Q Consensus 608 ~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~~ 687 (720)
..|.+++|+|| .+++.+ .|++|++||+.+.. +.....+...+.+++|||++ ++||++ .|+.|.+||+.
T Consensus 82 ~~v~~~~~spd-~~~~~~-~~~~i~~~d~~~~~--------~~~l~~~~~~~~~~~~SpdG-~~la~~-~~~~i~v~~~~ 149 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLF-TQGGLVGFDMLARK--------VTYLFDTNEETASLDFSPVG-DRVAYV-RNHNLYIARGG 149 (706)
T ss_dssp CCCEEEEETTT-TEEEEE-ETTEEEEEETTTTE--------EEEEECCTTCCTTCEECTTS-SEEEEE-ETTEEEEEECB
T ss_pred cCceeEEECCC-CeEEEE-ECCEEEEEECCCCc--------eEEccCCcccccCCcCCCCC-CEEEEE-ECCeEEEEecC
Confidence 56999999999 555544 36999999987651 22223345678999999965 588885 58999999999
Q ss_pred C-----CcEEEE-------E--------------EEEeecCCceEEEecCcc
Q 004989 688 H-----LIYFSA-------L--------------YCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 688 t-----g~~~~~-------v--------------~~v~~~~~~~~~~~~~~~ 713 (720)
+ |+.... + .++.|+|.+..+.++++|
T Consensus 150 ~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d 201 (706)
T 2z3z_A 150 KLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMD 201 (706)
T ss_dssp CTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEE
T ss_pred cccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEEC
Confidence 9 876652 3 688999999999999876
No 416
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=97.98 E-value=5.1e-05 Score=82.34 Aligned_cols=91 Identities=4% Similarity=-0.037 Sum_probs=70.1
Q ss_pred CCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEEC
Q 004989 607 SNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQV 686 (720)
Q Consensus 607 ~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~ 686 (720)
.. |..|+| ||.+|++| .++.|++||+.+..... ..-.+...|.++.|.+. .+|.++.||+|.+||+
T Consensus 88 p~-V~~l~f--d~~~L~v~-~~~~l~v~dv~sl~~~~-------~~~~~~~~v~~i~~~~p---~~av~~~dG~L~v~dl 153 (388)
T 1xip_A 88 PD-VIFVCF--HGDQVLVS-TRNALYSLDLEELSEFR-------TVTSFEKPVFQLKNVNN---TLVILNSVNDLSALDL 153 (388)
T ss_dssp TT-EEEEEE--ETTEEEEE-ESSEEEEEESSSTTCEE-------EEEECSSCEEEEEECSS---EEEEEETTSEEEEEET
T ss_pred CC-eeEEEE--CCCEEEEE-cCCcEEEEEchhhhccC-------ccceeecceeeEEecCC---CEEEEECCCCEEEEEc
Confidence 45 999999 99999998 89999999998764211 11122445788888763 3899999999999999
Q ss_pred CCCcEEEE---EEEEeecCCceEEEecC
Q 004989 687 LHLIYFSA---LYCIVLNKLLIIFRYGM 711 (720)
Q Consensus 687 ~tg~~~~~---v~~v~~~~~~~~~~~~~ 711 (720)
.+++.... |.|++||+.+..++.+.
T Consensus 154 ~~~~~~~~~~~Vs~v~WSpkG~~vg~~d 181 (388)
T 1xip_A 154 RTKSTKQLAQNVTSFDVTNSQLAVLLKD 181 (388)
T ss_dssp TTCCEEEEEESEEEEEECSSEEEEEETT
T ss_pred cCCccccccCCceEEEEcCCceEEEEcC
Confidence 98876543 99999999996665543
No 417
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=97.96 E-value=2e-05 Score=96.77 Aligned_cols=101 Identities=5% Similarity=-0.113 Sum_probs=80.4
Q ss_pred CCCCCC-CeEEEEECCCCCEEEEeeCCCcEE-EeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCc
Q 004989 603 LLNSSN-LVCSLSFDRDGELFAAAGVNKKIK-VFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGV 680 (720)
Q Consensus 603 ~~~~~~-~V~sv~f~~dg~~lat~~~d~~i~-iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~ 680 (720)
+..|.. .|.+++|+ ||+.|++++.+..|. +||..+.. +.....+...+.+++|+|+ +.+||+++.|++
T Consensus 332 ~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~--------~~~l~~~~~~~~~~~~SpD-G~~la~~~~~~~ 401 (1045)
T 1k32_A 332 VPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGK--------AEKFEENLGNVFAMGVDRN-GKFAVVANDRFE 401 (1045)
T ss_dssp CSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCC--------EEECCCCCCSEEEEEECTT-SSEEEEEETTSE
T ss_pred ccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCC--------ceEecCCccceeeeEECCC-CCEEEEECCCCe
Confidence 345566 89999999 999999999988888 88976541 1111133567999999996 569999999999
Q ss_pred EEEEECCCCcEEEE-------EEEEeecCCceEEEecCcc
Q 004989 681 VQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 681 v~lWD~~tg~~~~~-------v~~v~~~~~~~~~~~~~~~ 713 (720)
|++||+.+|+.... +++++|+|.+..+++++.+
T Consensus 402 v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~ 441 (1045)
T 1k32_A 402 IMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPL 441 (1045)
T ss_dssp EEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEE
T ss_pred EEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecC
Confidence 99999999987654 4789999999988877653
No 418
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=97.93 E-value=6e-05 Score=79.97 Aligned_cols=106 Identities=16% Similarity=0.030 Sum_probs=70.0
Q ss_pred CCCCeEEEEECCCCCEE-EEeeCCCcEEEeeCCcccc----c-cccc-ccceEEecCCCCEEEEEEecCCCCEEEEEe-C
Q 004989 606 SSNLVCSLSFDRDGELF-AAAGVNKKIKVFECDAIIN----E-NRDI-HYPVVEMASRSKLSSICWNSYIKSQIASSN-F 677 (720)
Q Consensus 606 ~~~~V~sv~f~~dg~~l-at~~~d~~i~iwd~~~~~~----~-~~~~-~~~~~~~~~~~~i~~l~w~~~~~~~laS~s-~ 677 (720)
+...+.+++|+|||+++ +++..+++|++|++..... . .... ..+............++|+|+++ +|+.++ .
T Consensus 153 ~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~-~l~v~~~~ 231 (361)
T 3scy_A 153 TMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGK-FAYLINEI 231 (361)
T ss_dssp SSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSS-EEEEEETT
T ss_pred CCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCC-EEEEEcCC
Confidence 34567999999999965 5555589999999865321 0 0000 00122333355688999999765 565555 6
Q ss_pred CCcEEEEECCCCcE--EEE----------EEEEeecCCceEE-EecCc
Q 004989 678 EGVVQVGQVLHLIY--FSA----------LYCIVLNKLLIIF-RYGMF 712 (720)
Q Consensus 678 D~~v~lWD~~tg~~--~~~----------v~~v~~~~~~~~~-~~~~~ 712 (720)
+++|.+||+.+|+. +.+ ..+++|+|.+..+ ..+.-
T Consensus 232 ~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~ 279 (361)
T 3scy_A 232 GGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRL 279 (361)
T ss_dssp TCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECS
T ss_pred CCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCC
Confidence 99999999998854 222 3488999999754 54443
No 419
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=97.90 E-value=2.7e-05 Score=91.37 Aligned_cols=97 Identities=14% Similarity=0.119 Sum_probs=71.8
Q ss_pred CCCeEEEEECCCCCEEEEeeCCC-----cEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCc-
Q 004989 607 SNLVCSLSFDRDGELFAAAGVNK-----KIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGV- 680 (720)
Q Consensus 607 ~~~V~sv~f~~dg~~lat~~~d~-----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~- 680 (720)
...+.+++|||||++||.++.++ +|+|||+.++. .+.......++.+++|+|++ ..|+.+++|+.
T Consensus 124 ~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~--------~~~~~~~~~~~~~~~wspDg-~~l~~~~~~~~~ 194 (710)
T 2xdw_A 124 TVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAK--------ELPDVLERVKFSCMAWTHDG-KGMFYNAYPQQD 194 (710)
T ss_dssp CEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTE--------EEEEEEEEECSCCEEECTTS-SEEEEEECCCCS
T ss_pred CEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCC--------CCcccccCcccceEEEEeCC-CEEEEEEECCcc
Confidence 44688999999999999776644 89999998762 11111112347789999965 57888888877
Q ss_pred ---------------EEEEECCCCc----EEEE-------EEEEeecCCceEEEecCc
Q 004989 681 ---------------VQVGQVLHLI----YFSA-------LYCIVLNKLLIIFRYGMF 712 (720)
Q Consensus 681 ---------------v~lWD~~tg~----~~~~-------v~~v~~~~~~~~~~~~~~ 712 (720)
|.+||+.+++ .+.+ +.++.|++.+..+...+.
T Consensus 195 ~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~ 252 (710)
T 2xdw_A 195 GKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIR 252 (710)
T ss_dssp SCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEE
T ss_pred ccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEE
Confidence 9999999987 3322 568999999987776653
No 420
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=97.88 E-value=8.7e-05 Score=78.70 Aligned_cols=91 Identities=11% Similarity=0.063 Sum_probs=61.2
Q ss_pred CCCCeEEEEECCCCCEEEEeeC--CCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEe-CCCcEE
Q 004989 606 SSNLVCSLSFDRDGELFAAAGV--NKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSN-FEGVVQ 682 (720)
Q Consensus 606 ~~~~V~sv~f~~dg~~lat~~~--d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s-~D~~v~ 682 (720)
+...+.+++|+|||++|++++. +++|.||++....... ..+..+.....+.+++|+|+++ +|++++ .+++|.
T Consensus 257 ~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~----~~~~~~~~g~~~~~~~~spdg~-~l~~~~~~~~~v~ 331 (361)
T 3scy_A 257 NAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTL----TKVGYQLTGIHPRNFIITPNGK-YLLVACRDTNVIQ 331 (361)
T ss_dssp CCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCE----EEEEEEECSSCCCEEEECTTSC-EEEEEETTTTEEE
T ss_pred CCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcE----EEeeEecCCCCCceEEECCCCC-EEEEEECCCCCEE
Confidence 3456789999999998755554 5899999986321100 1233333344678999999754 666665 689999
Q ss_pred EE--ECCCCcEEEE--------EEEEeec
Q 004989 683 VG--QVLHLIYFSA--------LYCIVLN 701 (720)
Q Consensus 683 lW--D~~tg~~~~~--------v~~v~~~ 701 (720)
|| |..+|+.... ..||.|.
T Consensus 332 v~~~d~~~g~~~~~~~~~~~~~p~~v~~~ 360 (361)
T 3scy_A 332 IFERDQATGLLTDIKKDIKVDKPVCLKFV 360 (361)
T ss_dssp EEEECTTTCCEEECSCCEECSSEEEEEEE
T ss_pred EEEEECCCCcEeecceeeeCCCCeEEEEc
Confidence 95 6678876543 5666664
No 421
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=97.87 E-value=1.5e-05 Score=93.99 Aligned_cols=92 Identities=11% Similarity=0.021 Sum_probs=69.2
Q ss_pred CeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCC------CEEEEEEecCCCCEEEEEeCC----
Q 004989 609 LVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRS------KLSSICWNSYIKSQIASSNFE---- 678 (720)
Q Consensus 609 ~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~------~i~~l~w~~~~~~~laS~s~D---- 678 (720)
...+++|+|||++|+++ |++|++||+.++. +...+.++. ....++|||++ ++||+++.|
T Consensus 18 ~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~Spdg-~~l~~~~~~~~~~ 86 (740)
T 4a5s_A 18 KLYSLRWISDHEYLYKQ--ENNILVFNAEYGN--------SSVFLENSTFDEFGHSINDYSISPDG-QFILLEYNYVKQW 86 (740)
T ss_dssp CCCCEEECSSSEEEEEE--TTEEEEEETTTCC--------EEEEECTTTTTTCCSCCCEEEECTTS-SEEEEEEEEEECS
T ss_pred cccccEECCCCcEEEEc--CCcEEEEECCCCc--------eEEEEechhhhhhcccccceEECCCC-CEEEEEECCeeeE
Confidence 35689999999999997 9999999998762 122222211 12458999965 588888876
Q ss_pred -----CcEEEEECCCCcEEEE------EEEEeecCCceEEEecC
Q 004989 679 -----GVVQVGQVLHLIYFSA------LYCIVLNKLLIIFRYGM 711 (720)
Q Consensus 679 -----~~v~lWD~~tg~~~~~------v~~v~~~~~~~~~~~~~ 711 (720)
+.+.|||+.+|++..- +..++|||.+..+++.+
T Consensus 87 r~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~~~SPdG~~la~~~ 130 (740)
T 4a5s_A 87 RHSYTASYDIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVW 130 (740)
T ss_dssp SSCEEEEEEEEETTTTEECCSSCCCTTEEEEEECSSTTCEEEEE
T ss_pred EEccceEEEEEECCCCcEEEcccCCCcceeeEECCCCCEEEEEE
Confidence 4556999999986542 78999999999888875
No 422
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=97.86 E-value=5.6e-06 Score=83.84 Aligned_cols=91 Identities=8% Similarity=0.010 Sum_probs=63.3
Q ss_pred hhhhhhcccCCCCC--ceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 004989 65 HSDGVELTHGDHLR--NQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 65 ~~e~~~L~~l~Hpn--IV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
.+|..++..+.+.+ +.+++. +...+ ...+++||| .|.+|. ... .. ...++.+++..|..||+..
T Consensus 61 ~~E~~~l~~l~~~~~~vP~~~~-~~~~~---~~~~~v~e~i~G~~l~--~~~----~~---~~~~~~~l~~~l~~lh~~~ 127 (264)
T 1nd4_A 61 QDEAARLSWLATTGVPCAAVLD-VVTEA---GRDWLLLGEVPGQDLL--SSH----LA---PAEKVSIMADAMRRLHTLD 127 (264)
T ss_dssp HHHHHHHHHHHTTTCCBCCEEE-EEECS---SCEEEEEECCSSEETT--TSC----CC---HHHHHHHHHHHHHHHTTSC
T ss_pred hHHHHHHHHHHhCCCCCCeEEE-eccCC---CCCEEEEEecCCcccC--cCc----CC---HhHHHHHHHHHHHHHhCCC
Confidence 35566666665444 445666 33333 247999999 888874 211 22 2356778888888888743
Q ss_pred ----------------------------------------------------------ceeccCCCCcEEEccCCceEEe
Q 004989 142 ----------------------------------------------------------IVVHNVRPSCFVMSSFNHVSFI 163 (720)
Q Consensus 142 ----------------------------------------------------------IvHrDLKP~NILl~~~~~vkli 163 (720)
++|+|++|.||+++.++.+.|+
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~li 207 (264)
T 1nd4_A 128 PATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFI 207 (264)
T ss_dssp GGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEEC
T ss_pred CCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEE
Confidence 9999999999999876556799
Q ss_pred ecCcc
Q 004989 164 ESASC 168 (720)
Q Consensus 164 Dfg~a 168 (720)
||+.+
T Consensus 208 D~~~a 212 (264)
T 1nd4_A 208 DCGRL 212 (264)
T ss_dssp CCTTC
T ss_pred cchhc
Confidence 99987
No 423
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=97.85 E-value=3.4e-05 Score=89.19 Aligned_cols=105 Identities=4% Similarity=-0.206 Sum_probs=72.8
Q ss_pred CCCCeEEEEECCCCCEEEEeeCC----------CcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEE
Q 004989 606 SSNLVCSLSFDRDGELFAAAGVN----------KKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIAS 674 (720)
Q Consensus 606 ~~~~V~sv~f~~dg~~lat~~~d----------~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~w~~~~~~~laS 674 (720)
|...+.+++|+|||+.||+++.| .+|.+||..+.... +...+.... .+...+..++|||++ .+||.
T Consensus 128 ~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~~~~~l~~~~~~~~~~~~~SpDG-~~la~ 204 (662)
T 3azo_A 128 GGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAA--DRSAVRELSDDAHRFVTGPRLSPDG-RQAVW 204 (662)
T ss_dssp TCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTT--CGGGSEESSCSCSSEECCCEECTTS-SEEEE
T ss_pred CCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccc--cCCceeEEEecCCCcccCceECCCC-CEEEE
Confidence 56788999999999999999887 68999998761000 000111111 234568889999965 58887
Q ss_pred EeCCC--------cEEEEECC-CC---cEEEE-------EEEEeecCCceEEEecCcc
Q 004989 675 SNFEG--------VVQVGQVL-HL---IYFSA-------LYCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 675 ~s~D~--------~v~lWD~~-tg---~~~~~-------v~~v~~~~~~~~~~~~~~~ 713 (720)
++.|+ .|.+||+. +| +.... +++++|+|.+.++..++-+
T Consensus 205 ~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~ 262 (662)
T 3azo_A 205 LAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRT 262 (662)
T ss_dssp EEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTT
T ss_pred EECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCC
Confidence 77553 79999999 67 32221 6789999998866665554
No 424
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=97.82 E-value=0.00017 Score=75.88 Aligned_cols=81 Identities=9% Similarity=0.014 Sum_probs=58.2
Q ss_pred CCeEEEEECCCCCEE-EEeeCCCcEEEeeCCcccccccccccceEEecC-CCCEEEEEEecCCCCEEEEEeC-CCcEEEE
Q 004989 608 NLVCSLSFDRDGELF-AAAGVNKKIKVFECDAIINENRDIHYPVVEMAS-RSKLSSICWNSYIKSQIASSNF-EGVVQVG 684 (720)
Q Consensus 608 ~~V~sv~f~~dg~~l-at~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~i~~l~w~~~~~~~laS~s~-D~~v~lW 684 (720)
..+.+++|+|||++| +++..+++|.|||+.... . ...+..+.. ...+.+++|+|++ .+|++++. +++|.||
T Consensus 240 ~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g-~----~~~~~~~~~~~~~~~~~~~spdg-~~l~v~~~~~~~v~v~ 313 (347)
T 3hfq_A 240 NGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADG-H----LTLIQQISTEGDFPRDFDLDPTE-AFVVVVNQNTDNATLY 313 (347)
T ss_dssp CEEEEEEECTTSCEEEEEEETTTEEEEEEECGGG-C----EEEEEEEECSSSCCCEEEECTTS-SEEEEEETTTTEEEEE
T ss_pred CcceeEEECCCCCEEEEEeCCCCEEEEEEECCCC-c----EEEeEEEecCCCCcCeEEECCCC-CEEEEEEcCCCcEEEE
Confidence 568999999999976 677779999999986320 0 012333333 4458899999965 46776665 5999999
Q ss_pred --ECCCCcEEEE
Q 004989 685 --QVLHLIYFSA 694 (720)
Q Consensus 685 --D~~tg~~~~~ 694 (720)
|..+|+....
T Consensus 314 ~~d~~tg~l~~~ 325 (347)
T 3hfq_A 314 ARDLTSGKLSLL 325 (347)
T ss_dssp EECTTTCCEEEE
T ss_pred EEeCCCCeEEec
Confidence 7778876643
No 425
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=97.72 E-value=0.00015 Score=76.09 Aligned_cols=94 Identities=13% Similarity=0.083 Sum_probs=64.8
Q ss_pred CCeEEEEECCCCCEEEEeeCC---Cc--EEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCC----
Q 004989 608 NLVCSLSFDRDGELFAAAGVN---KK--IKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFE---- 678 (720)
Q Consensus 608 ~~V~sv~f~~dg~~lat~~~d---~~--i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D---- 678 (720)
..+.+++|+|||++||.++.+ +. |.+||+.++. +........ +.+++|+|++ ..||.++.+
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~--------~~~l~~~~~-~~~~~wspdg-~~l~~~~~~~~~~ 128 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLS--------SKKILEAKN-IRSLEWNEDS-RKLLIVGFKRRED 128 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTE--------EEEEEEESE-EEEEEECTTS-SEEEEEEECCCC-
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCc--------eEEEEcCCC-ccceeECCCC-CEEEEEEccCCCc
Confidence 347889999999999988764 33 7777876541 121122233 9999999965 467666532
Q ss_pred -----------------------CcEEEEECCCCcEEEEE-----EEEeecCCceEEEecCc
Q 004989 679 -----------------------GVVQVGQVLHLIYFSAL-----YCIVLNKLLIIFRYGMF 712 (720)
Q Consensus 679 -----------------------~~v~lWD~~tg~~~~~v-----~~v~~~~~~~~~~~~~~ 712 (720)
..|.+||+.+|+.+..+ .+++|+|.+ ++..++.
T Consensus 129 ~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~spdg-~~~~~~~ 189 (347)
T 2gop_A 129 EDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEKPRFSSGIWHRDK-IVVNVPH 189 (347)
T ss_dssp --------CCCC---------CEEEEEEEETTTTEEEEEEEEETTCEEEEETTE-EEEEEEC
T ss_pred CCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecCCCcccccCCCCe-EEEEEec
Confidence 57999999999874443 468899998 5555544
No 426
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=97.62 E-value=0.00048 Score=73.46 Aligned_cols=95 Identities=6% Similarity=-0.137 Sum_probs=66.5
Q ss_pred CCCCeEEEEECCCCCEEEEeeC-CCcEEEeeCC-cccccccccccceEEec---CCCCEEEEEEecCCCCEEEEEe-CCC
Q 004989 606 SSNLVCSLSFDRDGELFAAAGV-NKKIKVFECD-AIINENRDIHYPVVEMA---SRSKLSSICWNSYIKSQIASSN-FEG 679 (720)
Q Consensus 606 ~~~~V~sv~f~~dg~~lat~~~-d~~i~iwd~~-~~~~~~~~~~~~~~~~~---~~~~i~~l~w~~~~~~~laS~s-~D~ 679 (720)
+...+.+++|+|||+++++++. +.+|++||+. ++.. .++..+. +...+..++|+|+++ +|+.++ .++
T Consensus 143 ~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~------~~~~~~~~~~~g~~p~~~~~spdg~-~l~v~~~~~~ 215 (365)
T 1jof_A 143 ENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEV------ELVGSVDAPDPGDHPRWVAMHPTGN-YLYALMEAGN 215 (365)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCE------EEEEEEECSSTTCCEEEEEECTTSS-EEEEEETTTT
T ss_pred CCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCE------EEeeeEecCCCCCCCCEeEECCCCC-EEEEEECCCC
Confidence 4567999999999998777654 6899999987 4310 1222222 245689999999754 666665 478
Q ss_pred cEEEEECC--CCcEEE-----------------------EEEEEe-ecCCceEE
Q 004989 680 VVQVGQVL--HLIYFS-----------------------ALYCIV-LNKLLIIF 707 (720)
Q Consensus 680 ~v~lWD~~--tg~~~~-----------------------~v~~v~-~~~~~~~~ 707 (720)
+|.+|++. +|+... .+.+++ |+|.+..+
T Consensus 216 ~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l 269 (365)
T 1jof_A 216 RICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYM 269 (365)
T ss_dssp EEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEE
T ss_pred eEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEE
Confidence 99999764 676421 256788 99998643
No 427
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=97.59 E-value=0.0003 Score=75.34 Aligned_cols=81 Identities=11% Similarity=0.086 Sum_probs=60.7
Q ss_pred EEECCCCCEEEEeeC-----------CCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcE
Q 004989 613 LSFDRDGELFAAAGV-----------NKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 613 v~f~~dg~~lat~~~-----------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~v 681 (720)
++|+|||..+..+.. +.+|.+||..+. ..+..+.... ..+++|+|+++ +|++++. ++|
T Consensus 259 ~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~--------~~v~~i~~~~-p~~ia~spdg~-~l~v~n~-~~v 327 (361)
T 2oiz_A 259 VGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTK--------QRVARIPGRD-ALSMTIDQQRN-LMLTLDG-GNV 327 (361)
T ss_dssp EEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTT--------EEEEEEECTT-CCEEEEETTTT-EEEEECS-SCE
T ss_pred EEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCC--------cEEEEEecCC-eeEEEECCCCC-EEEEeCC-CeE
Confidence 689999876444322 458999998776 2444444444 89999999765 8888886 999
Q ss_pred EEEECCCC--cEEEEE-------EEEeecCCc
Q 004989 682 QVGQVLHL--IYFSAL-------YCIVLNKLL 704 (720)
Q Consensus 682 ~lWD~~tg--~~~~~v-------~~v~~~~~~ 704 (720)
.|||+.|+ +.+.++ +.++++|.+
T Consensus 328 ~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~G 359 (361)
T 2oiz_A 328 NVYDISQPEPKLLRTIEGAAEASLQVQFHPVG 359 (361)
T ss_dssp EEEECSSSSCEEEEEETTSCSSEEEEEECCCS
T ss_pred EEEECCCCcceeeEEeccCCCCcEEEEecCCC
Confidence 99999999 988874 566777654
No 428
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=97.55 E-value=0.00099 Score=67.87 Aligned_cols=93 Identities=12% Similarity=0.078 Sum_probs=71.6
Q ss_pred CCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecC---CCCEEEEEEecCCCCEEEEEeCCC-cEE
Q 004989 607 SNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS---RSKLSSICWNSYIKSQIASSNFEG-VVQ 682 (720)
Q Consensus 607 ~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~---~~~i~~l~w~~~~~~~laS~s~D~-~v~ 682 (720)
...+.+|+|+|+|.++++.+.+++|++||.... .+..+.. -.....|+++|++ +++++...++ .|.
T Consensus 163 ~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g~---------~~~~~~~~g~~~~p~~i~~d~~G-~l~v~~~~~~~~i~ 232 (286)
T 1q7f_A 163 LEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQ---------YLRQIGGEGITNYPIGVGINSNG-EILIADNHNNFNLT 232 (286)
T ss_dssp CSSEEEEEECSSSEEEEEEGGGTEEEEEETTCC---------EEEEESCTTTSCSEEEEEECTTC-CEEEEECSSSCEEE
T ss_pred cCCcEEEEECCCCCEEEEECCCCEEEEEcCCCC---------EEEEEccCCccCCCcEEEECCCC-CEEEEeCCCCEEEE
Confidence 457899999999999999889999999996432 1222222 2468899999964 6888887776 999
Q ss_pred EEECCCCcEEEE---------EEEEeecCCceEEEec
Q 004989 683 VGQVLHLIYFSA---------LYCIVLNKLLIIFRYG 710 (720)
Q Consensus 683 lWD~~tg~~~~~---------v~~v~~~~~~~~~~~~ 710 (720)
+||. +|+.+.+ .+++++++.+.+++++
T Consensus 233 ~~~~-~g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs~ 268 (286)
T 1q7f_A 233 IFTQ-DGQLISALESKVKHAQCFDVALMDDGSVVLAS 268 (286)
T ss_dssp EECT-TSCEEEEEEESSCCSCEEEEEEETTTEEEEEE
T ss_pred EECC-CCCEEEEEcccCCCCcceeEEECCCCcEEEEC
Confidence 9995 5666655 4588999999888875
No 429
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=97.53 E-value=0.0011 Score=69.78 Aligned_cols=97 Identities=14% Similarity=0.146 Sum_probs=71.9
Q ss_pred CCCCCeEEEEECC-CCCEEEEee-CCCcEEEeeCCcccccccccccceEEecC-----------CCCEEEEEEecCCCCE
Q 004989 605 NSSNLVCSLSFDR-DGELFAAAG-VNKKIKVFECDAIINENRDIHYPVVEMAS-----------RSKLSSICWNSYIKSQ 671 (720)
Q Consensus 605 ~~~~~V~sv~f~~-dg~~lat~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-----------~~~i~~l~w~~~~~~~ 671 (720)
++-....+|+|+| +|.++++.+ .+++|++||.... .+..+.. -.....|+++|+.+.+
T Consensus 140 ~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~g~---------~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l 210 (329)
T 3fvz_A 140 NHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPSGK---------FVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQL 210 (329)
T ss_dssp TCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTTSC---------EEEEECEECCSSSCCTTEESCEEEEEEETTTTEE
T ss_pred cccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCCCC---------EEEEeccCCCCCCCCCcccCCCcEEEEECCCCEE
Confidence 4456789999999 899999987 7999999995422 1111111 1237899999976778
Q ss_pred EEEEeCCCcEEEEECCCCcEEEE---------EEEEeecCCceEEEec
Q 004989 672 IASSNFEGVVQVGQVLHLIYFSA---------LYCIVLNKLLIIFRYG 710 (720)
Q Consensus 672 laS~s~D~~v~lWD~~tg~~~~~---------v~~v~~~~~~~~~~~~ 710 (720)
+++...++.|++||..+|+.+.+ +++++|+|...+..+|
T Consensus 211 ~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g 258 (329)
T 3fvz_A 211 CVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNG 258 (329)
T ss_dssp EEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEEC
T ss_pred EEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCC
Confidence 88888899999999999998876 5788899833333333
No 430
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=97.52 E-value=0.0003 Score=74.91 Aligned_cols=73 Identities=8% Similarity=-0.024 Sum_probs=53.6
Q ss_pred EEEECCCCCEEEEeeC-CCc--EEEeeCCcccccccccccceEEecC-CCCEEEEEEecCCCCEEEEEeCCCcEEEEECC
Q 004989 612 SLSFDRDGELFAAAGV-NKK--IKVFECDAIINENRDIHYPVVEMAS-RSKLSSICWNSYIKSQIASSNFEGVVQVGQVL 687 (720)
Q Consensus 612 sv~f~~dg~~lat~~~-d~~--i~iwd~~~~~~~~~~~~~~~~~~~~-~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~~ 687 (720)
..+|+|||++||.++. +++ |.+||..++. +.....+ ...+..++|+|++ ..||.++.|+.|.+||+.
T Consensus 40 ~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~--------~~~lt~~~~~~~~~~~~spdg-~~l~~~~~~~~l~~~d~~ 110 (388)
T 3pe7_A 40 QKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQV--------ATQLTEGRGDNTFGGFLSPDD-DALFYVKDGRNLMRVDLA 110 (388)
T ss_dssp SCCBCTTSCEEEEEECTTSSCEEEEEETTTCE--------EEECCCSSCBCSSSCEECTTS-SEEEEEETTTEEEEEETT
T ss_pred CccCCCCCCEEEEEEcCCCCceEEEEeCCCCc--------eEEeeeCCCCCccceEEcCCC-CEEEEEeCCCeEEEEECC
Confidence 3889999999999988 664 7888877652 1111112 2234467899965 589999999999999999
Q ss_pred CCcEEE
Q 004989 688 HLIYFS 693 (720)
Q Consensus 688 tg~~~~ 693 (720)
+|+...
T Consensus 111 ~g~~~~ 116 (388)
T 3pe7_A 111 TLEENV 116 (388)
T ss_dssp TCCEEE
T ss_pred CCccee
Confidence 998654
No 431
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=97.51 E-value=0.00085 Score=69.95 Aligned_cols=97 Identities=11% Similarity=0.008 Sum_probs=73.9
Q ss_pred CCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCC----Cc
Q 004989 606 SSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFE----GV 680 (720)
Q Consensus 606 ~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~w~~~~~~~laS~s~D----~~ 680 (720)
+...+.+++|+|||++++++..++.|.+||..+.. ..... .....+.+++|+|++ .+++++..+ +.
T Consensus 43 ~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~--------~~~~~~~~~~~~~~i~~~~dg-~l~v~~~~~~~~~~~ 113 (333)
T 2dg1_A 43 KGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKE--------IKRPFVSHKANPAAIKIHKDG-RLFVCYLGDFKSTGG 113 (333)
T ss_dssp SCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCC--------EEEEEECSSSSEEEEEECTTS-CEEEEECTTSSSCCE
T ss_pred cCccccCcEECCCCCEEEEECCCCEEEEEeCCCCc--------EEEEeeCCCCCcceEEECCCC-cEEEEeCCCCCCCce
Confidence 35678999999999999999999999999987641 11111 234679999999965 577776666 68
Q ss_pred EEEEECCCCcEEE---------EEEEEeecCCceEEEecC
Q 004989 681 VQVGQVLHLIYFS---------ALYCIVLNKLLIIFRYGM 711 (720)
Q Consensus 681 v~lWD~~tg~~~~---------~v~~v~~~~~~~~~~~~~ 711 (720)
|.+||..+++... .++++++++.+.++..++
T Consensus 114 i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~ 153 (333)
T 2dg1_A 114 IFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDF 153 (333)
T ss_dssp EEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEEC
T ss_pred EEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEec
Confidence 9999998886531 178899999888887665
No 432
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=97.47 E-value=0.00018 Score=84.80 Aligned_cols=95 Identities=14% Similarity=0.050 Sum_probs=68.5
Q ss_pred CCeEEEEECCCCCEEEEeeCC-----CcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCc--
Q 004989 608 NLVCSLSFDRDGELFAAAGVN-----KKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGV-- 680 (720)
Q Consensus 608 ~~V~sv~f~~dg~~lat~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~-- 680 (720)
..+.+++|||||++||.++.+ .+|+|||+.++. .+.......++..++|+|+ ..|+.+++|+.
T Consensus 163 ~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~--------~~~~~~~~~~~~~~~wspD--~~l~~~~~~~~~~ 232 (741)
T 1yr2_A 163 TALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGK--------PLADELKWVKFSGLAWLGN--DALLYSRFAEPKE 232 (741)
T ss_dssp EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCC--------EEEEEEEEEESCCCEESTT--SEEEEEECCCC--
T ss_pred EEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCC--------CCCccCCCceeccEEEECC--CEEEEEEecCccc
Confidence 468899999999999887654 579999998762 1111111223468899997 57777777765
Q ss_pred ------------EEEEECCCCc----EEEE-------EEEEeecCCceEEEecCc
Q 004989 681 ------------VQVGQVLHLI----YFSA-------LYCIVLNKLLIIFRYGMF 712 (720)
Q Consensus 681 ------------v~lWD~~tg~----~~~~-------v~~v~~~~~~~~~~~~~~ 712 (720)
|.+|++.|++ .+.+ +.++.|++.+..++..+.
T Consensus 233 ~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~ 287 (741)
T 1yr2_A 233 GQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSS 287 (741)
T ss_dssp ------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEE
T ss_pred ccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEE
Confidence 9999998886 3332 678999999977766554
No 433
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=97.42 E-value=0.00018 Score=76.75 Aligned_cols=94 Identities=11% Similarity=0.049 Sum_probs=64.7
Q ss_pred CCeEEEEECCCCCEEEEeeCCCcEEEeeCC-cccccccccccceEEecCCCCEEEEEEecCCCC-EEEEEe---------
Q 004989 608 NLVCSLSFDRDGELFAAAGVNKKIKVFECD-AIINENRDIHYPVVEMASRSKLSSICWNSYIKS-QIASSN--------- 676 (720)
Q Consensus 608 ~~V~sv~f~~dg~~lat~~~d~~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~-~laS~s--------- 676 (720)
..+..++|+|||++|++++.+ +|.+||+. ++.. ..+......+...+++|+|+++. +|++++
T Consensus 40 ~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~------~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~ 112 (365)
T 1jof_A 40 EPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEI------VHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYAN 112 (365)
T ss_dssp CCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEE------EEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEE
T ss_pred CCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCE------EEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccc
Confidence 457899999999999999888 99999975 3310 01111111123556899997643 466765
Q ss_pred ----CCCcEEEEECC-CCcEEEE-----------EEEEeecCCceEEE
Q 004989 677 ----FEGVVQVGQVL-HLIYFSA-----------LYCIVLNKLLIIFR 708 (720)
Q Consensus 677 ----~D~~v~lWD~~-tg~~~~~-----------v~~v~~~~~~~~~~ 708 (720)
.||+|++|++. .|+.... +.+++|+|.+..+.
T Consensus 113 ~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~ 160 (365)
T 1jof_A 113 PFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLY 160 (365)
T ss_dssp EESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEE
T ss_pred eeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEE
Confidence 69999999997 5654322 56899999986443
No 434
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=97.38 E-value=0.0021 Score=65.43 Aligned_cols=103 Identities=8% Similarity=0.018 Sum_probs=74.7
Q ss_pred CCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-------CCCCEEEEEEecCCCCEEE
Q 004989 601 GDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-------SRSKLSSICWNSYIKSQIA 673 (720)
Q Consensus 601 ~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-------~~~~i~~l~w~~~~~~~la 673 (720)
|.-.++-..+.+|+|+++|.++++.+.+++|.+||.... .+..+. +...+.++++++..+.+++
T Consensus 23 g~~~g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g~---------~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v 93 (286)
T 1q7f_A 23 GVMEGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGR---------FKFQFGECGKRDSQLLYPNRVAVVRNSGDIIV 93 (286)
T ss_dssp SSSTTCBSCEEEEEECTTCCEEEEEGGGTEEEEECTTSC---------EEEEECCBSSSTTCBSSEEEEEEETTTTEEEE
T ss_pred CCCCCccCCCceEEECCCCCEEEEECCCCEEEEECCCCc---------EEEEecccCCCcccccCceEEEEEcCCCeEEE
Confidence 334455677999999999999999999999999997532 111111 1235889999644555555
Q ss_pred EEeC-CCcEEEEECCCCcEEEE--------EEEEeecCCceEEEecCcc
Q 004989 674 SSNF-EGVVQVGQVLHLIYFSA--------LYCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 674 S~s~-D~~v~lWD~~tg~~~~~--------v~~v~~~~~~~~~~~~~~~ 713 (720)
+... ++.|.+|| .+|+.+.+ .+++++++.+.+++.++.+
T Consensus 94 ~~~~~~~~i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~ 141 (286)
T 1q7f_A 94 TERSPTHQIQIYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKV 141 (286)
T ss_dssp EECGGGCEEEEEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTT
T ss_pred EcCCCCCEEEEEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCC
Confidence 5533 89999999 67777654 6789999998888876654
No 435
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=97.35 E-value=0.00039 Score=80.24 Aligned_cols=100 Identities=8% Similarity=-0.015 Sum_probs=67.8
Q ss_pred CCCCCeEEEEECCCCCEEEEeeCCC--------cEEEeeCC-cccccccccccceEEecC-CCCEEEEEEecCCCCEEEE
Q 004989 605 NSSNLVCSLSFDRDGELFAAAGVNK--------KIKVFECD-AIINENRDIHYPVVEMAS-RSKLSSICWNSYIKSQIAS 674 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~~lat~~~d~--------~i~iwd~~-~~~~~~~~~~~~~~~~~~-~~~i~~l~w~~~~~~~laS 674 (720)
.+...+.+++|||||++||.++.++ .|.+||+. ++. ...+.....+ ...+..++|+|+++ ++++
T Consensus 185 ~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~-----~~~~~~l~~~~~~~~~~~~~spdg~-l~~~ 258 (662)
T 3azo_A 185 DAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGR-----FADTRTLLGGPEEAIAQAEWAPDGS-LIVA 258 (662)
T ss_dssp SCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSC-----EEEEEEEEEETTBCEEEEEECTTSC-EEEE
T ss_pred cCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCc-----ccccEEeCCCCCceEcceEECCCCe-EEEE
Confidence 4457888999999999999888664 79999987 330 0011122222 46799999999876 8899
Q ss_pred EeCCC--cEEEEECCCCcEEEE---------------EEEEeecCCceEEEec
Q 004989 675 SNFEG--VVQVGQVLHLIYFSA---------------LYCIVLNKLLIIFRYG 710 (720)
Q Consensus 675 ~s~D~--~v~lWD~~tg~~~~~---------------v~~v~~~~~~~~~~~~ 710 (720)
++.|+ .|.+||+.+|+.... +.+++|++.+.++.++
T Consensus 259 ~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~ 311 (662)
T 3azo_A 259 TDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVH 311 (662)
T ss_dssp ECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEE
T ss_pred ECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEE
Confidence 99999 555567667765432 2356676666555544
No 436
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=97.31 E-value=0.00015 Score=75.83 Aligned_cols=105 Identities=8% Similarity=0.012 Sum_probs=71.7
Q ss_pred hhhchhhhhhcccCC-CCCc--eecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHH
Q 004989 61 ELRKHSDGVELTHGD-HLRN--QGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYA 136 (720)
Q Consensus 61 ~~r~~~e~~~L~~l~-HpnI--V~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~y 136 (720)
..+..+|..+|..+. +..| .+++. ...........|+|||+ .|.+|.+... ..++..+...++.|++..|..
T Consensus 54 ~~~~~~E~~~l~~l~~~~~v~vP~~~~-~~~~~~~~~~~~~vm~~i~G~~l~~~~~---~~l~~~~~~~~~~~l~~~la~ 129 (304)
T 3sg8_A 54 STNLFNEVNILKRIHNKLPLPIPEVVF-TGMPSETYQMSFAGFTKIKGVPLTPLLL---NNLPKQSQNQAAKDLARFLSE 129 (304)
T ss_dssp HHHHHHHHHHHHHHTTSSSSCCCCEEE-ECCCCSSCSCSCEEEECCCCEECCHHHH---HTSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCceEe-ecCCCCCCCcceEEEcccCCeECCcccc---ccCCHHHHHHHHHHHHHHHHH
Confidence 334556676776652 3222 23333 22222222245889999 8888865332 237888888999999999999
Q ss_pred HHH----------------------------------------------------------CCceeccCCCCcEEEcc--
Q 004989 137 AHS----------------------------------------------------------QGIVVHNVRPSCFVMSS-- 156 (720)
Q Consensus 137 LHs----------------------------------------------------------~gIvHrDLKP~NILl~~-- 156 (720)
||+ ..++|+|++|.||+++.
T Consensus 130 LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~ 209 (304)
T 3sg8_A 130 LHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEK 209 (304)
T ss_dssp HHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTT
T ss_pred HHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCC
Confidence 996 24699999999999997
Q ss_pred CCceEEeecCccc
Q 004989 157 FNHVSFIESASCS 169 (720)
Q Consensus 157 ~~~vkliDfg~a~ 169 (720)
.+.+.++||+.+.
T Consensus 210 ~~~~~~iD~~~~~ 222 (304)
T 3sg8_A 210 NTICGIIDFGDAA 222 (304)
T ss_dssp TEEEEECCCTTCE
T ss_pred CCEEEEEeCCCCc
Confidence 4567899999874
No 437
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=97.30 E-value=0.0025 Score=66.82 Aligned_cols=98 Identities=15% Similarity=0.011 Sum_probs=74.1
Q ss_pred CCCeEEEEECCC-CCEEEEeeCCCcEEEeeCCcccccccccccceEEe---cCCCCEEEEEEecCCCCEEEEEe------
Q 004989 607 SNLVCSLSFDRD-GELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM---ASRSKLSSICWNSYIKSQIASSN------ 676 (720)
Q Consensus 607 ~~~V~sv~f~~d-g~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~---~~~~~i~~l~w~~~~~~~laS~s------ 676 (720)
-....+|+|+|+ |.++++...+++|++||..++. .+..+ .....+..++|+| +..+++.+
T Consensus 195 ~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~--------~~~~~~~~~~~~~~~~~~~~p--g~~~~~~g~~~v~~ 264 (329)
T 3fvz_A 195 FSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKE--------FVREIKHASFGRNVFAISYIP--GFLFAVNGKPYFGD 264 (329)
T ss_dssp ESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCC--------EEEEECCTTTTTCEEEEEEET--TEEEEEECCCCTTC
T ss_pred cCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCc--------EEEEEeccccCCCcceeeecC--CEEEEeCCCEEecc
Confidence 356899999999 8889999999999999987541 22222 1245688999999 32333332
Q ss_pred -CCCcEEEEECCCCcEEEE----------EEEEeecCCceEEEecCccc
Q 004989 677 -FEGVVQVGQVLHLIYFSA----------LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 677 -~D~~v~lWD~~tg~~~~~----------v~~v~~~~~~~~~~~~~~~~ 714 (720)
.+.+|++||..+|+.+.+ .++|++++.+.++++++.+.
T Consensus 265 ~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~ 313 (329)
T 3fvz_A 265 QEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTN 313 (329)
T ss_dssp SCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSC
T ss_pred CCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCC
Confidence 345999999999998877 57899999999998887654
No 438
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=97.28 E-value=0.00078 Score=71.61 Aligned_cols=98 Identities=6% Similarity=-0.057 Sum_probs=67.7
Q ss_pred CCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEE--ecCCCCEEEE---------
Q 004989 606 SSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICW--NSYIKSQIAS--------- 674 (720)
Q Consensus 606 ~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w--~~~~~~~laS--------- 674 (720)
+...+.+++|+|||+.||.++.++.|.+||+.++... .+... +...+....| +|++ .+|+.
T Consensus 79 ~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~------~~~~~-~~~~~~~~~~~~~~dg-~~l~~~~~~~~~~~ 150 (388)
T 3pe7_A 79 RGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEEN------VVYQV-PAEWVGYGTWVANSDC-TKLVGIEIRREDWV 150 (388)
T ss_dssp SCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEE------EEEEC-CTTEEEEEEEEECTTS-SEEEEEEEEGGGCC
T ss_pred CCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcce------eeeec-hhhcccccceeECCCC-CeeccccccCcccc
Confidence 3445557789999999999999999999998876211 11111 1233444444 7754 46663
Q ss_pred -------------EeCCCcEEEEECCCCcEEEE------EEEEeecC-CceEEEecC
Q 004989 675 -------------SNFEGVVQVGQVLHLIYFSA------LYCIVLNK-LLIIFRYGM 711 (720)
Q Consensus 675 -------------~s~D~~v~lWD~~tg~~~~~------v~~v~~~~-~~~~~~~~~ 711 (720)
.+.+..|.+||+.+|+...- +..++|+| .+..+++.+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~sp~dg~~l~~~~ 207 (388)
T 3pe7_A 151 PLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQENQWLGHPIYRPYDDSTVAFCH 207 (388)
T ss_dssp CCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEE
T ss_pred cccccchhhhhhccCCcceEEEEECCCCceEEeecCCccccccEECCCCCCEEEEEE
Confidence 33567899999999975543 67899999 887776644
No 439
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=97.25 E-value=0.0013 Score=67.48 Aligned_cols=93 Identities=11% Similarity=-0.073 Sum_probs=71.9
Q ss_pred CCCeEEEEECCCCC-EEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEE
Q 004989 607 SNLVCSLSFDRDGE-LFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQ 685 (720)
Q Consensus 607 ~~~V~sv~f~~dg~-~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD 685 (720)
.....+++|+|+|+ +++++..++.|.+||..+. .. ........+.+++|+|++ .++++...++.|.+||
T Consensus 27 ~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~~--------~~~~~~~~~~~l~~~~dg-~l~v~~~~~~~i~~~d 96 (296)
T 3e5z_A 27 FTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-LS--------PEMHPSHHQNGHCLNKQG-HLIACSHGLRRLERQR 96 (296)
T ss_dssp CSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-EE--------EEESSCSSEEEEEECTTC-CEEEEETTTTEEEEEC
T ss_pred CccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-eE--------EEECCCCCcceeeECCCC-cEEEEecCCCeEEEEc
Confidence 46688999999998 8889999999999997654 11 111234568999999964 5777777779999999
Q ss_pred CCCCcEEEE-----------EEEEeecCCceEEEe
Q 004989 686 VLHLIYFSA-----------LYCIVLNKLLIIFRY 709 (720)
Q Consensus 686 ~~tg~~~~~-----------v~~v~~~~~~~~~~~ 709 (720)
..+|+...- ++.+++++.+.++.+
T Consensus 97 ~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vt 131 (296)
T 3e5z_A 97 EPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFS 131 (296)
T ss_dssp STTCCEEEEECEETTEECCCCCCEEECTTSCEEEE
T ss_pred CCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEE
Confidence 998875432 346899999998886
No 440
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.25 E-value=0.00047 Score=73.25 Aligned_cols=91 Identities=12% Similarity=0.007 Sum_probs=59.7
Q ss_pred EeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCC---CcEEEeeCCcccccccccccceEEecCCCCE-EEEEEecCCC
Q 004989 594 VKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVN---KKIKVFECDAIINENRDIHYPVVEMASRSKL-SSICWNSYIK 669 (720)
Q Consensus 594 ~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d---~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i-~~l~w~~~~~ 669 (720)
.+..|..+....|...+.+++|+|||++||.++.. ..|.+||..++. +.....+.... .++.|+|++
T Consensus 22 ~~~~l~~~~~~~~~~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~--------~~~l~~~~~~~~~~~~~spdg- 92 (396)
T 3c5m_A 22 KVTRLTPTDIICHRNYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQ--------AVQLTEGKGDNTFGGFISTDE- 92 (396)
T ss_dssp EEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTE--------EEECCCSSCBCTTTCEECTTS-
T ss_pred ceEEEecCCCCccceeeecCcCCCCCCEEEEEEecCCCceEEEEECCCCc--------EEEeecCCCCccccceECCCC-
Confidence 34444422222344557889999999998877543 478888976652 11111122232 347899965
Q ss_pred CEEEEEeCCCcEEEEECCCCcEEE
Q 004989 670 SQIASSNFEGVVQVGQVLHLIYFS 693 (720)
Q Consensus 670 ~~laS~s~D~~v~lWD~~tg~~~~ 693 (720)
.+||.++.++.|.+||+.+|+...
T Consensus 93 ~~l~~~~~~~~l~~~d~~~~~~~~ 116 (396)
T 3c5m_A 93 RAFFYVKNELNLMKVDLETLEEQV 116 (396)
T ss_dssp SEEEEEETTTEEEEEETTTCCEEE
T ss_pred CEEEEEEcCCcEEEEECCCCCcEE
Confidence 689998989999999999987654
No 441
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=97.21 E-value=0.0019 Score=73.59 Aligned_cols=93 Identities=15% Similarity=0.008 Sum_probs=69.0
Q ss_pred ccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCC--cccccccccccceEEecCCCCEEEEEEe-
Q 004989 589 FSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECD--AIINENRDIHYPVVEMASRSKLSSICWN- 665 (720)
Q Consensus 589 ~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~--~~~~~~~~~~~~~~~~~~~~~i~~l~w~- 665 (720)
-.+.++++++.. ...+..++|+|||+++.+++.|++|.+||+. +. ..+.++.....-..++|+
T Consensus 184 ~~t~~v~~~i~~------g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~--------~~v~~i~~G~~P~~ia~s~ 249 (567)
T 1qks_A 184 GSTYEIKTVLDT------GYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEP--------TTVAEIKIGSEARSIETSK 249 (567)
T ss_dssp TTTCCEEEEEEC------SSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSC--------CEEEEEECCSEEEEEEECC
T ss_pred CCCCeEEEEEeC------CCCccceEECCCCCEEEEEcCCCeEEEEECCCCCC--------cEeEEEecCCCCceeEEcc
Confidence 356677777765 3457799999999999889999999999985 33 123344333446799999
Q ss_pred ---cCCCCEEEEEe-CCCcEEEEECCCCcEEEEEE
Q 004989 666 ---SYIKSQIASSN-FEGVVQVGQVLHLIYFSALY 696 (720)
Q Consensus 666 ---~~~~~~laS~s-~D~~v~lWD~~tg~~~~~v~ 696 (720)
|+++ +|+.++ .+++|.|||..|.+.+++|.
T Consensus 250 ~~~pDGk-~l~v~n~~~~~v~ViD~~t~~~~~~i~ 283 (567)
T 1qks_A 250 MEGWEDK-YAIAGAYWPPQYVIMDGETLEPKKIQS 283 (567)
T ss_dssp STTCTTT-EEEEEEEETTEEEEEETTTCCEEEEEE
T ss_pred ccCCCCC-EEEEEEccCCeEEEEECCCCcEEEEEe
Confidence 5655 555555 46999999999999988753
No 442
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=97.18 E-value=0.00031 Score=74.00 Aligned_cols=95 Identities=5% Similarity=-0.022 Sum_probs=68.0
Q ss_pred hchhhhhhcccCCC----CCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHH
Q 004989 63 RKHSDGVELTHGDH----LRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAA 137 (720)
Q Consensus 63 r~~~e~~~L~~l~H----pnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yL 137 (720)
+.++|..+|..+.+ ..+.++++ + + ..|++||| .|.+|..... ..++..+...++.+++..|..|
T Consensus 73 ~~~~E~~~L~~L~~~~~~~~vP~v~~-~---~----~~~lvme~i~G~~l~~~~~---~~l~~~~~~~~~~~l~~~La~L 141 (320)
T 3r70_A 73 SQKRELELYRFLENCKLSYQIPAVVY-Q---S----DRFNIMKYIKGERITYEQY---HKLSEKEKDALAYDEATFLKEL 141 (320)
T ss_dssp HHHHHHHHHHHHTTSCCSSBCCCEEE-E---C----SSCEEEECCCCBCCCHHHH---TTSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCcceEEe-c---C----CcEEEEeecCCcccccccc---ccCCHHHHHHHHHHHHHHHHHH
Confidence 34566666666655 12344444 1 1 34799999 8888864331 2367888888999999999999
Q ss_pred HHCC---------------------------------------------------------------ceeccCCCCcEEE
Q 004989 138 HSQG---------------------------------------------------------------IVVHNVRPSCFVM 154 (720)
Q Consensus 138 Hs~g---------------------------------------------------------------IvHrDLKP~NILl 154 (720)
|+.. ++|+|++|.|||+
T Consensus 142 H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~ 221 (320)
T 3r70_A 142 HSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIF 221 (320)
T ss_dssp HHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEE
T ss_pred hCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEE
Confidence 9532 3999999999999
Q ss_pred ccCCceEEeecCcc
Q 004989 155 SSFNHVSFIESASC 168 (720)
Q Consensus 155 ~~~~~vkliDfg~a 168 (720)
+..+.+.++||+.+
T Consensus 222 ~~~~~~~~iD~~~~ 235 (320)
T 3r70_A 222 RNNRLFGVIDFGDF 235 (320)
T ss_dssp ETTEEEEECCCTTC
T ss_pred ECCceEEEECCccc
Confidence 98656799999987
No 443
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=97.10 E-value=0.00084 Score=70.27 Aligned_cols=102 Identities=7% Similarity=-0.100 Sum_probs=67.7
Q ss_pred hhchhhhhhcccCCCCC---ceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHH
Q 004989 62 LRKHSDGVELTHGDHLR---NQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAA 137 (720)
Q Consensus 62 ~r~~~e~~~L~~l~Hpn---IV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yL 137 (720)
.+..+|..+|..+.+.. |.+++. +... . ....|++||+ .|.+|.+..-. .++..+...++.++...|..|
T Consensus 54 ~~~~~E~~~L~~L~~~~~v~VP~~~~-~~~~-~-~g~~~~v~e~i~G~~l~~~~~~---~l~~~~~~~~~~~lg~~La~L 127 (306)
T 3tdw_A 54 DELNKEIQLLPLLVGCVKVNIPQYVY-IGKR-S-DGNPFVGYRKVQGQILGEDGMA---VLPDDAKDRLALQLAEFMNEL 127 (306)
T ss_dssp HHHHHHHHHHHHHTTTCSSBCCCEEE-EEEC-T-TSCEEEEEECCCSEECHHHHHT---TSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCCCCeEe-eccc-C-CCceEEEEeccCCeECchhhhh---hCCHHHHHHHHHHHHHHHHHH
Confidence 35557777887776532 334444 2221 1 2245799999 88888763211 256666667777777777777
Q ss_pred HHC------------------------------------------------------------CceeccCCCCcEEEcc-
Q 004989 138 HSQ------------------------------------------------------------GIVVHNVRPSCFVMSS- 156 (720)
Q Consensus 138 Hs~------------------------------------------------------------gIvHrDLKP~NILl~~- 156 (720)
|+. .++|+|++|.||+++.
T Consensus 128 H~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~ 207 (306)
T 3tdw_A 128 SAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLN 207 (306)
T ss_dssp HHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTT
T ss_pred hcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecC
Confidence 752 3499999999999987
Q ss_pred --CCce-EEeecCccc
Q 004989 157 --FNHV-SFIESASCS 169 (720)
Q Consensus 157 --~~~v-kliDfg~a~ 169 (720)
++.+ .|+||+.+.
T Consensus 208 ~~~~~~~~~iD~~~a~ 223 (306)
T 3tdw_A 208 SRQTPLTGIIDFGDAA 223 (306)
T ss_dssp CSSCCEEEECCCTTCE
T ss_pred CCCCceEEEEehhhcC
Confidence 4564 799998773
No 444
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=97.06 E-value=0.0019 Score=63.62 Aligned_cols=60 Identities=12% Similarity=0.010 Sum_probs=46.3
Q ss_pred CCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCceeccCCCCcEEEccCCceEEe
Q 004989 104 DVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-QGIVVHNVRPSCFVMSSFNHVSFI 163 (720)
Q Consensus 104 ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs-~gIvHrDLKP~NILl~~~~~vkli 163 (720)
..+|.+.|...+.+++++++|.++.|.+.+|.-+-. ..-..+=+-|..|+|..+|.|.+.
T Consensus 32 ~vSL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~~~~~~~~i~~~~~i~l~~dG~V~f~ 92 (229)
T 2yle_A 32 ALSLEEILRLYNQPINEEQAWAVCYQCCGSLRAAARRRQPRHRVRSAAQIRVWRDGAVTLA 92 (229)
T ss_dssp EEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSGGGEEEETTSCEEEC
T ss_pred cccHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhhcccCCceecCCcceEEecCCceecc
Confidence 458999998888889999999999999999877621 111233345689999999998873
No 445
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.04 E-value=0.0017 Score=68.98 Aligned_cols=93 Identities=10% Similarity=-0.146 Sum_probs=62.5
Q ss_pred CeEEEEECCCCCEEEEeeCC-----CcEEEeeCCcccccccccccceEEecCCCCEEEEEEec-CCCCEEEEEe------
Q 004989 609 LVCSLSFDRDGELFAAAGVN-----KKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNS-YIKSQIASSN------ 676 (720)
Q Consensus 609 ~V~sv~f~~dg~~lat~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~-~~~~~laS~s------ 676 (720)
.|.+++|+|||++||.++.+ +.|.+||+.++.. ..+..+. ... ++|+| +++ +|++++
T Consensus 239 ~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~------~~l~~~~---~~~-~~~s~~dg~-~l~~~~~~~p~~ 307 (396)
T 3c5m_A 239 SCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLEN------EEVMVMP---PCS-HLMSNFDGS-LMVGDGCDAPVD 307 (396)
T ss_dssp EEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCE------EEEEECC---SEE-EEEECSSSS-EEEEEECCC---
T ss_pred cccceEECCCCCEEEEEecCCCCccceEEEEECCCCCe------EEeeeCC---CCC-CCccCCCCc-eEEEecCCccee
Confidence 57889999999988877654 5599999876521 0111111 233 89999 665 777654
Q ss_pred ----------CCCcEEEEECCCCcEEE--E---------------EEEEeecCCceEEEecCc
Q 004989 677 ----------FEGVVQVGQVLHLIYFS--A---------------LYCIVLNKLLIIFRYGMF 712 (720)
Q Consensus 677 ----------~D~~v~lWD~~tg~~~~--~---------------v~~v~~~~~~~~~~~~~~ 712 (720)
.++.|.+||+.+|+... . +.+++|++.+..+.+.+-
T Consensus 308 ~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~ 370 (396)
T 3c5m_A 308 VADADSYNIENDPFLYVLNTKAKSAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSD 370 (396)
T ss_dssp -------CCCCCCEEEEEETTTTBCCEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEEC
T ss_pred eccccccccCCCCcEEEEecccCceEEccCCCCccccccccccCCCCCceEccCCCeEEEEec
Confidence 34789999999886432 1 123688998876665543
No 446
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=97.04 E-value=0.0026 Score=68.88 Aligned_cols=86 Identities=6% Similarity=-0.116 Sum_probs=63.9
Q ss_pred CCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEEC
Q 004989 607 SNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQV 686 (720)
Q Consensus 607 ~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~ 686 (720)
...|.++.+.+.. ||+++.||+|.+||+..... .. ....|+|+||||.+ ++.|..||+|++|+.
T Consensus 126 ~~~v~~i~~~~p~--~av~~~dG~L~v~dl~~~~~--------~~---~~~~Vs~v~WSpkG---~~vg~~dg~i~~~~~ 189 (388)
T 1xip_A 126 EKPVFQLKNVNNT--LVILNSVNDLSALDLRTKST--------KQ---LAQNVTSFDVTNSQ---LAVLLKDRSFQSFAW 189 (388)
T ss_dssp SSCEEEEEECSSE--EEEEETTSEEEEEETTTCCE--------EE---EEESEEEEEECSSE---EEEEETTSCEEEEEE
T ss_pred ecceeeEEecCCC--EEEEECCCCEEEEEccCCcc--------cc---ccCCceEEEEcCCc---eEEEEcCCcEEEEcC
Confidence 4457888877543 99999999999999976521 11 13479999999965 678889999999999
Q ss_pred CCCcE--EE----------------EEEEEeecCCceEEE
Q 004989 687 LHLIY--FS----------------ALYCIVLNKLLIIFR 708 (720)
Q Consensus 687 ~tg~~--~~----------------~v~~v~~~~~~~~~~ 708 (720)
.++++ .. .|.+|.|.+....++
T Consensus 190 ~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv 229 (388)
T 1xip_A 190 RNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLA 229 (388)
T ss_dssp ETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEE
T ss_pred CCccccccceecCCcccccccCCCeeEEEEEEecCCeEEE
Confidence 88774 22 278888876655443
No 447
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=96.93 E-value=0.0013 Score=70.25 Aligned_cols=90 Identities=12% Similarity=0.064 Sum_probs=63.5
Q ss_pred ccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEee----------CCCcEEEeeCCcccccccccccceEEec----
Q 004989 589 FSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAG----------VNKKIKVFECDAIINENRDIHYPVVEMA---- 654 (720)
Q Consensus 589 ~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~----------~d~~i~iwd~~~~~~~~~~~~~~~~~~~---- 654 (720)
-.+.++++++.-| .+. .++|+|||+++.+++ .+++|.+||..+. .++.++.
T Consensus 38 ~~t~~~~~~i~~g-----~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~--------~~~~~i~~~~~ 102 (361)
T 2oiz_A 38 YTNGKFLGMVPTA-----FNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKL--------TFEKEISLPPK 102 (361)
T ss_dssp TTTCCEEEEEECC-----EEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTC--------CEEEEEEECTT
T ss_pred CCCCeEEEEecCC-----CCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCC--------cEEEEEEcCcc
Confidence 3456677777632 233 899999999887775 3778999998764 1222221
Q ss_pred ---CCCCEEEEEEecCCCCEEEEEeC--CCcEEEEECCCCcEEEE
Q 004989 655 ---SRSKLSSICWNSYIKSQIASSNF--EGVVQVGQVLHLIYFSA 694 (720)
Q Consensus 655 ---~~~~i~~l~w~~~~~~~laS~s~--D~~v~lWD~~tg~~~~~ 694 (720)
+......++++|+++ +|+.+.+ +++|.+||+.+++.+.+
T Consensus 103 ~~~~g~~p~~i~~spdg~-~l~v~n~~~~~~v~v~d~~~~~~~~~ 146 (361)
T 2oiz_A 103 RVQGLNYDGLFRQTTDGK-FIVLQNASPATSIGIVDVAKGDYVED 146 (361)
T ss_dssp BCCBCCCGGGEEECTTSS-EEEEEEESSSEEEEEEETTTTEEEEE
T ss_pred ccccCCCcceEEECCCCC-EEEEECCCCCCeEEEEECCCCcEEEE
Confidence 123456789999754 7776664 68999999999998876
No 448
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=96.83 E-value=0.0026 Score=74.25 Aligned_cols=93 Identities=17% Similarity=0.199 Sum_probs=64.9
Q ss_pred CCCCeEEEEECCCCCEEE-----EeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCc
Q 004989 606 SSNLVCSLSFDRDGELFA-----AAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGV 680 (720)
Q Consensus 606 ~~~~V~sv~f~~dg~~la-----t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~ 680 (720)
+...|.+++|||||++|| +|+...+|+|||+.++. .+.......+...++|+ ++ +.|+.+++|..
T Consensus 127 ~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~--------~~~~~~~~~k~~~~~Ws-Dg-~~l~y~~~~~~ 196 (693)
T 3iuj_A 127 GTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQ--------PLETPLKDVKFSGISWL-GN-EGFFYSSYDKP 196 (693)
T ss_dssp SCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCS--------EEEEEEEEEESCCCEEE-TT-TEEEEEESSCC
T ss_pred CcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCC--------CCccccCCceeccEEEe-CC-CEEEEEEecCc
Confidence 345788999999999988 45555799999998862 11111111124678999 65 47777777754
Q ss_pred -------------EEEEECCCCc----EEEE--------EEEEeecCCceEEE
Q 004989 681 -------------VQVGQVLHLI----YFSA--------LYCIVLNKLLIIFR 708 (720)
Q Consensus 681 -------------v~lWD~~tg~----~~~~--------v~~v~~~~~~~~~~ 708 (720)
|.+|++.|++ ++.+ +.++.|++.+..+.
T Consensus 197 ~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~ 249 (693)
T 3iuj_A 197 DGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLL 249 (693)
T ss_dssp C-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEE
T ss_pred ccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEE
Confidence 9999998876 3321 46788999998763
No 449
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=96.75 E-value=0.0059 Score=64.06 Aligned_cols=111 Identities=6% Similarity=-0.030 Sum_probs=75.4
Q ss_pred hccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCC------CE
Q 004989 586 YLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRS------KL 659 (720)
Q Consensus 586 ~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~------~i 659 (720)
...-.++++++++.. ......|+|++||.++++...+++|.+||..+.. .+..+.... ..
T Consensus 68 viD~~t~~~~~~i~~------~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~--------~~~~i~~g~~~~~~~~p 133 (328)
T 3dsm_A 68 AIDINTFKEVGRITG------FTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYE--------ITGYIECPDMDMESGST 133 (328)
T ss_dssp EEETTTCCEEEEEEC------CSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTE--------EEEEEECTTCCTTTCBC
T ss_pred EEECcccEEEEEcCC------CCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCe--------EEEEEEcCCccccCCCc
Confidence 334456677777643 3668999999999878887689999999988751 111121111 45
Q ss_pred EEEEEecCCCCEEEEEe-CCCcEEEEECCCCcEEEEE------EEEeecCCceEEEecCc
Q 004989 660 SSICWNSYIKSQIASSN-FEGVVQVGQVLHLIYFSAL------YCIVLNKLLIIFRYGMF 712 (720)
Q Consensus 660 ~~l~w~~~~~~~laS~s-~D~~v~lWD~~tg~~~~~v------~~v~~~~~~~~~~~~~~ 712 (720)
..+++ . ++.++++.. .+++|.+||..+++.+.++ ..+.+++.+.++...+-
T Consensus 134 ~~i~~-~-~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~p~~i~~~~dG~l~v~~~~ 191 (328)
T 3dsm_A 134 EQMVQ-Y-GKYVYVNCWSYQNRILKIDTETDKVVDELTIGIQPTSLVMDKYNKMWTITDG 191 (328)
T ss_dssp CCEEE-E-TTEEEEEECTTCCEEEEEETTTTEEEEEEECSSCBCCCEECTTSEEEEEBCC
T ss_pred ceEEE-E-CCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCCCccceEEcCCCCEEEEECC
Confidence 56777 2 443444433 5899999999999988773 46788887777766553
No 450
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=96.63 E-value=0.0078 Score=61.55 Aligned_cols=91 Identities=10% Similarity=-0.103 Sum_probs=62.5
Q ss_pred CCCeEEEEECCCCCEEEEeeCCCcEEEeeCC-cccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEE
Q 004989 607 SNLVCSLSFDRDGELFAAAGVNKKIKVFECD-AIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQ 685 (720)
Q Consensus 607 ~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD 685 (720)
...++.++|+|||+++++.+.+++|.+||+. .+. . .....+. ......+.+++|++++ ++.+++ ++.|.+||
T Consensus 171 ~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~--~-~~~~~~~-~~~~~~p~~i~~d~~G-~l~v~~--~~~v~~~~ 243 (296)
T 3e5z_A 171 RVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGE--T-EYQGVHF-TVEPGKTDGLRVDAGG-LIWASA--GDGVHVLT 243 (296)
T ss_dssp CSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSC--E-EEEEEEE-CCSSSCCCSEEEBTTS-CEEEEE--TTEEEEEC
T ss_pred CCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCc--C-cCCCeEe-eCCCCCCCeEEECCCC-CEEEEc--CCeEEEEC
Confidence 4667899999999988888889999999986 221 0 0000011 1123446789999965 565555 78999999
Q ss_pred CCCCcEEEE------EEEEee-cCCce
Q 004989 686 VLHLIYFSA------LYCIVL-NKLLI 705 (720)
Q Consensus 686 ~~tg~~~~~------v~~v~~-~~~~~ 705 (720)
.. |+.+.. +++++| ++.+.
T Consensus 244 ~~-g~~~~~~~~~~~~~~~~f~~~d~~ 269 (296)
T 3e5z_A 244 PD-GDELGRVLTPQTTSNLCFGGPEGR 269 (296)
T ss_dssp TT-SCEEEEEECSSCCCEEEEESTTSC
T ss_pred CC-CCEEEEEECCCCceeEEEECCCCC
Confidence 96 777665 467888 45544
No 451
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=96.61 E-value=0.016 Score=57.89 Aligned_cols=98 Identities=7% Similarity=-0.013 Sum_probs=72.8
Q ss_pred CCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEECC
Q 004989 608 NLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVL 687 (720)
Q Consensus 608 ~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~~ 687 (720)
..+.+|+++++|.++++...++.|.+||........ ....+...+.+|++++++ .+.++...++.|.+||..
T Consensus 150 ~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~-------~~~~~~~~p~~i~~d~~g-~l~v~~~~~~~v~~~~~~ 221 (270)
T 1rwi_B 150 NDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVV-------LPFTDITAPWGIAVDEAG-TVYVTEHNTNQVVKLLAG 221 (270)
T ss_dssp CSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEE-------CCCSSCCSEEEEEECTTC-CEEEEETTTSCEEEECTT
T ss_pred CCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEe-------ecccCCCCceEEEECCCC-CEEEEECCCCcEEEEcCC
Confidence 467899999999998888888999999976541100 001122568899999965 677777778999999997
Q ss_pred CCcEEE-------EEEEEeecCCceEEEecCcc
Q 004989 688 HLIYFS-------ALYCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 688 tg~~~~-------~v~~v~~~~~~~~~~~~~~~ 713 (720)
+..... ..+++++++.+.+++.+..+
T Consensus 222 ~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~ 254 (270)
T 1rwi_B 222 STTSTVLPFTGLNTPLAVAVDSDRTVYVADRGN 254 (270)
T ss_dssp CSCCEECCCCSCSCEEEEEECTTCCEEEEEGGG
T ss_pred CCcceeeccCCCCCceeEEECCCCCEEEEECCC
Confidence 654332 17889999988888877665
No 452
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=96.44 E-value=0.012 Score=61.29 Aligned_cols=91 Identities=13% Similarity=-0.018 Sum_probs=65.5
Q ss_pred CCeEEEEECCCCCEEEEe---------eCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCC
Q 004989 608 NLVCSLSFDRDGELFAAA---------GVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFE 678 (720)
Q Consensus 608 ~~V~sv~f~~dg~~lat~---------~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D 678 (720)
..|.+++| ||+++|.. +.+..|.+||..++. + ..+ ..+.+++|||++ .+||.++.+
T Consensus 15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~--------~-~~l---~~~~~~~~SpDg-~~la~~~~~ 79 (347)
T 2gop_A 15 AYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNA--------R-RFI---ENATMPRISPDG-KKIAFMRAN 79 (347)
T ss_dssp CEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCC--------E-EEE---ESCEEEEECTTS-SEEEEEEEE
T ss_pred EEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCc--------e-EEc---ccCCCeEECCCC-CEEEEEEec
Confidence 55788888 99987764 236789999987651 1 122 458899999965 577776654
Q ss_pred ---Cc--EEEEECCCCcEEEE-----EEEEeecCCceEEEecCcc
Q 004989 679 ---GV--VQVGQVLHLIYFSA-----LYCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 679 ---~~--v~lWD~~tg~~~~~-----v~~v~~~~~~~~~~~~~~~ 713 (720)
+. |.+||+.+|+.... +.+++|+|.+..+.+.+.+
T Consensus 80 ~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~wspdg~~l~~~~~~ 124 (347)
T 2gop_A 80 EEKKVSEIWVADLETLSSKKILEAKNIRSLEWNEDSRKLLIVGFK 124 (347)
T ss_dssp TTTTEEEEEEEETTTTEEEEEEEESEEEEEEECTTSSEEEEEEEC
T ss_pred cCCCcceEEEEECCCCceEEEEcCCCccceeECCCCCEEEEEEcc
Confidence 33 77789998876543 6789999999888887653
No 453
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=96.41 E-value=0.032 Score=57.76 Aligned_cols=99 Identities=10% Similarity=-0.027 Sum_probs=64.4
Q ss_pred CCCeEEEEECCCCCEEEEeeCC----CcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeC-----
Q 004989 607 SNLVCSLSFDRDGELFAAAGVN----KKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNF----- 677 (720)
Q Consensus 607 ~~~V~sv~f~~dg~~lat~~~d----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~----- 677 (720)
.+.|.+++|+|||.+++++..+ +.|.+||..+..... .+........+.+++|+|++ .+++++..
T Consensus 86 ~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~-----~~~~~~~~~~~~~i~~d~~g-~l~v~~~~~~~~~ 159 (333)
T 2dg1_A 86 KANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQD-----IIEDLSTAYCIDDMVFDSKG-GFYFTDFRGYSTN 159 (333)
T ss_dssp SSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEE-----EECSSSSCCCEEEEEECTTS-CEEEEECCCBTTB
T ss_pred CCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEE-----EEccCccCCcccceEECCCC-CEEEEeccccccC
Confidence 5679999999999998887766 799999987642110 00001123568999999965 56666554
Q ss_pred -CCcEEEEECCCCcEEEE------EEEEeecCCce-EEEecC
Q 004989 678 -EGVVQVGQVLHLIYFSA------LYCIVLNKLLI-IFRYGM 711 (720)
Q Consensus 678 -D~~v~lWD~~tg~~~~~------v~~v~~~~~~~-~~~~~~ 711 (720)
.+.|..||..+++.... ..+++|++.+. ++..++
T Consensus 160 ~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~ 201 (333)
T 2dg1_A 160 PLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTET 201 (333)
T ss_dssp CCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEG
T ss_pred CCceEEEEeCCCCEEEEeecCCCcccceEECCCCCEEEEEeC
Confidence 24455556666554321 57889999875 444443
No 454
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=96.26 E-value=0.022 Score=58.52 Aligned_cols=93 Identities=10% Similarity=0.101 Sum_probs=65.3
Q ss_pred CCeEEEEECCCCCE-EEEeeCCCcEEEeeCC--cccccccccccceEEecC-CCCEEEEEEecCCCCEEEEEeCCCcEEE
Q 004989 608 NLVCSLSFDRDGEL-FAAAGVNKKIKVFECD--AIINENRDIHYPVVEMAS-RSKLSSICWNSYIKSQIASSNFEGVVQV 683 (720)
Q Consensus 608 ~~V~sv~f~~dg~~-lat~~~d~~i~iwd~~--~~~~~~~~~~~~~~~~~~-~~~i~~l~w~~~~~~~laS~s~D~~v~l 683 (720)
...+.++|+|||+. +++.+.+++|.+||+. ++... . ...+..+.. ......+++.+++ ++.++...++.|.+
T Consensus 149 ~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~--~-~~~~~~~~~~~~~p~g~~~d~~G-~lwva~~~~~~v~~ 224 (297)
T 3g4e_A 149 DISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQIS--N-RRSVYKLEKEEQIPDGMCIDAEG-KLWVACYNGGRVIR 224 (297)
T ss_dssp SBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEE--E-EEEEEECCGGGCEEEEEEEBTTS-CEEEEEETTTEEEE
T ss_pred ccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCccc--C-cEEEEECCCCCCCCCeeEECCCC-CEEEEEcCCCEEEE
Confidence 45689999999985 5777778999999974 22100 0 011122221 3457899999965 67777666788999
Q ss_pred EECCCCcEEEE-------EEEEeec-CCc
Q 004989 684 GQVLHLIYFSA-------LYCIVLN-KLL 704 (720)
Q Consensus 684 WD~~tg~~~~~-------v~~v~~~-~~~ 704 (720)
||..+|+.+.+ ++|++|. +.+
T Consensus 225 ~d~~tG~~~~~i~~p~~~~t~~~f~g~d~ 253 (297)
T 3g4e_A 225 LDPVTGKRLQTVKLPVDKTTSCCFGGKNY 253 (297)
T ss_dssp ECTTTCCEEEEEECSSSBEEEEEEESGGG
T ss_pred EcCCCceEEEEEECCCCCceEEEEeCCCC
Confidence 99999998876 7899997 543
No 455
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=96.23 E-value=0.0096 Score=64.27 Aligned_cols=92 Identities=16% Similarity=0.104 Sum_probs=63.9
Q ss_pred cccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEee----------CCCcEEEeeCCcccccccccccceEEec--C
Q 004989 588 SFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAG----------VNKKIKVFECDAIINENRDIHYPVVEMA--S 655 (720)
Q Consensus 588 ~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~----------~d~~i~iwd~~~~~~~~~~~~~~~~~~~--~ 655 (720)
.-.++++++++..| ... . ++|+|||+++..++ .+..|.+||..+. ..+..+. .
T Consensus 65 D~~t~~v~~~I~vG-----~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~--------~v~~~I~v~~ 129 (386)
T 3sjl_D 65 DGEAGRVIGMIDGG-----FLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTL--------LPTADIELPD 129 (386)
T ss_dssp ETTTTEEEEEEEEC-----SSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC--------CEEEEEEETT
T ss_pred ECCCCeEEEEEECC-----CCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCC--------eEEEEEECCC
Confidence 34578888888753 222 4 99999999765543 4788999999876 1232221 1
Q ss_pred ------CCCEEEEEEecCCCCEEEEEeC--CCcEEEEECCCCcEEEEE
Q 004989 656 ------RSKLSSICWNSYIKSQIASSNF--EGVVQVGQVLHLIYFSAL 695 (720)
Q Consensus 656 ------~~~i~~l~w~~~~~~~laS~s~--D~~v~lWD~~tg~~~~~v 695 (720)
...-..+.++|+++ +|..+.. +++|.|+|+.+++.+.+|
T Consensus 130 g~r~~~g~~P~~~a~spDGk-~lyVan~~~~~~VsVID~~t~~vv~tI 176 (386)
T 3sjl_D 130 APRFLVGTYPWMTSLTPDGK-TLLFYQFSPAPAVGVVDLEGKAFKRML 176 (386)
T ss_dssp CCCCCBSCCGGGEEECTTSS-EEEEEECSSSCEEEEEETTTTEEEEEE
T ss_pred ccccccCCCCceEEEcCCCC-EEEEEEcCCCCeEEEEECCCCcEEEEE
Confidence 11345689999765 5555543 789999999999999885
No 456
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=96.15 E-value=0.02 Score=58.68 Aligned_cols=82 Identities=9% Similarity=-0.115 Sum_probs=61.5
Q ss_pred CCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCC--CCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-
Q 004989 618 DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASR--SKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA- 694 (720)
Q Consensus 618 dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~--~~i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~- 694 (720)
.|++|++++.|++|.+||.+++ ..+..+... ..+.++.+.|+ +++|+ ++++.|..||. +|+.+-+
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG--------~~~w~~~~~~~~~~~~~~~~pd-G~ilv--s~~~~V~~~d~-~G~~~W~~ 71 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTK--------EIVWEYPLEKGWECNSVAATKA-GEILF--SYSKGAKMITR-DGRELWNI 71 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTT--------EEEEEEECCTTCCCCEEEECTT-SCEEE--ECBSEEEEECT-TSCEEEEE
T ss_pred CCcEEEeeCCCCEEEEEECCCC--------eEEEEeCCCccCCCcCeEECCC-CCEEE--eCCCCEEEECC-CCCEEEEE
Confidence 5689999999999999998776 234444432 35889999995 56888 35788999999 8887765
Q ss_pred -------EEEEeecCCceEEEecC
Q 004989 695 -------LYCIVLNKLLIIFRYGM 711 (720)
Q Consensus 695 -------v~~v~~~~~~~~~~~~~ 711 (720)
+.++.+.+.+.++..++
T Consensus 72 ~~~~~~~~~~~~~~~dG~~lv~~~ 95 (276)
T 3no2_A 72 AAPAGCEMQTARILPDGNALVAWC 95 (276)
T ss_dssp ECCTTCEEEEEEECTTSCEEEEEE
T ss_pred cCCCCccccccEECCCCCEEEEec
Confidence 45677778777776654
No 457
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=96.14 E-value=0.03 Score=57.32 Aligned_cols=93 Identities=2% Similarity=-0.110 Sum_probs=67.9
Q ss_pred CCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEECC
Q 004989 608 NLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVL 687 (720)
Q Consensus 608 ~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~~ 687 (720)
.....+++.+||.++++.+.+++|.+||.. + ..+..+.......++...++ +++|++++.++.|..+|..
T Consensus 125 ~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G--------~~~w~~~~~~~~~~~~~~~~-g~~~v~~~~~~~v~~~d~~ 194 (276)
T 3no2_A 125 AQFRQINKNKKGNYLVPLFATSEVREIAPN-G--------QLLNSVKLSGTPFSSAFLDN-GDCLVACGDAHCFVQLNLE 194 (276)
T ss_dssp GSCSCCEECTTSCEEEEETTTTEEEEECTT-S--------CEEEEEECSSCCCEEEECTT-SCEEEECBTTSEEEEECTT
T ss_pred ccccCceECCCCCEEEEecCCCEEEEECCC-C--------CEEEEEECCCCccceeEcCC-CCEEEEeCCCCeEEEEeCc
Confidence 345667899999999999999999999976 5 23444443445667788874 5688888888899999999
Q ss_pred CCcEEEEE-------------EEEeecCCceEEEec
Q 004989 688 HLIYFSAL-------------YCIVLNKLLIIFRYG 710 (720)
Q Consensus 688 tg~~~~~v-------------~~v~~~~~~~~~~~~ 710 (720)
||+.+-++ .++...+.+.+++.+
T Consensus 195 tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~ 230 (276)
T 3no2_A 195 SNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICN 230 (276)
T ss_dssp TCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEE
T ss_pred CCcEEEEecCCCCCCccccccccceEcCCCCEEEEe
Confidence 99987653 344445555555543
No 458
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=96.04 E-value=0.025 Score=59.19 Aligned_cols=103 Identities=11% Similarity=-0.007 Sum_probs=70.8
Q ss_pred ceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCC----------CcEEEeeCCcccccccccccceEEe--cCCCC
Q 004989 591 KLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVN----------KKIKVFECDAIINENRDIHYPVVEM--ASRSK 658 (720)
Q Consensus 591 ~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d----------~~i~iwd~~~~~~~~~~~~~~~~~~--~~~~~ 658 (720)
+.+++.++.. ......++|+|||++++++..+ ++|.+||..+.. .+..+ .....
T Consensus 161 t~~~~~~i~~------g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~--------v~~~~~~~~g~~ 226 (328)
T 3dsm_A 161 TDKVVDELTI------GIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFT--------VEKQFKFKLGDW 226 (328)
T ss_dssp TTEEEEEEEC------SSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTE--------EEEEEECCTTCC
T ss_pred CCeEEEEEEc------CCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCe--------EEEEEecCCCCC
Confidence 4455555543 2335688999999988877655 899999987651 11122 11236
Q ss_pred EEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEE---------EEEEEeecC-CceEEEec
Q 004989 659 LSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFS---------ALYCIVLNK-LLIIFRYG 710 (720)
Q Consensus 659 i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~---------~v~~v~~~~-~~~~~~~~ 710 (720)
...++|+|+++ .|..++. +|.+||+.+++... ..++++++| .+.+++.+
T Consensus 227 p~~la~~~d~~-~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~ 285 (328)
T 3dsm_A 227 PSEVQLNGTRD-TLYWINN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVAD 285 (328)
T ss_dssp CEEEEECTTSC-EEEEESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEE
T ss_pred ceeEEEecCCC-EEEEEcc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEc
Confidence 78999999665 5655543 99999999887531 268899998 77777776
No 459
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=96.00 E-value=0.042 Score=54.73 Aligned_cols=98 Identities=9% Similarity=0.056 Sum_probs=71.3
Q ss_pred CCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEECC
Q 004989 608 NLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVL 687 (720)
Q Consensus 608 ~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~~ 687 (720)
..+.+++|+++|.++++...++.|.+||..+.... .....+...+.+|+++|++ +++++...++.|.+||..
T Consensus 108 ~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~-------~~~~~~~~~p~~i~~~~~g-~l~v~~~~~~~i~~~~~~ 179 (270)
T 1rwi_B 108 NYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQT-------VLPFTGLNDPDGVAVDNSG-NVYVTDTDNNRVVKLEAE 179 (270)
T ss_dssp SSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCE-------ECCCCSCCSCCCEEECTTC-CEEEEEGGGTEEEEECTT
T ss_pred CCCcceEECCCCCEEEEECCCCEEEEEECCCceeE-------eeccccCCCceeEEEeCCC-CEEEEECCCCEEEEEecC
Confidence 56899999999999988888999999986543110 0011122357889999965 577777778999999998
Q ss_pred CCcEEEE-------EEEEeecCCceEEEecCcc
Q 004989 688 HLIYFSA-------LYCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 688 tg~~~~~-------v~~v~~~~~~~~~~~~~~~ 713 (720)
++..... ..++++++.+.+++.+..+
T Consensus 180 ~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~ 212 (270)
T 1rwi_B 180 SNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNT 212 (270)
T ss_dssp TCCEEECCCSSCCSEEEEEECTTCCEEEEETTT
T ss_pred CCceEeecccCCCCceEEEECCCCCEEEEECCC
Confidence 7765432 6788999988777766543
No 460
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=95.95 E-value=0.032 Score=56.95 Aligned_cols=101 Identities=7% Similarity=-0.110 Sum_probs=67.3
Q ss_pred CCeEEEEECCCCCEEEE-------eeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCc
Q 004989 608 NLVCSLSFDRDGELFAA-------AGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGV 680 (720)
Q Consensus 608 ~~V~sv~f~~dg~~lat-------~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~ 680 (720)
....+++|+++|.++++ +..++.|.+||..+....... .|- .......+.+++|+++.+.+++++. +..
T Consensus 18 ~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~--~~~-~~~~~~~~~~i~~~~~~g~l~v~~~-~~~ 93 (314)
T 1pjx_A 18 PGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVIC--KPE-VNGYGGIPAGCQCDRDANQLFVADM-RLG 93 (314)
T ss_dssp TTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEE--CCE-ETTEECCEEEEEECSSSSEEEEEET-TTE
T ss_pred CCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEE--ecc-cCCCCCCCceEEEecCCCcEEEEEC-CCC
Confidence 45789999999999888 778999999997654211000 000 0001346899999996344455444 447
Q ss_pred EEEEECCCCcEEEE------------EEEEeecCCceEEEecCcc
Q 004989 681 VQVGQVLHLIYFSA------------LYCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 681 v~lWD~~tg~~~~~------------v~~v~~~~~~~~~~~~~~~ 713 (720)
|.+||.. |+.... ++++++.+.+.++..++-+
T Consensus 94 l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~ 137 (314)
T 1pjx_A 94 LLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAG 137 (314)
T ss_dssp EEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBC
T ss_pred EEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCc
Confidence 8899988 765321 5688898888887776543
No 461
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=95.90 E-value=0.0022 Score=68.16 Aligned_cols=30 Identities=10% Similarity=0.180 Sum_probs=25.1
Q ss_pred CCceeccCCCCcEEEccCCceEEeecCccc
Q 004989 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCS 169 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~ 169 (720)
..++|+|++|.|||++..+.+.|+||+.+.
T Consensus 222 ~~l~HgDl~~~Nil~~~~~~~~vIDwe~a~ 251 (357)
T 3ats_A 222 PVLLWGDARVGNVLYRDFQPVAVLDWEMVA 251 (357)
T ss_dssp CEEECSSCSGGGEEEETTEEEEECCGGGCE
T ss_pred ceEEeCCCCCCeEEEeCCcEEEEEcccccc
Confidence 478999999999999854457899998873
No 462
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=95.87 E-value=0.032 Score=59.84 Aligned_cols=86 Identities=3% Similarity=-0.145 Sum_probs=60.7
Q ss_pred eEEEEECCCCCEEEEee----------CCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEe-CC
Q 004989 610 VCSLSFDRDGELFAAAG----------VNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSN-FE 678 (720)
Q Consensus 610 V~sv~f~~dg~~lat~~----------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s-~D 678 (720)
..-++|+|||..+-.+. .++.|-|+|..+. ..+..+.......++.|+|+++.+|+++. .+
T Consensus 269 ~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~--------~vv~~i~~g~~p~~i~~s~Dg~~~l~v~~~~~ 340 (373)
T 2mad_H 269 WQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVG--------QTSSQISLGHDVDAISVAQDGGPDLYALSAGT 340 (373)
T ss_pred eEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCC--------EEEEEEECCCCcCeEEECCCCCeEEEEEcCCC
Confidence 44588999998543332 2468999998775 23344443445789999997765777777 49
Q ss_pred CcEEEEECCCCcEEEEEEEEeecCC
Q 004989 679 GVVQVGQVLHLIYFSALYCIVLNKL 703 (720)
Q Consensus 679 ~~v~lWD~~tg~~~~~v~~v~~~~~ 703 (720)
++|.|||+.|++.+.++-.+.-.|.
T Consensus 341 ~~V~ViD~~t~~vv~~i~~vG~~P~ 365 (373)
T 2mad_H 341 EVLHIYDAGAGDQDQSTVELGSGPQ 365 (373)
T ss_pred CeEEEEECCCCCEEeeecCCCCCCc
Confidence 9999999999999987533443444
No 463
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=95.73 E-value=0.0048 Score=66.19 Aligned_cols=29 Identities=7% Similarity=0.075 Sum_probs=25.3
Q ss_pred CCceeccCCCCcEEEccCCceEEeecCcc
Q 004989 140 QGIVVHNVRPSCFVMSSFNHVSFIESASC 168 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a 168 (720)
..++|+|++|.||+++..+.+.|+||+.+
T Consensus 213 ~~l~HgDl~~~Nil~~~~~~~~viD~~~~ 241 (362)
T 3ovc_A 213 RHLVHADFGSNNVLTDNGRITAVIDWSEA 241 (362)
T ss_dssp CEEECSSCSSTTEEEETTEEEEECCCTTC
T ss_pred cEEEeCCCCCCeEEEeCCCEEEEECCccc
Confidence 35799999999999987777789999987
No 464
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=95.66 E-value=0.074 Score=55.85 Aligned_cols=87 Identities=9% Similarity=-0.017 Sum_probs=57.3
Q ss_pred CCCCCeEEEEECCCCCEEEEeeC-----CCcEEEeeCCccc-ccccccccceEEecCCCCEEEEEEecCCCCEEEEEe--
Q 004989 605 NSSNLVCSLSFDRDGELFAAAGV-----NKKIKVFECDAII-NENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSN-- 676 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~~lat~~~-----d~~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s-- 676 (720)
++-..+.+|+|+++|.++++... +.+|.+||+.+.. ........++ ....+.+..|+++|.++...++.+
T Consensus 64 ~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~--~~~~~~~~~v~vd~~~g~~yvtd~~~ 141 (343)
T 2qe8_A 64 ITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPI--TLSNSFVNDLAVDLIHNFVYISDPAP 141 (343)
T ss_dssp CCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTT--SCTTCCCCEEEEETTTTEEEEEECCS
T ss_pred cceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhh--cccccccceEEEecCCCEEEEEcCcc
Confidence 45678999999999998776543 6899999987652 0000000000 011235689999986665555555
Q ss_pred -CCCcEEEEECCCCcEEE
Q 004989 677 -FEGVVQVGQVLHLIYFS 693 (720)
Q Consensus 677 -~D~~v~lWD~~tg~~~~ 693 (720)
.++.|.+||..+|+...
T Consensus 142 ~~~~~i~v~d~~~g~~~r 159 (343)
T 2qe8_A 142 DDKAALIRVDLQTGLAAR 159 (343)
T ss_dssp GGGCEEEEEETTTCCEEE
T ss_pred CCCCeEEEEECCCCCEEE
Confidence 68899999998876544
No 465
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=95.56 E-value=0.013 Score=59.30 Aligned_cols=94 Identities=9% Similarity=-0.049 Sum_probs=60.7
Q ss_pred hhhhhcccCC-CCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---
Q 004989 66 SDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ--- 140 (720)
Q Consensus 66 ~e~~~L~~l~-HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~--- 140 (720)
+|...|..+. +--|.+++. +..++. ..|+|||+ .|.++.+.... .......+..++...|..||+.
T Consensus 68 ~E~~~l~~l~~~vPVP~v~~-~~~~~~---~~~lvme~l~G~~~~~~~~~-----~~~~~~~~~~~l~~~L~~Lh~~~~~ 138 (272)
T 4gkh_A 68 DEMVRLNWLTAFMPLPTIKH-FIRTPD---DAWLLTTAIPGKTAFQVLEE-----YPDSGENIVDALAVFLRRLHSIPVC 138 (272)
T ss_dssp HHHHHHHHHTTTSCCCCEEE-EEEETT---EEEEEEECCCSEEHHHHHHH-----CGGGHHHHHHHHHHHHHHHHTSCGG
T ss_pred HHHHHHHHhccCCCcCeEEE-EEEECC---eEEEEEEeeCCccccccccC-----CHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 4555555442 112345555 334442 56999999 88888776522 1122344566666666666631
Q ss_pred -------------------------------------------------------CceeccCCCCcEEEccCCceEEeec
Q 004989 141 -------------------------------------------------------GIVVHNVRPSCFVMSSFNHVSFIES 165 (720)
Q Consensus 141 -------------------------------------------------------gIvHrDLKP~NILl~~~~~vkliDf 165 (720)
.++|+|+.|.|||++..+.+-|+||
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDw 218 (272)
T 4gkh_A 139 NCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDV 218 (272)
T ss_dssp GCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCC
T ss_pred cCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEEC
Confidence 2789999999999987766779999
Q ss_pred Ccc
Q 004989 166 ASC 168 (720)
Q Consensus 166 g~a 168 (720)
+.+
T Consensus 219 e~a 221 (272)
T 4gkh_A 219 GRV 221 (272)
T ss_dssp TTC
T ss_pred ccc
Confidence 887
No 466
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=95.53 E-value=0.052 Score=61.75 Aligned_cols=83 Identities=6% Similarity=-0.071 Sum_probs=63.6
Q ss_pred ECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEECC--CCcEE
Q 004989 615 FDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVL--HLIYF 692 (720)
Q Consensus 615 f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~~--tg~~~ 692 (720)
.+|++.++++...+++|.|||..+. ..+..+.....+.++.|+|++ .+|+.++.|+.|.+||+. +++.+
T Consensus 163 ~d~~~~~~V~~~~~~~V~viD~~t~--------~v~~~i~~g~~p~~v~~SpDG-r~lyv~~~dg~V~viD~~~~t~~~v 233 (567)
T 1qks_A 163 WDLENLFSVTLRDAGQIALIDGSTY--------EIKTVLDTGYAVHISRLSASG-RYLFVIGRDGKVNMIDLWMKEPTTV 233 (567)
T ss_dssp CCGGGEEEEEETTTTEEEEEETTTC--------CEEEEEECSSCEEEEEECTTS-CEEEEEETTSEEEEEETTSSSCCEE
T ss_pred cCCCceEEEEeCCCCeEEEEECCCC--------eEEEEEeCCCCccceEECCCC-CEEEEEcCCCeEEEEECCCCCCcEe
Confidence 4466678999999999999998775 233344444467799999965 578888899999999996 88888
Q ss_pred EEE------EEEeec----CCceE
Q 004989 693 SAL------YCIVLN----KLLII 706 (720)
Q Consensus 693 ~~v------~~v~~~----~~~~~ 706 (720)
.++ ..++|+ |.+..
T Consensus 234 ~~i~~G~~P~~ia~s~~~~pDGk~ 257 (567)
T 1qks_A 234 AEIKIGSEARSIETSKMEGWEDKY 257 (567)
T ss_dssp EEEECCSEEEEEEECCSTTCTTTE
T ss_pred EEEecCCCCceeEEccccCCCCCE
Confidence 774 678888 46643
No 467
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=95.46 E-value=0.12 Score=56.03 Aligned_cols=92 Identities=9% Similarity=0.009 Sum_probs=65.1
Q ss_pred CCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCC--cEEEEE
Q 004989 608 NLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEG--VVQVGQ 685 (720)
Q Consensus 608 ~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~--~v~lWD 685 (720)
+....|+|+++|.++++...+++|++||..+.. ............ ++|+|++ +.|+.++.++ .|.+||
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~--------~~~~~~~~~~~~-ia~~~~g-~~l~~~d~~~~~~I~~~d 200 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNK--------VTTVHPGFKGGK-PAVTKDK-QRVYSIGWEGTHTVYVYM 200 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTE--------EEEEEETCCBCB-CEECTTS-SEEEEEBSSTTCEEEEEE
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCE--------EEEeeccCCCCc-eeEecCC-CcEEEEecCCCceEEEEE
Confidence 468899999999999998889999999987641 111111122233 9999964 5888888876 788889
Q ss_pred CCCCcEEEE-----------EEEEeecC-CceEEEe
Q 004989 686 VLHLIYFSA-----------LYCIVLNK-LLIIFRY 709 (720)
Q Consensus 686 ~~tg~~~~~-----------v~~v~~~~-~~~~~~~ 709 (720)
..++..... .+++++++ .+.++..
T Consensus 201 ~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~ 236 (409)
T 3hrp_A 201 KASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFV 236 (409)
T ss_dssp GGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEE
T ss_pred cCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEE
Confidence 876654322 45788888 6666664
No 468
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=95.35 E-value=0.037 Score=59.34 Aligned_cols=75 Identities=5% Similarity=-0.128 Sum_probs=53.3
Q ss_pred EEECCCCCEEE-Eee---C-----CCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEe-CCCcEE
Q 004989 613 LSFDRDGELFA-AAG---V-----NKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSN-FEGVVQ 682 (720)
Q Consensus 613 v~f~~dg~~la-t~~---~-----d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s-~D~~v~ 682 (720)
++|+|||+.+- +.. . +..+.|||..+.. .+..+.......++.|+|+++.++++.. .+++|.
T Consensus 269 v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~--------vv~~i~vg~~p~gi~~s~Dg~~l~va~~~~~~~Vs 340 (368)
T 1mda_H 269 VAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQ--------TSGPISNGHDSDAIIAAQDGASDNYANSAGTEVLD 340 (368)
T ss_dssp EEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCC--------EEECCEEEEEECEEEECCSSSCEEEEEETTTTEEE
T ss_pred eEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCe--------EEEEEECCCCcceEEECCCCCEEEEEccCCCCeEE
Confidence 68999998643 322 1 2345599988752 1222211224789999998877788888 599999
Q ss_pred EEECCCCcEEEEE
Q 004989 683 VGQVLHLIYFSAL 695 (720)
Q Consensus 683 lWD~~tg~~~~~v 695 (720)
|||+.|++.+.+|
T Consensus 341 VID~~t~kvv~~I 353 (368)
T 1mda_H 341 IYDAASDQDQSSV 353 (368)
T ss_dssp EEESSSCEEEEEC
T ss_pred EEECCCCcEEEEE
Confidence 9999999999884
No 469
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=95.28 E-value=0.33 Score=48.58 Aligned_cols=97 Identities=12% Similarity=-0.024 Sum_probs=68.7
Q ss_pred CCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCCcEEEE
Q 004989 606 SSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGVVQVG 684 (720)
Q Consensus 606 ~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~w~~~~~~~laS~s~D~~v~lW 684 (720)
+.+.+.+|+++++|.++++...++.|.+||.. .... .... .....+.++++++++ .+.++...++.|..|
T Consensus 13 ~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~-------~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~ 83 (299)
T 2z2n_A 13 QDTGPYGITVSDKGKVWITQHKANMISCINLD-GKIT-------EYPLPTPDAKVMCLTISSDG-EVWFTENAANKIGRI 83 (299)
T ss_dssp SSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEE-------EEECSSTTCCEEEEEECTTS-CEEEEETTTTEEEEE
T ss_pred cCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeE-------EecCCcccCceeeEEECCCC-CEEEeCCCCCeEEEE
Confidence 35789999999999998887778999999976 3100 0011 124568999999854 577776668899999
Q ss_pred ECCCCcEEE--------EEEEEeecCCceEEEecCc
Q 004989 685 QVLHLIYFS--------ALYCIVLNKLLIIFRYGMF 712 (720)
Q Consensus 685 D~~tg~~~~--------~v~~v~~~~~~~~~~~~~~ 712 (720)
|.. |+... .+.++++.+.+.++..++.
T Consensus 84 ~~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~ 118 (299)
T 2z2n_A 84 TKK-GIIKEYTLPNPDSAPYGITEGPNGDIWFTEMN 118 (299)
T ss_dssp CTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETT
T ss_pred CCC-CcEEEEeCCCcCCCceeeEECCCCCEEEEecC
Confidence 986 43211 1678888887777776543
No 470
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=95.27 E-value=0.092 Score=56.24 Aligned_cols=90 Identities=12% Similarity=0.015 Sum_probs=62.0
Q ss_pred cccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEee----------CCCcEEEeeCCcccccccccccceEEecC--
Q 004989 588 SFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAG----------VNKKIKVFECDAIINENRDIHYPVVEMAS-- 655 (720)
Q Consensus 588 ~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~----------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-- 655 (720)
...+++++.++..| .. ..++|+|||+++..+. .+.+|.+||..+.. ++..+..
T Consensus 53 D~~t~~~~~~i~~g-----~~--p~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~--------~~~~i~~~~ 117 (373)
T 2mad_H 53 DAGSGSILGHVNGG-----FL--PNPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFL--------PIADIELPD 117 (373)
T ss_pred ECCCCeEEEEecCC-----CC--CCeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCc--------EEEEEECCC
Confidence 34577888888753 12 2899999999876664 47889999987641 1221110
Q ss_pred ------CCCEEEEEEecCCCCEEEEEeC--CCcEEEEECCCCcEEEE
Q 004989 656 ------RSKLSSICWNSYIKSQIASSNF--EGVVQVGQVLHLIYFSA 694 (720)
Q Consensus 656 ------~~~i~~l~w~~~~~~~laS~s~--D~~v~lWD~~tg~~~~~ 694 (720)
...-..+.|+|+++ +|+.+.. +++|.++| .+++.+.+
T Consensus 118 ~~~~~~g~~p~~~~~spDG~-~l~v~n~~~~~~v~viD-~t~~~~~~ 162 (373)
T 2mad_H 118 APRFDVGPYSWMNANTPNNA-DLLFFQFAAGPAVGLVV-QGGSSDDQ 162 (373)
T ss_pred ccccccCCCccceEECCCCC-EEEEEecCCCCeEEEEE-CCCCEEeE
Confidence 12235789999765 6665553 58899999 99998877
No 471
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=95.23 E-value=0.33 Score=48.52 Aligned_cols=95 Identities=14% Similarity=-0.022 Sum_probs=69.0
Q ss_pred CCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCEEEEEEecCCCCEEEEEeCCCcEEEEE
Q 004989 607 SNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEGVVQVGQ 685 (720)
Q Consensus 607 ~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD 685 (720)
...+.+|+++++|.++++...++.|..||..... ....+. ....+.++++.|++ .+.++...++.|.+||
T Consensus 56 ~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~--------~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~d 126 (299)
T 2z2n_A 56 DAKVMCLTISSDGEVWFTENAANKIGRITKKGII--------KEYTLPNPDSAPYGITEGPNG-DIWFTEMNGNRIGRIT 126 (299)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTTSCE--------EEEECSSTTCCEEEEEECTTS-CEEEEETTTTEEEEEC
T ss_pred cCceeeEEECCCCCEEEeCCCCCeEEEECCCCcE--------EEEeCCCcCCCceeeEECCCC-CEEEEecCCceEEEEC
Confidence 4679999999999998888778999999975211 001111 24468999999854 5777777788999999
Q ss_pred CCCCcEEEE--------EEEEeecCCceEEEecC
Q 004989 686 VLHLIYFSA--------LYCIVLNKLLIIFRYGM 711 (720)
Q Consensus 686 ~~tg~~~~~--------v~~v~~~~~~~~~~~~~ 711 (720)
. +|+.... +.++++.+.+.++..+.
T Consensus 127 ~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~ 159 (299)
T 2z2n_A 127 D-DGKIREYELPNKGSYPSFITLGSDNALWFTEN 159 (299)
T ss_dssp T-TCCEEEEECSSTTCCEEEEEECTTSCEEEEET
T ss_pred C-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeC
Confidence 9 6654432 67888888877777654
No 472
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=95.16 E-value=0.093 Score=53.42 Aligned_cols=74 Identities=19% Similarity=0.165 Sum_probs=54.8
Q ss_pred CCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCEEEEEEecCCCCEEEEEeCCCcEEEEEC
Q 004989 608 NLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEGVVQVGQV 686 (720)
Q Consensus 608 ~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~ 686 (720)
..+..++|+++|.++++...++.|.+||..++. .+..+. +...+.+++|+|++..+.+++..++.|..||+
T Consensus 226 ~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~--------~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~ 297 (314)
T 1pjx_A 226 GGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQ--------PKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEW 297 (314)
T ss_dssp CEEEEEEEBTTCCEEEEEETTTEEEEECTTCBS--------CSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEEC
T ss_pred CCCCceEECCCCCEEEEEcCCCEEEEEcCCCCc--------EeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeC
Confidence 567899999999999988889999999987441 111122 23568999999865435566666789999998
Q ss_pred CCC
Q 004989 687 LHL 689 (720)
Q Consensus 687 ~tg 689 (720)
.+.
T Consensus 298 ~~~ 300 (314)
T 1pjx_A 298 QRN 300 (314)
T ss_dssp SSC
T ss_pred CCC
Confidence 753
No 473
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=95.09 E-value=0.13 Score=59.72 Aligned_cols=95 Identities=5% Similarity=-0.166 Sum_probs=59.7
Q ss_pred CCCCeEEEEECCCCCEEEEeeCCC----cEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeC---C
Q 004989 606 SSNLVCSLSFDRDGELFAAAGVNK----KIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNF---E 678 (720)
Q Consensus 606 ~~~~V~sv~f~~dg~~lat~~~d~----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~---D 678 (720)
+...+.+++|+|||++||.++.++ .|.+||..+. .+.....+...+....| ++++ ++++++. +
T Consensus 225 ~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~--------~~~~l~~~~~~~~~~~~-~~g~-l~~~s~~~~~~ 294 (695)
T 2bkl_A 225 DPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEK--------DFRLLVKGVGAKYEVHA-WKDR-FYVLTDEGAPR 294 (695)
T ss_dssp CTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCS--------SCEEEEECSSCCEEEEE-ETTE-EEEEECTTCTT
T ss_pred CCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCC--------ceEEeecCCCceEEEEe-cCCc-EEEEECCCCCC
Confidence 456899999999999988887776 5666654322 11222223345566667 5566 7777763 5
Q ss_pred CcEEEEECCCCcE-----EE------EEEEEeecCCceEEEecC
Q 004989 679 GVVQVGQVLHLIY-----FS------ALYCIVLNKLLIIFRYGM 711 (720)
Q Consensus 679 ~~v~lWD~~tg~~-----~~------~v~~v~~~~~~~~~~~~~ 711 (720)
+.|.+||+.+++. +. .+..++|+ ...++.+.+
T Consensus 295 ~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~ 337 (695)
T 2bkl_A 295 QRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYL 337 (695)
T ss_dssp CEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEE
T ss_pred CEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEE
Confidence 8999999988752 21 15666776 334444443
No 474
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=95.06 E-value=0.12 Score=60.00 Aligned_cols=106 Identities=6% Similarity=-0.123 Sum_probs=63.1
Q ss_pred CCCCeEEEEECCCCCEEEEeeC-----CCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCC-
Q 004989 606 SSNLVCSLSFDRDGELFAAAGV-----NKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFE- 678 (720)
Q Consensus 606 ~~~~V~sv~f~~dg~~lat~~~-----d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~w~~~~~~~laS~s~D- 678 (720)
|...+.+++|+|||++|+.++. +..|.+||+.+..... ....+...+ .+...+.. .|+|+++.++.++..+
T Consensus 231 ~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~-~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~ 308 (710)
T 2xdw_A 231 EPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGI-TGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHS 308 (710)
T ss_dssp CTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSS-CSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTC
T ss_pred CCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECccccccc-CCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCC
Confidence 4567889999999999887765 6789999986510000 000012222 22333444 5888666444455433
Q ss_pred --CcEEEEECCCCc-----EEE------EEEEEeecCCceEEEecCcc
Q 004989 679 --GVVQVGQVLHLI-----YFS------ALYCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 679 --~~v~lWD~~tg~-----~~~------~v~~v~~~~~~~~~~~~~~~ 713 (720)
+.|.+||+.+++ .+. .+.+++|++...++.+.+-|
T Consensus 309 ~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~ 356 (710)
T 2xdw_A 309 PNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHD 356 (710)
T ss_dssp TTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEET
T ss_pred CCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEEC
Confidence 369999998873 222 16677887655555554433
No 475
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=94.91 E-value=0.29 Score=49.90 Aligned_cols=93 Identities=11% Similarity=-0.085 Sum_probs=67.3
Q ss_pred CCCeEEEEECCC-CCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEE
Q 004989 607 SNLVCSLSFDRD-GELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQ 685 (720)
Q Consensus 607 ~~~V~sv~f~~d-g~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD 685 (720)
...-.+..|+|+ +.++.+...+++|..||..+.. +........+.+++|+|++. ++++. +..|.+||
T Consensus 12 ~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~---------~~~~~~~~~~~~i~~~~dG~-l~v~~--~~~l~~~d 79 (297)
T 3g4e_A 12 CRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQ---------VQRVTMDAPVSSVALRQSGG-YVATI--GTKFCALN 79 (297)
T ss_dssp CSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCC---------EEEEECSSCEEEEEEBTTSS-EEEEE--TTEEEEEE
T ss_pred CccccCCeEECCCCEEEEEECCCCEEEEEECCCCc---------EEEEeCCCceEEEEECCCCC-EEEEE--CCeEEEEE
Confidence 345678999995 5578888889999999987652 11222345799999999655 66554 56899999
Q ss_pred CCCCcEEE-----------EEEEEeecCCceEEEecC
Q 004989 686 VLHLIYFS-----------ALYCIVLNKLLIIFRYGM 711 (720)
Q Consensus 686 ~~tg~~~~-----------~v~~v~~~~~~~~~~~~~ 711 (720)
..+|+... .++.+++.+.+.++...+
T Consensus 80 ~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~ 116 (297)
T 3g4e_A 80 WKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTM 116 (297)
T ss_dssp TTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEE
T ss_pred CCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecC
Confidence 99886432 157788999888777654
No 476
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=94.62 E-value=0.27 Score=50.06 Aligned_cols=92 Identities=8% Similarity=0.044 Sum_probs=63.1
Q ss_pred cceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeC--CCcEEEeeCCcccccccccccceEE--ecCCCCEEEEEEe
Q 004989 590 SKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGV--NKKIKVFECDAIINENRDIHYPVVE--MASRSKLSSICWN 665 (720)
Q Consensus 590 ~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~--d~~i~iwd~~~~~~~~~~~~~~~~~--~~~~~~i~~l~w~ 665 (720)
.+.++++++.|+ .......++|++||.++++.|. +.+|.++|..++. .+.. +..+.---.+++.
T Consensus 7 ~~~~vv~~~p~~----~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~--------v~~~i~l~~~~fgeGi~~~ 74 (266)
T 2iwa_A 7 YIVEVLNEFPHD----PYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGK--------VENIHKMDDSYFGEGLTLL 74 (266)
T ss_dssp EEEEEEEEEECC----TTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCC--------EEEEEECCTTCCEEEEEEE
T ss_pred cCceEEEEEECC----CCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCC--------EEEEEecCCCcceEEEEEe
Confidence 357899999873 1245789999999988887775 6899999998762 1111 1112223356665
Q ss_pred cCCCCEEEEEeCCCcEEEEECCCCcEEEEE
Q 004989 666 SYIKSQIASSNFEGVVQVGQVLHLIYFSAL 695 (720)
Q Consensus 666 ~~~~~~laS~s~D~~v~lWD~~tg~~~~~v 695 (720)
. +.+.++.-.+++|-++|..|++.+.++
T Consensus 75 g--~~lyv~t~~~~~v~viD~~t~~v~~~i 102 (266)
T 2iwa_A 75 N--EKLYQVVWLKNIGFIYDRRTLSNIKNF 102 (266)
T ss_dssp T--TEEEEEETTCSEEEEEETTTTEEEEEE
T ss_pred C--CEEEEEEecCCEEEEEECCCCcEEEEE
Confidence 3 334445556899999999999988875
No 477
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=94.57 E-value=0.22 Score=51.81 Aligned_cols=92 Identities=11% Similarity=-0.085 Sum_probs=64.6
Q ss_pred CCeEEEEECCCC-CEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEEC
Q 004989 608 NLVCSLSFDRDG-ELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQV 686 (720)
Q Consensus 608 ~~V~sv~f~~dg-~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~ 686 (720)
....+.+|+|++ .++.++..++.|.+||..+.. +........+.+++|+|++ .+++++ .++ |.+||.
T Consensus 49 ~~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~---------~~~~~~~~~v~~i~~~~dg-~l~v~~-~~g-l~~~d~ 116 (326)
T 2ghs_A 49 LLGEGPTFDPASGTAWWFNILERELHELHLASGR---------KTVHALPFMGSALAKISDS-KQLIAS-DDG-LFLRDT 116 (326)
T ss_dssp SBEEEEEEETTTTEEEEEEGGGTEEEEEETTTTE---------EEEEECSSCEEEEEEEETT-EEEEEE-TTE-EEEEET
T ss_pred CCCcCCeEeCCCCEEEEEECCCCEEEEEECCCCc---------EEEEECCCcceEEEEeCCC-eEEEEE-CCC-EEEEEC
Confidence 346788999985 567787788999999987641 1112223569999999965 466654 344 999999
Q ss_pred CCCcEEE-----------EEEEEeecCCceEEEecC
Q 004989 687 LHLIYFS-----------ALYCIVLNKLLIIFRYGM 711 (720)
Q Consensus 687 ~tg~~~~-----------~v~~v~~~~~~~~~~~~~ 711 (720)
.+|+... .++++++++.+.++..++
T Consensus 117 ~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~ 152 (326)
T 2ghs_A 117 ATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTM 152 (326)
T ss_dssp TTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEE
T ss_pred CCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeC
Confidence 8887432 267888988887766543
No 478
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=94.45 E-value=0.3 Score=49.99 Aligned_cols=92 Identities=5% Similarity=-0.071 Sum_probs=66.1
Q ss_pred CCCeEEEEECCCCC-EEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEE
Q 004989 607 SNLVCSLSFDRDGE-LFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQ 685 (720)
Q Consensus 607 ~~~V~sv~f~~dg~-~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD 685 (720)
..+..+.+|+|||+ ++.++..++.|..||..... .........+.+++|+|++ +++++...++.|.+||
T Consensus 44 ~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~g~~---------~~~~~~~~~~~gl~~d~dG-~l~v~~~~~~~v~~~~ 113 (305)
T 3dr2_A 44 ATWSEGPAWWEAQRTLVWSDLVGRRVLGWREDGTV---------DVLLDATAFTNGNAVDAQQ-RLVHCEHGRRAITRSD 113 (305)
T ss_dssp CSSEEEEEEEGGGTEEEEEETTTTEEEEEETTSCE---------EEEEESCSCEEEEEECTTS-CEEEEETTTTEEEEEC
T ss_pred CcCccCCeEeCCCCEEEEEECCCCEEEEEeCCCCE---------EEEeCCCCccceeeECCCC-CEEEEECCCCEEEEEC
Confidence 56788999999998 67888889999999863211 1111234568999999965 4666655668899999
Q ss_pred CCCCcEEEE-----------EEEEeecCCceEEEe
Q 004989 686 VLHLIYFSA-----------LYCIVLNKLLIIFRY 709 (720)
Q Consensus 686 ~~tg~~~~~-----------v~~v~~~~~~~~~~~ 709 (720)
.. |+...- ++.+++.+.+.++.+
T Consensus 114 ~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~t 147 (305)
T 3dr2_A 114 AD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFT 147 (305)
T ss_dssp TT-SCEEEEECEETTEECSCCCCEEECTTSCEEEE
T ss_pred CC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEe
Confidence 86 653221 346889999988885
No 479
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=94.39 E-value=0.48 Score=49.17 Aligned_cols=93 Identities=10% Similarity=0.006 Sum_probs=61.4
Q ss_pred CCeEEEEECCCCCEE-EEeeCCCcEEEeeCC--cccccccccccceEEecC-CCCEEEEEEecCCCCEEEEEeCCCcEEE
Q 004989 608 NLVCSLSFDRDGELF-AAAGVNKKIKVFECD--AIINENRDIHYPVVEMAS-RSKLSSICWNSYIKSQIASSNFEGVVQV 683 (720)
Q Consensus 608 ~~V~sv~f~~dg~~l-at~~~d~~i~iwd~~--~~~~~~~~~~~~~~~~~~-~~~i~~l~w~~~~~~~laS~s~D~~v~l 683 (720)
...+.++|+|||+.+ ++.+.++.|.+||+. ++.. ... ...+..+.. ......+++.+++ ++.++...++.|.+
T Consensus 179 ~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~-~~~-~~~~~~~~~~~~~p~gi~~d~~G-~lwva~~~~~~v~~ 255 (326)
T 2ghs_A 179 SIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLP-TGK-AEVFIDSTGIKGGMDGSVCDAEG-HIWNARWGEGAVDR 255 (326)
T ss_dssp SSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCB-SSC-CEEEEECTTSSSEEEEEEECTTS-CEEEEEETTTEEEE
T ss_pred cccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCc-ccC-ceEEEECCCCCCCCCeeEECCCC-CEEEEEeCCCEEEE
Confidence 457899999999864 555667999999985 3200 000 001112221 3446789999865 56666655788999
Q ss_pred EECCCCcEEEE-------EEEEeec-CCc
Q 004989 684 GQVLHLIYFSA-------LYCIVLN-KLL 704 (720)
Q Consensus 684 WD~~tg~~~~~-------v~~v~~~-~~~ 704 (720)
||. +|+.+.. +++++|+ +.+
T Consensus 256 ~d~-~g~~~~~i~~~~~~~~~~af~g~d~ 283 (326)
T 2ghs_A 256 YDT-DGNHIARYEVPGKQTTCPAFIGPDA 283 (326)
T ss_dssp ECT-TCCEEEEEECSCSBEEEEEEESTTS
T ss_pred ECC-CCCEEEEEECCCCCcEEEEEecCCC
Confidence 999 6776654 7899997 654
No 480
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=94.13 E-value=0.66 Score=46.93 Aligned_cols=91 Identities=9% Similarity=0.148 Sum_probs=58.7
Q ss_pred cceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCC--cEEEeeCCcccccccccccceEEecCCCCE--EEEEEe
Q 004989 590 SKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNK--KIKVFECDAIINENRDIHYPVVEMASRSKL--SSICWN 665 (720)
Q Consensus 590 ~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i--~~l~w~ 665 (720)
...+++++..| +.......+.|+ |+.++.++|.++ +|+++|+.++. .+....-.... -.+...
T Consensus 29 ~~~~vv~~~ph----d~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgk--------v~~~~~l~~~~FgeGit~~ 95 (262)
T 3nol_A 29 YDYQIVHSYPH----DTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGK--------TLQQIELGKRYFGEGISDW 95 (262)
T ss_dssp EEEEEEEEEEC----CTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCC--------EEEEEECCTTCCEEEEEEE
T ss_pred cceEEEEEecC----CCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCc--------EEEEEecCCccceeEEEEe
Confidence 35688888876 235667899999 788889989877 99999998862 11111111112 223333
Q ss_pred cCCCCEEEEEeCCCcEEEEECCCCcEEEEE
Q 004989 666 SYIKSQIASSNFEGVVQVGQVLHLIYFSAL 695 (720)
Q Consensus 666 ~~~~~~laS~s~D~~v~lWD~~tg~~~~~v 695 (720)
+..+....-.++++-++|..|++.+.++
T Consensus 96 --g~~ly~ltw~~~~v~v~D~~t~~~~~ti 123 (262)
T 3nol_A 96 --KDKIVGLTWKNGLGFVWNIRNLRQVRSF 123 (262)
T ss_dssp --TTEEEEEESSSSEEEEEETTTCCEEEEE
T ss_pred --CCEEEEEEeeCCEEEEEECccCcEEEEE
Confidence 2223333335788888888888888774
No 481
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=94.10 E-value=0.14 Score=55.85 Aligned_cols=92 Identities=17% Similarity=0.121 Sum_probs=64.0
Q ss_pred cccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEee----------CCCcEEEeeCCcccccccccccceEEecC--
Q 004989 588 SFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAG----------VNKKIKVFECDAIINENRDIHYPVVEMAS-- 655 (720)
Q Consensus 588 ~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~----------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-- 655 (720)
.-.++++++++.-|. .. .++|+|||+++..+. .++.|.++|..+.. .+..+.-
T Consensus 105 D~~t~~vv~~I~vG~-----~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~--------vv~~I~v~g 169 (426)
T 3c75_H 105 DGSTGRILGMTDGGF-----LP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFL--------PIADIELPD 169 (426)
T ss_dssp ETTTTEEEEEEEECS-----SC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCC--------EEEEEEETT
T ss_pred ECCCCEEEEEEECCC-----CC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCc--------EEEEEECCC
Confidence 346788999998542 23 799999999765554 47899999988761 2222210
Q ss_pred ------CCCEEEEEEecCCCCEEEEEeC--CCcEEEEECCCCcEEEEE
Q 004989 656 ------RSKLSSICWNSYIKSQIASSNF--EGVVQVGQVLHLIYFSAL 695 (720)
Q Consensus 656 ------~~~i~~l~w~~~~~~~laS~s~--D~~v~lWD~~tg~~~~~v 695 (720)
...-..+.++|+++ +|..+.. +++|.+.|+.+++.+.+|
T Consensus 170 ~~r~~~g~~P~~~~~spDGk-~lyV~n~~~~~~VsVID~~t~kvv~~I 216 (426)
T 3c75_H 170 APRFLVGTYQWMNALTPDNK-NLLFYQFSPAPAVGVVDLEGKTFDRML 216 (426)
T ss_dssp CCCCCBSCCGGGSEECTTSS-EEEEEECSSSCEEEEEETTTTEEEEEE
T ss_pred ccccccCCCcceEEEcCCCC-EEEEEecCCCCeEEEEECCCCeEEEEE
Confidence 11234678999765 5655553 689999999999998874
No 482
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=94.09 E-value=0.055 Score=56.46 Aligned_cols=29 Identities=3% Similarity=0.102 Sum_probs=26.9
Q ss_pred CCceeccCCCCcEEEccCCceEEeecCcc
Q 004989 140 QGIVVHNVRPSCFVMSSFNHVSFIESASC 168 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a 168 (720)
.+++|+|++|.|||++.++.+.++||+.+
T Consensus 222 ~~l~HgD~~~~Nil~~~~~~~~lIDfe~a 250 (346)
T 2q83_A 222 PNLCHQDYGTGNTLLGENEQIWVIDLDTV 250 (346)
T ss_dssp CCEECSSCSTTSEEECGGGCEEECCCTTC
T ss_pred CceecCCCCcccEEEeCCCcEEEEehhhc
Confidence 68999999999999988889999999987
No 483
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=94.04 E-value=0.99 Score=44.96 Aligned_cols=95 Identities=12% Similarity=-0.026 Sum_probs=68.5
Q ss_pred CCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCEEEEEEecCCCCEEEEEeCCCcEEEEE
Q 004989 607 SNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEGVVQVGQ 685 (720)
Q Consensus 607 ~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD 685 (720)
...+.+|+++++|.++++...++.|.+||.. .... ...+. ....+.++++.+++ ++.++...++.|.+||
T Consensus 19 ~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~-------~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~v~~~d 89 (300)
T 2qc5_A 19 DSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIK-------EFEVPTPDAKVMCLIVSSLG-DIWFTENGANKIGKLS 89 (300)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEE-------EEECSSTTCCEEEEEECTTS-CEEEEETTTTEEEEEC
T ss_pred CCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceE-------EEECCCCCCcceeEEECCCC-CEEEEecCCCeEEEEC
Confidence 4678999999999998888789999999976 3100 00111 23568999999854 5666666678999999
Q ss_pred CCCCcEEEE--------EEEEeecCCceEEEecC
Q 004989 686 VLHLIYFSA--------LYCIVLNKLLIIFRYGM 711 (720)
Q Consensus 686 ~~tg~~~~~--------v~~v~~~~~~~~~~~~~ 711 (720)
.. |+...- +.++++.+.+.++..+.
T Consensus 90 ~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~ 122 (300)
T 2qc5_A 90 KK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQL 122 (300)
T ss_dssp TT-SCEEEEECSSTTCCEEEEEECSTTCEEEEET
T ss_pred CC-CCeEEecCCCCCCCCccceECCCCCEEEEcc
Confidence 88 654321 67888888877777654
No 484
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=94.01 E-value=0.23 Score=51.98 Aligned_cols=101 Identities=7% Similarity=0.016 Sum_probs=62.7
Q ss_pred CeEEEEECCCCCEEEEeeCCCcEEEeeCCcc--cccc---cccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEE
Q 004989 609 LVCSLSFDRDGELFAAAGVNKKIKVFECDAI--INEN---RDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQV 683 (720)
Q Consensus 609 ~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~--~~~~---~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~v~l 683 (720)
.++.|+|+|||++|..+..++. +||.+.+. .... ......+....+......++++++ ++++++...++.|.+
T Consensus 196 ~~~gia~s~dg~~ly~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~-G~l~va~~~~~~V~~ 273 (343)
T 2qe8_A 196 GVNGIVLDAENEWLYLSPMHST-SMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKD-HNIYVGDLAHSAIGV 273 (343)
T ss_dssp CEEEEEECTTSCEEEEEESSCS-EEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTT-CCEEEEEGGGTEEEE
T ss_pred ccceeEeccCCCEEEEEeCCCC-eEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCC-CCEEEEccCCCeEEE
Confidence 4789999999998777766653 44544321 1000 000011122222334567899996 568888878899999
Q ss_pred EECCCCcEEEE--------EEEEeecCCceEEEecC
Q 004989 684 GQVLHLIYFSA--------LYCIVLNKLLIIFRYGM 711 (720)
Q Consensus 684 WD~~tg~~~~~--------v~~v~~~~~~~~~~~~~ 711 (720)
||..+|+.... ..+|+|.+.+.+++..+
T Consensus 274 ~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~ 309 (343)
T 2qe8_A 274 ITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDCN 309 (343)
T ss_dssp EETTTTEEEEEEECGGGSCEEEEEECTTSCEEEEEC
T ss_pred EECCCCCEEEEEECCceecCCeeEECCCCcEEEEeC
Confidence 99967753221 56889988777666544
No 485
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=93.62 E-value=0.093 Score=57.33 Aligned_cols=84 Identities=5% Similarity=0.022 Sum_probs=58.1
Q ss_pred EEEECCCCCE-EEEee---------CCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEe-CCCc
Q 004989 612 SLSFDRDGEL-FAAAG---------VNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSN-FEGV 680 (720)
Q Consensus 612 sv~f~~dg~~-lat~~---------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s-~D~~ 680 (720)
.++|+|||.. +++.+ .+++|-|+|..+. ..+..+.-...-..+.|+|+++.+|+++. .+++
T Consensus 323 ~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~--------kvv~~I~vg~~P~gia~spDg~~~lyv~n~~s~~ 394 (426)
T 3c75_H 323 QTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETG--------ERINKIELGHEIDSINVSQDAEPLLYALSAGTQT 394 (426)
T ss_dssp CEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTC--------CEEEEEEEEEEECEEEECCSSSCEEEEEETTTTE
T ss_pred eeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCC--------eEEEEEECCCCcCeEEEccCCCEEEEEEcCCCCe
Confidence 3689999875 44432 2468999998876 12223322224789999997664788887 4999
Q ss_pred EEEEECCCCcEEEEEEEEeecCC
Q 004989 681 VQVGQVLHLIYFSALYCIVLNKL 703 (720)
Q Consensus 681 v~lWD~~tg~~~~~v~~v~~~~~ 703 (720)
|.|+|+.|++.+.+|--+.-.|.
T Consensus 395 VsVID~~t~kvv~tI~~vG~~P~ 417 (426)
T 3c75_H 395 LHIYDAATGEELRSVDQLGRGPQ 417 (426)
T ss_dssp EEEEETTTCCEEEEECCCSSSCC
T ss_pred EEEEECCCCCEEEEecCCCCCCc
Confidence 99999999999988633333333
No 486
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=93.21 E-value=0.18 Score=59.27 Aligned_cols=92 Identities=11% Similarity=-0.067 Sum_probs=59.6
Q ss_pred CeEEEEEC-CCCCEEEEeeC-----CCcEEEeeCCcc-cccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCC---
Q 004989 609 LVCSLSFD-RDGELFAAAGV-----NKKIKVFECDAI-INENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFE--- 678 (720)
Q Consensus 609 ~V~sv~f~-~dg~~lat~~~-----d~~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D--- 678 (720)
.+.+.+|| |||++||-+.. ..+|+|+|+.++ .. .. ..+.. ....++|+|+++ .|+-.++|
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~-l~---~~~~~-----~~~~~~WspDg~-~l~y~~~d~~~ 244 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQT-IA---DKVSG-----TNGEIVWGPDHT-SLFYVTKDETL 244 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCC-CC---CCEEE-----ECSCCEECSSTT-EEEEEEECTTC
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEe-CC---ccccC-----ceeeEEEecCCC-EEEEEEECCCC
Confidence 57889999 99998884332 246999998876 31 01 11111 135789999765 55544555
Q ss_pred --CcEEEEECCCCc----EEEE------EEEEeecCCceEEEec
Q 004989 679 --GVVQVGQVLHLI----YFSA------LYCIVLNKLLIIFRYG 710 (720)
Q Consensus 679 --~~v~lWD~~tg~----~~~~------v~~v~~~~~~~~~~~~ 710 (720)
..|.+|++.+++ .+.+ ..++.|++.+..+...
T Consensus 245 ~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~ 288 (751)
T 2xe4_A 245 RENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIG 288 (751)
T ss_dssp CEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEE
T ss_pred CCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEE
Confidence 258888998874 3322 4577899998766543
No 487
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=92.79 E-value=2 Score=42.61 Aligned_cols=95 Identities=9% Similarity=-0.130 Sum_probs=68.2
Q ss_pred CCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCEEEEEEecCCCCEEEEEeCCCcEEEEE
Q 004989 607 SNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEGVVQVGQ 685 (720)
Q Consensus 607 ~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD 685 (720)
...+.+|+++++|.++++...++.|.+||.. +... ...+. ....+.++++.+++ .+.++...++.|..||
T Consensus 61 ~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~-------~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~~ 131 (300)
T 2qc5_A 61 DAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFT-------EYPLPQPDSGPYGITEGLNG-DIWFTQLNGDRIGKLT 131 (300)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEE-------EEECSSTTCCEEEEEECSTT-CEEEEETTTTEEEEEC
T ss_pred CCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeE-------EecCCCCCCCCccceECCCC-CEEEEccCCCeEEEEC
Confidence 4678999999999998887778999999976 3100 11111 23568999999854 5666666688999999
Q ss_pred CCCCcEEEE--------EEEEeecCCceEEEecC
Q 004989 686 VLHLIYFSA--------LYCIVLNKLLIIFRYGM 711 (720)
Q Consensus 686 ~~tg~~~~~--------v~~v~~~~~~~~~~~~~ 711 (720)
.. |+.... .+++++.+.+.++..+.
T Consensus 132 ~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~ 164 (300)
T 2qc5_A 132 AD-GTIYEYDLPNKGSYPAFITLGSDNALWFTEN 164 (300)
T ss_dssp TT-SCEEEEECSSTTCCEEEEEECTTSSEEEEET
T ss_pred CC-CCEEEccCCCCCCCceeEEECCCCCEEEEec
Confidence 87 665432 67888888777776654
No 488
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=92.71 E-value=0.14 Score=59.79 Aligned_cols=55 Identities=16% Similarity=0.045 Sum_probs=42.8
Q ss_pred CEEEEEEecCCCCEEEEEeCC-C----cEEEEECCCCcEEEE----E--EEEeecCCceEEEecCccc
Q 004989 658 KLSSICWNSYIKSQIASSNFE-G----VVQVGQVLHLIYFSA----L--YCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 658 ~i~~l~w~~~~~~~laS~s~D-~----~v~lWD~~tg~~~~~----v--~~v~~~~~~~~~~~~~~~~ 714 (720)
.+..++|||+++ +||.++.+ | +|++||+.+|+.+.. + .+++|+|. ..+.+++.++
T Consensus 164 ~~~~~~~SPDG~-~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~~~~~~~~~wspD-~~l~~~~~~~ 229 (741)
T 1yr2_A 164 ALDAWAASDDGR-LLAYSVQDGGSDWRTVKFVGVADGKPLADELKWVKFSGLAWLGN-DALLYSRFAE 229 (741)
T ss_dssp EEEEEEECTTSS-EEEEEEEETTCSEEEEEEEETTTCCEEEEEEEEEESCCCEESTT-SEEEEEECCC
T ss_pred EEEeEEECCCCC-EEEEEEcCCCCceEEEEEEECCCCCCCCccCCCceeccEEEECC-CEEEEEEecC
Confidence 588999999764 66655533 3 699999999988764 2 57899999 8888888765
No 489
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=92.66 E-value=0.49 Score=51.13 Aligned_cols=94 Identities=5% Similarity=-0.086 Sum_probs=62.4
Q ss_pred EEECCCCCEEEEeeCCC--cEEEeeCCcccccccccccceEEe-c-CCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCC
Q 004989 613 LSFDRDGELFAAAGVNK--KIKVFECDAIINENRDIHYPVVEM-A-SRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLH 688 (720)
Q Consensus 613 v~f~~dg~~lat~~~d~--~i~iwd~~~~~~~~~~~~~~~~~~-~-~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~~t 688 (720)
++|+|+|++|..+..++ +|.+||...... .. .+... . ......+++++|.++.++ .++.++.|..||..+
T Consensus 176 ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~-~~----~~g~~~~~~~~~p~~iav~p~~g~ly-v~d~~~~I~~~d~~~ 249 (409)
T 3hrp_A 176 PAVTKDKQRVYSIGWEGTHTVYVYMKASGWA-PT----RIGQLGSTFSGKIGAVALDETEEWLY-FVDSNKNFGRFNVKT 249 (409)
T ss_dssp CEECTTSSEEEEEBSSTTCEEEEEEGGGTTC-EE----EEEECCTTSCSCCCBCEECTTSSEEE-EECTTCEEEEEETTT
T ss_pred eeEecCCCcEEEEecCCCceEEEEEcCCCce-eE----EeeeccchhcCCcEEEEEeCCCCeEE-EEECCCcEEEEECCC
Confidence 99999999888877766 788888654310 00 00011 1 234578899999655444 477789999999988
Q ss_pred CcEEEEE-------------E-EEeecC-CceEEEecCcc
Q 004989 689 LIYFSAL-------------Y-CIVLNK-LLIIFRYGMFQ 713 (720)
Q Consensus 689 g~~~~~v-------------~-~v~~~~-~~~~~~~~~~~ 713 (720)
+.... + + .++|++ .+.++..++..
T Consensus 250 ~~~~~-~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~ 288 (409)
T 3hrp_A 250 QEVTL-IKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNL 288 (409)
T ss_dssp CCEEE-EEECCCCSCCCCSSCCEEEEETTTTEEEEEETTT
T ss_pred CCEEE-EecccccCCCCCCccccEEEeCCCCEEEEEeCCC
Confidence 76322 2 2 788888 57777766543
No 490
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=92.52 E-value=2.2 Score=42.60 Aligned_cols=90 Identities=12% Similarity=0.070 Sum_probs=55.5
Q ss_pred ceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCC--cEEEeeCCcccccccccccceEEecCCCCE--EEEEEec
Q 004989 591 KLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNK--KIKVFECDAIINENRDIHYPVVEMASRSKL--SSICWNS 666 (720)
Q Consensus 591 ~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i--~~l~w~~ 666 (720)
..+++++..| .....+..++|++ +.++.|.|.++ +|+++|+.++. .+....-.... -.+...
T Consensus 8 ~~~v~~~~ph----d~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgk--------v~~~~~l~~~~fgeGi~~~- 73 (243)
T 3mbr_X 8 GYRVVKRYPH----DTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGR--------ILQRAEVPPPYFGAGIVAW- 73 (243)
T ss_dssp CEEEEEEEEC----CTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCC--------EEEEEECCTTCCEEEEEEE-
T ss_pred ceEEEEEcCC----CCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCC--------EEEEEeCCCCcceeEEEEe-
Confidence 4578888876 3356788999997 78888888864 99999998762 11111111111 122332
Q ss_pred CCCCEEEEEeCCCcEEEEECCCCcEEEEE
Q 004989 667 YIKSQIASSNFEGVVQVGQVLHLIYFSAL 695 (720)
Q Consensus 667 ~~~~~laS~s~D~~v~lWD~~tg~~~~~v 695 (720)
+..+....-.++++-++|..|.+.+.++
T Consensus 74 -~~~ly~ltw~~~~v~v~D~~tl~~~~ti 101 (243)
T 3mbr_X 74 -RDRLIQLTWRNHEGFVYDLATLTPRARF 101 (243)
T ss_dssp -TTEEEEEESSSSEEEEEETTTTEEEEEE
T ss_pred -CCEEEEEEeeCCEEEEEECCcCcEEEEE
Confidence 2223333345777888888887777764
No 491
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=92.45 E-value=1.7 Score=44.10 Aligned_cols=90 Identities=9% Similarity=0.083 Sum_probs=57.9
Q ss_pred ceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEE-ecCCCCEEEEEEecCCC
Q 004989 591 KLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVE-MASRSKLSSICWNSYIK 669 (720)
Q Consensus 591 ~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~i~~l~w~~~~~ 669 (720)
..+++++..| +.......+.|+ ++.++.+.|.++.|+++|+.++.- +.. +...----.+.... .
T Consensus 42 ~~~Vv~~~ph----d~~~ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv--------~~~~l~~~~FgeGit~~g--~ 106 (268)
T 3nok_A 42 VAHIIREYPH----ATNAFTQGLVFH-QGHFFESTGHQGTLRQLSLESAQP--------VWMERLGNIFAEGLASDG--E 106 (268)
T ss_dssp EEEEEEEEEC----CTTCCEEEEEEE-TTEEEEEETTTTEEEECCSSCSSC--------SEEEECTTCCEEEEEECS--S
T ss_pred ceEEEEEEcC----CCccccceEEEE-CCEEEEEcCCCCEEEEEECCCCcE--------EeEECCCCcceeEEEEeC--C
Confidence 3467777765 235667889998 578889999999999999988621 111 21111112344432 3
Q ss_pred CEEEEEeCCCcEEEEECCCCcEEEEE
Q 004989 670 SQIASSNFEGVVQVGQVLHLIYFSAL 695 (720)
Q Consensus 670 ~~laS~s~D~~v~lWD~~tg~~~~~v 695 (720)
.+....-.+++|.++|..|++.+.+|
T Consensus 107 ~Ly~ltw~~~~v~V~D~~Tl~~~~ti 132 (268)
T 3nok_A 107 RLYQLTWTEGLLFTWSGMPPQRERTT 132 (268)
T ss_dssp CEEEEESSSCEEEEEETTTTEEEEEE
T ss_pred EEEEEEccCCEEEEEECCcCcEEEEE
Confidence 34444446788888888888888774
No 492
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=92.38 E-value=0.2 Score=58.16 Aligned_cols=58 Identities=5% Similarity=-0.106 Sum_probs=39.0
Q ss_pred CcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEEE
Q 004989 629 KKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSAL 695 (720)
Q Consensus 629 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~v 695 (720)
+.|..||..++. .+....+...+....+...+ .+++.++.||.|++||+.||+.+.++
T Consensus 457 g~l~A~D~~tG~--------~~W~~~~~~~~~~g~~~~~g-~~v~~g~~dg~l~a~D~~tG~~lw~~ 514 (677)
T 1kb0_A 457 GRLLAWDPVAQK--------AAWSVEHVSPWNGGTLTTAG-NVVFQGTADGRLVAYHAATGEKLWEA 514 (677)
T ss_dssp EEEEEEETTTTE--------EEEEEEESSSCCCCEEEETT-TEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred cEEEEEeCCCCc--------EEeecCCCCCCcCcceEeCC-CEEEEECCCCcEEEEECCCCceeeee
Confidence 789999987761 22222222223333444433 47788899999999999999999874
No 493
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=92.32 E-value=0.089 Score=56.11 Aligned_cols=67 Identities=3% Similarity=-0.086 Sum_probs=40.8
Q ss_pred CCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE
Q 004989 618 DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA 694 (720)
Q Consensus 618 dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~ 694 (720)
++.++++|+.|+.|..||..++. .+..... ..+.+..+.++ +.++++++.||.|..||..||+.+..
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~--------~~W~~~~-~~~~s~p~~~~-g~~~v~~s~dg~l~a~d~~tG~~~w~ 74 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGS--------IKWTLKE-DPVLQVPTHVE-EPAFLPDPNDGSLYTLGSKNNEGLTK 74 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCC--------EEEEEEC-CCSCCCC------CCEEECTTTCCEEEC-----CCSEE
T ss_pred eCCEEEEEcCCCEEEEEECCCCC--------EEEEecC-CCceecceEcC-CCEEEEeCCCCEEEEEECCCCceeee
Confidence 67889999999999999988762 2222222 33434444443 34677888999999999999987643
No 494
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=92.21 E-value=0.59 Score=47.75 Aligned_cols=92 Identities=8% Similarity=0.018 Sum_probs=58.4
Q ss_pred CCeEEEEECCCCCEEEE----eeC-------------CCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCC
Q 004989 608 NLVCSLSFDRDGELFAA----AGV-------------NKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKS 670 (720)
Q Consensus 608 ~~V~sv~f~~dg~~lat----~~~-------------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~ 670 (720)
+.+++++++|||.+++| |.. .+.|..||..++.. . .+. .-.....++|+|+++
T Consensus 131 ~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~-----~-~~~---~~~~p~gl~~spdg~- 200 (305)
T 3dr2_A 131 NSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPL-----Q-RMA---DLDHPNGLAFSPDEQ- 200 (305)
T ss_dssp SCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCC-----E-EEE---EESSEEEEEECTTSS-
T ss_pred CCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcE-----E-EEe---cCCCCcceEEcCCCC-
Confidence 45788999999999987 432 24677777644310 0 111 223467899999754
Q ss_pred EEEEEeCC------CcEEEEECCCCcEEEE--EE---------EEeecCCceEEEec
Q 004989 671 QIASSNFE------GVVQVGQVLHLIYFSA--LY---------CIVLNKLLIIFRYG 710 (720)
Q Consensus 671 ~laS~s~D------~~v~lWD~~tg~~~~~--v~---------~v~~~~~~~~~~~~ 710 (720)
.|+.++.+ +.|.+||+..+. +.. ++ .+.+.+.+.+.+.+
T Consensus 201 ~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~ 256 (305)
T 3dr2_A 201 TLYVSQTPEQGHGSVEITAFAWRDGA-LHDRRHFASVPDGLPDGFCVDRGGWLWSSS 256 (305)
T ss_dssp EEEEEECCC---CCCEEEEEEEETTE-EEEEEEEECCSSSCCCSEEECTTSCEEECC
T ss_pred EEEEEecCCcCCCCCEEEEEEecCCC-ccCCeEEEECCCCCCCeEEECCCCCEEEec
Confidence 55555554 789999998765 332 22 46667777666554
No 495
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=91.97 E-value=0.19 Score=53.78 Aligned_cols=85 Identities=11% Similarity=-0.015 Sum_probs=58.4
Q ss_pred cccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEee----------CCCcEEEeeCCcccccccccccceEEecCC-
Q 004989 588 SFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAG----------VNKKIKVFECDAIINENRDIHYPVVEMASR- 656 (720)
Q Consensus 588 ~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~----------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~- 656 (720)
.-.++++++++.-|. .. .++|+|||+++..+. .+++|.+||..+. .++.++.-.
T Consensus 52 D~~t~~v~~~i~vG~-----~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~--------~vv~~I~v~~ 116 (368)
T 1mda_H 52 CAGCGVTLGHSLGAF-----LS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTF--------LPIADIELPD 116 (368)
T ss_dssp ETTTTEEEEEEEECT-----TC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTC--------CEEEEEEETT
T ss_pred ECCCCeEEEEEeCCC-----CC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCC--------CEEEEEECCC
Confidence 446788999988531 23 699999999766654 4789999999886 233332110
Q ss_pred -------CCEEEEEEecCCCCEEEEEeC--CCcEEE--EECCC
Q 004989 657 -------SKLSSICWNSYIKSQIASSNF--EGVVQV--GQVLH 688 (720)
Q Consensus 657 -------~~i~~l~w~~~~~~~laS~s~--D~~v~l--WD~~t 688 (720)
..-..+.++|+++ +|+.+.+ +..|.| ||+.+
T Consensus 117 ~~~~~~g~~P~~ia~SpDGk-~lyVan~~~~~~v~V~~iD~~t 158 (368)
T 1mda_H 117 APRFSVGPRVHIIGNCASSA-CLLFFLFGSSAAAGLSVPGASD 158 (368)
T ss_dssp SCSCCBSCCTTSEEECTTSS-CEEEEECSSSCEEEEEETTTEE
T ss_pred ccccccCCCcceEEEcCCCC-EEEEEccCCCCeEEEEEEchhh
Confidence 1235789999766 5555554 467999 99987
No 496
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=91.67 E-value=0.4 Score=51.53 Aligned_cols=77 Identities=6% Similarity=0.029 Sum_probs=54.0
Q ss_pred EEEEECCCCCEE-EEee---------CCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEE-eCCC
Q 004989 611 CSLSFDRDGELF-AAAG---------VNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASS-NFEG 679 (720)
Q Consensus 611 ~sv~f~~dg~~l-at~~---------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~-s~D~ 679 (720)
..++++|++..+ ++-. -..+|-+.|..+.. -+..+.-...+..|.++|+++.+|.++ ..++
T Consensus 283 q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~k--------v~~~i~vg~~~~~lavs~D~~~~ly~tn~~~~ 354 (386)
T 3sjl_D 283 QQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGE--------RLAKFEMGHEIDSINVSQDEKPLLYALSTGDK 354 (386)
T ss_dssp SCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCC--------EEEEEEEEEEECEEEECSSSSCEEEEEETTTT
T ss_pred ceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCe--------EEEEEECCCCcceEEECCCCCeEEEEEcCCCC
Confidence 357789999753 3322 12578888987751 223322223578999999887666665 4599
Q ss_pred cEEEEECCCCcEEEEE
Q 004989 680 VVQVGQVLHLIYFSAL 695 (720)
Q Consensus 680 ~v~lWD~~tg~~~~~v 695 (720)
+|.|+|+.|++.+.++
T Consensus 355 ~VsViD~~t~k~~~~i 370 (386)
T 3sjl_D 355 TLYIHDAESGEELRSV 370 (386)
T ss_dssp EEEEEETTTCCEEEEE
T ss_pred eEEEEECCCCcEEEEe
Confidence 9999999999999885
No 497
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=91.36 E-value=5.4 Score=40.52 Aligned_cols=88 Identities=13% Similarity=0.085 Sum_probs=59.3
Q ss_pred ccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCC
Q 004989 589 FSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYI 668 (720)
Q Consensus 589 ~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~ 668 (720)
....++++++.. ......++|+++|.++++....++|..||..... ...........++++.+++
T Consensus 19 ~~~~~~~~~~p~------~~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~---------~~~~~~~~~p~gia~~~dG 83 (306)
T 2p4o_A 19 LAPAKIITSFPV------NTFLENLASAPDGTIFVTNHEVGEIVSITPDGNQ---------QIHATVEGKVSGLAFTSNG 83 (306)
T ss_dssp CCCEEEEEEECT------TCCEEEEEECTTSCEEEEETTTTEEEEECTTCCE---------EEEEECSSEEEEEEECTTS
T ss_pred CCCceEeEeCCC------CCCcceEEECCCCCEEEEeCCCCeEEEECCCCce---------EEEEeCCCCceeEEEcCCC
Confidence 355777787754 3568899999999998888788999999975431 1111223458899999975
Q ss_pred CCEEEEEe-CCC-cEEEEECCCCcEE
Q 004989 669 KSQIASSN-FEG-VVQVGQVLHLIYF 692 (720)
Q Consensus 669 ~~~laS~s-~D~-~v~lWD~~tg~~~ 692 (720)
. ++++.. .++ .|-.+|..+|+..
T Consensus 84 ~-l~vad~~~~~~~v~~~d~~~g~~~ 108 (306)
T 2p4o_A 84 D-LVATGWNADSIPVVSLVKSDGTVE 108 (306)
T ss_dssp C-EEEEEECTTSCEEEEEECTTSCEE
T ss_pred c-EEEEeccCCcceEEEEcCCCCeEE
Confidence 5 444332 333 3556687888743
No 498
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=91.31 E-value=0.25 Score=57.41 Aligned_cols=58 Identities=7% Similarity=-0.085 Sum_probs=38.3
Q ss_pred CCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE
Q 004989 628 NKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA 694 (720)
Q Consensus 628 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~v~lWD~~tg~~~~~ 694 (720)
+++|..||+.++. .+........+..-.+... +.+|..++.||.|++||..||+.+-+
T Consensus 454 ~g~l~A~D~~tG~--------~~W~~~~~~~~~~g~~~ta-gglvf~gt~dg~l~a~D~~tG~~lw~ 511 (689)
T 1yiq_A 454 SGKLIAWDPVKQQ--------AAWEVPYVTIFNGGTLSTA-GNLVFEGSADGRVIAYAADTGEKLWE 511 (689)
T ss_dssp EEEEEEEETTTTE--------EEEEEEESSSCCCCEEEET-TTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred ceeEEEEECCCCC--------eEeEccCCCCccCccceEC-CCEEEEECCCCcEEEEECCCCcccee
Confidence 4778889987762 1222222222222244443 45888999999999999999999866
No 499
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=90.89 E-value=0.14 Score=55.75 Aligned_cols=30 Identities=7% Similarity=0.210 Sum_probs=26.7
Q ss_pred HHCCceeccCCCCcEEEccCCceEEeecCcc
Q 004989 138 HSQGIVVHNVRPSCFVMSSFNHVSFIESASC 168 (720)
Q Consensus 138 Hs~gIvHrDLKP~NILl~~~~~vkliDfg~a 168 (720)
+...++|+|++|.|||++.++ +.++||+.+
T Consensus 230 ~~~~liHGDl~~~Nil~~~~~-~~lID~e~a 259 (420)
T 2pyw_A 230 RAQALIHGDLHTGSVMVTQDS-TQVIDPEFS 259 (420)
T ss_dssp BCCEEECSCCSGGGEEECSSC-EEECCCTTC
T ss_pred CCCeEEecCCCCCcEEEeCCC-CEEEeCccc
Confidence 457899999999999998776 999999887
No 500
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=89.69 E-value=0.54 Score=53.13 Aligned_cols=79 Identities=13% Similarity=0.032 Sum_probs=54.6
Q ss_pred CeEEEEECCCCCE-EEEeeCCCcEEEeeCCccc---ccccccccc-eEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEE
Q 004989 609 LVCSLSFDRDGEL-FAAAGVNKKIKVFECDAII---NENRDIHYP-VVEMASRSKLSSICWNSYIKSQIASSNFEGVVQV 683 (720)
Q Consensus 609 ~V~sv~f~~dg~~-lat~~~d~~i~iwd~~~~~---~~~~~~~~~-~~~~~~~~~i~~l~w~~~~~~~laS~s~D~~v~l 683 (720)
...+|.|+|||++ ++++..+.+|-|+|+++.. ....+.... +.+..-...-.-++|+|++ +...+.--|++|.+
T Consensus 278 ~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~dG-~aY~t~~ldsqV~k 356 (595)
T 1fwx_A 278 NPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFDGRG-NAYTSLFLDSQVVK 356 (595)
T ss_dssp SCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEECTTS-EEEEEETTTTEEEE
T ss_pred CceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcceEEECCCC-eEEEEEecCCcEEE
Confidence 4568999999996 6777789999999998641 111111112 2233333456789999976 44455567999999
Q ss_pred EECCC
Q 004989 684 GQVLH 688 (720)
Q Consensus 684 WD~~t 688 (720)
||+.+
T Consensus 357 wdi~~ 361 (595)
T 1fwx_A 357 WNIED 361 (595)
T ss_dssp EEHHH
T ss_pred EEhhH
Confidence 99987
Done!