BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004994
(720 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 158 bits (400), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 100/290 (34%), Positives = 151/290 (52%), Gaps = 6/290 (2%)
Query: 430 FTIASLQQYTNSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELA 489
F++ LQ +++FS N +G G G VYK L G L+AVK+L Q + +F
Sbjct: 28 FSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQ-GGELQFQTEV 86
Query: 490 STISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVAL 549
IS H N++ L G+C + LLVY Y N ++ L E+ W R R+AL
Sbjct: 87 EMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIAL 146
Query: 550 GAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLT 609
G+AR L YL + C+P I+H + K++NILLDE+ V D GLA L+ + +
Sbjct: 147 GSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM-DYKDXHVXXAVRG 205
Query: 610 AHGSGAPEF-ESGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQS--LVRWAIPRLH 666
G APE+ +G S ++DV+ GV++LEL+TG++ +D +R + L+ W L
Sbjct: 206 TIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLK 265
Query: 667 DIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDL 716
+ L +VD L G Y + + + + C Q P RP MSE+V+ L
Sbjct: 266 E-KKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 314
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 99/290 (34%), Positives = 151/290 (52%), Gaps = 6/290 (2%)
Query: 430 FTIASLQQYTNSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELA 489
F++ LQ +++F N +G G G VYK L G L+AVK+L +Q + +F
Sbjct: 20 FSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQ-GGELQFQTEV 78
Query: 490 STISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVAL 549
IS H N++ L G+C + LLVY Y N ++ L E+ W R R+AL
Sbjct: 79 EMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIAL 138
Query: 550 GAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLT 609
G+AR L YL + C+P I+H + K++NILLDE+ V D GLA L+ + +
Sbjct: 139 GSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM-DYKDXHVXXAVRG 197
Query: 610 AHGSGAPEF-ESGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQS--LVRWAIPRLH 666
G APE+ +G S ++DV+ GV++LEL+TG++ +D +R + L+ W L
Sbjct: 198 XIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLK 257
Query: 667 DIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDL 716
+ L +VD L G Y + + + + C Q P RP MSE+V+ L
Sbjct: 258 E-KKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 306
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 96/286 (33%), Positives = 144/286 (50%), Gaps = 7/286 (2%)
Query: 432 IASLQQYTNSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELAST 491
+ L++ TN+F IG G+ G VYK L G +A+K+ T Q EEF T
Sbjct: 31 LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKR--RTPESSQGIEEFETEIET 88
Query: 492 ISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGA 551
+S RH ++V LIG+C+E + +L+Y Y N L L+ + SW R+ + +GA
Sbjct: 89 LSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGA 148
Query: 552 ARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAH 611
AR L YL I+H + KS NILLDE + +++D G++ L +
Sbjct: 149 ARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTL 205
Query: 612 GSGAPE-FESGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDA 670
G PE F G + +SDVYS GVV+ E+L R +S PR +L WA+ H+
Sbjct: 206 GYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVES-HNNGQ 264
Query: 671 LSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDL 716
L ++VDP+L +SL +F D +C+ RP M +++ L
Sbjct: 265 LEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKL 310
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 96/286 (33%), Positives = 144/286 (50%), Gaps = 7/286 (2%)
Query: 432 IASLQQYTNSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELAST 491
+ L++ TN+F IG G+ G VYK L G +A+K+ T Q EEF T
Sbjct: 31 LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKR--RTPESSQGIEEFETEIET 88
Query: 492 ISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGA 551
+S RH ++V LIG+C+E + +L+Y Y N L L+ + SW R+ + +GA
Sbjct: 89 LSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGA 148
Query: 552 ARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAH 611
AR L YL I+H + KS NILLDE + +++D G++ L +
Sbjct: 149 ARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTL 205
Query: 612 GSGAPE-FESGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDA 670
G PE F G + +SDVYS GVV+ E+L R +S PR +L WA+ H+
Sbjct: 206 GYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVES-HNNGQ 264
Query: 671 LSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDL 716
L ++VDP+L +SL +F D +C+ RP M +++ L
Sbjct: 265 LEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKL 310
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 148/298 (49%), Gaps = 16/298 (5%)
Query: 430 FTIASLQQYTNSFSE------GNFIGEGLLGSVYKAELPGGKLLAVKKLSNTV--SQRQT 481
F+ L+ TN+F E GN +GEG G VYK + +AVKKL+ V + +
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 73
Query: 482 DEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSW 541
++F + +++ +H N+VEL+G+ ++ LVY Y N +L D L S + SW
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL-SCLDGTPPLSW 132
Query: 542 NIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTN 601
++R ++A GAA + +L E +H + KS+NILLDE ++SD GLA +
Sbjct: 133 HMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQT 189
Query: 602 ELSEGLLTAHGSGAPEFESGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWA 661
+ ++ APE G + +SD+YS GVV+LE++TG D R Q L+
Sbjct: 190 VMXSRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAVDEHRE--PQLLLDIK 247
Query: 662 IPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719
+ + +D ++ A + S+ + S+C+ + RP + ++ Q L M
Sbjct: 248 EEIEDEEKTIEDYIDKKMNDAD-STSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEM 304
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 148/298 (49%), Gaps = 16/298 (5%)
Query: 430 FTIASLQQYTNSFSE------GNFIGEGLLGSVYKAELPGGKLLAVKKLSNTV--SQRQT 481
F+ L+ TN+F E GN +GEG G VYK + +AVKKL+ V + +
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 73
Query: 482 DEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSW 541
++F + +++ +H N+VEL+G+ ++ LVY Y N +L D L S + SW
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL-SCLDGTPPLSW 132
Query: 542 NIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTN 601
++R ++A GAA + +L E +H + KS+NILLDE ++SD GLA +
Sbjct: 133 HMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQT 189
Query: 602 ELSEGLLTAHGSGAPEFESGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWA 661
+ ++ APE G + +SD+YS GVV+LE++TG D R Q L+
Sbjct: 190 VMXXRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAVDEHRE--PQLLLDIK 247
Query: 662 IPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719
+ + +D ++ A + S+ + S+C+ + RP + ++ Q L M
Sbjct: 248 EEIEDEEKTIEDYIDKKMNDAD-STSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEM 304
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 148/298 (49%), Gaps = 16/298 (5%)
Query: 430 FTIASLQQYTNSFSE------GNFIGEGLLGSVYKAELPGGKLLAVKKLSNTV--SQRQT 481
F+ L+ TN+F E GN +GEG G VYK + +AVKKL+ V + +
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 67
Query: 482 DEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSW 541
++F + +++ +H N+VEL+G+ ++ LVY Y N +L D L S + SW
Sbjct: 68 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL-SCLDGTPPLSW 126
Query: 542 NIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTN 601
++R ++A GAA + +L E +H + KS+NILLDE ++SD GLA +
Sbjct: 127 HMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQX 183
Query: 602 ELSEGLLTAHGSGAPEFESGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWA 661
+ ++ APE G + +SD+YS GVV+LE++TG D R Q L+
Sbjct: 184 VMXXRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAVDEHRE--PQLLLDIK 241
Query: 662 IPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719
+ + +D ++ A + S+ + S+C+ + RP + ++ Q L M
Sbjct: 242 EEIEDEEKTIEDYIDKKMNDAD-STSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEM 298
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 141/293 (48%), Gaps = 16/293 (5%)
Query: 430 FTIASLQQYTNSFSE------GNFIGEGLLGSVYKAELPGGKLLAVKKLSNTV--SQRQT 481
F+ L+ TN+F E GN GEG G VYK + +AVKKL+ V + +
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 64
Query: 482 DEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSW 541
++F + ++ +H N+VEL+G+ ++ LVY Y N +L D L S + SW
Sbjct: 65 KQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRL-SCLDGTPPLSW 123
Query: 542 NIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTN 601
+ R ++A GAA + +L E +H + KS+NILLDE ++SD GLA +
Sbjct: 124 HXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQX 180
Query: 602 ELSEGLLTAHGSGAPEFESGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWA 661
++ APE G + +SD+YS GVV+LE++TG D R Q L+
Sbjct: 181 VXXSRIVGTTAYXAPEALRGEITPKSDIYSFGVVLLEIITGLPAVDEHRE--PQLLLDIK 238
Query: 662 IPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQ 714
+ + +D + A + S+ + S+C+ + RP + ++ Q
Sbjct: 239 EEIEDEEKTIEDYIDKKXNDAD-STSVEAXYSVASQCLHEKKNKRPDIKKVQQ 290
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 131/279 (46%), Gaps = 32/279 (11%)
Query: 448 IGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYC 507
IG G G+V++AE G + AVK L + EFL + + RLRH NIV +G
Sbjct: 45 IGAGSFGTVHRAEWHGSDV-AVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 508 NEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIV 567
+ +V +Y +L+ LLH A ++ R+ +A A+ + YL PPIV
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHK-SGAREQLDERRRLSMAYDVAKGMNYLHNR-NPPIV 161
Query: 568 HGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFESGSY---- 623
H N KS N+L+D+K V+V D GL+ L + S L + +G PE+ +
Sbjct: 162 HRNLKSPNLLVDKKYTVKVCDFGLSRL-------KASTFLSSKSAAGTPEWMAPEVLRDE 214
Query: 624 --SCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDG 681
+ +SDVYS GV++ EL T ++P+ P + V + RL + R ++P +
Sbjct: 215 PSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLE----IPRNLNPQV-- 268
Query: 682 AYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI 720
A II C EP RP + I+ L +I
Sbjct: 269 ----------AAIIEGCWTNEPWKRPSFATIMDLLRPLI 297
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 131/279 (46%), Gaps = 32/279 (11%)
Query: 448 IGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYC 507
IG G G+V++AE G + AVK L + EFL + + RLRH NIV +G
Sbjct: 45 IGAGSFGTVHRAEWHGSDV-AVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 508 NEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIV 567
+ +V +Y +L+ LLH A ++ R+ +A A+ + YL PPIV
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHK-SGAREQLDERRRLSMAYDVAKGMNYLHNR-NPPIV 161
Query: 568 HGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFESGSY---- 623
H + KS N+L+D+K V+V D GL+ L + S L + +G PE+ +
Sbjct: 162 HRDLKSPNLLVDKKYTVKVCDFGLSRL-------KASXFLXSKXAAGTPEWMAPEVLRDE 214
Query: 624 --SCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDG 681
+ +SDVYS GV++ EL T ++P+ P + V + RL + R ++P +
Sbjct: 215 PSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLE----IPRNLNPQV-- 268
Query: 682 AYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI 720
A II C EP RP + I+ L +I
Sbjct: 269 ----------AAIIEGCWTNEPWKRPSFATIMDLLRPLI 297
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/206 (34%), Positives = 102/206 (49%), Gaps = 13/206 (6%)
Query: 445 GNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELI 504
G IG G G+VYK + G +AVK L+ T Q + F + + RH NI+ +
Sbjct: 17 GQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 74
Query: 505 GYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEP 564
GY + Q +V + +L+ LH+ E KF I +A AR + YL
Sbjct: 75 GYSTK-PQLAIVTQWCEGSSLYHHLHASE---TKFEMKKLIDIARQTARGMDYLHA---K 127
Query: 565 PIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEF----ES 620
I+H + KS+NI L E V++ D GLA + S + E L + APE +S
Sbjct: 128 SIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDS 187
Query: 621 GSYSCQSDVYSLGVVMLELLTGRKPY 646
YS QSDVY+ G+V+ EL+TG+ PY
Sbjct: 188 NPYSFQSDVYAFGIVLYELMTGQLPY 213
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/206 (34%), Positives = 101/206 (49%), Gaps = 13/206 (6%)
Query: 445 GNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELI 504
G IG G G+VYK + G +AVK L+ T Q + F + + RH NI+ +
Sbjct: 29 GQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 86
Query: 505 GYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEP 564
GY + Q +V + +L+ LH+ E KF I +A AR + YL
Sbjct: 87 GYSTK-PQLAIVTQWCEGSSLYHHLHASE---TKFEMKKLIDIARQTARGMDYLHA---K 139
Query: 565 PIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEF----ES 620
I+H + KS+NI L E V++ D GLA S + E L + APE +S
Sbjct: 140 SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDS 199
Query: 621 GSYSCQSDVYSLGVVMLELLTGRKPY 646
YS QSDVY+ G+V+ EL+TG+ PY
Sbjct: 200 NPYSFQSDVYAFGIVLYELMTGQLPY 225
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 71/206 (34%), Positives = 100/206 (48%), Gaps = 13/206 (6%)
Query: 445 GNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELI 504
G IG G G+VYK + G +AVK L+ T Q + F + + RH NI+ +
Sbjct: 29 GQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 86
Query: 505 GYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEP 564
GY Q +V + +L+ LH+ E KF I +A AR + YL
Sbjct: 87 GYSTA-PQLAIVTQWCEGSSLYHHLHASE---TKFEMKKLIDIARQTARGMDYLHA---K 139
Query: 565 PIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEF----ES 620
I+H + KS+NI L E V++ D GLA S + E L + APE +S
Sbjct: 140 SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDS 199
Query: 621 GSYSCQSDVYSLGVVMLELLTGRKPY 646
YS QSDVY+ G+V+ EL+TG+ PY
Sbjct: 200 NPYSFQSDVYAFGIVLYELMTGQLPY 225
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 101/206 (49%), Gaps = 13/206 (6%)
Query: 445 GNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELI 504
G IG G G+VYK + G +AVK L+ T Q + F + + RH NI+ +
Sbjct: 15 GQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 72
Query: 505 GYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEP 564
GY + Q +V + +L+ LH E KF I +A A+ + YL
Sbjct: 73 GYSTK-PQLAIVTQWCEGSSLYHHLHIIET---KFEMIKLIDIARQTAQGMDYLHA---K 125
Query: 565 PIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEF----ES 620
I+H + KS+NI L E L V++ D GLA + S + E L + APE +
Sbjct: 126 SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 185
Query: 621 GSYSCQSDVYSLGVVMLELLTGRKPY 646
YS QSDVY+ G+V+ EL+TG+ PY
Sbjct: 186 NPYSFQSDVYAFGIVLYELMTGQLPY 211
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 101/206 (49%), Gaps = 13/206 (6%)
Query: 445 GNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELI 504
G IG G G+VYK + G +AVK L+ T Q + F + + RH NI+ +
Sbjct: 13 GQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 70
Query: 505 GYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEP 564
GY + Q +V + +L+ LH E KF I +A A+ + YL
Sbjct: 71 GYSTK-PQLAIVTQWCEGSSLYHHLHIIET---KFEMIKLIDIARQTAQGMDYLHA---K 123
Query: 565 PIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEF----ES 620
I+H + KS+NI L E L V++ D GLA + S + E L + APE +
Sbjct: 124 SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 183
Query: 621 GSYSCQSDVYSLGVVMLELLTGRKPY 646
YS QSDVY+ G+V+ EL+TG+ PY
Sbjct: 184 NPYSFQSDVYAFGIVLYELMTGQLPY 209
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 101/206 (49%), Gaps = 13/206 (6%)
Query: 445 GNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELI 504
G IG G G+VYK + G +AVK L+ T Q + F + + RH NI+ +
Sbjct: 18 GQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 75
Query: 505 GYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEP 564
GY + Q +V + +L+ LH E KF I +A A+ + YL
Sbjct: 76 GYSTK-PQLAIVTQWCEGSSLYHHLHIIET---KFEMIKLIDIARQTAQGMDYLHA---K 128
Query: 565 PIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEF----ES 620
I+H + KS+NI L E L V++ D GLA + S + E L + APE +
Sbjct: 129 SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 188
Query: 621 GSYSCQSDVYSLGVVMLELLTGRKPY 646
YS QSDVY+ G+V+ EL+TG+ PY
Sbjct: 189 NPYSFQSDVYAFGIVLYELMTGQLPY 214
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 101/206 (49%), Gaps = 13/206 (6%)
Query: 445 GNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELI 504
G IG G G+VYK + G +AVK L+ T Q + F + + RH NI+ +
Sbjct: 18 GQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 75
Query: 505 GYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEP 564
GY + Q +V + +L+ LH E KF I +A A+ + YL
Sbjct: 76 GYSTK-PQLAIVTQWCEGSSLYHHLHIIET---KFEMIKLIDIARQTAQGMDYLHA---K 128
Query: 565 PIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEF----ES 620
I+H + KS+NI L E L V++ D GLA + S + E L + APE +
Sbjct: 129 SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 188
Query: 621 GSYSCQSDVYSLGVVMLELLTGRKPY 646
YS QSDVY+ G+V+ EL+TG+ PY
Sbjct: 189 NPYSFQSDVYAFGIVLYELMTGQLPY 214
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 101/206 (49%), Gaps = 13/206 (6%)
Query: 445 GNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELI 504
G IG G G+VYK + G +AVK L+ T Q + F + + RH NI+ +
Sbjct: 40 GQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 97
Query: 505 GYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEP 564
GY + Q +V + +L+ LH E KF I +A A+ + YL
Sbjct: 98 GYSTK-PQLAIVTQWCEGSSLYHHLHIIET---KFEMIKLIDIARQTAQGMDYLHA---K 150
Query: 565 PIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEF----ES 620
I+H + KS+NI L E L V++ D GLA + S + E L + APE +
Sbjct: 151 SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 210
Query: 621 GSYSCQSDVYSLGVVMLELLTGRKPY 646
YS QSDVY+ G+V+ EL+TG+ PY
Sbjct: 211 NPYSFQSDVYAFGIVLYELMTGQLPY 236
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 101/206 (49%), Gaps = 13/206 (6%)
Query: 445 GNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELI 504
G IG G G+VYK + G +AVK L+ T Q + F + + RH NI+ +
Sbjct: 41 GQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 98
Query: 505 GYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEP 564
GY + Q +V + +L+ LH E KF I +A A+ + YL
Sbjct: 99 GYSTK-PQLAIVTQWCEGSSLYHHLHIIET---KFEMIKLIDIARQTAQGMDYLHA---K 151
Query: 565 PIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEF----ES 620
I+H + KS+NI L E L V++ D GLA + S + E L + APE +
Sbjct: 152 SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 211
Query: 621 GSYSCQSDVYSLGVVMLELLTGRKPY 646
YS QSDVY+ G+V+ EL+TG+ PY
Sbjct: 212 NPYSFQSDVYAFGIVLYELMTGQLPY 237
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 100/206 (48%), Gaps = 13/206 (6%)
Query: 445 GNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELI 504
G IG G G+VYK + G +AVK L+ T Q + F + + RH NI+ +
Sbjct: 13 GQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 70
Query: 505 GYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEP 564
GY Q +V + +L+ LH E KF I +A A+ + YL
Sbjct: 71 GYSTA-PQLAIVTQWCEGSSLYHHLHIIET---KFEMIKLIDIARQTAQGMDYLHA---K 123
Query: 565 PIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEF----ES 620
I+H + KS+NI L E L V++ D GLA + S + E L + APE +
Sbjct: 124 SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 183
Query: 621 GSYSCQSDVYSLGVVMLELLTGRKPY 646
YS QSDVY+ G+V+ EL+TG+ PY
Sbjct: 184 NPYSFQSDVYAFGIVLYELMTGQLPY 209
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 100/206 (48%), Gaps = 13/206 (6%)
Query: 445 GNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELI 504
G IG G G+VYK + G +AVK L+ T Q + F + + RH NI+ +
Sbjct: 33 GQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 90
Query: 505 GYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEP 564
GY + Q +V + +L+ LH E KF I +A A+ + YL
Sbjct: 91 GYSTK-PQLAIVTQWCEGSSLYHHLHIIET---KFEMIKLIDIARQTAQGMDYLHA---K 143
Query: 565 PIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEF----ES 620
I+H + KS+NI L E L V++ D GLA S + E L + APE +
Sbjct: 144 SIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 203
Query: 621 GSYSCQSDVYSLGVVMLELLTGRKPY 646
YS QSDVY+ G+V+ EL+TG+ PY
Sbjct: 204 NPYSFQSDVYAFGIVLYELMTGQLPY 229
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 100/206 (48%), Gaps = 13/206 (6%)
Query: 445 GNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELI 504
G IG G G+VYK + G +AVK L+ T Q + F + + RH NI+ +
Sbjct: 13 GQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 70
Query: 505 GYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEP 564
GY + Q +V + +L+ LH E KF I +A A+ + YL
Sbjct: 71 GYSTK-PQLAIVTQWCEGSSLYHHLHIIET---KFEMIKLIDIARQTAQGMDYLHA---K 123
Query: 565 PIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEF----ES 620
I+H + KS+NI L E L V++ D GLA S + E L + APE +
Sbjct: 124 SIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 183
Query: 621 GSYSCQSDVYSLGVVMLELLTGRKPY 646
YS QSDVY+ G+V+ EL+TG+ PY
Sbjct: 184 NPYSFQSDVYAFGIVLYELMTGQLPY 209
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 100/206 (48%), Gaps = 13/206 (6%)
Query: 445 GNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELI 504
G IG G G+VYK + G +AVK L+ T Q + F + + RH NI+ +
Sbjct: 41 GQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 98
Query: 505 GYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEP 564
GY + Q +V + +L+ LH E KF I +A A+ + YL
Sbjct: 99 GYSTK-PQLAIVTQWCEGSSLYHHLHIIET---KFEMIKLIDIARQTAQGMDYLHA---K 151
Query: 565 PIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEF----ES 620
I+H + KS+NI L E L V++ D GLA S + E L + APE +
Sbjct: 152 SIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 211
Query: 621 GSYSCQSDVYSLGVVMLELLTGRKPY 646
YS QSDVY+ G+V+ EL+TG+ PY
Sbjct: 212 NPYSFQSDVYAFGIVLYELMTGQLPY 237
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 120/271 (44%), Gaps = 29/271 (10%)
Query: 448 IGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYC 507
IG G G V+ +A+K + ++E+F+E A + +L H +V+L G C
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIREGA---MSEEDFIEEAEVMMKLSHPKLVQLYGVC 69
Query: 508 NEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIV 567
E LV+++ + L D L + F+ + + L + YL+E C ++
Sbjct: 70 LEQAPICLVFEFMEHGCLSDYLRTQ---RGLFAAETLLGMCLDVCEGMAYLEEAC---VI 123
Query: 568 HGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPE-FESGSYSCQ 626
H + + N L+ E +++VSD G+ + S G +PE F YS +
Sbjct: 124 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS-STGTKFPVKWASPEVFSFSRYSSK 182
Query: 627 SDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDGAYLA 685
SDV+S GV+M E+ + G+ PY+ R +V DI R+ P L ++
Sbjct: 183 SDVWSFGVLMWEVFSEGKIPYEN---RSNSEVV-------EDISTGFRLYKPRLASTHVY 232
Query: 686 KSLSRFADIISRCVQWEPGFRPPMSEIVQDL 716
+ I++ C + P RP S +++ L
Sbjct: 233 Q-------IMNHCWKERPEDRPAFSRLLRQL 256
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 120/271 (44%), Gaps = 29/271 (10%)
Query: 448 IGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYC 507
IG G G V+ +A+K + ++E+F+E A + +L H +V+L G C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGA---MSEEDFIEEAEVMMKLSHPKLVQLYGVC 71
Query: 508 NEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIV 567
E LV+++ + L D L + F+ + + L + YL+E C ++
Sbjct: 72 LEQAPICLVFEFMEHGCLSDYLRTQ---RGLFAAETLLGMCLDVCEGMAYLEEAC---VI 125
Query: 568 HGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPE-FESGSYSCQ 626
H + + N L+ E +++VSD G+ + S G +PE F YS +
Sbjct: 126 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS-STGTKFPVKWASPEVFSFSRYSSK 184
Query: 627 SDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDGAYLA 685
SDV+S GV+M E+ + G+ PY+ R +V DI R+ P L ++
Sbjct: 185 SDVWSFGVLMWEVFSEGKIPYEN---RSNSEVV-------EDISTGFRLYKPRLASTHVY 234
Query: 686 KSLSRFADIISRCVQWEPGFRPPMSEIVQDL 716
+ I++ C + P RP S +++ L
Sbjct: 235 Q-------IMNHCWKERPEDRPAFSRLLRQL 258
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 120/271 (44%), Gaps = 29/271 (10%)
Query: 448 IGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYC 507
IG G G V+ +A+K + ++E+F+E A + +L H +V+L G C
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIREGA---MSEEDFIEEAEVMMKLSHPKLVQLYGVC 74
Query: 508 NEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIV 567
E LV+++ + L D L + F+ + + L + YL+E C ++
Sbjct: 75 LEQAPICLVFEFMEHGCLSDYLRTQ---RGLFAAETLLGMCLDVCEGMAYLEEAC---VI 128
Query: 568 HGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPE-FESGSYSCQ 626
H + + N L+ E +++VSD G+ + S G +PE F YS +
Sbjct: 129 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS-STGTKFPVKWASPEVFSFSRYSSK 187
Query: 627 SDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDGAYLA 685
SDV+S GV+M E+ + G+ PY+ R +V DI R+ P L ++
Sbjct: 188 SDVWSFGVLMWEVFSEGKIPYEN---RSNSEVV-------EDISTGFRLYKPRLASTHVY 237
Query: 686 KSLSRFADIISRCVQWEPGFRPPMSEIVQDL 716
+ I++ C + P RP S +++ L
Sbjct: 238 Q-------IMNHCWRERPEDRPAFSRLLRQL 261
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 100/211 (47%), Gaps = 13/211 (6%)
Query: 448 IGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYC 507
IG G G+VYK + G +AVK L + + F + + + RH NI+ +GY
Sbjct: 44 IGSGSFGTVYKGKWHGD--VAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYM 101
Query: 508 NEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIV 567
+ +V + +L+ LH E + F I +A A+ + YL I+
Sbjct: 102 TKDNL-AIVTQWCEGSSLYKHLHVQETKFQMFQL---IDIARQTAQGMDYLHA---KNII 154
Query: 568 HGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEF----ESGSY 623
H + KS+NI L E L V++ D GLA + S ++ E + APE ++ +
Sbjct: 155 HRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPF 214
Query: 624 SCQSDVYSLGVVMLELLTGRKPYDRSRPRGE 654
S QSDVYS G+V+ EL+TG PY R +
Sbjct: 215 SFQSDVYSYGIVLYELMTGELPYSHINNRDQ 245
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 117/270 (43%), Gaps = 27/270 (10%)
Query: 448 IGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYC 507
IG G G V+ +A+K + ++++F+E A + +L H +V+L G C
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKEG---SMSEDDFIEEAEVMMKLSHPKLVQLYGVC 91
Query: 508 NEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIV 567
E LV+++ + L D L + F+ + + L + YL+E C ++
Sbjct: 92 LEQAPICLVFEFMEHGCLSDYLRTQ---RGLFAAETLLGMCLDVCEGMAYLEEAC---VI 145
Query: 568 HGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFESGSYSCQS 627
H + + N L+ E +++VSD G+ + + + F YS +S
Sbjct: 146 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 205
Query: 628 DVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDGAYLAK 686
DV+S GV+M E+ + G+ PY+ R +V DI R+ P L ++ +
Sbjct: 206 DVWSFGVLMWEVFSEGKIPYEN---RSNSEVV-------EDISTGFRLYKPRLASTHVYQ 255
Query: 687 SLSRFADIISRCVQWEPGFRPPMSEIVQDL 716
I++ C + P RP S +++ L
Sbjct: 256 -------IMNHCWKERPEDRPAFSRLLRQL 278
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 131/283 (46%), Gaps = 39/283 (13%)
Query: 448 IGEGLLGSVYKAELPGGK-LLAVKKLSNTVSQRQTD-----EEFLELASTISRLRHGNIV 501
IG+G G V+K L K ++A+K L S+ +T+ +EF +S L H NIV
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 502 ELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEV 561
+L G H +V ++ DL H + W++++R+ L A ++Y+Q
Sbjct: 87 KLYGLM--HNPPRMVMEF---VPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQ 141
Query: 562 CEPPIVHGNFKSSNILL---DEKLIV--RVSDCGLAPLLFSGSTNELSEGLLTAHGSGAP 616
PPIVH + +S NI L DE V +V+D GL+ S + +S GLL AP
Sbjct: 142 -NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS----QQSVHSVS-GLLGNFQWMAP 195
Query: 617 EF---ESGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSR 673
E E SY+ ++D YS +++ +LTG P+D E S + I ++
Sbjct: 196 ETIGAEEESYTEKADTYSFAMILYTILTGEGPFD------EYSYGK--------IKFINM 241
Query: 674 MVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDL 716
+ + L R ++I C +P RP S IV++L
Sbjct: 242 IREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKEL 284
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 119/271 (43%), Gaps = 29/271 (10%)
Query: 448 IGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYC 507
IG G G V+ +A+K + ++E+F+E A + +L H +V+L G C
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIREGA---MSEEDFIEEAEVMMKLSHPKLVQLYGVC 72
Query: 508 NEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIV 567
E LV ++ + L D L + F+ + + L + YL+E C ++
Sbjct: 73 LEQAPICLVTEFMEHGCLSDYLRTQ---RGLFAAETLLGMCLDVCEGMAYLEEAC---VI 126
Query: 568 HGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPE-FESGSYSCQ 626
H + + N L+ E +++VSD G+ + S G +PE F YS +
Sbjct: 127 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS-STGTKFPVKWASPEVFSFSRYSSK 185
Query: 627 SDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDGAYLA 685
SDV+S GV+M E+ + G+ PY+ R +V DI R+ P L ++
Sbjct: 186 SDVWSFGVLMWEVFSEGKIPYEN---RSNSEVV-------EDISTGFRLYKPRLASTHVY 235
Query: 686 KSLSRFADIISRCVQWEPGFRPPMSEIVQDL 716
+ I++ C + P RP S +++ L
Sbjct: 236 Q-------IMNHCWRERPEDRPAFSRLLRQL 259
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 106/211 (50%), Gaps = 21/211 (9%)
Query: 447 FIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQ--RQTDEEFLELASTISRLRHGNIVELI 504
IG G G VY+A G ++ AVK + + QT E + A + L+H NI+ L
Sbjct: 14 IIGIGGFGKVYRAFWIGDEV-AVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALR 72
Query: 505 GYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEP 564
G C + LV ++ L+ +L K+ +I + A+ AR + YL +
Sbjct: 73 GVCLKEPNLCLVMEFARGGPLNRVLSG-----KRIPPDILVNWAVQIARGMNYLHDEAIV 127
Query: 565 PIVHGNFKSSNILLDEKL--------IVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAP 616
PI+H + KSSNIL+ +K+ I++++D GLA + +T + G A+ AP
Sbjct: 128 PIIHRDLKSSNILILQKVENGDLSNKILKITDFGLA-REWHRTTKMSAAG---AYAWMAP 183
Query: 617 EFESGS-YSCQSDVYSLGVVMLELLTGRKPY 646
E S +S SDV+S GV++ ELLTG P+
Sbjct: 184 EVIRASMFSKGSDVWSYGVLLWELLTGEVPF 214
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 119/271 (43%), Gaps = 29/271 (10%)
Query: 448 IGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYC 507
IG G G V+ +A+K + ++E+F+E A + +L H +V+L G C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGA---MSEEDFIEEAEVMMKLSHPKLVQLYGVC 71
Query: 508 NEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIV 567
E LV+++ + L D L + F+ + + L + YL+E ++
Sbjct: 72 LEQAPICLVFEFMEHGCLSDYLRTQ---RGLFAAETLLGMCLDVCEGMAYLEEA---SVI 125
Query: 568 HGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPE-FESGSYSCQ 626
H + + N L+ E +++VSD G+ + S G +PE F YS +
Sbjct: 126 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS-STGTKFPVKWASPEVFSFSRYSSK 184
Query: 627 SDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDGAYLA 685
SDV+S GV+M E+ + G+ PY+ R +V DI R+ P L ++
Sbjct: 185 SDVWSFGVLMWEVFSEGKIPYEN---RSNSEVV-------EDISTGFRLYKPRLASTHVY 234
Query: 686 KSLSRFADIISRCVQWEPGFRPPMSEIVQDL 716
+ I++ C + P RP S +++ L
Sbjct: 235 Q-------IMNHCWKERPEDRPAFSRLLRQL 258
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 130/283 (45%), Gaps = 39/283 (13%)
Query: 448 IGEGLLGSVYKAELPGGK-LLAVKKLSNTVSQRQTD-----EEFLELASTISRLRHGNIV 501
IG+G G V+K L K ++A+K L S+ +T+ +EF +S L H NIV
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 502 ELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEV 561
+L G H +V ++ DL H + W++++R+ L A ++Y+Q
Sbjct: 87 KLYGLM--HNPPRMVMEF---VPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQ 141
Query: 562 CEPPIVHGNFKSSNILL---DEKLIV--RVSDCGLAPLLFSGSTNELSEGLLTAHGSGAP 616
PPIVH + +S NI L DE V +V+D G + S + +S GLL AP
Sbjct: 142 -NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTS----QQSVHSVS-GLLGNFQWMAP 195
Query: 617 EF---ESGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSR 673
E E SY+ ++D YS +++ +LTG P+D E S + I ++
Sbjct: 196 ETIGAEEESYTEKADTYSFAMILYTILTGEGPFD------EYSYGK--------IKFINM 241
Query: 674 MVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDL 716
+ + L R ++I C +P RP S IV++L
Sbjct: 242 IREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKEL 284
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 124/274 (45%), Gaps = 40/274 (14%)
Query: 448 IGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYC 507
+G G G V KA+ K +A+K++ + S+R+ F+ +SR+ H NIV+L G C
Sbjct: 17 VGRGAFGVVCKAKW-RAKDVAIKQIESE-SERKA---FIVELRQLSRVNHPNIVKLYGAC 71
Query: 508 NEHGQHLLVYDYGGNCTLHDLLHSDE-----EAHKKFSWNIRIRVALGAARALQYLQEVC 562
LV +Y +L+++LH E A SW L ++ + YL +
Sbjct: 72 L--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW------CLQCSQGVAYLHSMQ 123
Query: 563 EPPIVHGNFKSSNILLDEK-LIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPE-FES 620
++H + K N+LL ++++ D G A + + TN A PE FE
Sbjct: 124 PKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMA-----PEVFEG 178
Query: 621 GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLD 680
+YS + DV+S G+++ E++T RKP+D G + WA+ + + P
Sbjct: 179 SNYSEKCDVFSWGIILWEVITRRKPFDEI--GGPAFRIMWAVHNGTRPPLIKNLPKP--- 233
Query: 681 GAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQ 714
+++RC +P RP M EIV+
Sbjct: 234 ----------IESLMTRCWSKDPSQRPSMEEIVK 257
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 131/283 (46%), Gaps = 39/283 (13%)
Query: 448 IGEGLLGSVYKAELPGGK-LLAVKKLSNTVSQRQTD-----EEFLELASTISRLRHGNIV 501
IG+G G V+K L K ++A+K L S+ +T+ +EF +S L H NIV
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 502 ELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEV 561
+L G + + ++ + G DL H + W++++R+ L A ++Y+Q
Sbjct: 87 KLYGLMHNPPRMVMEFVPCG-----DLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQN- 140
Query: 562 CEPPIVHGNFKSSNILL---DEKLIV--RVSDCGLAPLLFSGSTNELSEGLLTAHGSGAP 616
PPIVH + +S NI L DE V +V+D L+ S + +S GLL AP
Sbjct: 141 QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLS----QQSVHSVS-GLLGNFQWMAP 195
Query: 617 EF---ESGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSR 673
E E SY+ ++D YS +++ +LTG P+D E S + I ++
Sbjct: 196 ETIGAEEESYTEKADTYSFAMILYTILTGEGPFD------EYSYGK--------IKFINM 241
Query: 674 MVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDL 716
+ + L R ++I C +P RP S IV++L
Sbjct: 242 IREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKEL 284
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 124/274 (45%), Gaps = 40/274 (14%)
Query: 448 IGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYC 507
+G G G V KA+ K +A+K++ + S+R+ F+ +SR+ H NIV+L G C
Sbjct: 16 VGRGAFGVVCKAKW-RAKDVAIKQIESE-SERKA---FIVELRQLSRVNHPNIVKLYGAC 70
Query: 508 NEHGQHLLVYDYGGNCTLHDLLHSDE-----EAHKKFSWNIRIRVALGAARALQYLQEVC 562
LV +Y +L+++LH E A SW L ++ + YL +
Sbjct: 71 L--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW------CLQCSQGVAYLHSMQ 122
Query: 563 EPPIVHGNFKSSNILLDEK-LIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPE-FES 620
++H + K N+LL ++++ D G A + + TN A PE FE
Sbjct: 123 PKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMA-----PEVFEG 177
Query: 621 GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLD 680
+YS + DV+S G+++ E++T RKP+D G + WA+ + + P
Sbjct: 178 SNYSEKCDVFSWGIILWEVITRRKPFDEI--GGPAFRIMWAVHNGTRPPLIKNLPKP--- 232
Query: 681 GAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQ 714
+++RC +P RP M EIV+
Sbjct: 233 ----------IESLMTRCWSKDPSQRPSMEEIVK 256
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 123/276 (44%), Gaps = 29/276 (10%)
Query: 448 IGEGLLGSVYKAELPGGKL-LAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGY 506
+G G G VY+ L +AVK L + EEFL+ A+ + ++H N+V+L+G
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV---EEFLKEAAVMKEIKHPNLVQLLGV 284
Query: 507 CNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPI 566
C ++ ++ L D L E ++ S + + +A + A++YL+ +
Sbjct: 285 CTREPPFYIITEFMTYGNLLDYLR--ECNRQEVSAVVLLYMATQISSAMEYLE---KKNF 339
Query: 567 VHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPE-FESGSYSC 625
+H N + N L+ E +V+V+D GL+ L+ +G T G APE +S
Sbjct: 340 IHRNLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSI 398
Query: 626 QSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDGAYL 684
+SDV++ GV++ E+ T G PY P + D+ + +++
Sbjct: 399 KSDVWAFGVLLWEIATYGMSPY----------------PGI-DLSQVYELLEKDYRMERP 441
Query: 685 AKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI 720
+ +++ C QW P RP +EI Q M
Sbjct: 442 EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 477
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 122/276 (44%), Gaps = 29/276 (10%)
Query: 448 IGEGLLGSVYKAELPGGKL-LAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGY 506
+G G G VY+ L +AVK L + EEFL+ A+ + ++H N+V+L+G
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEV---EEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 507 CNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPI 566
C ++ ++ L D L E ++ S + + +A + A++YL+ +
Sbjct: 76 CTREPPFYIITEFMTYGNLLDYLR--ECNRQEVSAVVLLYMATQISSAMEYLE---KKNF 130
Query: 567 VHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPE-FESGSYSC 625
+H + + N L+ E +V+V+D GL+ L+ +G T G APE +S
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESLAYNKFSI 189
Query: 626 QSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDGAYL 684
+SDV++ GV++ E+ T G PY P L ++ RM P
Sbjct: 190 KSDVWAFGVLLWEIATYGMSPYPGIDPSQVYEL----------LEKDYRMERPE------ 233
Query: 685 AKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI 720
+ +++ C QW P RP +EI Q M
Sbjct: 234 -GCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 268
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 122/276 (44%), Gaps = 29/276 (10%)
Query: 448 IGEGLLGSVYKAELPGGKL-LAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGY 506
+G G G VY+ L +AVK L + EEFL+ A+ + ++H N+V+L+G
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV---EEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 507 CNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPI 566
C ++ ++ L D L E ++ S + + +A + A++YL+ +
Sbjct: 76 CTREPPFYIIIEFMTYGNLLDYLR--ECNRQEVSAVVLLYMATQISSAMEYLE---KKNF 130
Query: 567 VHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPE-FESGSYSC 625
+H + + N L+ E +V+V+D GL+ L+ +G T G APE +S
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESLAYNKFSI 189
Query: 626 QSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDGAYL 684
+SDV++ GV++ E+ T G PY P L ++ RM P
Sbjct: 190 KSDVWAFGVLLWEIATYGMSPYPGIDPSQVYEL----------LEKDYRMERPE------ 233
Query: 685 AKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI 720
+ +++ C QW P RP +EI Q M
Sbjct: 234 -GCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 268
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 99/210 (47%), Gaps = 30/210 (14%)
Query: 448 IGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGY- 506
IG+G G V + G K+ AVK + N T + FL AS +++LRH N+V+L+G
Sbjct: 20 IGKGEFGDVMLGDYRGNKV-AVKCIKNDA----TAQAFLAEASVMTQLRHSNLVQLLGVI 74
Query: 507 CNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPP- 565
E G +V +Y +L D L S R R LG L++ +VCE
Sbjct: 75 VEEKGGLYIVTEYMAKGSLVDYLRS------------RGRSVLGGDCLLKFSLDVCEAME 122
Query: 566 ------IVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE 619
VH + + N+L+ E + +VSD GL +++ G L +
Sbjct: 123 YLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLT----KEASSTQDTGKLPVKWTAPEALR 178
Query: 620 SGSYSCQSDVYSLGVVMLELLT-GRKPYDR 648
++S +SDV+S G+++ E+ + GR PY R
Sbjct: 179 EAAFSTKSDVWSFGILLWEIYSFGRVPYPR 208
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 122/276 (44%), Gaps = 29/276 (10%)
Query: 448 IGEGLLGSVYKAELPGGKL-LAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGY 506
+G G G VY+ L +AVK L + EEFL+ A+ + ++H N+V+L+G
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV---EEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 507 CNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPI 566
C ++ ++ L D L E ++ S + + +A + A++YL+ +
Sbjct: 76 CTREPPFYIITEFMTYGNLLDYLR--ECNRQEVSAVVLLYMATQISSAMEYLE---KKNF 130
Query: 567 VHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPE-FESGSYSC 625
+H + + N L+ E +V+V+D GL+ L+ +G T G APE +S
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTFTAHAGAKFPIKWTAPESLAYNKFSI 189
Query: 626 QSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDGAYL 684
+SDV++ GV++ E+ T G PY P L ++ RM P
Sbjct: 190 KSDVWAFGVLLWEIATYGMSPYPGIDPSQVYEL----------LEKDYRMERPE------ 233
Query: 685 AKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI 720
+ +++ C QW P RP +EI Q M
Sbjct: 234 -GCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 268
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 123/276 (44%), Gaps = 29/276 (10%)
Query: 448 IGEGLLGSVYKAELPGGKL-LAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGY 506
+G G G VY+ L +AVK L + EEFL+ A+ + ++H N+V+L+G
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV---EEFLKEAAVMKEIKHPNLVQLLGV 281
Query: 507 CNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPI 566
C ++ ++ L D L E ++ + + + +A + A++YL+ +
Sbjct: 282 CTREPPFYIITEFMTYGNLLDYLR--ECNRQEVNAVVLLYMATQISSAMEYLE---KKNF 336
Query: 567 VHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPE-FESGSYSC 625
+H N + N L+ E +V+V+D GL+ L+ +G T G APE +S
Sbjct: 337 IHRNLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSI 395
Query: 626 QSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDGAYL 684
+SDV++ GV++ E+ T G PY P + D+ + +++
Sbjct: 396 KSDVWAFGVLLWEIATYGMSPY----------------PGI-DLSQVYELLEKDYRMERP 438
Query: 685 AKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI 720
+ +++ C QW P RP +EI Q M
Sbjct: 439 EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 474
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 123/276 (44%), Gaps = 29/276 (10%)
Query: 448 IGEGLLGSVYKAELPGGKL-LAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGY 506
+G G G VY+ L +AVK L + EEFL+ A+ + ++H N+V+L+G
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV---EEFLKEAAVMKEIKHPNLVQLLGV 323
Query: 507 CNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPI 566
C ++ ++ L D L E ++ + + + +A + A++YL+ +
Sbjct: 324 CTREPPFYIITEFMTYGNLLDYLR--ECNRQEVNAVVLLYMATQISSAMEYLE---KKNF 378
Query: 567 VHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPE-FESGSYSC 625
+H N + N L+ E +V+V+D GL+ L+ +G T G APE +S
Sbjct: 379 IHRNLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSI 437
Query: 626 QSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDGAYL 684
+SDV++ GV++ E+ T G PY P + D+ + +++
Sbjct: 438 KSDVWAFGVLLWEIATYGMSPY----------------PGI-DLSQVYELLEKDYRMERP 480
Query: 685 AKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI 720
+ +++ C QW P RP +EI Q M
Sbjct: 481 EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 516
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 98/210 (46%), Gaps = 30/210 (14%)
Query: 448 IGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGY- 506
IG+G G V + G K+ AVK + N T + FL AS +++LRH N+V+L+G
Sbjct: 14 IGKGEFGDVMLGDYRGNKV-AVKCIKNDA----TAQAFLAEASVMTQLRHSNLVQLLGVI 68
Query: 507 CNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPP- 565
E G +V +Y +L D L S R R LG L++ +VCE
Sbjct: 69 VEEKGGLYIVTEYMAKGSLVDYLRS------------RGRSVLGGDCLLKFSLDVCEAME 116
Query: 566 ------IVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE 619
VH + + N+L+ E + +VSD GL +++ G L +
Sbjct: 117 YLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLT----KEASSTQDTGKLPVKWTAPEALR 172
Query: 620 SGSYSCQSDVYSLGVVMLELLT-GRKPYDR 648
+S +SDV+S G+++ E+ + GR PY R
Sbjct: 173 EKKFSTKSDVWSFGILLWEIYSFGRVPYPR 202
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 126/284 (44%), Gaps = 38/284 (13%)
Query: 448 IGEGLLGSVYKAELP--GGKL---LAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVE 502
IG G G VYK L GK +A+K L +++Q +FL A + + H NI+
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQR-VDFLGEAGIMGQFSHHNIIR 110
Query: 503 LIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVC 562
L G +++ +++ +Y N L L E +FS + + G A ++YL +
Sbjct: 111 LEGVISKYKPMMIITEYMENGALDKFLR---EKDGEFSVLQLVGMLRGIAAGMKYLANMN 167
Query: 563 EPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSG--STNELSEGLLTAHGSGAPEFES 620
VH + + NIL++ L+ +VSD GL+ +L +T S G + +
Sbjct: 168 ---YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISY 224
Query: 621 GSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSL 679
++ SDV+S G+VM E++T G +PY W + + A++
Sbjct: 225 RKFTSASDVWSFGIVMWEVMTYGERPY-------------WELSNHEVMKAIN------- 264
Query: 680 DGAYLAKSL---SRFADIISRCVQWEPGFRPPMSEIVQDLLCMI 720
DG L + S ++ +C Q E RP ++IV L +I
Sbjct: 265 DGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLI 308
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 98/210 (46%), Gaps = 30/210 (14%)
Query: 448 IGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGY- 506
IG+G G V + G K+ AVK + N T + FL AS +++LRH N+V+L+G
Sbjct: 201 IGKGEFGDVMLGDYRGNKV-AVKCIKNDA----TAQAFLAEASVMTQLRHSNLVQLLGVI 255
Query: 507 CNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEP-- 564
E G +V +Y +L D L S R R LG L++ +VCE
Sbjct: 256 VEEKGGLYIVTEYMAKGSLVDYLRS------------RGRSVLGGDCLLKFSLDVCEAME 303
Query: 565 -----PIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE 619
VH + + N+L+ E + +VSD GL +++ G L +
Sbjct: 304 YLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLT----KEASSTQDTGKLPVKWTAPEALR 359
Query: 620 SGSYSCQSDVYSLGVVMLELLT-GRKPYDR 648
+S +SDV+S G+++ E+ + GR PY R
Sbjct: 360 EKKFSTKSDVWSFGILLWEIYSFGRVPYPR 389
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 98/210 (46%), Gaps = 30/210 (14%)
Query: 448 IGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGY- 506
IG+G G V + G K+ AVK + N T + FL AS +++LRH N+V+L+G
Sbjct: 29 IGKGEFGDVMLGDYRGNKV-AVKCIKNDA----TAQAFLAEASVMTQLRHSNLVQLLGVI 83
Query: 507 CNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPP- 565
E G +V +Y +L D L S R R LG L++ +VCE
Sbjct: 84 VEEKGGLYIVTEYMAKGSLVDYLRS------------RGRSVLGGDCLLKFSLDVCEAME 131
Query: 566 ------IVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE 619
VH + + N+L+ E + +VSD GL +++ G L +
Sbjct: 132 YLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLT----KEASSTQDTGKLPVKWTAPEALR 187
Query: 620 SGSYSCQSDVYSLGVVMLELLT-GRKPYDR 648
+S +SDV+S G+++ E+ + GR PY R
Sbjct: 188 EKKFSTKSDVWSFGILLWEIYSFGRVPYPR 217
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 123/276 (44%), Gaps = 29/276 (10%)
Query: 448 IGEGLLGSVYKAELPGGKL-LAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGY 506
+G G G VY+ L +AVK L + EEFL+ A+ + ++H N+V+L+G
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV---EEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 507 CNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPI 566
C ++ ++ L D L E ++ S + + +A + A++YL+ +
Sbjct: 83 CTREPPFYIITEFMTYGNLLDYLR--ECNRQEVSAVVLLYMATQISSAMEYLE---KKNF 137
Query: 567 VHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPE-FESGSYSC 625
+H + + N L+ E +V+V+D GL+ L+ +G T G APE +S
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSI 196
Query: 626 QSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDGAYL 684
+SDV++ GV++ E+ T G PY P + D+ + +++
Sbjct: 197 KSDVWAFGVLLWEIATYGMSPY----------------PGI-DLSQVYELLEKDYRMERP 239
Query: 685 AKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI 720
+ +++ C QW P RP +EI Q M
Sbjct: 240 EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 275
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 123/276 (44%), Gaps = 29/276 (10%)
Query: 448 IGEGLLGSVYKAELPGGKL-LAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGY 506
+G G G VY+ L +AVK L + EEFL+ A+ + ++H N+V+L+G
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV---EEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 507 CNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPI 566
C ++ ++ L D L E ++ S + + +A + A++YL+ +
Sbjct: 78 CTREPPFYIIIEFMTYGNLLDYLR--ECNRQEVSAVVLLYMATQISSAMEYLE---KKNF 132
Query: 567 VHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPE-FESGSYSC 625
+H + + N L+ E +V+V+D GL+ L+ +G T G APE +S
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSI 191
Query: 626 QSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDGAYL 684
+SDV++ GV++ E+ T G PY P + D+ + +++
Sbjct: 192 KSDVWAFGVLLWEIATYGMSPY----------------PGI-DLSQVYELLEKDYRMERP 234
Query: 685 AKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI 720
+ +++ C QW P RP +EI Q M
Sbjct: 235 EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 270
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 123/276 (44%), Gaps = 29/276 (10%)
Query: 448 IGEGLLGSVYKAELPGGKL-LAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGY 506
+G G G VY+ L +AVK L + EEFL+ A+ + ++H N+V+L+G
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV---EEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 507 CNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPI 566
C ++ ++ L D L E ++ S + + +A + A++YL+ +
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYLR--ECNRQEVSAVVLLYMATQISSAMEYLE---KKNF 132
Query: 567 VHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPE-FESGSYSC 625
+H + + N L+ E +V+V+D GL+ L+ +G T G APE +S
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSI 191
Query: 626 QSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDGAYL 684
+SDV++ GV++ E+ T G PY P + D+ + +++
Sbjct: 192 KSDVWAFGVLLWEIATYGMSPY----------------PGI-DLSQVYELLEKDYRMERP 234
Query: 685 AKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI 720
+ +++ C QW P RP +EI Q M
Sbjct: 235 EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 270
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 123/276 (44%), Gaps = 29/276 (10%)
Query: 448 IGEGLLGSVYKAELPGGKL-LAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGY 506
+G G G VY+ L +AVK L + EEFL+ A+ + ++H N+V+L+G
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV---EEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 507 CNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPI 566
C ++ ++ L D L E ++ S + + +A + A++YL+ +
Sbjct: 78 CTREPPFYIIIEFMTYGNLLDYLR--ECNRQEVSAVVLLYMATQISSAMEYLE---KKNF 132
Query: 567 VHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPE-FESGSYSC 625
+H + + N L+ E +V+V+D GL+ L+ +G T G APE +S
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSI 191
Query: 626 QSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDGAYL 684
+SDV++ GV++ E+ T G PY P + D+ + +++
Sbjct: 192 KSDVWAFGVLLWEIATYGMSPY----------------PGI-DLSQVYELLEKDYRMERP 234
Query: 685 AKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI 720
+ +++ C QW P RP +EI Q M
Sbjct: 235 EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 270
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 123/276 (44%), Gaps = 29/276 (10%)
Query: 448 IGEGLLGSVYKAELPGGKL-LAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGY 506
+G G G VY+ L +AVK L + EEFL+ A+ + ++H N+V+L+G
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV---EEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 507 CNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPI 566
C ++ ++ L D L E ++ S + + +A + A++YL+ +
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYLR--ECNRQEVSAVVLLYMATQISSAMEYLE---KKNF 132
Query: 567 VHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPE-FESGSYSC 625
+H + + N L+ E +V+V+D GL+ L+ +G T G APE +S
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSI 191
Query: 626 QSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDGAYL 684
+SDV++ GV++ E+ T G PY P + D+ + +++
Sbjct: 192 KSDVWAFGVLLWEIATYGMSPY----------------PGI-DLSQVYELLEKDYRMERP 234
Query: 685 AKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI 720
+ +++ C QW P RP +EI Q M
Sbjct: 235 EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 270
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 123/276 (44%), Gaps = 29/276 (10%)
Query: 448 IGEGLLGSVYKAELPGGKL-LAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGY 506
+G G G VY+ L +AVK L + EEFL+ A+ + ++H N+V+L+G
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV---EEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 507 CNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPI 566
C ++ ++ L D L E ++ + + + +A + A++YL+ +
Sbjct: 83 CTREPPFYIITEFMTYGNLLDYLR--ECNRQEVNAVVLLYMATQISSAMEYLE---KKNF 137
Query: 567 VHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPE-FESGSYSC 625
+H + + N L+ E +V+V+D GL+ L+ +G T G APE +S
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESLAYNKFSI 196
Query: 626 QSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDGAYL 684
+SDV++ GV++ E+ T G PY P + D+ + +++
Sbjct: 197 KSDVWAFGVLLWEIATYGMSPY----------------PGI-DLSQVYELLEKDYRMERP 239
Query: 685 AKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI 720
+ +++ C QW P RP +EI Q M
Sbjct: 240 EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 275
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 123/276 (44%), Gaps = 29/276 (10%)
Query: 448 IGEGLLGSVYKAELPGGKL-LAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGY 506
+G G G VY+ L +AVK L + EEFL+ A+ + ++H N+V+L+G
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV---EEFLKEAAVMKEIKHPNLVQLLGV 78
Query: 507 CNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPI 566
C ++ ++ L D L E ++ + + + +A + A++YL+ +
Sbjct: 79 CTREPPFYIIIEFMTYGNLLDYLR--ECNRQEVNAVVLLYMATQISSAMEYLE---KKNF 133
Query: 567 VHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPE-FESGSYSC 625
+H + + N L+ E +V+V+D GL+ L+ +G T G APE +S
Sbjct: 134 IHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESLAYNKFSI 192
Query: 626 QSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDGAYL 684
+SDV++ GV++ E+ T G PY P + D+ + +++
Sbjct: 193 KSDVWAFGVLLWEIATYGMSPY----------------PGI-DLSQVYELLEKDYRMERP 235
Query: 685 AKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI 720
+ +++ C QW P RP +EI Q M
Sbjct: 236 EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 271
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 123/276 (44%), Gaps = 29/276 (10%)
Query: 448 IGEGLLGSVYKAELPGGKL-LAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGY 506
+G G G VY+ L +AVK L + EEFL+ A+ + ++H N+V+L+G
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV---EEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 507 CNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPI 566
C ++ ++ L D L E ++ + + + +A + A++YL+ +
Sbjct: 83 CTREPPFYIIIEFMTYGNLLDYLR--ECNRQEVNAVVLLYMATQISSAMEYLE---KKNF 137
Query: 567 VHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPE-FESGSYSC 625
+H + + N L+ E +V+V+D GL+ L+ +G T G APE +S
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSI 196
Query: 626 QSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDGAYL 684
+SDV++ GV++ E+ T G PY P + D+ + +++
Sbjct: 197 KSDVWAFGVLLWEIATYGMSPY----------------PGI-DLSQVYELLEKDYRMERP 239
Query: 685 AKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI 720
+ +++ C QW P RP +EI Q M
Sbjct: 240 EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 275
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 123/276 (44%), Gaps = 29/276 (10%)
Query: 448 IGEGLLGSVYKAELPGGKL-LAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGY 506
+G G G VY+ L +AVK L + EEFL+ A+ + ++H N+V+L+G
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV---EEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 507 CNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPI 566
C ++ ++ L D L E ++ + + + +A + A++YL+ +
Sbjct: 83 CTREPPFYIITEFMTYGNLLDYLR--ECNRQEVNAVVLLYMATQISSAMEYLE---KKNF 137
Query: 567 VHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPE-FESGSYSC 625
+H + + N L+ E +V+V+D GL+ L+ +G T G APE +S
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSI 196
Query: 626 QSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDGAYL 684
+SDV++ GV++ E+ T G PY P + D+ + +++
Sbjct: 197 KSDVWAFGVLLWEIATYGMSPY----------------PGI-DLSQVYELLEKDYRMERP 239
Query: 685 AKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI 720
+ +++ C QW P RP +EI Q M
Sbjct: 240 EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 275
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 123/276 (44%), Gaps = 29/276 (10%)
Query: 448 IGEGLLGSVYKAELPGGKL-LAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGY 506
+G G G VY+ L +AVK L + EEFL+ A+ + ++H N+V+L+G
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV---EEFLKEAAVMKEIKHPNLVQLLGV 81
Query: 507 CNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPI 566
C ++ ++ L D L E ++ + + + +A + A++YL+ +
Sbjct: 82 CTREPPFYIITEFMTYGNLLDYLR--ECNRQEVNAVVLLYMATQISSAMEYLE---KKNF 136
Query: 567 VHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPE-FESGSYSC 625
+H + + N L+ E +V+V+D GL+ L+ +G T G APE +S
Sbjct: 137 IHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSI 195
Query: 626 QSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDGAYL 684
+SDV++ GV++ E+ T G PY P + D+ + +++
Sbjct: 196 KSDVWAFGVLLWEIATYGMSPY----------------PGI-DLSQVYELLEKDYRMERP 238
Query: 685 AKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI 720
+ +++ C QW P RP +EI Q M
Sbjct: 239 EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 274
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 123/276 (44%), Gaps = 29/276 (10%)
Query: 448 IGEGLLGSVYKAELPGGKL-LAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGY 506
+G G G VY+ L +AVK L + EEFL+ A+ + ++H N+V+L+G
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV---EEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 507 CNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPI 566
C ++ ++ L D L E ++ + + + +A + A++YL+ +
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYLR--ECNRQEVNAVVLLYMATQISSAMEYLE---KKNF 132
Query: 567 VHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPE-FESGSYSC 625
+H + + N L+ E +V+V+D GL+ L+ +G T G APE +S
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSI 191
Query: 626 QSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDGAYL 684
+SDV++ GV++ E+ T G PY P + D+ + +++
Sbjct: 192 KSDVWAFGVLLWEIATYGMSPY----------------PGI-DLSQVYELLEKDYRMERP 234
Query: 685 AKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI 720
+ +++ C QW P RP +EI Q M
Sbjct: 235 EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 270
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 123/276 (44%), Gaps = 29/276 (10%)
Query: 448 IGEGLLGSVYKAELPGGKL-LAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGY 506
+G G G VY+ L +AVK L + EEFL+ A+ + ++H N+V+L+G
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV---EEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 507 CNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPI 566
C ++ ++ L D L E ++ + + + +A + A++YL+ +
Sbjct: 83 CTREPPFYIITEFMTYGNLLDYLR--ECNRQEVNAVVLLYMATQISSAMEYLE---KKNF 137
Query: 567 VHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPE-FESGSYSC 625
+H + + N L+ E +V+V+D GL+ L+ +G T G APE +S
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSI 196
Query: 626 QSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDGAYL 684
+SDV++ GV++ E+ T G PY P + D+ + +++
Sbjct: 197 KSDVWAFGVLLWEIATYGMSPY----------------PGI-DLSQVYELLEKDYRMERP 239
Query: 685 AKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI 720
+ +++ C QW P RP +EI Q M
Sbjct: 240 EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 275
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 123/276 (44%), Gaps = 29/276 (10%)
Query: 448 IGEGLLGSVYKAELPGGKL-LAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGY 506
+G G G VY+ L +AVK L + EEFL+ A+ + ++H N+V+L+G
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV---EEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 507 CNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPI 566
C ++ ++ L D L E ++ + + + +A + A++YL+ +
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYLR--ECNRQEVNAVVLLYMATQISSAMEYLE---KKNF 132
Query: 567 VHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPE-FESGSYSC 625
+H + + N L+ E +V+V+D GL+ L+ +G T G APE +S
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSI 191
Query: 626 QSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDGAYL 684
+SDV++ GV++ E+ T G PY P + D+ + +++
Sbjct: 192 KSDVWAFGVLLWEIATYGMSPY----------------PGI-DLSQVYELLEKDYRMERP 234
Query: 685 AKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI 720
+ +++ C QW P RP +EI Q M
Sbjct: 235 EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 270
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 123/276 (44%), Gaps = 29/276 (10%)
Query: 448 IGEGLLGSVYKAELPGGKL-LAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGY 506
+G G G VY+ L +AVK L + EEFL+ A+ + ++H N+V+L+G
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV---EEFLKEAAVMKEIKHPNLVQLLGV 78
Query: 507 CNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPI 566
C ++ ++ L D L E ++ + + + +A + A++YL+ +
Sbjct: 79 CTREPPFYIITEFMTYGNLLDYLR--ECNRQEVNAVVLLYMATQISSAMEYLE---KKNF 133
Query: 567 VHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPE-FESGSYSC 625
+H + + N L+ E +V+V+D GL+ L+ +G T G APE +S
Sbjct: 134 IHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAPAGAKFPIKWTAPESLAYNKFSI 192
Query: 626 QSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDGAYL 684
+SDV++ GV++ E+ T G PY P + D+ + +++
Sbjct: 193 KSDVWAFGVLLWEIATYGMSPY----------------PGI-DLSQVYELLEKDYRMERP 235
Query: 685 AKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI 720
+ +++ C QW P RP +EI Q M
Sbjct: 236 EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 271
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 123/276 (44%), Gaps = 29/276 (10%)
Query: 448 IGEGLLGSVYKAELPGGKL-LAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGY 506
+G G G VY+ L +AVK L + EEFL+ A+ + ++H N+V+L+G
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV---EEFLKEAAVMKEIKHPNLVQLLGV 90
Query: 507 CNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPI 566
C ++ ++ L D L E ++ + + + +A + A++YL+ +
Sbjct: 91 CTREPPFYIITEFMTYGNLLDYLR--ECNRQEVNAVVLLYMATQISSAMEYLE---KKNF 145
Query: 567 VHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPE-FESGSYSC 625
+H + + N L+ E +V+V+D GL+ L+ +G T G APE +S
Sbjct: 146 IHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSI 204
Query: 626 QSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDGAYL 684
+SDV++ GV++ E+ T G PY P + D+ + +++
Sbjct: 205 KSDVWAFGVLLWEIATYGMSPY----------------PGI-DLSQVYELLEKDYRMERP 247
Query: 685 AKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI 720
+ +++ C QW P RP +EI Q M
Sbjct: 248 EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 283
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 123/276 (44%), Gaps = 29/276 (10%)
Query: 448 IGEGLLGSVYKAELPGGKL-LAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGY 506
+G G G VY+ L +AVK L + EEFL+ A+ + ++H N+V+L+G
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV---EEFLKEAAVMKEIKHPNLVQLLGV 79
Query: 507 CNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPI 566
C ++ ++ L D L E ++ + + + +A + A++YL+ +
Sbjct: 80 CTREPPFYIITEFMTYGNLLDYLR--ECNRQEVNAVVLLYMATQISSAMEYLE---KKNF 134
Query: 567 VHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPE-FESGSYSC 625
+H + + N L+ E +V+V+D GL+ L+ +G T G APE +S
Sbjct: 135 IHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSI 193
Query: 626 QSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDGAYL 684
+SDV++ GV++ E+ T G PY P + D+ + +++
Sbjct: 194 KSDVWAFGVLLWEIATYGMSPY----------------PGI-DLSQVYELLEKDYRMERP 236
Query: 685 AKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI 720
+ +++ C QW P RP +EI Q M
Sbjct: 237 EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 272
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 123/276 (44%), Gaps = 29/276 (10%)
Query: 448 IGEGLLGSVYKAELPGGKL-LAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGY 506
+G G G VY+ L +AVK L + EEFL+ A+ + ++H N+V+L+G
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV---EEFLKEAAVMKEIKHPNLVQLLGV 79
Query: 507 CNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPI 566
C ++ ++ L D L E ++ + + + +A + A++YL+ +
Sbjct: 80 CTREPPFYIITEFMTYGNLLDYLR--ECNRQEVNAVVLLYMATQISSAMEYLE---KKNF 134
Query: 567 VHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPE-FESGSYSC 625
+H + + N L+ E +V+V+D GL+ L+ +G T G APE +S
Sbjct: 135 IHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAPAGAKFPIKWTAPESLAYNKFSI 193
Query: 626 QSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDGAYL 684
+SDV++ GV++ E+ T G PY P + D+ + +++
Sbjct: 194 KSDVWAFGVLLWEIATYGMSPY----------------PGI-DLSQVYELLEKDYRMERP 236
Query: 685 AKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI 720
+ +++ C QW P RP +EI Q M
Sbjct: 237 EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 272
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 123/276 (44%), Gaps = 29/276 (10%)
Query: 448 IGEGLLGSVYKAELPGGKL-LAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGY 506
+G G G VY+ L +AVK L + EEFL+ A+ + ++H N+V+L+G
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV---EEFLKEAAVMKEIKHPNLVQLLGV 79
Query: 507 CNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPI 566
C ++ ++ L D L E ++ + + + +A + A++YL+ +
Sbjct: 80 CTREPPFYIITEFMTYGNLLDYLR--ECNRQEVNAVVLLYMATQISSAMEYLE---KKNF 134
Query: 567 VHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPE-FESGSYSC 625
+H + + N L+ E +V+V+D GL+ L+ +G T G APE +S
Sbjct: 135 IHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSI 193
Query: 626 QSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDGAYL 684
+SDV++ GV++ E+ T G PY P + D+ + +++
Sbjct: 194 KSDVWAFGVLLWEIATYGMSPY----------------PGI-DLSQVYELLEKDYRMERP 236
Query: 685 AKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI 720
+ +++ C QW P RP +EI Q M
Sbjct: 237 EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 272
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 101/203 (49%), Gaps = 16/203 (7%)
Query: 448 IGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYC 507
+G+G G V+ G +A+K L + E FL+ A + +LRH +V+L
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT---MSPEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 508 NEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIV 567
+E ++++ +Y +L D L E K + +A A + Y++ + V
Sbjct: 83 SEEPIYIVI-EYMSKGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYVERMN---YV 136
Query: 568 HGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELS--EGLLTAHGSGAPEFE-SGSYS 624
H + +++NIL+ E L+ +V+D GLA L+ NE + +G APE G ++
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRFT 193
Query: 625 CQSDVYSLGVVMLELLT-GRKPY 646
+SDV+S G+++ EL T GR PY
Sbjct: 194 IKSDVWSFGILLTELTTKGRVPY 216
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 101/203 (49%), Gaps = 16/203 (7%)
Query: 448 IGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYC 507
+G+G G V+ G +A+K L + E FL+ A + +LRH +V+L
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT---MSPEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 508 NEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIV 567
+E ++++ +Y +L D L E K + +A A + Y++ + V
Sbjct: 83 SEEPIYIVI-EYMSKGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYVERMN---YV 136
Query: 568 HGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELS--EGLLTAHGSGAPEFE-SGSYS 624
H + +++NIL+ E L+ +V+D GLA L+ NE + +G APE G ++
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLI---EDNEXTARQGAKFPIKWTAPEAALYGRFT 193
Query: 625 CQSDVYSLGVVMLELLT-GRKPY 646
+SDV+S G+++ EL T GR PY
Sbjct: 194 IKSDVWSFGILLTELTTKGRVPY 216
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 100/203 (49%), Gaps = 16/203 (7%)
Query: 448 IGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYC 507
+G+G G V+ G +A+K L + E FL+ A + +LRH +V+L
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT---MSPEAFLQEAQVMKKLRHEKLVQLYAVV 331
Query: 508 NEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIV 567
+E ++ V +Y +L D L E K + +A A + Y++ + V
Sbjct: 332 SEEPIYI-VTEYMSKGSLLDFLKG--ETGKYLRLPQLVDMAAQIASGMAYVERMN---YV 385
Query: 568 HGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELS--EGLLTAHGSGAPEFE-SGSYS 624
H + +++NIL+ E L+ +V+D GLA L+ NE + +G APE G ++
Sbjct: 386 HRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRFT 442
Query: 625 CQSDVYSLGVVMLELLT-GRKPY 646
+SDV+S G+++ EL T GR PY
Sbjct: 443 IKSDVWSFGILLTELTTKGRVPY 465
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 100/203 (49%), Gaps = 16/203 (7%)
Query: 448 IGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYC 507
+G+G G V+ G +A+K L + E FL+ A + +LRH +V+L
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT---MSPEAFLQEAQVMKKLRHEKLVQLYAVV 75
Query: 508 NEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIV 567
+E ++ V +Y +L D L E K + +A A + Y++ + V
Sbjct: 76 SEEPIYI-VTEYMSKGSLLDFLKG--ETGKYLRLPQLVDMAAQIASGMAYVERMN---YV 129
Query: 568 HGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELS--EGLLTAHGSGAPEFE-SGSYS 624
H + +++NIL+ E L+ +V+D GLA L+ NE + +G APE G ++
Sbjct: 130 HRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRFT 186
Query: 625 CQSDVYSLGVVMLELLT-GRKPY 646
+SDV+S G+++ EL T GR PY
Sbjct: 187 IKSDVWSFGILLTELTTKGRVPY 209
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 122/289 (42%), Gaps = 55/289 (19%)
Query: 445 GNFIGEGLLGSVYKAELPG-GKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVEL 503
G IG G G V+ L L+AVK T+ +FL+ A + + H NIV L
Sbjct: 119 GEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPP-DLKAKFLQEARILKQYSHPNIVRL 177
Query: 504 IGYCNEHGQHLLVYDY--GGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEV 561
IG C + +V + GG D L + +++ AA ++YL+
Sbjct: 178 IGVCTQKQPIYIVMELVQGG-----DFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESK 232
Query: 562 CEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGS-------- 613
C +H + + N L+ EK ++++SD G+ + E ++G+ A G
Sbjct: 233 C---CIHRDLAARNCLVTEKNVLKISDFGM--------SREEADGVXAASGGLRQVPVKW 281
Query: 614 GAPE-FESGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLV----RWAIPRLHD 667
APE G YS +SDV+S G+++ E + G PY + + V R P L
Sbjct: 282 TAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLPCPELCP 341
Query: 668 IDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDL 716
DA+ R+++ +C +EPG RP S I Q+L
Sbjct: 342 -DAVFRLME--------------------QCWAYEPGQRPSFSTIYQEL 369
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 122/289 (42%), Gaps = 55/289 (19%)
Query: 445 GNFIGEGLLGSVYKAELPG-GKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVEL 503
G IG G G V+ L L+AVK T+ +FL+ A + + H NIV L
Sbjct: 119 GEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPP-DLKAKFLQEARILKQYSHPNIVRL 177
Query: 504 IGYCNEHGQHLLVYDY--GGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEV 561
IG C + +V + GG D L + +++ AA ++YL+
Sbjct: 178 IGVCTQKQPIYIVMELVQGG-----DFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESK 232
Query: 562 CEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGS-------- 613
C +H + + N L+ EK ++++SD G+ + E ++G+ A G
Sbjct: 233 C---CIHRDLAARNCLVTEKNVLKISDFGM--------SREEADGVYAASGGLRQVPVKW 281
Query: 614 GAPE-FESGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLV----RWAIPRLHD 667
APE G YS +SDV+S G+++ E + G PY + + V R P L
Sbjct: 282 TAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLPCPELCP 341
Query: 668 IDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDL 716
DA+ R+++ +C +EPG RP S I Q+L
Sbjct: 342 -DAVFRLME--------------------QCWAYEPGQRPSFSTIYQEL 369
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 100/203 (49%), Gaps = 16/203 (7%)
Query: 448 IGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYC 507
+G+G G V+ G +A+K L + E FL+ A + +LRH +V+L
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT---MSPEAFLQEAQVMKKLRHEKLVQLYAVV 71
Query: 508 NEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIV 567
+E ++ V +Y +L D L E K + +A A + Y++ + V
Sbjct: 72 SEEPIYI-VTEYMSKGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYVERMN---YV 125
Query: 568 HGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELS--EGLLTAHGSGAPEFE-SGSYS 624
H + +++NIL+ E L+ +V+D GLA L+ NE + +G APE G ++
Sbjct: 126 HRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRFT 182
Query: 625 CQSDVYSLGVVMLELLT-GRKPY 646
+SDV+S G+++ EL T GR PY
Sbjct: 183 IKSDVWSFGILLTELTTKGRVPY 205
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 100/203 (49%), Gaps = 16/203 (7%)
Query: 448 IGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYC 507
+G+G G V+ G +A+K L + E FL+ A + +LRH +V+L
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT---MSPEAFLQEAQVMKKLRHEKLVQLYAVV 73
Query: 508 NEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIV 567
+E ++ V +Y +L D L E K + +A A + Y++ + V
Sbjct: 74 SEEPIYI-VTEYMSKGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYVERMN---YV 127
Query: 568 HGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELS--EGLLTAHGSGAPEFE-SGSYS 624
H + +++NIL+ E L+ +V+D GLA L+ NE + +G APE G ++
Sbjct: 128 HRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRFT 184
Query: 625 CQSDVYSLGVVMLELLT-GRKPY 646
+SDV+S G+++ EL T GR PY
Sbjct: 185 IKSDVWSFGILLTELTTKGRVPY 207
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 100/203 (49%), Gaps = 16/203 (7%)
Query: 448 IGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYC 507
+G+G G V+ G +A+K L + E FL+ A + +LRH +V+L
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT---MSPEAFLQEAQVMKKLRHEKLVQLYAVV 248
Query: 508 NEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIV 567
+E ++ V +Y +L D L E K + +A A + Y++ + V
Sbjct: 249 SEEPIYI-VTEYMSKGSLLDFLKG--ETGKYLRLPQLVDMAAQIASGMAYVERM---NYV 302
Query: 568 HGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELS--EGLLTAHGSGAPEFE-SGSYS 624
H + +++NIL+ E L+ +V+D GLA L+ NE + +G APE G ++
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRFT 359
Query: 625 CQSDVYSLGVVMLELLT-GRKPY 646
+SDV+S G+++ EL T GR PY
Sbjct: 360 IKSDVWSFGILLTELTTKGRVPY 382
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 100/203 (49%), Gaps = 16/203 (7%)
Query: 448 IGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYC 507
+G+G G V+ G +A+K L + E FL+ A + +LRH +V+L
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT---MSPEAFLQEAQVMKKLRHEKLVQLYAVV 248
Query: 508 NEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIV 567
+E ++ V +Y +L D L E K + +A A + Y++ + V
Sbjct: 249 SEEPIYI-VTEYMSKGSLLDFLKG--ETGKYLRLPQLVDMAAQIASGMAYVERM---NYV 302
Query: 568 HGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELS--EGLLTAHGSGAPEFE-SGSYS 624
H + +++NIL+ E L+ +V+D GLA L+ NE + +G APE G ++
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRFT 359
Query: 625 CQSDVYSLGVVMLELLT-GRKPY 646
+SDV+S G+++ EL T GR PY
Sbjct: 360 IKSDVWSFGILLTELTTKGRVPY 382
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 100/203 (49%), Gaps = 16/203 (7%)
Query: 448 IGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYC 507
+G+G G V+ G +A+K L + E FL+ A + +LRH +V+L
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT---MSPEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 508 NEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIV 567
+E ++ V +Y +L D L E K + +A A + Y++ + V
Sbjct: 83 SEEPIYI-VTEYMSKGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYVERMN---YV 136
Query: 568 HGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELS--EGLLTAHGSGAPEFE-SGSYS 624
H + +++NIL+ E L+ +V+D GLA L+ NE + +G APE G ++
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRFT 193
Query: 625 CQSDVYSLGVVMLELLT-GRKPY 646
+SDV+S G+++ EL T GR PY
Sbjct: 194 IKSDVWSFGILLTELTTKGRVPY 216
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 115/270 (42%), Gaps = 21/270 (7%)
Query: 448 IGEGLLGSVYKAE-LPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGY 506
+G G G V K +P G+++AVK++ TV+ ++ ++L ++ + V G
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 118
Query: 507 CNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPI 566
G + + + +L + + +I ++A+ +AL++L +
Sbjct: 119 LFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS--V 175
Query: 567 VHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGL--LTAHGSGAPEFESGSYS 624
+H + K SN+L++ V++ D G++ L + G A PE YS
Sbjct: 176 IHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQKGYS 235
Query: 625 CQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDGAYL 684
+SD++SLG+ M+EL R PYD W P L ++V+
Sbjct: 236 VKSDIWSLGITMIELAILRFPYD-----------SWGTP----FQQLKQVVEEPSPQLPA 280
Query: 685 AKSLSRFADIISRCVQWEPGFRPPMSEIVQ 714
K + F D S+C++ RP E++Q
Sbjct: 281 DKFSAEFVDFTSQCLKKNSKERPTYPELMQ 310
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 116/270 (42%), Gaps = 21/270 (7%)
Query: 448 IGEGLLGSVYKAE-LPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGY 506
+G G G V K +P G+++AVK++ TV+ ++ ++L ++ + V G
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 74
Query: 507 CNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPI 566
G + + + +L + + +I ++A+ +AL++L +
Sbjct: 75 LFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS--V 131
Query: 567 VHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGL--LTAHGSGAPEFESGSYS 624
+H + K SN+L++ V++ D G++ L ++ G A PE YS
Sbjct: 132 IHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPELNQKGYS 191
Query: 625 CQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDGAYL 684
+SD++SLG+ M+EL R PYD W P L ++V+
Sbjct: 192 VKSDIWSLGITMIELAILRFPYD-----------SWGTP----FQQLKQVVEEPSPQLPA 236
Query: 685 AKSLSRFADIISRCVQWEPGFRPPMSEIVQ 714
K + F D S+C++ RP E++Q
Sbjct: 237 DKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 100/203 (49%), Gaps = 16/203 (7%)
Query: 448 IGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYC 507
+G+G G V+ G +A+K L + E FL+ A + +LRH +V+L
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT---MSPEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 508 NEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIV 567
+E ++ V +Y +L D L E K + +A A + Y++ + V
Sbjct: 83 SEEPIYI-VCEYMSKGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYVERM---NYV 136
Query: 568 HGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELS--EGLLTAHGSGAPEFE-SGSYS 624
H + +++NIL+ E L+ +V+D GLA L+ NE + +G APE G ++
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRFT 193
Query: 625 CQSDVYSLGVVMLELLT-GRKPY 646
+SDV+S G+++ EL T GR PY
Sbjct: 194 IKSDVWSFGILLTELTTKGRVPY 216
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 99/203 (48%), Gaps = 16/203 (7%)
Query: 448 IGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYC 507
+G+G G V+ G +A+K L + E FL+ A + +LRH +V+L
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT---MSPEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 508 NEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIV 567
+E ++ V +Y L D L E K + +A A + Y++ + V
Sbjct: 83 SEEPIYI-VMEYMSKGCLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYVERM---NYV 136
Query: 568 HGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELS--EGLLTAHGSGAPEFE-SGSYS 624
H + +++NIL+ E L+ +V+D GLA L+ NE + +G APE G ++
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRFT 193
Query: 625 CQSDVYSLGVVMLELLT-GRKPY 646
+SDV+S G+++ EL T GR PY
Sbjct: 194 IKSDVWSFGILLTELTTKGRVPY 216
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 132/283 (46%), Gaps = 57/283 (20%)
Query: 442 FSEGNFIGEGLLGSVYKA-ELPGGKLLAVKKLSNTVSQRQTDEEFLELASTI---SRLRH 497
FS+ IG G G+VY A ++ +++A+KK+S S +Q++E++ ++ + +LRH
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMS--YSGKQSNEKWQDIIKEVRFLQKLRH 113
Query: 498 GNIVELIG-YCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIR-VALGAARAL 555
N ++ G Y EH L++ G+ + DLL E HKK + I V GA + L
Sbjct: 114 PNTIQYRGCYLREHTAWLVMEYCLGSAS--DLL----EVHKKPLQEVEIAAVTHGALQGL 167
Query: 556 QYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLL-----FSGSTNELSEGLLTA 610
YL ++H + K+ NILL E +V++ D G A ++ F G+ ++ ++ A
Sbjct: 168 AYLHS---HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWMAPEVILA 224
Query: 611 HGSGAPEFESGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDA 670
+ G Y + DV+SLG+ +EL + P L +++A
Sbjct: 225 -------MDEGQYDGKVDVWSLGITCIELAERKPP-------------------LFNMNA 258
Query: 671 LSRMV------DPSLDGAYLAKSLSRFADIISRCVQWEPGFRP 707
+S + P+L + ++ F D C+Q P RP
Sbjct: 259 MSALYHIAQNESPALQSGHWSEYFRNFVD---SCLQKIPQDRP 298
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 101/234 (43%), Gaps = 35/234 (14%)
Query: 440 NSFSEGNFIGEGLLGSVYKAELPG--------GKLLAVKKLSNTVSQRQTDEEFLELAST 491
+ + G +GEG G V AE G +AVK L + +++ + E+
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 492 ISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIR------- 544
+H NI+ L+G C + G ++ +Y L + L + ++S++I
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 545 -----IRVALGAARALQYL-QEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLL--- 595
+ AR ++YL + C +H + + N+L+ E ++R++D GLA +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMRIADFGLARDINNI 210
Query: 596 --FSGSTNELSEGLLTAHGSGAPEFESGSYSCQSDVYSLGVVMLELLT-GRKPY 646
+ +TN G L Y+ QSDV+S GV+M E+ T G PY
Sbjct: 211 DYYKKTTN----GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 100/203 (49%), Gaps = 16/203 (7%)
Query: 448 IGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYC 507
+G+G G V+ G +A+K L + E FL+ A + +LRH +V+L
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT---MSPEAFLQEAQVMKKLRHEKLVQLYAVV 248
Query: 508 NEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIV 567
+E ++ V +Y +L D L E K + +A A + Y++ + V
Sbjct: 249 SEEPIYI-VGEYMSKGSLLDFLKG--ETGKYLRLPQLVDMAAQIASGMAYVERM---NYV 302
Query: 568 HGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELS--EGLLTAHGSGAPEFE-SGSYS 624
H + +++NIL+ E L+ +V+D GLA L+ NE + +G APE G ++
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRFT 359
Query: 625 CQSDVYSLGVVMLELLT-GRKPY 646
+SDV+S G+++ EL T GR PY
Sbjct: 360 IKSDVWSFGILLTELTTKGRVPY 382
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 126/277 (45%), Gaps = 31/277 (11%)
Query: 448 IGEGLLGSVYKAELPGGKL-LAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGY 506
+G G G VY L +AVK L + EEFL+ A+ + ++H N+V+L+G
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEV---EEFLKEAAVMKEIKHPNLVQLLGV 96
Query: 507 CNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPI 566
C +V +Y L D L E ++ + + + +A + A++YL+ +
Sbjct: 97 CTLEPPFYIVTEYMPYGNLLDYLR--ECNREEVTAVVLLYMATQISSAMEYLE---KKNF 151
Query: 567 VHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPE-FESGSYSC 625
+H + + N L+ E +V+V+D GL+ L+ +G T G APE ++S
Sbjct: 152 IHRDLAARNCLVGENHVVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNTFSI 210
Query: 626 QSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHD-IDALSRMVDPSLDGAY 683
+SDV++ GV++ E+ T G PY P + S +++D ++ RM P
Sbjct: 211 KSDVWAFGVLLWEIATYGMSPY----PGIDLS-------QVYDLLEKGYRMEQPE----- 254
Query: 684 LAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI 720
+ +++ C +W P RP +E Q M
Sbjct: 255 --GCPPKVYELMRACWKWSPADRPSFAETHQAFETMF 289
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 100/208 (48%), Gaps = 16/208 (7%)
Query: 448 IGEGLLGSVYKAEL--PGGK--LLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVEL 503
IG G G V + L PG K +A+K L ++RQ EFL AS + + H NI+ L
Sbjct: 24 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQR-REFLSEASIMGQFEHPNIIRL 82
Query: 504 IGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCE 563
G +++ ++ N L L ++ +F+ + + G A ++YL E+
Sbjct: 83 EGVVTNSMPVMILTEFMENGALDSFLRLND---GQFTVIQLVGMLRGIASGMRYLAEMS- 138
Query: 564 PPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTN--ELSE--GLLTAHGSGAPEFE 619
VH + + NIL++ L+ +VSD GL+ L S++ E S G + +
Sbjct: 139 --YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIA 196
Query: 620 SGSYSCQSDVYSLGVVMLELLT-GRKPY 646
++ SD +S G+VM E+++ G +PY
Sbjct: 197 FRKFTSASDAWSYGIVMWEVMSFGERPY 224
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 100/203 (49%), Gaps = 16/203 (7%)
Query: 448 IGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYC 507
+G+G G V+ G +A+K L + E FL+ A + ++RH +V+L
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT---MSPEAFLQEAQVMKKIRHEKLVQLYAVV 82
Query: 508 NEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIV 567
+E ++ V +Y +L D L E K + +A A + Y++ + V
Sbjct: 83 SEEPIYI-VTEYMSKGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYVERMN---YV 136
Query: 568 HGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELS--EGLLTAHGSGAPEFE-SGSYS 624
H + +++NIL+ E L+ +V+D GLA L+ NE + +G APE G ++
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRFT 193
Query: 625 CQSDVYSLGVVMLELLT-GRKPY 646
+SDV+S G+++ EL T GR PY
Sbjct: 194 IKSDVWSFGILLTELTTKGRVPY 216
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 101/203 (49%), Gaps = 16/203 (7%)
Query: 448 IGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYC 507
+G+G G V+ G +A+K L + E FL+ A + +LRH +V+L
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT---MSPEAFLQEAQVMKKLRHEKLVQLYAVV 79
Query: 508 NEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIV 567
+E ++ V +Y +L D L + + + + + + + A Y++ + V
Sbjct: 80 SEEPIYI-VTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMA--YVERMN---YV 133
Query: 568 HGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELS--EGLLTAHGSGAPEFE-SGSYS 624
H + +++NIL+ E L+ +V+D GLA L+ NE + +G APE G ++
Sbjct: 134 HRDLRAANILVGENLVCKVADFGLARLI---EDNEWTARQGAKFPIKWTAPEAALYGRFT 190
Query: 625 CQSDVYSLGVVMLELLT-GRKPY 646
+SDV+S G+++ EL T GR PY
Sbjct: 191 IKSDVWSFGILLTELTTKGRVPY 213
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 101/203 (49%), Gaps = 16/203 (7%)
Query: 448 IGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYC 507
+G G G V+ G +A+K L + E FLE A + +L+H +V+L
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKPGT---MSPESFLEEAQIMKKLKHDKLVQLYAVV 73
Query: 508 NEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIV 567
+E ++ V +Y +L D L E K N+ + +A A + Y++ + +
Sbjct: 74 SEEPIYI-VTEYMNKGSLLDFLKDGEGRALKLP-NL-VDMAAQVAAGMAYIERMN---YI 127
Query: 568 HGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELS--EGLLTAHGSGAPEFE-SGSYS 624
H + +S+NIL+ LI +++D GLA L+ NE + +G APE G ++
Sbjct: 128 HRDLRSANILVGNGLICKIADFGLARLI---EDNEXTARQGAKFPIKWTAPEAALYGRFT 184
Query: 625 CQSDVYSLGVVMLELLT-GRKPY 646
+SDV+S G+++ EL+T GR PY
Sbjct: 185 IKSDVWSFGILLTELVTKGRVPY 207
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 99/203 (48%), Gaps = 16/203 (7%)
Query: 448 IGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYC 507
+G+G G V+ G +A+K L + E FL+ A + +LRH +V+L
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT---MSPEAFLQEAQVMKKLRHEKLVQLYAVV 72
Query: 508 NEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIV 567
+E +V +Y +L D L E K + +A A + Y++ + V
Sbjct: 73 SEE-PIXIVTEYMSKGSLLDFLKG--ETGKYLRLPQLVDMAAQIASGMAYVERMN---YV 126
Query: 568 HGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELS--EGLLTAHGSGAPEFE-SGSYS 624
H + +++NIL+ E L+ +V+D GLA L+ NE + +G APE G ++
Sbjct: 127 HRDLRAANILVGENLVCKVADFGLARLI---EDNEXTARQGAKFPIKWTAPEAALYGRFT 183
Query: 625 CQSDVYSLGVVMLELLT-GRKPY 646
+SDV+S G+++ EL T GR PY
Sbjct: 184 IKSDVWSFGILLTELTTKGRVPY 206
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 99/203 (48%), Gaps = 16/203 (7%)
Query: 448 IGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYC 507
+G+G G V+ G +A+K L + E FL+ A + +LRH +V+L
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT---MSPEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 508 NEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIV 567
+E ++ V +Y L D L E K + +A A + Y++ + V
Sbjct: 83 SEEPIYI-VTEYMSKGCLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYVERM---NYV 136
Query: 568 HGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELS--EGLLTAHGSGAPEFE-SGSYS 624
H + +++NIL+ E L+ +V+D GLA L+ NE + +G APE G ++
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRFT 193
Query: 625 CQSDVYSLGVVMLELLT-GRKPY 646
+SDV+S G+++ EL T GR PY
Sbjct: 194 IKSDVWSFGILLTELTTKGRVPY 216
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 101/203 (49%), Gaps = 16/203 (7%)
Query: 448 IGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYC 507
+G+G G V+ G +A+K L + E FL+ A + +LRH +V+L
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT---MSPEAFLQEAQVMKKLRHEKLVQLYAVV 79
Query: 508 NEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIV 567
+E ++ V +Y +L D L + + + + + + + A Y++ + V
Sbjct: 80 SEEPIYI-VTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMA--YVERMN---YV 133
Query: 568 HGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELS--EGLLTAHGSGAPEFE-SGSYS 624
H + +++NIL+ E L+ +V+D GLA L+ NE + +G APE G ++
Sbjct: 134 HRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRFT 190
Query: 625 CQSDVYSLGVVMLELLT-GRKPY 646
+SDV+S G+++ EL T GR PY
Sbjct: 191 IKSDVWSFGILLTELTTKGRVPY 213
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 132/288 (45%), Gaps = 45/288 (15%)
Query: 448 IGEGLLGSVYKA--ELPGGK--LLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVEL 503
IG G G V +LPG + +A+K L + +++Q +FL AS + + H N++ L
Sbjct: 41 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQR-RDFLSEASIMGQFDHPNVIHL 99
Query: 504 IGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCE 563
G + +++ ++ N +L L ++ +F+ + + G A ++YL ++
Sbjct: 100 EGVVTKSTPVMIITEFMENGSLDSFLRQND---GQFTVIQLVGMLRGIAAGMKYLADMN- 155
Query: 564 PPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG-------AP 616
VH + + NIL++ L+ +VSD GL+ L ++ S+ T+ G AP
Sbjct: 156 --YVHRDLAARNILVNSNLVCKVSDFGLSRFL----EDDTSDPTYTSALGGKIPIRWTAP 209
Query: 617 E-FESGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSR- 673
E + ++ SDV+S G+VM E+++ G +PY W + I+A+ +
Sbjct: 210 EAIQYRKFTSASDVWSYGIVMWEVMSYGERPY-------------WDMTNQDVINAIEQD 256
Query: 674 -MVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI 720
+ P +D S ++ C Q + RP +IV L MI
Sbjct: 257 YRLPPPMDCP------SALHQLMLDCWQKDRNHRPKFGQIVNTLDKMI 298
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 98/208 (47%), Gaps = 16/208 (7%)
Query: 448 IGEGLLGSVYKAEL--PGGK--LLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVEL 503
IG G G V + L PG K +A+K L ++RQ EFL AS + + H NI+ L
Sbjct: 22 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQR-REFLSEASIMGQFEHPNIIRL 80
Query: 504 IGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCE 563
G +++ ++ N L L ++ +F+ + + G A ++YL E+
Sbjct: 81 EGVVTNSMPVMILTEFMENGALDSFLRLND---GQFTVIQLVGMLRGIASGMRYLAEMS- 136
Query: 564 PPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSE----GLLTAHGSGAPEFE 619
VH + + NIL++ L+ +VSD GL+ L S++ G + +
Sbjct: 137 --YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIA 194
Query: 620 SGSYSCQSDVYSLGVVMLELLT-GRKPY 646
++ SD +S G+VM E+++ G +PY
Sbjct: 195 FRKFTSASDAWSYGIVMWEVMSFGERPY 222
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 132/283 (46%), Gaps = 57/283 (20%)
Query: 442 FSEGNFIGEGLLGSVYKA-ELPGGKLLAVKKLSNTVSQRQTDEEFLELASTI---SRLRH 497
FS+ IG G G+VY A ++ +++A+KK+S S +Q++E++ ++ + +LRH
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMS--YSGKQSNEKWQDIIKEVRFLQKLRH 74
Query: 498 GNIVELIG-YCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIR-VALGAARAL 555
N ++ G Y EH L++ G+ + DLL E HKK + I V GA + L
Sbjct: 75 PNTIQYRGCYLREHTAWLVMEYCLGSAS--DLL----EVHKKPLQEVEIAAVTHGALQGL 128
Query: 556 QYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLL-----FSGSTNELSEGLLTA 610
YL ++H + K+ NILL E +V++ D G A ++ F G+ ++ ++ A
Sbjct: 129 AYLHS---HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWMAPEVILA 185
Query: 611 HGSGAPEFESGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDA 670
+ G Y + DV+SLG+ +EL + P L +++A
Sbjct: 186 -------MDEGQYDGKVDVWSLGITCIELAERKPP-------------------LFNMNA 219
Query: 671 LSRMV------DPSLDGAYLAKSLSRFADIISRCVQWEPGFRP 707
+S + P+L + ++ F D C+Q P RP
Sbjct: 220 MSALYHIAQNESPALQSGHWSEYFRNFVD---SCLQKIPQDRP 259
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 101/234 (43%), Gaps = 35/234 (14%)
Query: 440 NSFSEGNFIGEGLLGSVYKAELPG--------GKLLAVKKLSNTVSQRQTDEEFLELAST 491
+ + G +GEG G V AE G +AVK L + +++ + E+
Sbjct: 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 140
Query: 492 ISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIR------- 544
+H NI+ L+G C + G ++ +Y L + L + ++S++I
Sbjct: 141 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 200
Query: 545 -----IRVALGAARALQYL-QEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLL--- 595
+ AR ++YL + C +H + + N+L+ E +++++D GLA +
Sbjct: 201 TFKDLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINNI 256
Query: 596 --FSGSTNELSEGLLTAHGSGAPEFESGSYSCQSDVYSLGVVMLELLT-GRKPY 646
+ +TN G L Y+ QSDV+S GV+M E+ T G PY
Sbjct: 257 DYYKKTTN----GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 306
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 99/203 (48%), Gaps = 16/203 (7%)
Query: 448 IGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYC 507
+G+G G V+ G +A+K L + E FL+ A + +LRH +V+L
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT---MSPEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 508 NEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIV 567
+E ++ V +Y +L D L E K + +A A + Y++ + V
Sbjct: 83 SEEPIYI-VTEYMSKGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYVERMN---YV 136
Query: 568 HGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELS--EGLLTAHGSGAPEFE-SGSYS 624
H + ++NIL+ E L+ +V+D GLA L+ NE + +G APE G ++
Sbjct: 137 HRDLAAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRFT 193
Query: 625 CQSDVYSLGVVMLELLT-GRKPY 646
+SDV+S G+++ EL T GR PY
Sbjct: 194 IKSDVWSFGILLTELTTKGRVPY 216
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 123/304 (40%), Gaps = 52/304 (17%)
Query: 440 NSFSEGNFIGEGLLGSVYKAELPG--------GKLLAVKKLSNTVSQRQTDEEFLELAST 491
+ + G +GEG G V AE G +AVK L + +++ + E+
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 492 ISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIR------- 544
+H NI+ L+G C + G ++ +Y L + L + ++S++I
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 545 -----IRVALGAARALQYL-QEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLL--- 595
+ AR ++YL + C +H + + N+L+ E +++++D GLA +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 596 --FSGSTNELSEGLLTAHGSGAPEFESGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPR 652
+ +TN G L Y+ QSDV+S GV+M E+ T G PY
Sbjct: 211 DYYKNTTN----GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP----- 261
Query: 653 GEQSLVRWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEI 712
IP ++ L +++ A + ++ C P RP ++
Sbjct: 262 --------GIP----VEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQL 309
Query: 713 VQDL 716
V+DL
Sbjct: 310 VEDL 313
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 123/304 (40%), Gaps = 52/304 (17%)
Query: 440 NSFSEGNFIGEGLLGSVYKAELPG--------GKLLAVKKLSNTVSQRQTDEEFLELAST 491
+ + G +GEG G V AE G +AVK L + +++ + E+
Sbjct: 22 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 81
Query: 492 ISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIR------- 544
+H NI+ L+G C + G ++ +Y L + L + ++S++I
Sbjct: 82 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 141
Query: 545 -----IRVALGAARALQYL-QEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLL--- 595
+ AR ++YL + C +H + + N+L+ E +++++D GLA +
Sbjct: 142 TFKDLVSCTYQLARGMEYLASQKC----IHRDLTARNVLVTENNVMKIADFGLARDINNI 197
Query: 596 --FSGSTNELSEGLLTAHGSGAPEFESGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPR 652
+ +TN G L Y+ QSDV+S GV+M E+ T G PY
Sbjct: 198 DYYKKTTN----GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP----- 248
Query: 653 GEQSLVRWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEI 712
IP ++ L +++ A + ++ C P RP ++
Sbjct: 249 --------GIP----VEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQL 296
Query: 713 VQDL 716
V+DL
Sbjct: 297 VEDL 300
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 124/284 (43%), Gaps = 45/284 (15%)
Query: 448 IGEGLLGSVYK-AELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGY 506
IG G GSV K P G+++AVK++ +TV +++ + ++L + IV+ G
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGA 89
Query: 507 CNEHGQHLLVYDYGGNCTL-HDLLHSDEEAHKKFSWN---------IRIRVALGAARALQ 556
G +C + +L+ + + K+ ++ I ++ L +AL
Sbjct: 90 LFREG----------DCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALN 139
Query: 557 YLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGL--LTAHGSG 614
+L+E + I+H + K SNILLD +++ D G++ L G A
Sbjct: 140 HLKENLK--IIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERI 197
Query: 615 APEFESGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDI-DALSR 673
P Y +SDV+SLG+ + EL TGR PY P+ + + D L++
Sbjct: 198 DPSASRQGYDVRSDVWSLGITLYELATGRFPY----------------PKWNSVFDQLTQ 241
Query: 674 MVD---PSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQ 714
+V P L + + F + ++ C+ + RP E+++
Sbjct: 242 VVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK 285
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 123/304 (40%), Gaps = 52/304 (17%)
Query: 440 NSFSEGNFIGEGLLGSVYKAELPG--------GKLLAVKKLSNTVSQRQTDEEFLELAST 491
+ + G +GEG G V AE G +AVK L + +++ + E+
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 492 ISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIR------- 544
+H NI+ L+G C + G ++ +Y L + L + ++S++I
Sbjct: 95 KMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 545 -----IRVALGAARALQYL-QEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLL--- 595
+ AR ++YL + C +H + + N+L+ E +++++D GLA +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 596 --FSGSTNELSEGLLTAHGSGAPEFESGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPR 652
+ +TN G L Y+ QSDV+S GV+M E+ T G PY
Sbjct: 211 DYYKKTTN----GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP----- 261
Query: 653 GEQSLVRWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEI 712
IP ++ L +++ A + ++ C P RP ++
Sbjct: 262 --------GIP----VEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQL 309
Query: 713 VQDL 716
V+DL
Sbjct: 310 VEDL 313
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 123/304 (40%), Gaps = 52/304 (17%)
Query: 440 NSFSEGNFIGEGLLGSVYKAELPG--------GKLLAVKKLSNTVSQRQTDEEFLELAST 491
+ + G +GEG G V AE G +AVK L + +++ + E+
Sbjct: 24 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 83
Query: 492 ISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIR------- 544
+H NI+ L+G C + G ++ +Y L + L + ++S++I
Sbjct: 84 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 143
Query: 545 -----IRVALGAARALQYL-QEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLL--- 595
+ AR ++YL + C +H + + N+L+ E +++++D GLA +
Sbjct: 144 TFKDLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINNI 199
Query: 596 --FSGSTNELSEGLLTAHGSGAPEFESGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPR 652
+ +TN G L Y+ QSDV+S GV+M E+ T G PY
Sbjct: 200 DYYKKTTN----GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP----- 250
Query: 653 GEQSLVRWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEI 712
IP ++ L +++ A + ++ C P RP ++
Sbjct: 251 --------GIP----VEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQL 298
Query: 713 VQDL 716
V+DL
Sbjct: 299 VEDL 302
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 101/234 (43%), Gaps = 35/234 (14%)
Query: 440 NSFSEGNFIGEGLLGSVYKAELPG--------GKLLAVKKLSNTVSQRQTDEEFLELAST 491
+ + G +GEG G V AE G +AVK L + +++ + E+
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 492 ISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIR------- 544
+H NI+ L+G C + G ++ +Y L + L + ++S++I
Sbjct: 95 KMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 545 -----IRVALGAARALQYL-QEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLL--- 595
+ AR ++YL + C +H + + N+L+ E +++++D GLA +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 596 --FSGSTNELSEGLLTAHGSGAPEFESGSYSCQSDVYSLGVVMLELLT-GRKPY 646
+ +TN G L Y+ QSDV+S GV+M E+ T G PY
Sbjct: 211 DYYKKTTN----GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 123/304 (40%), Gaps = 52/304 (17%)
Query: 440 NSFSEGNFIGEGLLGSVYKAELPG--------GKLLAVKKLSNTVSQRQTDEEFLELAST 491
+ + G +GEG G V AE G +AVK L + +++ + E+
Sbjct: 27 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 86
Query: 492 ISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIR------- 544
+H NI+ L+G C + G ++ +Y L + L + ++S++I
Sbjct: 87 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 146
Query: 545 -----IRVALGAARALQYL-QEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLL--- 595
+ AR ++YL + C +H + + N+L+ E +++++D GLA +
Sbjct: 147 TFKDLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINNI 202
Query: 596 --FSGSTNELSEGLLTAHGSGAPEFESGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPR 652
+ +TN G L Y+ QSDV+S GV+M E+ T G PY
Sbjct: 203 DYYKKTTN----GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP----- 253
Query: 653 GEQSLVRWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEI 712
IP ++ L +++ A + ++ C P RP ++
Sbjct: 254 --------GIP----VEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQL 301
Query: 713 VQDL 716
V+DL
Sbjct: 302 VEDL 305
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 100/230 (43%), Gaps = 27/230 (11%)
Query: 440 NSFSEGNFIGEGLLGSVYKAELPG--------GKLLAVKKLSNTVSQRQTDEEFLELAST 491
+ + G +GEG G V AE G +AVK L + +++ + E+
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 492 ISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIR------- 544
+H NI+ L+G C + G ++ +Y L + L + ++S++I
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 545 -----IRVALGAARALQYL-QEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS- 597
+ AR ++YL + C +H + + N+L+ E +++++D GLA + +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 598 GSTNELSEGLLTAHGSGAPEFESGSYSCQSDVYSLGVVMLELLT-GRKPY 646
+ + G L Y+ QSDV+S GV+M E+ T G PY
Sbjct: 211 DXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 104/238 (43%), Gaps = 43/238 (18%)
Query: 440 NSFSEGNFIGEGLLGSVYKAELPG--------GKLLAVKKLSNTVSQRQTDEEFLELAST 491
+ + G +GEG G V AE G +AVK L + T+E+ +L S
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA----TEEDLSDLVSE 90
Query: 492 ISRLR----HGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIR--- 544
+ ++ H NI+ L+G C + G ++ +Y L + L + ++S++I
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 545 ---------IRVALGAARALQYL-QEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPL 594
+ AR ++YL + C +H + + N+L+ E +++++D GLA
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARD 206
Query: 595 L-----FSGSTNELSEGLLTAHGSGAPEFESGSYSCQSDVYSLGVVMLELLT-GRKPY 646
+ + +TN G L Y+ QSDV+S GV+M E+ T G PY
Sbjct: 207 INNIDYYKKTTN----GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 99/203 (48%), Gaps = 16/203 (7%)
Query: 448 IGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYC 507
+G+G G V+ G +A+K L + E FL+ A + +LRH +V+L
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGNMSPEAFLQEAQVMKKLRHEKLVQLYAVV 249
Query: 508 NEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIV 567
+E ++ V +Y +L D L E K + +A A + Y++ + V
Sbjct: 250 SEEPIYI-VTEYMSKGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYVERM---NYV 303
Query: 568 HGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELS--EGLLTAHGSGAPEFE-SGSYS 624
H + +++NIL+ E L+ +V+D GL L+ NE + +G APE G ++
Sbjct: 304 HRDLRAANILVGENLVCKVADFGLGRLI---EDNEYTARQGAKFPIKWTAPEAALYGRFT 360
Query: 625 CQSDVYSLGVVMLELLT-GRKPY 646
+SDV+S G+++ EL T GR PY
Sbjct: 361 IKSDVWSFGILLTELTTKGRVPY 383
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 132/312 (42%), Gaps = 65/312 (20%)
Query: 445 GNFIGEGLLGSVYKAEL------PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHG 498
G +GEG G V KA G +AVK L S + + L + + ++ H
Sbjct: 28 GKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSEL-RDLLSEFNVLKQVNHP 86
Query: 499 NIVELIGYCNEHGQHLLVYDYGGNCTLHDLL-----------------------HSDEEA 535
++++L G C++ G LL+ +Y +L L H DE A
Sbjct: 87 HVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERA 146
Query: 536 HK-----KFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCG 590
F+W I ++ +QYL E+ +VH + + NIL+ E +++SD G
Sbjct: 147 LTMGDLISFAWQI--------SQGMQYLAEMS---LVHRDLAARNILVAEGRKMKISDFG 195
Query: 591 LAPLLF-SGSTNELSEGLLTAHGSGAPEFESGSYSCQSDVYSLGVVMLELLT-GRKPYDR 648
L+ ++ S + S+G + Y+ QSDV+S GV++ E++T G PY
Sbjct: 196 LSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPG 255
Query: 649 SRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPP 708
P +L++ RM P ++ + R ++ +C + EP RP
Sbjct: 256 IPPERLFNLLKTG----------HRMERPD----NCSEEMYR---LMLQCWKQEPDKRPV 298
Query: 709 MSEIVQDLLCMI 720
++I +DL M+
Sbjct: 299 FADISKDLEKMM 310
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 131/288 (45%), Gaps = 45/288 (15%)
Query: 448 IGEGLLGSVYKA--ELPGGK--LLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVEL 503
IG G G V +LPG + +A+K L + +++Q +FL AS + + H N++ L
Sbjct: 15 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQR-RDFLSEASIMGQFDHPNVIHL 73
Query: 504 IGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCE 563
G + +++ ++ N +L L ++ +F+ + + G A ++YL ++
Sbjct: 74 EGVVTKSTPVMIITEFMENGSLDSFLRQND---GQFTVIQLVGMLRGIAAGMKYLADM-- 128
Query: 564 PPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG-------AP 616
VH + NIL++ L+ +VSD GL+ L ++ S+ T+ G AP
Sbjct: 129 -NYVHRALAARNILVNSNLVCKVSDFGLSRFL----EDDTSDPTYTSALGGKIPIRWTAP 183
Query: 617 E-FESGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSR- 673
E + ++ SDV+S G+VM E+++ G +PY W + I+A+ +
Sbjct: 184 EAIQYRKFTSASDVWSYGIVMWEVMSYGERPY-------------WDMTNQDVINAIEQD 230
Query: 674 -MVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI 720
+ P +D S ++ C Q + RP +IV L MI
Sbjct: 231 YRLPPPMDCP------SALHQLMLDCWQKDRNHRPKFGQIVNTLDKMI 272
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 132/312 (42%), Gaps = 65/312 (20%)
Query: 445 GNFIGEGLLGSVYKAEL------PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHG 498
G +GEG G V KA G +AVK L S + + L + + ++ H
Sbjct: 28 GKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSEL-RDLLSEFNVLKQVNHP 86
Query: 499 NIVELIGYCNEHGQHLLVYDYGGNCTLHDLL-----------------------HSDEEA 535
++++L G C++ G LL+ +Y +L L H DE A
Sbjct: 87 HVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERA 146
Query: 536 HK-----KFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCG 590
F+W I ++ +QYL E+ +VH + + NIL+ E +++SD G
Sbjct: 147 LTMGDLISFAWQI--------SQGMQYLAEM---KLVHRDLAARNILVAEGRKMKISDFG 195
Query: 591 LAPLLF-SGSTNELSEGLLTAHGSGAPEFESGSYSCQSDVYSLGVVMLELLT-GRKPYDR 648
L+ ++ S + S+G + Y+ QSDV+S GV++ E++T G PY
Sbjct: 196 LSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPG 255
Query: 649 SRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPP 708
P +L++ RM P ++ + R ++ +C + EP RP
Sbjct: 256 IPPERLFNLLKTG----------HRMERPD----NCSEEMYR---LMLQCWKQEPDKRPV 298
Query: 709 MSEIVQDLLCMI 720
++I +DL M+
Sbjct: 299 FADISKDLEKMM 310
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 122/304 (40%), Gaps = 52/304 (17%)
Query: 440 NSFSEGNFIGEGLLGSVYKAELPG--------GKLLAVKKLSNTVSQRQTDEEFLELAST 491
+ + G +GEG G V AE G +AVK L + +++ + E+
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 492 ISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIR------- 544
+H NI+ L+G C + G ++ Y L + L + ++S++I
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 545 -----IRVALGAARALQYL-QEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLL--- 595
+ AR ++YL + C +H + + N+L+ E +++++D GLA +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 596 --FSGSTNELSEGLLTAHGSGAPEFESGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPR 652
+ +TN G L Y+ QSDV+S GV+M E+ T G PY
Sbjct: 211 DYYKKTTN----GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP----- 261
Query: 653 GEQSLVRWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEI 712
IP ++ L +++ A + ++ C P RP ++
Sbjct: 262 --------GIP----VEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQL 309
Query: 713 VQDL 716
V+DL
Sbjct: 310 VEDL 313
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 132/312 (42%), Gaps = 65/312 (20%)
Query: 445 GNFIGEGLLGSVYKAEL------PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHG 498
G +GEG G V KA G +AVK L S + + L + + ++ H
Sbjct: 28 GKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSEL-RDLLSEFNVLKQVNHP 86
Query: 499 NIVELIGYCNEHGQHLLVYDYGGNCTLHDLL-----------------------HSDEEA 535
++++L G C++ G LL+ +Y +L L H DE A
Sbjct: 87 HVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERA 146
Query: 536 HK-----KFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCG 590
F+W I ++ +QYL E+ +VH + + NIL+ E +++SD G
Sbjct: 147 LTMGDLISFAWQI--------SQGMQYLAEM---KLVHRDLAARNILVAEGRKMKISDFG 195
Query: 591 LAPLLF-SGSTNELSEGLLTAHGSGAPEFESGSYSCQSDVYSLGVVMLELLT-GRKPYDR 648
L+ ++ S + S+G + Y+ QSDV+S GV++ E++T G PY
Sbjct: 196 LSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPG 255
Query: 649 SRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPP 708
P +L++ RM P ++ + R ++ +C + EP RP
Sbjct: 256 IPPERLFNLLKTG----------HRMERPD----NCSEEMYR---LMLQCWKQEPDKRPV 298
Query: 709 MSEIVQDLLCMI 720
++I +DL M+
Sbjct: 299 FADISKDLEKMM 310
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 98/208 (47%), Gaps = 14/208 (6%)
Query: 446 NFIGEGLLGSVYKAEL--PGGK--LLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIV 501
IG G G V L PG + +A+K L ++RQ +FL AS + + H NI+
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQR-RDFLSEASIMGQFDHPNII 113
Query: 502 ELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEV 561
L G ++V +Y N +L L + + +F+ + + G ++YL ++
Sbjct: 114 RLEGVVTRGRLAMIVTEYMENGSLDTFLRTHD---GQFTIMQLVGMLRGVGAGMRYLSDL 170
Query: 562 CEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS--GSTNELSEGLLTAHGSGAPEFE 619
VH + + N+L+D L+ +VSD GL+ +L + + G + +
Sbjct: 171 G---YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIA 227
Query: 620 SGSYSCQSDVYSLGVVMLELLT-GRKPY 646
++S SDV+S GVVM E+L G +PY
Sbjct: 228 FRTFSSASDVWSFGVVMWEVLAYGERPY 255
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 122/304 (40%), Gaps = 52/304 (17%)
Query: 440 NSFSEGNFIGEGLLGSVYKAELPG--------GKLLAVKKLSNTVSQRQTDEEFLELAST 491
+ + G +GEG G V AE G +AVK L + +++ + E+
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 492 ISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIR------- 544
+H NI+ L+G C + G ++ Y L + L + ++S++I
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 545 -----IRVALGAARALQYL-QEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLL--- 595
+ AR ++YL + C +H + + N+L+ E +++++D GLA +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 596 --FSGSTNELSEGLLTAHGSGAPEFESGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPR 652
+ +TN G L Y+ QSDV+S GV+M E+ T G PY
Sbjct: 211 DYYKKTTN----GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP----- 261
Query: 653 GEQSLVRWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEI 712
IP ++ L +++ A + ++ C P RP ++
Sbjct: 262 --------GIP----VEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQL 309
Query: 713 VQDL 716
V+DL
Sbjct: 310 VEDL 313
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 93/207 (44%), Gaps = 14/207 (6%)
Query: 448 IGEGLLGSVYKAEL---PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELI 504
IG G G VY L G K+ K N ++ +FL + H N++ L+
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 505 GYC-NEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCE 563
G C G L+V Y + L + + + E H ++ I L A+ ++YL
Sbjct: 97 GICLRSEGSPLVVLPYMKHGDLRNFIRN--ETHNPTVKDL-IGFGLQVAKGMKYL---AS 150
Query: 564 PPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSG---STNELSEGLLTAHGSGAPEFES 620
VH + + N +LDEK V+V+D GLA ++ S + + L ++
Sbjct: 151 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQT 210
Query: 621 GSYSCQSDVYSLGVVMLELLT-GRKPY 646
++ +SDV+S GV++ EL+T G PY
Sbjct: 211 QKFTTKSDVWSFGVLLWELMTRGAPPY 237
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 93/207 (44%), Gaps = 14/207 (6%)
Query: 448 IGEGLLGSVYKAEL---PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELI 504
IG G G VY L G K+ K N ++ +FL + H N++ L+
Sbjct: 56 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 115
Query: 505 GYC-NEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCE 563
G C G L+V Y + L + + + E H ++ I L A+ ++YL
Sbjct: 116 GICLRSEGSPLVVLPYMKHGDLRNFIRN--ETHNPTVKDL-IGFGLQVAKGMKYL---AS 169
Query: 564 PPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSG---STNELSEGLLTAHGSGAPEFES 620
VH + + N +LDEK V+V+D GLA ++ S + + L ++
Sbjct: 170 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 229
Query: 621 GSYSCQSDVYSLGVVMLELLT-GRKPY 646
++ +SDV+S GV++ EL+T G PY
Sbjct: 230 QKFTTKSDVWSFGVLLWELMTRGAPPY 256
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 93/207 (44%), Gaps = 14/207 (6%)
Query: 448 IGEGLLGSVYKAEL---PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELI 504
IG G G VY L G K+ K N ++ +FL + H N++ L+
Sbjct: 57 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 116
Query: 505 GYC-NEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCE 563
G C G L+V Y + L + + + E H ++ I L A+ ++YL
Sbjct: 117 GICLRSEGSPLVVLPYMKHGDLRNFIRN--ETHNPTVKDL-IGFGLQVAKGMKYL---AS 170
Query: 564 PPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSG---STNELSEGLLTAHGSGAPEFES 620
VH + + N +LDEK V+V+D GLA ++ S + + L ++
Sbjct: 171 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 230
Query: 621 GSYSCQSDVYSLGVVMLELLT-GRKPY 646
++ +SDV+S GV++ EL+T G PY
Sbjct: 231 QKFTTKSDVWSFGVLLWELMTRGAPPY 257
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 98/208 (47%), Gaps = 14/208 (6%)
Query: 446 NFIGEGLLGSVYKAEL--PGGK--LLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIV 501
IG G G V L PG + +A+K L ++RQ +FL AS + + H NI+
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQR-RDFLSEASIMGQFDHPNII 113
Query: 502 ELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEV 561
L G ++V +Y N +L L + + +F+ + + G ++YL ++
Sbjct: 114 RLEGVVTRGRLAMIVTEYMENGSLDTFLRTHD---GQFTIMQLVGMLRGVGAGMRYLSDL 170
Query: 562 CEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS--GSTNELSEGLLTAHGSGAPEFE 619
VH + + N+L+D L+ +VSD GL+ +L + + G + +
Sbjct: 171 G---YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIA 227
Query: 620 SGSYSCQSDVYSLGVVMLELLT-GRKPY 646
++S SDV+S GVVM E+L G +PY
Sbjct: 228 FRTFSSASDVWSFGVVMWEVLAYGERPY 255
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 93/207 (44%), Gaps = 14/207 (6%)
Query: 448 IGEGLLGSVYKAEL---PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELI 504
IG G G VY L G K+ K N ++ +FL + H N++ L+
Sbjct: 30 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 89
Query: 505 GYC-NEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCE 563
G C G L+V Y + L + + + E H ++ I L A+ ++YL
Sbjct: 90 GICLRSEGSPLVVLPYMKHGDLRNFIRN--ETHNPTVKDL-IGFGLQVAKGMKYL---AS 143
Query: 564 PPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSG---STNELSEGLLTAHGSGAPEFES 620
VH + + N +LDEK V+V+D GLA ++ S + + L ++
Sbjct: 144 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 203
Query: 621 GSYSCQSDVYSLGVVMLELLT-GRKPY 646
++ +SDV+S GV++ EL+T G PY
Sbjct: 204 QKFTTKSDVWSFGVLLWELMTRGAPPY 230
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 99/230 (43%), Gaps = 27/230 (11%)
Query: 440 NSFSEGNFIGEGLLGSVYKAELPG--------GKLLAVKKLSNTVSQRQTDEEFLELAST 491
+ + G +GEG G V AE G +AVK L + +++ + E+
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 492 ISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIR------- 544
+H NI+ L+G C + G ++ +Y L + L + + S++I
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQM 154
Query: 545 -----IRVALGAARALQYL-QEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS- 597
+ AR ++YL + C +H + + N+L+ E +++++D GLA + +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 598 GSTNELSEGLLTAHGSGAPEFESGSYSCQSDVYSLGVVMLELLT-GRKPY 646
+ + G L Y+ QSDV+S GV+M E+ T G PY
Sbjct: 211 DXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 93/207 (44%), Gaps = 14/207 (6%)
Query: 448 IGEGLLGSVYKAEL---PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELI 504
IG G G VY L G K+ K N ++ +FL + H N++ L+
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 505 GYC-NEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCE 563
G C G L+V Y + L + + + E H ++ I L A+ ++YL
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRN--ETHNPTVKDL-IGFGLQVAKGMKYL---AS 151
Query: 564 PPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSG---STNELSEGLLTAHGSGAPEFES 620
VH + + N +LDEK V+V+D GLA ++ S + + L ++
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 211
Query: 621 GSYSCQSDVYSLGVVMLELLT-GRKPY 646
++ +SDV+S GV++ EL+T G PY
Sbjct: 212 QKFTTKSDVWSFGVLLWELMTRGAPPY 238
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 93/207 (44%), Gaps = 14/207 (6%)
Query: 448 IGEGLLGSVYKAEL---PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELI 504
IG G G VY L G K+ K N ++ +FL + H N++ L+
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 505 GYC-NEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCE 563
G C G L+V Y + L + + + E H ++ I L A+ ++YL
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRN--ETHNPTVKDL-IGFGLQVAKGMKYL---AS 151
Query: 564 PPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSG---STNELSEGLLTAHGSGAPEFES 620
VH + + N +LDEK V+V+D GLA ++ S + + L ++
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 211
Query: 621 GSYSCQSDVYSLGVVMLELLT-GRKPY 646
++ +SDV+S GV++ EL+T G PY
Sbjct: 212 QKFTTKSDVWSFGVLLWELMTRGAPPY 238
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 93/207 (44%), Gaps = 14/207 (6%)
Query: 448 IGEGLLGSVYKAEL---PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELI 504
IG G G VY L G K+ K N ++ +FL + H N++ L+
Sbjct: 35 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 94
Query: 505 GYC-NEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCE 563
G C G L+V Y + L + + + E H ++ I L A+ ++YL
Sbjct: 95 GICLRSEGSPLVVLPYMKHGDLRNFIRN--ETHNPTVKDL-IGFGLQVAKGMKYL---AS 148
Query: 564 PPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSG---STNELSEGLLTAHGSGAPEFES 620
VH + + N +LDEK V+V+D GLA ++ S + + L ++
Sbjct: 149 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 208
Query: 621 GSYSCQSDVYSLGVVMLELLT-GRKPY 646
++ +SDV+S GV++ EL+T G PY
Sbjct: 209 QKFTTKSDVWSFGVLLWELMTRGAPPY 235
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 93/207 (44%), Gaps = 14/207 (6%)
Query: 448 IGEGLLGSVYKAEL---PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELI 504
IG G G VY L G K+ K N ++ +FL + H N++ L+
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 505 GYC-NEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCE 563
G C G L+V Y + L + + + E H ++ I L A+ ++YL
Sbjct: 97 GICLRSEGSPLVVLPYMKHGDLRNFIRN--ETHNPTVKDL-IGFGLQVAKGMKYL---AS 150
Query: 564 PPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSG---STNELSEGLLTAHGSGAPEFES 620
VH + + N +LDEK V+V+D GLA ++ S + + L ++
Sbjct: 151 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 210
Query: 621 GSYSCQSDVYSLGVVMLELLT-GRKPY 646
++ +SDV+S GV++ EL+T G PY
Sbjct: 211 QKFTTKSDVWSFGVLLWELMTRGAPPY 237
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 102/203 (50%), Gaps = 16/203 (7%)
Query: 448 IGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYC 507
+G G G V+ G +AVK L + + FL A+ + +L+H +V L
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLKQG---SMSPDAFLAEANLMKQLQHQRLVRLYAVV 73
Query: 508 NEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIV 567
+ +++ +Y N +L D L + + K + N + +A A + +++E +
Sbjct: 74 TQEPIYIIT-EYMENGSLVDFLKTP--SGIKLTINKLLDMAAQIAEGMAFIEERN---YI 127
Query: 568 HGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELS--EGLLTAHGSGAPE-FESGSYS 624
H N +++NIL+ + L +++D GLA L+ NE + EG APE G+++
Sbjct: 128 HRNLRAANILVSDTLSCKIADFGLARLI---EDNEYTAREGAKFPIKWTAPEAINYGTFT 184
Query: 625 CQSDVYSLGVVMLELLT-GRKPY 646
+SDV+S G+++ E++T GR PY
Sbjct: 185 IKSDVWSFGILLTEIVTHGRIPY 207
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 93/207 (44%), Gaps = 14/207 (6%)
Query: 448 IGEGLLGSVYKAEL---PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELI 504
IG G G VY L G K+ K N ++ +FL + H N++ L+
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 505 GYC-NEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCE 563
G C G L+V Y + L + + + E H ++ I L A+ ++YL
Sbjct: 96 GICLRSEGSPLVVLPYMKHGDLRNFIRN--ETHNPTVKDL-IGFGLQVAKGMKYL---AS 149
Query: 564 PPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSG---STNELSEGLLTAHGSGAPEFES 620
VH + + N +LDEK V+V+D GLA ++ S + + L ++
Sbjct: 150 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 209
Query: 621 GSYSCQSDVYSLGVVMLELLT-GRKPY 646
++ +SDV+S GV++ EL+T G PY
Sbjct: 210 QKFTTKSDVWSFGVLLWELMTRGAPPY 236
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 93/207 (44%), Gaps = 14/207 (6%)
Query: 448 IGEGLLGSVYKAEL---PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELI 504
IG G G VY L G K+ K N ++ +FL + H N++ L+
Sbjct: 33 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 92
Query: 505 GYC-NEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCE 563
G C G L+V Y + L + + + E H ++ I L A+ ++YL
Sbjct: 93 GICLRSEGSPLVVLPYMKHGDLRNFIRN--ETHNPTVKDL-IGFGLQVAKGMKYL---AS 146
Query: 564 PPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSG---STNELSEGLLTAHGSGAPEFES 620
VH + + N +LDEK V+V+D GLA ++ S + + L ++
Sbjct: 147 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 206
Query: 621 GSYSCQSDVYSLGVVMLELLT-GRKPY 646
++ +SDV+S GV++ EL+T G PY
Sbjct: 207 QKFTTKSDVWSFGVLLWELMTRGAPPY 233
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 98/228 (42%), Gaps = 33/228 (14%)
Query: 445 GNFIGEGLLGSVYKAELPG--------GKLLAVKKLSNTVSQRQTDEEFLELASTISRLR 496
G +GEG G V AE G +AVK L + +++ + E+ +
Sbjct: 33 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 497 HGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIR------------ 544
H NI+ L+G C + G ++ +Y L + L + E ++S+N
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 545 IRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLL-----FSGS 599
+ A AR ++YL +H + + N+L+ E +++++D GLA + + +
Sbjct: 153 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 209
Query: 600 TNELSEGLLTAHGSGAPEFESGSYSCQSDVYSLGVVMLELLT-GRKPY 646
TN G L Y+ QSDV+S GV++ E+ T G PY
Sbjct: 210 TN----GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 253
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 91/202 (45%), Gaps = 10/202 (4%)
Query: 448 IGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYC 507
+G G G V + G +A+K + +++EF+E A + L H +V+L G C
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEG---SMSEDEFIEEAKVMMNLSHEKLVQLYGVC 73
Query: 508 NEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIV 567
+ ++ +Y N L + L E +F + + A++YL+ +
Sbjct: 74 TKQRPIFIITEYMANGCLLNYLR---EMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFL 127
Query: 568 HGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFESGSYSCQS 627
H + + N L++++ +V+VSD GL+ + S +S +S
Sbjct: 128 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSSKS 187
Query: 628 DVYSLGVVMLELLT-GRKPYDR 648
D+++ GV+M E+ + G+ PY+R
Sbjct: 188 DIWAFGVLMWEIYSLGKMPYER 209
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 91/202 (45%), Gaps = 10/202 (4%)
Query: 448 IGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYC 507
+G G G V + G +A+K + +++EF+E A + L H +V+L G C
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEG---SMSEDEFIEEAKVMMNLSHEKLVQLYGVC 88
Query: 508 NEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIV 567
+ ++ +Y N L + L E +F + + A++YL+ +
Sbjct: 89 TKQRPIFIITEYMANGCLLNYLR---EMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFL 142
Query: 568 HGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFESGSYSCQS 627
H + + N L++++ +V+VSD GL+ + S +S +S
Sbjct: 143 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFSSKS 202
Query: 628 DVYSLGVVMLELLT-GRKPYDR 648
D+++ GV+M E+ + G+ PY+R
Sbjct: 203 DIWAFGVLMWEIYSLGKMPYER 224
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 105/219 (47%), Gaps = 24/219 (10%)
Query: 448 IGEGLLGSVYKAELPG------GKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIV 501
+GE G VYK L G + +A+K L + ++ EEF A +RL+H N+V
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDK-AEGPLREEFRHEAMLRARLQHPNVV 75
Query: 502 ELIGYCNEHGQHLLVYDYGGNCTLHDLL-----HS-----DEEAHKKFSWNIRIRVALGA 551
L+G + +++ Y + LH+ L HS D++ K + V L A
Sbjct: 76 CLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVA 135
Query: 552 --ARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLT 609
A ++YL +VH + + N+L+ +KL V++SD GL +++ +L L
Sbjct: 136 QIAAGMEYLS---SHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLL 192
Query: 610 AHGSGAPE-FESGSYSCQSDVYSLGVVMLELLT-GRKPY 646
APE G +S SD++S GVV+ E+ + G +PY
Sbjct: 193 PIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPY 231
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 91/202 (45%), Gaps = 10/202 (4%)
Query: 448 IGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYC 507
+G G G V + G +A+K + +++EF+E A + L H +V+L G C
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEG---SMSEDEFIEEAKVMMNLSHEKLVQLYGVC 88
Query: 508 NEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIV 567
+ ++ +Y N L + L E +F + + A++YL+ +
Sbjct: 89 TKQRPIFIITEYMANGCLLNYLR---EMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFL 142
Query: 568 HGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFESGSYSCQS 627
H + + N L++++ +V+VSD GL+ + S +S +S
Sbjct: 143 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 202
Query: 628 DVYSLGVVMLELLT-GRKPYDR 648
D+++ GV+M E+ + G+ PY+R
Sbjct: 203 DIWAFGVLMWEIYSLGKMPYER 224
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 91/202 (45%), Gaps = 10/202 (4%)
Query: 448 IGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYC 507
+G G G V + G +A+K + +++EF+E A + L H +V+L G C
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIKEG---SMSEDEFIEEAKVMMNLSHEKLVQLYGVC 72
Query: 508 NEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIV 567
+ ++ +Y N L + L E +F + + A++YL+ +
Sbjct: 73 TKQRPIFIITEYMANGCLLNYLR---EMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFL 126
Query: 568 HGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFESGSYSCQS 627
H + + N L++++ +V+VSD GL+ + S +S +S
Sbjct: 127 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 186
Query: 628 DVYSLGVVMLELLT-GRKPYDR 648
D+++ GV+M E+ + G+ PY+R
Sbjct: 187 DIWAFGVLMWEIYSLGKMPYER 208
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 95/224 (42%), Gaps = 25/224 (11%)
Query: 445 GNFIGEGLLGSVYKAELPG--------GKLLAVKKLSNTVSQRQTDEEFLELASTISRLR 496
G +GEG G V AE G +AVK L + +++ + E+ +
Sbjct: 33 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 497 HGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIR------------ 544
H NI+ L+G C + G ++ +Y L + L + +FS+N
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDL 152
Query: 545 IRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLA-PLLFSGSTNEL 603
+ A AR ++YL +H + + N+L+ E +++++D GLA + +
Sbjct: 153 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKT 209
Query: 604 SEGLLTAHGSGAPEFESGSYSCQSDVYSLGVVMLELLT-GRKPY 646
+ G L Y+ QSDV+S GV++ E+ T G PY
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 253
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 100/219 (45%), Gaps = 24/219 (10%)
Query: 448 IGEGLLGSVYKAELPG------GKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIV 501
+GE G VYK L G + +A+K L + ++ EEF A +RL+H N+V
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDK-AEGPLREEFRHEAMLRARLQHPNVV 92
Query: 502 ELIGYCNEHGQHLLVYDYGGNCTLHDLL-----HS-------DEEAHKKFSWNIRIRVAL 549
L+G + +++ Y + LH+ L HS D + +
Sbjct: 93 CLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVA 152
Query: 550 GAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLT 609
A ++YL +VH + + N+L+ +KL V++SD GL +++ +L L
Sbjct: 153 QIAAGMEYLS---SHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLL 209
Query: 610 AHGSGAPE-FESGSYSCQSDVYSLGVVMLELLT-GRKPY 646
APE G +S SD++S GVV+ E+ + G +PY
Sbjct: 210 PIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPY 248
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 93/207 (44%), Gaps = 14/207 (6%)
Query: 448 IGEGLLGSVYKAEL---PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELI 504
IG G G VY L G K+ K N ++ +FL + H N++ L+
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 505 GYC-NEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCE 563
G C G L+V Y + L + + + E H ++ I L A+ +++L
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRN--ETHNPTVKDL-IGFGLQVAKGMKFL---AS 151
Query: 564 PPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSG---STNELSEGLLTAHGSGAPEFES 620
VH + + N +LDEK V+V+D GLA ++ S + + L ++
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 211
Query: 621 GSYSCQSDVYSLGVVMLELLT-GRKPY 646
++ +SDV+S GV++ EL+T G PY
Sbjct: 212 QKFTTKSDVWSFGVLLWELMTRGAPPY 238
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 91/202 (45%), Gaps = 10/202 (4%)
Query: 448 IGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYC 507
+G G G V + G +A+K + +++EF+E A + L H +V+L G C
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEG---SMSEDEFIEEAKVMMNLSHEKLVQLYGVC 73
Query: 508 NEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIV 567
+ ++ +Y N L + L E +F + + A++YL+ +
Sbjct: 74 TKQRPIFIITEYMANGCLLNYLR---EMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFL 127
Query: 568 HGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFESGSYSCQS 627
H + + N L++++ +V+VSD GL+ + S +S +S
Sbjct: 128 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 187
Query: 628 DVYSLGVVMLELLT-GRKPYDR 648
D+++ GV+M E+ + G+ PY+R
Sbjct: 188 DIWAFGVLMWEIYSLGKMPYER 209
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 91/202 (45%), Gaps = 10/202 (4%)
Query: 448 IGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYC 507
+G G G V + G +A+K + +++EF+E A + L H +V+L G C
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKEG---SMSEDEFIEEAKVMMNLSHEKLVQLYGVC 68
Query: 508 NEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIV 567
+ ++ +Y N L + L E +F + + A++YL+ +
Sbjct: 69 TKQRPIFIITEYMANGCLLNYLR---EMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFL 122
Query: 568 HGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFESGSYSCQS 627
H + + N L++++ +V+VSD GL+ + S +S +S
Sbjct: 123 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 182
Query: 628 DVYSLGVVMLELLT-GRKPYDR 648
D+++ GV+M E+ + G+ PY+R
Sbjct: 183 DIWAFGVLMWEIYSLGKMPYER 204
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 104/211 (49%), Gaps = 24/211 (11%)
Query: 448 IGEGLLGSVY--KAELPGGKLL--AVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVEL 503
IG G G V + +LPG + L A+K L +++Q +FL AS + + H NI+ L
Sbjct: 30 IGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQR-RDFLGEASIMGQFDHPNIIHL 88
Query: 504 IGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCE 563
G + ++V +Y N +L L ++ +F+ + + G + ++YL ++
Sbjct: 89 EGVVTKSKPVMIVTEYMENGSLDTFLKKND---GQFTVIQLVGMLRGISAGMKYLSDMG- 144
Query: 564 PPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG------APE 617
VH + + NIL++ L+ +VSD GL+ +L + E T G APE
Sbjct: 145 --YVHRDLAARNILINSNLVCKVSDFGLSRVL-----EDDPEAAYTTRGGKIPIRWTAPE 197
Query: 618 -FESGSYSCQSDVYSLGVVMLELLT-GRKPY 646
++ SDV+S G+VM E+++ G +PY
Sbjct: 198 AIAFRKFTSASDVWSYGIVMWEVVSYGERPY 228
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 93/207 (44%), Gaps = 14/207 (6%)
Query: 448 IGEGLLGSVYKAEL---PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELI 504
IG G G VY L G K+ K N ++ +FL + H N++ L+
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 505 GYC-NEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCE 563
G C G L+V Y + L + + + E H ++ I L A+ +++L
Sbjct: 96 GICLRSEGSPLVVLPYMKHGDLRNFIRN--ETHNPTVKDL-IGFGLQVAKGMKFL---AS 149
Query: 564 PPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS---GSTNELSEGLLTAHGSGAPEFES 620
VH + + N +LDEK V+V+D GLA ++ S + + L ++
Sbjct: 150 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 209
Query: 621 GSYSCQSDVYSLGVVMLELLT-GRKPY 646
++ +SDV+S GV++ EL+T G PY
Sbjct: 210 QKFTTKSDVWSFGVLLWELMTRGAPPY 236
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 93/207 (44%), Gaps = 14/207 (6%)
Query: 448 IGEGLLGSVYKAEL---PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELI 504
IG G G VY L G K+ K N ++ +FL + H N++ L+
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 505 GYC-NEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCE 563
G C G L+V Y + L + + + E H ++ I L A+ +++L
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRN--ETHNPTVKDL-IGFGLQVAKGMKFL---AS 151
Query: 564 PPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS---GSTNELSEGLLTAHGSGAPEFES 620
VH + + N +LDEK V+V+D GLA ++ S + + L ++
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 211
Query: 621 GSYSCQSDVYSLGVVMLELLT-GRKPY 646
++ +SDV+S GV++ EL+T G PY
Sbjct: 212 QKFTTKSDVWSFGVLLWELMTRGAPPY 238
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 91/202 (45%), Gaps = 10/202 (4%)
Query: 448 IGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYC 507
+G G G V + G +A+K + +++EF+E A + L H +V+L G C
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIKEG---SMSEDEFIEEAKVMMNLSHEKLVQLYGVC 79
Query: 508 NEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIV 567
+ ++ +Y N L + L E +F + + A++YL+ +
Sbjct: 80 TKQRPIFIITEYMANGCLLNYLR---EMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFL 133
Query: 568 HGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFESGSYSCQS 627
H + + N L++++ +V+VSD GL+ + S +S +S
Sbjct: 134 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 193
Query: 628 DVYSLGVVMLELLT-GRKPYDR 648
D+++ GV+M E+ + G+ PY+R
Sbjct: 194 DIWAFGVLMWEIYSLGKMPYER 215
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 93/207 (44%), Gaps = 14/207 (6%)
Query: 448 IGEGLLGSVYKAEL---PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELI 504
IG G G VY L G K+ K N ++ +FL + H N++ L+
Sbjct: 43 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 102
Query: 505 GYC-NEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCE 563
G C G L+V Y + L + + + E H ++ I L A+ +++L
Sbjct: 103 GICLRSEGSPLVVLPYMKHGDLRNFIRN--ETHNPTVKDL-IGFGLQVAKGMKFL---AS 156
Query: 564 PPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSG---STNELSEGLLTAHGSGAPEFES 620
VH + + N +LDEK V+V+D GLA ++ S + + L ++
Sbjct: 157 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 216
Query: 621 GSYSCQSDVYSLGVVMLELLT-GRKPY 646
++ +SDV+S GV++ EL+T G PY
Sbjct: 217 QKFTTKSDVWSFGVLLWELMTRGAPPY 243
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 93/207 (44%), Gaps = 14/207 (6%)
Query: 448 IGEGLLGSVYKAEL---PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELI 504
IG G G VY L G K+ K N ++ +FL + H N++ L+
Sbjct: 97 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 156
Query: 505 GYC-NEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCE 563
G C G L+V Y + L + + + E H ++ I L A+ +++L
Sbjct: 157 GICLRSEGSPLVVLPYMKHGDLRNFIRN--ETHNPTVKDL-IGFGLQVAKGMKFL---AS 210
Query: 564 PPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSG---STNELSEGLLTAHGSGAPEFES 620
VH + + N +LDEK V+V+D GLA ++ S + + L ++
Sbjct: 211 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 270
Query: 621 GSYSCQSDVYSLGVVMLELLT-GRKPY 646
++ +SDV+S GV++ EL+T G PY
Sbjct: 271 QKFTTKSDVWSFGVLLWELMTRGAPPY 297
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 94/203 (46%), Gaps = 15/203 (7%)
Query: 448 IGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYC 507
+G G G V+ +AVK L Q FLE A+ + L+H +V L
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQA---FLEEANLMKTLQHDKLVRLYAVV 77
Query: 508 NEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIV 567
++ +Y +L D L SDE K I + A + Y++ +
Sbjct: 78 TREEPIYIITEYMAKGSLLDFLKSDEGG--KVLLPKLIDFSAQIAEGMAYIER---KNYI 132
Query: 568 HGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELS--EGLLTAHGSGAPE-FESGSYS 624
H + +++N+L+ E L+ +++D GLA ++ NE + EG APE G ++
Sbjct: 133 HRDLRAANVLVSESLMCKIADFGLARVI---EDNEYTAREGAKFPIKWTAPEAINFGCFT 189
Query: 625 CQSDVYSLGVVMLELLT-GRKPY 646
+SDV+S G+++ E++T G+ PY
Sbjct: 190 IKSDVWSFGILLYEIVTYGKIPY 212
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 93/207 (44%), Gaps = 14/207 (6%)
Query: 448 IGEGLLGSVYKAEL---PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELI 504
IG G G VY L G K+ K N ++ +FL + H N++ L+
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 505 GYC-NEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCE 563
G C G L+V Y + L + + + E H ++ I L A+ +++L
Sbjct: 99 GICLRSEGSPLVVLPYMKHGDLRNFIRN--ETHNPTVKDL-IGFGLQVAKGMKFL---AS 152
Query: 564 PPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSG---STNELSEGLLTAHGSGAPEFES 620
VH + + N +LDEK V+V+D GLA ++ S + + L ++
Sbjct: 153 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 212
Query: 621 GSYSCQSDVYSLGVVMLELLT-GRKPY 646
++ +SDV+S GV++ EL+T G PY
Sbjct: 213 QKFTTKSDVWSFGVLLWELMTRGAPPY 239
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 102/203 (50%), Gaps = 16/203 (7%)
Query: 448 IGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYC 507
+G G G V+ G +AVK L + + FL A+ + +L+H +V L
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSLKQG---SMSPDAFLAEANLMKQLQHQRLVRLYAVV 86
Query: 508 NEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIV 567
+ +++ +Y N +L D L + + K + N + +A A + +++E +
Sbjct: 87 TQEPIYIIT-EYMENGSLVDFLKTP--SGIKLTINKLLDMAAQIAEGMAFIEERN---YI 140
Query: 568 HGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELS--EGLLTAHGSGAPE-FESGSYS 624
H + +++NIL+ + L +++D GLA L+ NE + EG APE G+++
Sbjct: 141 HRDLRAANILVSDTLSCKIADFGLARLI---EDNEXTAREGAKFPIKWTAPEAINYGTFT 197
Query: 625 CQSDVYSLGVVMLELLT-GRKPY 646
+SDV+S G+++ E++T GR PY
Sbjct: 198 IKSDVWSFGILLTEIVTHGRIPY 220
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 102/203 (50%), Gaps = 16/203 (7%)
Query: 448 IGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYC 507
+G G G V+ G +AVK L + + FL A+ + +L+H +V L
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKSLKQG---SMSPDAFLAEANLMKQLQHQRLVRLYAVV 87
Query: 508 NEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIV 567
+ +++ +Y N +L D L + + K + N + +A A + +++E +
Sbjct: 88 TQEPIYIIT-EYMENGSLVDFLKTP--SGIKLTINKLLDMAAQIAEGMAFIEERN---YI 141
Query: 568 HGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELS--EGLLTAHGSGAPE-FESGSYS 624
H + +++NIL+ + L +++D GLA L+ NE + EG APE G+++
Sbjct: 142 HRDLRAANILVSDTLSCKIADFGLARLI---EDNEYTAREGAKFPIKWTAPEAINYGTFT 198
Query: 625 CQSDVYSLGVVMLELLT-GRKPY 646
+SDV+S G+++ E++T GR PY
Sbjct: 199 IKSDVWSFGILLTEIVTHGRIPY 221
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 102/203 (50%), Gaps = 16/203 (7%)
Query: 448 IGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYC 507
+G G G V+ G +AVK L + + FL A+ + +L+H +V L
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLKQG---SMSPDAFLAEANLMKQLQHQRLVRLYAVV 79
Query: 508 NEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIV 567
+ +++ +Y N +L D L + + K + N + +A A + +++E +
Sbjct: 80 TQEPIYIIT-EYMENGSLVDFLKTP--SGIKLTINKLLDMAAQIAEGMAFIEERN---YI 133
Query: 568 HGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELS--EGLLTAHGSGAPE-FESGSYS 624
H + +++NIL+ + L +++D GLA L+ NE + EG APE G+++
Sbjct: 134 HRDLRAANILVSDTLSCKIADFGLARLI---EDNEXTAREGAKFPIKWTAPEAINYGTFT 190
Query: 625 CQSDVYSLGVVMLELLT-GRKPY 646
+SDV+S G+++ E++T GR PY
Sbjct: 191 IKSDVWSFGILLTEIVTHGRIPY 213
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 102/203 (50%), Gaps = 16/203 (7%)
Query: 448 IGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYC 507
+G G G V+ G +AVK L + + FL A+ + +L+H +V L
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQG---SMSPDAFLAEANLMKQLQHQRLVRLYAVV 83
Query: 508 NEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIV 567
+ +++ +Y N +L D L + + K + N + +A A + +++E +
Sbjct: 84 TQEPIYIIT-EYMENGSLVDFLKTP--SGIKLTINKLLDMAAQIAEGMAFIEERN---YI 137
Query: 568 HGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELS--EGLLTAHGSGAPE-FESGSYS 624
H + +++NIL+ + L +++D GLA L+ NE + EG APE G+++
Sbjct: 138 HRDLRAANILVSDTLSCKIADFGLARLI---EDNEXTAREGAKFPIKWTAPEAINYGTFT 194
Query: 625 CQSDVYSLGVVMLELLT-GRKPY 646
+SDV+S G+++ E++T GR PY
Sbjct: 195 IKSDVWSFGILLTEIVTHGRIPY 217
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 102/203 (50%), Gaps = 16/203 (7%)
Query: 448 IGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYC 507
+G G G V+ G +AVK L + + FL A+ + +L+H +V L
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQG---SMSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 508 NEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIV 567
+ +++ +Y N +L D L + + K + N + +A A + +++E +
Sbjct: 78 TQEPIYIIT-EYMENGSLVDFLKTP--SGIKLTINKLLDMAAQIAEGMAFIEERN---YI 131
Query: 568 HGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELS--EGLLTAHGSGAPE-FESGSYS 624
H + +++NIL+ + L +++D GLA L+ NE + EG APE G+++
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLI---EDNEYTAREGAKFPIKWTAPEAINYGTFT 188
Query: 625 CQSDVYSLGVVMLELLT-GRKPY 646
+SDV+S G+++ E++T GR PY
Sbjct: 189 IKSDVWSFGILLTEIVTHGRIPY 211
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 102/203 (50%), Gaps = 16/203 (7%)
Query: 448 IGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYC 507
+G G G V+ G +AVK L + + FL A+ + +L+H +V L
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSLKQG---SMSPDAFLAEANLMKQLQHQRLVRLYAVV 82
Query: 508 NEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIV 567
+ +++ +Y N +L D L + + K + N + +A A + +++E +
Sbjct: 83 TQEPIYIIT-EYMENGSLVDFLKTP--SGIKLTINKLLDMAAQIAEGMAFIEERN---YI 136
Query: 568 HGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELS--EGLLTAHGSGAPE-FESGSYS 624
H + +++NIL+ + L +++D GLA L+ NE + EG APE G+++
Sbjct: 137 HRDLRAANILVSDTLSCKIADFGLARLI---EDNEYTAREGAKFPIKWTAPEAINYGTFT 193
Query: 625 CQSDVYSLGVVMLELLT-GRKPY 646
+SDV+S G+++ E++T GR PY
Sbjct: 194 IKSDVWSFGILLTEIVTHGRIPY 216
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 102/203 (50%), Gaps = 16/203 (7%)
Query: 448 IGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYC 507
+G G G V+ G +AVK L + + FL A+ + +L+H +V L
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQG---SMSPDAFLAEANLMKQLQHQRLVRLYAVV 83
Query: 508 NEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIV 567
+ +++ +Y N +L D L + + K + N + +A A + +++E +
Sbjct: 84 TQEPIYIIT-EYMENGSLVDFLKTP--SGIKLTINKLLDMAAQIAEGMAFIEERN---YI 137
Query: 568 HGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELS--EGLLTAHGSGAPE-FESGSYS 624
H + +++NIL+ + L +++D GLA L+ NE + EG APE G+++
Sbjct: 138 HRDLRAANILVSDTLSCKIADFGLARLI---EDNEYTAREGAKFPIKWTAPEAINYGTFT 194
Query: 625 CQSDVYSLGVVMLELLT-GRKPY 646
+SDV+S G+++ E++T GR PY
Sbjct: 195 IKSDVWSFGILLTEIVTHGRIPY 217
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 102/203 (50%), Gaps = 16/203 (7%)
Query: 448 IGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYC 507
+G G G V+ G +AVK L + + FL A+ + +L+H +V L
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKSLKQG---SMSPDAFLAEANLMKQLQHQRLVRLYAVV 85
Query: 508 NEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIV 567
+ +++ +Y N +L D L + + K + N + +A A + +++E +
Sbjct: 86 TQEPIYIIT-EYMENGSLVDFLKTP--SGIKLTINKLLDMAAQIAEGMAFIEERN---YI 139
Query: 568 HGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELS--EGLLTAHGSGAPE-FESGSYS 624
H + +++NIL+ + L +++D GLA L+ NE + EG APE G+++
Sbjct: 140 HRDLRAANILVSDTLSCKIADFGLARLI---EDNEXTAREGAKFPIKWTAPEAINYGTFT 196
Query: 625 CQSDVYSLGVVMLELLT-GRKPY 646
+SDV+S G+++ E++T GR PY
Sbjct: 197 IKSDVWSFGILLTEIVTHGRIPY 219
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 100/211 (47%), Gaps = 24/211 (11%)
Query: 448 IGEGLLGSVY--KAELPGGKLL--AVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVEL 503
+G G G V + +LP K + A+K L +++Q +FL AS + + H NI+ L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR-RDFLGEASIMGQFDHPNIIRL 111
Query: 504 IGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCE 563
G + ++V +Y N +L L + +F+ + + G A ++YL ++
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHD---AQFTVIQLVGMLRGIASGMKYLSDMG- 167
Query: 564 PPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAP------- 616
VH + + NIL++ L+ +VSD GLA +L + E T G P
Sbjct: 168 --YVHRDLAARNILINSNLVCKVSDFGLARVL-----EDDPEAAYTTRGGKIPIRWTSPE 220
Query: 617 EFESGSYSCQSDVYSLGVVMLELLT-GRKPY 646
++ SDV+S G+V+ E+++ G +PY
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEVMSYGERPY 251
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 102/203 (50%), Gaps = 16/203 (7%)
Query: 448 IGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYC 507
+G G G V+ G +AVK L + + FL A+ + +L+H +V L
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLKQG---SMSPDAFLAEANLMKQLQHQRLVRLYAVV 78
Query: 508 NEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIV 567
+ +++ +Y N +L D L + + K + N + +A A + +++E +
Sbjct: 79 TQEPIYIIT-EYMENGSLVDFLKTP--SGIKLTINKLLDMAAQIAEGMAFIEERN---YI 132
Query: 568 HGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELS--EGLLTAHGSGAPE-FESGSYS 624
H + +++NIL+ + L +++D GLA L+ NE + EG APE G+++
Sbjct: 133 HRDLRAANILVSDTLSCKIADFGLARLI---EDNEXTAREGAKFPIKWTAPEAINYGTFT 189
Query: 625 CQSDVYSLGVVMLELLT-GRKPY 646
+SDV+S G+++ E++T GR PY
Sbjct: 190 IKSDVWSFGILLTEIVTHGRIPY 212
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 102/203 (50%), Gaps = 16/203 (7%)
Query: 448 IGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYC 507
+G G G V+ G +AVK L + + FL A+ + +L+H +V L
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQG---SMSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 508 NEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIV 567
+ +++ +Y N +L D L + + K + N + +A A + +++E +
Sbjct: 78 TQEPIYIIT-EYMENGSLVDFLKTP--SGIKLTINKLLDMAAQIAEGMAFIEERN---YI 131
Query: 568 HGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELS--EGLLTAHGSGAPE-FESGSYS 624
H + +++NIL+ + L +++D GLA L+ NE + EG APE G+++
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLI---EDNEXTAREGAKFPIKWTAPEAINYGTFT 188
Query: 625 CQSDVYSLGVVMLELLT-GRKPY 646
+SDV+S G+++ E++T GR PY
Sbjct: 189 IKSDVWSFGILLTEIVTHGRIPY 211
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 108/223 (48%), Gaps = 18/223 (8%)
Query: 448 IGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYC 507
+G G G V+ A +AVK + + E FL A+ + L+H +V+L
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTMK---PGSMSVEAFLAEANVMKTLQHDKLVKLHAVV 79
Query: 508 NEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIV 567
+ +++ ++ +L D L SDE + + I + A + + +
Sbjct: 80 TKEPIYIIT-EFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAF-----IEQRNYI 133
Query: 568 HGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELS--EGLLTAHGSGAPE-FESGSYS 624
H + +++NIL+ L+ +++D GLA ++ NE + EG APE GS++
Sbjct: 134 HRDLRAANILVSASLVCKIADFGLARVI---EDNEYTAREGAKFPIKWTAPEAINFGSFT 190
Query: 625 CQSDVYSLGVVMLELLT-GRKPYD-RSRPRGEQSLVR-WAIPR 664
+SDV+S G++++E++T GR PY S P ++L R + +PR
Sbjct: 191 IKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPR 233
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 102/203 (50%), Gaps = 16/203 (7%)
Query: 448 IGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYC 507
+G G G V+ G +AVK L + + FL A+ + +L+H +V L
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQG---SMSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 508 NEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIV 567
+ +++ +Y N +L D L + + K + N + +A A + +++E +
Sbjct: 78 TQEPIYIIT-EYMENGSLVDFLKTP--SGIKLTINKLLDMAAQIAEGMAFIEERN---YI 131
Query: 568 HGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELS--EGLLTAHGSGAPE-FESGSYS 624
H + +++NIL+ + L +++D GLA L+ NE + EG APE G+++
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLI---EDNEXTAREGAKFPIKWTAPEAINYGTFT 188
Query: 625 CQSDVYSLGVVMLELLT-GRKPY 646
+SDV+S G+++ E++T GR PY
Sbjct: 189 IKSDVWSFGILLTEIVTHGRIPY 211
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 94/209 (44%), Gaps = 26/209 (12%)
Query: 448 IGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYC 507
+G G G V + G +AVK + +++EF + A T+ +L H +V+ G C
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKEG---SMSEDEFFQEAQTMMKLSHPKLVKFYGVC 72
Query: 508 NEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCE---- 563
++ +V +Y N L + L S H K L ++ L+ +VCE
Sbjct: 73 SKEYPIYIVTEYISNGCLLNYLRS----HGK---------GLEPSQLLEMCYDVCEGMAF 119
Query: 564 ---PPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPE-FE 619
+H + + N L+D L V+VSD G+ + S G APE F
Sbjct: 120 LESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVS-SVGTKFPVKWSAPEVFH 178
Query: 620 SGSYSCQSDVYSLGVVMLELLT-GRKPYD 647
YS +SDV++ G++M E+ + G+ PYD
Sbjct: 179 YFKYSSKSDVWAFGILMWEVFSLGKMPYD 207
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 102/203 (50%), Gaps = 16/203 (7%)
Query: 448 IGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYC 507
+G G G V+ G +AVK L + + FL A+ + +L+H +V L
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLKQG---SMSPDAFLAEANLMKQLQHQRLVRLYAVV 72
Query: 508 NEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIV 567
+ +++ +Y N +L D L + + K + N + +A A + +++E +
Sbjct: 73 TQEPIYIIT-EYMENGSLVDFLKTP--SGIKLTINKLLDMAAQIAEGMAFIEERN---YI 126
Query: 568 HGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELS--EGLLTAHGSGAPE-FESGSYS 624
H + +++NIL+ + L +++D GLA L+ NE + EG APE G+++
Sbjct: 127 HRDLRAANILVSDTLSCKIADFGLARLI---EDNEYTAREGAKFPIKWTAPEAINYGTFT 183
Query: 625 CQSDVYSLGVVMLELLT-GRKPY 646
+SDV+S G+++ E++T GR PY
Sbjct: 184 IKSDVWSFGILLTEIVTHGRIPY 206
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 97/228 (42%), Gaps = 33/228 (14%)
Query: 445 GNFIGEGLLGSVYKAELPG--------GKLLAVKKLSNTVSQRQTDEEFLELASTISRLR 496
G +GEG G V AE G +AVK L + +++ + E+ +
Sbjct: 26 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 85
Query: 497 HGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIR------------ 544
H NI+ L+G C + G ++ +Y L + L + ++S+N
Sbjct: 86 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 145
Query: 545 IRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLL-----FSGS 599
+ A AR ++YL +H + + N+L+ E +++++D GLA + + +
Sbjct: 146 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 202
Query: 600 TNELSEGLLTAHGSGAPEFESGSYSCQSDVYSLGVVMLELLT-GRKPY 646
TN G L Y+ QSDV+S GV++ E+ T G PY
Sbjct: 203 TN----GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 246
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 97/228 (42%), Gaps = 33/228 (14%)
Query: 445 GNFIGEGLLGSVYKAELPG--------GKLLAVKKLSNTVSQRQTDEEFLELASTISRLR 496
G +GEG G V AE G +AVK L + +++ + E+ +
Sbjct: 74 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 133
Query: 497 HGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIR------------ 544
H NI+ L+G C + G ++ +Y L + L + ++S+N
Sbjct: 134 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 193
Query: 545 IRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLL-----FSGS 599
+ A AR ++YL +H + + N+L+ E +++++D GLA + + +
Sbjct: 194 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 250
Query: 600 TNELSEGLLTAHGSGAPEFESGSYSCQSDVYSLGVVMLELLT-GRKPY 646
TN G L Y+ QSDV+S GV++ E+ T G PY
Sbjct: 251 TN----GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 294
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 100/211 (47%), Gaps = 24/211 (11%)
Query: 448 IGEGLLGSVY--KAELPGGKLL--AVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVEL 503
+G G G V + +LP K + A+K L +++Q +FL AS + + H NI+ L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR-RDFLGEASIMGQFDHPNIIRL 111
Query: 504 IGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCE 563
G + ++V +Y N +L L + +F+ + + G A ++YL ++
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHD---AQFTVIQLVGMLRGIASGMKYLSDMG- 167
Query: 564 PPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAP------- 616
VH + + NIL++ L+ +VSD GL+ +L + E T G P
Sbjct: 168 --FVHRDLAARNILINSNLVCKVSDFGLSRVL-----EDDPEAAYTTRGGKIPIRWTSPE 220
Query: 617 EFESGSYSCQSDVYSLGVVMLELLT-GRKPY 646
++ SDV+S G+V+ E+++ G +PY
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEVMSYGERPY 251
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 99/207 (47%), Gaps = 21/207 (10%)
Query: 448 IGEGLLGSVYKA-ELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRL-RHGNIVELIG 505
+GEG G V A G+ +A+K ++ V + + +E + RL RH +I++L
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 71
Query: 506 YCNEHGQHLLVYDYGGNCTLHDLLHSD---EEAHKKFSWNIRIRVALGAARALQYLQEVC 562
+ ++V +Y GN ++ D E+ ++F I A++Y
Sbjct: 72 VIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQI--------ISAVEYCHR-- 121
Query: 563 EPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFESGS 622
IVH + K N+LLDE L V+++D GL+ ++ G+ + S G + APE SG
Sbjct: 122 -HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCG---SPNYAAPEVISGK 177
Query: 623 YSC--QSDVYSLGVVMLELLTGRKPYD 647
+ DV+S GV++ +L R P+D
Sbjct: 178 LYAGPEVDVWSCGVILYVMLCRRLPFD 204
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 97/228 (42%), Gaps = 33/228 (14%)
Query: 445 GNFIGEGLLGSVYKAELPG--------GKLLAVKKLSNTVSQRQTDEEFLELASTISRLR 496
G +GEG G V AE G +AVK L + +++ + E+ +
Sbjct: 33 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 497 HGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIR------------ 544
H NI+ L+G C + G ++ +Y L + L + ++S+N
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 545 IRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLL-----FSGS 599
+ A AR ++YL +H + + N+L+ E +++++D GLA + + +
Sbjct: 153 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 209
Query: 600 TNELSEGLLTAHGSGAPEFESGSYSCQSDVYSLGVVMLELLT-GRKPY 646
TN G L Y+ QSDV+S GV++ E+ T G PY
Sbjct: 210 TN----GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 253
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 97/228 (42%), Gaps = 33/228 (14%)
Query: 445 GNFIGEGLLGSVYKAELPG--------GKLLAVKKLSNTVSQRQTDEEFLELASTISRLR 496
G +GEG G V AE G +AVK L + +++ + E+ +
Sbjct: 25 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 84
Query: 497 HGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIR------------ 544
H NI+ L+G C + G ++ +Y L + L + ++S+N
Sbjct: 85 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 144
Query: 545 IRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLL-----FSGS 599
+ A AR ++YL +H + + N+L+ E +++++D GLA + + +
Sbjct: 145 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 201
Query: 600 TNELSEGLLTAHGSGAPEFESGSYSCQSDVYSLGVVMLELLT-GRKPY 646
TN G L Y+ QSDV+S GV++ E+ T G PY
Sbjct: 202 TN----GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 245
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 100/201 (49%), Gaps = 12/201 (5%)
Query: 448 IGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYC 507
+G G G V+ G +AVK L + + FL A+ + +L+H +V L
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLKQG---SMSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 508 NEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIV 567
+ +++ +Y N +L D L + + K + N + +A A + +++E +
Sbjct: 78 TQEPIYIIT-EYMENGSLVDFLKTP--SGIKLTINKLLDMAAQIAEGMAFIEERN---YI 131
Query: 568 HGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPE-FESGSYSCQ 626
H + +++NIL+ + L +++D GLA L+ + EG APE G+++ +
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLI-EDAEXTAREGAKFPIKWTAPEAINYGTFTIK 190
Query: 627 SDVYSLGVVMLELLT-GRKPY 646
SDV+S G+++ E++T GR PY
Sbjct: 191 SDVWSFGILLTEIVTHGRIPY 211
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 97/228 (42%), Gaps = 33/228 (14%)
Query: 445 GNFIGEGLLGSVYKAELPG--------GKLLAVKKLSNTVSQRQTDEEFLELASTISRLR 496
G +GEG G V AE G +AVK L + +++ + E+ +
Sbjct: 22 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 81
Query: 497 HGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIR------------ 544
H NI+ L+G C + G ++ +Y L + L + ++S+N
Sbjct: 82 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 141
Query: 545 IRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLL-----FSGS 599
+ A AR ++YL +H + + N+L+ E +++++D GLA + + +
Sbjct: 142 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 198
Query: 600 TNELSEGLLTAHGSGAPEFESGSYSCQSDVYSLGVVMLELLT-GRKPY 646
TN G L Y+ QSDV+S GV++ E+ T G PY
Sbjct: 199 TN----GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 242
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 119/274 (43%), Gaps = 25/274 (9%)
Query: 446 NFIGEGLLGSVYKAE-LPGGKLLAVK---KLSNTVSQRQTDEEFLELASTISRLRHGNIV 501
+G G+ G+V+K +P G+ + + K+ S RQ+ + + I L H +IV
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 96
Query: 502 ELIGYCNEHGQHL-LVYDYGGNCTLHDLLHSDEEA---HKKFSWNIRIRVALGAARALQY 557
L+G C G L LV Y +L D + A +W ++I A+ + Y
Sbjct: 97 RLLGLCP--GSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQI------AKGMYY 148
Query: 558 LQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNEL-SEGLLTAHGSGAP 616
L+E +VH N + N+LL V+V+D G+A LL L SE
Sbjct: 149 LEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALE 205
Query: 617 EFESGSYSCQSDVYSLGVVMLELLT-GRKPYDRSR----PRGEQSLVRWAIPRLHDIDAL 671
G Y+ QSDV+S GV + EL+T G +PY R P + R A P++ ID
Sbjct: 206 SIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQPQICTIDVY 265
Query: 672 SRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGF 705
MV + + + A+ +R + P +
Sbjct: 266 MVMVKCWMIDENIRPTFKELANEFTRMARDPPRY 299
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 99/207 (47%), Gaps = 21/207 (10%)
Query: 448 IGEGLLGSVYKA-ELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRL-RHGNIVELIG 505
+GEG G V A G+ +A+K ++ V + + +E + RL RH +I++L
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 81
Query: 506 YCNEHGQHLLVYDYGGNCTLHDLLHSD---EEAHKKFSWNIRIRVALGAARALQYLQEVC 562
+ ++V +Y GN ++ D E+ ++F I A++Y
Sbjct: 82 VIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQI--------ISAVEYCHR-- 131
Query: 563 EPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFESGS 622
IVH + K N+LLDE L V+++D GL+ ++ G+ + S G + APE SG
Sbjct: 132 -HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCG---SPNYAAPEVISGK 187
Query: 623 YSC--QSDVYSLGVVMLELLTGRKPYD 647
+ DV+S GV++ +L R P+D
Sbjct: 188 LYAGPEVDVWSCGVILYVMLCRRLPFD 214
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 99/207 (47%), Gaps = 21/207 (10%)
Query: 448 IGEGLLGSVYKA-ELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRL-RHGNIVELIG 505
+GEG G V A G+ +A+K ++ V + + +E + RL RH +I++L
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 75
Query: 506 YCNEHGQHLLVYDYGGNCTLHDLLHSD---EEAHKKFSWNIRIRVALGAARALQYLQEVC 562
+ ++V +Y GN ++ D E+ ++F I A++Y
Sbjct: 76 VIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQI--------ISAVEYCHR-- 125
Query: 563 EPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFESGS 622
IVH + K N+LLDE L V+++D GL+ ++ G+ + S G + APE SG
Sbjct: 126 -HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCG---SPNYAAPEVISGK 181
Query: 623 YSC--QSDVYSLGVVMLELLTGRKPYD 647
+ DV+S GV++ +L R P+D
Sbjct: 182 LYAGPEVDVWSCGVILYVMLCRRLPFD 208
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 14/207 (6%)
Query: 448 IGEGLLGSVYKAEL---PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELI 504
IG G G VY L G K+ K N ++ +FL + H N++ L+
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 505 GYC-NEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCE 563
G C G L+V Y + L + + + E H ++ I L A+ +++L
Sbjct: 99 GICLRSEGSPLVVLPYMKHGDLRNFIRN--ETHNPTVKDL-IGFGLQVAKGMKFL---AS 152
Query: 564 PPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSG---STNELSEGLLTAHGSGAPEFES 620
VH + + N +LDEK V+V+D GLA + S + + L ++
Sbjct: 153 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQT 212
Query: 621 GSYSCQSDVYSLGVVMLELLT-GRKPY 646
++ +SDV+S GV++ EL+T G PY
Sbjct: 213 QKFTTKSDVWSFGVLLWELMTRGAPPY 239
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 99/207 (47%), Gaps = 21/207 (10%)
Query: 448 IGEGLLGSVYKA-ELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRL-RHGNIVELIG 505
+GEG G V A G+ +A+K ++ V + + +E + RL RH +I++L
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 80
Query: 506 YCNEHGQHLLVYDYGGNCTLHDLLHSD---EEAHKKFSWNIRIRVALGAARALQYLQEVC 562
+ ++V +Y GN ++ D E+ ++F I A++Y
Sbjct: 81 VIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQI--------ISAVEYCHR-- 130
Query: 563 EPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFESGS 622
IVH + K N+LLDE L V+++D GL+ ++ G+ + S G + APE SG
Sbjct: 131 -HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCG---SPNYAAPEVISGK 186
Query: 623 YSC--QSDVYSLGVVMLELLTGRKPYD 647
+ DV+S GV++ +L R P+D
Sbjct: 187 LYAGPEVDVWSCGVILYVMLCRRLPFD 213
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 21/212 (9%)
Query: 446 NFIGEGLLGSVYKA-ELPGGKLLAVK---KLSNTVSQRQTDEEFLELASTISRLRHGNIV 501
+G G G+VYK +P G+ + + K+ N + + + EF++ A ++ + H ++V
Sbjct: 44 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 103
Query: 502 ELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEE---AHKKFSWNIRIRVALGAARALQYL 558
L+G C L+ C L + +H ++ + +W ++I A+ + YL
Sbjct: 104 RLLGVCLSPTIQLVTQLMPHGCLL-EYVHEHKDNIGSQLLLNWCVQI------AKGMMYL 156
Query: 559 QEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSE--GLLTAHGSGAP 616
+E +VH + + N+L+ V+++D GLA LL G E + G +
Sbjct: 157 EER---RLVHRDLAARNVLVKSPNHVKITDFGLARLL-EGDEKEYNADGGKMPIKWMALE 212
Query: 617 EFESGSYSCQSDVYSLGVVMLELLT-GRKPYD 647
++ QSDV+S GV + EL+T G KPYD
Sbjct: 213 CIHYRKFTHQSDVWSYGVTIWELMTFGGKPYD 244
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 108/223 (48%), Gaps = 18/223 (8%)
Query: 448 IGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYC 507
+G G G V+ A +AVK + + E FL A+ + L+H +V+L
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTMK---PGSMSVEAFLAEANVMKTLQHDKLVKLHAVV 252
Query: 508 NEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIV 567
+ +++ ++ +L D L SDE + + I + A + + +
Sbjct: 253 TKEPIYIIT-EFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAF-----IEQRNYI 306
Query: 568 HGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELS--EGLLTAHGSGAPE-FESGSYS 624
H + +++NIL+ L+ +++D GLA ++ NE + EG APE GS++
Sbjct: 307 HRDLRAANILVSASLVCKIADFGLARVI---EDNEYTAREGAKFPIKWTAPEAINFGSFT 363
Query: 625 CQSDVYSLGVVMLELLT-GRKPY-DRSRPRGEQSLVR-WAIPR 664
+SDV+S G++++E++T GR PY S P ++L R + +PR
Sbjct: 364 IKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPR 406
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 100/211 (47%), Gaps = 24/211 (11%)
Query: 448 IGEGLLGSVYKAEL--PGGK--LLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVEL 503
IG G G V L PG + +A+K L + +Q +FL AS + + H NI+ L
Sbjct: 37 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQR-RDFLSEASIMGQFDHPNIIHL 95
Query: 504 IGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCE 563
G + +++ +Y N +L L ++ +F+ + + G ++YL ++
Sbjct: 96 EGVVTKCKPVMIITEYMENGSLDAFLRKND---GRFTVIQLVGMLRGIGSGMKYLSDMSA 152
Query: 564 PPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG------APE 617
VH + + NIL++ L+ +VSD G++ +L + E T G APE
Sbjct: 153 ---VHRDLAARNILVNSNLVCKVSDFGMSRVL-----EDDPEAAYTTRGGKIPIRWTAPE 204
Query: 618 -FESGSYSCQSDVYSLGVVMLELLT-GRKPY 646
++ SDV+S G+VM E+++ G +PY
Sbjct: 205 AIAYRKFTSASDVWSYGIVMWEVMSYGERPY 235
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 119/274 (43%), Gaps = 25/274 (9%)
Query: 446 NFIGEGLLGSVYK-AELPGGKLLAVK---KLSNTVSQRQTDEEFLELASTISRLRHGNIV 501
+G G+ G+V+K +P G+ + + K+ S RQ+ + + I L H +IV
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 78
Query: 502 ELIGYCNEHGQHL-LVYDYGGNCTLHDLLHSDEEA---HKKFSWNIRIRVALGAARALQY 557
L+G C G L LV Y +L D + A +W ++I A+ + Y
Sbjct: 79 RLLGLCP--GSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQI------AKGMYY 130
Query: 558 LQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNEL-SEGLLTAHGSGAP 616
L+E +VH N + N+LL V+V+D G+A LL L SE
Sbjct: 131 LEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALE 187
Query: 617 EFESGSYSCQSDVYSLGVVMLELLT-GRKPYDRSR----PRGEQSLVRWAIPRLHDIDAL 671
G Y+ QSDV+S GV + EL+T G +PY R P + R A P++ ID
Sbjct: 188 SIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQPQICTIDVY 247
Query: 672 SRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGF 705
MV + + + A+ +R + P +
Sbjct: 248 MVMVKCWMIDENIRPTFKELANEFTRMARDPPRY 281
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 21/212 (9%)
Query: 446 NFIGEGLLGSVYKA-ELPGGKLLAVK---KLSNTVSQRQTDEEFLELASTISRLRHGNIV 501
+G G G+VYK +P G+ + + K+ N + + + EF++ A ++ + H ++V
Sbjct: 21 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 80
Query: 502 ELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEE---AHKKFSWNIRIRVALGAARALQYL 558
L+G C L+ C L + +H ++ + +W ++I A+ + YL
Sbjct: 81 RLLGVCLSPTIQLVTQLMPHGCLL-EYVHEHKDNIGSQLLLNWCVQI------AKGMMYL 133
Query: 559 QEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSE--GLLTAHGSGAP 616
+E +VH + + N+L+ V+++D GLA LL G E + G +
Sbjct: 134 EER---RLVHRDLAARNVLVKSPNHVKITDFGLARLL-EGDEKEYNADGGKMPIKWMALE 189
Query: 617 EFESGSYSCQSDVYSLGVVMLELLT-GRKPYD 647
++ QSDV+S GV + EL+T G KPYD
Sbjct: 190 CIHYRKFTHQSDVWSYGVTIWELMTFGGKPYD 221
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 94/215 (43%), Gaps = 20/215 (9%)
Query: 448 IGEGLLGSVYKAELPGGKL----LAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVEL 503
IG+G G VY E A+K LS +++ Q E FL + L H N++ L
Sbjct: 29 IGKGHFGVVYHGEYIDQAQNRIQCAIKSLSR-ITEMQQVEAFLREGLLMRGLNHPNVLAL 87
Query: 504 IGYC--NEHGQHLLV-YDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQE 560
IG E H+L+ Y G DLL + + I L AR ++YL
Sbjct: 88 IGIMLPPEGLPHVLLPYMCHG-----DLLQFIRSPQRNPTVKDLISFGLQVARGMEYL-- 140
Query: 561 VCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSG---STNELSEGLLTAHGSGAPE 617
E VH + + N +LDE V+V+D GLA + S + L +
Sbjct: 141 -AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALES 199
Query: 618 FESGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRP 651
++ ++ +SDV+S GV++ ELLT G PY P
Sbjct: 200 LQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDP 234
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 102/219 (46%), Gaps = 24/219 (10%)
Query: 440 NSFSEGNFIGEGLLGSVY--KAELPGGKLL--AVKKLSNTVSQRQTDEEFLELASTISRL 495
+ S +G G G V + +LP K + A+K L +++Q +FL AS + +
Sbjct: 33 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR-RDFLGEASIMGQF 91
Query: 496 RHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARAL 555
H NI+ L G + ++V +Y N +L L + +F+ + + G A +
Sbjct: 92 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD---AQFTVIQLVGMLRGIASGM 148
Query: 556 QYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGA 615
+YL ++ VH + + NIL++ L+ +VSD GL+ +L + E T G
Sbjct: 149 KYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVL-----EDDPEAAYTTRGGKI 200
Query: 616 P-------EFESGSYSCQSDVYSLGVVMLELLT-GRKPY 646
P ++ SDV+S G+V+ E+++ G +PY
Sbjct: 201 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY 239
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 100/211 (47%), Gaps = 24/211 (11%)
Query: 448 IGEGLLGSVY--KAELPGGKLL--AVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVEL 503
+G G G V + +LP K + A+K L +++Q +FL AS + + H NI+ L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR-RDFLGEASIMGQFDHPNIIRL 111
Query: 504 IGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCE 563
G + ++V +Y N +L L + +F+ + + G A ++YL ++
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHD---AQFTVIQLVGMLRGIASGMKYLSDMG- 167
Query: 564 PPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAP------- 616
VH + + NIL++ L+ +VSD GL+ +L + E T G P
Sbjct: 168 --YVHRDLAARNILINSNLVCKVSDFGLSRVL-----EDDPEAAYTTRGGKIPIRWTSPE 220
Query: 617 EFESGSYSCQSDVYSLGVVMLELLT-GRKPY 646
++ SDV+S G+V+ E+++ G +PY
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEVMSYGERPY 251
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 102/219 (46%), Gaps = 24/219 (10%)
Query: 440 NSFSEGNFIGEGLLGSVY--KAELPGGKLL--AVKKLSNTVSQRQTDEEFLELASTISRL 495
+ S +G G G V + +LP K + A+K L +++Q +FL AS + +
Sbjct: 16 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR-RDFLGEASIMGQF 74
Query: 496 RHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARAL 555
H NI+ L G + ++V +Y N +L L + +F+ + + G A +
Sbjct: 75 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD---AQFTVIQLVGMLRGIASGM 131
Query: 556 QYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGA 615
+YL ++ VH + + NIL++ L+ +VSD GL+ +L + E T G
Sbjct: 132 KYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVL-----EDDPEAAYTTRGGKI 183
Query: 616 P-------EFESGSYSCQSDVYSLGVVMLELLT-GRKPY 646
P ++ SDV+S G+V+ E+++ G +PY
Sbjct: 184 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY 222
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 110/270 (40%), Gaps = 21/270 (7%)
Query: 448 IGEGLLGSVYKAE-LPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGY 506
+G G G V K +P G++ AVK++ TV+ ++ +L + + V G
Sbjct: 42 LGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTVDCPFTVTFYGA 101
Query: 507 CNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPI 566
G + + + +L + + +I ++A+ +AL++L +
Sbjct: 102 LFREGDVWICXELX-DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS--V 158
Query: 567 VHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGL--LTAHGSGAPEFESGSYS 624
+H + K SN+L++ V+ D G++ L ++ G A PE YS
Sbjct: 159 IHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDAGCKPYXAPERINPELNQKGYS 218
Query: 625 CQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDGAYL 684
+SD++SLG+ +EL R PYD W P L ++V+
Sbjct: 219 VKSDIWSLGITXIELAILRFPYD-----------SWGTP----FQQLKQVVEEPSPQLPA 263
Query: 685 AKSLSRFADIISRCVQWEPGFRPPMSEIVQ 714
K + F D S+C++ RP E+ Q
Sbjct: 264 DKFSAEFVDFTSQCLKKNSKERPTYPELXQ 293
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 102/219 (46%), Gaps = 24/219 (10%)
Query: 440 NSFSEGNFIGEGLLGSVY--KAELPGGKLL--AVKKLSNTVSQRQTDEEFLELASTISRL 495
+ S +G G G V + +LP K + A+K L +++Q +FL AS + +
Sbjct: 43 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR-RDFLGEASIMGQF 101
Query: 496 RHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARAL 555
H NI+ L G + ++V +Y N +L L + +F+ + + G A +
Sbjct: 102 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD---AQFTVIQLVGMLRGIASGM 158
Query: 556 QYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGA 615
+YL ++ VH + + NIL++ L+ +VSD GL+ +L + E T G
Sbjct: 159 KYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVL-----EDDPEAAYTTRGGKI 210
Query: 616 P-------EFESGSYSCQSDVYSLGVVMLELLT-GRKPY 646
P ++ SDV+S G+V+ E+++ G +PY
Sbjct: 211 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY 249
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 100/211 (47%), Gaps = 24/211 (11%)
Query: 448 IGEGLLGSVY--KAELPGGKLL--AVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVEL 503
+G G G V + +LP K + A+K L +++Q +FL AS + + H NI+ L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR-RDFLGEASIMGQFDHPNIIRL 111
Query: 504 IGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCE 563
G + ++V +Y N +L L + +F+ + + G A ++YL ++
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHD---AQFTVIQLVGMLRGIASGMKYLSDMG- 167
Query: 564 PPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAP------- 616
VH + + NIL++ L+ +VSD GL+ +L + E T G P
Sbjct: 168 --YVHRDLAARNILINSNLVCKVSDFGLSRVL-----EDDPEAAYTTRGGKIPIRWTSPE 220
Query: 617 EFESGSYSCQSDVYSLGVVMLELLT-GRKPY 646
++ SDV+S G+V+ E+++ G +PY
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEVMSYGERPY 251
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 100/211 (47%), Gaps = 24/211 (11%)
Query: 448 IGEGLLGSVY--KAELPGGKLL--AVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVEL 503
+G G G V + +LP K + A+K L +++Q +FL AS + + H NI+ L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR-RDFLGEASIMGQFDHPNIIRL 111
Query: 504 IGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCE 563
G + ++V +Y N +L L + +F+ + + G A ++YL ++
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHD---AQFTVIQLVGMLRGIASGMKYLSDMG- 167
Query: 564 PPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAP------- 616
VH + + NIL++ L+ +VSD GL+ +L + E T G P
Sbjct: 168 --YVHRDLAARNILINSNLVCKVSDFGLSRVL-----EDDPEAAYTTRGGKIPIRWTSPE 220
Query: 617 EFESGSYSCQSDVYSLGVVMLELLT-GRKPY 646
++ SDV+S G+V+ E+++ G +PY
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEVMSYGERPY 251
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 100/211 (47%), Gaps = 24/211 (11%)
Query: 448 IGEGLLGSVY--KAELPGGKLL--AVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVEL 503
+G G G V + +LP K + A+K L +++Q +FL AS + + H NI+ L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR-RDFLGEASIMGQFDHPNIIRL 111
Query: 504 IGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCE 563
G + ++V +Y N +L L + +F+ + + G A ++YL ++
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHD---AQFTVIQLVGMLRGIASGMKYLSDMG- 167
Query: 564 PPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAP------- 616
VH + + NIL++ L+ +VSD GL+ +L + E T G P
Sbjct: 168 --YVHRDLAARNILINSNLVCKVSDFGLSRVL-----EDDPEAAYTTRGGKIPIRWTSPE 220
Query: 617 EFESGSYSCQSDVYSLGVVMLELLT-GRKPY 646
++ SDV+S G+V+ E+++ G +PY
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEVMSYGERPY 251
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 99/211 (46%), Gaps = 24/211 (11%)
Query: 448 IGEGLLGSVY--KAELPGGKLL--AVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVEL 503
+G G G V + +LP K + A+K L +++Q +FL AS + + H NI+ L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR-RDFLGEASIMGQFDHPNIIRL 111
Query: 504 IGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCE 563
G + ++V +Y N +L L + +F+ + + G A ++YL ++
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHD---AQFTVIQLVGMLRGIASGMKYLSDMG- 167
Query: 564 PPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAP------- 616
VH + + NIL++ L+ +VSD GL +L + E T G P
Sbjct: 168 --YVHRDLAARNILINSNLVCKVSDFGLGRVL-----EDDPEAAYTTRGGKIPIRWTSPE 220
Query: 617 EFESGSYSCQSDVYSLGVVMLELLT-GRKPY 646
++ SDV+S G+V+ E+++ G +PY
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEVMSYGERPY 251
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 96/219 (43%), Gaps = 18/219 (8%)
Query: 436 QQYTNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISR 494
Q N +G G G V+K G ++AVK++ + ++ + ++L +
Sbjct: 21 QAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKS 80
Query: 495 LRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRV----ALG 550
IV+ G + + + G C E+ K+ I R+ +
Sbjct: 81 HDCPYIVQCFGTFITNTDVFIAMELMGTCA--------EKLKKRMQGPIPERILGKMTVA 132
Query: 551 AARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEG---L 607
+AL YL+E + ++H + K SNILLDE+ +++ D G++ L + S G
Sbjct: 133 IVKALYYLKE--KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGCAAY 190
Query: 608 LTAHGSGAPEFESGSYSCQSDVYSLGVVMLELLTGRKPY 646
+ P+ Y ++DV+SLG+ ++EL TG+ PY
Sbjct: 191 MAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPY 229
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 100/234 (42%), Gaps = 46/234 (19%)
Query: 448 IGEGLLGSVYKAELPG------GKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIV 501
IGEG G V++A PG ++AVK L S +F A+ ++ + NIV
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASA-DMQADFQREAALMAEFDNPNIV 113
Query: 502 ELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEE------AHKKFSWNIRIR--------- 546
+L+G C L+++Y L++ L S +H S R+
Sbjct: 114 KLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSC 173
Query: 547 -----VALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTN 601
+A A + YL E VH + + N L+ E ++V+++D GL S N
Sbjct: 174 AEQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGL-------SRN 223
Query: 602 ELSEGLLTAHGSGA-------PE-FESGSYSCQSDVYSLGVVMLELLT-GRKPY 646
S A G+ A PE Y+ +SDV++ GVV+ E+ + G +PY
Sbjct: 224 IYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPY 277
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 100/213 (46%), Gaps = 24/213 (11%)
Query: 446 NFIGEGLLGSVYKAEL--PGGK--LLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIV 501
IG G G V L PG + +A+K L + +Q +FL AS + + H NI+
Sbjct: 14 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQR-RDFLSEASIMGQFDHPNII 72
Query: 502 ELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEV 561
L G + +++ +Y N +L L ++ +F+ + + G ++YL ++
Sbjct: 73 HLEGVVTKCKPVMIITEYMENGSLDAFLRKND---GRFTVIQLVGMLRGIGSGMKYLSDM 129
Query: 562 CEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG------A 615
VH + + NIL++ L+ +VSD G++ +L + E T G A
Sbjct: 130 ---SYVHRDLAARNILVNSNLVCKVSDFGMSRVL-----EDDPEAAYTTRGGKIPIRWTA 181
Query: 616 PE-FESGSYSCQSDVYSLGVVMLELLT-GRKPY 646
PE ++ SDV+S G+VM E+++ G +PY
Sbjct: 182 PEAIAYRKFTSASDVWSYGIVMWEVMSYGERPY 214
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 100/213 (46%), Gaps = 24/213 (11%)
Query: 446 NFIGEGLLGSVYKAEL--PGGK--LLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIV 501
IG G G V L PG + +A+K L + +Q +FL AS + + H NI+
Sbjct: 20 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQR-RDFLSEASIMGQFDHPNII 78
Query: 502 ELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEV 561
L G + +++ +Y N +L L ++ +F+ + + G ++YL ++
Sbjct: 79 HLEGVVTKCKPVMIITEYMENGSLDAFLRKND---GRFTVIQLVGMLRGIGSGMKYLSDM 135
Query: 562 CEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG------A 615
VH + + NIL++ L+ +VSD G++ +L + E T G A
Sbjct: 136 ---SYVHRDLAARNILVNSNLVCKVSDFGMSRVL-----EDDPEAAYTTRGGKIPIRWTA 187
Query: 616 PE-FESGSYSCQSDVYSLGVVMLELLT-GRKPY 646
PE ++ SDV+S G+VM E+++ G +PY
Sbjct: 188 PEAIAYRKFTSASDVWSYGIVMWEVMSYGERPY 220
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 103/215 (47%), Gaps = 15/215 (6%)
Query: 440 NSFSEGNFIGEGLLGSVYKA-ELPGGKLL----AVKKLSNTVSQRQTDEEFLELASTISR 494
F + +G G G+VYK +P G+ + A+K+L S + ++E L+ A ++
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK-ANKEILDEAYVMAS 77
Query: 495 LRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARA 554
+ + ++ L+G C L++ C L + + ++ N +++A G
Sbjct: 78 VDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG---- 133
Query: 555 LQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG 614
+ YL++ +VH + + N+L+ V+++D GLA LL + +EG
Sbjct: 134 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 190
Query: 615 APE-FESGSYSCQSDVYSLGVVMLELLT-GRKPYD 647
A E Y+ QSDV+S GV + EL+T G KPYD
Sbjct: 191 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 225
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 103/215 (47%), Gaps = 15/215 (6%)
Query: 440 NSFSEGNFIGEGLLGSVYKA-ELPGGKLL----AVKKLSNTVSQRQTDEEFLELASTISR 494
F + +G G G+VYK +P G+ + A+K+L S + ++E L+ A ++
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK-ANKEILDEAYVMAS 74
Query: 495 LRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARA 554
+ + ++ L+G C L++ C L + + ++ N +++A G
Sbjct: 75 VDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG---- 130
Query: 555 LQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG 614
+ YL++ +VH + + N+L+ V+++D GLA LL + +EG
Sbjct: 131 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 187
Query: 615 APE-FESGSYSCQSDVYSLGVVMLELLT-GRKPYD 647
A E Y+ QSDV+S GV + EL+T G KPYD
Sbjct: 188 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 222
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 103/215 (47%), Gaps = 15/215 (6%)
Query: 440 NSFSEGNFIGEGLLGSVYKA-ELPGGKLL----AVKKLSNTVSQRQTDEEFLELASTISR 494
F + +G G G+VYK +P G+ + A+K+L S + ++E L+ A ++
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK-ANKEILDEAYVMAS 76
Query: 495 LRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARA 554
+ + ++ L+G C L++ C L + + ++ N +++A G
Sbjct: 77 VDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG---- 132
Query: 555 LQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG 614
+ YL++ +VH + + N+L+ V+++D GLA LL + +EG
Sbjct: 133 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 189
Query: 615 APE-FESGSYSCQSDVYSLGVVMLELLT-GRKPYD 647
A E Y+ QSDV+S GV + EL+T G KPYD
Sbjct: 190 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 103/215 (47%), Gaps = 15/215 (6%)
Query: 440 NSFSEGNFIGEGLLGSVYKA-ELPGGKLL----AVKKLSNTVSQRQTDEEFLELASTISR 494
F + +G G G+VYK +P G+ + A+K+L S + ++E L+ A ++
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK-ANKEILDEAYVMAS 73
Query: 495 LRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARA 554
+ + ++ L+G C L++ C L + + ++ N +++A G
Sbjct: 74 VDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG---- 129
Query: 555 LQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG 614
+ YL++ +VH + + N+L+ V+++D GLA LL + +EG
Sbjct: 130 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 615 APE-FESGSYSCQSDVYSLGVVMLELLT-GRKPYD 647
A E Y+ QSDV+S GV + EL+T G KPYD
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 103/215 (47%), Gaps = 15/215 (6%)
Query: 440 NSFSEGNFIGEGLLGSVYKA-ELPGGKLL----AVKKLSNTVSQRQTDEEFLELASTISR 494
F + +G G G+VYK +P G+ + A+K+L S + ++E L+ A ++
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK-ANKEILDEAYVMAS 75
Query: 495 LRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARA 554
+ + ++ L+G C L++ C L + + ++ N +++A G
Sbjct: 76 VDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG---- 131
Query: 555 LQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG 614
+ YL++ +VH + + N+L+ V+++D GLA LL + +EG
Sbjct: 132 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 615 APE-FESGSYSCQSDVYSLGVVMLELLT-GRKPYD 647
A E Y+ QSDV+S GV + EL+T G KPYD
Sbjct: 189 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 96/228 (42%), Gaps = 33/228 (14%)
Query: 445 GNFIGEGLLGSVYKAELPG--------GKLLAVKKLSNTVSQRQTDEEFLELASTISRLR 496
G +GEG G V AE G +AVK L + +++ + E+ +
Sbjct: 33 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 497 HGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIR------------ 544
H NI+ L+G C + G ++ +Y L + L + ++ +N
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDL 152
Query: 545 IRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLL-----FSGS 599
+ A AR ++YL +H + + N+L+ E +++++D GLA + + +
Sbjct: 153 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 209
Query: 600 TNELSEGLLTAHGSGAPEFESGSYSCQSDVYSLGVVMLELLT-GRKPY 646
TN G L Y+ QSDV+S GV++ E+ T G PY
Sbjct: 210 TN----GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 253
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 102/215 (47%), Gaps = 15/215 (6%)
Query: 440 NSFSEGNFIGEGLLGSVYKA-ELPGGKLL----AVKKLSNTVSQRQTDEEFLELASTISR 494
F + +G G G+VYK +P G+ + A+K+L S + ++E L+ A ++
Sbjct: 25 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK-ANKEILDEAYVMAS 83
Query: 495 LRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARA 554
+ + ++ L+G C L+ C L + + ++ N +++A G
Sbjct: 84 VDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG---- 139
Query: 555 LQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG 614
+ YL++ +VH + + N+L+ V+++D GLA LL + +EG
Sbjct: 140 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 196
Query: 615 APE-FESGSYSCQSDVYSLGVVMLELLT-GRKPYD 647
A E Y+ QSDV+S GV + EL+T G KPYD
Sbjct: 197 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 231
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 102/215 (47%), Gaps = 15/215 (6%)
Query: 440 NSFSEGNFIGEGLLGSVYKA-ELPGGKLL----AVKKLSNTVSQRQTDEEFLELASTISR 494
F + +G G G+VYK +P G+ + A+K+L S + ++E L+ A ++
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK-ANKEILDEAYVMAS 76
Query: 495 LRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARA 554
+ + ++ L+G C L+ C L + + ++ N +++A G
Sbjct: 77 VDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG---- 132
Query: 555 LQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG 614
+ YL++ +VH + + N+L+ V+++D GLA LL + +EG
Sbjct: 133 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 189
Query: 615 APE-FESGSYSCQSDVYSLGVVMLELLT-GRKPYD 647
A E Y+ QSDV+S GV + EL+T G KPYD
Sbjct: 190 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 102/215 (47%), Gaps = 15/215 (6%)
Query: 440 NSFSEGNFIGEGLLGSVYKA-ELPGGKLL----AVKKLSNTVSQRQTDEEFLELASTISR 494
F + +G G G+VYK +P G+ + A+K+L S + ++E L+ A ++
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK-ANKEILDEAYVMAS 80
Query: 495 LRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARA 554
+ + ++ L+G C L+ C L + + ++ N +++A G
Sbjct: 81 VDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG---- 136
Query: 555 LQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG 614
+ YL++ +VH + + N+L+ V+++D GLA LL + +EG
Sbjct: 137 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 193
Query: 615 APE-FESGSYSCQSDVYSLGVVMLELLT-GRKPYD 647
A E Y+ QSDV+S GV + EL+T G KPYD
Sbjct: 194 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 96/228 (42%), Gaps = 33/228 (14%)
Query: 445 GNFIGEGLLGSVYKAELPG--------GKLLAVKKLSNTVSQRQTDEEFLELASTISRLR 496
G +GEG G V AE G +AVK L + +++ + E+ +
Sbjct: 18 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 77
Query: 497 HGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIR------------ 544
H NI+ L+G C + G ++ +Y L + L + ++ +N
Sbjct: 78 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDL 137
Query: 545 IRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLL-----FSGS 599
+ A AR ++YL +H + + N+L+ E +++++D GLA + + +
Sbjct: 138 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 194
Query: 600 TNELSEGLLTAHGSGAPEFESGSYSCQSDVYSLGVVMLELLT-GRKPY 646
TN G L Y+ QSDV+S GV++ E+ T G PY
Sbjct: 195 TN----GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 238
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 102/215 (47%), Gaps = 15/215 (6%)
Query: 440 NSFSEGNFIGEGLLGSVYKA-ELPGGKLL----AVKKLSNTVSQRQTDEEFLELASTISR 494
F + +G G G+VYK +P G+ + A+K+L S + ++E L+ A ++
Sbjct: 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK-ANKEILDEAYVMAS 67
Query: 495 LRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARA 554
+ + ++ L+G C L+ C L + + ++ N +++A G
Sbjct: 68 VDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG---- 123
Query: 555 LQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG 614
+ YL++ +VH + + N+L+ V+++D GLA LL + +EG
Sbjct: 124 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 180
Query: 615 APE-FESGSYSCQSDVYSLGVVMLELLT-GRKPYD 647
A E Y+ QSDV+S GV + EL+T G KPYD
Sbjct: 181 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 215
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 102/215 (47%), Gaps = 15/215 (6%)
Query: 440 NSFSEGNFIGEGLLGSVYKA-ELPGGKLL----AVKKLSNTVSQRQTDEEFLELASTISR 494
F + +G G G+VYK +P G+ + A+K+L S + ++E L+ A ++
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK-ANKEILDEAYVMAS 76
Query: 495 LRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARA 554
+ + ++ L+G C L+ C L + + ++ N +++A G
Sbjct: 77 VDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG---- 132
Query: 555 LQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG 614
+ YL++ +VH + + N+L+ V+++D GLA LL + +EG
Sbjct: 133 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 189
Query: 615 APE-FESGSYSCQSDVYSLGVVMLELLT-GRKPYD 647
A E Y+ QSDV+S GV + EL+T G KPYD
Sbjct: 190 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 101/215 (46%), Gaps = 15/215 (6%)
Query: 440 NSFSEGNFIGEGLLGSVYKA-ELPGGKLL----AVKKLSNTVSQRQTDEEFLELASTISR 494
F + +G G G+VYK +P G+ + A+K+L S + ++E L+ A ++
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK-ANKEILDEAYVMAS 73
Query: 495 LRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARA 554
+ + ++ L+G C L+ C L + + ++ N +++A G
Sbjct: 74 VDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG---- 129
Query: 555 LQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSE-GLLTAHGS 613
+ YL++ +VH + + N+L+ V+++D GLA LL + +E G +
Sbjct: 130 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 614 GAPEFESGSYSCQSDVYSLGVVMLELLT-GRKPYD 647
Y+ QSDV+S GV + EL+T G KPYD
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 102/215 (47%), Gaps = 15/215 (6%)
Query: 440 NSFSEGNFIGEGLLGSVYKA-ELPGGKLL----AVKKLSNTVSQRQTDEEFLELASTISR 494
F + +G G G+VYK +P G+ + A+K+L S + ++E L+ A ++
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK-ANKEILDEAYVMAS 75
Query: 495 LRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARA 554
+ + ++ L+G C L+ C L + + ++ N +++A G
Sbjct: 76 VDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG---- 131
Query: 555 LQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG 614
+ YL++ +VH + + N+L+ V+++D GLA LL + +EG
Sbjct: 132 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 615 APE-FESGSYSCQSDVYSLGVVMLELLT-GRKPYD 647
A E Y+ QSDV+S GV + EL+T G KPYD
Sbjct: 189 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 102/215 (47%), Gaps = 15/215 (6%)
Query: 440 NSFSEGNFIGEGLLGSVYKA-ELPGGKLL----AVKKLSNTVSQRQTDEEFLELASTISR 494
F + +G G G+VYK +P G+ + A+K+L S + ++E L+ A ++
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK-ANKEILDEAYVMAS 73
Query: 495 LRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARA 554
+ + ++ L+G C L+ C L + + ++ N +++A G
Sbjct: 74 VDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG---- 129
Query: 555 LQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG 614
+ YL++ +VH + + N+L+ V+++D GLA LL + +EG
Sbjct: 130 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 615 APE-FESGSYSCQSDVYSLGVVMLELLT-GRKPYD 647
A E Y+ QSDV+S GV + EL+T G KPYD
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 102/215 (47%), Gaps = 15/215 (6%)
Query: 440 NSFSEGNFIGEGLLGSVYKA-ELPGGKLL----AVKKLSNTVSQRQTDEEFLELASTISR 494
F + +G G G+VYK +P G+ + A+K+L S + ++E L+ A ++
Sbjct: 40 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK-ANKEILDEAYVMAS 98
Query: 495 LRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARA 554
+ + ++ L+G C L+ C L + + ++ N +++A G
Sbjct: 99 VDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG---- 154
Query: 555 LQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG 614
+ YL++ +VH + + N+L+ V+++D GLA LL + +EG
Sbjct: 155 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 211
Query: 615 APE-FESGSYSCQSDVYSLGVVMLELLT-GRKPYD 647
A E Y+ QSDV+S GV + EL+T G KPYD
Sbjct: 212 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 246
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 102/215 (47%), Gaps = 15/215 (6%)
Query: 440 NSFSEGNFIGEGLLGSVYKA-ELPGGKLL----AVKKLSNTVSQRQTDEEFLELASTISR 494
F + +G G G+VYK +P G+ + A+K+L S + ++E L+ A ++
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK-ANKEILDEAYVMAS 76
Query: 495 LRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARA 554
+ + ++ L+G C L+ C L + + ++ N +++A G
Sbjct: 77 VDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG---- 132
Query: 555 LQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG 614
+ YL++ +VH + + N+L+ V+++D GLA LL + +EG
Sbjct: 133 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 189
Query: 615 APE-FESGSYSCQSDVYSLGVVMLELLT-GRKPYD 647
A E Y+ QSDV+S GV + EL+T G KPYD
Sbjct: 190 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 103/213 (48%), Gaps = 28/213 (13%)
Query: 448 IGEGLLGSVY--KAELPGGKLLAVK----KLSNTVSQRQTDEEFLELASTISRLRHGNIV 501
IG G G V + +LPG + +AV K+ T QR+ +FL AS + + H N+V
Sbjct: 51 IGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRR---DFLCEASIMGQFDHPNVV 107
Query: 502 ELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEV 561
L G ++V ++ N L L + +F+ + + G A ++YL ++
Sbjct: 108 HLEGVVTRGKPVMIVIEFMENGALDAFLRKHD---GQFTVIQLVGMLRGIAAGMRYLADM 164
Query: 562 CEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG------A 615
VH + + NIL++ L+ +VSD GL+ ++ + E + T G A
Sbjct: 165 G---YVHRDLAARNILVNSNLVCKVSDFGLSRVI-----EDDPEAVYTTTGGKIPVRWTA 216
Query: 616 PE-FESGSYSCQSDVYSLGVVMLELLT-GRKPY 646
PE + ++ SDV+S G+VM E+++ G +PY
Sbjct: 217 PEAIQYRKFTSASDVWSYGIVMWEVMSYGERPY 249
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 102/215 (47%), Gaps = 15/215 (6%)
Query: 440 NSFSEGNFIGEGLLGSVYKA-ELPGGKLL----AVKKLSNTVSQRQTDEEFLELASTISR 494
F + +G G G+VYK +P G+ + A+K+L S + ++E L+ A ++
Sbjct: 21 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK-ANKEILDEAYVMAS 79
Query: 495 LRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARA 554
+ + ++ L+G C L+ C L + + ++ N +++A G
Sbjct: 80 VDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG---- 135
Query: 555 LQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG 614
+ YL++ +VH + + N+L+ V+++D GLA LL + +EG
Sbjct: 136 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 192
Query: 615 APE-FESGSYSCQSDVYSLGVVMLELLT-GRKPYD 647
A E Y+ QSDV+S GV + EL+T G KPYD
Sbjct: 193 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 227
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 95/203 (46%), Gaps = 15/203 (7%)
Query: 448 IGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYC 507
+G G G V+ +AVK L Q FLE A+ + L+H +V L
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQA---FLEEANLMKTLQHDKLVRLYAVV 76
Query: 508 NEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIV 567
+ ++ ++ +L D L SDE K I + A + Y++ +
Sbjct: 77 TKEEPIYIITEFMAKGSLLDFLKSDEGG--KVLLPKLIDFSAQIAEGMAYIER---KNYI 131
Query: 568 HGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELS--EGLLTAHGSGAPE-FESGSYS 624
H + +++N+L+ E L+ +++D GLA ++ NE + EG APE G ++
Sbjct: 132 HRDLRAANVLVSESLMCKIADFGLARVI---EDNEYTAREGAKFPIKWTAPEAINFGCFT 188
Query: 625 CQSDVYSLGVVMLELLT-GRKPY 646
+S+V+S G+++ E++T G+ PY
Sbjct: 189 IKSNVWSFGILLYEIVTYGKIPY 211
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 102/215 (47%), Gaps = 15/215 (6%)
Query: 440 NSFSEGNFIGEGLLGSVYKA-ELPGGKLL----AVKKLSNTVSQRQTDEEFLELASTISR 494
F + +G G G+VYK +P G+ + A+K+L S + ++E L+ A ++
Sbjct: 12 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK-ANKEILDEAYVMAS 70
Query: 495 LRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARA 554
+ + ++ L+G C L+ C L + + ++ N +++A G
Sbjct: 71 VDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAEG---- 126
Query: 555 LQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG 614
+ YL++ +VH + + N+L+ V+++D GLA LL + +EG
Sbjct: 127 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 183
Query: 615 APE-FESGSYSCQSDVYSLGVVMLELLT-GRKPYD 647
A E Y+ QSDV+S GV + EL+T G KPYD
Sbjct: 184 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 218
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 100/206 (48%), Gaps = 17/206 (8%)
Query: 448 IGEGLLG-SVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGY 506
IGEG G ++ G+ +K+++ + + EE + ++ ++H NIV+
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRES 91
Query: 507 CNEHGQHLLVYDYGGNCTLHDLLHSDE----EAHKKFSWNIRIRVALGAARALQYLQEVC 562
E+G +V DY L +++ + + + W ++I +AL + V
Sbjct: 92 FEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLAL---------KHVH 142
Query: 563 EPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEF-ESG 621
+ I+H + KS NI L + V++ D G+A +L ST EL+ + +PE E+
Sbjct: 143 DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVL--NSTVELARACIGTPYYLSPEICENK 200
Query: 622 SYSCQSDVYSLGVVMLELLTGRKPYD 647
Y+ +SD+++LG V+ EL T + ++
Sbjct: 201 PYNNKSDIWALGCVLYELCTLKHAFE 226
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 94/212 (44%), Gaps = 26/212 (12%)
Query: 445 GNFIGEGLLGSVYKA-ELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVEL 503
G +G+G G K G+++ +K+L +T FL+ + L H N+++
Sbjct: 15 GEVLGKGCFGQAIKVTHRETGEVMVMKELIRF--DEETQRTFLKEVKVMRCLEHPNVLKF 72
Query: 504 IGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCE 563
IG + + + +Y TL ++ S + ++ W+ R+ A A + YL +
Sbjct: 73 IGVLYKDKRLNFITEYIKGGTLRGIIKSMDS---QYPWSQRVSFAKDIASGMAYLHSM-- 127
Query: 564 PPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG--------- 614
I+H + S N L+ E V V+D GLA L+ T EGL +
Sbjct: 128 -NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQ--PEGLRSLKKPDRKKRYTVVG 184
Query: 615 -----APEFESG-SYSCQSDVYSLGVVMLELL 640
APE +G SY + DV+S G+V+ E++
Sbjct: 185 NPYWMAPEMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 104/219 (47%), Gaps = 24/219 (10%)
Query: 445 GNFIGEGLLGSVYKAELP---GGKL-LAVK--KLSNTVSQRQTDEEFLELASTISRLRHG 498
G +GEG GSV + L G L +AVK KL N+ SQR+ EEFL A+ + H
Sbjct: 39 GKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNS-SQREI-EEFLSEAACMKDFSHP 96
Query: 499 NIVELIGYCNEHGQH-----LLVYDYGGNCTLHD-LLHSD-EEAHKKFSWNIRIRVALGA 551
N++ L+G C E +++ + LH LL+S E K ++ +
Sbjct: 97 NVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDI 156
Query: 552 ARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAH 611
A ++YL +H + + N +L + + V V+D GL+ ++SG + +G +
Sbjct: 157 ALGMEYLS---NRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSG--DYYRQGRIAKM 211
Query: 612 GSGAPEFESGS---YSCQSDVYSLGVVMLELLT-GRKPY 646
ES + Y+ +SDV++ GV M E+ T G PY
Sbjct: 212 PVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPY 250
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 102/215 (47%), Gaps = 15/215 (6%)
Query: 440 NSFSEGNFIGEGLLGSVYKA-ELPGGKLL----AVKKLSNTVSQRQTDEEFLELASTISR 494
F + +G G G+VYK +P G+ + A+K+L S + ++E L+ A ++
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK-ANKEILDEAYVMAS 77
Query: 495 LRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARA 554
+ + ++ L+G C L++ C L + + ++ N +++A G
Sbjct: 78 VDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG---- 133
Query: 555 LQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG 614
+ YL++ +VH + + N+L+ V+++D G A LL + +EG
Sbjct: 134 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 190
Query: 615 APE-FESGSYSCQSDVYSLGVVMLELLT-GRKPYD 647
A E Y+ QSDV+S GV + EL+T G KPYD
Sbjct: 191 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 225
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 102/215 (47%), Gaps = 15/215 (6%)
Query: 440 NSFSEGNFIGEGLLGSVYKA-ELPGGKLL----AVKKLSNTVSQRQTDEEFLELASTISR 494
F + +G G G+VYK +P G+ + A+K+L S + ++E L+ A ++
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK-ANKEILDEAYVMAS 75
Query: 495 LRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARA 554
+ + ++ L+G C L++ C L + + ++ N +++A G
Sbjct: 76 VDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG---- 131
Query: 555 LQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG 614
+ YL++ +VH + + N+L+ V+++D G A LL + +EG
Sbjct: 132 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 615 APE-FESGSYSCQSDVYSLGVVMLELLT-GRKPYD 647
A E Y+ QSDV+S GV + EL+T G KPYD
Sbjct: 189 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 99/211 (46%), Gaps = 24/211 (11%)
Query: 448 IGEGLLGSVY--KAELPGGKLL--AVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVEL 503
+G G G V + +LP K + A+K L +++Q +FL AS + + H NI+ L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR-RDFLGEASIMGQFDHPNIIRL 111
Query: 504 IGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCE 563
G + ++V + N +L L + +F+ + + G A ++YL ++
Sbjct: 112 EGVVTKSKPVMIVTEXMENGSLDSFLRKHD---AQFTVIQLVGMLRGIASGMKYLSDMGA 168
Query: 564 PPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAP------- 616
VH + + NIL++ L+ +VSD GL+ +L + E T G P
Sbjct: 169 ---VHRDLAARNILINSNLVCKVSDFGLSRVL-----EDDPEAAYTTRGGKIPIRWTSPE 220
Query: 617 EFESGSYSCQSDVYSLGVVMLELLT-GRKPY 646
++ SDV+S G+V+ E+++ G +PY
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEVMSYGERPY 251
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 102/215 (47%), Gaps = 15/215 (6%)
Query: 440 NSFSEGNFIGEGLLGSVYKA-ELPGGKLL----AVKKLSNTVSQRQTDEEFLELASTISR 494
F + +G G G+VYK +P G+ + A+K+L S + ++E L+ A ++
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK-ANKEILDEAYVMAS 75
Query: 495 LRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARA 554
+ + ++ L+G C L++ C L + + ++ N +++A G
Sbjct: 76 VDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG---- 131
Query: 555 LQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG 614
+ YL++ +VH + + N+L+ V+++D G A LL + +EG
Sbjct: 132 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 615 APE-FESGSYSCQSDVYSLGVVMLELLT-GRKPYD 647
A E Y+ QSDV+S GV + EL+T G KPYD
Sbjct: 189 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 102/215 (47%), Gaps = 15/215 (6%)
Query: 440 NSFSEGNFIGEGLLGSVYKA-ELPGGKLL----AVKKLSNTVSQRQTDEEFLELASTISR 494
F + + G G+VYK +P G+ + A+K+L S + ++E L+ A ++
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK-ANKEILDEAYVMAS 80
Query: 495 LRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARA 554
+ + ++ L+G C L++ C L + + ++ N +++A G
Sbjct: 81 VDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG---- 136
Query: 555 LQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG 614
+ YL++ +VH + + N+L+ V+++D GLA LL + +EG
Sbjct: 137 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 193
Query: 615 APE-FESGSYSCQSDVYSLGVVMLELLT-GRKPYD 647
A E Y+ QSDV+S GV + EL+T G KPYD
Sbjct: 194 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 101/219 (46%), Gaps = 24/219 (10%)
Query: 440 NSFSEGNFIGEGLLGSVY--KAELPGGKLL--AVKKLSNTVSQRQTDEEFLELASTISRL 495
+ S +G G G V + +LP K + A+K L +++Q +FL AS + +
Sbjct: 16 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR-RDFLGEASIMGQF 74
Query: 496 RHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARAL 555
H NI+ L G + ++V + N +L L + +F+ + + G A +
Sbjct: 75 DHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHD---AQFTVIQLVGMLRGIASGM 131
Query: 556 QYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGA 615
+YL ++ VH + + NIL++ L+ +VSD GL+ +L + E T G
Sbjct: 132 KYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVL-----EDDPEAAYTTRGGKI 183
Query: 616 P-------EFESGSYSCQSDVYSLGVVMLELLT-GRKPY 646
P ++ SDV+S G+V+ E+++ G +PY
Sbjct: 184 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY 222
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 99/211 (46%), Gaps = 24/211 (11%)
Query: 448 IGEGLLGSVY--KAELPGGKLL--AVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVEL 503
+G G G V + +LP K + A+K L +++Q +FL AS + + H NI+ L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR-RDFLGEASIMGQFDHPNIIRL 111
Query: 504 IGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCE 563
G + ++V + N +L L + +F+ + + G A ++YL ++
Sbjct: 112 EGVVTKSKPVMIVTEXMENGSLDSFLRKHD---AQFTVIQLVGMLRGIASGMKYLSDMG- 167
Query: 564 PPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAP------- 616
VH + + NIL++ L+ +VSD GL+ +L + E T G P
Sbjct: 168 --YVHRDLAARNILINSNLVCKVSDFGLSRVL-----EDDPEAAYTTRGGKIPIRWTSPE 220
Query: 617 EFESGSYSCQSDVYSLGVVMLELLT-GRKPY 646
++ SDV+S G+V+ E+++ G +PY
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEVMSYGERPY 251
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 96/210 (45%), Gaps = 19/210 (9%)
Query: 445 GNFIGEGLLGSVYKA-----ELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGN 499
G IGEG G V++ E P + A+K N S E+FL+ A T+ + H +
Sbjct: 15 GRCIGEGQFGDVHQGIYMSPENPAMAV-AIKTCKNCTSD-SVREKFLQEALTMRQFDHPH 72
Query: 500 IVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIR--IRVALGAARALQY 557
IV+LIG E+ V+ CTL +L + +KFS ++ I A + AL Y
Sbjct: 73 IVKLIGVITENP----VWIIMELCTLGELRSFLQV--RKFSLDLASLILYAYQLSTALAY 126
Query: 558 LQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPE 617
L+ VH + + N+L+ V++ D GL+ + + + S+G L
Sbjct: 127 LES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPES 183
Query: 618 FESGSYSCQSDVYSLGVVMLELLT-GRKPY 646
++ SDV+ GV M E+L G KP+
Sbjct: 184 INFRRFTSASDVWMFGVCMWEILMHGVKPF 213
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 101/215 (46%), Gaps = 15/215 (6%)
Query: 440 NSFSEGNFIGEGLLGSVYKA-ELPGGKLL----AVKKLSNTVSQRQTDEEFLELASTISR 494
F + +G G G+VYK +P G+ + A+K+L S + ++E L+ A ++
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK-ANKEILDEAYVMAS 80
Query: 495 LRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARA 554
+ + ++ L+G C L+ C L + + ++ N +++A G
Sbjct: 81 VDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG---- 136
Query: 555 LQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG 614
+ YL++ +VH + + N+L+ V+++D G A LL + +EG
Sbjct: 137 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 193
Query: 615 APE-FESGSYSCQSDVYSLGVVMLELLT-GRKPYD 647
A E Y+ QSDV+S GV + EL+T G KPYD
Sbjct: 194 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 101/215 (46%), Gaps = 15/215 (6%)
Query: 440 NSFSEGNFIGEGLLGSVYKA-ELPGGKLL----AVKKLSNTVSQRQTDEEFLELASTISR 494
F + +G G G+VYK +P G+ + A+K+L S + ++E L+ A ++
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK-ANKEILDEAYVMAS 75
Query: 495 LRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARA 554
+ + ++ L+G C L+ C L + + ++ N +++A G
Sbjct: 76 VDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG---- 131
Query: 555 LQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG 614
+ YL++ +VH + + N+L+ V+++D G A LL + +EG
Sbjct: 132 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 615 APE-FESGSYSCQSDVYSLGVVMLELLT-GRKPYD 647
A E Y+ QSDV+S GV + EL+T G KPYD
Sbjct: 189 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 101/215 (46%), Gaps = 15/215 (6%)
Query: 440 NSFSEGNFIGEGLLGSVYKA-ELPGGKLL----AVKKLSNTVSQRQTDEEFLELASTISR 494
F + +G G G+VYK +P G+ + A+K+L S + ++E L+ A ++
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK-ANKEILDEAYVMAS 73
Query: 495 LRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARA 554
+ + ++ L+G C L+ C L + + ++ N +++A G
Sbjct: 74 VDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG---- 129
Query: 555 LQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG 614
+ YL++ +VH + + N+L+ V+++D G A LL + +EG
Sbjct: 130 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 615 APE-FESGSYSCQSDVYSLGVVMLELLT-GRKPYD 647
A E Y+ QSDV+S GV + EL+T G KPYD
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 100/215 (46%), Gaps = 15/215 (6%)
Query: 440 NSFSEGNFIGEGLLGSVYKA-ELPGGKLL----AVKKLSNTVSQRQTDEEFLELASTISR 494
F + + G G+VYK +P G+ + A+K+L S + ++E L+ A ++
Sbjct: 15 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK-ANKEILDEAYVMAS 73
Query: 495 LRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARA 554
+ + ++ L+G C L+ C L + + ++ N +++A G
Sbjct: 74 VDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG---- 129
Query: 555 LQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSE-GLLTAHGS 613
+ YL++ +VH + + N+L+ V+++D GLA LL + +E G +
Sbjct: 130 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 614 GAPEFESGSYSCQSDVYSLGVVMLELLT-GRKPYD 647
Y+ QSDV+S GV + EL+T G KPYD
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 101/229 (44%), Gaps = 31/229 (13%)
Query: 437 QYTNSFSEGNFIGEGLLGSVYKAE-LPGGKLLAVKKLSNTVSQRQTD-EEFLELAST--- 491
+Y + F E +G+G G V KA + A+KK+ +T + T E + LAS
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQ 62
Query: 492 -ISR-----LRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRI 545
+ R L N V+ + + + +Y N TL+DL+HS+ ++ +
Sbjct: 63 YVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLF 122
Query: 546 RVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLL---------- 595
R L A L + I+H + K NI +DE V++ D GLA +
Sbjct: 123 RQILEA------LSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLD 176
Query: 596 ---FSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELL 640
GS++ L+ + TA + +G Y+ + D+YSLG++ E++
Sbjct: 177 SQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 100/215 (46%), Gaps = 15/215 (6%)
Query: 440 NSFSEGNFIGEGLLGSVYKA-ELPGGKLL----AVKKLSNTVSQRQTDEEFLELASTISR 494
F + +G G G+VYK +P G+ + A+ +L S + ++E L+ A ++
Sbjct: 49 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPK-ANKEILDEAYVMAS 107
Query: 495 LRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARA 554
+ + ++ L+G C L+ C L + + ++ N +++A G
Sbjct: 108 VDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG---- 163
Query: 555 LQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSE-GLLTAHGS 613
+ YL++ +VH + + N+L+ V+++D GLA LL + +E G +
Sbjct: 164 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 220
Query: 614 GAPEFESGSYSCQSDVYSLGVVMLELLT-GRKPYD 647
Y+ QSDV+S GV + EL+T G KPYD
Sbjct: 221 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 255
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 101/215 (46%), Gaps = 15/215 (6%)
Query: 440 NSFSEGNFIGEGLLGSVYKA-ELPGGKLL----AVKKLSNTVSQRQTDEEFLELASTISR 494
F + + G G+VYK +P G+ + A+K+L S + ++E L+ A ++
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK-ANKEILDEAYVMAS 80
Query: 495 LRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARA 554
+ + ++ L+G C L+ C L + + ++ N +++A G
Sbjct: 81 VDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG---- 136
Query: 555 LQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG 614
+ YL++ +VH + + N+L+ V+++D GLA LL + +EG
Sbjct: 137 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 193
Query: 615 APE-FESGSYSCQSDVYSLGVVMLELLT-GRKPYD 647
A E Y+ QSDV+S GV + EL+T G KPYD
Sbjct: 194 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 100/229 (43%), Gaps = 31/229 (13%)
Query: 437 QYTNSFSEGNFIGEGLLGSVYKAE-LPGGKLLAVKKLSNTVSQRQTD-EEFLELAST--- 491
+Y + F E +G+G G V KA + A+KK+ +T + T E + LAS
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQ 62
Query: 492 ------ISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRI 545
+ L N V+ + + + +Y N TL+DL+HS+ ++ +
Sbjct: 63 YVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLF 122
Query: 546 RVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLL---------- 595
R L A L + I+H + K NI +DE V++ D GLA +
Sbjct: 123 RQILEA------LSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLD 176
Query: 596 ---FSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELL 640
GS++ L+ + TA + +G Y+ + D+YSLG++ E++
Sbjct: 177 SQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 98/218 (44%), Gaps = 24/218 (11%)
Query: 448 IGEGLLGSVYKAE----LP--GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIV 501
+GEG G V+ AE LP L+AVK L + D F A ++ L+H +IV
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQD--FQREAELLTMLQHQHIV 83
Query: 502 ELIGYCNEHGQHLLVYDYGGNCTLHDLLHS-----------DEEAHKKFSWNIRIRVALG 550
G C E L+V++Y + L+ L S ++ A + VA
Sbjct: 84 RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 143
Query: 551 AARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTA 610
A + YL + VH + + N L+ + L+V++ D G++ ++S + +
Sbjct: 144 VAAGMVYLAGL---HFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLP 200
Query: 611 HGSGAPE-FESGSYSCQSDVYSLGVVMLELLT-GRKPY 646
PE ++ +SDV+S GVV+ E+ T G++P+
Sbjct: 201 IRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPW 238
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 110/225 (48%), Gaps = 19/225 (8%)
Query: 430 FTIASLQQYTNSFSEGNFIGEGLLGSVY--KAELPGGKLLAVKKLSNTVSQRQTDEE-FL 486
F S +++ + +G+G G V K ++ G + AVK +S +++TD+E L
Sbjct: 22 FVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQEC-AVKVISKRQVKQKTDKESLL 80
Query: 487 ELASTISRLRHGNIVELIGYCNEHGQHLLVYD-YGGNCTLHDLLHSDEEAHKKFSWNIRI 545
+ +L H NI++L + + G LV + Y G +++ + K+FS
Sbjct: 81 REVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEII-----SRKRFSEVDAA 135
Query: 546 RVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLI---VRVSDCGLAPLLFSGSTNE 602
R+ + Y+ + IVH + K N+LL+ K +R+ D GL+ ++ +
Sbjct: 136 RIIRQVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF--EASKK 190
Query: 603 LSEGLLTAHGSGAPEFESGSYSCQSDVYSLGVVMLELLTGRKPYD 647
+ + + TA+ APE G+Y + DV+S GV++ LL+G P++
Sbjct: 191 MKDKIGTAYYI-APEVLHGTYDEKCDVWSTGVILYILLSGCPPFN 234
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 98/218 (44%), Gaps = 24/218 (11%)
Query: 448 IGEGLLGSVYKAE----LP--GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIV 501
+GEG G V+ AE LP L+AVK L + D F A ++ L+H +IV
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQD--FQREAELLTMLQHQHIV 77
Query: 502 ELIGYCNEHGQHLLVYDYGGNCTLHDLLHS-----------DEEAHKKFSWNIRIRVALG 550
G C E L+V++Y + L+ L S ++ A + VA
Sbjct: 78 RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 137
Query: 551 AARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTA 610
A + YL + VH + + N L+ + L+V++ D G++ ++S + +
Sbjct: 138 VAAGMVYLAGL---HFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLP 194
Query: 611 HGSGAPE-FESGSYSCQSDVYSLGVVMLELLT-GRKPY 646
PE ++ +SDV+S GVV+ E+ T G++P+
Sbjct: 195 IRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPW 232
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 103/226 (45%), Gaps = 23/226 (10%)
Query: 448 IGEGLLGSVYKAELPGGKLLAVKKLSNTV-----SQRQTDEEFLELASTISRLRHGNIVE 502
+G G + +VY AE +L +K + + +T + F S+L H NIV
Sbjct: 19 LGGGGMSTVYLAE---DTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVS 75
Query: 503 LIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVC 562
+I E + LV +Y TL + + E+H S + I + L ++
Sbjct: 76 MIDVDEEDDCYYLVMEYIEGPTLSEYI----ESHGPLSVDTAINFT---NQILDGIKHAH 128
Query: 563 EPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFESGS 622
+ IVH + K NIL+D +++ D G+A L S + + L T +PE G
Sbjct: 129 DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQ-YFSPEQAKGE 187
Query: 623 YSCQ-SDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHD 667
+ + +D+YS+G+V+ E+L G P++ GE + V AI + D
Sbjct: 188 ATDECTDIYSIGIVLYEMLVGEPPFN-----GETA-VSIAIKHIQD 227
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 99/216 (45%), Gaps = 22/216 (10%)
Query: 448 IGEGLLGSVYKAEL------PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIV 501
+GEG G V+ AE L+AVK L + + D F A ++ L+H +IV
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKD--FHREAELLTNLQHEHIV 78
Query: 502 ELIGYCNEHGQHLLVYDYGGNCTLHDLLH---------SDEEAHKKFSWNIRIRVALGAA 552
+ G C E ++V++Y + L+ L ++ + + + + +A A
Sbjct: 79 KFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIA 138
Query: 553 RALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHG 612
+ YL VH + + N L+ E L+V++ D G++ ++S + +
Sbjct: 139 AGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIR 195
Query: 613 SGAPE-FESGSYSCQSDVYSLGVVMLELLT-GRKPY 646
PE ++ +SDV+SLGVV+ E+ T G++P+
Sbjct: 196 WMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPW 231
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 121/287 (42%), Gaps = 26/287 (9%)
Query: 440 NSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHG 498
+ + IG G V A P + +A+K+++ Q DE E+ + +S+ H
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQA-MSQCHHP 68
Query: 499 NIVEL-IGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQY 557
NIV + + L++ G L + H + K +A L+
Sbjct: 69 NIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEG 128
Query: 558 LQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSG---STNELSEGLLTAHGSG 614
L+ + + +H + K+ NILL E V+++D G++ L +G + N++ + +
Sbjct: 129 LEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWM 188
Query: 615 APEF--ESGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALS 672
APE + Y ++D++S G+ +EL TG PY + P L P
Sbjct: 189 APEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDP--------- 239
Query: 673 RMVDPSL-----DGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQ 714
PSL D L K F +IS C+Q +P RP +E+++
Sbjct: 240 ----PSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 282
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 96/210 (45%), Gaps = 19/210 (9%)
Query: 445 GNFIGEGLLGSVYKA-----ELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGN 499
G IGEG G V++ E P + A+K N S E+FL+ A T+ + H +
Sbjct: 15 GRCIGEGQFGDVHQGIYMSPENPAMAV-AIKTCKNCTSD-SVREKFLQEALTMRQFDHPH 72
Query: 500 IVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIR--IRVALGAARALQY 557
IV+LIG E+ V+ CTL +L + +KFS ++ I A + AL Y
Sbjct: 73 IVKLIGVITENP----VWIIMELCTLGELRSFLQV--RKFSLDLASLILYAYQLSTALAY 126
Query: 558 LQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPE 617
L+ VH + + N+L+ V++ D GL+ + + + S+G L
Sbjct: 127 LES---KRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES 183
Query: 618 FESGSYSCQSDVYSLGVVMLELLT-GRKPY 646
++ SDV+ GV M E+L G KP+
Sbjct: 184 INFRRFTSASDVWMFGVCMWEILMHGVKPF 213
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 110/225 (48%), Gaps = 19/225 (8%)
Query: 430 FTIASLQQYTNSFSEGNFIGEGLLGSVY--KAELPGGKLLAVKKLSNTVSQRQTDEE-FL 486
F S +++ + +G+G G V K ++ G + AVK +S +++TD+E L
Sbjct: 16 FVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQEC-AVKVISKRQVKQKTDKESLL 74
Query: 487 ELASTISRLRHGNIVELIGYCNEHGQHLLVYD-YGGNCTLHDLLHSDEEAHKKFSWNIRI 545
+ +L H NI++L + + G LV + Y G +++ + K+FS
Sbjct: 75 REVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEII-----SRKRFSEVDAA 129
Query: 546 RVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLI---VRVSDCGLAPLLFSGSTNE 602
R+ + Y+ + IVH + K N+LL+ K +R+ D GL+ ++ +
Sbjct: 130 RIIRQVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF--EASKK 184
Query: 603 LSEGLLTAHGSGAPEFESGSYSCQSDVYSLGVVMLELLTGRKPYD 647
+ + + TA+ APE G+Y + DV+S GV++ LL+G P++
Sbjct: 185 MKDKIGTAYYI-APEVLHGTYDEKCDVWSTGVILYILLSGCPPFN 228
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 98/218 (44%), Gaps = 24/218 (11%)
Query: 448 IGEGLLGSVYKAE----LP--GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIV 501
+GEG G V+ AE LP L+AVK L + D F A ++ L+H +IV
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQD--FQREAELLTMLQHQHIV 106
Query: 502 ELIGYCNEHGQHLLVYDYGGNCTLHDLLHS-----------DEEAHKKFSWNIRIRVALG 550
G C E L+V++Y + L+ L S ++ A + VA
Sbjct: 107 RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 166
Query: 551 AARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTA 610
A + YL + VH + + N L+ + L+V++ D G++ ++S + +
Sbjct: 167 VAAGMVYLAGL---HFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLP 223
Query: 611 HGSGAPE-FESGSYSCQSDVYSLGVVMLELLT-GRKPY 646
PE ++ +SDV+S GVV+ E+ T G++P+
Sbjct: 224 IRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPW 261
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 121/287 (42%), Gaps = 26/287 (9%)
Query: 440 NSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHG 498
+ + IG G V A P + +A+K+++ Q DE E+ + +S+ H
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQA-MSQCHHP 73
Query: 499 NIVEL-IGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQY 557
NIV + + L++ G L + H + K +A L+
Sbjct: 74 NIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEG 133
Query: 558 LQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSG---STNELSEGLLTAHGSG 614
L+ + + +H + K+ NILL E V+++D G++ L +G + N++ + +
Sbjct: 134 LEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWM 193
Query: 615 APEF--ESGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALS 672
APE + Y ++D++S G+ +EL TG PY + P L P
Sbjct: 194 APEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDP--------- 244
Query: 673 RMVDPSL-----DGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQ 714
PSL D L K F +IS C+Q +P RP +E+++
Sbjct: 245 ----PSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 287
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 103/221 (46%), Gaps = 24/221 (10%)
Query: 448 IGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYC 507
+G G G V+ A +AVK + + E FL A+ + L+H +V+L
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTMK---PGSMSVEAFLAEANVMKTLQHDKLVKLHAVV 246
Query: 508 NEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIV 567
+ +++ ++ +L D L SDE + + I + A + + +
Sbjct: 247 TKEPIYIIT-EFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAF-----IEQRNYI 300
Query: 568 HGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPE-FESGSYSCQ 626
H + +++NIL+ L+ +++D GLA + G APE GS++ +
Sbjct: 301 HRDLRAANILVSASLVCKIADFGLARV-----------GAKFPIKWTAPEAINFGSFTIK 349
Query: 627 SDVYSLGVVMLELLT-GRKPY-DRSRPRGEQSLVR-WAIPR 664
SDV+S G++++E++T GR PY S P ++L R + +PR
Sbjct: 350 SDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPR 390
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 110/225 (48%), Gaps = 19/225 (8%)
Query: 430 FTIASLQQYTNSFSEGNFIGEGLLGSVY--KAELPGGKLLAVKKLSNTVSQRQTDEE-FL 486
F S +++ + +G+G G V K ++ G + AVK +S +++TD+E L
Sbjct: 39 FVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQEC-AVKVISKRQVKQKTDKESLL 97
Query: 487 ELASTISRLRHGNIVELIGYCNEHGQHLLVYD-YGGNCTLHDLLHSDEEAHKKFSWNIRI 545
+ +L H NI++L + + G LV + Y G +++ + K+FS
Sbjct: 98 REVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEII-----SRKRFSEVDAA 152
Query: 546 RVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEK---LIVRVSDCGLAPLLFSGSTNE 602
R+ + Y+ + IVH + K N+LL+ K +R+ D GL+ ++ +
Sbjct: 153 RIIRQVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF--EASKK 207
Query: 603 LSEGLLTAHGSGAPEFESGSYSCQSDVYSLGVVMLELLTGRKPYD 647
+ + + TA+ APE G+Y + DV+S GV++ LL+G P++
Sbjct: 208 MKDKIGTAYYI-APEVLHGTYDEKCDVWSTGVILYILLSGCPPFN 251
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 110/225 (48%), Gaps = 19/225 (8%)
Query: 430 FTIASLQQYTNSFSEGNFIGEGLLGSVY--KAELPGGKLLAVKKLSNTVSQRQTDEE-FL 486
F S +++ + +G+G G V K ++ G + AVK +S +++TD+E L
Sbjct: 40 FVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQEC-AVKVISKRQVKQKTDKESLL 98
Query: 487 ELASTISRLRHGNIVELIGYCNEHGQHLLVYD-YGGNCTLHDLLHSDEEAHKKFSWNIRI 545
+ +L H NI++L + + G LV + Y G +++ + K+FS
Sbjct: 99 REVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEII-----SRKRFSEVDAA 153
Query: 546 RVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLI---VRVSDCGLAPLLFSGSTNE 602
R+ + Y+ + IVH + K N+LL+ K +R+ D GL+ ++ +
Sbjct: 154 RIIRQVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF--EASKK 208
Query: 603 LSEGLLTAHGSGAPEFESGSYSCQSDVYSLGVVMLELLTGRKPYD 647
+ + + TA+ APE G+Y + DV+S GV++ LL+G P++
Sbjct: 209 MKDKIGTAYYI-APEVLHGTYDEKCDVWSTGVILYILLSGCPPFN 252
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 101/230 (43%), Gaps = 33/230 (14%)
Query: 431 TIASLQQYTNSFSEGNFIGEGLLGSVYKAE-LPGGKLLAVKKLSNTVSQRQTDEEFLELA 489
T A Q + ++ IG+G V A + GK +AVK + T + ++
Sbjct: 5 TSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREV 64
Query: 490 STISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLL-----HSDEEAHKKFSWNIR 544
+ L H NIV+L LV +Y + D L ++EA KF +
Sbjct: 65 RIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS 124
Query: 545 IRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELS 604
A+QY + IVH + K+ N+LLD + ++++D G +NE +
Sbjct: 125 ---------AVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGF--------SNEFT 164
Query: 605 EG--LLTAHGS---GAPE-FESGSYSC-QSDVYSLGVVMLELLTGRKPYD 647
G L T GS APE F+ Y + DV+SLGV++ L++G P+D
Sbjct: 165 FGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 96/221 (43%), Gaps = 17/221 (7%)
Query: 440 NSFSEGNFIGEGLLGSVYKAELP--GGKLL--AVKKLSNTVSQRQTDEEFLELASTISRL 495
F+ G +G+G GSV +A+L G + AVK L + EEFL A+ +
Sbjct: 23 QQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEF 82
Query: 496 RHGNIVELIGYCNEHGQH------LLVYDYGGNCTLHDLLHSDEEAHKKFSWNIR--IRV 547
H ++ +L+G +++ + + LH L + F+ ++ +R
Sbjct: 83 DHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRF 142
Query: 548 ALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGS-TNELSEG 606
+ A ++YL +H + + N +L E + V V+D GL+ ++SG +
Sbjct: 143 MVDIACGMEYLSS---RNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCAS 199
Query: 607 LLTAHGSGAPEFESGSYSCQSDVYSLGVVMLELLT-GRKPY 646
L Y+ SDV++ GV M E++T G+ PY
Sbjct: 200 KLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPY 240
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 101/230 (43%), Gaps = 33/230 (14%)
Query: 431 TIASLQQYTNSFSEGNFIGEGLLGSVYKAE-LPGGKLLAVKKLSNTVSQRQTDEEFLELA 489
T A Q + ++ IG+G V A + GK +AVK + T + ++
Sbjct: 5 TSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREV 64
Query: 490 STISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLL-----HSDEEAHKKFSWNIR 544
+ L H NIV+L LV +Y + D L ++EA KF +
Sbjct: 65 RIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS 124
Query: 545 IRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELS 604
A+QY + IVH + K+ N+LLD + ++++D G +NE +
Sbjct: 125 ---------AVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGF--------SNEFT 164
Query: 605 EG--LLTAHGS---GAPE-FESGSYSC-QSDVYSLGVVMLELLTGRKPYD 647
G L T GS APE F+ Y + DV+SLGV++ L++G P+D
Sbjct: 165 FGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 97/229 (42%), Gaps = 31/229 (13%)
Query: 437 QYTNSFSEGNFIGEGLLGSVYKAE-LPGGKLLAVKKLSNTVSQRQTDEEFLELASTISR- 494
+Y + F E +G+G G V KA + A+KK+ +T + T + L ++++
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASLNHQ 62
Query: 495 ---------LRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRI 545
L N V+ + + +Y N TL+DL+HS+ ++ +
Sbjct: 63 YVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLF 122
Query: 546 RVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLL---------- 595
R L A L + I+H N K NI +DE V++ D GLA +
Sbjct: 123 RQILEA------LSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLD 176
Query: 596 ---FSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELL 640
GS++ L+ + TA + +G Y+ + D YSLG++ E +
Sbjct: 177 SQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 89/225 (39%), Gaps = 25/225 (11%)
Query: 440 NSFSEGNFIGEGLLGSVYKAELPGGKL---LAVKKLSNTVSQRQTDEEFLELASTISRLR 496
N + IGEG G V KA + L A+K++ S+ + EL
Sbjct: 22 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 81
Query: 497 HGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIR------------ 544
H NI+ L+G C G L +Y + L D L ++ I
Sbjct: 82 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 141
Query: 545 IRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELS 604
+ A AR + YL + +H N + NIL+ E + +++D GL+ G +
Sbjct: 142 LHFAADVARGMDYLS---QKQFIHRNLAARNILVGENYVAKIADFGLS----RGQEVYVK 194
Query: 605 E--GLLTAHGSGAPEFESGSYSCQSDVYSLGVVMLELLT-GRKPY 646
+ G L Y+ SDV+S GV++ E+++ G PY
Sbjct: 195 KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPY 239
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 99/225 (44%), Gaps = 23/225 (10%)
Query: 431 TIASLQQYTNSFSEGNFIGEGLLGSVYKAE-LPGGKLLAVKKLSNTVSQRQTDEEFLELA 489
T A Q + ++ IG+G V A + GK +AVK + T + ++
Sbjct: 5 TSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREV 64
Query: 490 STISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLL-----HSDEEAHKKFSWNIR 544
+ L H NIV+L LV +Y + D L ++EA KF +
Sbjct: 65 RIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS 124
Query: 545 IRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELS 604
A+QY + IVH + K+ N+LLD + ++++D G + G N+L
Sbjct: 125 ---------AVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFG--NKL- 169
Query: 605 EGLLTAHGSGAPE-FESGSYSC-QSDVYSLGVVMLELLTGRKPYD 647
+ A APE F+ Y + DV+SLGV++ L++G P+D
Sbjct: 170 DAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 94/213 (44%), Gaps = 33/213 (15%)
Query: 448 IGEGLLGSVYKAE-LPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGY 506
IG+G V A + GK +AVK + T + ++ + L H NIV+L
Sbjct: 15 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 74
Query: 507 CNEHGQHLLVYDYGGNCTLHDLL-----HSDEEAHKKFSWNIRIRVALGAARALQYLQEV 561
LV +Y + D L ++EA KF A+QY +
Sbjct: 75 IETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFR---------QIVSAVQYCHQK 125
Query: 562 CEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEG--LLTAHGS---GAP 616
IVH + K+ N+LLD + ++++D G +NE + G L T GS AP
Sbjct: 126 F---IVHRDLKAENLLLDADMNIKIADFGF--------SNEFTFGNKLDTFCGSPPYAAP 174
Query: 617 E-FESGSYSC-QSDVYSLGVVMLELLTGRKPYD 647
E F+ Y + DV+SLGV++ L++G P+D
Sbjct: 175 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 207
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 96/213 (45%), Gaps = 17/213 (7%)
Query: 437 QYTNSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRL 495
++ +F + IGEG G VYKA G+++A+KK+ + S + L
Sbjct: 7 EFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 66
Query: 496 RHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARAL 555
H NIV+L+ + + LV+++ LH D + S I + L +
Sbjct: 67 NHPNIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLF 117
Query: 556 QYLQ--EVCEP-PIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHG 612
Q LQ C ++H + K N+L++ + ++++D GLA F + ++T
Sbjct: 118 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYTHEVVTL-W 175
Query: 613 SGAPEFESGS--YSCQSDVYSLGVVMLELLTGR 643
APE G YS D++SLG + E++T R
Sbjct: 176 YRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 102/215 (47%), Gaps = 15/215 (6%)
Query: 440 NSFSEGNFIGEGLLGSVYKA-ELPGGKLL----AVKKLSNTVSQRQTDEEFLELASTISR 494
F + +G G G+VYK +P G+ + A+K+L S + ++E L+ A ++
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK-ANKEILDEAYVMAS 74
Query: 495 LRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARA 554
+ + ++ L+G C L++ L + + ++ N +++A G
Sbjct: 75 VDNPHVCRLLGICLTSTVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKG---- 130
Query: 555 LQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG 614
+ YL++ +VH + + N+L+ V+++D GLA LL + +EG
Sbjct: 131 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 187
Query: 615 APE-FESGSYSCQSDVYSLGVVMLELLT-GRKPYD 647
A E Y+ QSDV+S GV + EL+T G KPYD
Sbjct: 188 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 222
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 74/164 (45%), Gaps = 4/164 (2%)
Query: 73 VTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNLPV--TVRNFSLSGNQLT 130
+ E+ L G + TL + ++++ LS N++ G+IPS+L +R+ L N L
Sbjct: 393 LQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLE 452
Query: 131 GSIPEXXXXXXXXXXXXXXXXXXXGGIPDAFHQFTGLINFDLSANNLTGQLPPSTRNLSS 190
G IP+ G IP T L LS N LTG++P L +
Sbjct: 453 GEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLEN 512
Query: 191 LYSLHLQNNKLSGTLNV-LEDLH-LIDLNIENNLFSGPIPEKLL 232
L L L NN SG + L D LI L++ NLF+G IP +
Sbjct: 513 LAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMF 556
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 101/261 (38%), Gaps = 44/261 (16%)
Query: 102 LSNNHIGGSIPSNLP--VTVRNFSLSGNQLTGSIPEXXXXXXXXXXXXXXXXXXXGGIPD 159
L NN G IP L + + LS N L+G+IP G IP
Sbjct: 398 LQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQ 457
Query: 160 AFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLSGTL----NVLEDLHLID 215
L L N+LTG++P N ++L + L NN+L+G + LE+L ++
Sbjct: 458 ELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILK 517
Query: 216 LNIENNLFSGPIPEKL---LSIPNFRKDGNPFNTTVXXXXXXXXXXXXXXXXTFQAPGDQ 272
L NN FSG IP +L S+ + N FN T+
Sbjct: 518 L--SNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTI------------------------ 551
Query: 273 ADAPSAFEMTNSAKAKKFWTTKRVIWVALSAAAILCALGCSLFMWRYCKTRRVNRDAEKN 332
P+A + A F KR +++ C +L ++ ++ ++NR + +N
Sbjct: 552 ---PAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRN 608
Query: 333 -----TGTYKGHGEKPNYKNS 348
+ Y GH P + N+
Sbjct: 609 PCNITSRVYGGH-TSPTFDNN 628
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 69/157 (43%), Gaps = 29/157 (18%)
Query: 84 GGVLADTLGDLESVINIDLSNNHIGGSIP---SNLPVTVRNFSLSGNQLTGSIPEXXXXX 140
G + DTL + + +DLS N G +P +NL ++ LS N +G I
Sbjct: 329 GELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPI------- 381
Query: 141 XXXXXXXXXXXXXXGGIPDAFHQ-FTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNN 199
+P+ L L N TG++PP+ N S L SLHL N
Sbjct: 382 ----------------LPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFN 425
Query: 200 KLSGTL-NVLEDL-HLIDLNIENNLFSGPIPEKLLSI 234
LSGT+ + L L L DL + N+ G IP++L+ +
Sbjct: 426 YLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYV 462
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 37/82 (45%)
Query: 124 LSGNQLTGSIPEXXXXXXXXXXXXXXXXXXXGGIPDAFHQFTGLINFDLSANNLTGQLPP 183
+S N L+G IP+ G IPD GL DLS+N L G++P
Sbjct: 636 MSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQ 695
Query: 184 STRNLSSLYSLHLQNNKLSGTL 205
+ L+ L + L NN LSG +
Sbjct: 696 AMSALTMLTEIDLSNNNLSGPI 717
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 45/101 (44%), Gaps = 2/101 (1%)
Query: 84 GGVLADTLGDLESVINIDLSNNHIGGSIPSNLPVTVRNF--SLSGNQLTGSIPEXXXXXX 141
GG + T + S++ +D+S N + G IP + F +L N ++GSIP+
Sbjct: 618 GGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLR 677
Query: 142 XXXXXXXXXXXXXGGIPDAFHQFTGLINFDLSANNLTGQLP 182
G IP A T L DLS NNL+G +P
Sbjct: 678 GLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIP 718
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 76/201 (37%), Gaps = 65/201 (32%)
Query: 91 LGDLESVINIDLSNNHIGG---------------SIPSN--------LPV---------- 117
LGD ++ ++D+S N + G +I SN LP+
Sbjct: 216 LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAE 275
Query: 118 ----------------TVRNFSLSGNQLTGSIPEXXXXXXXXXXXXXXXXXXXGGIP-DA 160
T+ LSGN G++P G +P D
Sbjct: 276 NKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDT 335
Query: 161 FHQFTGLINFDLSANNLTGQLPPSTRNLS-SLYSLHLQNNKLSGTL---------NVLED 210
+ GL DLS N +G+LP S NLS SL +L L +N SG + N L++
Sbjct: 336 LLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQE 395
Query: 211 LHLIDLNIENNLFSGPIPEKL 231
L+L +NN F+G IP L
Sbjct: 396 LYL-----QNNGFTGKIPPTL 411
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 82/209 (39%), Gaps = 52/209 (24%)
Query: 72 NVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNL---------------- 115
N+ ++L+ + G + LGD S+I +DL+ N G+IP+ +
Sbjct: 512 NLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKR 571
Query: 116 PVTVRNFSL------SGN--QLTGSIPEXXXXXXXXXXXXXXXXXXXGGIPDAFHQFTGL 167
V ++N + +GN + G E G F +
Sbjct: 572 YVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSM 631
Query: 168 INFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLSGT----------LNVLEDLH----- 212
+ D+S N L+G +P ++ L+ L+L +N +SG+ LN+L DL
Sbjct: 632 MFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNIL-DLSSNKLD 690
Query: 213 ------------LIDLNIENNLFSGPIPE 229
L ++++ NN SGPIPE
Sbjct: 691 GRIPQAMSALTMLTEIDLSNNNLSGPIPE 719
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 65/155 (41%), Gaps = 29/155 (18%)
Query: 78 LTGMNL-GGVLADTLGDLESVINIDLSNNHIGGSIPSNLPVTVRNFSLSGNQLTGSIPEX 136
++G N+ G VL+D G+L+ ++ +S N I G + + V + +S N + IP
Sbjct: 160 ISGANVVGWVLSDGCGELK---HLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIP-- 214
Query: 137 XXXXXXXXXXXXXXXXXXGGIPDAFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHL 196
+ L + D+S N L+G + + L L++
Sbjct: 215 -----------------------FLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNI 251
Query: 197 QNNKLSGTLNVLEDLHLIDLNIENNLFSGPIPEKL 231
+N+ G + L L L++ N F+G IP+ L
Sbjct: 252 SSNQFVGPIPPLPLKSLQYLSLAENKFTGEIPDFL 286
Score = 30.0 bits (66), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 83/191 (43%), Gaps = 13/191 (6%)
Query: 48 LEKWLSFGGDPCGDSWQGVFCVFSNVTEIRLTG--MNLG-GVLADTLGDLESVINIDLSN 104
L W S +PC ++ GV C VT I L+ +N+G ++ +L L + ++ LSN
Sbjct: 27 LPDW-SSNKNPC--TFDGVTCRDDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESLFLSN 83
Query: 105 NHIGGSIPS-NLPVTVRNFSLSGNQLTGSIPEXXXXXXXXXXXXXXXXXXXGGIPDAFH- 162
+HI GS+ ++ + LS N L+G + P
Sbjct: 84 SHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSG 143
Query: 163 --QFTGLINFDLSANNLTGQLPPS---TRNLSSLYSLHLQNNKLSGTLNVLEDLHLIDLN 217
+ L DLSAN+++G + L L + NK+SG ++V ++L L+
Sbjct: 144 GLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLD 203
Query: 218 IENNLFSGPIP 228
+ +N FS IP
Sbjct: 204 VSSNNFSTGIP 214
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 74/164 (45%), Gaps = 4/164 (2%)
Query: 73 VTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNLPV--TVRNFSLSGNQLT 130
+ E+ L G + TL + ++++ LS N++ G+IPS+L +R+ L N L
Sbjct: 396 LQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLE 455
Query: 131 GSIPEXXXXXXXXXXXXXXXXXXXGGIPDAFHQFTGLINFDLSANNLTGQLPPSTRNLSS 190
G IP+ G IP T L LS N LTG++P L +
Sbjct: 456 GEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLEN 515
Query: 191 LYSLHLQNNKLSGTLNV-LEDLH-LIDLNIENNLFSGPIPEKLL 232
L L L NN SG + L D LI L++ NLF+G IP +
Sbjct: 516 LAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMF 559
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 101/261 (38%), Gaps = 44/261 (16%)
Query: 102 LSNNHIGGSIPSNLP--VTVRNFSLSGNQLTGSIPEXXXXXXXXXXXXXXXXXXXGGIPD 159
L NN G IP L + + LS N L+G+IP G IP
Sbjct: 401 LQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQ 460
Query: 160 AFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLSGTL----NVLEDLHLID 215
L L N+LTG++P N ++L + L NN+L+G + LE+L ++
Sbjct: 461 ELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILK 520
Query: 216 LNIENNLFSGPIPEKL---LSIPNFRKDGNPFNTTVXXXXXXXXXXXXXXXXTFQAPGDQ 272
L NN FSG IP +L S+ + N FN T+
Sbjct: 521 L--SNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTI------------------------ 554
Query: 273 ADAPSAFEMTNSAKAKKFWTTKRVIWVALSAAAILCALGCSLFMWRYCKTRRVNRDAEKN 332
P+A + A F KR +++ C +L ++ ++ ++NR + +N
Sbjct: 555 ---PAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRN 611
Query: 333 -----TGTYKGHGEKPNYKNS 348
+ Y GH P + N+
Sbjct: 612 PCNITSRVYGGH-TSPTFDNN 631
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 69/157 (43%), Gaps = 29/157 (18%)
Query: 84 GGVLADTLGDLESVINIDLSNNHIGGSIP---SNLPVTVRNFSLSGNQLTGSIPEXXXXX 140
G + DTL + + +DLS N G +P +NL ++ LS N +G I
Sbjct: 332 GELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPI------- 384
Query: 141 XXXXXXXXXXXXXXGGIPDAFHQ-FTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNN 199
+P+ L L N TG++PP+ N S L SLHL N
Sbjct: 385 ----------------LPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFN 428
Query: 200 KLSGTL-NVLEDL-HLIDLNIENNLFSGPIPEKLLSI 234
LSGT+ + L L L DL + N+ G IP++L+ +
Sbjct: 429 YLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYV 465
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 37/82 (45%)
Query: 124 LSGNQLTGSIPEXXXXXXXXXXXXXXXXXXXGGIPDAFHQFTGLINFDLSANNLTGQLPP 183
+S N L+G IP+ G IPD GL DLS+N L G++P
Sbjct: 639 MSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQ 698
Query: 184 STRNLSSLYSLHLQNNKLSGTL 205
+ L+ L + L NN LSG +
Sbjct: 699 AMSALTMLTEIDLSNNNLSGPI 720
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 45/101 (44%), Gaps = 2/101 (1%)
Query: 84 GGVLADTLGDLESVINIDLSNNHIGGSIPSNLPVTVRNF--SLSGNQLTGSIPEXXXXXX 141
GG + T + S++ +D+S N + G IP + F +L N ++GSIP+
Sbjct: 621 GGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLR 680
Query: 142 XXXXXXXXXXXXXGGIPDAFHQFTGLINFDLSANNLTGQLP 182
G IP A T L DLS NNL+G +P
Sbjct: 681 GLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIP 721
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 76/201 (37%), Gaps = 65/201 (32%)
Query: 91 LGDLESVINIDLSNNHIGG---------------SIPSN--------LPV---------- 117
LGD ++ ++D+S N + G +I SN LP+
Sbjct: 219 LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAE 278
Query: 118 ----------------TVRNFSLSGNQLTGSIPEXXXXXXXXXXXXXXXXXXXGGIP-DA 160
T+ LSGN G++P G +P D
Sbjct: 279 NKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDT 338
Query: 161 FHQFTGLINFDLSANNLTGQLPPSTRNLS-SLYSLHLQNNKLSGTL---------NVLED 210
+ GL DLS N +G+LP S NLS SL +L L +N SG + N L++
Sbjct: 339 LLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQE 398
Query: 211 LHLIDLNIENNLFSGPIPEKL 231
L+L +NN F+G IP L
Sbjct: 399 LYL-----QNNGFTGKIPPTL 414
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 82/209 (39%), Gaps = 52/209 (24%)
Query: 72 NVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNL---------------- 115
N+ ++L+ + G + LGD S+I +DL+ N G+IP+ +
Sbjct: 515 NLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKR 574
Query: 116 PVTVRNFSL------SGN--QLTGSIPEXXXXXXXXXXXXXXXXXXXGGIPDAFHQFTGL 167
V ++N + +GN + G E G F +
Sbjct: 575 YVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSM 634
Query: 168 INFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLSGT----------LNVLEDLH----- 212
+ D+S N L+G +P ++ L+ L+L +N +SG+ LN+L DL
Sbjct: 635 MFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNIL-DLSSNKLD 693
Query: 213 ------------LIDLNIENNLFSGPIPE 229
L ++++ NN SGPIPE
Sbjct: 694 GRIPQAMSALTMLTEIDLSNNNLSGPIPE 722
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 65/155 (41%), Gaps = 29/155 (18%)
Query: 78 LTGMNL-GGVLADTLGDLESVINIDLSNNHIGGSIPSNLPVTVRNFSLSGNQLTGSIPEX 136
++G N+ G VL+D G+L+ ++ +S N I G + + V + +S N + IP
Sbjct: 163 ISGANVVGWVLSDGCGELK---HLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIP-- 217
Query: 137 XXXXXXXXXXXXXXXXXXGGIPDAFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHL 196
+ L + D+S N L+G + + L L++
Sbjct: 218 -----------------------FLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNI 254
Query: 197 QNNKLSGTLNVLEDLHLIDLNIENNLFSGPIPEKL 231
+N+ G + L L L++ N F+G IP+ L
Sbjct: 255 SSNQFVGPIPPLPLKSLQYLSLAENKFTGEIPDFL 289
Score = 29.6 bits (65), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 83/191 (43%), Gaps = 13/191 (6%)
Query: 48 LEKWLSFGGDPCGDSWQGVFCVFSNVTEIRLTG--MNLG-GVLADTLGDLESVINIDLSN 104
L W S +PC ++ GV C VT I L+ +N+G ++ +L L + ++ LSN
Sbjct: 30 LPDW-SSNKNPC--TFDGVTCRDDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESLFLSN 86
Query: 105 NHIGGSIPS-NLPVTVRNFSLSGNQLTGSIPEXXXXXXXXXXXXXXXXXXXGGIPDAFH- 162
+HI GS+ ++ + LS N L+G + P
Sbjct: 87 SHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSG 146
Query: 163 --QFTGLINFDLSANNLTGQLPPS---TRNLSSLYSLHLQNNKLSGTLNVLEDLHLIDLN 217
+ L DLSAN+++G + L L + NK+SG ++V ++L L+
Sbjct: 147 GLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLD 206
Query: 218 IENNLFSGPIP 228
+ +N FS IP
Sbjct: 207 VSSNNFSTGIP 217
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 96/213 (45%), Gaps = 17/213 (7%)
Query: 437 QYTNSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRL 495
++ +F + IGEG G VYKA G+++A+KK+ + S + L
Sbjct: 7 EFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 66
Query: 496 RHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARAL 555
H NIV+L+ + + LV+++ LH D + S I + L +
Sbjct: 67 NHPNIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLF 117
Query: 556 QYLQ--EVCEP-PIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHG 612
Q LQ C ++H + K N+L++ + ++++D GLA F + ++T
Sbjct: 118 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYTHEVVTL-W 175
Query: 613 SGAPEFESGS--YSCQSDVYSLGVVMLELLTGR 643
APE G YS D++SLG + E++T R
Sbjct: 176 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 15/209 (7%)
Query: 445 GNFIGEGLLGSVYKAEL--PGGKLLAVK-KLSNTVSQRQTDEEFLELASTISRLRHGNIV 501
G IGEG G V++ P LAV K + E+FL+ A T+ + H +IV
Sbjct: 43 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 102
Query: 502 ELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIR--IRVALGAARALQYLQ 559
+LIG E+ +++ CTL +L + +K+S ++ I A + AL YL+
Sbjct: 103 KLIGVITENPVWIIM----ELCTLGELRSFLQV--RKYSLDLASLILYAYQLSTALAYLE 156
Query: 560 EVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE 619
VH + + N+L+ V++ D GL+ + + + S+G L
Sbjct: 157 S---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESIN 213
Query: 620 SGSYSCQSDVYSLGVVMLELLT-GRKPYD 647
++ SDV+ GV M E+L G KP+
Sbjct: 214 FRRFTSASDVWMFGVCMWEILMHGVKPFQ 242
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 96/210 (45%), Gaps = 19/210 (9%)
Query: 445 GNFIGEGLLGSVYKA-----ELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGN 499
G IGEG G V++ E P + A+K N S E+FL+ A T+ + H +
Sbjct: 395 GRCIGEGQFGDVHQGIYMSPENPAMAV-AIKTCKNCTSD-SVREKFLQEALTMRQFDHPH 452
Query: 500 IVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIR--IRVALGAARALQY 557
IV+LIG E+ V+ CTL +L + +KFS ++ I A + AL Y
Sbjct: 453 IVKLIGVITENP----VWIIMELCTLGELRSFLQV--RKFSLDLASLILYAYQLSTALAY 506
Query: 558 LQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPE 617
L+ VH + + N+L+ V++ D GL+ + + + S+G L
Sbjct: 507 LES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES 563
Query: 618 FESGSYSCQSDVYSLGVVMLELLT-GRKPY 646
++ SDV+ GV M E+L G KP+
Sbjct: 564 INFRRFTSASDVWMFGVCMWEILMHGVKPF 593
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 96/210 (45%), Gaps = 19/210 (9%)
Query: 445 GNFIGEGLLGSVYKA-----ELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGN 499
G IGEG G V++ E P + A+K N S E+FL+ A T+ + H +
Sbjct: 15 GRCIGEGQFGDVHQGIYMSPENPAMAV-AIKTCKNCTSD-SVREKFLQEALTMRQFDHPH 72
Query: 500 IVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIR--IRVALGAARALQY 557
IV+LIG E+ V+ CTL +L + +K+S ++ I A + AL Y
Sbjct: 73 IVKLIGVITENP----VWIIMELCTLGELRSFLQV--RKYSLDLASLILYAYQLSTALAY 126
Query: 558 LQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPE 617
L+ VH + + N+L+ V++ D GL+ + + + S+G L
Sbjct: 127 LES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES 183
Query: 618 FESGSYSCQSDVYSLGVVMLELLT-GRKPY 646
++ SDV+ GV M E+L G KP+
Sbjct: 184 INFRRFTSASDVWMFGVCMWEILMHGVKPF 213
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 94/208 (45%), Gaps = 15/208 (7%)
Query: 445 GNFIGEGLLGSVYKAEL--PGGKLLAVK-KLSNTVSQRQTDEEFLELASTISRLRHGNIV 501
G IGEG G V++ P LAV K + E+FL+ A T+ + H +IV
Sbjct: 15 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 74
Query: 502 ELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIR--IRVALGAARALQYLQ 559
+LIG E+ V+ CTL +L + +K+S ++ I A + AL YL+
Sbjct: 75 KLIGVITENP----VWIIMELCTLGELRSFLQV--RKYSLDLASLILYAYQLSTALAYLE 128
Query: 560 EVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE 619
VH + + N+L+ V++ D GL+ + + + S+G L
Sbjct: 129 S---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESIN 185
Query: 620 SGSYSCQSDVYSLGVVMLELLT-GRKPY 646
++ SDV+ GV M E+L G KP+
Sbjct: 186 FRRFTSASDVWMFGVCMWEILMHGVKPF 213
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 101/215 (46%), Gaps = 15/215 (6%)
Query: 440 NSFSEGNFIGEGLLGSVYKA-ELPGGKLL----AVKKLSNTVSQRQTDEEFLELASTISR 494
F + +G G G+VYK +P G+ + A+K+L S + ++E L+ A ++
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK-ANKEILDEAYVMAS 73
Query: 495 LRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARA 554
+ + ++ L+G C L+ L + + ++ N +++A G
Sbjct: 74 VDNPHVCRLLGICLTSTVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKG---- 129
Query: 555 LQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG 614
+ YL++ +VH + + N+L+ V+++D GLA LL + +EG
Sbjct: 130 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 615 APE-FESGSYSCQSDVYSLGVVMLELLT-GRKPYD 647
A E Y+ QSDV+S GV + EL+T G KPYD
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 95/208 (45%), Gaps = 15/208 (7%)
Query: 445 GNFIGEGLLGSVYKAEL--PGGKLLAVK-KLSNTVSQRQTDEEFLELASTISRLRHGNIV 501
G IGEG G V++ P LAV K + E+FL+ A T+ + H +IV
Sbjct: 17 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 76
Query: 502 ELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIR--IRVALGAARALQYLQ 559
+LIG E+ +++ CTL +L + +K+S ++ I A + AL YL+
Sbjct: 77 KLIGVITENPVWIIM----ELCTLGELRSFLQV--RKYSLDLASLILYAYQLSTALAYLE 130
Query: 560 EVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE 619
VH + + N+L+ V++ D GL+ + + + S+G L
Sbjct: 131 S---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESIN 187
Query: 620 SGSYSCQSDVYSLGVVMLELLT-GRKPY 646
++ SDV+ GV M E+L G KP+
Sbjct: 188 FRRFTSASDVWMFGVCMWEILMHGVKPF 215
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 95/208 (45%), Gaps = 15/208 (7%)
Query: 445 GNFIGEGLLGSVYKAEL--PGGKLLAVK-KLSNTVSQRQTDEEFLELASTISRLRHGNIV 501
G IGEG G V++ P LAV K + E+FL+ A T+ + H +IV
Sbjct: 20 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 79
Query: 502 ELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIR--IRVALGAARALQYLQ 559
+LIG E+ +++ CTL +L + +K+S ++ I A + AL YL+
Sbjct: 80 KLIGVITENPVWIIM----ELCTLGELRSFLQV--RKYSLDLASLILYAYQLSTALAYLE 133
Query: 560 EVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE 619
VH + + N+L+ V++ D GL+ + + + S+G L
Sbjct: 134 S---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESIN 190
Query: 620 SGSYSCQSDVYSLGVVMLELLT-GRKPY 646
++ SDV+ GV M E+L G KP+
Sbjct: 191 FRRFTSASDVWMFGVCMWEILMHGVKPF 218
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 101/230 (43%), Gaps = 33/230 (14%)
Query: 431 TIASLQQYTNSFSEGNFIGEGLLGSVYKAE-LPGGKLLAVKKLSNTVSQRQTDEEFLELA 489
T A Q + ++ IG+G V A + GK +AV+ + T + ++
Sbjct: 5 TSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREV 64
Query: 490 STISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLL-----HSDEEAHKKFSWNIR 544
+ L H NIV+L LV +Y + D L ++EA KF +
Sbjct: 65 RIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS 124
Query: 545 IRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELS 604
A+QY + IVH + K+ N+LLD + ++++D G +NE +
Sbjct: 125 ---------AVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGF--------SNEFT 164
Query: 605 EG--LLTAHGS---GAPE-FESGSYSC-QSDVYSLGVVMLELLTGRKPYD 647
G L T GS APE F+ Y + DV+SLGV++ L++G P+D
Sbjct: 165 FGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 96/210 (45%), Gaps = 19/210 (9%)
Query: 445 GNFIGEGLLGSVYKA-----ELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGN 499
G IGEG G V++ E P + A+K N S E+FL+ A T+ + H +
Sbjct: 395 GRCIGEGQFGDVHQGIYMSPENPAMAV-AIKTCKNCTSD-SVREKFLQEALTMRQFDHPH 452
Query: 500 IVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIR--IRVALGAARALQY 557
IV+LIG E+ V+ CTL +L + +KFS ++ I A + AL Y
Sbjct: 453 IVKLIGVITENP----VWIIMELCTLGELRSFLQV--RKFSLDLASLILYAYQLSTALAY 506
Query: 558 LQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPE 617
L+ VH + + N+L+ V++ D GL+ + + + S+G L
Sbjct: 507 LES---KRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES 563
Query: 618 FESGSYSCQSDVYSLGVVMLELLT-GRKPY 646
++ SDV+ GV M E+L G KP+
Sbjct: 564 INFRRFTSASDVWMFGVCMWEILMHGVKPF 593
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 95/208 (45%), Gaps = 15/208 (7%)
Query: 445 GNFIGEGLLGSVYKAEL--PGGKLLAVK-KLSNTVSQRQTDEEFLELASTISRLRHGNIV 501
G IGEG G V++ P LAV K + E+FL+ A T+ + H +IV
Sbjct: 12 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 71
Query: 502 ELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIR--IRVALGAARALQYLQ 559
+LIG E+ +++ CTL +L + +K+S ++ I A + AL YL+
Sbjct: 72 KLIGVITENPVWIIM----ELCTLGELRSFLQV--RKYSLDLASLILYAYQLSTALAYLE 125
Query: 560 EVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE 619
VH + + N+L+ V++ D GL+ + + + S+G L
Sbjct: 126 S---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESIN 182
Query: 620 SGSYSCQSDVYSLGVVMLELLT-GRKPY 646
++ SDV+ GV M E+L G KP+
Sbjct: 183 FRRFTSASDVWMFGVCMWEILMHGVKPF 210
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 121/261 (46%), Gaps = 29/261 (11%)
Query: 436 QQYTNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISR 494
+ Y ++F + IGEG G V A + GKL+AVKK+ QR+ E L I R
Sbjct: 28 RSYLDNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR---ELLFNEVVIMR 81
Query: 495 -LRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAAR 553
+H N+VE+ + +V ++ L D++ H + + V L +
Sbjct: 82 DYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV-----THTRMNEEQIAAVCLAVLQ 136
Query: 554 ALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNEL--SEGLLTAH 611
AL L ++H + KS +ILL V++SD G + + E+ + L+
Sbjct: 137 ALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFC----AQVSKEVPRRKXLVGTP 189
Query: 612 GSGAPEFESG-SYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAI-PRLHDID 669
APE S Y + D++SLG++++E++ G PY P ++R + PRL ++
Sbjct: 190 YWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLH 249
Query: 670 ALSRMVDPSLDGAYLAKSLSR 690
+S PSL G +L + L R
Sbjct: 250 KVS----PSLKG-FLDRLLVR 265
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 95/208 (45%), Gaps = 15/208 (7%)
Query: 445 GNFIGEGLLGSVYKAEL--PGGKLLAVK-KLSNTVSQRQTDEEFLELASTISRLRHGNIV 501
G IGEG G V++ P LAV K + E+FL+ A T+ + H +IV
Sbjct: 18 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 77
Query: 502 ELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIR--IRVALGAARALQYLQ 559
+LIG E+ +++ CTL +L + +K+S ++ I A + AL YL+
Sbjct: 78 KLIGVITENPVWIIM----ELCTLGELRSFLQV--RKYSLDLASLILYAYQLSTALAYLE 131
Query: 560 EVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE 619
VH + + N+L+ V++ D GL+ + + + S+G L
Sbjct: 132 S---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESIN 188
Query: 620 SGSYSCQSDVYSLGVVMLELLT-GRKPY 646
++ SDV+ GV M E+L G KP+
Sbjct: 189 FRRFTSASDVWMFGVCMWEILMHGVKPF 216
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 121/261 (46%), Gaps = 29/261 (11%)
Query: 436 QQYTNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISR 494
+ Y ++F + IGEG G V A + GKL+AVKK+ QR+ E L I R
Sbjct: 30 RSYLDNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR---ELLFNEVVIMR 83
Query: 495 -LRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAAR 553
+H N+VE+ + +V ++ L D++ H + + V L +
Sbjct: 84 DYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV-----THTRMNEEQIAAVCLAVLQ 138
Query: 554 ALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNEL--SEGLLTAH 611
AL L ++H + KS +ILL V++SD G + + E+ + L+
Sbjct: 139 ALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFC----AQVSKEVPRRKXLVGTP 191
Query: 612 GSGAPEFESG-SYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAI-PRLHDID 669
APE S Y + D++SLG++++E++ G PY P ++R + PRL ++
Sbjct: 192 YWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLH 251
Query: 670 ALSRMVDPSLDGAYLAKSLSR 690
+S PSL G +L + L R
Sbjct: 252 KVS----PSLKG-FLDRLLVR 267
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 121/261 (46%), Gaps = 29/261 (11%)
Query: 436 QQYTNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISR 494
+ Y ++F + IGEG G V A + GKL+AVKK+ QR+ E L I R
Sbjct: 19 RSYLDNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR---ELLFNEVVIMR 72
Query: 495 -LRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAAR 553
+H N+VE+ + +V ++ L D++ H + + V L +
Sbjct: 73 DYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV-----THTRMNEEQIAAVCLAVLQ 127
Query: 554 ALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNEL--SEGLLTAH 611
AL L ++H + KS +ILL V++SD G + + E+ + L+
Sbjct: 128 ALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFC----AQVSKEVPRRKXLVGTP 180
Query: 612 GSGAPEFESG-SYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAI-PRLHDID 669
APE S Y + D++SLG++++E++ G PY P ++R + PRL ++
Sbjct: 181 YWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLH 240
Query: 670 ALSRMVDPSLDGAYLAKSLSR 690
+S PSL G +L + L R
Sbjct: 241 KVS----PSLKG-FLDRLLVR 256
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 119/260 (45%), Gaps = 27/260 (10%)
Query: 436 QQYTNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISR 494
+ Y ++F + IGEG G V A + GKL+AVKK+ QR+ E +
Sbjct: 23 RSYLDNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR--ELLFNEVVIMRD 77
Query: 495 LRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARA 554
+H N+VE+ + +V ++ L D++ H + + V L +A
Sbjct: 78 YQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV-----THTRMNEEQIAAVCLAVLQA 132
Query: 555 LQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNEL--SEGLLTAHG 612
L L ++H + KS +ILL V++SD G + + E+ + L+
Sbjct: 133 LSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFC----AQVSKEVPRRKXLVGTPY 185
Query: 613 SGAPEFESG-SYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAI-PRLHDIDA 670
APE S Y + D++SLG++++E++ G PY P ++R + PRL ++
Sbjct: 186 WMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHK 245
Query: 671 LSRMVDPSLDGAYLAKSLSR 690
+S PSL G +L + L R
Sbjct: 246 VS----PSLKG-FLDRLLVR 260
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 99/225 (44%), Gaps = 23/225 (10%)
Query: 431 TIASLQQYTNSFSEGNFIGEGLLGSVYKAE-LPGGKLLAVKKLSNTVSQRQTDEEFLELA 489
T A Q + ++ IG+G V A + GK +AV+ + T + ++
Sbjct: 5 TSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREV 64
Query: 490 STISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLL-----HSDEEAHKKFSWNIR 544
+ L H NIV+L LV +Y + D L ++EA KF +
Sbjct: 65 RIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS 124
Query: 545 IRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELS 604
A+QY + IVH + K+ N+LLD + ++++D G + G N+L
Sbjct: 125 ---------AVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFG--NKLD 170
Query: 605 EGLLTAHGSGAPE-FESGSYSC-QSDVYSLGVVMLELLTGRKPYD 647
E + APE F+ Y + DV+SLGV++ L++G P+D
Sbjct: 171 E-FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 96/207 (46%), Gaps = 28/207 (13%)
Query: 451 GLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEH 510
G G V+KA+L + +AVK + +Q+ + E+ S + ++H NI++ IG +
Sbjct: 35 GRFGCVWKAQLLN-EYVAVKIFP--IQDKQSWQNEYEVYS-LPGMKHENILQFIG-AEKR 89
Query: 511 GQHL-----LVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVC--- 562
G + L+ + +L D L ++ SWN +A AR L YL E
Sbjct: 90 GTSVDVDLWLITAFHEKGSLSDFLKAN-----VVSWNELCHIAETMARGLAYLHEDIPGL 144
Query: 563 ----EPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEF 618
+P I H + KS N+LL L ++D GLA +G + + G + APE
Sbjct: 145 KDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEV 204
Query: 619 ESGSYSCQS------DVYSLGVVMLEL 639
G+ + Q D+Y++G+V+ EL
Sbjct: 205 LEGAINFQRDAFLRIDMYAMGLVLWEL 231
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 91/213 (42%), Gaps = 37/213 (17%)
Query: 448 IGEGLLGSVYKAELP-----GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVE 502
+G+G GSV G+++AVKKL ++ + D F + L+H NIV+
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD--FEREIEILKSLQHDNIVK 76
Query: 503 LIGYCNEHGQH--LLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQE 560
G C G+ L+ +Y +L D L +E + + LQY +
Sbjct: 77 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-------------IDHIKLLQYTSQ 123
Query: 561 VCE-------PPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGS----TNELSEGLLT 609
+C+ +H N + NIL++ + V++ D GL +L E E +
Sbjct: 124 ICKGMEYLGTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIF 183
Query: 610 AHGSGAPE-FESGSYSCQSDVYSLGVVMLELLT 641
+ APE +S SDV+S GVV+ EL T
Sbjct: 184 WY---APESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 121/261 (46%), Gaps = 29/261 (11%)
Query: 436 QQYTNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISR 494
+ Y ++F + IGEG G V A + GKL+AVKK+ QR+ E L I R
Sbjct: 73 RSYLDNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR---ELLFNEVVIMR 126
Query: 495 -LRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAAR 553
+H N+VE+ + +V ++ L D++ H + + V L +
Sbjct: 127 DYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV-----THTRMNEEQIAAVCLAVLQ 181
Query: 554 ALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNEL--SEGLLTAH 611
AL L ++H + KS +ILL V++SD G + + E+ + L+
Sbjct: 182 ALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFC----AQVSKEVPRRKXLVGTP 234
Query: 612 GSGAPEFESG-SYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAI-PRLHDID 669
APE S Y + D++SLG++++E++ G PY P ++R + PRL ++
Sbjct: 235 YWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLH 294
Query: 670 ALSRMVDPSLDGAYLAKSLSR 690
+S PSL G +L + L R
Sbjct: 295 KVS----PSLKG-FLDRLLVR 310
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 121/261 (46%), Gaps = 29/261 (11%)
Query: 436 QQYTNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISR 494
+ Y ++F + IGEG G V A + GKL+AVKK+ QR+ E L I R
Sbjct: 150 RSYLDNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR---ELLFNEVVIMR 203
Query: 495 -LRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAAR 553
+H N+VE+ + +V ++ L D++ H + + V L +
Sbjct: 204 DYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV-----THTRMNEEQIAAVCLAVLQ 258
Query: 554 ALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNEL--SEGLLTAH 611
AL L ++H + KS +ILL V++SD G + + E+ + L+
Sbjct: 259 ALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFC----AQVSKEVPRRKXLVGTP 311
Query: 612 GSGAPEFESG-SYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAI-PRLHDID 669
APE S Y + D++SLG++++E++ G PY P ++R + PRL ++
Sbjct: 312 YWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLH 371
Query: 670 ALSRMVDPSLDGAYLAKSLSR 690
+S PSL G +L + L R
Sbjct: 372 KVS----PSLKG-FLDRLLVR 387
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 115/294 (39%), Gaps = 46/294 (15%)
Query: 445 GNFIGEGLLGSVYKAELPG------GKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHG 498
G +G G G V +A+ G + +AVK L + + EL I H
Sbjct: 32 GKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 91
Query: 499 NIVELIGYCNEHGQHLLV---YDYGGNCTLHDLLHSDE-----EAHKKF-SWNIRIRVAL 549
N+V L+G C + G L+V + GN + + +E + +K F + I +
Sbjct: 92 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSF 151
Query: 550 GAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLT 609
A+ +++L +H + + NILL EK +V++ D GLA ++
Sbjct: 152 QVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARL 208
Query: 610 AHGSGAPE-FESGSYSCQSDVYSLGVVMLELLT-GRKPY-----DRSRPRGEQSLVRWAI 662
APE Y+ QSDV+S GV++ E+ + G PY D R + R
Sbjct: 209 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFXRRLKEGTRMRA 268
Query: 663 PRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDL 716
P + M+D C EP RP SE+V+ L
Sbjct: 269 PDYTTPEMYQTMLD---------------------CWHGEPSQRPTFSELVEHL 301
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 91/194 (46%), Gaps = 25/194 (12%)
Query: 467 LAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLH 526
+A+K L + T EE + A + +L + IV LIG C +LV + G LH
Sbjct: 366 VAIKVLKQGTEKADT-EEMMREAQIMHQLDNPYIVRLIGVCQAEAL-MLVMEMAGGGPLH 423
Query: 527 D-LLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVR 585
L+ EE + +V++G ++YL+E VH N + N+LL + +
Sbjct: 424 KFLVGKREEIPVSNVAELLHQVSMG----MKYLEE---KNFVHRNLAARNVLLVNRHYAK 476
Query: 586 VSDCGLAPLLFSGSTNELSEGLLTAHGSG-------APE-FESGSYSCQSDVYSLGVVML 637
+SD GL+ L + + TA +G APE +S +SDV+S GV M
Sbjct: 477 ISDFGLSKALGA------DDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMW 530
Query: 638 ELLT-GRKPYDRSR 650
E L+ G+KPY + +
Sbjct: 531 EALSYGQKPYKKMK 544
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 89/225 (39%), Gaps = 25/225 (11%)
Query: 440 NSFSEGNFIGEGLLGSVYKAELPGGKL---LAVKKLSNTVSQRQTDEEFLELASTISRLR 496
N + IGEG G V KA + L A+K++ S+ + EL
Sbjct: 15 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 74
Query: 497 HGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIR------------ 544
H NI+ L+G C G L +Y + L D L ++ I
Sbjct: 75 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 134
Query: 545 IRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELS 604
+ A AR + YL + +H + + NIL+ E + +++D GL+ G +
Sbjct: 135 LHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLS----RGQEVYVK 187
Query: 605 E--GLLTAHGSGAPEFESGSYSCQSDVYSLGVVMLELLT-GRKPY 646
+ G L Y+ SDV+S GV++ E+++ G PY
Sbjct: 188 KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPY 232
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 101/220 (45%), Gaps = 27/220 (12%)
Query: 448 IGEGLLGSVYKAEL------PGGKLLAVKKLSN-TVSQRQTDEEFLELASTISRLRHGNI 500
+GEG G V+ AE L+AVK L + T++ R+ +F A ++ L+H +I
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARK---DFQREAELLTNLQHEHI 79
Query: 501 VELIGYCNEHGQHLLVYDYGGNCTLHDLLHSD------------EEAHKKFSWNIRIRVA 548
V+ G C + ++V++Y + L+ L + +A + + + +A
Sbjct: 80 VKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIA 139
Query: 549 LGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLL 608
A + YL VH + + N L+ L+V++ D G++ ++S + +
Sbjct: 140 SQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTM 196
Query: 609 TAHGSGAPE-FESGSYSCQSDVYSLGVVMLELLT-GRKPY 646
PE ++ +SDV+S GV++ E+ T G++P+
Sbjct: 197 LPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPW 236
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 89/225 (39%), Gaps = 25/225 (11%)
Query: 440 NSFSEGNFIGEGLLGSVYKAELPGGKL---LAVKKLSNTVSQRQTDEEFLELASTISRLR 496
N + IGEG G V KA + L A+K++ S+ + EL
Sbjct: 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 84
Query: 497 HGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIR------------ 544
H NI+ L+G C G L +Y + L D L ++ I
Sbjct: 85 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 144
Query: 545 IRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELS 604
+ A AR + YL + +H + + NIL+ E + +++D GL+ G +
Sbjct: 145 LHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLS----RGQEVYVK 197
Query: 605 E--GLLTAHGSGAPEFESGSYSCQSDVYSLGVVMLELLT-GRKPY 646
+ G L Y+ SDV+S GV++ E+++ G PY
Sbjct: 198 KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPY 242
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 94/210 (44%), Gaps = 17/210 (8%)
Query: 440 NSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHG 498
+F + IGEG G VYKA G+++A+KK+ + S + L H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 499 NIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYL 558
NIV+L+ + + LV+++ LH D + S I + L + Q L
Sbjct: 67 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 117
Query: 559 Q--EVCEP-PIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGA 615
Q C ++H + K N+L++ + ++++D GLA F + ++T A
Sbjct: 118 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYTHEVVTL-WYRA 175
Query: 616 PEFESGS--YSCQSDVYSLGVVMLELLTGR 643
PE G YS D++SLG + E++T R
Sbjct: 176 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 97/218 (44%), Gaps = 29/218 (13%)
Query: 449 GEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCN 508
G G V+KA+L +AVK + +Q+ + E+ ST ++H N+++ I
Sbjct: 24 ARGRFGCVWKAQLMN-DFVAVKIFP--LQDKQSWQSEREIFSTPG-MKHENLLQFIA-AE 78
Query: 509 EHGQHL-----LVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVC- 562
+ G +L L+ + +L D L + +WN VA +R L YL E
Sbjct: 79 KRGSNLEVELWLITAFHDKGSLTDYLKGN-----IITWNELCHVAETMSRGLSYLHEDVP 133
Query: 563 -------EPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGA 615
+P I H +FKS N+LL L ++D GLA G + G + A
Sbjct: 134 WCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMA 193
Query: 616 PEFESGSYSCQS------DVYSLGVVMLELLTGRKPYD 647
PE G+ + Q D+Y++G+V+ EL++ K D
Sbjct: 194 PEVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAAD 231
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 94/210 (44%), Gaps = 17/210 (8%)
Query: 440 NSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHG 498
+F + IGEG G VYKA G+++A+KK+ + S + L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 499 NIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYL 558
NIV+L+ + + LV+++ LH D + S I + L + Q L
Sbjct: 63 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 559 Q--EVCEP-PIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGA 615
Q C ++H + K N+L++ + ++++D GLA F + ++T A
Sbjct: 114 QGLSFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYTHEVVTL-WYRA 171
Query: 616 PEFESGS--YSCQSDVYSLGVVMLELLTGR 643
PE G YS D++SLG + E++T R
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 94/210 (44%), Gaps = 17/210 (8%)
Query: 440 NSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHG 498
+F + IGEG G VYKA G+++A+KK+ + S + L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 499 NIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYL 558
NIV+L+ + + LV+++ LH D + S I + L + Q L
Sbjct: 63 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 559 Q--EVCEP-PIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGA 615
Q C ++H + K N+L++ + ++++D GLA F + ++T A
Sbjct: 114 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYTHEVVTL-WYRA 171
Query: 616 PEFESGS--YSCQSDVYSLGVVMLELLTGR 643
PE G YS D++SLG + E++T R
Sbjct: 172 PEILLGXKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 91/210 (43%), Gaps = 31/210 (14%)
Query: 448 IGEGLLGSVYKAELP-----GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVE 502
+G+G GSV G+++AVKKL ++ + D F + L+H NIV+
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD--FEREIEILKSLQHDNIVK 74
Query: 503 LIGYCNEHGQH--LLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQE 560
G C G+ L+ +Y +L D L +E + + LQY +
Sbjct: 75 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-------------IDHIKLLQYTSQ 121
Query: 561 VCE-------PPIVHGNFKSSNILLDEKLIVRVSDCGLAPLL-FSGSTNELSEGLLTAHG 612
+C+ +H + + NIL++ + V++ D GL +L ++ E +
Sbjct: 122 ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 181
Query: 613 SGAPE-FESGSYSCQSDVYSLGVVMLELLT 641
APE +S SDV+S GVV+ EL T
Sbjct: 182 WYAPESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 91/210 (43%), Gaps = 31/210 (14%)
Query: 448 IGEGLLGSVYKAELP-----GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVE 502
+G+G GSV G+++AVKKL ++ + D F + L+H NIV+
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD--FEREIEILKSLQHDNIVK 79
Query: 503 LIGYCNEHGQH--LLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQE 560
G C G+ L+ +Y +L D L +E + + LQY +
Sbjct: 80 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-------------IDHIKLLQYTSQ 126
Query: 561 VCE-------PPIVHGNFKSSNILLDEKLIVRVSDCGLAPLL-FSGSTNELSEGLLTAHG 612
+C+ +H + + NIL++ + V++ D GL +L ++ E +
Sbjct: 127 ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 186
Query: 613 SGAPE-FESGSYSCQSDVYSLGVVMLELLT 641
APE +S SDV+S GVV+ EL T
Sbjct: 187 WYAPESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 94/210 (44%), Gaps = 17/210 (8%)
Query: 440 NSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHG 498
+F + IGEG G VYKA G+++A+KK+ + S + L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 499 NIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYL 558
NIV+L+ + + LV+++ LH D + S I + L + Q L
Sbjct: 63 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 559 Q--EVCEP-PIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGA 615
Q C ++H + K N+L++ + ++++D GLA F + ++T A
Sbjct: 114 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYTHEVVTL-WYRA 171
Query: 616 PEFESGS--YSCQSDVYSLGVVMLELLTGR 643
PE G YS D++SLG + E++T R
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 94/210 (44%), Gaps = 17/210 (8%)
Query: 440 NSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHG 498
+F + IGEG G VYKA G+++A+KK+ + S + L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 499 NIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYL 558
NIV+L+ + + LV+++ LH D + S I + L + Q L
Sbjct: 62 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 112
Query: 559 Q--EVCEP-PIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGA 615
Q C ++H + K N+L++ + ++++D GLA F + ++T A
Sbjct: 113 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYTHEVVTL-WYRA 170
Query: 616 PEFESGS--YSCQSDVYSLGVVMLELLTGR 643
PE G YS D++SLG + E++T R
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 95/216 (43%), Gaps = 24/216 (11%)
Query: 434 SLQQYTNSFSEGNFIGEGLLGSVYKAE-LPGGKLLAVKKLSNTVSQRQTDEEFLELASTI 492
S+++Y N +GEG G V K G+++A+KK + + + + +
Sbjct: 23 SMEKYENL----GLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLL 78
Query: 493 SRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHS----DEEAHKKFSWNIRIRVA 548
+LRH N+V L+ C + + LV+++ + L DL D + +K+ + I +
Sbjct: 79 KQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIG 138
Query: 549 LGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLL 608
+ I+H + K NIL+ + +V++ D G A L + E+ + +
Sbjct: 139 FCHSHN-----------IIHRDIKPENILVSQSGVVKLCDFGFARTL--AAPGEVYDDEV 185
Query: 609 TAHGSGAPEFESG--SYSCQSDVYSLGVVMLELLTG 642
APE G Y DV+++G ++ E+ G
Sbjct: 186 ATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMG 221
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 94/210 (44%), Gaps = 17/210 (8%)
Query: 440 NSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHG 498
+F + IGEG G VYKA G+++A+KK+ + S + L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 499 NIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYL 558
NIV+L+ + + LV+++ LH D + S I + L + Q L
Sbjct: 62 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 112
Query: 559 Q--EVCEP-PIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGA 615
Q C ++H + K N+L++ + ++++D GLA F + ++T A
Sbjct: 113 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYTHEVVTL-WYRA 170
Query: 616 PEFESGS--YSCQSDVYSLGVVMLELLTGR 643
PE G YS D++SLG + E++T R
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 91/210 (43%), Gaps = 31/210 (14%)
Query: 448 IGEGLLGSVYKAELP-----GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVE 502
+G+G GSV G+++AVKKL ++ + D F + L+H NIV+
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD--FEREIEILKSLQHDNIVK 75
Query: 503 LIGYCNEHGQH--LLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQE 560
G C G+ L+ +Y +L D L +E + + LQY +
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-------------IDHIKLLQYTSQ 122
Query: 561 VCE-------PPIVHGNFKSSNILLDEKLIVRVSDCGLAPLL-FSGSTNELSEGLLTAHG 612
+C+ +H + + NIL++ + V++ D GL +L ++ E +
Sbjct: 123 ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 182
Query: 613 SGAPE-FESGSYSCQSDVYSLGVVMLELLT 641
APE +S SDV+S GVV+ EL T
Sbjct: 183 WYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 91/210 (43%), Gaps = 31/210 (14%)
Query: 448 IGEGLLGSVYKAELP-----GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVE 502
+G+G GSV G+++AVKKL ++ + D F + L+H NIV+
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD--FEREIEILKSLQHDNIVK 81
Query: 503 LIGYCNEHGQH--LLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQE 560
G C G+ L+ +Y +L D L +E + + LQY +
Sbjct: 82 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-------------IDHIKLLQYTSQ 128
Query: 561 VCE-------PPIVHGNFKSSNILLDEKLIVRVSDCGLAPLL-FSGSTNELSEGLLTAHG 612
+C+ +H + + NIL++ + V++ D GL +L ++ E +
Sbjct: 129 ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 188
Query: 613 SGAPE-FESGSYSCQSDVYSLGVVMLELLT 641
APE +S SDV+S GVV+ EL T
Sbjct: 189 WYAPESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 100/219 (45%), Gaps = 15/219 (6%)
Query: 442 FSEGNFIGEGLLGSVYKAELPG-GKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNI 500
F + +G G G V+ ++ GKL A KKL+ +++ + + I H
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246
Query: 501 VELIGYCNEHGQHL---LVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQY 557
+ + Y E L + GG+ H +++ +E + F R A+ +
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYH--IYNVDEDNPGFQ---EPRAIFYTAQIVSG 301
Query: 558 LQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPE 617
L+ + + I++ + K N+LLD+ VR+SD GLA L +G T ++G G APE
Sbjct: 302 LEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGTPGFMAPE 359
Query: 618 FESG-SYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQ 655
G Y D ++LGV + E++ R P+ R RGE+
Sbjct: 360 LLLGEEYDFSVDYFALGVTLYEMIAARGPF---RARGEK 395
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 100/219 (45%), Gaps = 15/219 (6%)
Query: 442 FSEGNFIGEGLLGSVYKAELPG-GKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNI 500
F + +G G G V+ ++ GKL A KKL+ +++ + + I H
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246
Query: 501 VELIGYCNEHGQHL---LVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQY 557
+ + Y E L + GG+ H +++ +E + F R A+ +
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYH--IYNVDEDNPGFQ---EPRAIFYTAQIVSG 301
Query: 558 LQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPE 617
L+ + + I++ + K N+LLD+ VR+SD GLA L +G T ++G G APE
Sbjct: 302 LEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGTPGFMAPE 359
Query: 618 FESG-SYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQ 655
G Y D ++LGV + E++ R P+ R RGE+
Sbjct: 360 LLLGEEYDFSVDYFALGVTLYEMIAARGPF---RARGEK 395
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 94/210 (44%), Gaps = 17/210 (8%)
Query: 440 NSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHG 498
+F + IGEG G VYKA G+++A+KK+ + S + L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 499 NIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYL 558
NIV+L+ + + LV+++ LH D + S I + L + Q L
Sbjct: 63 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 559 Q--EVCEP-PIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGA 615
Q C ++H + K N+L++ + ++++D GLA F + ++T A
Sbjct: 114 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYTHEVVTL-WYRA 171
Query: 616 PEFESGS--YSCQSDVYSLGVVMLELLTGR 643
PE G YS D++SLG + E++T R
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 91/210 (43%), Gaps = 31/210 (14%)
Query: 448 IGEGLLGSVYKAELP-----GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVE 502
+G+G GSV G+++AVKKL ++ + D F + L+H NIV+
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD--FEREIEILKSLQHDNIVK 80
Query: 503 LIGYCNEHGQH--LLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQE 560
G C G+ L+ +Y +L D L +E + + LQY +
Sbjct: 81 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-------------IDHIKLLQYTSQ 127
Query: 561 VCE-------PPIVHGNFKSSNILLDEKLIVRVSDCGLAPLL-FSGSTNELSEGLLTAHG 612
+C+ +H + + NIL++ + V++ D GL +L ++ E +
Sbjct: 128 ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 187
Query: 613 SGAPE-FESGSYSCQSDVYSLGVVMLELLT 641
APE +S SDV+S GVV+ EL T
Sbjct: 188 WYAPESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 94/210 (44%), Gaps = 17/210 (8%)
Query: 440 NSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHG 498
+F + IGEG G VYKA G+++A+KK+ + S + L H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 499 NIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYL 558
NIV+L+ + + LV+++ LH D + S I + L + Q L
Sbjct: 64 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 114
Query: 559 Q--EVCEP-PIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGA 615
Q C ++H + K N+L++ + ++++D GLA F + ++T A
Sbjct: 115 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYTHEVVTL-WYRA 172
Query: 616 PEFESGS--YSCQSDVYSLGVVMLELLTGR 643
PE G YS D++SLG + E++T R
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 100/219 (45%), Gaps = 15/219 (6%)
Query: 442 FSEGNFIGEGLLGSVYKAELPG-GKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNI 500
F + +G G G V+ ++ GKL A KKL+ +++ + + I H
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246
Query: 501 VELIGYCNEHGQHL---LVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQY 557
+ + Y E L + GG+ H +++ +E + F R A+ +
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYH--IYNVDEDNPGFQ---EPRAIFYTAQIVSG 301
Query: 558 LQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPE 617
L+ + + I++ + K N+LLD+ VR+SD GLA L +G T ++G G APE
Sbjct: 302 LEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGTPGFMAPE 359
Query: 618 FESG-SYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQ 655
G Y D ++LGV + E++ R P+ R RGE+
Sbjct: 360 LLLGEEYDFSVDYFALGVTLYEMIAARGPF---RARGEK 395
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 117/283 (41%), Gaps = 41/283 (14%)
Query: 448 IGEGLLGSVYKA---ELPGGKL---LAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIV 501
+G+G G VY+ ++ G+ +AVK ++ + S R+ E FL AS + ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE-FLNEASVMKGFTCHHVV 83
Query: 502 ELIGYCNEHGQHLLVYDYGGNCTLHDLLHS------DEEAHKKFSWNIRIRVALGAARAL 555
L+G ++ L+V + + L L S + + I++A A +
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 556 QYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLF-SGSTNELSEGLLTAHGSG 614
YL VH N + N ++ V++ D G+ ++ + + +GLL
Sbjct: 144 AYLNA---KKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 200
Query: 615 APEFESGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSR 673
+ G ++ SD++S GVV+ E+ + +PY Q L + +
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITSLAEQPY--------QGLSNEQVLKF-------- 244
Query: 674 MVDPSLDGAYLAK---SLSRFADIISRCVQWEPGFRPPMSEIV 713
+DG YL + R D++ C Q+ P RP EIV
Sbjct: 245 ----VMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIV 283
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 91/210 (43%), Gaps = 31/210 (14%)
Query: 448 IGEGLLGSVYKAELP-----GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVE 502
+G+G GSV G+++AVKKL ++ + D F + L+H NIV+
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD--FEREIEILKSLQHDNIVK 73
Query: 503 LIGYCNEHGQH--LLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQE 560
G C G+ L+ +Y +L D L +E + + LQY +
Sbjct: 74 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-------------IDHIKLLQYTSQ 120
Query: 561 VCE-------PPIVHGNFKSSNILLDEKLIVRVSDCGLAPLL-FSGSTNELSEGLLTAHG 612
+C+ +H + + NIL++ + V++ D GL +L ++ E +
Sbjct: 121 ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 180
Query: 613 SGAPE-FESGSYSCQSDVYSLGVVMLELLT 641
APE +S SDV+S GVV+ EL T
Sbjct: 181 WYAPESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 91/210 (43%), Gaps = 31/210 (14%)
Query: 448 IGEGLLGSVYKAELP-----GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVE 502
+G+G GSV G+++AVKKL ++ + D F + L+H NIV+
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD--FEREIEILKSLQHDNIVK 106
Query: 503 LIGYCNEHGQH--LLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQE 560
G C G+ L+ +Y +L D L +E + + LQY +
Sbjct: 107 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-------------IDHIKLLQYTSQ 153
Query: 561 VCE-------PPIVHGNFKSSNILLDEKLIVRVSDCGLAPLL-FSGSTNELSEGLLTAHG 612
+C+ +H + + NIL++ + V++ D GL +L ++ E +
Sbjct: 154 ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 213
Query: 613 SGAPE-FESGSYSCQSDVYSLGVVMLELLT 641
APE +S SDV+S GVV+ EL T
Sbjct: 214 WYAPESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 117/283 (41%), Gaps = 41/283 (14%)
Query: 448 IGEGLLGSVYKA---ELPGGKL---LAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIV 501
+G+G G VY+ ++ G+ +AVK ++ + S R+ E FL AS + ++V
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE-FLNEASVMKGFTCHHVV 84
Query: 502 ELIGYCNEHGQHLLVYDYGGNCTLHDLLHS------DEEAHKKFSWNIRIRVALGAARAL 555
L+G ++ L+V + + L L S + + I++A A +
Sbjct: 85 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 144
Query: 556 QYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLF-SGSTNELSEGLLTAHGSG 614
YL VH N + N ++ V++ D G+ ++ + + +GLL
Sbjct: 145 AYLNA---KKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 201
Query: 615 APEFESGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSR 673
+ G ++ SD++S GVV+ E+ + +PY Q L + +
Sbjct: 202 PESLKDGVFTTSSDMWSFGVVLWEITSLAEQPY--------QGLSNEQVLKF-------- 245
Query: 674 MVDPSLDGAYLAK---SLSRFADIISRCVQWEPGFRPPMSEIV 713
+DG YL + R D++ C Q+ P RP EIV
Sbjct: 246 ----VMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIV 284
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 91/210 (43%), Gaps = 31/210 (14%)
Query: 448 IGEGLLGSVYKAELP-----GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVE 502
+G+G GSV G+++AVKKL ++ + D F + L+H NIV+
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD--FEREIEILKSLQHDNIVK 78
Query: 503 LIGYCNEHGQH--LLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQE 560
G C G+ L+ +Y +L D L +E + + LQY +
Sbjct: 79 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-------------IDHIKLLQYTSQ 125
Query: 561 VCE-------PPIVHGNFKSSNILLDEKLIVRVSDCGLAPLL-FSGSTNELSEGLLTAHG 612
+C+ +H + + NIL++ + V++ D GL +L ++ E +
Sbjct: 126 ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 185
Query: 613 SGAPE-FESGSYSCQSDVYSLGVVMLELLT 641
APE +S SDV+S GVV+ EL T
Sbjct: 186 WYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 91/210 (43%), Gaps = 31/210 (14%)
Query: 448 IGEGLLGSVYKAELP-----GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVE 502
+G+G GSV G+++AVKKL ++ + D F + L+H NIV+
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD--FEREIEILKSLQHDNIVK 75
Query: 503 LIGYCNEHGQH--LLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQE 560
G C G+ L+ +Y +L D L +E + + LQY +
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-------------IDHIKLLQYTSQ 122
Query: 561 VCE-------PPIVHGNFKSSNILLDEKLIVRVSDCGLAPLL-FSGSTNELSEGLLTAHG 612
+C+ +H + + NIL++ + V++ D GL +L ++ E +
Sbjct: 123 ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 182
Query: 613 SGAPE-FESGSYSCQSDVYSLGVVMLELLT 641
APE +S SDV+S GVV+ EL T
Sbjct: 183 WYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 100/219 (45%), Gaps = 15/219 (6%)
Query: 442 FSEGNFIGEGLLGSVYKAELPG-GKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNI 500
F + +G G G V+ ++ GKL A KKL+ +++ + + I H
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246
Query: 501 VELIGYCNEHGQHL---LVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQY 557
+ + Y E L + GG+ H +++ +E + F R A+ +
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYH--IYNVDEDNPGFQ---EPRAIFYTAQIVSG 301
Query: 558 LQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPE 617
L+ + + I++ + K N+LLD+ VR+SD GLA L +G T ++G G APE
Sbjct: 302 LEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGTPGFMAPE 359
Query: 618 FESG-SYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQ 655
G Y D ++LGV + E++ R P+ R RGE+
Sbjct: 360 LLLGEEYDFSVDYFALGVTLYEMIAARGPF---RARGEK 395
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 97/225 (43%), Gaps = 23/225 (10%)
Query: 431 TIASLQQYTNSFSEGNFIGEGLLGSVYKAE-LPGGKLLAVKKLSNTVSQRQTDEEFLELA 489
T A Q + ++ IG+G V A + GK +AVK + T + ++
Sbjct: 5 TSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREV 64
Query: 490 STISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLL-----HSDEEAHKKFSWNIR 544
L H NIV+L LV +Y + D L ++EA KF +
Sbjct: 65 RIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVS 124
Query: 545 IRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELS 604
A+QY + IVH + K+ N+LLD ++++D G + G N+L
Sbjct: 125 ---------AVQYCHQKF---IVHRDLKAENLLLDADXNIKIADFGFSNEFTFG--NKL- 169
Query: 605 EGLLTAHGSGAPE-FESGSYSC-QSDVYSLGVVMLELLTGRKPYD 647
+ A APE F+ Y + DV+SLGV++ L++G P+D
Sbjct: 170 DAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 91/210 (43%), Gaps = 31/210 (14%)
Query: 448 IGEGLLGSVYKAELP-----GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVE 502
+G+G GSV G+++AVKKL ++ + D F + L+H NIV+
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD--FEREIEILKSLQHDNIVK 82
Query: 503 LIGYCNEHGQH--LLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQE 560
G C G+ L+ +Y +L D L +E + + LQY +
Sbjct: 83 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-------------IDHIKLLQYTSQ 129
Query: 561 VCE-------PPIVHGNFKSSNILLDEKLIVRVSDCGLAPLL-FSGSTNELSEGLLTAHG 612
+C+ +H + + NIL++ + V++ D GL +L ++ E +
Sbjct: 130 ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 189
Query: 613 SGAPE-FESGSYSCQSDVYSLGVVMLELLT 641
APE +S SDV+S GVV+ EL T
Sbjct: 190 WYAPESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 95/213 (44%), Gaps = 33/213 (15%)
Query: 448 IGEGLLGSVYKAE-LPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGY 506
IG+G V A + G+ +AVK + T + ++ + L H NIV+L
Sbjct: 23 IGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 507 CNEHGQHLLVYDYGGNCTLHDLL-----HSDEEAHKKFSWNIRIRVALGAARALQYLQEV 561
LV +Y + D L ++EA KF + A+QY +
Sbjct: 83 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS---------AVQYCHQ- 132
Query: 562 CEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEG--LLTAHGS---GAP 616
IVH + K+ N+LLD + ++++D G +NE + G L T GS AP
Sbjct: 133 --KYIVHRDLKAENLLLDGDMNIKIADFGF--------SNEFTVGNKLDTFCGSPPYAAP 182
Query: 617 E-FESGSYSC-QSDVYSLGVVMLELLTGRKPYD 647
E F+ Y + DV+SLGV++ L++G P+D
Sbjct: 183 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 108/242 (44%), Gaps = 19/242 (7%)
Query: 445 GNFI--GEGLLGSVYKA-ELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISR-LRHGNI 500
NFI GEG G V A E GK +AVKK+ QR+ E L I R H N+
Sbjct: 48 ANFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRR---ELLFNEVVIMRDYHHDNV 104
Query: 501 VELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQE 560
V++ + +V ++ L D++ H + + V L RAL YL
Sbjct: 105 VDMYSSYLVGDELWVVMEFLEGGALTDIV-----THTRMNEEQIATVCLSVLRALSYLHN 159
Query: 561 VCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFES 620
++H + KS +ILL +++SD G + + L+ APE S
Sbjct: 160 ---QGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKR--KXLVGTPYWMAPEVIS 214
Query: 621 G-SYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAI-PRLHDIDALSRMVDPS 678
Y + D++SLG++++E++ G PY P +R ++ PR+ D+ +S ++
Sbjct: 215 RLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDSLPPRVKDLHKVSSVLRGF 274
Query: 679 LD 680
LD
Sbjct: 275 LD 276
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 94/212 (44%), Gaps = 17/212 (8%)
Query: 438 YTNSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLR 496
+ +F + IGEG G VYKA G+++A+KK+ + S + L
Sbjct: 2 HMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 497 HGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQ 556
H NIV+L+ + + LV+++ LH D + S I + L + Q
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQ 112
Query: 557 YLQ--EVCEPP-IVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGS 613
LQ C ++H + K N+L++ + ++++D GLA F ++T
Sbjct: 113 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVVTL-WY 170
Query: 614 GAPEFESGS--YSCQSDVYSLGVVMLELLTGR 643
APE G YS D++SLG + E++T R
Sbjct: 171 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 93/210 (44%), Gaps = 17/210 (8%)
Query: 440 NSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHG 498
+F + IGEG G VYKA G+++A+KK+ + S + L H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 499 NIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYL 558
NIV+L+ + + LV+++ LH D + S I + L + Q L
Sbjct: 66 NIVKLLDVIHTENKLYLVFEF---------LHQDLKTFMDASALTGIPLPLIKSYLFQLL 116
Query: 559 Q--EVCEP-PIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGA 615
Q C ++H + K N+L++ + ++++D GLA F ++T A
Sbjct: 117 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVVTL-WYRA 174
Query: 616 PEFESGS--YSCQSDVYSLGVVMLELLTGR 643
PE G YS D++SLG + E++T R
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 91/213 (42%), Gaps = 37/213 (17%)
Query: 448 IGEGLLGSVYKAELP-----GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVE 502
+G+G GSV G+++AVKKL ++ + D F + L+H NIV+
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD--FEREIEILKSLQHDNIVK 75
Query: 503 LIGYCNEHGQH--LLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQE 560
G C G+ L+ +Y +L D L +E + + LQY +
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-------------IDHIKLLQYTSQ 122
Query: 561 VCE-------PPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGS----TNELSEGLLT 609
+C+ +H + + NIL++ + V++ D GL +L E E +
Sbjct: 123 ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIF 182
Query: 610 AHGSGAPE-FESGSYSCQSDVYSLGVVMLELLT 641
+ APE +S SDV+S GVV+ EL T
Sbjct: 183 WY---APESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 91/210 (43%), Gaps = 31/210 (14%)
Query: 448 IGEGLLGSVYKAELP-----GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVE 502
+G+G GSV G+++AVKKL ++ + D F + L+H NIV+
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD--FEREIEILKSLQHDNIVK 93
Query: 503 LIGYCNEHGQH--LLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQE 560
G C G+ L+ +Y +L D L +E + + LQY +
Sbjct: 94 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-------------IDHIKLLQYTSQ 140
Query: 561 VCE-------PPIVHGNFKSSNILLDEKLIVRVSDCGLAPLL-FSGSTNELSEGLLTAHG 612
+C+ +H + + NIL++ + V++ D GL +L ++ E +
Sbjct: 141 ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 200
Query: 613 SGAPE-FESGSYSCQSDVYSLGVVMLELLT 641
APE +S SDV+S GVV+ EL T
Sbjct: 201 WYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 91/210 (43%), Gaps = 31/210 (14%)
Query: 448 IGEGLLGSVYKAELP-----GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVE 502
+G+G GSV G+++AVKKL ++ + D F + L+H NIV+
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD--FEREIEILKSLQHDNIVK 78
Query: 503 LIGYCNEHGQH--LLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQE 560
G C G+ L+ +Y +L D L + E + + LQY +
Sbjct: 79 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAER-------------IDHIKLLQYTSQ 125
Query: 561 VCE-------PPIVHGNFKSSNILLDEKLIVRVSDCGLAPLL-FSGSTNELSEGLLTAHG 612
+C+ +H + + NIL++ + V++ D GL +L ++ E +
Sbjct: 126 ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 185
Query: 613 SGAPE-FESGSYSCQSDVYSLGVVMLELLT 641
APE +S SDV+S GVV+ EL T
Sbjct: 186 WYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 91/210 (43%), Gaps = 31/210 (14%)
Query: 448 IGEGLLGSVYKAELP-----GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVE 502
+G+G GSV G+++AVKKL ++ + D F + L+H NIV+
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD--FEREIEILKSLQHDNIVK 93
Query: 503 LIGYCNEHGQH--LLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQE 560
G C G+ L+ +Y +L D L +E + + LQY +
Sbjct: 94 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-------------IDHIKLLQYTSQ 140
Query: 561 VCE-------PPIVHGNFKSSNILLDEKLIVRVSDCGLAPLL-FSGSTNELSEGLLTAHG 612
+C+ +H + + NIL++ + V++ D GL +L ++ E +
Sbjct: 141 ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 200
Query: 613 SGAPE-FESGSYSCQSDVYSLGVVMLELLT 641
APE +S SDV+S GVV+ EL T
Sbjct: 201 WYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 116/287 (40%), Gaps = 33/287 (11%)
Query: 440 NSFSEGNFIGEGLLGSVYKAELPG-GK-----LLAVKKLSNTVSQRQTDEEFLELASTIS 493
N+ G +G G G V +A G GK +AVK L +T + + EL
Sbjct: 38 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 97
Query: 494 RLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLH-----SDEEAHKKFSWNIRIRVA 548
+H NIV L+G C G L++ +Y C DLL+ ++ + K+ + +R
Sbjct: 98 LGQHENIVNLLGACTHGGPVLVITEY---CCYGDLLNFLRRKAEADLDKEDGRPLELRDL 154
Query: 549 LG-AARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGL 607
L +++ Q + + +H + + N+LL + ++ D GLA + + S +
Sbjct: 155 LHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNA 214
Query: 608 LTAHGSGAPE-FESGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRL 665
APE Y+ QSDV+S G+++ E+ + G PY P +
Sbjct: 215 RLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY----------------PGI 258
Query: 666 HDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEI 712
++V A A + I+ C EP RP +I
Sbjct: 259 LVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQI 305
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 95/213 (44%), Gaps = 33/213 (15%)
Query: 448 IGEGLLGSVYKAE-LPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGY 506
IG+G V A + G+ +A+K + T + ++ + L H NIV+L
Sbjct: 20 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 79
Query: 507 CNEHGQHLLVYDYGGNCTLHDLL-----HSDEEAHKKFSWNIRIRVALGAARALQYLQEV 561
L+ +Y + D L ++EA KF + A+QY +
Sbjct: 80 IETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVS---------AVQYCHQ- 129
Query: 562 CEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEG--LLTAHGS---GAP 616
IVH + K+ N+LLD + ++++D G +NE + G L T GS AP
Sbjct: 130 --KRIVHRDLKAENLLLDADMNIKIADFGF--------SNEFTVGGKLDTFCGSPPYAAP 179
Query: 617 E-FESGSYSC-QSDVYSLGVVMLELLTGRKPYD 647
E F+ Y + DV+SLGV++ L++G P+D
Sbjct: 180 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 212
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 93/210 (44%), Gaps = 17/210 (8%)
Query: 440 NSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHG 498
+F + IGEG G VYKA G+++A+KK+ + S + L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 499 NIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYL 558
NIV+L+ + + LV+++ LH D + S I + L + Q L
Sbjct: 63 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 559 Q--EVCEP-PIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGA 615
Q C ++H + K N+L++ + ++++D GLA F ++T A
Sbjct: 114 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVVTL-WYRA 171
Query: 616 PEFESGS--YSCQSDVYSLGVVMLELLTGR 643
PE G YS D++SLG + E++T R
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 93/210 (44%), Gaps = 17/210 (8%)
Query: 440 NSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHG 498
+F + IGEG G VYKA G+++A+KK+ + S + L H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 499 NIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYL 558
NIV+L+ + + LV+++ LH D + S I + L + Q L
Sbjct: 66 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 116
Query: 559 Q--EVCEP-PIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGA 615
Q C ++H + K N+L++ + ++++D GLA F ++T A
Sbjct: 117 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVVTL-WYRA 174
Query: 616 PEFESGS--YSCQSDVYSLGVVMLELLTGR 643
PE G YS D++SLG + E++T R
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 93/210 (44%), Gaps = 17/210 (8%)
Query: 440 NSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHG 498
+F + IGEG G VYKA G+++A+KK+ + S + L H
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 499 NIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYL 558
NIV+L+ + + LV+++ LH D + S I + L + Q L
Sbjct: 65 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 115
Query: 559 Q--EVCEP-PIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGA 615
Q C ++H + K N+L++ + ++++D GLA F ++T A
Sbjct: 116 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVVTL-WYRA 173
Query: 616 PEFESGS--YSCQSDVYSLGVVMLELLTGR 643
PE G YS D++SLG + E++T R
Sbjct: 174 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 120/286 (41%), Gaps = 32/286 (11%)
Query: 432 IASLQQYTNSFSEGNFIGEGLLGSVYKAELPGGK-LLAVKKLSNTVSQRQTDEEFLELAS 490
+ S Q F G +G+G G+VY A K +LA+K L ++ E L
Sbjct: 3 LGSRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 62
Query: 491 TI-SRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVAL 549
I S LRH NI+ L GY ++ + L+ +Y T++ L + KF
Sbjct: 63 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYIT 118
Query: 550 GAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLT 609
A AL Y ++H + K N+LL ++++D G + S ++L L
Sbjct: 119 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTL-- 173
Query: 610 AHGSGAPEFESGS-YSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDI 668
PE G + + D++SLGV+ E L G+ P+ E + + R+ +
Sbjct: 174 --DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-------EANTYQETYKRISRV 224
Query: 669 DALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQ 714
+ D +GA D+ISR ++ P RP + E+++
Sbjct: 225 EFT--FPDFVTEGA---------RDLISRLLKHNPSQRPMLREVLE 259
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 93/210 (44%), Gaps = 17/210 (8%)
Query: 440 NSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHG 498
+F + IGEG G VYKA G+++A+KK+ + S + L H
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 499 NIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYL 558
NIV+L+ + + LV+++ LH D + S I + L + Q L
Sbjct: 65 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 115
Query: 559 Q--EVCEP-PIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGA 615
Q C ++H + K N+L++ + ++++D GLA F ++T A
Sbjct: 116 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVVTL-WYRA 173
Query: 616 PEFESGS--YSCQSDVYSLGVVMLELLTGR 643
PE G YS D++SLG + E++T R
Sbjct: 174 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 93/210 (44%), Gaps = 17/210 (8%)
Query: 440 NSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHG 498
+F + IGEG G VYKA G+++A+KK+ + S + L H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 499 NIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYL 558
NIV+L+ + + LV+++ LH D + S I + L + Q L
Sbjct: 66 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 116
Query: 559 Q--EVCEP-PIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGA 615
Q C ++H + K N+L++ + ++++D GLA F ++T A
Sbjct: 117 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVVTL-WYRA 174
Query: 616 PEFESGS--YSCQSDVYSLGVVMLELLTGR 643
PE G YS D++SLG + E++T R
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 93/210 (44%), Gaps = 17/210 (8%)
Query: 440 NSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHG 498
+F + IGEG G VYKA G+++A+KK+ + S + L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 499 NIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYL 558
NIV+L+ + + LV+++ LH D + S I + L + Q L
Sbjct: 62 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 112
Query: 559 Q--EVCEP-PIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGA 615
Q C ++H + K N+L++ + ++++D GLA F ++T A
Sbjct: 113 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVVTL-WYRA 170
Query: 616 PEFESGS--YSCQSDVYSLGVVMLELLTGR 643
PE G YS D++SLG + E++T R
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 93/210 (44%), Gaps = 17/210 (8%)
Query: 440 NSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHG 498
+F + IGEG G VYKA G+++A+KK+ + S + L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 499 NIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYL 558
NIV+L+ + + LV+++ LH D + S I + L + Q L
Sbjct: 62 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 112
Query: 559 Q--EVCEP-PIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGA 615
Q C ++H + K N+L++ + ++++D GLA F ++T A
Sbjct: 113 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVVTL-WYRA 170
Query: 616 PEFESGS--YSCQSDVYSLGVVMLELLTGR 643
PE G YS D++SLG + E++T R
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 93/210 (44%), Gaps = 17/210 (8%)
Query: 440 NSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHG 498
+F + IGEG G VYKA G+++A+KK+ + S + L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 499 NIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYL 558
NIV+L+ + + LV+++ LH D + S I + L + Q L
Sbjct: 63 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 559 Q--EVCEP-PIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGA 615
Q C ++H + K N+L++ + ++++D GLA F ++T A
Sbjct: 114 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVVTL-WYRA 171
Query: 616 PEFESGS--YSCQSDVYSLGVVMLELLTGR 643
PE G YS D++SLG + E++T R
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 93/210 (44%), Gaps = 17/210 (8%)
Query: 440 NSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHG 498
+F + IGEG G VYKA G+++A+KK+ + S + L H
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 499 NIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYL 558
NIV+L+ + + LV+++ LH D + S I + L + Q L
Sbjct: 65 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 115
Query: 559 Q--EVCEP-PIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGA 615
Q C ++H + K N+L++ + ++++D GLA F ++T A
Sbjct: 116 QGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVVTL-WYRA 173
Query: 616 PEFESGS--YSCQSDVYSLGVVMLELLTGR 643
PE G YS D++SLG + E++T R
Sbjct: 174 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 105/236 (44%), Gaps = 30/236 (12%)
Query: 440 NSFSEGNFIGEGLLGSVY---KAELPGGKLLAVKKLSNT-VSQRQTDEEFLELASTISRL 495
N FS IG G G VY KA+ GK+ A+K L + +Q + L +S +
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKAD--TGKMYAMKCLDKKRIKMKQGETLALNERIMLSLV 246
Query: 496 RHGNIVELIGYCNEHGQH-------LLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVA 548
G+ ++ C + H +L GG+ LH H FS +
Sbjct: 247 STGDCPFIV--CMSYAFHTPDKLSFILDLMNGGD------LHYHLSQHGVFS---EADMR 295
Query: 549 LGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLL 608
AA + L+ + +V+ + K +NILLDE VR+SD GLA FS S G
Sbjct: 296 FYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA-CDFSKKKPHASVG-- 352
Query: 609 TAHGSGAPE-FESG-SYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAI 662
HG APE + G +Y +D +SLG ++ +LL G P+ + + + + + R +
Sbjct: 353 -THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL 407
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 105/236 (44%), Gaps = 30/236 (12%)
Query: 440 NSFSEGNFIGEGLLGSVY---KAELPGGKLLAVKKLSNT-VSQRQTDEEFLELASTISRL 495
N FS IG G G VY KA+ GK+ A+K L + +Q + L +S +
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKAD--TGKMYAMKCLDKKRIKMKQGETLALNERIMLSLV 246
Query: 496 RHGNIVELIGYCNEHGQH-------LLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVA 548
G+ ++ C + H +L GG+ LH H FS +
Sbjct: 247 STGDCPFIV--CMSYAFHTPDKLSFILDLMNGGD------LHYHLSQHGVFS---EADMR 295
Query: 549 LGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLL 608
AA + L+ + +V+ + K +NILLDE VR+SD GLA FS S G
Sbjct: 296 FYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA-CDFSKKKPHASVG-- 352
Query: 609 TAHGSGAPE-FESG-SYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAI 662
HG APE + G +Y +D +SLG ++ +LL G P+ + + + + + R +
Sbjct: 353 -THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL 407
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 115/294 (39%), Gaps = 46/294 (15%)
Query: 445 GNFIGEGLLGSVYKAELPG------GKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHG 498
G +G G G V +A+ G + +AVK L + + EL I H
Sbjct: 32 GKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 91
Query: 499 NIVELIGYCNEHGQHLLV---YDYGGNCTLHDLLHSDE-----EAHKKF-SWNIRIRVAL 549
N+V L+G C + G L+V + GN + + +E + +K F + I +
Sbjct: 92 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSF 151
Query: 550 GAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLT 609
A+ +++L +H + + NILL EK +V++ D GLA ++
Sbjct: 152 QVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 208
Query: 610 AHGSGAPE-FESGSYSCQSDVYSLGVVMLELLT-GRKPY-----DRSRPRGEQSLVRWAI 662
APE Y+ QSDV+S GV++ E+ + G PY D R + R
Sbjct: 209 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRA 268
Query: 663 PRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDL 716
P + M+D C EP RP SE+V+ L
Sbjct: 269 PDYTTPEMYQTMLD---------------------CWHGEPSQRPTFSELVEHL 301
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 93/210 (44%), Gaps = 17/210 (8%)
Query: 440 NSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHG 498
+F + IGEG G VYKA G+++A+KK+ + S + L H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 499 NIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYL 558
NIV+L+ + + LV+++ LH D + S I + L + Q L
Sbjct: 67 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 117
Query: 559 Q--EVCEP-PIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGA 615
Q C ++H + K N+L++ + ++++D GLA F ++T A
Sbjct: 118 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVVTL-WYRA 175
Query: 616 PEFESGS--YSCQSDVYSLGVVMLELLTGR 643
PE G YS D++SLG + E++T R
Sbjct: 176 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 93/210 (44%), Gaps = 17/210 (8%)
Query: 440 NSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHG 498
+F + IGEG G VYKA G+++A+KK+ + S + L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 499 NIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYL 558
NIV+L+ + + LV+++ LH D + S I + L + Q L
Sbjct: 63 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 559 Q--EVCEP-PIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGA 615
Q C ++H + K N+L++ + ++++D GLA F ++T A
Sbjct: 114 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVVTL-WYRA 171
Query: 616 PEFESGS--YSCQSDVYSLGVVMLELLTGR 643
PE G YS D++SLG + E++T R
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 91/194 (46%), Gaps = 25/194 (12%)
Query: 467 LAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLH 526
+A+K L + T EE + A + +L + IV LIG C +LV + G LH
Sbjct: 40 VAIKVLKQGTEKADT-EEMMREAQIMHQLDNPYIVRLIGVCQAEAL-MLVMEMAGGGPLH 97
Query: 527 D-LLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVR 585
L+ EE + +V++G ++YL+ E VH + + N+LL + +
Sbjct: 98 KFLVGKREEIPVSNVAELLHQVSMG----MKYLE---EKNFVHRDLAARNVLLVNRHYAK 150
Query: 586 VSDCGLAPLLFSGSTNELSEGLLTAHGSG-------APE-FESGSYSCQSDVYSLGVVML 637
+SD GL+ L + + TA +G APE +S +SDV+S GV M
Sbjct: 151 ISDFGLSKALGA------DDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMW 204
Query: 638 ELLT-GRKPYDRSR 650
E L+ G+KPY + +
Sbjct: 205 EALSYGQKPYKKMK 218
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 93/210 (44%), Gaps = 17/210 (8%)
Query: 440 NSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHG 498
+F + IGEG G VYKA G+++A+KK+ + S + L H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 499 NIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYL 558
NIV+L+ + + LV+++ LH D + S I + L + Q L
Sbjct: 64 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 114
Query: 559 Q--EVCEP-PIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGA 615
Q C ++H + K N+L++ + ++++D GLA F ++T A
Sbjct: 115 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVVTL-WYRA 172
Query: 616 PEFESGS--YSCQSDVYSLGVVMLELLTGR 643
PE G YS D++SLG + E++T R
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 93/210 (44%), Gaps = 17/210 (8%)
Query: 440 NSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHG 498
+F + IGEG G VYKA G+++A+KK+ + S + L H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 499 NIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYL 558
NIV+L+ + + LV+++ LH D + S I + L + Q L
Sbjct: 64 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 114
Query: 559 Q--EVCEP-PIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGA 615
Q C ++H + K N+L++ + ++++D GLA F ++T A
Sbjct: 115 QGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVVTL-WYRA 172
Query: 616 PEFESGS--YSCQSDVYSLGVVMLELLTGR 643
PE G YS D++SLG + E++T R
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 94/212 (44%), Gaps = 13/212 (6%)
Query: 435 LQQYTNSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISR 494
Q + + +GEG G VYKA+ G+++A+K++ + S +
Sbjct: 16 FQGLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKE 75
Query: 495 LRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVAL-GAAR 553
L H NIV LI + LV+++ L +L ++ + I + L G A
Sbjct: 76 LHHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAH 134
Query: 554 ALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGS 613
Q+ I+H + K N+L++ ++++D GLA F + ++T
Sbjct: 135 CHQHR-------ILHRDLKPQNLLINSDGALKLADFGLA-RAFGIPVRSYTHEVVTL-WY 185
Query: 614 GAPEFESGS--YSCQSDVYSLGVVMLELLTGR 643
AP+ GS YS D++S+G + E++TG+
Sbjct: 186 RAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 105/236 (44%), Gaps = 30/236 (12%)
Query: 440 NSFSEGNFIGEGLLGSVY---KAELPGGKLLAVKKLSNT-VSQRQTDEEFLELASTISRL 495
N FS IG G G VY KA+ GK+ A+K L + +Q + L +S +
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKAD--TGKMYAMKCLDKKRIKMKQGETLALNERIMLSLV 246
Query: 496 RHGNIVELIGYCNEHGQH-------LLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVA 548
G+ ++ C + H +L GG+ LH H FS +
Sbjct: 247 STGDCPFIV--CMSYAFHTPDKLSFILDLMNGGD------LHYHLSQHGVFS---EADMR 295
Query: 549 LGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLL 608
AA + L+ + +V+ + K +NILLDE VR+SD GLA FS S G
Sbjct: 296 FYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA-CDFSKKKPHASVG-- 352
Query: 609 TAHGSGAPE-FESG-SYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAI 662
HG APE + G +Y +D +SLG ++ +LL G P+ + + + + + R +
Sbjct: 353 -THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL 407
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 93/210 (44%), Gaps = 17/210 (8%)
Query: 440 NSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHG 498
+F + IGEG G VYKA G+++A+KK+ + S + L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 499 NIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYL 558
NIV+L+ + + LV+++ LH D + S I + L + Q L
Sbjct: 63 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 559 Q--EVCEP-PIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGA 615
Q C ++H + K N+L++ + ++++D GLA F ++T A
Sbjct: 114 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVVTL-WYRA 171
Query: 616 PEFESGS--YSCQSDVYSLGVVMLELLTGR 643
PE G YS D++SLG + E++T R
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 113/296 (38%), Gaps = 48/296 (16%)
Query: 445 GNFIGEGLLGSVYKAELPG------GKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHG 498
G +G G G V +A+ G + +AVK L + + EL I H
Sbjct: 34 GKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 93
Query: 499 NIVELIGYCNEHGQHLLV-YDYGGNCTLHDLLHSD---------EEAHKKF-SWNIRIRV 547
N+V L+G C + G L+V ++ L L S E+ +K F + I
Sbjct: 94 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXY 153
Query: 548 ALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGL 607
+ A+ +++L +H + + NILL EK +V++ D GLA +
Sbjct: 154 SFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 210
Query: 608 LTAHGSGAPE-FESGSYSCQSDVYSLGVVMLELLT-GRKPY-----DRSRPRGEQSLVRW 660
APE Y+ QSDV+S GV++ E+ + G PY D R + R
Sbjct: 211 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRM 270
Query: 661 AIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDL 716
P + M+D C EP RP SE+V+ L
Sbjct: 271 RAPDYTTPEMYQTMLD---------------------CWHGEPSQRPTFSELVEHL 305
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 116/287 (40%), Gaps = 33/287 (11%)
Query: 440 NSFSEGNFIGEGLLGSVYKAELPG-GK-----LLAVKKLSNTVSQRQTDEEFLELASTIS 493
N+ G +G G G V +A G GK +AVK L +T + + EL
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 494 RLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLH-----SDEEAHKKFSWNIRIRVA 548
+H NIV L+G C G L++ +Y C DLL+ ++ + K+ + +R
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEY---CCYGDLLNFLRRKAEADLDKEDGRPLELRDL 162
Query: 549 LG-AARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGL 607
L +++ Q + + +H + + N+LL + ++ D GLA + + S +
Sbjct: 163 LHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNA 222
Query: 608 LTAHGSGAPE-FESGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRL 665
APE Y+ QSDV+S G+++ E+ + G PY P +
Sbjct: 223 RLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY----------------PGI 266
Query: 666 HDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEI 712
++V A A + I+ C EP RP +I
Sbjct: 267 LVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQI 313
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 105/236 (44%), Gaps = 30/236 (12%)
Query: 440 NSFSEGNFIGEGLLGSVY---KAELPGGKLLAVKKLSNT-VSQRQTDEEFLELASTISRL 495
N FS IG G G VY KA+ GK+ A+K L + +Q + L +S +
Sbjct: 188 NDFSVHRIIGRGGFGEVYGCRKAD--TGKMYAMKCLDKKRIKMKQGETLALNERIMLSLV 245
Query: 496 RHGNIVELIGYCNEHGQH-------LLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVA 548
G+ ++ C + H +L GG+ LH H FS +
Sbjct: 246 STGDCPFIV--CMSYAFHTPDKLSFILDLMNGGD------LHYHLSQHGVFS---EADMR 294
Query: 549 LGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLL 608
AA + L+ + +V+ + K +NILLDE VR+SD GLA FS S G
Sbjct: 295 FYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA-CDFSKKKPHASVG-- 351
Query: 609 TAHGSGAPE-FESG-SYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAI 662
HG APE + G +Y +D +SLG ++ +LL G P+ + + + + + R +
Sbjct: 352 -THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL 406
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 91/202 (45%), Gaps = 20/202 (9%)
Query: 448 IGEGLLGSVYKAE-LPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGY 506
IGEG G V+K G+++A+KK + + L + +L+H N+V L+
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 507 CNEHGQHLLVYDYGGNCTLHDLLHSD----EEAHKKFSWNIRIRVALGAARALQYLQEVC 562
+ LV++Y + LH+L E K +W + LQ +
Sbjct: 71 FRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITW-----------QTLQAVNFCH 119
Query: 563 EPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFESG- 621
+ +H + K NIL+ + ++++ D G A LL +G ++ + + T +PE G
Sbjct: 120 KHNCIHRDVKPENILITKHSVIKLCDFGFARLL-TGPSDYYDDEVATR-WYRSPELLVGD 177
Query: 622 -SYSCQSDVYSLGVVMLELLTG 642
Y DV+++G V ELL+G
Sbjct: 178 TQYGPPVDVWAIGCVFAELLSG 199
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 114/298 (38%), Gaps = 50/298 (16%)
Query: 445 GNFIGEGLLGSVYKAELPG------GKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHG 498
G +G G G V +A+ G + +AVK L + + EL I H
Sbjct: 69 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 128
Query: 499 NIVELIGYCNEHGQHLLV-YDYGGNCTLHDLLHSD-----------EEAHKKF-SWNIRI 545
N+V L+G C + G L+V ++ L L S E+ +K F + I
Sbjct: 129 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 188
Query: 546 RVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSE 605
+ A+ +++L +H + + NILL EK +V++ D GLA ++
Sbjct: 189 CYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 245
Query: 606 GLLTAHGSGAPE-FESGSYSCQSDVYSLGVVMLELLT-GRKPY-----DRSRPRGEQSLV 658
APE Y+ QSDV+S GV++ E+ + G PY D R +
Sbjct: 246 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT 305
Query: 659 RWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDL 716
R P + M+D C EP RP SE+V+ L
Sbjct: 306 RMRAPDYTTPEMYQTMLD---------------------CWHGEPSQRPTFSELVEHL 342
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 116/276 (42%), Gaps = 32/276 (11%)
Query: 442 FSEGNFIGEGLLGSVYKAELPGGK-LLAVKKLSNTVSQRQTDEEFLELASTI-SRLRHGN 499
F G +G+G G+VY A K +LA+K L ++ E L I S LRH N
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 500 IVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQ 559
I+ L GY ++ + L+ +Y T++ L + KF A AL Y
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCH 125
Query: 560 EVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE 619
++H + K N+LL ++++D G + S EL L PE
Sbjct: 126 ---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTELCGTL----DYLPPEMI 178
Query: 620 SGS-YSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPS 678
G + + D++SLGV+ E L G+ P+ E + + R+ ++ D
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGKPPF-------EANTYQETYKRISRVEFT--FPDFV 229
Query: 679 LDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQ 714
+GA D+ISR ++ P RP + E+++
Sbjct: 230 TEGA---------RDLISRLLKHNPSQRPMLREVLE 256
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 107/225 (47%), Gaps = 19/225 (8%)
Query: 430 FTIASLQQYTNSFSEGNFIGEGLLGSVY--KAELPGGKLLAVKKLSNTVSQRQTDEE-FL 486
F S +++ + +G+G G V K ++ G + AVK +S +++TD+E L
Sbjct: 16 FVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQEC-AVKVISKRQVKQKTDKESLL 74
Query: 487 ELASTISRLRHGNIVELIGYCNEHGQHLLVYD-YGGNCTLHDLLHSDEEAHKKFSWNIRI 545
+ +L H NI +L + + G LV + Y G +++ + K+FS
Sbjct: 75 REVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEII-----SRKRFSEVDAA 129
Query: 546 RVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEK---LIVRVSDCGLAPLLFSGSTNE 602
R+ + Y + IVH + K N+LL+ K +R+ D GL+ ++ +
Sbjct: 130 RIIRQVLSGITYXHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF--EASKK 184
Query: 603 LSEGLLTAHGSGAPEFESGSYSCQSDVYSLGVVMLELLTGRKPYD 647
+ + TA+ APE G+Y + DV+S GV++ LL+G P++
Sbjct: 185 XKDKIGTAYYI-APEVLHGTYDEKCDVWSTGVILYILLSGCPPFN 228
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 114/298 (38%), Gaps = 50/298 (16%)
Query: 445 GNFIGEGLLGSVYKAELPG------GKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHG 498
G +G G G V +A+ G + +AVK L + + EL I H
Sbjct: 32 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 91
Query: 499 NIVELIGYCNEHGQHLLV-YDYGGNCTLHDLLHSD-----------EEAHKKF-SWNIRI 545
N+V L+G C + G L+V ++ L L S E+ +K F + I
Sbjct: 92 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 151
Query: 546 RVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSE 605
+ A+ +++L +H + + NILL EK +V++ D GLA ++
Sbjct: 152 CYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKG 208
Query: 606 GLLTAHGSGAPE-FESGSYSCQSDVYSLGVVMLELLT-GRKPY-----DRSRPRGEQSLV 658
APE Y+ QSDV+S GV++ E+ + G PY D R +
Sbjct: 209 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT 268
Query: 659 RWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDL 716
R P + M+D C EP RP SE+V+ L
Sbjct: 269 RMRAPDYTTPEMYQTMLD---------------------CWHGEPSQRPTFSELVEHL 305
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 114/298 (38%), Gaps = 50/298 (16%)
Query: 445 GNFIGEGLLGSVYKAELPG------GKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHG 498
G +G G G V +A+ G + +AVK L + + EL I H
Sbjct: 34 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 93
Query: 499 NIVELIGYCNEHGQHLLV-YDYGGNCTLHDLLHSD-----------EEAHKKF-SWNIRI 545
N+V L+G C + G L+V ++ L L S E+ +K F + I
Sbjct: 94 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLI 153
Query: 546 RVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSE 605
+ A+ +++L +H + + NILL EK +V++ D GLA ++
Sbjct: 154 CYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 210
Query: 606 GLLTAHGSGAPE-FESGSYSCQSDVYSLGVVMLELLT-GRKPY-----DRSRPRGEQSLV 658
APE Y+ QSDV+S GV++ E+ + G PY D R +
Sbjct: 211 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT 270
Query: 659 RWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDL 716
R P + M+D C EP RP SE+V+ L
Sbjct: 271 RMRAPDYTTPEMYQTMLD---------------------CWHGEPSQRPTFSELVEHL 307
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 114/298 (38%), Gaps = 50/298 (16%)
Query: 445 GNFIGEGLLGSVYKAELPG------GKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHG 498
G +G G G V +A+ G + +AVK L + + EL I H
Sbjct: 23 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 82
Query: 499 NIVELIGYCNEHGQHLLVY-DYGGNCTLHDLLHSD-----------EEAHKKF-SWNIRI 545
N+V L+G C + G L+V ++ L L S E+ +K F + I
Sbjct: 83 NVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 142
Query: 546 RVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSE 605
+ A+ +++L +H + + NILL EK +V++ D GLA ++
Sbjct: 143 CYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 199
Query: 606 GLLTAHGSGAPE-FESGSYSCQSDVYSLGVVMLELLT-GRKPY-----DRSRPRGEQSLV 658
APE Y+ QSDV+S GV++ E+ + G PY D R +
Sbjct: 200 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT 259
Query: 659 RWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDL 716
R P + M+D C EP RP SE+V+ L
Sbjct: 260 RMRAPDYTTPEMYQTMLD---------------------CWHGEPSQRPTFSELVEHL 296
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 96/234 (41%), Gaps = 40/234 (17%)
Query: 445 GNFIGEGLLGSVYKAELPG------GKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHG 498
G +G G G V A G +AVK L + + EL H
Sbjct: 50 GKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHE 109
Query: 499 NIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFS------------------ 540
NIV L+G C G L+++Y C DLL+ +KFS
Sbjct: 110 NIVNLLGACTLSGPIYLIFEY---CCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDL 166
Query: 541 ----WNIRIRVALGAARALQYLQ-EVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLL 595
+ + A A+ +++L+ + C VH + + N+L+ +V++ D GLA +
Sbjct: 167 NVLTFEDLLCFAYQVAKGMEFLEFKSC----VHRDLAARNVLVTHGKVVKICDFGLARDI 222
Query: 596 FSGSTNELSEGLLTAHGSGAPE--FESGSYSCQSDVYSLGVVMLELLT-GRKPY 646
S S + APE FE G Y+ +SDV+S G+++ E+ + G PY
Sbjct: 223 MSDSNYVVRGNARLPVKWMAPESLFE-GIYTIKSDVWSYGILLWEIFSLGVNPY 275
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 94/212 (44%), Gaps = 13/212 (6%)
Query: 435 LQQYTNSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISR 494
Q + + +GEG G VYKA+ G+++A+K++ + S +
Sbjct: 16 FQGLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKE 75
Query: 495 LRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVAL-GAAR 553
L H NIV LI + LV+++ L +L ++ + I + L G A
Sbjct: 76 LHHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAH 134
Query: 554 ALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGS 613
Q+ I+H + K N+L++ ++++D GLA F + ++T
Sbjct: 135 CHQHR-------ILHRDLKPQNLLINSDGALKLADFGLA-RAFGIPVRSYTHEVVTL-WY 185
Query: 614 GAPEFESGS--YSCQSDVYSLGVVMLELLTGR 643
AP+ GS YS D++S+G + E++TG+
Sbjct: 186 RAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 100/215 (46%), Gaps = 27/215 (12%)
Query: 446 NFIGEGLLGSVYKA-ELPGGK----LLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNI 500
+G G G+VYK +P G+ +A+K L S + ++E L+ A ++ + +
Sbjct: 23 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPK-ANKEILDEAYVMAGVGSPYV 81
Query: 501 VELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQE 560
L+G C L+ C L H E + S ++ + + A+ + YL++
Sbjct: 82 SRLLGICLTSTVQLVTQLMPYGCLLD---HVRENRGRLGSQDL-LNWCMQIAKGMSYLED 137
Query: 561 VCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAP---- 616
V +VH + + N+L+ V+++D GLA LL ++ E A G P
Sbjct: 138 V---RLVHRDLAARNVLVKSPNHVKITDFGLARLL------DIDETEYHADGGKVPIKWM 188
Query: 617 EFES---GSYSCQSDVYSLGVVMLELLT-GRKPYD 647
ES ++ QSDV+S GV + EL+T G KPYD
Sbjct: 189 ALESILRRRFTHQSDVWSYGVTVWELMTFGAKPYD 223
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 114/298 (38%), Gaps = 50/298 (16%)
Query: 445 GNFIGEGLLGSVYKAELPG------GKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHG 498
G +G G G V +A+ G + +AVK L + + EL I H
Sbjct: 32 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 91
Query: 499 NIVELIGYCNEHGQHLLV-YDYGGNCTLHDLLHSD-----------EEAHKKF-SWNIRI 545
N+V L+G C + G L+V ++ L L S E+ +K F + I
Sbjct: 92 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 151
Query: 546 RVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSE 605
+ A+ +++L +H + + NILL EK +V++ D GLA ++
Sbjct: 152 CYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 208
Query: 606 GLLTAHGSGAPE-FESGSYSCQSDVYSLGVVMLELLT-GRKPY-----DRSRPRGEQSLV 658
APE Y+ QSDV+S GV++ E+ + G PY D R +
Sbjct: 209 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT 268
Query: 659 RWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDL 716
R P + M+D C EP RP SE+V+ L
Sbjct: 269 RMRAPDYTTPEMYQTMLD---------------------CWHGEPSQRPTFSELVEHL 305
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 114/298 (38%), Gaps = 50/298 (16%)
Query: 445 GNFIGEGLLGSVYKAELPG------GKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHG 498
G +G G G V +A+ G + +AVK L + + EL I H
Sbjct: 23 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 82
Query: 499 NIVELIGYCNEHGQHLLVY-DYGGNCTLHDLLHSD-----------EEAHKKF-SWNIRI 545
N+V L+G C + G L+V ++ L L S E+ +K F + I
Sbjct: 83 NVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 142
Query: 546 RVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSE 605
+ A+ +++L +H + + NILL EK +V++ D GLA ++
Sbjct: 143 CYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 199
Query: 606 GLLTAHGSGAPE-FESGSYSCQSDVYSLGVVMLELLT-GRKPY-----DRSRPRGEQSLV 658
APE Y+ QSDV+S GV++ E+ + G PY D R +
Sbjct: 200 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT 259
Query: 659 RWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDL 716
R P + M+D C EP RP SE+V+ L
Sbjct: 260 RMRAPDYTTPEMYQTMLD---------------------CWHGEPSQRPTFSELVEHL 296
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 17/210 (8%)
Query: 440 NSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHG 498
+F + IGEG G VYKA G+++A+KK+ + S + L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 499 NIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYL 558
NIV+L+ + + LV+++ +H D + S I + L + Q L
Sbjct: 62 NIVKLLDVIHTENKLYLVFEH---------VHQDLKTFMDASALTGIPLPLIKSYLFQLL 112
Query: 559 Q--EVCEPP-IVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGA 615
Q C ++H + K N+L++ + ++++D GLA F + ++T A
Sbjct: 113 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYTHEVVTL-WYRA 170
Query: 616 PEFESGS--YSCQSDVYSLGVVMLELLTGR 643
PE G YS D++SLG + E++T R
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 89/183 (48%), Gaps = 15/183 (8%)
Query: 468 AVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYD-YGGNCTLH 526
A+K + T ++ + LE + + L H NI++L + + + LV + Y G
Sbjct: 66 AIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFD 125
Query: 527 DLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEK---LI 583
+++H + +N + A+ + L + + + IVH + K N+LL+ K +
Sbjct: 126 EIIH-------RMKFN-EVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDAL 177
Query: 584 VRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFESGSYSCQSDVYSLGVVMLELLTGR 643
+++ D GL+ + + ++ E L TA+ APE Y + DV+S+GV++ LL G
Sbjct: 178 IKIVDFGLSAVF--ENQKKMKERLGTAYYI-APEVLRKKYDEKCDVWSIGVILFILLAGY 234
Query: 644 KPY 646
P+
Sbjct: 235 PPF 237
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 103/235 (43%), Gaps = 14/235 (5%)
Query: 442 FSEGNFIGEGLLGSVYKAE-LPGGKLLAVKKLSNTVSQRQTDEEFLELASTIS-RLRHGN 499
F GN +G+G VY+AE + G +A+K + + + ++ I +L+H +
Sbjct: 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPS 72
Query: 500 IVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQ 559
I+EL Y + LV + N ++ L + K FS N + YL
Sbjct: 73 ILELYNYFEDSNYVYLVLEMCHNGEMNRYL---KNRVKPFSENEARHFMHQIITGMLYLH 129
Query: 560 EVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE 619
I+H + SN+LL + ++++D GLA L +E L +PE
Sbjct: 130 S---HGILHRDLTLSNLLLTRNMNIKIADFGLATQL--KMPHEKHYTLCGTPNYISPEIA 184
Query: 620 SGS-YSCQSDVYSLGVVMLELLTGRKPYDRSRPR---GEQSLVRWAIPRLHDIDA 670
+ S + +SDV+SLG + LL GR P+D + + L + +P I+A
Sbjct: 185 TRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPSFLSIEA 239
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 96/213 (45%), Gaps = 23/213 (10%)
Query: 441 SFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGN 499
S+++ IG G G VY+A+L G+L+A+KK+ +R + E + +L H N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ--DKRFKNREL----QIMRKLDHCN 74
Query: 500 IVELIGYCNEHGQHL------LVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAAR 553
IV L + G+ LV DY T++ + A + I V L +
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPV---IYVKLYMYQ 130
Query: 554 ALQYLQEVCEPPIVHGNFKSSNILLD-EKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHG 612
+ L + I H + K N+LLD + ++++ D G A L G N + +
Sbjct: 131 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SYICSRY 187
Query: 613 SGAPE--FESGSYSCQSDVYSLGVVMLELLTGR 643
APE F + Y+ DV+S G V+ ELL G+
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 96/213 (45%), Gaps = 23/213 (10%)
Query: 441 SFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGN 499
S+++ IG G G VY+A+L G+L+A+KK+ +R + E + +L H N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ--DKRFKNREL----QIMRKLDHCN 74
Query: 500 IVELIGYCNEHGQHL------LVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAAR 553
IV L + G+ LV DY T++ + A + I V L +
Sbjct: 75 IVRLRYFFYSSGEKKDVVYLNLVLDYVPE-TVYRVARHYSRAKQTLPV---IYVKLYMYQ 130
Query: 554 ALQYLQEVCEPPIVHGNFKSSNILLD-EKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHG 612
+ L + I H + K N+LLD + ++++ D G A L G N + +
Sbjct: 131 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SXICSRY 187
Query: 613 SGAPE--FESGSYSCQSDVYSLGVVMLELLTGR 643
APE F + Y+ DV+S G V+ ELL G+
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 93/210 (44%), Gaps = 17/210 (8%)
Query: 440 NSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHG 498
+F + IGEG G VYKA G+++A+KK+ + S + L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 499 NIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYL 558
NIV+L+ + + LV+++ LH D + S I + L + Q L
Sbjct: 63 NIVKLLDVIHTENKLYLVFEF---------LHQDLKDFMDASALTGIPLPLIKSYLFQLL 113
Query: 559 Q--EVCEP-PIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGA 615
Q C ++H + K N+L++ + ++++D GLA F ++T A
Sbjct: 114 QGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVVTL-WYRA 171
Query: 616 PEFESGS--YSCQSDVYSLGVVMLELLTGR 643
PE G YS D++SLG + E++T R
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 96/213 (45%), Gaps = 23/213 (10%)
Query: 441 SFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGN 499
S+++ IG G G VY+A+L G+L+A+KK+ +R + E + +L H N
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ--DKRFKNREL----QIMRKLDHCN 87
Query: 500 IVELIGYCNEHGQHL------LVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAAR 553
IV L + G+ LV DY T++ + A + I V L +
Sbjct: 88 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPV---IYVKLYMYQ 143
Query: 554 ALQYLQEVCEPPIVHGNFKSSNILLD-EKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHG 612
+ L + I H + K N+LLD + ++++ D G A L G N + +
Sbjct: 144 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SYICSRY 200
Query: 613 SGAPE--FESGSYSCQSDVYSLGVVMLELLTGR 643
APE F + Y+ DV+S G V+ ELL G+
Sbjct: 201 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 95/214 (44%), Gaps = 25/214 (11%)
Query: 441 SFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISR-LRHG 498
S+++ IG G G VY+A+L G+L+A+KK+ D+ F I R L H
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-------DKRFKNRELQIMRKLDHC 101
Query: 499 NIVELIGYCNEHGQHL------LVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAA 552
NIV L + G+ LV DY T++ + A + I V L
Sbjct: 102 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPV---IYVKLYMY 157
Query: 553 RALQYLQEVCEPPIVHGNFKSSNILLD-EKLIVRVSDCGLAPLLFSGSTNELSEGLLTAH 611
+ + L + I H + K N+LLD + ++++ D G A L G N + +
Sbjct: 158 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SYICSR 214
Query: 612 GSGAPE--FESGSYSCQSDVYSLGVVMLELLTGR 643
APE F + Y+ DV+S G V+ ELL G+
Sbjct: 215 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 103/221 (46%), Gaps = 15/221 (6%)
Query: 439 TNSFSEGNFIGEGLLGSVYKA-ELPGGKLLAVKKLSNTVSQRQTDE-EFLELASTISRLR 496
++ + G +G G + V+ A +L + +AVK L +++ + F A + L
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 497 HGNIVEL--IGYCNEHGQHL--LVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAA 552
H IV + G L +V +Y TL D++H++ K + I V A
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRA----IEVIADAC 126
Query: 553 RALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLF-SGSTNELSEGLLTAH 611
+AL + + I+H + K +NIL+ V+V D G+A + SG++ + ++
Sbjct: 127 QALNFSHQNG---IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTA 183
Query: 612 GSGAPEFESG-SYSCQSDVYSLGVVMLELLTGRKPYDRSRP 651
+PE G S +SDVYSLG V+ E+LTG P+ P
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP 224
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 96/213 (45%), Gaps = 23/213 (10%)
Query: 441 SFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGN 499
S+++ IG G G VY+A+L G+L+A+KK+ +R + E + +L H N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ--DKRFKNREL----QIMRKLDHCN 74
Query: 500 IVELIGYCNEHGQHL------LVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAAR 553
IV L + G+ LV DY T++ + A + I V L +
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPV---IYVKLYMYQ 130
Query: 554 ALQYLQEVCEPPIVHGNFKSSNILLD-EKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHG 612
+ L + I H + K N+LLD + ++++ D G A L G N + +
Sbjct: 131 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SXICSRY 187
Query: 613 SGAPE--FESGSYSCQSDVYSLGVVMLELLTGR 643
APE F + Y+ DV+S G V+ ELL G+
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 96/213 (45%), Gaps = 23/213 (10%)
Query: 441 SFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGN 499
S+++ IG G G VY+A+L G+L+A+KK+ +R + E + +L H N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ--DKRFKNREL----QIMRKLDHCN 74
Query: 500 IVELIGYCNEHGQHL------LVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAAR 553
IV L + G+ LV DY T++ + A + I V L +
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPV---IYVKLYMYQ 130
Query: 554 ALQYLQEVCEPPIVHGNFKSSNILLD-EKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHG 612
+ L + I H + K N+LLD + ++++ D G A L G N + +
Sbjct: 131 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SXICSRY 187
Query: 613 SGAPE--FESGSYSCQSDVYSLGVVMLELLTGR 643
APE F + Y+ DV+S G V+ ELL G+
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 117/283 (41%), Gaps = 41/283 (14%)
Query: 448 IGEGLLGSVYKA---ELPGGKL---LAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIV 501
+G+G G VY+ ++ G+ +AVK ++ + S R+ E FL AS + ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE-FLNEASVMKGFTCHHVV 83
Query: 502 ELIGYCNEHGQHLLVYDYGGNCTLHDLLHS------DEEAHKKFSWNIRIRVALGAARAL 555
L+G ++ L+V + + L L S + + I++A A +
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 556 QYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLF-SGSTNELSEGLLTAHGSG 614
YL VH + + N ++ V++ D G+ ++ + + +GLL
Sbjct: 144 AYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWMA 200
Query: 615 APEFESGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSR 673
+ G ++ SD++S GVV+ E+ + +PY Q L + +
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITSLAEQPY--------QGLSNEQVLKF-------- 244
Query: 674 MVDPSLDGAYLAK---SLSRFADIISRCVQWEPGFRPPMSEIV 713
+DG YL + R D++ C Q+ P RP EIV
Sbjct: 245 ----VMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIV 283
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 96/213 (45%), Gaps = 23/213 (10%)
Query: 441 SFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGN 499
S+++ IG G G VY+A+L G+L+A+KK+ +R + E + +L H N
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ--DKRFKNREL----QIMRKLDHCN 93
Query: 500 IVELIGYCNEHGQHL------LVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAAR 553
IV L + G+ LV DY T++ + A + I V L +
Sbjct: 94 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPV---IYVKLYMYQ 149
Query: 554 ALQYLQEVCEPPIVHGNFKSSNILLD-EKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHG 612
+ L + I H + K N+LLD + ++++ D G A L G N + +
Sbjct: 150 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SXICSRY 206
Query: 613 SGAPE--FESGSYSCQSDVYSLGVVMLELLTGR 643
APE F + Y+ DV+S G V+ ELL G+
Sbjct: 207 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 95/214 (44%), Gaps = 25/214 (11%)
Query: 441 SFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISR-LRHG 498
S+++ IG G G VY+A+L G+L+A+KK+ D+ F I R L H
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-------DKRFKNRELQIMRKLDHC 107
Query: 499 NIVELIGYCNEHGQHL------LVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAA 552
NIV L + G+ LV DY T++ + A + I V L
Sbjct: 108 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPV---IYVKLYMY 163
Query: 553 RALQYLQEVCEPPIVHGNFKSSNILLD-EKLIVRVSDCGLAPLLFSGSTNELSEGLLTAH 611
+ + L + I H + K N+LLD + ++++ D G A L G N + +
Sbjct: 164 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SYICSR 220
Query: 612 GSGAPE--FESGSYSCQSDVYSLGVVMLELLTGR 643
APE F + Y+ DV+S G V+ ELL G+
Sbjct: 221 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 96/213 (45%), Gaps = 23/213 (10%)
Query: 441 SFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGN 499
S+++ IG G G VY+A+L G+L+A+KK+ +R + E + +L H N
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ--DKRFKNREL----QIMRKLDHCN 79
Query: 500 IVELIGYCNEHGQHL------LVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAAR 553
IV L + G+ LV DY T++ + A + I V L +
Sbjct: 80 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPV---IYVKLYMYQ 135
Query: 554 ALQYLQEVCEPPIVHGNFKSSNILLD-EKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHG 612
+ L + I H + K N+LLD + ++++ D G A L G N + +
Sbjct: 136 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SYICSRY 192
Query: 613 SGAPE--FESGSYSCQSDVYSLGVVMLELLTGR 643
APE F + Y+ DV+S G V+ ELL G+
Sbjct: 193 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 95/214 (44%), Gaps = 25/214 (11%)
Query: 441 SFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISR-LRHG 498
S+++ IG G G VY+A+L G+L+A+KK+ D+ F I R L H
Sbjct: 57 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-------DKRFKNRELQIMRKLDHC 109
Query: 499 NIVELIGYCNEHGQHL------LVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAA 552
NIV L + G+ LV DY T++ + A + I V L
Sbjct: 110 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPV---IYVKLYMY 165
Query: 553 RALQYLQEVCEPPIVHGNFKSSNILLD-EKLIVRVSDCGLAPLLFSGSTNELSEGLLTAH 611
+ + L + I H + K N+LLD + ++++ D G A L G N + +
Sbjct: 166 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SYICSR 222
Query: 612 GSGAPE--FESGSYSCQSDVYSLGVVMLELLTGR 643
APE F + Y+ DV+S G V+ ELL G+
Sbjct: 223 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 98/213 (46%), Gaps = 25/213 (11%)
Query: 441 SFSEGNFIGEGLLGSVYKAELPGG-KLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGN 499
+ EG+F G+ L + YK + K ++ + L + + + E S + LRH +
Sbjct: 16 TLGEGSF-GKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREI----SYLKLLRHPH 70
Query: 500 IVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSD---EEAHKKFSWNIRIRVALGAARALQ 556
I++L ++V +Y G ++ E+ ++F I A++
Sbjct: 71 IIKLYDVITTPTDIVMVIEYAGGELFDYIVEKKRMTEDEGRRFFQQI--------ICAIE 122
Query: 557 YLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAP 616
Y IVH + K N+LLD+ L V+++D GL+ ++ G+ + S G + AP
Sbjct: 123 YCHR---HKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCG---SPNYAAP 176
Query: 617 EFESGSYSC--QSDVYSLGVVMLELLTGRKPYD 647
E +G + DV+S G+V+ +L GR P+D
Sbjct: 177 EVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFD 209
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 96/213 (45%), Gaps = 23/213 (10%)
Query: 441 SFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGN 499
S+++ IG G G VY+A+L G+L+A+KK+ +R + E + +L H N
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ--DKRFKNREL----QIMRKLDHCN 82
Query: 500 IVELIGYCNEHGQHL------LVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAAR 553
IV L + G+ LV DY T++ + A + I V L +
Sbjct: 83 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPV---IYVKLYMYQ 138
Query: 554 ALQYLQEVCEPPIVHGNFKSSNILLD-EKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHG 612
+ L + I H + K N+LLD + ++++ D G A L G N + +
Sbjct: 139 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SXICSRY 195
Query: 613 SGAPE--FESGSYSCQSDVYSLGVVMLELLTGR 643
APE F + Y+ DV+S G V+ ELL G+
Sbjct: 196 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 96/213 (45%), Gaps = 23/213 (10%)
Query: 441 SFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGN 499
S+++ IG G G VY+A+L G+L+A+KK+ +R + E + +L H N
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ--DKRFKNREL----QIMRKLDHCN 75
Query: 500 IVELIGYCNEHGQHL------LVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAAR 553
IV L + G+ LV DY T++ + A + I V L +
Sbjct: 76 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPV---IYVKLYMYQ 131
Query: 554 ALQYLQEVCEPPIVHGNFKSSNILLD-EKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHG 612
+ L + I H + K N+LLD + ++++ D G A L G N + +
Sbjct: 132 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SXICSRY 188
Query: 613 SGAPE--FESGSYSCQSDVYSLGVVMLELLTGR 643
APE F + Y+ DV+S G V+ ELL G+
Sbjct: 189 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 95/214 (44%), Gaps = 25/214 (11%)
Query: 441 SFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISR-LRHG 498
S+++ IG G G VY+A+L G+L+A+KK+ D+ F I R L H
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-------DKRFKNRELQIMRKLDHC 107
Query: 499 NIVELIGYCNEHGQHL------LVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAA 552
NIV L + G+ LV DY T++ + A + I V L
Sbjct: 108 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPV---IYVKLYMY 163
Query: 553 RALQYLQEVCEPPIVHGNFKSSNILLD-EKLIVRVSDCGLAPLLFSGSTNELSEGLLTAH 611
+ + L + I H + K N+LLD + ++++ D G A L G N + +
Sbjct: 164 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SXICSR 220
Query: 612 GSGAPE--FESGSYSCQSDVYSLGVVMLELLTGR 643
APE F + Y+ DV+S G V+ ELL G+
Sbjct: 221 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 96/213 (45%), Gaps = 23/213 (10%)
Query: 441 SFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGN 499
S+++ IG G G VY+A+L G+L+A+KK+ +R + E + +L H N
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ--DKRFKNREL----QIMRKLDHCN 86
Query: 500 IVELIGYCNEHGQHL------LVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAAR 553
IV L + G+ LV DY T++ + A + I V L +
Sbjct: 87 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPV---IYVKLYMYQ 142
Query: 554 ALQYLQEVCEPPIVHGNFKSSNILLD-EKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHG 612
+ L + I H + K N+LLD + ++++ D G A L G N + +
Sbjct: 143 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SXICSRY 199
Query: 613 SGAPE--FESGSYSCQSDVYSLGVVMLELLTGR 643
APE F + Y+ DV+S G V+ ELL G+
Sbjct: 200 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 96/213 (45%), Gaps = 23/213 (10%)
Query: 441 SFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGN 499
S+++ IG G G VY+A+L G+L+A+KK+ +R + E + +L H N
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ--DKRFKNREL----QIMRKLDHCN 86
Query: 500 IVELIGYCNEHGQHL------LVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAAR 553
IV L + G+ LV DY T++ + A + I V L +
Sbjct: 87 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPV---IYVKLYMYQ 142
Query: 554 ALQYLQEVCEPPIVHGNFKSSNILLD-EKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHG 612
+ L + I H + K N+LLD + ++++ D G A L G N + +
Sbjct: 143 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SXICSRY 199
Query: 613 SGAPE--FESGSYSCQSDVYSLGVVMLELLTGR 643
APE F + Y+ DV+S G V+ ELL G+
Sbjct: 200 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 96/213 (45%), Gaps = 23/213 (10%)
Query: 441 SFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGN 499
S+++ IG G G VY+A+L G+L+A+KK+ +R + E + +L H N
Sbjct: 25 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ--DKRFKNREL----QIMRKLDHCN 78
Query: 500 IVELIGYCNEHGQHL------LVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAAR 553
IV L + G+ LV DY T++ + A + I V L +
Sbjct: 79 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPV---IYVKLYMYQ 134
Query: 554 ALQYLQEVCEPPIVHGNFKSSNILLD-EKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHG 612
+ L + I H + K N+LLD + ++++ D G A L G N + +
Sbjct: 135 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SXICSRY 191
Query: 613 SGAPE--FESGSYSCQSDVYSLGVVMLELLTGR 643
APE F + Y+ DV+S G V+ ELL G+
Sbjct: 192 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 90/208 (43%), Gaps = 23/208 (11%)
Query: 448 IGEGLLGSVYKAE-LPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGY 506
IG+G V A + G+ +A+K + T + ++ + L H NIV+L
Sbjct: 23 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 507 CNEHGQHLLVYDYGGNCTLHDLL-----HSDEEAHKKFSWNIRIRVALGAARALQYLQEV 561
L+ +Y + D L ++EA KF + A+QY +
Sbjct: 83 IETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVS---------AVQYCHQ- 132
Query: 562 CEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPE-FES 620
IVH + K+ N+LLD + ++++D G + G + A APE F+
Sbjct: 133 --KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGK---LDAFCGAPPYAAPELFQG 187
Query: 621 GSYSC-QSDVYSLGVVMLELLTGRKPYD 647
Y + DV+SLGV++ L++G P+D
Sbjct: 188 KKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 95/214 (44%), Gaps = 25/214 (11%)
Query: 441 SFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISR-LRHG 498
S+++ IG G G VY+A+L G+L+A+KK+ D+ F I R L H
Sbjct: 100 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-------DKRFKNRELQIMRKLDHC 152
Query: 499 NIVELIGYCNEHGQHL------LVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAA 552
NIV L + G+ LV DY T++ + A + I V L
Sbjct: 153 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPV---IYVKLYMY 208
Query: 553 RALQYLQEVCEPPIVHGNFKSSNILLD-EKLIVRVSDCGLAPLLFSGSTNELSEGLLTAH 611
+ + L + I H + K N+LLD + ++++ D G A L G N + +
Sbjct: 209 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SYICSR 265
Query: 612 GSGAPE--FESGSYSCQSDVYSLGVVMLELLTGR 643
APE F + Y+ DV+S G V+ ELL G+
Sbjct: 266 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 117/276 (42%), Gaps = 32/276 (11%)
Query: 442 FSEGNFIGEGLLGSVYKAELPGGK-LLAVKKLSNTVSQRQTDEEFLELASTI-SRLRHGN 499
F G +G+G G+VY A K +LA+K L ++ E L I S LRH N
Sbjct: 36 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 95
Query: 500 IVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQ 559
I+ L GY ++ + L+ +Y T++ L + KF A AL Y
Sbjct: 96 ILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCH 151
Query: 560 EVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE 619
++H + K N+LL ++++D G + S ++L L PE
Sbjct: 152 ---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTL----DYLPPEMI 204
Query: 620 SGS-YSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPS 678
G + + D++SLGV+ E L G+ P+ E + + R+ ++ D
Sbjct: 205 EGRMHDEKVDLWSLGVLCYEFLVGKPPF-------EANTYQETYKRISRVEFT--FPDFV 255
Query: 679 LDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQ 714
+GA D+ISR ++ P RP + E+++
Sbjct: 256 TEGA---------RDLISRLLKHNPSQRPMLREVLE 282
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 95/214 (44%), Gaps = 25/214 (11%)
Query: 441 SFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISR-LRHG 498
S+++ IG G G VY+A+L G+L+A+KK+ D+ F I R L H
Sbjct: 59 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-------DKRFKNRELQIMRKLDHC 111
Query: 499 NIVELIGYCNEHGQHL------LVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAA 552
NIV L + G+ LV DY T++ + A + I V L
Sbjct: 112 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPV---IYVKLYMY 167
Query: 553 RALQYLQEVCEPPIVHGNFKSSNILLD-EKLIVRVSDCGLAPLLFSGSTNELSEGLLTAH 611
+ + L + I H + K N+LLD + ++++ D G A L G N + +
Sbjct: 168 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SYICSR 224
Query: 612 GSGAPE--FESGSYSCQSDVYSLGVVMLELLTGR 643
APE F + Y+ DV+S G V+ ELL G+
Sbjct: 225 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 116/276 (42%), Gaps = 32/276 (11%)
Query: 442 FSEGNFIGEGLLGSVYKAELPGGK-LLAVKKLSNTVSQRQTDEEFLELASTI-SRLRHGN 499
F G +G+G G+VY A K +LA+K L ++ E L I S LRH N
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 70
Query: 500 IVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQ 559
I+ L GY ++ + L+ +Y T++ L + KF A AL Y
Sbjct: 71 ILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCH 126
Query: 560 EVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE 619
++H + K N+LL ++++D G + S LS L PE
Sbjct: 127 ---SKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLSGTL----DYLPPEMI 179
Query: 620 SGS-YSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPS 678
G + + D++SLGV+ E L G+ P+ E + + R+ ++ D
Sbjct: 180 EGRMHDEKVDLWSLGVLCYEFLVGKPPF-------EANTYQETYKRISRVEFT--FPDFV 230
Query: 679 LDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQ 714
+GA D+ISR ++ P RP + E+++
Sbjct: 231 TEGA---------RDLISRLLKHNPSQRPMLREVLE 257
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 93/210 (44%), Gaps = 17/210 (8%)
Query: 440 NSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHG 498
+F + IGEG G VYKA G+++A+ K+ + S + L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 499 NIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYL 558
NIV+L+ + + LV+++ LH D + S I + L + Q L
Sbjct: 63 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 559 Q--EVCEP-PIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGA 615
Q C ++H + K N+L++ + ++++D GLA F + ++T A
Sbjct: 114 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYTHEVVTL-WYRA 171
Query: 616 PEFESGS--YSCQSDVYSLGVVMLELLTGR 643
PE G YS D++SLG + E++T R
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 93/210 (44%), Gaps = 17/210 (8%)
Query: 440 NSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHG 498
+F + IGEG G VYKA G+++A+ K+ + S + L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 499 NIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYL 558
NIV+L+ + + LV+++ LH D + S I + L + Q L
Sbjct: 62 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 112
Query: 559 Q--EVCEP-PIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGA 615
Q C ++H + K N+L++ + ++++D GLA F + ++T A
Sbjct: 113 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYTHEVVTL-WYRA 170
Query: 616 PEFESGS--YSCQSDVYSLGVVMLELLTGR 643
PE G YS D++SLG + E++T R
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 112/250 (44%), Gaps = 35/250 (14%)
Query: 435 LQQYTNSFSEGNFIGEGLLGSVYKA-ELPGGKLLAVKKLS---NTVSQRQTDEEFLELAS 490
++ + + +F+GEG +VYKA + +++A+KK+ + ++ + L
Sbjct: 5 VKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIK 64
Query: 491 TISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALG 550
+ L H NI+ L+ LV+D+ + +D E K + + +
Sbjct: 65 LLQELSHPNIIGLLDAFGHKSNISLVFDF---------METDLEVIIKDNSLVLTPSHIK 115
Query: 551 A--ARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLL 608
A LQ L+ + + I+H + K +N+LLDE +++++D GLA GS N +
Sbjct: 116 AYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSF--GSPNRAYXHQV 173
Query: 609 TAHGSGAPEFESGS--YSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLH 666
APE G+ Y D++++G ++ ELL R P+ +P
Sbjct: 174 VTRWYRAPELLFGARMYGVGVDMWAVGCILAELLL-RVPF---------------LPGDS 217
Query: 667 DIDALSRMVD 676
D+D L+R+ +
Sbjct: 218 DLDQLTRIFE 227
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 103/221 (46%), Gaps = 15/221 (6%)
Query: 439 TNSFSEGNFIGEGLLGSVYKA-ELPGGKLLAVKKLSNTVSQRQTDE-EFLELASTISRLR 496
++ + G +G G + V+ A +L + +AVK L +++ + F A + L
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 497 HGNIVEL--IGYCNEHGQHL--LVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAA 552
H IV + G L +V +Y TL D++H++ K + I V A
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRA----IEVIADAC 126
Query: 553 RALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLF-SGSTNELSEGLLTAH 611
+AL + + I+H + K +NI++ V+V D G+A + SG++ + ++
Sbjct: 127 QALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTA 183
Query: 612 GSGAPEFESG-SYSCQSDVYSLGVVMLELLTGRKPYDRSRP 651
+PE G S +SDVYSLG V+ E+LTG P+ P
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP 224
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 117/283 (41%), Gaps = 41/283 (14%)
Query: 448 IGEGLLGSVYKA---ELPGGKL---LAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIV 501
+G+G G VY+ ++ G+ +AVK ++ + S R+ E FL AS + ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE-FLNEASVMKGFTCHHVV 83
Query: 502 ELIGYCNEHGQHLLVYDYGGNCTLHDLLHS------DEEAHKKFSWNIRIRVALGAARAL 555
L+G ++ L+V + + L L S + + I++A A +
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 556 QYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLF-SGSTNELSEGLLTAHGSG 614
YL VH + + N ++ V++ D G+ ++ + + +GLL
Sbjct: 144 AYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 200
Query: 615 APEFESGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSR 673
+ G ++ SD++S GVV+ E+ + +PY Q L + +
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITSLAEQPY--------QGLSNEQVLKF-------- 244
Query: 674 MVDPSLDGAYLAK---SLSRFADIISRCVQWEPGFRPPMSEIV 713
+DG YL + R D++ C Q+ P RP EIV
Sbjct: 245 ----VMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIV 283
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 113/297 (38%), Gaps = 49/297 (16%)
Query: 445 GNFIGEGLLGSVYKAELPG------GKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHG 498
G +G G G V +A+ G + +AVK L + + EL I H
Sbjct: 33 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 92
Query: 499 NIVELIGYCNEHGQHLLV-YDYGGNCTLHDLLHSD----------EEAHKKF-SWNIRIR 546
N+V L+G C + G L+V ++ L L S E+ +K F + I
Sbjct: 93 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLIC 152
Query: 547 VALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEG 606
+ A+ +++L +H + + NILL EK +V++ D GLA +
Sbjct: 153 YSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 209
Query: 607 LLTAHGSGAPE-FESGSYSCQSDVYSLGVVMLELLT-GRKPY-----DRSRPRGEQSLVR 659
APE Y+ QSDV+S GV++ E+ + G PY D R + R
Sbjct: 210 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR 269
Query: 660 WAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDL 716
P + M+D C EP RP SE+V+ L
Sbjct: 270 MRAPDYTTPEMYQTMLD---------------------CWHGEPSQRPTFSELVEHL 305
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 103/221 (46%), Gaps = 15/221 (6%)
Query: 439 TNSFSEGNFIGEGLLGSVYKA-ELPGGKLLAVKKLSNTVSQRQTDE-EFLELASTISRLR 496
++ + G +G G + V+ A +L + +AVK L +++ + F A + L
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 497 HGNIVEL--IGYCNEHGQHL--LVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAA 552
H IV + G L +V +Y TL D++H++ K + I V A
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRA----IEVIADAC 126
Query: 553 RALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLF-SGSTNELSEGLLTAH 611
+AL + + I+H + K +NI++ V+V D G+A + SG++ + ++
Sbjct: 127 QALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTA 183
Query: 612 GSGAPEFESG-SYSCQSDVYSLGVVMLELLTGRKPYDRSRP 651
+PE G S +SDVYSLG V+ E+LTG P+ P
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP 224
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 116/283 (40%), Gaps = 41/283 (14%)
Query: 448 IGEGLLGSVYKA---ELPGGKL---LAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIV 501
+G+G G VY+ ++ G+ +AVK ++ + S R+ E FL AS + ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE-FLNEASVMKGFTCHHVV 83
Query: 502 ELIGYCNEHGQHLLVYDYGGNCTLHDLLHS------DEEAHKKFSWNIRIRVALGAARAL 555
L+G ++ L+V + + L L S + + I++A A +
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 556 QYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLA-PLLFSGSTNELSEGLLTAHGSG 614
YL VH + + N ++ V++ D G+ + + + +GLL
Sbjct: 144 AYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMA 200
Query: 615 APEFESGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSR 673
+ G ++ SD++S GVV+ E+ + +PY Q L + +
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITSLAEQPY--------QGLSNEQVLKF-------- 244
Query: 674 MVDPSLDGAYLAK---SLSRFADIISRCVQWEPGFRPPMSEIV 713
+DG YL + R D++ C Q+ P RP EIV
Sbjct: 245 ----VMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIV 283
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 116/276 (42%), Gaps = 32/276 (11%)
Query: 442 FSEGNFIGEGLLGSVYKAELPGGK-LLAVKKLSNTVSQRQTDEEFLELASTI-SRLRHGN 499
F G +G+G G+VY A K +LA+K L ++ E L I S LRH N
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 70
Query: 500 IVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQ 559
I+ L GY ++ + L+ +Y T++ L + KF A AL Y
Sbjct: 71 ILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCH 126
Query: 560 EVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE 619
++H + K N+LL ++++D G + S +L L PE
Sbjct: 127 ---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTL----DYLPPEMI 179
Query: 620 SGS-YSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPS 678
G + + D++SLGV+ E L G+ P+ E + + R+ ++ D
Sbjct: 180 EGRMHDEKVDLWSLGVLCYEFLVGKPPF-------EANTYQETYKRISRVEFT--FPDFV 230
Query: 679 LDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQ 714
+GA D+ISR ++ P RP + E+++
Sbjct: 231 TEGA---------RDLISRLLKHNPSQRPMLREVLE 257
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 96/213 (45%), Gaps = 23/213 (10%)
Query: 441 SFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGN 499
S+++ IG G G VY+A+L G+L+A+KK+ + + + + + +L H N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMR------KLDHCN 74
Query: 500 IVELIGYCNEHGQHL------LVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAAR 553
IV L + G+ LV DY T++ + A + I V L +
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPV---IYVKLYMYQ 130
Query: 554 ALQYLQEVCEPPIVHGNFKSSNILLD-EKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHG 612
+ L + I H + K N+LLD + ++++ D G A L G N + +
Sbjct: 131 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SYICSRY 187
Query: 613 SGAPE--FESGSYSCQSDVYSLGVVMLELLTGR 643
APE F + Y+ DV+S G V+ ELL G+
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 116/276 (42%), Gaps = 32/276 (11%)
Query: 442 FSEGNFIGEGLLGSVYKAELPGGK-LLAVKKLSNTVSQRQTDEEFLELASTI-SRLRHGN 499
F G +G+G G+VY A K +LA+K L ++ E L I S LRH N
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 500 IVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQ 559
I+ L GY ++ + L+ +Y T++ L + KF A AL Y
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCH 125
Query: 560 EVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE 619
++H + K N+LL ++++D G + S +L L PE
Sbjct: 126 ---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTL----DYLPPEMI 178
Query: 620 SGS-YSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPS 678
G + + D++SLGV+ E L G+ P+ E + + R+ ++ D
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGKPPF-------EANTYQETYKRISRVEFT--FPDFV 229
Query: 679 LDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQ 714
+GA D+ISR ++ P RP + E+++
Sbjct: 230 TEGA---------RDLISRLLKHNPSQRPMLREVLE 256
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 117/283 (41%), Gaps = 41/283 (14%)
Query: 448 IGEGLLGSVYKA---ELPGGKL---LAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIV 501
+G+G G VY+ ++ G+ +AVK ++ + S R+ E FL AS + ++V
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE-FLNEASVMKGFTCHHVV 82
Query: 502 ELIGYCNEHGQHLLVYDYGGNCTLHDLLHS------DEEAHKKFSWNIRIRVALGAARAL 555
L+G ++ L+V + + L L S + + I++A A +
Sbjct: 83 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 142
Query: 556 QYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLF-SGSTNELSEGLLTAHGSG 614
YL VH + + N ++ V++ D G+ ++ + + +GLL
Sbjct: 143 AYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 199
Query: 615 APEFESGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSR 673
+ G ++ SD++S GVV+ E+ + +PY Q L + +
Sbjct: 200 PESLKDGVFTTSSDMWSFGVVLWEITSLAEQPY--------QGLSNEQVLKF-------- 243
Query: 674 MVDPSLDGAYLAK---SLSRFADIISRCVQWEPGFRPPMSEIV 713
+DG YL + R D++ C Q+ P RP EIV
Sbjct: 244 ----VMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIV 282
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 111/291 (38%), Gaps = 37/291 (12%)
Query: 440 NSFSEGNFIGEGLLGSVYKAELPG-GK-----LLAVKKLSNTVSQRQTDEEFLELASTIS 493
N+ G +G G G V +A G GK +AVK L +T + + EL
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 494 RLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVA---LG 550
+H NIV L+G C G L++ +Y C DLL+ + + +A L
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEY---CCYGDLLNFLRRKSRVLETDPAFAIANSTLS 162
Query: 551 AARALQYLQEVCE-------PPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNEL 603
L + +V + +H + + N+LL + ++ D GLA + + S +
Sbjct: 163 TRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV 222
Query: 604 SEGLLTAHGSGAPE-FESGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWA 661
APE Y+ QSDV+S G+++ E+ + G PY
Sbjct: 223 KGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY--------------- 267
Query: 662 IPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEI 712
P + ++V A A + I+ C EP RP +I
Sbjct: 268 -PGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQI 317
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/291 (21%), Positives = 127/291 (43%), Gaps = 41/291 (14%)
Query: 432 IASLQQYTNSFSEGNFIGEGLLGSVYKA-ELPGGKLLAVKKLSNTVSQRQTDEEFLELAS 490
I S+ ++ IG+G G+VY A ++ G+ +A+++++ Q+Q +E + +
Sbjct: 13 IVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN---LQQQPKKELI--IN 67
Query: 491 TISRLRHGNIVELIGYCNEH--GQHL-LVYDYGGNCTLHDLLHS---DEEAHKKFSWNIR 544
I +R ++ Y + + G L +V +Y +L D++ DE
Sbjct: 68 EILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEG---------- 117
Query: 545 IRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELS 604
++A LQ L+ + ++H N KS NILL V+++D G + + ++ S
Sbjct: 118 -QIAAVCRECLQALEFLHSNQVIHRNIKSDNILLGMDGSVKLTDFGFCAQI-TPEQSKRS 175
Query: 605 EGLLTAHGSGAPEFESGSYSCQSDVYSLGVVMLELLTGRKPYDRSRP-RGEQSLVRWAIP 663
+ T + +Y + D++SLG++ +E++ G PY P R + P
Sbjct: 176 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTP 235
Query: 664 RLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQ 714
L + + LS + F D ++RC++ + R E++Q
Sbjct: 236 ELQNPEKLSAI----------------FRDFLNRCLEMDVEKRGSAKELIQ 270
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 96/213 (45%), Gaps = 23/213 (10%)
Query: 441 SFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGN 499
S+++ IG G G VY+A+L G+L+A+KK+ + + + + + +L H N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMR------KLDHCN 74
Query: 500 IVELIGYCNEHGQHL------LVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAAR 553
IV L + G+ LV DY T++ + A + I V L +
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPV---IYVKLYMYQ 130
Query: 554 ALQYLQEVCEPPIVHGNFKSSNILLD-EKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHG 612
+ L + I H + K N+LLD + ++++ D G A L G N + +
Sbjct: 131 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SYICSRY 187
Query: 613 SGAPE--FESGSYSCQSDVYSLGVVMLELLTGR 643
APE F + Y+ DV+S G V+ ELL G+
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 125/275 (45%), Gaps = 30/275 (10%)
Query: 442 FSEGNFIGEGLLGSVYKA-ELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNI 500
F++ IG+G G V+K + K++A+K + ++ + ++ E+ + +S+ +
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEI-TVLSQCDSPYV 87
Query: 501 VELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQE 560
+ G + + ++ +Y G + DLL + + +R + L YL
Sbjct: 88 TKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILR-----EILKGLDYLHS 142
Query: 561 VCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPE-FE 619
+ +H + K++N+LL E V+++D G+A L T + APE +
Sbjct: 143 EKK---IHRDIKAANVLLSEHGEVKLADFGVAGQL--TDTQIKRNTFVGTPFWMAPEVIK 197
Query: 620 SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSL 679
+Y ++D++SLG+ +EL G P+ P V + IP+ + P+L
Sbjct: 198 QSAYDSKADIWSLGITAIELARGEPPHSELHPMK----VLFLIPKNN---------PPTL 244
Query: 680 DGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQ 714
+G Y +K L F + C+ EP FRP E+++
Sbjct: 245 EGNY-SKPLKEF---VEACLNKEPSFRPTAKELLK 275
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 116/276 (42%), Gaps = 32/276 (11%)
Query: 442 FSEGNFIGEGLLGSVYKAELPGGK-LLAVKKLSNTVSQRQTDEEFLELASTI-SRLRHGN 499
F G +G+G G+VY A K +LA+K L ++ E L I S LRH N
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 500 IVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQ 559
I+ L GY ++ + L+ +Y T++ L + KF A AL Y
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCH 130
Query: 560 EVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE 619
++H + K N+LL ++++D G + S +L L PE
Sbjct: 131 ---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTL----DYLPPEMI 183
Query: 620 SGS-YSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPS 678
G + + D++SLGV+ E L G+ P+ E + + R+ ++ D
Sbjct: 184 EGRMHDEKVDLWSLGVLCYEFLVGKPPF-------EANTYQETYKRISRVEFT--FPDFV 234
Query: 679 LDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQ 714
+GA D+ISR ++ P RP + E+++
Sbjct: 235 TEGA---------RDLISRLLKHNPSQRPMLREVLE 261
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 111/291 (38%), Gaps = 37/291 (12%)
Query: 440 NSFSEGNFIGEGLLGSVYKAELPG-GK-----LLAVKKLSNTVSQRQTDEEFLELASTIS 493
N+ G +G G G V +A G GK +AVK L +T + + EL
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 494 RLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAAR 553
+H NIV L+G C G L++ +Y C DLL+ + + +A A
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEY---CCYGDLLNFLRRKSRVLETDPAFAIANSTAS 162
Query: 554 A---LQYLQEVCE-------PPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNEL 603
L + +V + +H + + N+LL + ++ D GLA + + S +
Sbjct: 163 TRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV 222
Query: 604 SEGLLTAHGSGAPE-FESGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWA 661
APE Y+ QSDV+S G+++ E+ + G PY
Sbjct: 223 KGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY--------------- 267
Query: 662 IPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEI 712
P + ++V A A + I+ C EP RP +I
Sbjct: 268 -PGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQI 317
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 116/283 (40%), Gaps = 41/283 (14%)
Query: 448 IGEGLLGSVYKA---ELPGGKL---LAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIV 501
+G+G G VY+ ++ G+ +AVK ++ + S R+ E FL AS + ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE-FLNEASVMKGFTCHHVV 83
Query: 502 ELIGYCNEHGQHLLVYDYGGNCTLHDLLHS------DEEAHKKFSWNIRIRVALGAARAL 555
L+G ++ L+V + + L L S + + I++A A +
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 556 QYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLA-PLLFSGSTNELSEGLLTAHGSG 614
YL VH + + N ++ V++ D G+ + + + +GLL
Sbjct: 144 AYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMA 200
Query: 615 APEFESGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSR 673
+ G ++ SD++S GVV+ E+ + +PY Q L + +
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITSLAEQPY--------QGLSNEQVLKF-------- 244
Query: 674 MVDPSLDGAYLAK---SLSRFADIISRCVQWEPGFRPPMSEIV 713
+DG YL + R D++ C Q+ P RP EIV
Sbjct: 245 ----VMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIV 283
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 96/213 (45%), Gaps = 23/213 (10%)
Query: 441 SFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGN 499
S+++ IG G G VY+A+L G+L+A+KK+ + + + + + +L H N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMR------KLDHCN 74
Query: 500 IVELIGYCNEHGQHL------LVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAAR 553
IV L + G+ LV DY T++ + A + I V L +
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVP-ATVYRVARHYSRAKQTLPV---IYVKLYMYQ 130
Query: 554 ALQYLQEVCEPPIVHGNFKSSNILLD-EKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHG 612
+ L + I H + K N+LLD + ++++ D G A L G N + +
Sbjct: 131 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SXICSRY 187
Query: 613 SGAPE--FESGSYSCQSDVYSLGVVMLELLTGR 643
APE F + Y+ DV+S G V+ ELL G+
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 117/288 (40%), Gaps = 38/288 (13%)
Query: 433 ASLQQYTNSFSEGNFIGEGLLGSVYKAELPGGK-LLAVKKLSNTVSQRQTDEEFLELAST 491
A Q F G +G+G G+VY A K +LA+K L ++ E L
Sbjct: 1 AKRQWALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVE 60
Query: 492 I-SRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALG 550
I S LRH NI+ L GY ++ + L+ +Y T++ L + KF
Sbjct: 61 IQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITE 116
Query: 551 AARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTA 610
A AL Y ++H + K N+LL ++++D G + S L L
Sbjct: 117 LANALSYCH---SKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTL--- 170
Query: 611 HGSGAPEFESGS-YSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQ---SLVRWAIPRLH 666
PE G + + D++SLGV+ E L G+ P++ + + S V + P
Sbjct: 171 -DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFTFP--- 226
Query: 667 DIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQ 714
D +GA D+ISR ++ P RP + E+++
Sbjct: 227 ---------DFVTEGA---------RDLISRLLKHNPSQRPMLREVLE 256
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 104/208 (50%), Gaps = 18/208 (8%)
Query: 448 IGEGLLGSVYKA-ELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGY 506
+GEG GSVYKA G+++A+K+ V +E ++ S + + ++V+ G
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQ----VPVESDLQEIIKEISIMQQCDSPHVVKYYGS 92
Query: 507 CNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPI 566
++ +V +Y G ++ D++ +K + + + + L+YL + +
Sbjct: 93 YFKNTDLWIVMEYCGAGSVSDIIRL---RNKTLTEDEIATILQSTLKGLEYLHFMRK--- 146
Query: 567 VHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSE--GLLTAHGSGAPE-FESGSY 623
+H + K+ NILL+ + +++D G+A L T+ +++ ++ APE + Y
Sbjct: 147 IHRDIKAGNILLNTEGHAKLADFGVAGQL----TDXMAKRNXVIGTPFWMAPEVIQEIGY 202
Query: 624 SCQSDVYSLGVVMLELLTGRKPYDRSRP 651
+C +D++SLG+ +E+ G+ PY P
Sbjct: 203 NCVADIWSLGITAIEMAEGKPPYADIHP 230
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 87/213 (40%), Gaps = 32/213 (15%)
Query: 448 IGEGLLGSVYKAELPGGKLLAVKKLSNT---VSQRQTDEEFLELASTISRLRHGNIVELI 504
IG+G G V + K + K N V + + F EL + L H +V L
Sbjct: 23 IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKEL-QIMQGLEHPFLVNLW 81
Query: 505 GYCNEHGQHLLVYDY--GGNCTLH--DLLHSDEEAHKKFSWNIRIRVALGAARALQYLQE 560
+ +V D GG+ H +H EE K F + AL YLQ
Sbjct: 82 YSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICEL--------VMALDYLQN 133
Query: 561 VCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG---APE 617
I+H + K NILLDE V ++D +A +L + + T G+ APE
Sbjct: 134 ---QRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQ------ITTMAGTKPYMAPE 184
Query: 618 FES----GSYSCQSDVYSLGVVMLELLTGRKPY 646
S YS D +SLGV ELL GR+PY
Sbjct: 185 MFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPY 217
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 125/275 (45%), Gaps = 30/275 (10%)
Query: 442 FSEGNFIGEGLLGSVYKA-ELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNI 500
F++ IG+G G V+K + K++A+K + ++ + ++ E+ + +S+ +
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEI-TVLSQCDSPYV 82
Query: 501 VELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQE 560
+ G + + ++ +Y G + DLL + + +R + L YL
Sbjct: 83 TKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILR-----EILKGLDYLHS 137
Query: 561 VCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPE-FE 619
+ +H + K++N+LL E V+++D G+A L T + APE +
Sbjct: 138 EKK---IHRDIKAANVLLSEHGEVKLADFGVAGQL--TDTQIKRNXFVGTPFWMAPEVIK 192
Query: 620 SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSL 679
+Y ++D++SLG+ +EL G P+ P V + IP+ + P+L
Sbjct: 193 QSAYDSKADIWSLGITAIELARGEPPHSELHPMK----VLFLIPKNN---------PPTL 239
Query: 680 DGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQ 714
+G Y +K L F + C+ EP FRP E+++
Sbjct: 240 EGNY-SKPLKEF---VEACLNKEPSFRPTAKELLK 270
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 116/283 (40%), Gaps = 41/283 (14%)
Query: 448 IGEGLLGSVYKA---ELPGGKL---LAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIV 501
+G+G G VY+ ++ G+ +AVK ++ + S R+ E FL AS + ++V
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE-FLNEASVMKGFTCHHVV 80
Query: 502 ELIGYCNEHGQHLLVYDYGGNCTLHDLLHS------DEEAHKKFSWNIRIRVALGAARAL 555
L+G ++ L+V + + L L S + + I++A A +
Sbjct: 81 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 140
Query: 556 QYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLA-PLLFSGSTNELSEGLLTAHGSG 614
YL VH + + N ++ V++ D G+ + + + +GLL
Sbjct: 141 AYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMA 197
Query: 615 APEFESGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSR 673
+ G ++ SD++S GVV+ E+ + +PY Q L + +
Sbjct: 198 PESLKDGVFTTSSDMWSFGVVLWEITSLAEQPY--------QGLSNEQVLKF-------- 241
Query: 674 MVDPSLDGAYLAK---SLSRFADIISRCVQWEPGFRPPMSEIV 713
+DG YL + R D++ C Q+ P RP EIV
Sbjct: 242 ----VMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIV 280
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 116/276 (42%), Gaps = 32/276 (11%)
Query: 442 FSEGNFIGEGLLGSVYKAELPGGK-LLAVKKLSNTVSQRQTDEEFLELASTI-SRLRHGN 499
F G +G+G G+VY A K +LA+K L ++ E L I S LRH N
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 500 IVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQ 559
I+ L GY ++ + L+ +Y T++ L + KF A AL Y
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCH 125
Query: 560 EVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE 619
++H + K N+LL ++++D G + S +L L PE
Sbjct: 126 ---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTL----DYLPPEMI 178
Query: 620 SGS-YSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPS 678
G + + D++SLGV+ E L G+ P+ E + + R+ ++ D
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGKPPF-------EANTYQETYKRISRVEFT--FPDFV 229
Query: 679 LDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQ 714
+GA D+ISR ++ P RP + E+++
Sbjct: 230 TEGA---------RDLISRLLKHNPSQRPMLREVLE 256
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 70/139 (50%), Gaps = 9/139 (6%)
Query: 515 LVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSS 574
+V +Y TL D++H++ K + I V A +AL + + I+H + K +
Sbjct: 93 IVMEYVDGVTLRDIVHTEGPMTPKRA----IEVIADACQALNFSHQNG---IIHRDVKPA 145
Query: 575 NILLDEKLIVRVSDCGLAPLLF-SGSTNELSEGLLTAHGSGAPEFESG-SYSCQSDVYSL 632
NI++ V+V D G+A + SG++ + ++ +PE G S +SDVYSL
Sbjct: 146 NIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 205
Query: 633 GVVMLELLTGRKPYDRSRP 651
G V+ E+LTG P+ P
Sbjct: 206 GCVLYEVLTGEPPFTGDSP 224
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 116/276 (42%), Gaps = 32/276 (11%)
Query: 442 FSEGNFIGEGLLGSVYKAELPGGK-LLAVKKLSNTVSQRQTDEEFLELASTI-SRLRHGN 499
F G +G+G G+VY A K +LA+K L ++ E L I S LRH N
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 70
Query: 500 IVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQ 559
I+ L GY ++ + L+ +Y T++ L + KF A AL Y
Sbjct: 71 ILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCH 126
Query: 560 EVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE 619
++H + K N+LL ++++D G + S + L L PE
Sbjct: 127 ---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDTLCGTL----DYLPPEMI 179
Query: 620 SGS-YSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPS 678
G + + D++SLGV+ E L G+ P+ E + + R+ ++ D
Sbjct: 180 EGRMHDEKVDLWSLGVLCYEFLVGKPPF-------EANTYQETYKRISRVEFT--FPDFV 230
Query: 679 LDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQ 714
+GA D+ISR ++ P RP + E+++
Sbjct: 231 TEGA---------RDLISRLLKHNPSQRPMLREVLE 257
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 113/298 (37%), Gaps = 50/298 (16%)
Query: 445 GNFIGEGLLGSVYKAELPG------GKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHG 498
G +G G G V +A+ G + +AVK L + + EL I H
Sbjct: 23 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 82
Query: 499 NIVELIGYCNEHGQHLLVY-DYGGNCTLHDLLHSD-----------EEAHKKF-SWNIRI 545
N+V L+G C + G L+V ++ L L S E+ +K F + I
Sbjct: 83 NVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 142
Query: 546 RVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSE 605
+ A+ +++L +H + + NILL EK +V++ D GLA +
Sbjct: 143 CYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 199
Query: 606 GLLTAHGSGAPE-FESGSYSCQSDVYSLGVVMLELLT-GRKPY-----DRSRPRGEQSLV 658
APE Y+ QSDV+S GV++ E+ + G PY D R +
Sbjct: 200 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT 259
Query: 659 RWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDL 716
R P + M+D C EP RP SE+V+ L
Sbjct: 260 RMRAPDYTTPEMYQTMLD---------------------CWHGEPSQRPTFSELVEHL 296
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 70/139 (50%), Gaps = 9/139 (6%)
Query: 515 LVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSS 574
+V +Y TL D++H++ K + I V A +AL + + I+H + K +
Sbjct: 93 IVMEYVDGVTLRDIVHTEGPMTPKRA----IEVIADACQALNFSHQNG---IIHRDVKPA 145
Query: 575 NILLDEKLIVRVSDCGLAPLLF-SGSTNELSEGLLTAHGSGAPEFESG-SYSCQSDVYSL 632
NI++ V+V D G+A + SG++ + ++ +PE G S +SDVYSL
Sbjct: 146 NIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 205
Query: 633 GVVMLELLTGRKPYDRSRP 651
G V+ E+LTG P+ P
Sbjct: 206 GCVLYEVLTGEPPFTGDSP 224
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 113/298 (37%), Gaps = 50/298 (16%)
Query: 445 GNFIGEGLLGSVYKAELPG------GKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHG 498
G +G G G V +A+ G + +AVK L + + EL I H
Sbjct: 23 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 82
Query: 499 NIVELIGYCNEHGQHLLV-YDYGGNCTLHDLLHSD-----------EEAHKKF-SWNIRI 545
N+V L+G C + G L+V ++ L L S E+ +K F + I
Sbjct: 83 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 142
Query: 546 RVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSE 605
+ A+ +++L +H + + NILL EK +V++ D GLA +
Sbjct: 143 CYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 199
Query: 606 GLLTAHGSGAPE-FESGSYSCQSDVYSLGVVMLELLT-GRKPY-----DRSRPRGEQSLV 658
APE Y+ QSDV+S GV++ E+ + G PY D R +
Sbjct: 200 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT 259
Query: 659 RWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDL 716
R P + M+D C EP RP SE+V+ L
Sbjct: 260 RMRAPDYTTPEMYQTMLD---------------------CWHGEPSQRPTFSELVEHL 296
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 118/287 (41%), Gaps = 32/287 (11%)
Query: 431 TIASLQQYTNSFSEGNFIGEGLLGSVYKAELPGGK-LLAVKKLSNTVSQRQTDEEFLELA 489
+ S Q F G +G+G G+VY A K +LA+K L ++ E L
Sbjct: 2 AMGSRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 61
Query: 490 STI-SRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVA 548
I S LRH NI+ L GY ++ + L+ +Y T++ L + KF
Sbjct: 62 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYI 117
Query: 549 LGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLL 608
A AL Y ++H + K N+LL ++++D G + S L L
Sbjct: 118 TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTL- 173
Query: 609 TAHGSGAPEFESGS-YSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHD 667
PE G + + D++SLGV+ E L G+ P+ E + + R+
Sbjct: 174 ---DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-------EANTYQETYKRISR 223
Query: 668 IDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQ 714
++ D +GA D+ISR ++ P RP + E+++
Sbjct: 224 VEFT--FPDFVTEGA---------RDLISRLLKHNPSQRPMLREVLE 259
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 70/139 (50%), Gaps = 9/139 (6%)
Query: 515 LVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSS 574
+V +Y TL D++H++ K + I V A +AL + + I+H + K +
Sbjct: 110 IVMEYVDGVTLRDIVHTEGPMTPKRA----IEVIADACQALNFSHQNG---IIHRDVKPA 162
Query: 575 NILLDEKLIVRVSDCGLAPLLF-SGSTNELSEGLLTAHGSGAPEFESG-SYSCQSDVYSL 632
NI++ V+V D G+A + SG++ + ++ +PE G S +SDVYSL
Sbjct: 163 NIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 222
Query: 633 GVVMLELLTGRKPYDRSRP 651
G V+ E+LTG P+ P
Sbjct: 223 GCVLYEVLTGEPPFTGDSP 241
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 113/298 (37%), Gaps = 50/298 (16%)
Query: 445 GNFIGEGLLGSVYKAELPG------GKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHG 498
G +G G G V +A+ G + +AVK L + + EL I H
Sbjct: 32 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 91
Query: 499 NIVELIGYCNEHGQHLLV-YDYGGNCTLHDLLHSD-----------EEAHKKF-SWNIRI 545
N+V L+G C + G L+V ++ L L S E+ +K F + I
Sbjct: 92 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 151
Query: 546 RVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSE 605
+ A+ +++L +H + + NILL EK +V++ D GLA +
Sbjct: 152 CYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 208
Query: 606 GLLTAHGSGAPE-FESGSYSCQSDVYSLGVVMLELLT-GRKPY-----DRSRPRGEQSLV 658
APE Y+ QSDV+S GV++ E+ + G PY D R +
Sbjct: 209 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT 268
Query: 659 RWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDL 716
R P + M+D C EP RP SE+V+ L
Sbjct: 269 RMRAPDYTTPEMYQTMLD---------------------CWHGEPSQRPTFSELVEHL 305
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 94/207 (45%), Gaps = 11/207 (5%)
Query: 440 NSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGN 499
+ F + +G G G V K + L+ +KL + + + + +
Sbjct: 16 DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 75
Query: 500 IVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQ 559
IV G G+ + ++ +L +L +EA K+ I +V++ R L YL+
Sbjct: 76 IVGFYGAFYSDGEISICMEHMDGGSLDQVL---KEA-KRIPEEILGKVSIAVLRGLAYLR 131
Query: 560 EVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE 619
E + I+H + K SNIL++ + +++ D G++ L N + APE
Sbjct: 132 EKHQ--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN----SFVGTRSYMAPERL 185
Query: 620 SGS-YSCQSDVYSLGVVMLELLTGRKP 645
G+ YS QSD++S+G+ ++EL GR P
Sbjct: 186 QGTHYSVQSDIWSMGLSLVELAVGRYP 212
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 128/292 (43%), Gaps = 41/292 (14%)
Query: 431 TIASLQQYTNSFSEGNFIGEGLLGSVYKA-ELPGGKLLAVKKLSNTVSQRQTDEEFLELA 489
+I S+ ++ IG+G G+VY A ++ G+ +A+++++ Q+Q +E +
Sbjct: 11 SIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN---LQQQPKKELI--I 65
Query: 490 STISRLRHGNIVELIGYCNEH--GQHL-LVYDYGGNCTLHDLLHS---DEEAHKKFSWNI 543
+ I +R ++ Y + + G L +V +Y +L D++ DE
Sbjct: 66 NEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEG--------- 116
Query: 544 RIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNEL 603
++A LQ L+ + ++H + KS NILL V+++D G + + ++
Sbjct: 117 --QIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQI-TPEQSKR 173
Query: 604 SEGLLTAHGSGAPEFESGSYSCQSDVYSLGVVMLELLTGRKPYDRSRP-RGEQSLVRWAI 662
SE + T + +Y + D++SLG++ +E++ G PY P R +
Sbjct: 174 SEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGT 233
Query: 663 PRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQ 714
P L + + LS + F D ++RC+ + R E++Q
Sbjct: 234 PELQNPEKLSAI----------------FRDFLNRCLDMDVEKRGSAKELLQ 269
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 125/275 (45%), Gaps = 30/275 (10%)
Query: 442 FSEGNFIGEGLLGSVYKA-ELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNI 500
F++ IG+G G V+K + K++A+K + ++ + ++ E+ + +S+ +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEI-TVLSQCDSPYV 67
Query: 501 VELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQE 560
+ G + + ++ +Y G + DLL + + +R + L YL
Sbjct: 68 TKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILR-----EILKGLDYLHS 122
Query: 561 VCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPE-FE 619
+ +H + K++N+LL E V+++D G+A L T + APE +
Sbjct: 123 EKK---IHRDIKAANVLLSEHGEVKLADFGVAGQL--TDTQIKRNTFVGTPFWMAPEVIK 177
Query: 620 SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSL 679
+Y ++D++SLG+ +EL G P+ P V + IP+ + P+L
Sbjct: 178 QSAYDSKADIWSLGITAIELARGEPPHSELHPMK----VLFLIPKNN---------PPTL 224
Query: 680 DGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQ 714
+G Y +K L F + C+ EP FRP E+++
Sbjct: 225 EGNY-SKPLKEF---VEACLNKEPSFRPTAKELLK 255
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 91/210 (43%), Gaps = 31/210 (14%)
Query: 448 IGEGLLGSVYKAELP-----GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVE 502
+G+G GSV G+++AVKKL ++ + D F + L+H NIV+
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD--FEREIEILKSLQHDNIVK 78
Query: 503 LIGYCNEHGQH--LLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQE 560
G C G+ L+ ++ +L + L +E + + LQY +
Sbjct: 79 YKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKER-------------IDHIKLLQYTSQ 125
Query: 561 VCE-------PPIVHGNFKSSNILLDEKLIVRVSDCGLAPLL-FSGSTNELSEGLLTAHG 612
+C+ +H + + NIL++ + V++ D GL +L ++ E +
Sbjct: 126 ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 185
Query: 613 SGAPE-FESGSYSCQSDVYSLGVVMLELLT 641
APE +S SDV+S GVV+ EL T
Sbjct: 186 WYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 125/275 (45%), Gaps = 30/275 (10%)
Query: 442 FSEGNFIGEGLLGSVYKA-ELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNI 500
F++ IG+G G V+K + K++A+K + ++ + ++ E+ + +S+ +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEI-TVLSQCDSPYV 67
Query: 501 VELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQE 560
+ G + + ++ +Y G + DLL + + +R + L YL
Sbjct: 68 TKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILR-----EILKGLDYLHS 122
Query: 561 VCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPE-FE 619
+ +H + K++N+LL E V+++D G+A L T + APE +
Sbjct: 123 EKK---IHRDIKAANVLLSEHGEVKLADFGVAGQL--TDTQIKRNXFVGTPFWMAPEVIK 177
Query: 620 SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSL 679
+Y ++D++SLG+ +EL G P+ P V + IP+ + P+L
Sbjct: 178 QSAYDSKADIWSLGITAIELARGEPPHSELHPMK----VLFLIPKNN---------PPTL 224
Query: 680 DGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQ 714
+G Y +K L F + C+ EP FRP E+++
Sbjct: 225 EGNY-SKPLKEF---VEACLNKEPSFRPTAKELLK 255
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 115/276 (41%), Gaps = 32/276 (11%)
Query: 442 FSEGNFIGEGLLGSVYKAELPGGK-LLAVKKLSNTVSQRQTDEEFLELASTI-SRLRHGN 499
F G +G+G G+VY A K +LA+K L ++ E L I S LRH N
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 500 IVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQ 559
I+ L GY ++ + L+ +Y T++ L + KF A AL Y
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCH 130
Query: 560 EVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPE-F 618
++H + K N+LL ++++D G + S L L PE
Sbjct: 131 S---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL----DYLPPEXI 183
Query: 619 ESGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPS 678
E + + D++SLGV+ E L G+ P+ E + + R+ ++ D
Sbjct: 184 EGRXHDEKVDLWSLGVLCYEFLVGKPPF-------EANTYQETYKRISRVEFT--FPDFV 234
Query: 679 LDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQ 714
+GA D+ISR ++ P RP + E+++
Sbjct: 235 TEGA---------RDLISRLLKHNPSQRPXLREVLE 261
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 71/187 (37%), Gaps = 31/187 (16%)
Query: 27 VTDPRDVMALNSLYISLNFPP-LEKWLSFGGDPCGDSWQGVFCVFSNVTEIRLTGMNLGG 85
+ +P+D AL + L P L WL D C +W GV C
Sbjct: 2 LCNPQDKQALLQIKKDLGNPTTLSSWLP-TTDCCNRTWLGVLC----------------- 43
Query: 86 VLADTLGDLESVINIDLSNNHIGGSIP-----SNLPVTVRNFSLSG--NQLTGSIPEXXX 138
DT V N+DLS ++ P +NLP NF G N L G IP
Sbjct: 44 ---DTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYL--NFLYIGGINNLVGPIPPAIA 98
Query: 139 XXXXXXXXXXXXXXXXGGIPDAFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQN 198
G IPD Q L+ D S N L+G LPPS +L +L +
Sbjct: 99 KLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDG 158
Query: 199 NKLSGTL 205
N++SG +
Sbjct: 159 NRISGAI 165
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 115/276 (41%), Gaps = 32/276 (11%)
Query: 442 FSEGNFIGEGLLGSVYKAELPGGK-LLAVKKLSNTVSQRQTDEEFLELASTI-SRLRHGN 499
F G +G+G G+VY A K +LA+K L ++ E L I S LRH N
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 500 IVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQ 559
I+ L GY ++ + L+ +Y T++ L + KF A AL Y
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCH 125
Query: 560 EVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE 619
++H + K N+LL ++++D G + S L L PE
Sbjct: 126 ---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL----DYLPPEMI 178
Query: 620 SGS-YSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPS 678
G + + D++SLGV+ E L G+ P+ E + + R+ ++ D
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGKPPF-------EANTYQETYKRISRVEFT--FPDFV 229
Query: 679 LDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQ 714
+GA D+ISR ++ P RP + E+++
Sbjct: 230 TEGA---------RDLISRLLKHNPSQRPMLREVLE 256
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 113/290 (38%), Gaps = 33/290 (11%)
Query: 440 NSFSEGNFIGEGLLGSVYKAELPG-GK-----LLAVKKLSNTVSQRQTDEEFLELASTIS 493
N+ G +G G G V +A G GK +AVK L +T + + EL
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 494 RLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWN--------IRI 545
+H NIV L+G C G L++ +Y L + L ++S+N +
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSS 165
Query: 546 RVALG-AARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELS 604
R L +++ Q + + +H + + N+LL + ++ D GLA + + S +
Sbjct: 166 RDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVK 225
Query: 605 EGLLTAHGSGAPE-FESGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAI 662
APE Y+ QSDV+S G+++ E+ + G PY
Sbjct: 226 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY---------------- 269
Query: 663 PRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEI 712
P + ++V A A + I+ C EP RP +I
Sbjct: 270 PGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQI 319
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 117/285 (41%), Gaps = 32/285 (11%)
Query: 433 ASLQQYTNSFSEGNFIGEGLLGSVYKAELPGGK-LLAVKKLSNTVSQRQTDEEFLELAST 491
A Q F G +G+G G+VY A K +LA+K L ++ E L
Sbjct: 1 AKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 60
Query: 492 I-SRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALG 550
I S LRH NI+ L GY ++ + L+ +Y T++ L + KF
Sbjct: 61 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITE 116
Query: 551 AARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTA 610
A AL Y ++H + K N+LL ++++D G + S L L
Sbjct: 117 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTL--- 170
Query: 611 HGSGAPEFESGS-YSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDID 669
PE G + + D++SLGV+ E L G+ P+ E + + R+ ++
Sbjct: 171 -DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-------EANTYQETYKRISRVE 222
Query: 670 ALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQ 714
D +GA D+ISR ++ P RP + E+++
Sbjct: 223 FT--FPDFVTEGA---------RDLISRLLKHNPSQRPMLREVLE 256
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 115/276 (41%), Gaps = 32/276 (11%)
Query: 442 FSEGNFIGEGLLGSVYKAELPGGK-LLAVKKLSNTVSQRQTDEEFLELASTI-SRLRHGN 499
F G +G+G G+VY A K +LA+K L ++ E L I S LRH N
Sbjct: 36 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 95
Query: 500 IVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQ 559
I+ L GY ++ + L+ +Y T++ L + KF A AL Y
Sbjct: 96 ILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCH 151
Query: 560 EVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE 619
++H + K N+LL ++++D G + S L L PE
Sbjct: 152 ---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL----DYLPPEMI 204
Query: 620 SGS-YSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPS 678
G + + D++SLGV+ E L G+ P+ E + + R+ ++ D
Sbjct: 205 EGRMHDEKVDLWSLGVLCYEFLVGKPPF-------EANTYQETYKRISRVEFT--FPDFV 255
Query: 679 LDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQ 714
+GA D+ISR ++ P RP + E+++
Sbjct: 256 TEGA---------RDLISRLLKHNPSQRPMLREVLE 282
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 115/276 (41%), Gaps = 32/276 (11%)
Query: 442 FSEGNFIGEGLLGSVYKAELPGGK-LLAVKKLSNTVSQRQTDEEFLELASTI-SRLRHGN 499
F G +G+G G+VY A K +LA+K L ++ E L I S LRH N
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 500 IVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQ 559
I+ L GY ++ + L+ +Y T++ L + KF A AL Y
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCH 130
Query: 560 EVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE 619
++H + K N+LL ++++D G + S L L PE
Sbjct: 131 ---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL----DYLPPEMI 183
Query: 620 SGS-YSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPS 678
G + + D++SLGV+ E L G+ P+ E + + R+ ++ D
Sbjct: 184 EGRMHDEKVDLWSLGVLCYEFLVGKPPF-------EANTYQETYKRISRVEFT--FPDFV 234
Query: 679 LDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQ 714
+GA D+ISR ++ P RP + E+++
Sbjct: 235 TEGA---------RDLISRLLKHNPSQRPMLREVLE 261
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 115/276 (41%), Gaps = 32/276 (11%)
Query: 442 FSEGNFIGEGLLGSVYKAELPGGK-LLAVKKLSNTVSQRQTDEEFLELASTI-SRLRHGN 499
F G +G+G G+VY A K +LA+K L ++ E L I S LRH N
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 500 IVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQ 559
I+ L GY ++ + L+ +Y T++ L + KF A AL Y
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCH 128
Query: 560 EVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE 619
++H + K N+LL ++++D G + S L L PE
Sbjct: 129 ---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL----DYLPPEMI 181
Query: 620 SGS-YSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPS 678
G + + D++SLGV+ E L G+ P+ E + + R+ ++ D
Sbjct: 182 EGRMHDEKVDLWSLGVLCYEFLVGKPPF-------EANTYQETYKRISRVEFT--FPDFV 232
Query: 679 LDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQ 714
+GA D+ISR ++ P RP + E+++
Sbjct: 233 TEGA---------RDLISRLLKHNPSQRPMLREVLE 259
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 107/276 (38%), Gaps = 32/276 (11%)
Query: 447 FIGEGLLGSVYKAEL---PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVEL 503
+GEG G VY+ G K+ K E+F+ A + L H +IV+L
Sbjct: 31 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 90
Query: 504 IGYCNEHGQHLLV--YDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEV 561
IG E +++ Y YG +L H E + +L +A+ YL+ +
Sbjct: 91 IGIIEEEPTWIIMELYPYG------ELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESI 144
Query: 562 CEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFESG 621
VH + NIL+ V++ D GL+ + + S L
Sbjct: 145 ---NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFR 201
Query: 622 SYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLD 680
++ SDV+ V M E+L+ G++P+ + I L D L + P L
Sbjct: 202 RFTTASDVWMFAVCMWEILSFGKQPFFWLENKD-------VIGVLEKGDRLPK---PDLC 251
Query: 681 GAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDL 716
L +++RC ++P RP +E+V L
Sbjct: 252 PPVLYT-------LMTRCWDYDPSDRPRFTELVCSL 280
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 107/276 (38%), Gaps = 32/276 (11%)
Query: 447 FIGEGLLGSVYKAEL---PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVEL 503
+GEG G VY+ G K+ K E+F+ A + L H +IV+L
Sbjct: 19 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 78
Query: 504 IGYCNEHGQHLLV--YDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEV 561
IG E +++ Y YG +L H E + +L +A+ YL+ +
Sbjct: 79 IGIIEEEPTWIIMELYPYG------ELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESI 132
Query: 562 CEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFESG 621
VH + NIL+ V++ D GL+ + + S L
Sbjct: 133 ---NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFR 189
Query: 622 SYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLD 680
++ SDV+ V M E+L+ G++P+ + I L D L + P L
Sbjct: 190 RFTTASDVWMFAVCMWEILSFGKQPFFWLENKD-------VIGVLEKGDRLPK---PDLC 239
Query: 681 GAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDL 716
L +++RC ++P RP +E+V L
Sbjct: 240 PPVLYT-------LMTRCWDYDPSDRPRFTELVCSL 268
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 115/278 (41%), Gaps = 32/278 (11%)
Query: 440 NSFSEGNFIGEGLLGSVYKAELPGGK-LLAVKKLSNTVSQRQTDEEFLELASTI-SRLRH 497
F G +G+G G+VY A K +LA+K L ++ E L I S LRH
Sbjct: 7 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 66
Query: 498 GNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQY 557
NI+ L GY ++ + L+ +Y T++ L + KF A AL Y
Sbjct: 67 PNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSY 122
Query: 558 LQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPE 617
++H + K N+LL ++++D G + S L L PE
Sbjct: 123 CH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL----DYLPPE 175
Query: 618 FESGS-YSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVD 676
G + + D++SLGV+ E L G+ P+ E + + R+ ++ D
Sbjct: 176 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-------EANTYQETYKRISRVEFT--FPD 226
Query: 677 PSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQ 714
+GA D+ISR ++ P RP + E+++
Sbjct: 227 FVTEGA---------RDLISRLLKHNPSQRPMLREVLE 255
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 127/281 (45%), Gaps = 48/281 (17%)
Query: 447 FIGEGLLGSVYK-AELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISR-LRHGNIVELI 504
F+G+G ++ ++ ++ A K + ++ + E + + +I R L H ++V
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 505 GYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEV--- 561
G+ ++ +V + C LL E HK+ R AL A YL+++
Sbjct: 84 GFFEDNDFVFVVLEL---CRRRSLL----ELHKR-------RKALTEPEARYYLRQIVLG 129
Query: 562 CE----PPIVHGNFKSSNILLDEKLIVRVSDCGLAPLL-FSGSTNELSEGLLTAHGSGAP 616
C+ ++H + K N+ L+E L V++ D GLA + + G E + L AP
Sbjct: 130 CQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG---ERKKTLCGTPNYIAP 186
Query: 617 EFESGS-YSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDID-ALSRM 674
E S +S + DV+S+G +M LL G+ P+ E S ++ R+ + ++ +
Sbjct: 187 EVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF-------ETSCLKETYLRIKKNEYSIPKH 239
Query: 675 VDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715
++P A +I + +Q +P RP ++E++ D
Sbjct: 240 INPVA------------ASLIQKMLQTDPTARPTINELLND 268
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 127/281 (45%), Gaps = 48/281 (17%)
Query: 447 FIGEGLLGSVYK-AELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISR-LRHGNIVELI 504
F+G+G ++ ++ ++ A K + ++ + E + + +I R L H ++V
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 505 GYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEV--- 561
G+ ++ +V + C LL E HK+ R AL A YL+++
Sbjct: 84 GFFEDNDFVFVVLEL---CRRRSLL----ELHKR-------RKALTEPEARYYLRQIVLG 129
Query: 562 CE----PPIVHGNFKSSNILLDEKLIVRVSDCGLAPLL-FSGSTNELSEGLLTAHGSGAP 616
C+ ++H + K N+ L+E L V++ D GLA + + G E + L AP
Sbjct: 130 CQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG---ERKKTLCGTPNYIAP 186
Query: 617 EFESGS-YSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDID-ALSRM 674
E S +S + DV+S+G +M LL G+ P+ E S ++ R+ + ++ +
Sbjct: 187 EVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF-------ETSCLKETYLRIKKNEYSIPKH 239
Query: 675 VDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715
++P A +I + +Q +P RP ++E++ D
Sbjct: 240 INPVA------------ASLIQKMLQTDPTARPTINELLND 268
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 115/278 (41%), Gaps = 32/278 (11%)
Query: 440 NSFSEGNFIGEGLLGSVYKAELPGGK-LLAVKKLSNTVSQRQTDEEFLELASTI-SRLRH 497
F G +G+G G+VY A K +LA+K L ++ E L I S LRH
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 498 GNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQY 557
NI+ L GY ++ + L+ +Y T++ L + KF A AL Y
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSY 123
Query: 558 LQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPE 617
++H + K N+LL ++++D G + S L L PE
Sbjct: 124 CH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTXLCGTL----DYLPPE 176
Query: 618 FESGS-YSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVD 676
G + + D++SLGV+ E L G+ P+ E + + R+ ++ D
Sbjct: 177 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-------EANTYQETYKRISRVEFT--FPD 227
Query: 677 PSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQ 714
+GA D+ISR ++ P RP + E+++
Sbjct: 228 FVTEGA---------RDLISRLLKHNPSQRPMLREVLE 256
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 127/281 (45%), Gaps = 48/281 (17%)
Query: 447 FIGEGLLGSVYK-AELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISR-LRHGNIVELI 504
F+G+G ++ ++ ++ A K + ++ + E + + +I R L H ++V
Sbjct: 28 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 87
Query: 505 GYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEV--- 561
G+ ++ +V + C LL E HK+ R AL A YL+++
Sbjct: 88 GFFEDNDFVFVVLEL---CRRRSLL----ELHKR-------RKALTEPEARYYLRQIVLG 133
Query: 562 CE----PPIVHGNFKSSNILLDEKLIVRVSDCGLAPLL-FSGSTNELSEGLLTAHGSGAP 616
C+ ++H + K N+ L+E L V++ D GLA + + G E + L AP
Sbjct: 134 CQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG---ERKKTLCGTPNYIAP 190
Query: 617 EFESGS-YSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDID-ALSRM 674
E S +S + DV+S+G +M LL G+ P+ E S ++ R+ + ++ +
Sbjct: 191 EVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF-------ETSCLKETYLRIKKNEYSIPKH 243
Query: 675 VDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715
++P A +I + +Q +P RP ++E++ D
Sbjct: 244 INPVA------------ASLIQKMLQTDPTARPTINELLND 272
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 107/276 (38%), Gaps = 32/276 (11%)
Query: 447 FIGEGLLGSVYKAEL---PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVEL 503
+GEG G VY+ G K+ K E+F+ A + L H +IV+L
Sbjct: 15 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 74
Query: 504 IGYCNEHGQHLLV--YDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEV 561
IG E +++ Y YG +L H E + +L +A+ YL+ +
Sbjct: 75 IGIIEEEPTWIIMELYPYG------ELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESI 128
Query: 562 CEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFESG 621
VH + NIL+ V++ D GL+ + + S L
Sbjct: 129 ---NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFR 185
Query: 622 SYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLD 680
++ SDV+ V M E+L+ G++P+ + I L D L + P L
Sbjct: 186 RFTTASDVWMFAVCMWEILSFGKQPFFWLENKD-------VIGVLEKGDRLPK---PDLC 235
Query: 681 GAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDL 716
L +++RC ++P RP +E+V L
Sbjct: 236 PPVLYT-------LMTRCWDYDPSDRPRFTELVCSL 264
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 115/278 (41%), Gaps = 32/278 (11%)
Query: 440 NSFSEGNFIGEGLLGSVYKAELPGGK-LLAVKKLSNTVSQRQTDEEFLELASTI-SRLRH 497
F G +G+G G+VY A K +LA+K L ++ E L I S LRH
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 498 GNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQY 557
NI+ L GY ++ + L+ +Y T++ L + KF A AL Y
Sbjct: 71 PNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSY 126
Query: 558 LQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPE 617
++H + K N+LL ++++D G + S L L PE
Sbjct: 127 CH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL----DYLPPE 179
Query: 618 FESGS-YSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVD 676
G + + D++SLGV+ E L G+ P+ E + + R+ ++ D
Sbjct: 180 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-------EANTYQETYKRISRVEFT--FPD 230
Query: 677 PSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQ 714
+GA D+ISR ++ P RP + E+++
Sbjct: 231 FVTEGA---------RDLISRLLKHNPSQRPMLREVLE 259
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 115/276 (41%), Gaps = 32/276 (11%)
Query: 442 FSEGNFIGEGLLGSVYKAELPGGK-LLAVKKLSNTVSQRQTDEEFLELASTI-SRLRHGN 499
F G +G+G G+VY A K +LA+K L ++ E L I S LRH N
Sbjct: 27 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 86
Query: 500 IVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQ 559
I+ L GY ++ + L+ +Y T++ L + KF A AL Y
Sbjct: 87 ILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCH 142
Query: 560 EVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE 619
++H + K N+LL ++++D G + S L L PE
Sbjct: 143 ---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL----DYLPPEMI 195
Query: 620 SGS-YSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPS 678
G + + D++SLGV+ E L G+ P+ E + + R+ ++ D
Sbjct: 196 EGRMHDEKVDLWSLGVLCYEFLVGKPPF-------EANTYQETYKRISRVEFT--FPDFV 246
Query: 679 LDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQ 714
+GA D+ISR ++ P RP + E+++
Sbjct: 247 TEGA---------RDLISRLLKHNPSQRPMLREVLE 273
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 116/282 (41%), Gaps = 32/282 (11%)
Query: 436 QQYTNSFSEGNFIGEGLLGSVYKAELPGGK-LLAVKKLSNTVSQRQTDEEFLELASTI-S 493
Q F G +G+G G+VY A K +LA+K L ++ E L I S
Sbjct: 8 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 67
Query: 494 RLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAAR 553
LRH NI+ L GY ++ + L+ +Y T++ L + KF A
Sbjct: 68 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELAN 123
Query: 554 ALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGS 613
AL Y ++H + K N+LL ++++D G + S L L
Sbjct: 124 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL----DY 176
Query: 614 GAPEFESGS-YSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALS 672
PE G + + D++SLGV+ E L G+ P+ E + + R+ ++
Sbjct: 177 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-------EANTYQETYKRISRVEFT- 228
Query: 673 RMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQ 714
D +GA D+ISR ++ P RP + E+++
Sbjct: 229 -FPDFVTEGA---------RDLISRLLKHNPSQRPMLREVLE 260
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 115/276 (41%), Gaps = 32/276 (11%)
Query: 442 FSEGNFIGEGLLGSVYKAELPGGK-LLAVKKLSNTVSQRQTDEEFLELASTI-SRLRHGN 499
F G +G+G G+VY A K +LA+K L ++ E L I S LRH N
Sbjct: 12 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 71
Query: 500 IVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQ 559
I+ L GY ++ + L+ +Y T++ L + KF A AL Y
Sbjct: 72 ILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCH 127
Query: 560 EVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE 619
++H + K N+LL ++++D G + S L L PE
Sbjct: 128 ---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTL----DYLPPEMI 180
Query: 620 SGS-YSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPS 678
G + + D++SLGV+ E L G+ P+ E + + R+ ++ D
Sbjct: 181 EGRMHDEKVDLWSLGVLCYEFLVGKPPF-------EANTYQETYKRISRVEFT--FPDFV 231
Query: 679 LDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQ 714
+GA D+ISR ++ P RP + E+++
Sbjct: 232 TEGA---------RDLISRLLKHNPSQRPMLREVLE 258
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 128/292 (43%), Gaps = 41/292 (14%)
Query: 431 TIASLQQYTNSFSEGNFIGEGLLGSVYKA-ELPGGKLLAVKKLSNTVSQRQTDEEFLELA 489
+I S+ ++ IG+G G+VY A ++ G+ +A+++++ Q+Q +E +
Sbjct: 12 SIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN---LQQQPKKELI--I 66
Query: 490 STISRLRHGNIVELIGYCNEH--GQHL-LVYDYGGNCTLHDLLHS---DEEAHKKFSWNI 543
+ I +R ++ Y + + G L +V +Y +L D++ DE
Sbjct: 67 NEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEG--------- 117
Query: 544 RIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNEL 603
++A LQ L+ + ++H + KS NILL V+++D G + + ++
Sbjct: 118 --QIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQI-TPEQSKR 174
Query: 604 SEGLLTAHGSGAPEFESGSYSCQSDVYSLGVVMLELLTGRKPYDRSRP-RGEQSLVRWAI 662
S + T + +Y + D++SLG++ +E++ G PY P R +
Sbjct: 175 SXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGT 234
Query: 663 PRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQ 714
P L + + LS + F D ++RC++ + R E++Q
Sbjct: 235 PELQNPEKLSAI----------------FRDFLNRCLEMDVEKRGSAKELIQ 270
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 94/229 (41%), Gaps = 29/229 (12%)
Query: 430 FTIASLQQYTNSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELA 489
F + + ++++++ +G+G V + L K+ NT D + LE
Sbjct: 19 FMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLERE 78
Query: 490 STISR-LRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVA 548
+ I R L+H NIV L E H LV+D L + +I R
Sbjct: 79 ARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFE--------------DIVAREF 124
Query: 549 LGAARALQYLQEVCEP-------PIVHGNFKSSNILLDEK---LIVRVSDCGLAPLLFSG 598
A A +Q++ E IVH N K N+LL K V+++D GLA
Sbjct: 125 YSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA---IEV 181
Query: 599 STNELSEGLLTAHGSGAPE-FESGSYSCQSDVYSLGVVMLELLTGRKPY 646
+ +E G G +PE + YS D+++ GV++ LL G P+
Sbjct: 182 NDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF 230
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 114/276 (41%), Gaps = 32/276 (11%)
Query: 442 FSEGNFIGEGLLGSVYKAELPGGK-LLAVKKLSNTVSQRQTDEEFLELASTI-SRLRHGN 499
F G +G+G G+VY A K +LA+K L ++ E L I S LRH N
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 500 IVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQ 559
I+ L GY ++ + L+ +Y ++ L + KF A AL Y
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPRGEVYKEL----QKLSKFDEQRTATYITELANALSYCH 130
Query: 560 EVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE 619
++H + K N+LL ++++D G + S L L PE
Sbjct: 131 ---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL----DYLPPEMI 183
Query: 620 SGS-YSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPS 678
G + + D++SLGV+ E L G+ P+ E + + R+ ++ D
Sbjct: 184 EGRMHDEKVDLWSLGVLCYEFLVGKPPF-------EANTYQETYKRISRVEFT--FPDFV 234
Query: 679 LDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQ 714
+GA D+ISR ++ P RP + E+++
Sbjct: 235 TEGA---------RDLISRLLKHNPSQRPMLREVLE 261
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 114/276 (41%), Gaps = 32/276 (11%)
Query: 442 FSEGNFIGEGLLGSVYKAELPGGK-LLAVKKLSNTVSQRQTDEEFLELASTI-SRLRHGN 499
F G +G+G G+VY A K +LA+K L ++ E L I S LRH N
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 500 IVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQ 559
I+ L GY ++ + L+ +Y ++ L + KF A AL Y
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPRGEVYKEL----QKLSKFDEQRTATYITELANALSYCH 130
Query: 560 EVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE 619
++H + K N+LL ++++D G + S L L PE
Sbjct: 131 ---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLXGTL----DYLPPEMI 183
Query: 620 SGS-YSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPS 678
G + + D++SLGV+ E L G+ P+ E + + R+ ++ D
Sbjct: 184 EGRMHDEKVDLWSLGVLCYEFLVGKPPF-------EANTYQETYKRISRVEFT--FPDFV 234
Query: 679 LDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQ 714
+GA D+ISR ++ P RP + E+++
Sbjct: 235 TEGA---------RDLISRLLKHNPSQRPMLREVLE 261
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 116/282 (41%), Gaps = 32/282 (11%)
Query: 436 QQYTNSFSEGNFIGEGLLGSVYKAELPGGK-LLAVKKLSNTVSQRQTDEEFLELASTI-S 493
Q F G +G+G G+VY A K +LA+K L ++ E L I S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 494 RLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAAR 553
LRH NI+ L GY ++ + L+ +Y T++ L + KF A
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELAN 119
Query: 554 ALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGS 613
AL Y ++H + K N+LL ++++D G + S L L
Sbjct: 120 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTL----DY 172
Query: 614 GAPEFESGS-YSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALS 672
PE G + + D++SLGV+ E L G+ P+ E + + R+ ++
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-------EANTYQETYKRISRVEFT- 224
Query: 673 RMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQ 714
D +GA D+ISR ++ P RP + E+++
Sbjct: 225 -FPDFVTEGA---------RDLISRLLKHNPSQRPMLREVLE 256
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 118/275 (42%), Gaps = 27/275 (9%)
Query: 440 NSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGN 499
+ F + + +G G G V+K L+ +KL + + + + +
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 68
Query: 500 IVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQ 559
IV G G+ + ++ +L +L + + I +V++ + L YL+
Sbjct: 69 IVGFYGAFYSDGEISICMEHMDGGSLDQVL----KKAGRIPEQILGKVSIAVIKGLTYLR 124
Query: 560 EVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE 619
E + I+H + K SNIL++ + +++ D G++ L NE + +PE
Sbjct: 125 E--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEF----VGTRSYMSPERL 178
Query: 620 SGS-YSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPS 678
G+ YS QSD++S+G+ ++E+ GR P RP AI L +D + P
Sbjct: 179 QGTHYSVQSDIWSMGLSLVEMAVGRYP----RP-------PMAIFEL--LDYIVNEPPPK 225
Query: 679 LDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIV 713
L A + F D +++C+ P R + +++
Sbjct: 226 LPSAVFS---LEFQDFVNKCLIKNPAERADLKQLM 257
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 93/206 (45%), Gaps = 20/206 (9%)
Query: 448 IGEGLLGSVYK-AELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGY 506
+G+G G V K + + AVK ++ ++ + L + +L H NI++L
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 507 CNEHGQHLLVYD-YGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPP 565
+ +V + Y G +++ K+FS + R+ + Y+ +
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEII-----KRKRFSEHDAARIIKQVFSGITYMHK---HN 141
Query: 566 IVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGST-----NELSEGLLTAHGSGAPEFES 620
IVH + K NILL+ K DC + + F ST ++ + + TA+ APE
Sbjct: 142 IVHRDLKPENILLESK----EKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYI-APEVLR 196
Query: 621 GSYSCQSDVYSLGVVMLELLTGRKPY 646
G+Y + DV+S GV++ LL+G P+
Sbjct: 197 GTYDEKCDVWSAGVILYILLSGTPPF 222
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 106/224 (47%), Gaps = 40/224 (17%)
Query: 448 IGEGLLGSVYKA-ELPGGKLLAVKKLSNTVSQRQTDEE--FLELASTISRLRHGNIVELI 504
+G+G G V+K+ + G+++AVKK+ + Q TD + F E+ H NIV L+
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAF-QNSTDAQRTFREIMILTELSGHENIVNLL 75
Query: 505 GYCNEHGQH--LLVYDYGGNCTLHDLLHSD--EEAHKKFSWNIRIRVALGAARALQYLQE 560
LV+DY LH ++ ++ E HK++ V + ++YL
Sbjct: 76 NVLRADNDRDVYLVFDYM-ETDLHAVIRANILEPVHKQY-------VVYQLIKVIKYLHS 127
Query: 561 VCEPPIVHGNFKSSNILLDEKLIVRVSDCGLA-------------PLLFSGSTNELSEG- 606
++H + K SNILL+ + V+V+D GL+ PL + +T +
Sbjct: 128 ---GGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQ 184
Query: 607 -LLTAHGSG----APEFESGS--YSCQSDVYSLGVVMLELLTGR 643
+LT + + APE GS Y+ D++SLG ++ E+L G+
Sbjct: 185 PILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 93/206 (45%), Gaps = 20/206 (9%)
Query: 448 IGEGLLGSVYKA-ELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGY 506
+G+G G V K + + AVK ++ ++ + L + +L H NI++L
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 507 CNEHGQHLLVYD-YGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPP 565
+ +V + Y G +++ K+FS + R+ + Y+ +
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEII-----KRKRFSEHDAARIIKQVFSGITYMHK---HN 141
Query: 566 IVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGST-----NELSEGLLTAHGSGAPEFES 620
IVH + K NILL+ K DC + + F ST ++ + + TA+ APE
Sbjct: 142 IVHRDLKPENILLESK----EKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYI-APEVLR 196
Query: 621 GSYSCQSDVYSLGVVMLELLTGRKPY 646
G+Y + DV+S GV++ LL+G P+
Sbjct: 197 GTYDEKCDVWSAGVILYILLSGTPPF 222
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 127/281 (45%), Gaps = 48/281 (17%)
Query: 447 FIGEGLLGSVYK-AELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISR-LRHGNIVELI 504
F+G+G ++ ++ ++ A K + ++ + E + + +I R L H ++V
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 105
Query: 505 GYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEV--- 561
G+ ++ +V + C LL E HK+ R AL A YL+++
Sbjct: 106 GFFEDNDFVFVVLEL---CRRRSLL----ELHKR-------RKALTEPEARYYLRQIVLG 151
Query: 562 CE----PPIVHGNFKSSNILLDEKLIVRVSDCGLAPLL-FSGSTNELSEGLLTAHGSGAP 616
C+ ++H + K N+ L+E L V++ D GLA + + G E + L AP
Sbjct: 152 CQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG---ERKKVLCGTPNYIAP 208
Query: 617 EFESGS-YSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDID-ALSRM 674
E S +S + DV+S+G +M LL G+ P+ E S ++ R+ + ++ +
Sbjct: 209 EVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF-------ETSCLKETYLRIKKNEYSIPKH 261
Query: 675 VDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715
++P A +I + +Q +P RP ++E++ D
Sbjct: 262 INPVA------------ASLIQKMLQTDPTARPTINELLND 290
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 115/278 (41%), Gaps = 32/278 (11%)
Query: 440 NSFSEGNFIGEGLLGSVYKAELPGGK-LLAVKKLSNTVSQRQTDEEFLELASTI-SRLRH 497
F G +G+G G+VY A K +LA+K L ++ E L I S LRH
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 498 GNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQY 557
NI+ L GY ++ + L+ +Y T++ L + KF A AL Y
Sbjct: 71 PNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSY 126
Query: 558 LQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPE 617
++H + K N+LL ++++D G + S L L PE
Sbjct: 127 CH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTL----DYLPPE 179
Query: 618 FESGS-YSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVD 676
G + + D++SLGV+ E L G+ P+ E + + R+ ++ D
Sbjct: 180 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-------EANTYQETYKRISRVEFT--FPD 230
Query: 677 PSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQ 714
+GA D+ISR ++ P RP + E+++
Sbjct: 231 FVTEGA---------RDLISRLLKHNPSQRPMLREVLE 259
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 127/281 (45%), Gaps = 48/281 (17%)
Query: 447 FIGEGLLGSVYK-AELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISR-LRHGNIVELI 504
F+G+G ++ ++ ++ A K + ++ + E + + +I R L H ++V
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 107
Query: 505 GYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEV--- 561
G+ ++ +V + C LL E HK+ R AL A YL+++
Sbjct: 108 GFFEDNDFVFVVLEL---CRRRSLL----ELHKR-------RKALTEPEARYYLRQIVLG 153
Query: 562 CE----PPIVHGNFKSSNILLDEKLIVRVSDCGLAPLL-FSGSTNELSEGLLTAHGSGAP 616
C+ ++H + K N+ L+E L V++ D GLA + + G E + L AP
Sbjct: 154 CQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG---ERKKVLCGTPNYIAP 210
Query: 617 EFESGS-YSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDID-ALSRM 674
E S +S + DV+S+G +M LL G+ P+ E S ++ R+ + ++ +
Sbjct: 211 EVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF-------ETSCLKETYLRIKKNEYSIPKH 263
Query: 675 VDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715
++P A +I + +Q +P RP ++E++ D
Sbjct: 264 INPVA------------ASLIQKMLQTDPTARPTINELLND 292
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 115/278 (41%), Gaps = 32/278 (11%)
Query: 440 NSFSEGNFIGEGLLGSVYKAELPGGK-LLAVKKLSNTVSQRQTDEEFLELASTI-SRLRH 497
F G +G+G G+VY A K +LA+K L ++ E L I S LRH
Sbjct: 5 EDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 64
Query: 498 GNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQY 557
NI+ L GY ++ + L+ +Y T++ L + KF A AL Y
Sbjct: 65 PNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSY 120
Query: 558 LQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPE 617
++H + K N+LL ++++D G + S L L PE
Sbjct: 121 CH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL----DYLPPE 173
Query: 618 FESGS-YSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVD 676
G + + D++SLGV+ E L G+ P+ E + + R+ ++ D
Sbjct: 174 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-------EANTYQETYKRISRVEFT--FPD 224
Query: 677 PSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQ 714
+GA D+ISR ++ P RP + E+++
Sbjct: 225 FVTEGA---------RDLISRLLKHNPSQRPMLREVLE 253
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 93/206 (45%), Gaps = 20/206 (9%)
Query: 448 IGEGLLGSVYKA-ELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGY 506
+G+G G V K + + AVK ++ ++ + L + +L H NI++L
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 507 CNEHGQHLLVYD-YGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPP 565
+ +V + Y G +++ K+FS + R+ + Y+ +
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEII-----KRKRFSEHDAARIIKQVFSGITYMHK---HN 141
Query: 566 IVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGST-----NELSEGLLTAHGSGAPEFES 620
IVH + K NILL+ K DC + + F ST ++ + + TA+ APE
Sbjct: 142 IVHRDLKPENILLESK----EKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYI-APEVLR 196
Query: 621 GSYSCQSDVYSLGVVMLELLTGRKPY 646
G+Y + DV+S GV++ LL+G P+
Sbjct: 197 GTYDEKCDVWSAGVILYILLSGTPPF 222
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 95/213 (44%), Gaps = 23/213 (10%)
Query: 440 NSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHG 498
+F + IGEG G VYKA G+++A+KK+ + S + L H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 499 NIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKF---SWNIRIRVALGAARAL 555
NIV+L+ + + LV++ H D++ KKF S I + L +
Sbjct: 66 NIVKLLDVIHTENKLYLVFE-----------HVDQDL-KKFMDASALTGIPLPLIKSYLF 113
Query: 556 QYLQ--EVCEP-PIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHG 612
Q LQ C ++H + K N+L++ + ++++D GLA F ++T
Sbjct: 114 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVVTL-W 171
Query: 613 SGAPEFESGS--YSCQSDVYSLGVVMLELLTGR 643
APE G YS D++SLG + E++T R
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 96/229 (41%), Gaps = 32/229 (13%)
Query: 432 IASLQQYTNSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELAST 491
+A+ ++T+ + +G+G V + K+ NT D + LE +
Sbjct: 23 MATCTRFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREAR 82
Query: 492 ISRL-RHGNIVELIGYCNEHGQHLLVYD-YGGNCTLHDLLHSDEEAHKKFSWNIRIRVAL 549
I RL +H NIV L +E G H LV+D G D++ + + S I
Sbjct: 83 ICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIH----- 137
Query: 550 GAARALQYLQEVCEPPIVHGNFKSSNILLDEKL---IVRVSDCGLAPLL---------FS 597
+ L+ + + + IVH + K N+LL K V+++D GLA + F+
Sbjct: 138 ---QILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFA 194
Query: 598 GSTNELSEGLLTAHGSGAPEFESGSYSCQSDVYSLGVVMLELLTGRKPY 646
G+ LS +L G P D+++ GV++ LL G P+
Sbjct: 195 GTPGYLSPEVLRKDPYGKP----------VDIWACGVILYILLVGYPPF 233
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 117/277 (42%), Gaps = 34/277 (12%)
Query: 442 FSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIV 501
F++ IG+G G V+K + + K+ + E+ + + +S+ +
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVT 84
Query: 502 ELIGYCNEHGQHLLVYDYGGNCTLHDLLHS---DEEAHKKFSWNIRIRVALGAARALQYL 558
+ G + + ++ +Y G + DLL + DE ++A L+ L
Sbjct: 85 KYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDE-----------FQIATMLKEILKGL 133
Query: 559 QEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPE- 617
+ +H + K++N+LL E+ V+++D G+A L T + APE
Sbjct: 134 DYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQL--TDTQIKRNTFVGTPFWMAPEV 191
Query: 618 FESGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDP 677
+ +Y ++D++SLG+ +EL G P P V + IP+ + P
Sbjct: 192 IQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMR----VLFLIPKNN---------PP 238
Query: 678 SLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQ 714
+L G + KS F D C+ +P FRP E+++
Sbjct: 239 TLVGDF-TKSFKEFID---ACLNKDPSFRPTAKELLK 271
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 128/292 (43%), Gaps = 41/292 (14%)
Query: 431 TIASLQQYTNSFSEGNFIGEGLLGSVYKA-ELPGGKLLAVKKLSNTVSQRQTDEEFLELA 489
+I S+ ++ IG+G G+VY A ++ G+ +A+++++ Q+Q +E +
Sbjct: 11 SIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN---LQQQPKKELI--I 65
Query: 490 STISRLRHGNIVELIGYCNEH--GQHL-LVYDYGGNCTLHDLLHS---DEEAHKKFSWNI 543
+ I +R ++ Y + + G L +V +Y +L D++ DE
Sbjct: 66 NEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEG--------- 116
Query: 544 RIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNEL 603
++A LQ L+ + ++H + KS NILL V+++D G + + ++
Sbjct: 117 --QIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQI-TPEQSKR 173
Query: 604 SEGLLTAHGSGAPEFESGSYSCQSDVYSLGVVMLELLTGRKPYDRSRP-RGEQSLVRWAI 662
S + T + +Y + D++SLG++ +E++ G PY P R +
Sbjct: 174 SXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGT 233
Query: 663 PRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQ 714
P L + + LS + F D ++RC++ + R E++Q
Sbjct: 234 PELQNPEKLSAI----------------FRDFLNRCLEMDVEKRGSAKELLQ 269
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 117/275 (42%), Gaps = 17/275 (6%)
Query: 440 NSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGN 499
+ F + + +G G G V+K L+ +KL + + + + +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 500 IVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQ 559
IV G G+ + ++ +L +L + + I +V++ + L YL+
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVL----KKAGRIPEQILGKVSIAVIKGLTYLR 121
Query: 560 EVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE 619
E + I+H + K SNIL++ + +++ D G++ L N + +PE
Sbjct: 122 E--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN----SFVGTRSYMSPERL 175
Query: 620 SGS-YSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPS 678
G+ YS QSD++S+G+ ++E+ GR P + E S AI L +D + P
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAK-EDSRPPMAIFEL--LDYIVNEPPPK 232
Query: 679 LDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIV 713
L + F D +++C+ P R + +++
Sbjct: 233 LPSGVFS---LEFQDFVNKCLIKNPAERADLKQLM 264
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 96/220 (43%), Gaps = 15/220 (6%)
Query: 432 IASLQQYT-NSFSEGNFIGEGLLGSVYKAELPGGK-LLAVKKLSNTVSQRQTDEEFLELA 489
+ S +Q+T F G +G+G G+VY A K +LA+K L T ++ E L
Sbjct: 3 LGSKRQWTLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRRE 62
Query: 490 STI-SRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVA 548
I S LRH NI+ L GY ++ + L+ +Y T++ L +K S R A
Sbjct: 63 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-------QKLSRFDEQRTA 115
Query: 549 LGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLL 608
L ++H + K N+LL ++++D G + S + L L
Sbjct: 116 TYITELANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDTLCGTL- 174
Query: 609 TAHGSGAPEFESGS-YSCQSDVYSLGVVMLELLTGRKPYD 647
PE G + + D++SLGV+ E L G P++
Sbjct: 175 ---DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFE 211
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 92/210 (43%), Gaps = 17/210 (8%)
Query: 440 NSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHG 498
+F + IGEG G VYKA G+++A+KK+ + S + L H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 499 NIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYL 558
NIV+L+ + + LV+++ L D + S I + L + Q L
Sbjct: 66 NIVKLLDVIHTENKLYLVFEF---------LSMDLKKFMDASALTGIPLPLIKSYLFQLL 116
Query: 559 Q--EVCEP-PIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGA 615
Q C ++H + K N+L++ + ++++D GLA F ++T A
Sbjct: 117 QGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVVTL-WYRA 174
Query: 616 PEFESGS--YSCQSDVYSLGVVMLELLTGR 643
PE G YS D++SLG + E++T R
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 103/215 (47%), Gaps = 37/215 (17%)
Query: 448 IGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGY- 506
+G+G G V++ L G+ +AVK S+ Q E E+ +T+ LRH NI+ I
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVKIFSSRDEQSWFRET--EIYNTVL-LRHDNILGFIASD 71
Query: 507 ---CNEHGQHLLVYDYGGNCTLHDLLHSDE-EAHKKFSWNIRIRVALGAARALQYLQ-EV 561
N Q L+ Y + +L+D L E H + +R+A+ AA L +L E+
Sbjct: 72 MTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPH------LALRLAVSAACGLAHLHVEI 125
Query: 562 C----EPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG--- 614
+P I H +FKS N+L+ L ++D GLA ++ S ++ L G G+
Sbjct: 126 FGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLA-VMHSQGSDYLDIGNNPRVGTKRYM 184
Query: 615 APE----------FESGSYSCQSDVYSLGVVMLEL 639
APE FES + +D+++ G+V+ E+
Sbjct: 185 APEVLDEQIRTDCFESYKW---TDIWAFGLVLWEI 216
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 91/222 (40%), Gaps = 29/222 (13%)
Query: 437 QYTNSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISR-L 495
++++++ +G+G V + L K+ NT D + LE + I R L
Sbjct: 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 62
Query: 496 RHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARAL 555
+H NIV L E H LV+D L + +I R A A
Sbjct: 63 QHPNIVRLHDSIQEESFHYLVFDLVTGGELFE--------------DIVAREFYSEADAS 108
Query: 556 QYLQEVCEPP-------IVHGNFKSSNILLDEK---LIVRVSDCGLAPLLFSGSTNELSE 605
+Q++ E IVH N K N+LL K V+++D GLA + +E
Sbjct: 109 HCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA---IEVNDSEAWH 165
Query: 606 GLLTAHGSGAPE-FESGSYSCQSDVYSLGVVMLELLTGRKPY 646
G G +PE + YS D+++ GV++ LL G P+
Sbjct: 166 GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF 207
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 96/218 (44%), Gaps = 24/218 (11%)
Query: 436 QQYTNSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRL 495
+Q +++ IG G G V++A+L +A+KK+ D+ F I R+
Sbjct: 36 EQREIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQ-------DKRFKNRELQIMRI 88
Query: 496 -RHGNIVELIGYCNEHGQHL------LVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVA 548
+H N+V+L + +G LV +Y H + I++ +
Sbjct: 89 VKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYM- 147
Query: 549 LGAARALQYLQEVCEPPIVHGNFKSSNILLDEKL-IVRVSDCGLAPLLFSGSTNELSEGL 607
R+L Y+ + I H + K N+LLD ++++ D G A +L +G N
Sbjct: 148 YQLLRSLAYIHSIG---ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNV---SX 201
Query: 608 LTAHGSGAPE--FESGSYSCQSDVYSLGVVMLELLTGR 643
+ + APE F + +Y+ D++S G VM EL+ G+
Sbjct: 202 ICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 120/298 (40%), Gaps = 41/298 (13%)
Query: 433 ASLQQYTNSFSEGNFIGEGLLGSVYK-AELPGGKLLAVKKLSNTVSQRQTDEEFLELAST 491
A+ +++ + + IG G+ V + G AVK + T ++R + E+ E+
Sbjct: 87 AAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVT-AERLSPEQLEEVREA 145
Query: 492 ISR----LR----HGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNI 543
R LR H +I+ LI LV+D L D L +K + +I
Sbjct: 146 TRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSI 205
Query: 544 RIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNEL 603
+R L A L IVH + K NILLD+ + +R+SD G + L G E
Sbjct: 206 -MRSLLEAVSFLHANN------IVHRDLKPENILLDDNMQIRLSDFGFSCHLEPG---EK 255
Query: 604 SEGLLTAHGSGAPEFESGS-------YSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQS 656
L G APE S Y + D+++ GV++ LL G P+ R Q
Sbjct: 256 LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRR----QI 311
Query: 657 LVRWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQ 714
L+ I ++ + P D S D+ISR +Q +P R + +Q
Sbjct: 312 LMLRMI-----MEGQYQFSSPEWDDRS-----STVKDLISRLLQVDPEARLTAEQALQ 359
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 91/222 (40%), Gaps = 29/222 (13%)
Query: 437 QYTNSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISR-L 495
++++++ +G+G V + L K+ NT D + LE + I R L
Sbjct: 2 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 61
Query: 496 RHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARAL 555
+H NIV L E H LV+D L + +I R A A
Sbjct: 62 QHPNIVRLHDSIQEESFHYLVFDLVTGGELFE--------------DIVAREFYSEADAS 107
Query: 556 QYLQEVCEPP-------IVHGNFKSSNILLDEK---LIVRVSDCGLAPLLFSGSTNELSE 605
+Q++ E IVH N K N+LL K V+++D GLA + +E
Sbjct: 108 HCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA---IEVNDSEAWH 164
Query: 606 GLLTAHGSGAPE-FESGSYSCQSDVYSLGVVMLELLTGRKPY 646
G G +PE + YS D+++ GV++ LL G P+
Sbjct: 165 GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF 206
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 91/222 (40%), Gaps = 29/222 (13%)
Query: 437 QYTNSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISR-L 495
++++++ +G+G V + L K+ NT D + LE + I R L
Sbjct: 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 62
Query: 496 RHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARAL 555
+H NIV L E H LV+D L + +I R A A
Sbjct: 63 QHPNIVRLHDSIQEESFHYLVFDLVTGGELFE--------------DIVAREFYSEADAS 108
Query: 556 QYLQEVCEPP-------IVHGNFKSSNILLDEK---LIVRVSDCGLAPLLFSGSTNELSE 605
+Q++ E IVH N K N+LL K V+++D GLA + +E
Sbjct: 109 HCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA---IEVNDSEAWH 165
Query: 606 GLLTAHGSGAPE-FESGSYSCQSDVYSLGVVMLELLTGRKPY 646
G G +PE + YS D+++ GV++ LL G P+
Sbjct: 166 GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF 207
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 95/217 (43%), Gaps = 26/217 (11%)
Query: 440 NSFSEGNFIGEGLLGSVYKAELPGGK-LLAVKKLSNTVSQRQTDEEFLELASTI-SRLRH 497
+ F G +G+G G+VY A K ++A+K L + +++ E L I S LRH
Sbjct: 15 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 74
Query: 498 GNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQY 557
NI+ + Y ++ + L+ ++ L+ L + H +F A AL Y
Sbjct: 75 PNILRMYNYFHDRKRIYLMLEFAPRGELYKEL----QKHGRFDEQRSATFMEELADALHY 130
Query: 558 LQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGL---APLL----FSGSTNELSEGLLTA 610
E ++H + K N+L+ K ++++D G AP L G+ + L ++
Sbjct: 131 CHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCGTLDYLPPEMI-- 185
Query: 611 HGSGAPEFESGSYSCQSDVYSLGVVMLELLTGRKPYD 647
E ++ + D++ GV+ E L G P+D
Sbjct: 186 --------EGKTHDEKVDLWCAGVLCYEFLVGMPPFD 214
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 95/217 (43%), Gaps = 26/217 (11%)
Query: 440 NSFSEGNFIGEGLLGSVYKAELPGGK-LLAVKKLSNTVSQRQTDEEFLELASTI-SRLRH 497
+ F G +G+G G+VY A K ++A+K L + +++ E L I S LRH
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 498 GNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQY 557
NI+ + Y ++ + L+ ++ L+ L + H +F A AL Y
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKEL----QKHGRFDEQRSATFMEELADALHY 129
Query: 558 LQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGL---APLL----FSGSTNELSEGLLTA 610
E ++H + K N+L+ K ++++D G AP L G+ + L ++
Sbjct: 130 CHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCGTLDYLPPEMI-- 184
Query: 611 HGSGAPEFESGSYSCQSDVYSLGVVMLELLTGRKPYD 647
E ++ + D++ GV+ E L G P+D
Sbjct: 185 --------EGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 113/286 (39%), Gaps = 41/286 (14%)
Query: 448 IGEGLLGSVYKAELPG------GKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIV 501
+G+G G VY+ G +A+K ++ S R+ E FL AS + ++V
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE-FLNEASVMKEFNCHHVV 91
Query: 502 ELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKF------SWNIRIRVALGAARAL 555
L+G ++ L++ + L L S A S + I++A A +
Sbjct: 92 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGM 151
Query: 556 QYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLF-SGSTNELSEGLLTAHGSG 614
YL VH + + N ++ E V++ D G+ ++ + + +GLL
Sbjct: 152 AYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 208
Query: 615 APEFESGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSR 673
+ G ++ SDV+S GVV+ E+ T +PY Q L + R
Sbjct: 209 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY--------QGLSNEQVLRF-------- 252
Query: 674 MVDPSLDGAYLAK---SLSRFADIISRCVQWEPGFRPPMSEIVQDL 716
++G L K +++ C Q+ P RP EI+ +
Sbjct: 253 ----VMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSI 294
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 127/281 (45%), Gaps = 48/281 (17%)
Query: 447 FIGEGLLGSVYK-AELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISR-LRHGNIVELI 504
F+G+G ++ ++ ++ A K + ++ + E + + +I R L H ++V
Sbjct: 22 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 81
Query: 505 GYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEV--- 561
G+ ++ +V + C LL E HK+ R AL A YL+++
Sbjct: 82 GFFEDNDFVFVVLEL---CRRRSLL----ELHKR-------RKALTEPEARYYLRQIVLG 127
Query: 562 CE----PPIVHGNFKSSNILLDEKLIVRVSDCGLAPLL-FSGSTNELSEGLLTAHGSGAP 616
C+ ++H + K N+ L+E L V++ D GLA + + G E + L AP
Sbjct: 128 CQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG---ERKKVLCGTPNYIAP 184
Query: 617 EFESGS-YSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDID-ALSRM 674
E S +S + DV+S+G +M LL G+ P+ E S ++ R+ + ++ +
Sbjct: 185 EVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF-------ETSCLKETYLRIKKNEYSIPKH 237
Query: 675 VDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715
++P A +I + +Q +P RP ++E++ D
Sbjct: 238 INPVA------------ASLIQKMLQTDPTARPTINELLND 266
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 92/210 (43%), Gaps = 17/210 (8%)
Query: 440 NSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHG 498
+F + IGEG G VYKA G+++A+KK+ + S + L H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 499 NIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYL 558
NIV+L+ + + LV+++ L D + S I + L + Q L
Sbjct: 64 NIVKLLDVIHTENKLYLVFEF---------LSMDLKKFMDASALTGIPLPLIKSYLFQLL 114
Query: 559 Q--EVCEP-PIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGA 615
Q C ++H + K N+L++ + ++++D GLA F ++T A
Sbjct: 115 QGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVVTL-WYRA 172
Query: 616 PEFESGS--YSCQSDVYSLGVVMLELLTGR 643
PE G YS D++SLG + E++T R
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 113/286 (39%), Gaps = 41/286 (14%)
Query: 448 IGEGLLGSVYKAELPG------GKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIV 501
+G+G G VY+ G +A+K ++ S R+ E FL AS + ++V
Sbjct: 23 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE-FLNEASVMKEFNCHHVV 81
Query: 502 ELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKF------SWNIRIRVALGAARAL 555
L+G ++ L++ + L L S A S + I++A A +
Sbjct: 82 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGM 141
Query: 556 QYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLF-SGSTNELSEGLLTAHGSG 614
YL VH + + N ++ E V++ D G+ ++ + + +GLL
Sbjct: 142 AYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 198
Query: 615 APEFESGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSR 673
+ G ++ SDV+S GVV+ E+ T +PY Q L + R
Sbjct: 199 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY--------QGLSNEQVLRF-------- 242
Query: 674 MVDPSLDGAYLAK---SLSRFADIISRCVQWEPGFRPPMSEIVQDL 716
++G L K +++ C Q+ P RP EI+ +
Sbjct: 243 ----VMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSI 284
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 92/210 (43%), Gaps = 17/210 (8%)
Query: 440 NSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHG 498
+F + IGEG G VYKA G+++A+KK+ + S + L H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 499 NIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYL 558
NIV+L+ + + LV+++ L D + S I + L + Q L
Sbjct: 66 NIVKLLDVIHTENKLYLVFEF---------LSMDLKDFMDASALTGIPLPLIKSYLFQLL 116
Query: 559 Q--EVCEP-PIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGA 615
Q C ++H + K N+L++ + ++++D GLA F ++T A
Sbjct: 117 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVVTL-WYRA 174
Query: 616 PEFESGS--YSCQSDVYSLGVVMLELLTGR 643
PE G YS D++SLG + E++T R
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 92/209 (44%), Gaps = 18/209 (8%)
Query: 445 GNFIGEGLLGSVY--KAELPGGKLLAVKKLSNTVSQRQTDE--EFLELASTISRLRHGNI 500
G+ +G G G V K EL G K+ AVK L N R D + + RH +I
Sbjct: 21 GDTLGVGTFGKVKVGKHELTGHKV-AVKIL-NRQKIRSLDVVGKIRREIQNLKLFRHPHI 78
Query: 501 VELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQE 560
++L + +V +Y L D + + +K S + ++ G +++
Sbjct: 79 IKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHM-- 136
Query: 561 VCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFES 620
+VH + K N+LLD + +++D GL+ ++ G S G + APE S
Sbjct: 137 -----VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSCG---SPNYAAPEVIS 188
Query: 621 GSYSC--QSDVYSLGVVMLELLTGRKPYD 647
G + D++S GV++ LL G P+D
Sbjct: 189 GRLYAGPEVDIWSSGVILYALLCGTLPFD 217
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 95/221 (42%), Gaps = 37/221 (16%)
Query: 437 QYTNSFSEGNFIGEGLLGSVYKAELP-----GGKLLAVKKLSNTVSQRQTDEEFLELAST 491
+Y + +GNF GSV G L+AVK+L ++ +Q D F
Sbjct: 10 KYISQLGKGNF------GSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRD--FQREIQI 61
Query: 492 ISRLRHGNIVELIG--YCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVAL 549
+ L IV+ G Y + LV +Y + L D L R R L
Sbjct: 62 LKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQ-------------RHRARL 108
Query: 550 GAARALQYLQEVCE-------PPIVHGNFKSSNILLDEKLIVRVSDCGLAPLL-FSGSTN 601
A+R L Y ++C+ VH + + NIL++ + V+++D GLA LL
Sbjct: 109 DASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXX 168
Query: 602 ELSEGLLTAHGSGAPEFESGS-YSCQSDVYSLGVVMLELLT 641
+ E + APE S + +S QSDV+S GVV+ EL T
Sbjct: 169 VVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 94/215 (43%), Gaps = 20/215 (9%)
Query: 440 NSFSEGNFIGEGLLGSVYKA-ELPGGKLLAVKKLSNTVSQRQTDEEFLELASTI-SRLRH 497
F G +GEG +V A EL + A+K L ++ ++ + SRL H
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 498 GNIVELIGYCNEHGQHLLV-YDYGGNCTLHDLLHS----DEEAHKKFSWNIRIRVALGAA 552
V+L +C + + L Y N L + DE + ++ I
Sbjct: 97 PFFVKLY-FCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI--------V 147
Query: 553 RALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHG 612
AL+YL I+H + K NILL+E + ++++D G A +L S + +
Sbjct: 148 SALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 204
Query: 613 SGAPEFESGSYSCQ-SDVYSLGVVMLELLTGRKPY 646
+PE + +C+ SD+++LG ++ +L+ G P+
Sbjct: 205 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 239
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 113/297 (38%), Gaps = 40/297 (13%)
Query: 440 NSFSEGNFIGEGLLGSVYKAELPG-GK-----LLAVKKLSNTVSQRQTDEEFLELASTIS 493
N+ G +G G G V +A G GK +AVK L +T + + EL
Sbjct: 31 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 90
Query: 494 RLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEA---------------HKK 538
+H NIV L+G C G L++ +Y L + L EA K+
Sbjct: 91 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKE 150
Query: 539 FSWNIRIRVALG-AARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS 597
+ +R L +++ Q + + +H + + N+LL + ++ D GLA + +
Sbjct: 151 DGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMN 210
Query: 598 GSTNELSEGLLTAHGSGAPE-FESGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQ 655
S + APE Y+ QSDV+S G+++ E+ + G PY
Sbjct: 211 DSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY--------- 261
Query: 656 SLVRWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEI 712
P + ++V A A + I+ C EP RP +I
Sbjct: 262 -------PGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQI 311
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 92/210 (43%), Gaps = 17/210 (8%)
Query: 440 NSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHG 498
+F + IGEG G VYKA G+++A+KK+ + S + L H
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 499 NIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYL 558
NIV+L+ + + LV+++ L D + S I + L + Q L
Sbjct: 65 NIVKLLDVIHTENKLYLVFEF---------LSMDLKDFMDASALTGIPLPLIKSYLFQLL 115
Query: 559 Q--EVCEP-PIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGA 615
Q C ++H + K N+L++ + ++++D GLA F ++T A
Sbjct: 116 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVVTL-WYRA 173
Query: 616 PEFESGS--YSCQSDVYSLGVVMLELLTGR 643
PE G YS D++SLG + E++T R
Sbjct: 174 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 92/216 (42%), Gaps = 43/216 (19%)
Query: 448 IGEGLLGSVYKAELP-----GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVE 502
+G+G GSV G L+AVK+L ++ +Q D F + L IV+
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRD--FQREIQILKALHSDFIVK 75
Query: 503 LIGYCNEHGQH--LLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQE 560
G G+ LV +Y + L D L R R L A+R L Y +
Sbjct: 76 YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQ-------------RHRARLDASRLLLYSSQ 122
Query: 561 VCE-------PPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGS 613
+C+ VH + + NIL++ + V+++D GLA LL L +
Sbjct: 123 ICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLL------PLDKDYYVVREP 176
Query: 614 G-------APEFESGS-YSCQSDVYSLGVVMLELLT 641
G APE S + +S QSDV+S GVV+ EL T
Sbjct: 177 GQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 95/220 (43%), Gaps = 15/220 (6%)
Query: 432 IASLQQYT-NSFSEGNFIGEGLLGSVYKAELPGGK-LLAVKKLSNTVSQRQTDEEFLELA 489
+ S +Q+T F G +G+G G+VY A K +LA+K L T ++ E L
Sbjct: 3 LGSKRQWTLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRRE 62
Query: 490 STI-SRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVA 548
I S LRH NI+ L GY ++ + L+ +Y T++ L +K S R A
Sbjct: 63 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-------QKLSRFDEQRTA 115
Query: 549 LGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLL 608
L ++H + K N+LL ++++D G + S L L
Sbjct: 116 TYITELANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRTTLCGTL- 174
Query: 609 TAHGSGAPEFESGS-YSCQSDVYSLGVVMLELLTGRKPYD 647
PE G + + D++SLGV+ E L G P++
Sbjct: 175 ---DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFE 211
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 127/292 (43%), Gaps = 41/292 (14%)
Query: 431 TIASLQQYTNSFSEGNFIGEGLLGSVYKA-ELPGGKLLAVKKLSNTVSQRQTDEEFLELA 489
+I S+ ++ IG+G G+VY A ++ G+ +A+++++ Q+Q +E +
Sbjct: 11 SIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN---LQQQPKKELI--I 65
Query: 490 STISRLRHGNIVELIGYCNEH--GQHL-LVYDYGGNCTLHDLLHS---DEEAHKKFSWNI 543
+ I +R ++ Y + + G L +V +Y +L D++ DE
Sbjct: 66 NEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEG--------- 116
Query: 544 RIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNEL 603
++A LQ L+ + ++H + KS NILL V+++D G + + ++
Sbjct: 117 --QIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQI-TPEQSKR 173
Query: 604 SEGLLTAHGSGAPEFESGSYSCQSDVYSLGVVMLELLTGRKPYDRSRP-RGEQSLVRWAI 662
S + T + +Y + D++SLG++ +E++ G PY P R +
Sbjct: 174 STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGT 233
Query: 663 PRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQ 714
P L + + LS + F D ++RC+ + R E++Q
Sbjct: 234 PELQNPEKLSAI----------------FRDFLNRCLDMDVEKRGSAKELLQ 269
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 84/182 (46%), Gaps = 19/182 (10%)
Query: 472 LSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHS 531
L N + +E L A+ + +L + IV +IG C E +LV + L+ L
Sbjct: 46 LKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ 104
Query: 532 DEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGL 591
+ K + +V++G ++YL+ E VH + + N+LL + ++SD GL
Sbjct: 105 NRHVKDKNIIELVHQVSMG----MKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGL 157
Query: 592 APLLFSGSTNELSEGLLTAHGSG-----APE-FESGSYSCQSDVYSLGVVMLELLT-GRK 644
+ L + ++ HG APE +S +SDV+S GV+M E + G+K
Sbjct: 158 SKALRADENXYKAQ----THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQK 213
Query: 645 PY 646
PY
Sbjct: 214 PY 215
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 115/276 (41%), Gaps = 32/276 (11%)
Query: 442 FSEGNFIGEGLLGSVYKAELPGGK-LLAVKKLSNTVSQRQTDEEFLELASTI-SRLRHGN 499
F G +G+G G+VY A K +LA+K L ++ E L I S LRH N
Sbjct: 12 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 71
Query: 500 IVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQ 559
I+ L GY ++ + L+ +Y T++ L + KF A AL Y
Sbjct: 72 ILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCH 127
Query: 560 EVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE 619
++H + K N+LL +++++ G + S L L PE
Sbjct: 128 ---SKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTL----DYLPPEMI 180
Query: 620 SGS-YSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPS 678
G + + D++SLGV+ E L G+ P+ E + + R+ ++ D
Sbjct: 181 EGRMHDEKVDLWSLGVLCYEFLVGKPPF-------EANTYQETYKRISRVEFT--FPDFV 231
Query: 679 LDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQ 714
+GA D+ISR ++ P RP + E+++
Sbjct: 232 TEGA---------RDLISRLLKHNPSQRPMLREVLE 258
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 115/276 (41%), Gaps = 32/276 (11%)
Query: 442 FSEGNFIGEGLLGSVYKAELPGGK-LLAVKKLSNTVSQRQTDEEFLELASTI-SRLRHGN 499
F G +G+G G+VY A K +LA+K L ++ E L I S LRH N
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 500 IVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQ 559
I+ L GY ++ + L+ +Y T++ L + KF A AL Y
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCH 128
Query: 560 EVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE 619
++H + K N+LL +++++ G + S L L PE
Sbjct: 129 ---SKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTL----DYLPPEMI 181
Query: 620 SGS-YSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPS 678
G + + D++SLGV+ E L G+ P+ E + + R+ ++ D
Sbjct: 182 EGRMHDEKVDLWSLGVLCYEFLVGKPPF-------EANTYQETYKRISRVEFT--FPDFV 232
Query: 679 LDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQ 714
+GA D+ISR ++ P RP + E+++
Sbjct: 233 TEGA---------RDLISRLLKHNPSQRPMLREVLE 259
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 91/214 (42%), Gaps = 18/214 (8%)
Query: 440 NSFSEGNFIGEGLLGSVYKA-ELPGGKLLAVKKLSNTVSQRQTDEEFLELA-STISRLRH 497
F G +GEG +V A EL + A+K L ++ ++ +SRL H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 498 GNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHS----DEEAHKKFSWNIRIRVALGAAR 553
V+L + + Y N L + DE + ++ I
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI--------VS 141
Query: 554 ALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGS 613
AL+YL I+H + K NILL+E + ++++D G A +L S + +
Sbjct: 142 ALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQY 198
Query: 614 GAPEFESGSYSCQ-SDVYSLGVVMLELLTGRKPY 646
+PE + +C+ SD+++LG ++ +L+ G P+
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 91/214 (42%), Gaps = 18/214 (8%)
Query: 440 NSFSEGNFIGEGLLGSVYKA-ELPGGKLLAVKKLSNTVSQRQTDEEFLELASTI-SRLRH 497
F G +GEG +V A EL + A+K L ++ ++ + SRL H
Sbjct: 10 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 69
Query: 498 GNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHS----DEEAHKKFSWNIRIRVALGAAR 553
V+L + + Y N L + DE + ++ I
Sbjct: 70 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI--------VS 121
Query: 554 ALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGS 613
AL+YL I+H + K NILL+E + ++++D G A +L S + +
Sbjct: 122 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 178
Query: 614 GAPEFESGSYSCQ-SDVYSLGVVMLELLTGRKPY 646
+PE + +C+ SD+++LG ++ +L+ G P+
Sbjct: 179 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 212
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 85/195 (43%), Gaps = 38/195 (19%)
Query: 464 GKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQH--LLVYDYGG 521
G L+AVK+L ++ +Q D F + L IV+ G G+ LV +Y
Sbjct: 40 GALVAVKQLQHSGPDQQRD--FQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLP 97
Query: 522 NCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCE-------PPIVHGNFKSS 574
+ L D L R R L A+R L Y ++C+ VH + +
Sbjct: 98 SGCLRDFLQ-------------RHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAAR 144
Query: 575 NILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG-------APEFESGS-YSCQ 626
NIL++ + V+++D GLA LL L + G APE S + +S Q
Sbjct: 145 NILVESEAHVKIADFGLAKLL------PLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQ 198
Query: 627 SDVYSLGVVMLELLT 641
SDV+S GVV+ EL T
Sbjct: 199 SDVWSFGVVLYELFT 213
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 92/216 (42%), Gaps = 43/216 (19%)
Query: 448 IGEGLLGSVYKAELP-----GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVE 502
+G+G GSV G L+AVK+L ++ +Q D F + L IV+
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRD--FQREIQILKALHSDFIVK 88
Query: 503 LIGYCNEHGQH--LLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQE 560
G G+ LV +Y + L D L R R L A+R L Y +
Sbjct: 89 YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQ-------------RHRARLDASRLLLYSSQ 135
Query: 561 VCE-------PPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGS 613
+C+ VH + + NIL++ + V+++D GLA LL L +
Sbjct: 136 ICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLL------PLDKDYYVVREP 189
Query: 614 G-------APEFESGS-YSCQSDVYSLGVVMLELLT 641
G APE S + +S QSDV+S GVV+ EL T
Sbjct: 190 GQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 84/182 (46%), Gaps = 19/182 (10%)
Query: 472 LSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHS 531
L N + +E L A+ + +L + IV +IG C E +LV + L+ L
Sbjct: 404 LKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ 462
Query: 532 DEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGL 591
+ K + +V++G ++YL+E VH + + N+LL + ++SD GL
Sbjct: 463 NRHVKDKNIIELVHQVSMG----MKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGL 515
Query: 592 APLLFSGSTNELSEGLLTAHGSG-----APE-FESGSYSCQSDVYSLGVVMLELLT-GRK 644
+ L + ++ HG APE +S +SDV+S GV+M E + G+K
Sbjct: 516 SKALRADENYYKAQ----THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQK 571
Query: 645 PY 646
PY
Sbjct: 572 PY 573
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 84/182 (46%), Gaps = 19/182 (10%)
Query: 472 LSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHS 531
L N + +E L A+ + +L + IV +IG C E +LV + L+ L
Sbjct: 46 LKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ 104
Query: 532 DEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGL 591
+ K + +V++G ++YL+ E VH + + N+LL + ++SD GL
Sbjct: 105 NRHVKDKNIIELVHQVSMG----MKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGL 157
Query: 592 APLLFSGSTNELSEGLLTAHGSG-----APE-FESGSYSCQSDVYSLGVVMLELLT-GRK 644
+ L + ++ HG APE +S +SDV+S GV+M E + G+K
Sbjct: 158 SKALRADENYYKAQ----THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQK 213
Query: 645 PY 646
PY
Sbjct: 214 PY 215
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 84/182 (46%), Gaps = 19/182 (10%)
Query: 472 LSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHS 531
L N + +E L A+ + +L + IV +IG C E +LV + L+ L
Sbjct: 60 LKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ 118
Query: 532 DEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGL 591
+ K + +V++G ++YL+ E VH + + N+LL + ++SD GL
Sbjct: 119 NRHVKDKNIIELVHQVSMG----MKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGL 171
Query: 592 APLLFSGSTNELSEGLLTAHGSG-----APE-FESGSYSCQSDVYSLGVVMLELLT-GRK 644
+ L + ++ HG APE +S +SDV+S GV+M E + G+K
Sbjct: 172 SKALRADENYYKAQ----THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQK 227
Query: 645 PY 646
PY
Sbjct: 228 PY 229
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 84/182 (46%), Gaps = 19/182 (10%)
Query: 472 LSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHS 531
L N + +E L A+ + +L + IV +IG C E +LV + L+ L
Sbjct: 62 LKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ 120
Query: 532 DEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGL 591
+ K + +V++G ++YL+ E VH + + N+LL + ++SD GL
Sbjct: 121 NRHVKDKNIIELVHQVSMG----MKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGL 173
Query: 592 APLLFSGSTNELSEGLLTAHGSG-----APE-FESGSYSCQSDVYSLGVVMLELLT-GRK 644
+ L + ++ HG APE +S +SDV+S GV+M E + G+K
Sbjct: 174 SKALRADENYYKAQ----THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQK 229
Query: 645 PY 646
PY
Sbjct: 230 PY 231
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 84/182 (46%), Gaps = 19/182 (10%)
Query: 472 LSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHS 531
L N + +E L A+ + +L + IV +IG C E +LV + L+ L
Sbjct: 62 LKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ 120
Query: 532 DEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGL 591
+ K + +V++G ++YL+ E VH + + N+LL + ++SD GL
Sbjct: 121 NRHVKDKNIIELVHQVSMG----MKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGL 173
Query: 592 APLLFSGSTNELSEGLLTAHGSG-----APE-FESGSYSCQSDVYSLGVVMLELLT-GRK 644
+ L + ++ HG APE +S +SDV+S GV+M E + G+K
Sbjct: 174 SKALRADENYYKAQ----THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQK 229
Query: 645 PY 646
PY
Sbjct: 230 PY 231
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 113/286 (39%), Gaps = 41/286 (14%)
Query: 448 IGEGLLGSVYKAELPG------GKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIV 501
+G+G G VY+ G +A+K ++ S R+ E FL AS + ++V
Sbjct: 24 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE-FLNEASVMKEFNCHHVV 82
Query: 502 ELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKF------SWNIRIRVALGAARAL 555
L+G ++ L++ + L L S + S + I++A A +
Sbjct: 83 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 142
Query: 556 QYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLF-SGSTNELSEGLLTAHGSG 614
YL VH + + N ++ E V++ D G+ ++ + + +GLL
Sbjct: 143 AYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 199
Query: 615 APEFESGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSR 673
+ G ++ SDV+S GVV+ E+ T +PY Q L + R
Sbjct: 200 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY--------QGLSNEQVLRF-------- 243
Query: 674 MVDPSLDGAYLAK---SLSRFADIISRCVQWEPGFRPPMSEIVQDL 716
++G L K +++ C Q+ P RP EI+ +
Sbjct: 244 ----VMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSI 285
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 84/182 (46%), Gaps = 19/182 (10%)
Query: 472 LSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHS 531
L N + +E L A+ + +L + IV +IG C E +LV + L+ L
Sbjct: 42 LKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ 100
Query: 532 DEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGL 591
+ K + +V++G ++YL+ E VH + + N+LL + ++SD GL
Sbjct: 101 NRHVKDKNIIELVHQVSMG----MKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGL 153
Query: 592 APLLFSGSTNELSEGLLTAHGSG-----APE-FESGSYSCQSDVYSLGVVMLELLT-GRK 644
+ L + ++ HG APE +S +SDV+S GV+M E + G+K
Sbjct: 154 SKALRADENYYKAQ----THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQK 209
Query: 645 PY 646
PY
Sbjct: 210 PY 211
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 84/182 (46%), Gaps = 19/182 (10%)
Query: 472 LSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHS 531
L N + +E L A+ + +L + IV +IG C E +LV + L+ L
Sbjct: 52 LKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ 110
Query: 532 DEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGL 591
+ K + +V++G ++YL+ E VH + + N+LL + ++SD GL
Sbjct: 111 NRHVKDKNIIELVHQVSMG----MKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGL 163
Query: 592 APLLFSGSTNELSEGLLTAHGSG-----APE-FESGSYSCQSDVYSLGVVMLELLT-GRK 644
+ L + ++ HG APE +S +SDV+S GV+M E + G+K
Sbjct: 164 SKALRADENYYKAQ----THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQK 219
Query: 645 PY 646
PY
Sbjct: 220 PY 221
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 91/214 (42%), Gaps = 18/214 (8%)
Query: 440 NSFSEGNFIGEGLLGSVYKA-ELPGGKLLAVKKLSNTVSQRQTDEEFLELASTI-SRLRH 497
F G +GEG +V A EL + A+K L ++ ++ + SRL H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 498 GNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHS----DEEAHKKFSWNIRIRVALGAAR 553
V+L + + Y N L + DE + ++ I
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI--------VS 144
Query: 554 ALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGS 613
AL+YL I+H + K NILL+E + ++++D G A +L S + +
Sbjct: 145 ALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQY 201
Query: 614 GAPEFESGSYSCQ-SDVYSLGVVMLELLTGRKPY 646
+PE + +C+ SD+++LG ++ +L+ G P+
Sbjct: 202 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 235
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 84/182 (46%), Gaps = 19/182 (10%)
Query: 472 LSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHS 531
L N + +E L A+ + +L + IV +IG C E +LV + L+ L
Sbjct: 40 LKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ 98
Query: 532 DEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGL 591
+ K + +V++G ++YL+ E VH + + N+LL + ++SD GL
Sbjct: 99 NRHVKDKNIIELVHQVSMG----MKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGL 151
Query: 592 APLLFSGSTNELSEGLLTAHGSG-----APE-FESGSYSCQSDVYSLGVVMLELLT-GRK 644
+ L + ++ HG APE +S +SDV+S GV+M E + G+K
Sbjct: 152 SKALRADENYYKAQ----THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQK 207
Query: 645 PY 646
PY
Sbjct: 208 PY 209
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 84/182 (46%), Gaps = 19/182 (10%)
Query: 472 LSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHS 531
L N + +E L A+ + +L + IV +IG C E +LV + L+ L
Sbjct: 405 LKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ 463
Query: 532 DEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGL 591
+ K + +V++G ++YL+E VH + + N+LL + ++SD GL
Sbjct: 464 NRHVKDKNIIELVHQVSMG----MKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGL 516
Query: 592 APLLFSGSTNELSEGLLTAHGSG-----APE-FESGSYSCQSDVYSLGVVMLELLT-GRK 644
+ L + ++ HG APE +S +SDV+S GV+M E + G+K
Sbjct: 517 SKALRADENYYKAQ----THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQK 572
Query: 645 PY 646
PY
Sbjct: 573 PY 574
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 113/286 (39%), Gaps = 41/286 (14%)
Query: 448 IGEGLLGSVYKAELPG------GKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIV 501
+G+G G VY+ G +A+K ++ S R+ E FL AS + ++V
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE-FLNEASVMKEFNCHHVV 84
Query: 502 ELIGYCNEHGQHLLVYDYGGNCTLHDLLHS------DEEAHKKFSWNIRIRVALGAARAL 555
L+G ++ L++ + L L S + S + I++A A +
Sbjct: 85 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 144
Query: 556 QYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLF-SGSTNELSEGLLTAHGSG 614
YL VH + + N ++ E V++ D G+ ++ + + +GLL
Sbjct: 145 AYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 201
Query: 615 APEFESGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSR 673
+ G ++ SDV+S GVV+ E+ T +PY Q L + R
Sbjct: 202 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY--------QGLSNEQVLRF-------- 245
Query: 674 MVDPSLDGAYLAK---SLSRFADIISRCVQWEPGFRPPMSEIVQDL 716
++G L K +++ C Q+ P RP EI+ +
Sbjct: 246 ----VMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSI 287
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 113/286 (39%), Gaps = 41/286 (14%)
Query: 448 IGEGLLGSVYKAELPG------GKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIV 501
+G+G G VY+ G +A+K ++ S R+ E FL AS + ++V
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE-FLNEASVMKEFNCHHVV 78
Query: 502 ELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKF------SWNIRIRVALGAARAL 555
L+G ++ L++ + L L S + S + I++A A +
Sbjct: 79 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 138
Query: 556 QYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLF-SGSTNELSEGLLTAHGSG 614
YL VH + + N ++ E V++ D G+ ++ + + +GLL
Sbjct: 139 AYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 195
Query: 615 APEFESGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSR 673
+ G ++ SDV+S GVV+ E+ T +PY Q L + R
Sbjct: 196 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY--------QGLSNEQVLRF-------- 239
Query: 674 MVDPSLDGAYLAK---SLSRFADIISRCVQWEPGFRPPMSEIVQDL 716
++G L K +++ C Q+ P RP EI+ +
Sbjct: 240 ----VMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSI 281
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 100/241 (41%), Gaps = 47/241 (19%)
Query: 439 TNSFSEGNFIGEGLLGSVYKA-ELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRL-R 496
T+ + +G+G V + ++P G+ A K + NT D + LE + I RL +
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAK-IINTKKLSARDHQKLEREARICRLLK 61
Query: 497 HGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQ 556
H NIV L +E G H LV+D L + +I R A A
Sbjct: 62 HPNIVRLHDSISEEGFHYLVFDLVTGGELFE--------------DIVAREYYSEADASH 107
Query: 557 YLQEVCEPP-------IVHGNFKSSNILLDEK---LIVRVSDCGLAPLL---------FS 597
+Q++ E IVH + K N+LL K V+++D GLA + F+
Sbjct: 108 CIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFA 167
Query: 598 GSTNELSEGLLTAHGSGAPEFESGSYSCQSDVYSLGVVMLELLTGRKPY-DRSRPRGEQS 656
G+ LS +L G P D+++ GV++ LL G P+ D + R Q
Sbjct: 168 GTPGYLSPEVLRKDPYGKP----------VDMWACGVILYILLVGYPPFWDEDQHRLYQQ 217
Query: 657 L 657
+
Sbjct: 218 I 218
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 91/214 (42%), Gaps = 18/214 (8%)
Query: 440 NSFSEGNFIGEGLLGSVYKA-ELPGGKLLAVKKLSNTVSQRQTDEEFLELASTI-SRLRH 497
F G +GEG +V A EL + A+K L ++ ++ + SRL H
Sbjct: 9 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 68
Query: 498 GNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHS----DEEAHKKFSWNIRIRVALGAAR 553
V+L + + Y N L + DE + ++ I
Sbjct: 69 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI--------VS 120
Query: 554 ALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGS 613
AL+YL I+H + K NILL+E + ++++D G A +L S + +
Sbjct: 121 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 177
Query: 614 GAPEFESGSYSCQ-SDVYSLGVVMLELLTGRKPY 646
+PE + +C+ SD+++LG ++ +L+ G P+
Sbjct: 178 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 211
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 100/241 (41%), Gaps = 47/241 (19%)
Query: 439 TNSFSEGNFIGEGLLGSVYKA-ELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRL-R 496
T+ + +G+G V + ++P G+ A K + NT D + LE + I RL +
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAK-IINTKKLSARDHQKLEREARICRLLK 61
Query: 497 HGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQ 556
H NIV L +E G H LV+D L + +I R A A
Sbjct: 62 HPNIVRLHDSISEEGFHYLVFDLVTGGELFE--------------DIVAREYYSEADASH 107
Query: 557 YLQEVCEPP-------IVHGNFKSSNILLDEK---LIVRVSDCGLAPLL---------FS 597
+Q++ E IVH + K N+LL K V+++D GLA + F+
Sbjct: 108 CIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFA 167
Query: 598 GSTNELSEGLLTAHGSGAPEFESGSYSCQSDVYSLGVVMLELLTGRKPY-DRSRPRGEQS 656
G+ LS +L G P D+++ GV++ LL G P+ D + R Q
Sbjct: 168 GTPGYLSPEVLRKDPYGKP----------VDMWACGVILYILLVGYPPFWDEDQHRLYQQ 217
Query: 657 L 657
+
Sbjct: 218 I 218
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 113/286 (39%), Gaps = 41/286 (14%)
Query: 448 IGEGLLGSVYKAELPG------GKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIV 501
+G+G G VY+ G +A+K ++ S R+ E FL AS + ++V
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE-FLNEASVMKEFNCHHVV 85
Query: 502 ELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKF------SWNIRIRVALGAARAL 555
L+G ++ L++ + L L S + S + I++A A +
Sbjct: 86 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 145
Query: 556 QYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLF-SGSTNELSEGLLTAHGSG 614
YL VH + + N ++ E V++ D G+ ++ + + +GLL
Sbjct: 146 AYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 202
Query: 615 APEFESGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSR 673
+ G ++ SDV+S GVV+ E+ T +PY Q L + R
Sbjct: 203 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY--------QGLSNEQVLRF-------- 246
Query: 674 MVDPSLDGAYLAK---SLSRFADIISRCVQWEPGFRPPMSEIVQDL 716
++G L K +++ C Q+ P RP EI+ +
Sbjct: 247 ----VMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSI 288
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 91/214 (42%), Gaps = 18/214 (8%)
Query: 440 NSFSEGNFIGEGLLGSVYKA-ELPGGKLLAVKKLSNTVSQRQTDEEFLELASTI-SRLRH 497
F G +GEG +V A EL + A+K L ++ ++ + SRL H
Sbjct: 7 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 66
Query: 498 GNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHS----DEEAHKKFSWNIRIRVALGAAR 553
V+L + + Y N L + DE + ++ I
Sbjct: 67 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI--------VS 118
Query: 554 ALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGS 613
AL+YL I+H + K NILL+E + ++++D G A +L S + +
Sbjct: 119 ALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 175
Query: 614 GAPEFESGSYSCQ-SDVYSLGVVMLELLTGRKPY 646
+PE + +C+ SD+++LG ++ +L+ G P+
Sbjct: 176 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 209
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 91/210 (43%), Gaps = 32/210 (15%)
Query: 448 IGEGLLGSV----YKAELPG-GKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVE 502
+GEG G V Y G G+++AVK L Q + + + L H +I++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGP-QHRSGWKQEIDILRTLYHEHIIK 80
Query: 503 LIGYCNEHGQH--LLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQE 560
G C + G+ LV +Y +L D L R ++G A+ L + Q+
Sbjct: 81 YKGCCEDQGEKSLQLVMEYVPLGSLRDYL---------------PRHSIGLAQLLLFAQQ 125
Query: 561 VCE-------PPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSG-STNELSEGLLTAHG 612
+CE +H N + N+LLD +V++ D GLA + G + E +
Sbjct: 126 ICEGMAYLHSQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVF 185
Query: 613 SGAPE-FESGSYSCQSDVYSLGVVMLELLT 641
APE + + SDV+S GV + ELLT
Sbjct: 186 WYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 114/286 (39%), Gaps = 41/286 (14%)
Query: 448 IGEGLLGSVYKAELPG------GKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIV 501
+G+G G VY+ G +A+K ++ S R+ E FL AS + ++V
Sbjct: 55 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE-FLNEASVMKEFNCHHVV 113
Query: 502 ELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKF------SWNIRIRVALGAARAL 555
L+G ++ L++ + L L S + S + I++A A +
Sbjct: 114 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 173
Query: 556 QYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLF-SGSTNELSEGLLTAHGSG 614
YL VH + + N ++ E V++ D G+ ++ + + +GLL
Sbjct: 174 AYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 230
Query: 615 APEFESGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSR 673
+ G ++ SDV+S GVV+ E+ T +PY Q L + R
Sbjct: 231 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY--------QGLSNEQVLRF-------- 274
Query: 674 MVDPSLDGAYLAKSLS---RFADIISRCVQWEPGFRPPMSEIVQDL 716
++G L K + +++ C Q+ P RP EI+ +
Sbjct: 275 ----VMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSI 316
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 115/286 (40%), Gaps = 41/286 (14%)
Query: 448 IGEGLLGSVYKAELPG------GKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIV 501
+G+G G VY+ G +A+K ++ S R+ E FL AS + ++V
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE-FLNEASVMKEFNCHHVV 84
Query: 502 ELIGYCNEHGQHLLVYDYGGNCTLHDLLHS---DEEAHKKF---SWNIRIRVALGAARAL 555
L+G ++ L++ + L L S + E + S + I++A A +
Sbjct: 85 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 144
Query: 556 QYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLF-SGSTNELSEGLLTAHGSG 614
YL VH + + N ++ E V++ D G+ ++ + + +GLL
Sbjct: 145 AYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 201
Query: 615 APEFESGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSR 673
+ G ++ SDV+S GVV+ E+ T +PY Q L + R
Sbjct: 202 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY--------QGLSNEQVLRF-------- 245
Query: 674 MVDPSLDGAYLAK---SLSRFADIISRCVQWEPGFRPPMSEIVQDL 716
++G L K +++ C Q+ P RP EI+ +
Sbjct: 246 ----VMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSI 287
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 91/210 (43%), Gaps = 32/210 (15%)
Query: 448 IGEGLLGSV----YKAELPG-GKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVE 502
+GEG G V Y G G+++AVK L + E+ + L H +I++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEI-DILRTLYHEHIIK 80
Query: 503 LIGYCNEHGQH--LLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQE 560
G C + G+ LV +Y +L D L R ++G A+ L + Q+
Sbjct: 81 YKGCCEDQGEKSLQLVMEYVPLGSLRDYL---------------PRHSIGLAQLLLFAQQ 125
Query: 561 VCE-------PPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSG-STNELSEGLLTAHG 612
+CE +H N + N+LLD +V++ D GLA + G + E +
Sbjct: 126 ICEGMAYLHAQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVF 185
Query: 613 SGAPE-FESGSYSCQSDVYSLGVVMLELLT 641
APE + + SDV+S GV + ELLT
Sbjct: 186 WYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 58/109 (53%), Gaps = 11/109 (10%)
Query: 552 ARALQYLQEVC-------EPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELS 604
ARA+ Y E+C IV+ + K NILLD+ +R+SD GLA + G T
Sbjct: 286 ARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT---I 342
Query: 605 EGLLTAHGSGAPE-FESGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPR 652
+G + G APE ++ Y+ D ++LG ++ E++ G+ P+ + + +
Sbjct: 343 KGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKK 391
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 114/286 (39%), Gaps = 41/286 (14%)
Query: 448 IGEGLLGSVYKAELPG------GKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIV 501
+G+G G VY+ G +A+K ++ S R+ E FL AS + ++V
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE-FLNEASVMKEFNCHHVV 91
Query: 502 ELIGYCNEHGQHLLVYDYGGNCTLHDLLHS------DEEAHKKFSWNIRIRVALGAARAL 555
L+G ++ L++ + L L S + S + I++A A +
Sbjct: 92 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 151
Query: 556 QYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLF-SGSTNELSEGLLTAHGSG 614
YL VH + + N ++ E V++ D G+ ++ + + +GLL
Sbjct: 152 AYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 208
Query: 615 APEFESGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSR 673
+ G ++ SDV+S GVV+ E+ T +PY Q L + R
Sbjct: 209 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY--------QGLSNEQVLRF-------- 252
Query: 674 MVDPSLDGAYLAKSLS---RFADIISRCVQWEPGFRPPMSEIVQDL 716
++G L K + +++ C Q+ P RP EI+ +
Sbjct: 253 ----VMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSI 294
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 121/274 (44%), Gaps = 32/274 (11%)
Query: 448 IGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELI-GY 506
+G+G G VYKA+ +LA K+ +T S+ + ++ +E+ ++ H NIV+L+ +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEI-DILASCDHPNIVKLLDAF 103
Query: 507 CNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPI 566
E+ +L+ G +L E + + + V AL YL + I
Sbjct: 104 YYENNLWILIEFCAGGAVDAVML----ELERPLTESQIQVVCKQTLDALNYLH---DNKI 156
Query: 567 VHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEF------ES 620
+H + K+ NIL ++++D G++ + T + + + APE +
Sbjct: 157 IHRDLKAGNILFTLDGDIKLADFGVSAK--NTRTIQRRDSFIGTPYWMAPEVVMCETSKD 214
Query: 621 GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLD 680
Y ++DV+SLG+ ++E+ P+ P + + +++ P+L
Sbjct: 215 RPYDYKADVWSLGITLIEMAEIEPPHHELNP-------------MRVLLKIAKSEPPTL- 260
Query: 681 GAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQ 714
A ++ S F D + +C++ R S+++Q
Sbjct: 261 -AQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQ 293
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 91/214 (42%), Gaps = 18/214 (8%)
Query: 440 NSFSEGNFIGEGLLGSVYKA-ELPGGKLLAVKKLSNTVSQRQTDEEFLELASTI-SRLRH 497
F G +GEG +V A EL + A+K L ++ ++ + SRL H
Sbjct: 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 67
Query: 498 GNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHS----DEEAHKKFSWNIRIRVALGAAR 553
V+L + + Y N L + DE + ++ I
Sbjct: 68 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI--------VS 119
Query: 554 ALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGS 613
AL+YL I+H + K NILL+E + ++++D G A +L S + +
Sbjct: 120 ALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 176
Query: 614 GAPEFESGSYSCQ-SDVYSLGVVMLELLTGRKPY 646
+PE + +C+ SD+++LG ++ +L+ G P+
Sbjct: 177 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 210
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 89/213 (41%), Gaps = 18/213 (8%)
Query: 448 IGEGLLGSVYKAEL------PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIV 501
+G G G VY+ ++ P +AVK L S+ Q + +FL A IS+L H NIV
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSE-QDELDFLMEALIISKLNHQNIV 97
Query: 502 ELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKK---FSWNIRIRVALGAARALQYL 558
IG + ++ + L L + + + VA A QYL
Sbjct: 98 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 157
Query: 559 QEVCEPPIVHGNFKSSNILLD---EKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGA 615
+E +H + + N LL + ++ D G+A ++ S +
Sbjct: 158 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 214
Query: 616 PE-FESGSYSCQSDVYSLGVVMLELLT-GRKPY 646
PE F G ++ ++D +S GV++ E+ + G PY
Sbjct: 215 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPY 247
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 91/214 (42%), Gaps = 18/214 (8%)
Query: 440 NSFSEGNFIGEGLLGSVYKA-ELPGGKLLAVKKLSNTVSQRQTDEEFLELA-STISRLRH 497
F G +GEG +V A EL + A+K L ++ ++ +SRL H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 498 GNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHS----DEEAHKKFSWNIRIRVALGAAR 553
V+L + + Y N L + DE + ++ I
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI--------VS 143
Query: 554 ALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGS 613
AL+YL I+H + K NILL+E + ++++D G A +L S + +
Sbjct: 144 ALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 614 GAPEFESGSYSCQ-SDVYSLGVVMLELLTGRKPY 646
+PE + +C+ SD+++LG ++ +L+ G P+
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 91/214 (42%), Gaps = 18/214 (8%)
Query: 440 NSFSEGNFIGEGLLGSVYKA-ELPGGKLLAVKKLSNTVSQRQTDEEFLELA-STISRLRH 497
F G +GEG +V A EL + A+K L ++ ++ +SRL H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 498 GNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHS----DEEAHKKFSWNIRIRVALGAAR 553
V+L + + Y N L + DE + ++ I
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI--------VS 144
Query: 554 ALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGS 613
AL+YL I+H + K NILL+E + ++++D G A +L S + +
Sbjct: 145 ALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 201
Query: 614 GAPEFESGSYSCQ-SDVYSLGVVMLELLTGRKPY 646
+PE + +C+ SD+++LG ++ +L+ G P+
Sbjct: 202 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 235
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 91/214 (42%), Gaps = 18/214 (8%)
Query: 440 NSFSEGNFIGEGLLGSVYKA-ELPGGKLLAVKKLSNTVSQRQTDEEFLELASTI-SRLRH 497
F G +GEG +V A EL + A+K L ++ ++ + SRL H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 498 GNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHS----DEEAHKKFSWNIRIRVALGAAR 553
V+L + + Y N L + DE + ++ I
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI--------VS 143
Query: 554 ALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGS 613
AL+YL I+H + K NILL+E + ++++D G A +L S + +
Sbjct: 144 ALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 614 GAPEFESGSYSCQ-SDVYSLGVVMLELLTGRKPY 646
+PE + +C+ SD+++LG ++ +L+ G P+
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 91/214 (42%), Gaps = 18/214 (8%)
Query: 440 NSFSEGNFIGEGLLGSVYKA-ELPGGKLLAVKKLSNTVSQRQTDEEFLELA-STISRLRH 497
F G +GEG +V A EL + A+K L ++ ++ +SRL H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 498 GNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHS----DEEAHKKFSWNIRIRVALGAAR 553
V+L + + Y N L + DE + ++ I
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI--------VS 141
Query: 554 ALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGS 613
AL+YL I+H + K NILL+E + ++++D G A +L S + +
Sbjct: 142 ALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 198
Query: 614 GAPEFESGSYSCQ-SDVYSLGVVMLELLTGRKPY 646
+PE + +C+ SD+++LG ++ +L+ G P+
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 112/286 (39%), Gaps = 41/286 (14%)
Query: 448 IGEGLLGSVYKAELPG------GKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIV 501
+G+G G VY+ G +A+K ++ S R+ E FL AS + ++V
Sbjct: 18 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE-FLNEASVMKEFNCHHVV 76
Query: 502 ELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKF------SWNIRIRVALGAARAL 555
L+G ++ L++ + L L S + S + I++A A +
Sbjct: 77 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 136
Query: 556 QYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLA-PLLFSGSTNELSEGLLTAHGSG 614
YL VH + + N ++ E V++ D G+ + + + +GLL
Sbjct: 137 AYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMS 193
Query: 615 APEFESGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSR 673
+ G ++ SDV+S GVV+ E+ T +PY Q L + R
Sbjct: 194 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY--------QGLSNEQVLRF-------- 237
Query: 674 MVDPSLDGAYLAK---SLSRFADIISRCVQWEPGFRPPMSEIVQDL 716
++G L K +++ C Q+ P RP EI+ +
Sbjct: 238 ----VMEGGLLDKPDNCPDMLLELMRMCWQYNPKMRPSFLEIISSI 279
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 58/109 (53%), Gaps = 11/109 (10%)
Query: 552 ARALQYLQEVC-------EPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELS 604
ARA+ Y E+C IV+ + K NILLD+ +R+SD GLA + G T
Sbjct: 286 ARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT---I 342
Query: 605 EGLLTAHGSGAPE-FESGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPR 652
+G + G APE ++ Y+ D ++LG ++ E++ G+ P+ + + +
Sbjct: 343 KGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKK 391
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 91/214 (42%), Gaps = 18/214 (8%)
Query: 440 NSFSEGNFIGEGLLGSVYKA-ELPGGKLLAVKKLSNTVSQRQTDEEFLELASTI-SRLRH 497
F G +GEG +V A EL + A+K L ++ ++ + SRL H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 498 GNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHS----DEEAHKKFSWNIRIRVALGAAR 553
V+L + + Y N L + DE + ++ I
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI--------VS 141
Query: 554 ALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGS 613
AL+YL I+H + K NILL+E + ++++D G A +L S + +
Sbjct: 142 ALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 198
Query: 614 GAPEFESGSYSCQ-SDVYSLGVVMLELLTGRKPY 646
+PE + +C+ SD+++LG ++ +L+ G P+
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 91/214 (42%), Gaps = 18/214 (8%)
Query: 440 NSFSEGNFIGEGLLGSVYKA-ELPGGKLLAVKKLSNTVSQRQTDEEFLELA-STISRLRH 497
F G +GEG +V A EL + A+K L ++ ++ +SRL H
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 94
Query: 498 GNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHS----DEEAHKKFSWNIRIRVALGAAR 553
V+L + + Y N L + DE + ++ I
Sbjct: 95 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI--------VS 146
Query: 554 ALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGS 613
AL+YL I+H + K NILL+E + ++++D G A +L S + +
Sbjct: 147 ALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 203
Query: 614 GAPEFESGSYSCQ-SDVYSLGVVMLELLTGRKPY 646
+PE + +C+ SD+++LG ++ +L+ G P+
Sbjct: 204 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 237
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 89/213 (41%), Gaps = 18/213 (8%)
Query: 448 IGEGLLGSVYKAEL------PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIV 501
+G G G VY+ ++ P +AVK L S+ Q + +FL A IS+L H NIV
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSE-QDELDFLMEALIISKLNHQNIV 111
Query: 502 ELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKK---FSWNIRIRVALGAARALQYL 558
IG + ++ + L L + + + VA A QYL
Sbjct: 112 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 171
Query: 559 QEVCEPPIVHGNFKSSNILLD---EKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGA 615
+E +H + + N LL + ++ D G+A ++ S +
Sbjct: 172 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 228
Query: 616 PE-FESGSYSCQSDVYSLGVVMLELLT-GRKPY 646
PE F G ++ ++D +S GV++ E+ + G PY
Sbjct: 229 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPY 261
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 91/214 (42%), Gaps = 18/214 (8%)
Query: 440 NSFSEGNFIGEGLLGSVYKA-ELPGGKLLAVKKLSNTVSQRQTDEEFLELA-STISRLRH 497
F G +GEG +V A EL + A+K L ++ ++ +SRL H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 498 GNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHS----DEEAHKKFSWNIRIRVALGAAR 553
V+L + + Y N L + DE + ++ I
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI--------VS 143
Query: 554 ALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGS 613
AL+YL I+H + K NILL+E + ++++D G A +L S + +
Sbjct: 144 ALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 614 GAPEFESGSYSCQ-SDVYSLGVVMLELLTGRKPY 646
+PE + +C+ SD+++LG ++ +L+ G P+
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 91/214 (42%), Gaps = 18/214 (8%)
Query: 440 NSFSEGNFIGEGLLGSVYKA-ELPGGKLLAVKKLSNTVSQRQTDEEFLELA-STISRLRH 497
F G +GEG +V A EL + A+K L ++ ++ +SRL H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 498 GNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHS----DEEAHKKFSWNIRIRVALGAAR 553
V+L + + Y N L + DE + ++ I
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI--------VS 143
Query: 554 ALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGS 613
AL+YL I+H + K NILL+E + ++++D G A +L S + +
Sbjct: 144 ALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 614 GAPEFESGSYSCQ-SDVYSLGVVMLELLTGRKPY 646
+PE + +C+ SD+++LG ++ +L+ G P+
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 112/286 (39%), Gaps = 41/286 (14%)
Query: 448 IGEGLLGSVYKAELPG------GKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIV 501
+G+G G VY+ G +A+K ++ S R+ E FL AS + ++V
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE-FLNEASVMKEFNCHHVV 85
Query: 502 ELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKF------SWNIRIRVALGAARAL 555
L+G ++ L++ + L L S + S + I++A A +
Sbjct: 86 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 145
Query: 556 QYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLA-PLLFSGSTNELSEGLLTAHGSG 614
YL VH + + N ++ E V++ D G+ + + + +GLL
Sbjct: 146 AYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMS 202
Query: 615 APEFESGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSR 673
+ G ++ SDV+S GVV+ E+ T +PY Q L + R
Sbjct: 203 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY--------QGLSNEQVLRF-------- 246
Query: 674 MVDPSLDGAYLAK---SLSRFADIISRCVQWEPGFRPPMSEIVQDL 716
++G L K +++ C Q+ P RP EI+ +
Sbjct: 247 ----VMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSI 288
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 105/252 (41%), Gaps = 44/252 (17%)
Query: 477 SQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAH 536
+ R E F E AS +S+L H ++V G C +++LV ++ +L L ++
Sbjct: 51 AHRNYSESFFEAASMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNC- 109
Query: 537 KKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILL----DEKL----IVRVSD 588
W ++ VA A A+ +L+ E ++HGN + NILL D K +++SD
Sbjct: 110 INILW--KLEVAKQLAWAMHFLE---ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSD 164
Query: 589 CGLAPLLFSGSTNELSEGLLTAHGSGAPE---FESGSYSCQSDVYSLGVVMLELLT-GRK 644
G+ S L + +L P + + +D +S G + E+ + G K
Sbjct: 165 PGI-------SITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDK 217
Query: 645 PYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPG 704
P L +D+ ++ A + A++I+ C+ +EP
Sbjct: 218 P-------------------LSALDSQRKLQFYEDRHQLPAPKAAELANLINNCMDYEPD 258
Query: 705 FRPPMSEIVQDL 716
RP I++DL
Sbjct: 259 HRPSFRAIIRDL 270
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 105/252 (41%), Gaps = 44/252 (17%)
Query: 477 SQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAH 536
+ R E F E AS +S+L H ++V G C +++LV ++ +L L ++
Sbjct: 51 AHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNC- 109
Query: 537 KKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILL----DEKL----IVRVSD 588
W ++ VA A A+ +L+ E ++HGN + NILL D K +++SD
Sbjct: 110 INILW--KLEVAKQLAAAMHFLE---ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSD 164
Query: 589 CGLAPLLFSGSTNELSEGLLTAHGSGAPE---FESGSYSCQSDVYSLGVVMLELLT-GRK 644
G+ S L + +L P + + +D +S G + E+ + G K
Sbjct: 165 PGI-------SITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDK 217
Query: 645 PYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPG 704
P L +D+ ++ A + A++I+ C+ +EP
Sbjct: 218 P-------------------LSALDSQRKLQFYEDRHQLPAPKAAELANLINNCMDYEPD 258
Query: 705 FRPPMSEIVQDL 716
RP I++DL
Sbjct: 259 HRPSFRAIIRDL 270
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 98/230 (42%), Gaps = 28/230 (12%)
Query: 432 IASLQQYTNSFSEGNFIGEGLLGSVYKAE-LPGGKLLAVKKLSNTVSQRQTDEEFLELAS 490
+++L+ F +G G G VYK + G+L A+K + T + + ++ + +
Sbjct: 16 LSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLK 75
Query: 491 TISRLRHGNIVELIGYCNEHG------QHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIR 544
S H NI G + Q LV ++ G ++ DL+ + + K W
Sbjct: 76 KYSH--HRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEW--- 130
Query: 545 IRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLL--------- 595
+A L+ L + + ++H + K N+LL E V++ D G++ L
Sbjct: 131 --IAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNT 188
Query: 596 FSGSTNELSEGLLTAHGSGAPEFESGSYSCQSDVYSLGVVMLELLTGRKP 645
F G+ ++ ++ E +Y +SD++SLG+ +E+ G P
Sbjct: 189 FIGTPYWMAPEVI-----ACDENPDATYDFKSDLWSLGITAIEMAEGAPP 233
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 91/214 (42%), Gaps = 18/214 (8%)
Query: 440 NSFSEGNFIGEGLLGSVYKA-ELPGGKLLAVKKLSNTVSQRQTDEEFLELA-STISRLRH 497
F G +GEG +V A EL + A+K L ++ ++ +SRL H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 498 GNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHS----DEEAHKKFSWNIRIRVALGAAR 553
V+L + + Y N L + DE + ++ I
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI--------VS 140
Query: 554 ALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGS 613
AL+YL I+H + K NILL+E + ++++D G A +L S + +
Sbjct: 141 ALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQY 197
Query: 614 GAPEFESGSYSCQ-SDVYSLGVVMLELLTGRKPY 646
+PE + +C+ SD+++LG ++ +L+ G P+
Sbjct: 198 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 231
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 107/300 (35%), Gaps = 47/300 (15%)
Query: 440 NSFSEGNFIGEGLLGSVYKAELPG------GKLLAVKKLSNTVSQRQTDEEFLELASTIS 493
N S G +G G G V +A G +AVK L + + + EL
Sbjct: 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 82
Query: 494 RLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKF-------------- 539
H NIV L+G C G L++ +Y C DLL+ F
Sbjct: 83 LGNHMNIVNLLGACTIGGPTLVITEY---CCYGDLLNFLRRKRDSFICSKTSPAIMEDDE 139
Query: 540 ---SWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLF 596
+ + A+ + +L +H + + NILL I ++ D GLA +
Sbjct: 140 LALDLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIK 196
Query: 597 SGSTNELSEGLLTAHGSGAPE-FESGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGE 654
+ S + APE + Y+ +SDV+S G+ + EL + G PY
Sbjct: 197 NDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPY-------- 248
Query: 655 QSLVRWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQ 714
P + +M+ + + DI+ C +P RP +IVQ
Sbjct: 249 --------PGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 300
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 96/208 (46%), Gaps = 8/208 (3%)
Query: 439 TNSFSEGNFIGEGLLGSVYKA-ELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRH 497
++ F + +G G +VYK G +A+K++ S+ T + S + L+H
Sbjct: 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVK-LDSEEGTPSTAIREISLMKELKH 62
Query: 498 GNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQY 557
NIV L + + LV+++ N L + S + + + V + LQ
Sbjct: 63 ENIVRLYDVIHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNL-VKYFQWQLLQG 120
Query: 558 LQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPE 617
L E I+H + K N+L++++ +++ D GLA F N S ++T AP+
Sbjct: 121 LAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARA-FGIPVNTFSSEVVTL-WYRAPD 178
Query: 618 FESGS--YSCQSDVYSLGVVMLELLTGR 643
GS YS D++S G ++ E++TG+
Sbjct: 179 VLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 93/229 (40%), Gaps = 46/229 (20%)
Query: 439 TNSFSEGNFIGEGLLGSVYK-AELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRL-R 496
T+ + IG+G V + +L G A K + NT D + LE + I RL +
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAK-IINTKKLSARDHQKLEREARICRLLK 61
Query: 497 HGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQ 556
H NIV L +E G H LV+D L + +I R A A
Sbjct: 62 HSNIVRLHDSISEEGFHYLVFDLVTGGELFE--------------DIVAREYYSEADASH 107
Query: 557 YLQEVCEPP-------IVHGNFKSSNILLDEKL---IVRVSDCGLAPLL---------FS 597
+Q++ E +VH + K N+LL K V+++D GLA + F+
Sbjct: 108 CIQQILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFA 167
Query: 598 GSTNELSEGLLTAHGSGAPEFESGSYSCQSDVYSLGVVMLELLTGRKPY 646
G+ LS +L G P D+++ GV++ LL G P+
Sbjct: 168 GTPGYLSPEVLRKEAYGKP----------VDIWACGVILYILLVGYPPF 206
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 100/244 (40%), Gaps = 49/244 (20%)
Query: 437 QYTNSFSEGNFIGEGLLGSVYKAE--LPGGKLLAVKKLSNTVSQRQTDEEFLELASTISR 494
++T + +G+G V + L G + A+ + NT D + LE + I R
Sbjct: 8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAM--IINTKKLSARDHQKLEREARICR 65
Query: 495 L-RHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAAR 553
L +H NIV L +E G H L++D L + +I R A
Sbjct: 66 LLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFE--------------DIVAREYYSEAD 111
Query: 554 ALQYLQEVCEPP-------IVHGNFKSSNILLDEKL---IVRVSDCGLAPLL-------- 595
A +Q++ E +VH N K N+LL KL V+++D GLA +
Sbjct: 112 ASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWF 171
Query: 596 -FSGSTNELSEGLLTAHGSGAPEFESGSYSCQSDVYSLGVVMLELLTGRKPY-DRSRPRG 653
F+G+ LS +L G P D+++ GV++ LL G P+ D + R
Sbjct: 172 GFAGTPGYLSPEVLRKDPYGKP----------VDLWACGVILYILLVGYPPFWDEDQHRL 221
Query: 654 EQSL 657
Q +
Sbjct: 222 YQQI 225
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 107/300 (35%), Gaps = 47/300 (15%)
Query: 440 NSFSEGNFIGEGLLGSVYKAELPG------GKLLAVKKLSNTVSQRQTDEEFLELASTIS 493
N S G +G G G V +A G +AVK L + + + EL
Sbjct: 39 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 98
Query: 494 RLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKF-------------- 539
H NIV L+G C G L++ +Y C DLL+ F
Sbjct: 99 LGNHMNIVNLLGACTIGGPTLVITEY---CCYGDLLNFLRRKRDSFICSKTSPAIMEDDE 155
Query: 540 ---SWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLF 596
+ + A+ + +L +H + + NILL I ++ D GLA +
Sbjct: 156 LALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIK 212
Query: 597 SGSTNELSEGLLTAHGSGAPE-FESGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGE 654
+ S + APE + Y+ +SDV+S G+ + EL + G PY
Sbjct: 213 NDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPY-------- 264
Query: 655 QSLVRWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQ 714
P + +M+ + + DI+ C +P RP +IVQ
Sbjct: 265 --------PGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 316
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 107/300 (35%), Gaps = 47/300 (15%)
Query: 440 NSFSEGNFIGEGLLGSVYKAELPG------GKLLAVKKLSNTVSQRQTDEEFLELASTIS 493
N S G +G G G V +A G +AVK L + + + EL
Sbjct: 46 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 105
Query: 494 RLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKF-------------- 539
H NIV L+G C G L++ +Y C DLL+ F
Sbjct: 106 LGNHMNIVNLLGACTIGGPTLVITEY---CCYGDLLNFLRRKRDSFICSKTSPAIMEDDE 162
Query: 540 ---SWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLF 596
+ + A+ + +L +H + + NILL I ++ D GLA +
Sbjct: 163 LALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARHIK 219
Query: 597 SGSTNELSEGLLTAHGSGAPE-FESGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGE 654
+ S + APE + Y+ +SDV+S G+ + EL + G PY
Sbjct: 220 NDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPY-------- 271
Query: 655 QSLVRWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQ 714
P + +M+ + + DI+ C +P RP +IVQ
Sbjct: 272 --------PGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 323
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 92/207 (44%), Gaps = 11/207 (5%)
Query: 440 NSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGN 499
+ F + + +G G G V+K L+ +KL + + + + +
Sbjct: 68 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 127
Query: 500 IVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQ 559
IV G G+ + ++ +L +L + + I +V++ + L YL+
Sbjct: 128 IVGFYGAFYSDGEISICMEHMDGGSLDQVL----KKAGRIPEQILGKVSIAVIKGLTYLR 183
Query: 560 EVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE 619
E + I+H + K SNIL++ + +++ D G++ L N + +PE
Sbjct: 184 EKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN----SFVGTRSYMSPERL 237
Query: 620 SGS-YSCQSDVYSLGVVMLELLTGRKP 645
G+ YS QSD++S+G+ ++E+ GR P
Sbjct: 238 QGTHYSVQSDIWSMGLSLVEMAVGRYP 264
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 115/276 (41%), Gaps = 32/276 (11%)
Query: 442 FSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIV 501
F++ + IG+G G VYK K + K+ + E+ + + +S+ I
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 502 ELIGYCNEHGQHLLVYDYGGNCTLHDLLHSD--EEAHKKFSWNIRIRVALGAARALQYLQ 559
G + + ++ +Y G + DLL EE + +A L+ L
Sbjct: 81 RYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETY----------IATILREILKGLD 130
Query: 560 EVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPE-F 618
+ +H + K++N+LL E+ V+++D G+A L T + APE
Sbjct: 131 YLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQL--TDTQIKRNXFVGTPFWMAPEVI 188
Query: 619 ESGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPS 678
+ +Y ++D++SLG+ +EL G P P V + IP + P+
Sbjct: 189 KQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMR----VLFLIP---------KNSPPT 235
Query: 679 LDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQ 714
L+G + F + + C+ +P FRP E+++
Sbjct: 236 LEGQHSKP----FKEFVEACLNKDPRFRPTAKELLK 267
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 91/214 (42%), Gaps = 18/214 (8%)
Query: 440 NSFSEGNFIGEGLLGSVYKA-ELPGGKLLAVKKLSNTVSQRQTDEEFLELA-STISRLRH 497
F G +GEG +V A EL + A+K L ++ ++ +SRL H
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 73
Query: 498 GNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHS----DEEAHKKFSWNIRIRVALGAAR 553
V+L + + Y N L + DE + ++ I
Sbjct: 74 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI--------VS 125
Query: 554 ALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGS 613
AL+YL I+H + K NILL+E + ++++D G A +L S + +
Sbjct: 126 ALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 182
Query: 614 GAPEFESGSYSCQ-SDVYSLGVVMLELLTGRKPY 646
+PE + +C+ SD+++LG ++ +L+ G P+
Sbjct: 183 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 216
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 88/214 (41%), Gaps = 21/214 (9%)
Query: 441 SFSEGNFIGEGLLGSVYKAELPG-GKLLAVKKLSNTVSQRQTDEEFLELASTISRL--RH 497
F +G+G G V+ AE + A+K L V D E + + L H
Sbjct: 19 DFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEH 78
Query: 498 GNIVELIGYCNEHGQHLLVYDY--GGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARAL 555
+ + V +Y GG DL++ + HK F + R AA +
Sbjct: 79 PFLTHMFCTFQTKENLFFVMEYLNGG-----DLMYHIQSCHK-FDLS---RATFYAAEII 129
Query: 556 QYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAP--LLFSGSTNELSEGLLTAHGS 613
LQ + IV+ + K NILLD+ ++++D G+ +L TNE
Sbjct: 130 LGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFC----GTPDY 185
Query: 614 GAPEFESG-SYSCQSDVYSLGVVMLELLTGRKPY 646
APE G Y+ D +S GV++ E+L G+ P+
Sbjct: 186 IAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF 219
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 91/214 (42%), Gaps = 18/214 (8%)
Query: 440 NSFSEGNFIGEGLLGSVYKA-ELPGGKLLAVKKLSNTVSQRQTDEEFLELA-STISRLRH 497
F G +GEG +V A EL + A+K L ++ ++ +SRL H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 498 GNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHS----DEEAHKKFSWNIRIRVALGAAR 553
V+L + + Y N L + DE + ++ I
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI--------VS 140
Query: 554 ALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGS 613
AL+YL I+H + K NILL+E + ++++D G A +L S + +
Sbjct: 141 ALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 197
Query: 614 GAPEFESGSYSCQ-SDVYSLGVVMLELLTGRKPY 646
+PE + +C+ SD+++LG ++ +L+ G P+
Sbjct: 198 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 231
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 107/300 (35%), Gaps = 47/300 (15%)
Query: 440 NSFSEGNFIGEGLLGSVYKAELPG------GKLLAVKKLSNTVSQRQTDEEFLELASTIS 493
N S G +G G G V +A G +AVK L + + + EL
Sbjct: 46 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 105
Query: 494 RLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKF-------------- 539
H NIV L+G C G L++ +Y C DLL+ F
Sbjct: 106 LGNHMNIVNLLGACTIGGPTLVITEY---CCYGDLLNFLRRKRDSFICSKTSPAIMEDDE 162
Query: 540 ---SWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLF 596
+ + A+ + +L +H + + NILL I ++ D GLA +
Sbjct: 163 LALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIK 219
Query: 597 SGSTNELSEGLLTAHGSGAPE-FESGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGE 654
+ S + APE + Y+ +SDV+S G+ + EL + G PY
Sbjct: 220 NDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPY-------- 271
Query: 655 QSLVRWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQ 714
P + +M+ + + DI+ C +P RP +IVQ
Sbjct: 272 --------PGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 323
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 88/213 (41%), Gaps = 18/213 (8%)
Query: 448 IGEGLLGSVYKAEL------PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIV 501
+G G G VY+ ++ P +AVK L S+ Q + +FL A IS+ H NIV
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSE-QDELDFLMEALIISKFNHQNIV 97
Query: 502 ELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKK---FSWNIRIRVALGAARALQYL 558
IG + ++ + L L + + + VA A QYL
Sbjct: 98 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 157
Query: 559 QEVCEPPIVHGNFKSSNILLD---EKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGA 615
+E +H + + N LL + ++ D G+A ++ S +
Sbjct: 158 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMP 214
Query: 616 PE-FESGSYSCQSDVYSLGVVMLELLT-GRKPY 646
PE F G ++ ++D +S GV++ E+ + G PY
Sbjct: 215 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPY 247
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 88/213 (41%), Gaps = 18/213 (8%)
Query: 448 IGEGLLGSVYKAEL------PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIV 501
+G G G VY+ ++ P +AVK L S+ Q + +FL A IS+ H NIV
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSE-QDELDFLMEALIISKFNHQNIV 88
Query: 502 ELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKK---FSWNIRIRVALGAARALQYL 558
IG + ++ + L L + + + VA A QYL
Sbjct: 89 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 148
Query: 559 QEVCEPPIVHGNFKSSNILLD---EKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGA 615
+E +H + + N LL + ++ D G+A ++ S +
Sbjct: 149 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 205
Query: 616 PE-FESGSYSCQSDVYSLGVVMLELLT-GRKPY 646
PE F G ++ ++D +S GV++ E+ + G PY
Sbjct: 206 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPY 238
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 92/207 (44%), Gaps = 11/207 (5%)
Query: 440 NSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGN 499
+ F + + +G G G V+K L+ +KL + + + + +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 500 IVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQ 559
IV G G+ + ++ +L +L + + I +V++ + L YL+
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVL----KKAGRIPEQILGKVSIAVIKGLTYLR 121
Query: 560 EVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE 619
E + I+H + K SNIL++ + +++ D G++ L N + +PE
Sbjct: 122 E--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN----SFVGTRSYMSPERL 175
Query: 620 SGS-YSCQSDVYSLGVVMLELLTGRKP 645
G+ YS QSD++S+G+ ++E+ GR P
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 92/207 (44%), Gaps = 11/207 (5%)
Query: 440 NSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGN 499
+ F + + +G G G V+K L+ +KL + + + + +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 500 IVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQ 559
IV G G+ + ++ +L +L + + I +V++ + L YL+
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVL----KKAGRIPEQILGKVSIAVIKGLTYLR 121
Query: 560 EVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE 619
E + I+H + K SNIL++ + +++ D G++ L N + +PE
Sbjct: 122 E--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN----SFVGTRSYMSPERL 175
Query: 620 SGS-YSCQSDVYSLGVVMLELLTGRKP 645
G+ YS QSD++S+G+ ++E+ GR P
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 92/207 (44%), Gaps = 11/207 (5%)
Query: 440 NSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGN 499
+ F + + +G G G V+K L+ +KL + + + + +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 500 IVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQ 559
IV G G+ + ++ +L +L + + I +V++ + L YL+
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVL----KKAGRIPEQILGKVSIAVIKGLTYLR 121
Query: 560 EVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE 619
E + I+H + K SNIL++ + +++ D G++ L N + +PE
Sbjct: 122 E--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN----SFVGTRSYMSPERL 175
Query: 620 SGS-YSCQSDVYSLGVVMLELLTGRKP 645
G+ YS QSD++S+G+ ++E+ GR P
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 107/300 (35%), Gaps = 47/300 (15%)
Query: 440 NSFSEGNFIGEGLLGSVYKAELPG------GKLLAVKKLSNTVSQRQTDEEFLELASTIS 493
N S G +G G G V +A G +AVK L + + + EL
Sbjct: 41 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 100
Query: 494 RLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKF-------------- 539
H NIV L+G C G L++ +Y C DLL+ F
Sbjct: 101 LGNHMNIVNLLGACTIGGPTLVITEY---CCYGDLLNFLRRKRDSFICSKTSPAIMEDDE 157
Query: 540 ---SWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLF 596
+ + A+ + +L +H + + NILL I ++ D GLA +
Sbjct: 158 LALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIK 214
Query: 597 SGSTNELSEGLLTAHGSGAPE-FESGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGE 654
+ S + APE + Y+ +SDV+S G+ + EL + G PY
Sbjct: 215 NDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPY-------- 266
Query: 655 QSLVRWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQ 714
P + +M+ + + DI+ C +P RP +IVQ
Sbjct: 267 --------PGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 318
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 121/281 (43%), Gaps = 34/281 (12%)
Query: 440 NSFSEGNFIGEGLLGSVYK-AELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISR-LRH 497
+ G F+G+G Y+ ++ ++ A K + ++ + +E + I + L +
Sbjct: 26 KRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDN 85
Query: 498 GNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQY 557
++V G+ + VY C LL E HK+ + +Q
Sbjct: 86 PHVVGFHGFFEDDD---FVYVVLEICRRRSLL----ELHKRRKAVTEPEARYFMRQTIQG 138
Query: 558 LQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLL-FSGSTNELSEGLLTAHGSGAP 616
+Q + ++H + K N+ L++ + V++ D GLA + F G E + L AP
Sbjct: 139 VQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDG---ERKKDLCGTPNYIAP 195
Query: 617 E-FESGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDID-ALSRM 674
E +S + D++SLG ++ LL G+ P+ E S ++ R+ + ++ R
Sbjct: 196 EVLCKKGHSFEVDIWSLGCILYTLLVGKPPF-------ETSCLKETYIRIKKNEYSVPRH 248
Query: 675 VDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715
++P +A +L I R + +P RP ++E++ D
Sbjct: 249 INP------VASAL------IRRMLHADPTLRPSVAELLTD 277
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 91/200 (45%), Gaps = 17/200 (8%)
Query: 448 IGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYC 507
IGEG G VYKA+ G+ A+KK+ + S + L+H NIV+L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 508 NEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVC---EP 564
+ + +LV+++ + L LL E + + LQ L + +
Sbjct: 70 HTKKRLVLVFEH-LDQDLKKLLDVCEGG---------LESVTAKSFLLQLLNGIAYCHDR 119
Query: 565 PIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFESGS-- 622
++H + K N+L++ + ++++D GLA F + + ++T AP+ GS
Sbjct: 120 RVLHRDLKPQNLLINREGELKIADFGLAR-AFGIPVRKYTHEIVTL-WYRAPDVLMGSKK 177
Query: 623 YSCQSDVYSLGVVMLELLTG 642
YS D++S+G + E++ G
Sbjct: 178 YSTTIDIWSVGCIFAEMVNG 197
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 88/213 (41%), Gaps = 18/213 (8%)
Query: 448 IGEGLLGSVYKAEL------PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIV 501
+G G G VY+ ++ P +AVK L S+ Q + +FL A IS+ H NIV
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSE-QDELDFLMEALIISKFNHQNIV 111
Query: 502 ELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKK---FSWNIRIRVALGAARALQYL 558
IG + ++ + L L + + + VA A QYL
Sbjct: 112 RCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 171
Query: 559 QEVCEPPIVHGNFKSSNILLD---EKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGA 615
+E +H + + N LL + ++ D G+A ++ S +
Sbjct: 172 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 228
Query: 616 PE-FESGSYSCQSDVYSLGVVMLELLT-GRKPY 646
PE F G ++ ++D +S GV++ E+ + G PY
Sbjct: 229 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPY 261
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 88/213 (41%), Gaps = 18/213 (8%)
Query: 448 IGEGLLGSVYKAEL------PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIV 501
+G G G VY+ ++ P +AVK L S+ Q + +FL A IS+ H NIV
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSE-QDELDFLMEALIISKFNHQNIV 96
Query: 502 ELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKK---FSWNIRIRVALGAARALQYL 558
IG + ++ + L L + + + VA A QYL
Sbjct: 97 RCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 156
Query: 559 QEVCEPPIVHGNFKSSNILLD---EKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGA 615
+E +H + + N LL + ++ D G+A ++ S +
Sbjct: 157 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 213
Query: 616 PE-FESGSYSCQSDVYSLGVVMLELLT-GRKPY 646
PE F G ++ ++D +S GV++ E+ + G PY
Sbjct: 214 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPY 246
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 105/216 (48%), Gaps = 15/216 (6%)
Query: 465 KLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCT 524
K +A+KK+ ++ Q+ + L I RL H NIV++ G L D G+ T
Sbjct: 37 KRVAIKKI--VLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLT--DDVGSLT 92
Query: 525 LHDLLHSDEEAHKKFSWNIRIRVAL--GAARALQY-----LQEVCEPPIVHGNFKSSNIL 577
+ ++ +E + N+ + L AR Y L+ + ++H + K +N+
Sbjct: 93 ELNSVYIVQEYMETDLANVLEQGPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLF 152
Query: 578 LD-EKLIVRVSDCGLAPLLFSGSTNE--LSEGLLTA-HGSGAPEFESGSYSCQSDVYSLG 633
++ E L++++ D GLA ++ +++ LSEGL+T + S +Y+ D+++ G
Sbjct: 153 INTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAG 212
Query: 634 VVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDID 669
+ E+LTG+ + + + L+ +IP +H+ D
Sbjct: 213 CIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEED 248
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 80/169 (47%), Gaps = 19/169 (11%)
Query: 546 RVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSE 605
+V++ + L YL+E + I+H + K SNIL++ + +++ D G++ L N
Sbjct: 127 KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF-- 182
Query: 606 GLLTAHGSGAPEFESGS-YSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPR 664
+ +PE G+ YS QSD++S+G+ ++E+ GR P G S+ + +
Sbjct: 183 --VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIG----SGSGSMAIFEL-- 234
Query: 665 LHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIV 713
+D + P L + F D +++C+ P R + +++
Sbjct: 235 ---LDYIVNEPPPKLPSGVFS---LEFQDFVNKCLIKNPAERADLKQLM 277
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 92/207 (44%), Gaps = 11/207 (5%)
Query: 440 NSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGN 499
+ F + + +G G G V+K L+ +KL + + + + +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 500 IVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQ 559
IV G G+ + ++ +L +L + + I +V++ + L YL+
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVL----KKAGRIPEQILGKVSIAVIKGLTYLR 121
Query: 560 EVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE 619
E + I+H + K SNIL++ + +++ D G++ L N + +PE
Sbjct: 122 E--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN----SFVGTRSYMSPERL 175
Query: 620 SGS-YSCQSDVYSLGVVMLELLTGRKP 645
G+ YS QSD++S+G+ ++E+ GR P
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 91/200 (45%), Gaps = 17/200 (8%)
Query: 448 IGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYC 507
IGEG G VYKA+ G+ A+KK+ + S + L+H NIV+L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 508 NEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVC---EP 564
+ + +LV+++ + L LL E + + LQ L + +
Sbjct: 70 HTKKRLVLVFEH-LDQDLKKLLDVCEGG---------LESVTAKSFLLQLLNGIAYCHDR 119
Query: 565 PIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFESGS-- 622
++H + K N+L++ + ++++D GLA F + + ++T AP+ GS
Sbjct: 120 RVLHRDLKPQNLLINREGELKIADFGLAR-AFGIPVRKYTHEVVTL-WYRAPDVLMGSKK 177
Query: 623 YSCQSDVYSLGVVMLELLTG 642
YS D++S+G + E++ G
Sbjct: 178 YSTTIDIWSVGCIFAEMVNG 197
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 88/213 (41%), Gaps = 18/213 (8%)
Query: 448 IGEGLLGSVYKAEL------PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIV 501
+G G G VY+ ++ P +AVK L S+ Q + +FL A IS+ H NIV
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSE-QDELDFLMEALIISKFNHQNIV 96
Query: 502 ELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKK---FSWNIRIRVALGAARALQYL 558
IG + ++ + L L + + + VA A QYL
Sbjct: 97 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 156
Query: 559 QEVCEPPIVHGNFKSSNILLD---EKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGA 615
+E +H + + N LL + ++ D G+A ++ S +
Sbjct: 157 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 213
Query: 616 PE-FESGSYSCQSDVYSLGVVMLELLT-GRKPY 646
PE F G ++ ++D +S GV++ E+ + G PY
Sbjct: 214 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPY 246
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 91/200 (45%), Gaps = 17/200 (8%)
Query: 448 IGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYC 507
IGEG G VYKA+ G+ A+KK+ + S + L+H NIV+L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 508 NEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVC---EP 564
+ + +LV+++ + L LL E + + LQ L + +
Sbjct: 70 HTKKRLVLVFEH-LDQDLKKLLDVCEGG---------LESVTAKSFLLQLLNGIAYCHDR 119
Query: 565 PIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFESGS-- 622
++H + K N+L++ + ++++D GLA F + + ++T AP+ GS
Sbjct: 120 RVLHRDLKPQNLLINREGELKIADFGLAR-AFGIPVRKYTHEVVTL-WYRAPDVLMGSKK 177
Query: 623 YSCQSDVYSLGVVMLELLTG 642
YS D++S+G + E++ G
Sbjct: 178 YSTTIDIWSVGCIFAEMVNG 197
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 88/213 (41%), Gaps = 18/213 (8%)
Query: 448 IGEGLLGSVYKAEL------PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIV 501
+G G G VY+ ++ P +AVK L S+ Q + +FL A IS+ H NIV
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSE-QDELDFLMEALIISKFNHQNIV 97
Query: 502 ELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKK---FSWNIRIRVALGAARALQYL 558
IG + ++ + L L + + + VA A QYL
Sbjct: 98 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 157
Query: 559 QEVCEPPIVHGNFKSSNILLD---EKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGA 615
+E +H + + N LL + ++ D G+A ++ S +
Sbjct: 158 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 214
Query: 616 PE-FESGSYSCQSDVYSLGVVMLELLT-GRKPY 646
PE F G ++ ++D +S GV++ E+ + G PY
Sbjct: 215 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPY 247
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/281 (20%), Positives = 118/281 (41%), Gaps = 34/281 (12%)
Query: 440 NSFSEGNFIGEGLLGSVYK-AELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISR-LRH 497
+ G F+G+G Y+ ++ ++ A K + ++ + +E + I + L +
Sbjct: 42 KRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDN 101
Query: 498 GNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQY 557
++V G+ + VY C LL E HK+ + +Q
Sbjct: 102 PHVVGFHGFFEDDD---FVYVVLEICRRRSLL----ELHKRRKAVTEPEARYFMRQTIQG 154
Query: 558 LQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLL-FSGSTNELSEGLLTAHGSGAP 616
+Q + ++H + K N+ L++ + V++ D GLA + F G E + L AP
Sbjct: 155 VQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDG---ERKKDLCGTPNYIAP 211
Query: 617 E-FESGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDID-ALSRM 674
E +S + D++SLG ++ LL G+ P+ E S ++ R+ + ++ R
Sbjct: 212 EVLCKKGHSFEVDIWSLGCILYTLLVGKPPF-------ETSCLKETYIRIKKNEYSVPRH 264
Query: 675 VDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715
++P +I R + +P RP ++E++ D
Sbjct: 265 INPVASA------------LIRRMLHADPTLRPSVAELLTD 293
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 112/286 (39%), Gaps = 41/286 (14%)
Query: 448 IGEGLLGSVYKAELPG------GKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIV 501
+G+G G VY+ G +A+K ++ S R+ E FL AS + ++V
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE-FLNEASVMKEFNCHHVV 78
Query: 502 ELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKF------SWNIRIRVALGAARAL 555
L+G ++ L++ + L L S + S + I++A A +
Sbjct: 79 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 138
Query: 556 QYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLF-SGSTNELSEGLLTAHGSG 614
YL VH + + N + E V++ D G+ ++ + + +GLL
Sbjct: 139 AYLNA---NKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 195
Query: 615 APEFESGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSR 673
+ G ++ SDV+S GVV+ E+ T +PY Q L + R
Sbjct: 196 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY--------QGLSNEQVLRF-------- 239
Query: 674 MVDPSLDGAYLAK---SLSRFADIISRCVQWEPGFRPPMSEIVQDL 716
++G L K +++ C Q+ P RP EI+ +
Sbjct: 240 ----VMEGGLLDKPDNCPDMLLELMRMCWQYNPKMRPSFLEIISSI 281
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 92/209 (44%), Gaps = 26/209 (12%)
Query: 448 IGEGLLGSVYKAELPGGK-LLAVKKLSNTVSQRQTDEEFLELASTI-SRLRHGNIVELIG 505
+G+G G+VY A K ++A+K L + +++ E L I S LRH NI+ +
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 506 YCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPP 565
Y ++ + L+ ++ L+ L + H +F A AL Y E
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKEL----QKHGRFDEQRSATFMEELADALHYCHER---K 134
Query: 566 IVHGNFKSSNILLDEKLIVRVSDCGL---APLL----FSGSTNELSEGLLTAHGSGAPEF 618
++H + K N+L+ K ++++D G AP L G+ + L ++
Sbjct: 135 VIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCGTLDYLPPEMI---------- 184
Query: 619 ESGSYSCQSDVYSLGVVMLELLTGRKPYD 647
E ++ + D++ GV+ E L G P+D
Sbjct: 185 EGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/281 (20%), Positives = 118/281 (41%), Gaps = 34/281 (12%)
Query: 440 NSFSEGNFIGEGLLGSVYK-AELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISR-LRH 497
+ G F+G+G Y+ ++ ++ A K + ++ + +E + I + L +
Sbjct: 42 KRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDN 101
Query: 498 GNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQY 557
++V G+ + VY C LL E HK+ + +Q
Sbjct: 102 PHVVGFHGFFEDDD---FVYVVLEICRRRSLL----ELHKRRKAVTEPEARYFMRQTIQG 154
Query: 558 LQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLL-FSGSTNELSEGLLTAHGSGAP 616
+Q + ++H + K N+ L++ + V++ D GLA + F G E + L AP
Sbjct: 155 VQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDG---ERKKTLCGTPNYIAP 211
Query: 617 E-FESGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDID-ALSRM 674
E +S + D++SLG ++ LL G+ P+ E S ++ R+ + ++ R
Sbjct: 212 EVLCKKGHSFEVDIWSLGCILYTLLVGKPPF-------ETSCLKETYIRIKKNEYSVPRH 264
Query: 675 VDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715
++P +I R + +P RP ++E++ D
Sbjct: 265 INPVASA------------LIRRMLHADPTLRPSVAELLTD 293
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/281 (20%), Positives = 118/281 (41%), Gaps = 34/281 (12%)
Query: 440 NSFSEGNFIGEGLLGSVYK-AELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISR-LRH 497
+ G F+G+G Y+ ++ ++ A K + ++ + +E + I + L +
Sbjct: 42 KRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDN 101
Query: 498 GNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQY 557
++V G+ + VY C LL E HK+ + +Q
Sbjct: 102 PHVVGFHGFFEDDD---FVYVVLEICRRRSLL----ELHKRRKAVTEPEARYFMRQTIQG 154
Query: 558 LQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLL-FSGSTNELSEGLLTAHGSGAP 616
+Q + ++H + K N+ L++ + V++ D GLA + F G E + L AP
Sbjct: 155 VQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDG---ERKKXLCGTPNYIAP 211
Query: 617 E-FESGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDID-ALSRM 674
E +S + D++SLG ++ LL G+ P+ E S ++ R+ + ++ R
Sbjct: 212 EVLCKKGHSFEVDIWSLGCILYTLLVGKPPF-------ETSCLKETYIRIKKNEYSVPRH 264
Query: 675 VDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715
++P +I R + +P RP ++E++ D
Sbjct: 265 INPVASA------------LIRRMLHADPTLRPSVAELLTD 293
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 88/213 (41%), Gaps = 18/213 (8%)
Query: 448 IGEGLLGSVYKAEL------PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIV 501
+G G G VY+ ++ P +AVK L S+ Q + +FL A IS+ H NIV
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSE-QDELDFLMEALIISKFNHQNIV 113
Query: 502 ELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKK---FSWNIRIRVALGAARALQYL 558
IG + ++ + L L + + + VA A QYL
Sbjct: 114 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 173
Query: 559 QEVCEPPIVHGNFKSSNILLD---EKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGA 615
+E +H + + N LL + ++ D G+A ++ S +
Sbjct: 174 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 230
Query: 616 PE-FESGSYSCQSDVYSLGVVMLELLT-GRKPY 646
PE F G ++ ++D +S GV++ E+ + G PY
Sbjct: 231 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPY 263
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 88/213 (41%), Gaps = 18/213 (8%)
Query: 448 IGEGLLGSVYKAEL------PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIV 501
+G G G VY+ ++ P +AVK L S+ Q + +FL A IS+ H NIV
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSE-QDELDFLMEALIISKFNHQNIV 103
Query: 502 ELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKK---FSWNIRIRVALGAARALQYL 558
IG + ++ + L L + + + VA A QYL
Sbjct: 104 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 163
Query: 559 QEVCEPPIVHGNFKSSNILLD---EKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGA 615
+E +H + + N LL + ++ D G+A ++ S +
Sbjct: 164 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 220
Query: 616 PE-FESGSYSCQSDVYSLGVVMLELLT-GRKPY 646
PE F G ++ ++D +S GV++ E+ + G PY
Sbjct: 221 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPY 253
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 90/214 (42%), Gaps = 18/214 (8%)
Query: 440 NSFSEGNFIGEGLLGS-VYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELA-STISRLRH 497
F G +GEG + V EL + A+K L ++ ++ +SRL H
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 498 GNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHS----DEEAHKKFSWNIRIRVALGAAR 553
V+L + + Y N L + DE + ++ I
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI--------VS 141
Query: 554 ALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGS 613
AL+YL I+H + K NILL+E + ++++D G A +L S + +
Sbjct: 142 ALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 198
Query: 614 GAPEFESGSYSCQ-SDVYSLGVVMLELLTGRKPY 646
+PE + +C+ SD+++LG ++ +L+ G P+
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 92/207 (44%), Gaps = 11/207 (5%)
Query: 440 NSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGN 499
+ F + + +G G G V+K L+ +KL + + + + +
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 92
Query: 500 IVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQ 559
IV G G+ + ++ +L +L + + I +V++ + L YL+
Sbjct: 93 IVGFYGAFYSDGEISICMEHMDGGSLDQVL----KKAGRIPEQILGKVSIAVIKGLTYLR 148
Query: 560 EVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE 619
E + I+H + K SNIL++ + +++ D G++ L N + +PE
Sbjct: 149 E--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN----SFVGTRSYMSPERL 202
Query: 620 SGS-YSCQSDVYSLGVVMLELLTGRKP 645
G+ YS QSD++S+G+ ++E+ GR P
Sbjct: 203 QGTHYSVQSDIWSMGLSLVEMAVGRYP 229
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 88/213 (41%), Gaps = 18/213 (8%)
Query: 448 IGEGLLGSVYKAEL------PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIV 501
+G G G VY+ ++ P +AVK L S+ Q + +FL A IS+ H NIV
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSE-QDELDFLMEALIISKFNHQNIV 111
Query: 502 ELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKK---FSWNIRIRVALGAARALQYL 558
IG + ++ + L L + + + VA A QYL
Sbjct: 112 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 171
Query: 559 QEVCEPPIVHGNFKSSNILLD---EKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGA 615
+E +H + + N LL + ++ D G+A ++ S +
Sbjct: 172 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 228
Query: 616 PE-FESGSYSCQSDVYSLGVVMLELLT-GRKPY 646
PE F G ++ ++D +S GV++ E+ + G PY
Sbjct: 229 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPY 261
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 86/208 (41%), Gaps = 45/208 (21%)
Query: 471 KLSNTVSQRQTDEEFLELASTISRL-RHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLL 529
K+ NT D + LE + I RL +H NIV L +E G H L++D L +
Sbjct: 53 KIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFE-- 110
Query: 530 HSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPP-------IVHGNFKSSNILLDEKL 582
+I R A A +Q++ E +VH + K N+LL KL
Sbjct: 111 ------------DIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKL 158
Query: 583 ---IVRVSDCGLAPLL---------FSGSTNELSEGLLTAHGSGAPEFESGSYSCQSDVY 630
V+++D GLA + F+G+ LS +L G P D++
Sbjct: 159 KGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKP----------VDLW 208
Query: 631 SLGVVMLELLTGRKPY-DRSRPRGEQSL 657
+ GV++ LL G P+ D + R Q +
Sbjct: 209 ACGVILYILLVGYPPFWDEDQHRLYQQI 236
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 122/276 (44%), Gaps = 36/276 (13%)
Query: 448 IGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELI-GY 506
+G+G G VYKA+ +LA K+ +T S+ + ++ +E+ ++ H NIV+L+ +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEI-DILASCDHPNIVKLLDAF 103
Query: 507 CNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPI 566
E+ +L+ G +L E + + + V AL YL + I
Sbjct: 104 YYENNLWILIEFCAGGAVDAVML----ELERPLTESQIQVVCKQTLDALNYLH---DNKI 156
Query: 567 VHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELS--EGLLTAHGSGAPEF------ 618
+H + K+ NIL ++++D G++ + +T + + + APE
Sbjct: 157 IHRDLKAGNILFTLDGDIKLADFGVS----AKNTRXIQRRDSFIGTPYWMAPEVVMCETS 212
Query: 619 ESGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPS 678
+ Y ++DV+SLG+ ++E+ P+ P + + +++ P+
Sbjct: 213 KDRPYDYKADVWSLGITLIEMAEIEPPHHELNP-------------MRVLLKIAKSEPPT 259
Query: 679 LDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQ 714
L A ++ S F D + +C++ R S+++Q
Sbjct: 260 L--AQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQ 293
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/277 (20%), Positives = 121/277 (43%), Gaps = 38/277 (13%)
Query: 448 IGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELI-GY 506
+G+G G VYKA+ +LA K+ +T S+ + ++ +E+ ++ H NIV+L+ +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEI-DILASCDHPNIVKLLDAF 103
Query: 507 CNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPI 566
E+ +L+ G +L E + + + V AL YL + I
Sbjct: 104 YYENNLWILIEFCAGGAVDAVML----ELERPLTESQIQVVCKQTLDALNYLH---DNKI 156
Query: 567 VHGNFKSSNILLDEKLIVRVSDCGLAPL---------LFSGSTNELSEGLLTAHGSGAPE 617
+H + K+ NIL ++++D G++ F G+ ++ ++ S
Sbjct: 157 IHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCETS---- 212
Query: 618 FESGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDP 677
+ Y ++DV+SLG+ ++E+ P+ P + + +++ P
Sbjct: 213 -KDRPYDYKADVWSLGITLIEMAEIEPPHHELNP-------------MRVLLKIAKSEPP 258
Query: 678 SLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQ 714
+L A ++ S F D + +C++ R S+++Q
Sbjct: 259 TL--AQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQ 293
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 88/213 (41%), Gaps = 18/213 (8%)
Query: 448 IGEGLLGSVYKAEL------PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIV 501
+G G G VY+ ++ P +AVK L S+ Q + +FL A IS+ H NIV
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSE-QDELDFLMEALIISKFNHQNIV 123
Query: 502 ELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKK---FSWNIRIRVALGAARALQYL 558
IG + ++ + L L + + + VA A QYL
Sbjct: 124 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 183
Query: 559 QEVCEPPIVHGNFKSSNILLD---EKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGA 615
+E +H + + N LL + ++ D G+A ++ S +
Sbjct: 184 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 240
Query: 616 PE-FESGSYSCQSDVYSLGVVMLELLT-GRKPY 646
PE F G ++ ++D +S GV++ E+ + G PY
Sbjct: 241 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPY 273
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 89/214 (41%), Gaps = 18/214 (8%)
Query: 440 NSFSEGNFIGEGLLGSVYKA-ELPGGKLLAVKKLSNTVSQRQTDEEFLELA-STISRLRH 497
F G +GEG +V A EL + A+K L ++ ++ +SRL H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 498 GNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHS----DEEAHKKFSWNIRIRVALGAAR 553
V+L + + Y N L + DE + ++ I
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEI--------VS 143
Query: 554 ALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGS 613
AL+YL I+H + K NILL+E + ++++D G A +L S + +
Sbjct: 144 ALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQY 200
Query: 614 GAPE-FESGSYSCQSDVYSLGVVMLELLTGRKPY 646
+PE S S SD+++LG ++ +L+ G P+
Sbjct: 201 VSPELLTEKSASKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 89/213 (41%), Gaps = 18/213 (8%)
Query: 448 IGEGLLGSVYKAEL------PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIV 501
+G G G VY+ ++ P +AVK L S+ Q + +FL A IS+ H NIV
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSE-QDELDFLMEALIISKFNHQNIV 137
Query: 502 ELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKK---FSWNIRIRVALGAARALQYL 558
IG + ++ + L L + + + VA A QYL
Sbjct: 138 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 197
Query: 559 QEVCEPPIVHGNFKSSNILLD---EKLIVRVSDCGLAPLLF-SGSTNELSEGLLTAHGSG 614
+E +H + + N LL + ++ D G+A ++ +G + +L
Sbjct: 198 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMP 254
Query: 615 APEFESGSYSCQSDVYSLGVVMLELLT-GRKPY 646
F G ++ ++D +S GV++ E+ + G PY
Sbjct: 255 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPY 287
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 89/213 (41%), Gaps = 18/213 (8%)
Query: 448 IGEGLLGSVYKAEL------PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIV 501
+G G G VY+ ++ P +AVK L S+ Q + +FL A IS+ H NIV
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSE-QDELDFLMEALIISKFNHQNIV 114
Query: 502 ELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKK---FSWNIRIRVALGAARALQYL 558
IG + ++ + L L + + + VA A QYL
Sbjct: 115 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 174
Query: 559 QEVCEPPIVHGNFKSSNILLD---EKLIVRVSDCGLAPLLF-SGSTNELSEGLLTAHGSG 614
+E +H + + N LL + ++ D G+A ++ +G + +L
Sbjct: 175 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMP 231
Query: 615 APEFESGSYSCQSDVYSLGVVMLELLT-GRKPY 646
F G ++ ++D +S GV++ E+ + G PY
Sbjct: 232 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPY 264
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 68/160 (42%), Gaps = 17/160 (10%)
Query: 495 LRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSD----EEAHKKFSWNIRIRVALG 550
L H N+V+ G+ E L +Y L D + D E ++F + V
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV-- 118
Query: 551 AARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTA 610
YL + I H + K N+LLDE+ +++SD GLA + + L +
Sbjct: 119 ------YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGT 169
Query: 611 HGSGAPEF--ESGSYSCQSDVYSLGVVMLELLTGRKPYDR 648
APE ++ DV+S G+V+ +L G P+D+
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 68/160 (42%), Gaps = 17/160 (10%)
Query: 495 LRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSD----EEAHKKFSWNIRIRVALG 550
L H N+V+ G+ E L +Y L D + D E ++F + V
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV-- 118
Query: 551 AARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTA 610
YL + I H + K N+LLDE+ +++SD GLA + + L +
Sbjct: 119 ------YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGT 169
Query: 611 HGSGAPEF--ESGSYSCQSDVYSLGVVMLELLTGRKPYDR 648
APE ++ DV+S G+V+ +L G P+D+
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 68/160 (42%), Gaps = 17/160 (10%)
Query: 495 LRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSD----EEAHKKFSWNIRIRVALG 550
L H N+V+ G+ E L +Y L D + D E ++F + V
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV-- 119
Query: 551 AARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTA 610
YL + I H + K N+LLDE+ +++SD GLA + + L +
Sbjct: 120 ------YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGT 170
Query: 611 HGSGAPEF--ESGSYSCQSDVYSLGVVMLELLTGRKPYDR 648
APE ++ DV+S G+V+ +L G P+D+
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 68/160 (42%), Gaps = 17/160 (10%)
Query: 495 LRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSD----EEAHKKFSWNIRIRVALG 550
L H N+V+ G+ E L +Y L D + D E ++F + V
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV-- 119
Query: 551 AARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTA 610
YL + I H + K N+LLDE+ +++SD GLA + + L +
Sbjct: 120 ------YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170
Query: 611 HGSGAPEF--ESGSYSCQSDVYSLGVVMLELLTGRKPYDR 648
APE ++ DV+S G+V+ +L G P+D+
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 68/160 (42%), Gaps = 17/160 (10%)
Query: 495 LRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSD----EEAHKKFSWNIRIRVALG 550
L H N+V+ G+ E L +Y L D + D E ++F + V
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV-- 118
Query: 551 AARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTA 610
YL + I H + K N+LLDE+ +++SD GLA + + L +
Sbjct: 119 ------YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
Query: 611 HGSGAPEF--ESGSYSCQSDVYSLGVVMLELLTGRKPYDR 648
APE ++ DV+S G+V+ +L G P+D+
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 101/220 (45%), Gaps = 21/220 (9%)
Query: 435 LQQYTNSFSEGNFIGEGLLGSVY--KAELPGGK--LLAVKKLSNTVSQRQTDEEFLELAS 490
Q ++ + +G G G V K +L G + + +KK ++V+ L+ +
Sbjct: 16 FQGLSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKK--SSVTTTSNSGALLDEVA 73
Query: 491 TISRLRHGNIVELIGYCNEHGQHLLVYD-YGGNCTLHDLLHSDEEAHKKFSWNIRIRVAL 549
+ +L H NI++L + + + LV + Y G +++ +KFS + A+
Sbjct: 74 VLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEII-----LRQKFS---EVDAAV 125
Query: 550 GAARALQYLQEVCEPPIVHGNFKSSNILLDEK---LIVRVSDCGLAPLLFSGSTNELSEG 606
+ L + + IVH + K N+LL+ K ++++ D GL+ G ++ E
Sbjct: 126 IMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVG--GKMKER 183
Query: 607 LLTAHGSGAPEFESGSYSCQSDVYSLGVVMLELLTGRKPY 646
L TA+ APE Y + DV+S GV++ LL G P+
Sbjct: 184 LGTAYYI-APEVLRKKYDEKCDVWSCGVILYILLCGYPPF 222
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 91/207 (43%), Gaps = 15/207 (7%)
Query: 448 IGEGLLGSVYKAEL--PGGKLL--AVKKLS-NTVSQRQTDEEFLELASTISRLRHGNIVE 502
+G+G G V + E P GK + AVK L + +SQ + ++F+ + + L H N++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 503 LIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVC 562
L G ++ L LL + F R A+ A + YL+
Sbjct: 80 LYGVVLTPPMKMVTE----LAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLES-- 133
Query: 563 EPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNE-LSEGLLTAHGSGAPE-FES 620
+H + + N+LL + +V++ D GL L + + E APE ++
Sbjct: 134 -KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 192
Query: 621 GSYSCQSDVYSLGVVMLELLT-GRKPY 646
++S SD + GV + E+ T G++P+
Sbjct: 193 RTFSHASDTWMFGVTLWEMFTYGQEPW 219
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 68/160 (42%), Gaps = 17/160 (10%)
Query: 495 LRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSD----EEAHKKFSWNIRIRVALG 550
L H N+V+ G+ E L +Y L D + D E ++F + V
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV-- 118
Query: 551 AARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTA 610
YL + I H + K N+LLDE+ +++SD GLA + + L +
Sbjct: 119 ------YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGT 169
Query: 611 HGSGAPEF--ESGSYSCQSDVYSLGVVMLELLTGRKPYDR 648
APE ++ DV+S G+V+ +L G P+D+
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 68/160 (42%), Gaps = 17/160 (10%)
Query: 495 LRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSD----EEAHKKFSWNIRIRVALG 550
L H N+V+ G+ E L +Y L D + D E ++F + V
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV-- 118
Query: 551 AARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTA 610
YL + I H + K N+LLDE+ +++SD GLA + + L +
Sbjct: 119 ------YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
Query: 611 HGSGAPEF--ESGSYSCQSDVYSLGVVMLELLTGRKPYDR 648
APE ++ DV+S G+V+ +L G P+D+
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 68/160 (42%), Gaps = 17/160 (10%)
Query: 495 LRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSD----EEAHKKFSWNIRIRVALG 550
L H N+V+ G+ E L +Y L D + D E ++F + V
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV-- 118
Query: 551 AARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTA 610
YL + I H + K N+LLDE+ +++SD GLA + + L +
Sbjct: 119 ------YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
Query: 611 HGSGAPEF--ESGSYSCQSDVYSLGVVMLELLTGRKPYDR 648
APE ++ DV+S G+V+ +L G P+D+
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 68/160 (42%), Gaps = 17/160 (10%)
Query: 495 LRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSD----EEAHKKFSWNIRIRVALG 550
L H N+V+ G+ E L +Y L D + D E ++F + V
Sbjct: 60 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV-- 117
Query: 551 AARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTA 610
YL + I H + K N+LLDE+ +++SD GLA + + L +
Sbjct: 118 ------YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 168
Query: 611 HGSGAPEF--ESGSYSCQSDVYSLGVVMLELLTGRKPYDR 648
APE ++ DV+S G+V+ +L G P+D+
Sbjct: 169 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 208
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 68/160 (42%), Gaps = 17/160 (10%)
Query: 495 LRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSD----EEAHKKFSWNIRIRVALG 550
L H N+V+ G+ E L +Y L D + D E ++F + V
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV-- 119
Query: 551 AARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTA 610
YL + I H + K N+LLDE+ +++SD GLA + + L +
Sbjct: 120 ------YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170
Query: 611 HGSGAPEF--ESGSYSCQSDVYSLGVVMLELLTGRKPYDR 648
APE ++ DV+S G+V+ +L G P+D+
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 68/160 (42%), Gaps = 17/160 (10%)
Query: 495 LRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSD----EEAHKKFSWNIRIRVALG 550
L H N+V+ G+ E L +Y L D + D E ++F + V
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV-- 119
Query: 551 AARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTA 610
YL + I H + K N+LLDE+ +++SD GLA + + L +
Sbjct: 120 ------YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170
Query: 611 HGSGAPEF--ESGSYSCQSDVYSLGVVMLELLTGRKPYDR 648
APE ++ DV+S G+V+ +L G P+D+
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 68/160 (42%), Gaps = 17/160 (10%)
Query: 495 LRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSD----EEAHKKFSWNIRIRVALG 550
L H N+V+ G+ E L +Y L D + D E ++F + V
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV-- 119
Query: 551 AARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTA 610
YL + I H + K N+LLDE+ +++SD GLA + + L +
Sbjct: 120 ------YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170
Query: 611 HGSGAPEF--ESGSYSCQSDVYSLGVVMLELLTGRKPYDR 648
APE ++ DV+S G+V+ +L G P+D+
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 68/160 (42%), Gaps = 17/160 (10%)
Query: 495 LRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSD----EEAHKKFSWNIRIRVALG 550
L H N+V+ G+ E L +Y L D + D E ++F + V
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV-- 118
Query: 551 AARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTA 610
YL + I H + K N+LLDE+ +++SD GLA + + L +
Sbjct: 119 ------YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
Query: 611 HGSGAPEF--ESGSYSCQSDVYSLGVVMLELLTGRKPYDR 648
APE ++ DV+S G+V+ +L G P+D+
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 91/207 (43%), Gaps = 15/207 (7%)
Query: 448 IGEGLLGSVYKAEL--PGGKLL--AVKKLS-NTVSQRQTDEEFLELASTISRLRHGNIVE 502
+G+G G V + E P GK + AVK L + +SQ + ++F+ + + L H N++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 503 LIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVC 562
L G ++ L LL + F R A+ A + YL+
Sbjct: 76 LYGVVLTPPMKMVT----ELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLES-- 129
Query: 563 EPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNE-LSEGLLTAHGSGAPE-FES 620
+H + + N+LL + +V++ D GL L + + E APE ++
Sbjct: 130 -KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKT 188
Query: 621 GSYSCQSDVYSLGVVMLELLT-GRKPY 646
++S SD + GV + E+ T G++P+
Sbjct: 189 RTFSHASDTWMFGVTLWEMFTYGQEPW 215
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 91/207 (43%), Gaps = 15/207 (7%)
Query: 448 IGEGLLGSVYKAEL--PGGKLL--AVKKLS-NTVSQRQTDEEFLELASTISRLRHGNIVE 502
+G+G G V + E P GK + AVK L + +SQ + ++F+ + + L H N++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 503 LIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVC 562
L G ++ L LL + F R A+ A + YL+
Sbjct: 86 LYGVVLTPPMKMVTE----LAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLES-- 139
Query: 563 EPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNE-LSEGLLTAHGSGAPE-FES 620
+H + + N+LL + +V++ D GL L + + E APE ++
Sbjct: 140 -KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKT 198
Query: 621 GSYSCQSDVYSLGVVMLELLT-GRKPY 646
++S SD + GV + E+ T G++P+
Sbjct: 199 RTFSHASDTWMFGVTLWEMFTYGQEPW 225
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 88/206 (42%), Gaps = 23/206 (11%)
Query: 448 IGEGLLGSVYKAE-LPGGKLLAVKKLSNTVSQR-----QTDEEFLELASTISRLRHGNIV 501
+G G G V+ G+ A+K L + R T++E L L S + H I+
Sbjct: 14 LGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLML----SIVTHPFII 69
Query: 502 ELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEV 561
+ G + Q ++ DY L LL + +F + A AL+YL
Sbjct: 70 RMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQ----RFPNPVAKFYAAEVCLALEYLHS- 124
Query: 562 CEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFESG 621
I++ + K NILLD+ ++++D G F+ +++ L APE S
Sbjct: 125 --KDIIYRDLKPENILLDKNGHIKITDFG-----FAKYVPDVTYXLCGTPDYIAPEVVST 177
Query: 622 S-YSCQSDVYSLGVVMLELLTGRKPY 646
Y+ D +S G+++ E+L G P+
Sbjct: 178 KPYNKSIDWWSFGILIYEMLAGYTPF 203
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 86/207 (41%), Gaps = 21/207 (10%)
Query: 448 IGEGLLGSVYKAELPG-GKLLAVKKLSNTVSQRQTDEEFLELASTISRL--RHGNIVELI 504
+G+G G V+ AE + A+K L V D E + + L H + +
Sbjct: 25 LGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMF 84
Query: 505 GYCNEHGQHLLVYDY--GGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVC 562
V +Y GG DL++ + HK F + R AA + LQ +
Sbjct: 85 CTFQTKENLFFVMEYLNGG-----DLMYHIQSCHK-FDLS---RATFYAAEIILGLQFLH 135
Query: 563 EPPIVHGNFKSSNILLDEKLIVRVSDCGLAP--LLFSGSTNELSEGLLTAHGSGAPEFES 620
IV+ + K NILLD+ ++++D G+ +L TN APE
Sbjct: 136 SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFC----GTPDYIAPEILL 191
Query: 621 G-SYSCQSDVYSLGVVMLELLTGRKPY 646
G Y+ D +S GV++ E+L G+ P+
Sbjct: 192 GQKYNHSVDWWSFGVLLYEMLIGQSPF 218
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 101/215 (46%), Gaps = 37/215 (17%)
Query: 448 IGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYC 507
IG+G G V++ + G ++ AVK S+ + E E+ T+ LRH NI+ I
Sbjct: 50 IGKGRFGEVWRGKWRGEEV-AVKIFSSREERSWFREA--EIYQTVM-LRHENILGFIAAD 105
Query: 508 NEHG----QHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIR--IRVALGAARALQYLQ-E 560
N+ Q LV DY + +L D L+ +++ + I++AL A L +L E
Sbjct: 106 NKDNGTWTQLWLVSDYHEHGSLFDYLN-------RYTVTVEGMIKLALSTASGLAHLHME 158
Query: 561 VC----EPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG-- 614
+ +P I H + KS NIL+ + ++D GLA + +T+ + + H G
Sbjct: 159 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHDSATDTID--IAPNHRVGTK 215
Query: 615 ---APEFESGSYSCQ-------SDVYSLGVVMLEL 639
APE S + + +D+Y++G+V E+
Sbjct: 216 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 68/160 (42%), Gaps = 17/160 (10%)
Query: 495 LRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSD----EEAHKKFSWNIRIRVALG 550
L H N+V+ G+ E L +Y L D + D E ++F + V
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV-- 118
Query: 551 AARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTA 610
YL + I H + K N+LLDE+ +++SD GLA + + L +
Sbjct: 119 ------YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGT 169
Query: 611 HGSGAPEF--ESGSYSCQSDVYSLGVVMLELLTGRKPYDR 648
APE ++ DV+S G+V+ +L G P+D+
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 94/232 (40%), Gaps = 32/232 (13%)
Query: 434 SLQQYTNSFSEGNFIGEGLLGSVYKA-ELPGGKLLAVKKLSNTVSQRQTDEEFLELAST- 491
S + ++ +G G+ V + P K AVK + T + EE EL
Sbjct: 11 STHGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREAT 70
Query: 492 ---ISRLR----HGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIR 544
+ LR H NI++L + LV+D L D L +K + I
Sbjct: 71 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKI- 129
Query: 545 IRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELS 604
+R L AL L IVH + K NILLD+ + ++++D G + L G
Sbjct: 130 MRALLEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPG------ 177
Query: 605 EGLLTAHGSG---APEFESGS-------YSCQSDVYSLGVVMLELLTGRKPY 646
E L + G+ APE S Y + D++S GV+M LL G P+
Sbjct: 178 EKLRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 68/160 (42%), Gaps = 17/160 (10%)
Query: 495 LRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSD----EEAHKKFSWNIRIRVALG 550
L H N+V+ G+ E L +Y L D + D E ++F + V
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV-- 119
Query: 551 AARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTA 610
YL + I H + K N+LLDE+ +++SD GLA + + L +
Sbjct: 120 ------YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170
Query: 611 HGSGAPEF--ESGSYSCQSDVYSLGVVMLELLTGRKPYDR 648
APE ++ DV+S G+V+ +L G P+D+
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 101/215 (46%), Gaps = 37/215 (17%)
Query: 448 IGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYC 507
IG+G G V++ + G ++ AVK S+ + E E+ T+ LRH NI+ I
Sbjct: 12 IGKGRFGEVWRGKWRGEEV-AVKIFSSREERSWFREA--EIYQTVM-LRHENILGFIAAD 67
Query: 508 NEHG----QHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIR--IRVALGAARALQYLQ-E 560
N+ Q LV DY + +L D L+ +++ + I++AL A L +L E
Sbjct: 68 NKDNGTWTQLWLVSDYHEHGSLFDYLN-------RYTVTVEGMIKLALSTASGLAHLHME 120
Query: 561 VC----EPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG-- 614
+ +P I H + KS NIL+ + ++D GLA + +T+ + + H G
Sbjct: 121 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHDSATDTID--IAPNHRVGTK 177
Query: 615 ---APEFESGSYSCQ-------SDVYSLGVVMLEL 639
APE S + + +D+Y++G+V E+
Sbjct: 178 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 91/212 (42%), Gaps = 36/212 (16%)
Query: 448 IGEGLLGSV----YKAELPG-GKLLAVKKLSNTV--SQRQTDEEFLELASTISRLRHGNI 500
+GEG G V Y G G+++AVK L R + +E+ T L H +I
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRT---LYHEHI 72
Query: 501 VELIGYCNEHGQH--LLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYL 558
V+ G C + G+ LV +Y +L D L R +G A+ L +
Sbjct: 73 VKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL---------------PRHCVGLAQLLLFA 117
Query: 559 QEVCE-------PPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSG-STNELSEGLLTA 610
Q++CE +H + N+LLD +V++ D GLA + G + E +
Sbjct: 118 QQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSP 177
Query: 611 HGSGAPE-FESGSYSCQSDVYSLGVVMLELLT 641
APE + + SDV+S GV + ELLT
Sbjct: 178 VFWYAPECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 91/212 (42%), Gaps = 36/212 (16%)
Query: 448 IGEGLLGSV----YKAELPG-GKLLAVKKLSNTV--SQRQTDEEFLELASTISRLRHGNI 500
+GEG G V Y G G+++AVK L R + +E+ T L H +I
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRT---LYHEHI 73
Query: 501 VELIGYCNEHGQH--LLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYL 558
V+ G C + G+ LV +Y +L D L R +G A+ L +
Sbjct: 74 VKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL---------------PRHCVGLAQLLLFA 118
Query: 559 QEVCE-------PPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSG-STNELSEGLLTA 610
Q++CE +H + N+LLD +V++ D GLA + G + E +
Sbjct: 119 QQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSP 178
Query: 611 HGSGAPE-FESGSYSCQSDVYSLGVVMLELLT 641
APE + + SDV+S GV + ELLT
Sbjct: 179 VFWYAPECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 68/160 (42%), Gaps = 17/160 (10%)
Query: 495 LRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSD----EEAHKKFSWNIRIRVALG 550
L H N+V+ G+ E L +Y L D + D E ++F + V
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV-- 118
Query: 551 AARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTA 610
YL + I H + K N+LLDE+ +++SD GLA + + L +
Sbjct: 119 ------YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
Query: 611 HGSGAPEF--ESGSYSCQSDVYSLGVVMLELLTGRKPYDR 648
APE ++ DV+S G+V+ +L G P+D+
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 90/210 (42%), Gaps = 32/210 (15%)
Query: 448 IGEGLLGSV----YKAELPG-GKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVE 502
+GEG G V Y G G+++AVK L + E+ + L H +I++
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEI-DILRTLYHEHIIK 97
Query: 503 LIGYCNEHGQH--LLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQE 560
G C + G LV +Y +L D L R ++G A+ L + Q+
Sbjct: 98 YKGCCEDAGAASLQLVMEYVPLGSLRDYL---------------PRHSIGLAQLLLFAQQ 142
Query: 561 VCE-------PPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSG-STNELSEGLLTAHG 612
+CE +H + + N+LLD +V++ D GLA + G + E +
Sbjct: 143 ICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVF 202
Query: 613 SGAPE-FESGSYSCQSDVYSLGVVMLELLT 641
APE + + SDV+S GV + ELLT
Sbjct: 203 WYAPECLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 68/160 (42%), Gaps = 17/160 (10%)
Query: 495 LRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSD----EEAHKKFSWNIRIRVALG 550
L H N+V+ G+ E L +Y L D + D E ++F + V
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV-- 118
Query: 551 AARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTA 610
YL + I H + K N+LLDE+ +++SD GLA + + L +
Sbjct: 119 ------YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
Query: 611 HGSGAPEF--ESGSYSCQSDVYSLGVVMLELLTGRKPYDR 648
APE ++ DV+S G+V+ +L G P+D+
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 82/207 (39%), Gaps = 17/207 (8%)
Query: 448 IGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYC 507
+GEG G V A + K+ + E + + L H N+V+ G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGHR 74
Query: 508 NEHGQHLLVYDYGGNCTLHDLLHSD----EEAHKKFSWNIRIRVALGAARALQYLQEVCE 563
E L +Y L D + D E ++F + V YL +
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV--------YLHGIG- 125
Query: 564 PPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEF--ESG 621
I H + K N+LLDE+ +++SD GLA + + L + APE
Sbjct: 126 --ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 622 SYSCQSDVYSLGVVMLELLTGRKPYDR 648
++ DV+S G+V+ +L G P+D+
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 68/160 (42%), Gaps = 17/160 (10%)
Query: 495 LRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSD----EEAHKKFSWNIRIRVALG 550
L H N+V+ G+ E L +Y L D + D E ++F + V
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV-- 119
Query: 551 AARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTA 610
YL + I H + K N+LLDE+ +++SD GLA + + L +
Sbjct: 120 ------YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170
Query: 611 HGSGAPEF--ESGSYSCQSDVYSLGVVMLELLTGRKPYDR 648
APE ++ DV+S G+V+ +L G P+D+
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 68/160 (42%), Gaps = 17/160 (10%)
Query: 495 LRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSD----EEAHKKFSWNIRIRVALG 550
L H N+V+ G+ E L +Y L D + D E ++F + V
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV-- 118
Query: 551 AARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTA 610
YL + I H + K N+LLDE+ +++SD GLA + + L +
Sbjct: 119 ------YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
Query: 611 HGSGAPEF--ESGSYSCQSDVYSLGVVMLELLTGRKPYDR 648
APE ++ DV+S G+V+ +L G P+D+
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 101/215 (46%), Gaps = 37/215 (17%)
Query: 448 IGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYC 507
IG+G G V++ + G ++ AVK S+ + E E+ T+ LRH NI+ I
Sbjct: 14 IGKGRFGEVWRGKWRGEEV-AVKIFSSREERSWFREA--EIYQTVM-LRHENILGFIAAD 69
Query: 508 NEHG----QHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIR--IRVALGAARALQYLQ-E 560
N+ Q LV DY + +L D L+ +++ + I++AL A L +L E
Sbjct: 70 NKDNGTWTQLWLVSDYHEHGSLFDYLN-------RYTVTVEGMIKLALSTASGLAHLHME 122
Query: 561 VC----EPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG-- 614
+ +P I H + KS NIL+ + ++D GLA + +T+ + + H G
Sbjct: 123 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHDSATDTID--IAPNHRVGTK 179
Query: 615 ---APEFESGSYSCQ-------SDVYSLGVVMLEL 639
APE S + + +D+Y++G+V E+
Sbjct: 180 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 101/215 (46%), Gaps = 37/215 (17%)
Query: 448 IGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYC 507
IG+G G V++ + G ++ AVK S+ + E E+ T+ LRH NI+ I
Sbjct: 17 IGKGRFGEVWRGKWRGEEV-AVKIFSSREERSWFREA--EIYQTVM-LRHENILGFIAAD 72
Query: 508 NEHG----QHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIR--IRVALGAARALQYLQ-E 560
N+ Q LV DY + +L D L+ +++ + I++AL A L +L E
Sbjct: 73 NKDNGTWTQLWLVSDYHEHGSLFDYLN-------RYTVTVEGMIKLALSTASGLAHLHME 125
Query: 561 VC----EPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG-- 614
+ +P I H + KS NIL+ + ++D GLA + +T+ + + H G
Sbjct: 126 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHDSATDTID--IAPNHRVGTK 182
Query: 615 ---APEFESGSYSCQ-------SDVYSLGVVMLEL 639
APE S + + +D+Y++G+V E+
Sbjct: 183 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 68/160 (42%), Gaps = 17/160 (10%)
Query: 495 LRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSD----EEAHKKFSWNIRIRVALG 550
L H N+V+ G+ E L +Y L D + D E ++F + V
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV-- 118
Query: 551 AARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTA 610
YL + I H + K N+LLDE+ +++SD GLA + + L +
Sbjct: 119 ------YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
Query: 611 HGSGAPEF--ESGSYSCQSDVYSLGVVMLELLTGRKPYDR 648
APE ++ DV+S G+V+ +L G P+D+
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 101/215 (46%), Gaps = 37/215 (17%)
Query: 448 IGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYC 507
IG+G G V++ + G ++ AVK S+ + E E+ T+ LRH NI+ I
Sbjct: 37 IGKGRFGEVWRGKWRGEEV-AVKIFSSREERSWFREA--EIYQTVM-LRHENILGFIAAD 92
Query: 508 NEHG----QHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIR--IRVALGAARALQYLQ-E 560
N+ Q LV DY + +L D L+ +++ + I++AL A L +L E
Sbjct: 93 NKDNGTWTQLWLVSDYHEHGSLFDYLN-------RYTVTVEGMIKLALSTASGLAHLHME 145
Query: 561 VC----EPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG-- 614
+ +P I H + KS NIL+ + ++D GLA + +T+ + + H G
Sbjct: 146 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHDSATDTID--IAPNHRVGTK 202
Query: 615 ---APEFESGSYSCQ-------SDVYSLGVVMLEL 639
APE S + + +D+Y++G+V E+
Sbjct: 203 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 93/210 (44%), Gaps = 33/210 (15%)
Query: 448 IGEGLLGSVYKA-ELPGGKLLAVKKLS----NTVSQRQTDEEFLELASTISRLRHGNIVE 502
+G G GSV A + G +AVKKLS + + ++T E + ++H N++
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYREL----RLLKHMKHENVIG 81
Query: 503 LIGYCN-----EHGQHLLVYDYGGNCTLHDLLHSDE--EAHKKFSWNIRIRVALGAARAL 555
L+ E + + + L++++ + + H +F + R L
Sbjct: 82 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGL 134
Query: 556 QYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGA 615
+Y+ I+H + K SN+ ++E +++ D GLA T++ G + A
Sbjct: 135 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMAGFVATRWYRA 186
Query: 616 PEFESG--SYSCQSDVYSLGVVMLELLTGR 643
PE Y+ D++S+G +M ELLTGR
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 91/207 (43%), Gaps = 15/207 (7%)
Query: 448 IGEGLLGSVYKAEL--PGGKLL--AVKKLS-NTVSQRQTDEEFLELASTISRLRHGNIVE 502
+G+G G V + E P GK + AVK L + +SQ + ++F+ + + L H N++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 503 LIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVC 562
L G ++ L LL + F R A+ A + YL+
Sbjct: 76 LYGVVLTPPMKMVT----ELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLES-- 129
Query: 563 EPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNE-LSEGLLTAHGSGAPE-FES 620
+H + + N+LL + +V++ D GL L + + E APE ++
Sbjct: 130 -KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 188
Query: 621 GSYSCQSDVYSLGVVMLELLT-GRKPY 646
++S SD + GV + E+ T G++P+
Sbjct: 189 RTFSHASDTWMFGVTLWEMFTYGQEPW 215
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 91/207 (43%), Gaps = 15/207 (7%)
Query: 448 IGEGLLGSVYKAEL--PGGKLL--AVKKLS-NTVSQRQTDEEFLELASTISRLRHGNIVE 502
+G+G G V + E P GK + AVK L + +SQ + ++F+ + + L H N++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 503 LIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVC 562
L G ++ L LL + F R A+ A + YL+
Sbjct: 76 LYGVVLTPPMKMVT----ELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLES-- 129
Query: 563 EPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNE-LSEGLLTAHGSGAPE-FES 620
+H + + N+LL + +V++ D GL L + + E APE ++
Sbjct: 130 -KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 188
Query: 621 GSYSCQSDVYSLGVVMLELLT-GRKPY 646
++S SD + GV + E+ T G++P+
Sbjct: 189 RTFSHASDTWMFGVTLWEMFTYGQEPW 215
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 101/215 (46%), Gaps = 37/215 (17%)
Query: 448 IGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYC 507
IG+G G V++ + G ++ AVK S+ + E E+ T+ LRH NI+ I
Sbjct: 11 IGKGRFGEVWRGKWRGEEV-AVKIFSSREERSWFREA--EIYQTVM-LRHENILGFIAAD 66
Query: 508 NEHG----QHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIR--IRVALGAARALQYLQ-E 560
N+ Q LV DY + +L D L+ +++ + I++AL A L +L E
Sbjct: 67 NKDNGTWTQLWLVSDYHEHGSLFDYLN-------RYTVTVEGMIKLALSTASGLAHLHME 119
Query: 561 VC----EPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG-- 614
+ +P I H + KS NIL+ + ++D GLA + +T+ + + H G
Sbjct: 120 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHDSATDTID--IAPNHRVGTK 176
Query: 615 ---APEFESGSYSCQ-------SDVYSLGVVMLEL 639
APE S + + +D+Y++G+V E+
Sbjct: 177 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 91/207 (43%), Gaps = 15/207 (7%)
Query: 448 IGEGLLGSVYKAEL--PGGKLL--AVKKLS-NTVSQRQTDEEFLELASTISRLRHGNIVE 502
+G+G G V + E P GK + AVK L + +SQ + ++F+ + + L H N++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 503 LIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVC 562
L G ++ L LL + F R A+ A + YL+
Sbjct: 86 LYGVVLTPPMKMVTE----LAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLES-- 139
Query: 563 EPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNE-LSEGLLTAHGSGAPE-FES 620
+H + + N+LL + +V++ D GL L + + E APE ++
Sbjct: 140 -KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 198
Query: 621 GSYSCQSDVYSLGVVMLELLT-GRKPY 646
++S SD + GV + E+ T G++P+
Sbjct: 199 RTFSHASDTWMFGVTLWEMFTYGQEPW 225
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 92/228 (40%), Gaps = 32/228 (14%)
Query: 438 YTNSFSEGNFIGEGLLGSVYKA-ELPGGKLLAVKKLSNTVSQRQTDEEFLELAST----I 492
+ ++ +G G+ V + P K AVK + T + EE EL +
Sbjct: 2 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEV 61
Query: 493 SRLR----HGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVA 548
LR H NI++L + LV+D L D L +K + I +R
Sbjct: 62 DILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKI-MRAL 120
Query: 549 LGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLL 608
L AL L IVH + K NILLD+ + ++++D G + L G E L
Sbjct: 121 LEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPG------EKLR 168
Query: 609 TAHGSG---APEFESGS-------YSCQSDVYSLGVVMLELLTGRKPY 646
G+ APE S Y + D++S GV+M LL G P+
Sbjct: 169 EVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 216
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 35/211 (16%)
Query: 448 IGEGLLGSVYKA-ELPGGKLLAVKKLS----NTVSQRQTDEEFLELASTISRLRHGNIVE 502
+G G GSV A + G +AVKKLS + + ++T E + ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYREL----RLLKHMKHENVIG 85
Query: 503 LIGY------CNEHGQHLLVYDYGGNCTLHDLLHSDE--EAHKKFSWNIRIRVALGAARA 554
L+ E LV G L++++ + + H +F + R
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQF-------LIYQILRG 137
Query: 555 LQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG 614
L+Y+ I+H + K SN+ ++E +++ D GLA T++ G +
Sbjct: 138 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMAGFVATRWYR 189
Query: 615 APEFESG--SYSCQSDVYSLGVVMLELLTGR 643
APE Y+ D++S+G +M ELLTGR
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 91/207 (43%), Gaps = 15/207 (7%)
Query: 448 IGEGLLGSVYKAEL--PGGKLL--AVKKLS-NTVSQRQTDEEFLELASTISRLRHGNIVE 502
+G+G G V + E P GK + AVK L + +SQ + ++F+ + + L H N++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 503 LIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVC 562
L G ++ L LL + F R A+ A + YL+
Sbjct: 80 LYGVVLTPPMKMVT----ELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLES-- 133
Query: 563 EPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNE-LSEGLLTAHGSGAPE-FES 620
+H + + N+LL + +V++ D GL L + + E APE ++
Sbjct: 134 -KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 192
Query: 621 GSYSCQSDVYSLGVVMLELLT-GRKPY 646
++S SD + GV + E+ T G++P+
Sbjct: 193 RTFSHASDTWMFGVTLWEMFTYGQEPW 219
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 35/211 (16%)
Query: 448 IGEGLLGSVYKA-ELPGGKLLAVKKLS----NTVSQRQTDEEFLELASTISRLRHGNIVE 502
+G G GSV A + G +AVKKLS + + ++T E + ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYREL----RLLKHMKHENVIG 85
Query: 503 LIGY------CNEHGQHLLVYDYGGNCTLHDLLHSDE--EAHKKFSWNIRIRVALGAARA 554
L+ E LV G L++++ + + H +F + R
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQF-------LIYQILRG 137
Query: 555 LQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG 614
L+Y+ I+H + K SN+ ++E +++ D GLA T++ G +
Sbjct: 138 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMAGFVATRWYR 189
Query: 615 APEFESG--SYSCQSDVYSLGVVMLELLTGR 643
APE Y+ D++S+G +M ELLTGR
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 96/207 (46%), Gaps = 21/207 (10%)
Query: 448 IGEGLLGSVY--KAELPGGK--LLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVEL 503
+G G G V K +L G + + +KK S T + L+ + + +L H NI++L
Sbjct: 12 LGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSG--ALLDEVAVLKQLDHPNIMKL 69
Query: 504 IGYCNEHGQHLLVYD-YGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVC 562
+ + + LV + Y G +++ +KFS + A+ + L +
Sbjct: 70 YEFFEDKRNYYLVMEVYRGGELFDEII-----LRQKFS---EVDAAVIMKQVLSGTTYLH 121
Query: 563 EPPIVHGNFKSSNILLDEK---LIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE 619
+ IVH + K N+LL+ K ++++ D GL+ G ++ E L TA+ APE
Sbjct: 122 KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVG--GKMKERLGTAYYI-APEVL 178
Query: 620 SGSYSCQSDVYSLGVVMLELLTGRKPY 646
Y + DV+S GV++ LL G P+
Sbjct: 179 RKKYDEKCDVWSCGVILYILLCGYPPF 205
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 93/232 (40%), Gaps = 32/232 (13%)
Query: 434 SLQQYTNSFSEGNFIGEGLLGSVYKA-ELPGGKLLAVKKLSNTVSQRQTDEEFLELAST- 491
S + ++ +G G+ V + P K AVK + T + EE EL
Sbjct: 11 STHGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREAT 70
Query: 492 ---ISRLR----HGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIR 544
+ LR H NI++L + LV+D L D L +K + I
Sbjct: 71 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKI- 129
Query: 545 IRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELS 604
+R L AL L IVH + K NILLD+ + ++++D G + L G
Sbjct: 130 MRALLEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPG------ 177
Query: 605 EGLLTAHGSG---APEFESGS-------YSCQSDVYSLGVVMLELLTGRKPY 646
E L G+ APE S Y + D++S GV+M LL G P+
Sbjct: 178 EKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 93/209 (44%), Gaps = 15/209 (7%)
Query: 442 FSEGNFIGEGLLGSVYKAELPGGKL-LAVKKLSNTVSQRQTDEEFLELASTISRLRHGNI 500
++ ++IGEG G V A K+ +A+KK+S Q E+ + R RH NI
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREI-KILLRFRHENI 85
Query: 501 VELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQE 560
+ + N+ + + + DL+ +D K + + L+ L+
Sbjct: 86 IGI----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKY 141
Query: 561 VCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG----AP 616
+ ++H + K SN+LL+ +++ D GLA + + G LT + + AP
Sbjct: 142 IHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAP 198
Query: 617 E--FESGSYSCQSDVYSLGVVMLELLTGR 643
E S Y+ D++S+G ++ E+L+ R
Sbjct: 199 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 88/214 (41%), Gaps = 18/214 (8%)
Query: 440 NSFSEGNFIGEGLLGSVYKA-ELPGGKLLAVKKLSNTVSQRQTDEEFLELA-STISRLRH 497
F G +GEG +V A EL + A+K L ++ ++ +SRL H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 498 GNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHS----DEEAHKKFSWNIRIRVALGAAR 553
V+L + + Y N L + DE + ++ I
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI--------VS 143
Query: 554 ALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGS 613
AL+YL I+H + K NILL+E + ++++D G A +L S + +
Sbjct: 144 ALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 614 GAPE-FESGSYSCQSDVYSLGVVMLELLTGRKPY 646
+PE S SD+++LG ++ +L+ G P+
Sbjct: 201 VSPELLTEKSAXKSSDLWALGCIIYQLVAGLPPF 234
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 93/209 (44%), Gaps = 15/209 (7%)
Query: 442 FSEGNFIGEGLLGSVYKAELPGGKL-LAVKKLSNTVSQRQTDEEFLELASTISRLRHGNI 500
++ ++IGEG G V A K+ +A+KK+S Q E+ + R RH NI
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREI-KILLRFRHENI 83
Query: 501 VELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQE 560
+ + N+ + + + DL+ +D K + + L+ L+
Sbjct: 84 IGI----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKY 139
Query: 561 VCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG----AP 616
+ ++H + K SN+LL+ +++ D GLA + + G LT + + AP
Sbjct: 140 IHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAP 196
Query: 617 E--FESGSYSCQSDVYSLGVVMLELLTGR 643
E S Y+ D++S+G ++ E+L+ R
Sbjct: 197 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 93/209 (44%), Gaps = 15/209 (7%)
Query: 442 FSEGNFIGEGLLGSVYKAELPGGKL-LAVKKLSNTVSQRQTDEEFLELASTISRLRHGNI 500
++ ++IGEG G V A K+ +A+KK+S Q E+ + R RH NI
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREI-KILLRFRHENI 83
Query: 501 VELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQE 560
+ + N+ + + + DL+ +D K + + L+ L+
Sbjct: 84 IGI----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKY 139
Query: 561 VCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG----AP 616
+ ++H + K SN+LL+ +++ D GLA + + G LT + + AP
Sbjct: 140 IHSANVLHRDLKPSNLLLNTTXDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAP 196
Query: 617 E--FESGSYSCQSDVYSLGVVMLELLTGR 643
E S Y+ D++S+G ++ E+L+ R
Sbjct: 197 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 93/209 (44%), Gaps = 15/209 (7%)
Query: 442 FSEGNFIGEGLLGSVYKAELPGGKL-LAVKKLSNTVSQRQTDEEFLELASTISRLRHGNI 500
++ ++IGEG G V A K+ +A+KK+S Q E+ + R RH NI
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREI-KILLRFRHENI 103
Query: 501 VELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQE 560
+ + N+ + + + DL+ +D K + + L+ L+
Sbjct: 104 IGI----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKY 159
Query: 561 VCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG----AP 616
+ ++H + K SN+LL+ +++ D GLA + + G LT + + AP
Sbjct: 160 IHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAP 216
Query: 617 E--FESGSYSCQSDVYSLGVVMLELLTGR 643
E S Y+ D++S+G ++ E+L+ R
Sbjct: 217 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 93/209 (44%), Gaps = 15/209 (7%)
Query: 442 FSEGNFIGEGLLGSVYKAELPGGKL-LAVKKLSNTVSQRQTDEEFLELASTISRLRHGNI 500
++ ++IGEG G V A K+ +A+KK+S Q E+ + R RH NI
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREI-KILLRFRHENI 87
Query: 501 VELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQE 560
+ + N+ + + + DL+ +D K + + L+ L+
Sbjct: 88 IGI----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQILRGLKY 143
Query: 561 VCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG----AP 616
+ ++H + K SN+LL+ +++ D GLA + + G LT + + AP
Sbjct: 144 IHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAP 200
Query: 617 E--FESGSYSCQSDVYSLGVVMLELLTGR 643
E S Y+ D++S+G ++ E+L+ R
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 93/209 (44%), Gaps = 15/209 (7%)
Query: 442 FSEGNFIGEGLLGSVYKAELPGGKL-LAVKKLSNTVSQRQTDEEFLELASTISRLRHGNI 500
++ ++IGEG G V A K+ +A+KK+S Q E+ + R RH NI
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREI-KILLRFRHENI 83
Query: 501 VELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQE 560
+ + N+ + + + DL+ +D K + + L+ L+
Sbjct: 84 IGI----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKY 139
Query: 561 VCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG----AP 616
+ ++H + K SN+LL+ +++ D GLA + + G LT + + AP
Sbjct: 140 IHSANVLHRDLKPSNLLLNTTXDLKIXDFGLARV---ADPDHDHTGFLTEYVATRWYRAP 196
Query: 617 E--FESGSYSCQSDVYSLGVVMLELLTGR 643
E S Y+ D++S+G ++ E+L+ R
Sbjct: 197 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 121/276 (43%), Gaps = 32/276 (11%)
Query: 447 FIGE-GLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELI- 504
IGE G G VYKA+ +LA K+ +T S+ + ++ +E+ ++ H NIV+L+
Sbjct: 16 IIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEI-DILASCDHPNIVKLLD 74
Query: 505 GYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEP 564
+ E+ +L+ G +L E + + + V AL YL +
Sbjct: 75 AFYYENNLWILIEFCAGGAVDAVML----ELERPLTESQIQVVCKQTLDALNYLH---DN 127
Query: 565 PIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEF------ 618
I+H + K+ NIL ++++D G++ + + + + + APE
Sbjct: 128 KIIHRDLKAGNILFTLDGDIKLADFGVSA-KNTRTXIQRRDSFIGTPYWMAPEVVMCETS 186
Query: 619 ESGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPS 678
+ Y ++DV+SLG+ ++E+ P+ P + + +++ P+
Sbjct: 187 KDRPYDYKADVWSLGITLIEMAEIEPPHHELNP-------------MRVLLKIAKSEPPT 233
Query: 679 LDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQ 714
L A ++ S F D + +C++ R S+++Q
Sbjct: 234 L--AQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQ 267
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 93/209 (44%), Gaps = 15/209 (7%)
Query: 442 FSEGNFIGEGLLGSVYKAELPGGKL-LAVKKLSNTVSQRQTDEEFLELASTISRLRHGNI 500
++ ++IGEG G V A K+ +A+KK+S Q E+ + R RH NI
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREI-KILLRFRHENI 81
Query: 501 VELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQE 560
+ + N+ + + + DL+ +D K + + L+ L+
Sbjct: 82 IGI----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKY 137
Query: 561 VCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG----AP 616
+ ++H + K SN+LL+ +++ D GLA + + G LT + + AP
Sbjct: 138 IHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAP 194
Query: 617 E--FESGSYSCQSDVYSLGVVMLELLTGR 643
E S Y+ D++S+G ++ E+L+ R
Sbjct: 195 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 93/210 (44%), Gaps = 33/210 (15%)
Query: 448 IGEGLLGSVYKA-ELPGGKLLAVKKLS----NTVSQRQTDEEFLELASTISRLRHGNIVE 502
+G G GSV A + G +AVKKLS + + ++T E + ++H N++
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYREL----RLLKHMKHENVIG 81
Query: 503 LIGYCN-----EHGQHLLVYDYGGNCTLHDLLHSDE--EAHKKFSWNIRIRVALGAARAL 555
L+ E + + + L++++ + + H +F + R L
Sbjct: 82 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGL 134
Query: 556 QYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGA 615
+Y+ I+H + K SN+ ++E +++ D GLA T++ G + A
Sbjct: 135 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTGYVATRWYRA 186
Query: 616 PEFESG--SYSCQSDVYSLGVVMLELLTGR 643
PE Y+ D++S+G +M ELLTGR
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 93/209 (44%), Gaps = 15/209 (7%)
Query: 442 FSEGNFIGEGLLGSVYKAELPGGKL-LAVKKLSNTVSQRQTDEEFLELASTISRLRHGNI 500
++ ++IGEG G V A K+ +A+KK+S Q E+ + R RH NI
Sbjct: 33 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREI-KILLRFRHENI 91
Query: 501 VELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQE 560
+ + N+ + + + DL+ +D K + + L+ L+
Sbjct: 92 IGI----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKY 147
Query: 561 VCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG----AP 616
+ ++H + K SN+LL+ +++ D GLA + + G LT + + AP
Sbjct: 148 IHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAP 204
Query: 617 E--FESGSYSCQSDVYSLGVVMLELLTGR 643
E S Y+ D++S+G ++ E+L+ R
Sbjct: 205 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 93/209 (44%), Gaps = 15/209 (7%)
Query: 442 FSEGNFIGEGLLGSVYKAELPGGKL-LAVKKLSNTVSQRQTDEEFLELASTISRLRHGNI 500
++ ++IGEG G V A K+ +A+KK+S Q E+ + R RH NI
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREI-KILLRFRHENI 83
Query: 501 VELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQE 560
+ + N+ + + + DL+ +D K + + L+ L+
Sbjct: 84 IGI----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKY 139
Query: 561 VCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG----AP 616
+ ++H + K SN+LL+ +++ D GLA + + G LT + + AP
Sbjct: 140 IHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAP 196
Query: 617 E--FESGSYSCQSDVYSLGVVMLELLTGR 643
E S Y+ D++S+G ++ E+L+ R
Sbjct: 197 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 93/209 (44%), Gaps = 15/209 (7%)
Query: 442 FSEGNFIGEGLLGSVYKAELPGGKL-LAVKKLSNTVSQRQTDEEFLELASTISRLRHGNI 500
++ ++IGEG G V A K+ +A+KK+S Q E+ + R RH NI
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREI-KILLRFRHENI 87
Query: 501 VELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQE 560
+ + N+ + + + DL+ +D K + + L+ L+
Sbjct: 88 IGI----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKY 143
Query: 561 VCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG----AP 616
+ ++H + K SN+LL+ +++ D GLA + + G LT + + AP
Sbjct: 144 IHSANVLHRDLKPSNLLLNTTXDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAP 200
Query: 617 E--FESGSYSCQSDVYSLGVVMLELLTGR 643
E S Y+ D++S+G ++ E+L+ R
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 94/211 (44%), Gaps = 35/211 (16%)
Query: 448 IGEGLLGSVYKA-ELPGGKLLAVKKLS----NTVSQRQTDEEFLELASTISRLRHGNIVE 502
+G G GSV A + G +AVKKLS + + ++T E + ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL----RLLKHMKHENVIG 85
Query: 503 LIGY------CNEHGQHLLVYDYGGNCTLHDLLHSDE--EAHKKFSWNIRIRVALGAARA 554
L+ E LV G L++++ + + H +F + R
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQF-------LIYQILRG 137
Query: 555 LQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG 614
L+Y+ I+H + K SN+ ++E +++ D GLA T++ G +
Sbjct: 138 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTGYVATRWYR 189
Query: 615 APE--FESGSYSCQSDVYSLGVVMLELLTGR 643
APE + Y+ D++S+G +M ELLTGR
Sbjct: 190 APEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 93/209 (44%), Gaps = 15/209 (7%)
Query: 442 FSEGNFIGEGLLGSVYKAELPGGKL-LAVKKLSNTVSQRQTDEEFLELASTISRLRHGNI 500
++ ++IGEG G V A K+ +A+KK+S Q E+ + R RH NI
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREI-KILLRFRHENI 87
Query: 501 VELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQE 560
+ + N+ + + + DL+ +D K + + L+ L+
Sbjct: 88 IGI----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKY 143
Query: 561 VCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG----AP 616
+ ++H + K SN+LL+ +++ D GLA + + G LT + + AP
Sbjct: 144 IHSANVLHRDLKPSNLLLNTTXDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAP 200
Query: 617 E--FESGSYSCQSDVYSLGVVMLELLTGR 643
E S Y+ D++S+G ++ E+L+ R
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 93/209 (44%), Gaps = 15/209 (7%)
Query: 442 FSEGNFIGEGLLGSVYKAELPGGKL-LAVKKLSNTVSQRQTDEEFLELASTISRLRHGNI 500
++ ++IGEG G V A K+ +A+KK+S Q E+ + R RH NI
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREI-KILLRFRHENI 88
Query: 501 VELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQE 560
+ + N+ + + + DL+ +D K + + L+ L+
Sbjct: 89 IGI----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKY 144
Query: 561 VCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG----AP 616
+ ++H + K SN+LL+ +++ D GLA + + G LT + + AP
Sbjct: 145 IHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAP 201
Query: 617 E--FESGSYSCQSDVYSLGVVMLELLTGR 643
E S Y+ D++S+G ++ E+L+ R
Sbjct: 202 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 93/209 (44%), Gaps = 15/209 (7%)
Query: 442 FSEGNFIGEGLLGSVYKAELPGGKL-LAVKKLSNTVSQRQTDEEFLELASTISRLRHGNI 500
++ ++IGEG G V A K+ +A+KK+S Q E+ + R RH NI
Sbjct: 31 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREI-KILLRFRHENI 89
Query: 501 VELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQE 560
+ + N+ + + + DL+ +D K + + L+ L+
Sbjct: 90 IGI----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKY 145
Query: 561 VCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG----AP 616
+ ++H + K SN+LL+ +++ D GLA + + G LT + + AP
Sbjct: 146 IHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAP 202
Query: 617 E--FESGSYSCQSDVYSLGVVMLELLTGR 643
E S Y+ D++S+G ++ E+L+ R
Sbjct: 203 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 93/209 (44%), Gaps = 15/209 (7%)
Query: 442 FSEGNFIGEGLLGSVYKAELPGGKL-LAVKKLSNTVSQRQTDEEFLELASTISRLRHGNI 500
++ ++IGEG G V A K+ +A+KK+S Q E+ + R RH NI
Sbjct: 22 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREI-KILLRFRHENI 80
Query: 501 VELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQE 560
+ + N+ + + + DL+ +D K + + L+ L+
Sbjct: 81 IGI----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKY 136
Query: 561 VCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG----AP 616
+ ++H + K SN+LL+ +++ D GLA + + G LT + + AP
Sbjct: 137 IHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAP 193
Query: 617 E--FESGSYSCQSDVYSLGVVMLELLTGR 643
E S Y+ D++S+G ++ E+L+ R
Sbjct: 194 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 93/209 (44%), Gaps = 15/209 (7%)
Query: 442 FSEGNFIGEGLLGSVYKAELPGGKL-LAVKKLSNTVSQRQTDEEFLELASTISRLRHGNI 500
++ ++IGEG G V A K+ +A+KK+S Q E+ + R RH NI
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREI-KILLRFRHENI 87
Query: 501 VELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQE 560
+ + N+ + + + DL+ +D K + + L+ L+
Sbjct: 88 IGI----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKY 143
Query: 561 VCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG----AP 616
+ ++H + K SN+LL+ +++ D GLA + + G LT + + AP
Sbjct: 144 IHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAP 200
Query: 617 E--FESGSYSCQSDVYSLGVVMLELLTGR 643
E S Y+ D++S+G ++ E+L+ R
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 93/209 (44%), Gaps = 15/209 (7%)
Query: 442 FSEGNFIGEGLLGSVYKAELPGGKL-LAVKKLSNTVSQRQTDEEFLELASTISRLRHGNI 500
++ ++IGEG G V A K+ +A+KK+S Q E+ + R RH NI
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREI-KILLRFRHENI 83
Query: 501 VELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQE 560
+ + N+ + + + DL+ +D K + + L+ L+
Sbjct: 84 IGI----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKY 139
Query: 561 VCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG----AP 616
+ ++H + K SN+LL+ +++ D GLA + + G LT + + AP
Sbjct: 140 IHSANVLHRDLKPSNLLLNTTXDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAP 196
Query: 617 E--FESGSYSCQSDVYSLGVVMLELLTGR 643
E S Y+ D++S+G ++ E+L+ R
Sbjct: 197 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 93/209 (44%), Gaps = 15/209 (7%)
Query: 442 FSEGNFIGEGLLGSVYKAELPGGKL-LAVKKLSNTVSQRQTDEEFLELASTISRLRHGNI 500
++ ++IGEG G V A K+ +A+KK+S Q E+ + R RH NI
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREI-KILLRFRHENI 81
Query: 501 VELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQE 560
+ + N+ + + + DL+ +D K + + L+ L+
Sbjct: 82 IGI----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKY 137
Query: 561 VCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG----AP 616
+ ++H + K SN+LL+ +++ D GLA + + G LT + + AP
Sbjct: 138 IHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAP 194
Query: 617 E--FESGSYSCQSDVYSLGVVMLELLTGR 643
E S Y+ D++S+G ++ E+L+ R
Sbjct: 195 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 93/211 (44%), Gaps = 35/211 (16%)
Query: 448 IGEGLLGSVYKA-ELPGGKLLAVKKLS----NTVSQRQTDEEFLELASTISRLRHGNIVE 502
IG G GSV A + G +AVKKLS + + ++T E + ++H N++
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL----RLLKHMKHENVIG 90
Query: 503 LIGY------CNEHGQHLLVYDYGGNCTLHDLLHSDE--EAHKKFSWNIRIRVALGAARA 554
L+ E LV G L++++ + + H +F + R
Sbjct: 91 LLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQF-------LIYQILRG 142
Query: 555 LQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG 614
L+Y+ I+H + K SN+ ++E +++ D GLA T++ G +
Sbjct: 143 LKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLA-----RHTDDEMTGYVATRWYR 194
Query: 615 APEFESG--SYSCQSDVYSLGVVMLELLTGR 643
APE Y+ D++S+G +M ELLTGR
Sbjct: 195 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 95/210 (45%), Gaps = 15/210 (7%)
Query: 448 IGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYC 507
+G+G G VYKA+ LA K+ T S+ + ++ +E+ ++ H IV+L+G
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEI-EILATCDHPYIVKLLGAY 77
Query: 508 NEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIV 567
G+ ++ ++ + ++ + + + R L AL +L I+
Sbjct: 78 YHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQML---EALNFLH---SKRII 131
Query: 568 HGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPE------FESG 621
H + K+ N+L+ + +R++D G++ + T + + + APE +
Sbjct: 132 HRDLKAGNVLMTLEGDIRLADFGVSAK--NLKTLQKRDSFIGTPYWMAPEVVMCETMKDT 189
Query: 622 SYSCQSDVYSLGVVMLELLTGRKPYDRSRP 651
Y ++D++SLG+ ++E+ P+ P
Sbjct: 190 PYDYKADIWSLGITLIEMAQIEPPHHELNP 219
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 94/210 (44%), Gaps = 33/210 (15%)
Query: 448 IGEGLLGSVYKA-ELPGGKLLAVKKLS----NTVSQRQTDEEFLELASTISRLRHGNIVE 502
+G G GSV + ++ G +AVKKLS + + ++T E + ++H N++
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYREL----RLLKHMKHENVIG 114
Query: 503 LIGYCN-----EHGQHLLVYDYGGNCTLHDLLHSDE--EAHKKFSWNIRIRVALGAARAL 555
L+ E + + + L++++ + + H +F + R L
Sbjct: 115 LLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGL 167
Query: 556 QYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGA 615
+Y+ I+H + K SN+ ++E +++ D GLA T++ G + A
Sbjct: 168 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTGYVATRWYRA 219
Query: 616 PEFESG--SYSCQSDVYSLGVVMLELLTGR 643
PE Y+ D++S+G +M ELLTGR
Sbjct: 220 PEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 35/211 (16%)
Query: 448 IGEGLLGSVYKA-ELPGGKLLAVKKLS----NTVSQRQTDEEFLELASTISRLRHGNIVE 502
+G G GSV A + G +AVKKLS + + ++T E + ++H N++
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYREL----RLLKHMKHENVIG 95
Query: 503 LIGY------CNEHGQHLLVYDYGGNCTLHDLLHSDE--EAHKKFSWNIRIRVALGAARA 554
L+ E LV G L++++ + + H +F + R
Sbjct: 96 LLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQF-------LIYQILRG 147
Query: 555 LQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG 614
L+Y+ I+H + K SN+ ++E +++ D GLA T++ G +
Sbjct: 148 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTGYVATRWYR 199
Query: 615 APEFESG--SYSCQSDVYSLGVVMLELLTGR 643
APE Y+ D++S+G +M ELLTGR
Sbjct: 200 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 90/203 (44%), Gaps = 19/203 (9%)
Query: 448 IGEGLLGSVYKA-ELPGGKLLAVKKLS----NTVSQRQTDEEFLELASTISRLRHGNIVE 502
+G G GSV A + G +AVKKLS + + ++T E + ++H N++
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYREL----RLLKHMKHENVIG 81
Query: 503 LIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVC 562
L+ + ++ + L+ +D K + V + L+ L+ +
Sbjct: 82 LLDVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLIYQILRGLKYIH 138
Query: 563 EPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFESG- 621
I+H + K SN+ ++E +++ D GLA T++ G + APE
Sbjct: 139 SADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTGYVATRWYRAPEIMLNW 193
Query: 622 -SYSCQSDVYSLGVVMLELLTGR 643
Y+ D++S+G +M ELLTGR
Sbjct: 194 MHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 35/211 (16%)
Query: 448 IGEGLLGSVYKA-ELPGGKLLAVKKLS----NTVSQRQTDEEFLELASTISRLRHGNIVE 502
+G G GSV A + G +AVKKLS + + ++T E + ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYREL----RLLKHMKHENVIG 85
Query: 503 LIGY------CNEHGQHLLVYDYGGNCTLHDLLHSDE--EAHKKFSWNIRIRVALGAARA 554
L+ E LV G L++++ + + H +F + R
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQF-------LIYQILRG 137
Query: 555 LQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG 614
L+Y+ I+H + K SN+ ++E +++ D GLA T++ G +
Sbjct: 138 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTGYVATRWYR 189
Query: 615 APEFESG--SYSCQSDVYSLGVVMLELLTGR 643
APE Y+ D++S+G +M ELLTGR
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 93/214 (43%), Gaps = 20/214 (9%)
Query: 442 FSEGNFI---GEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHG 498
F + NF+ E G ++K G ++ VK L + +F E + H
Sbjct: 9 FKQLNFLTKLNENHSGELWKGRWQGNDIV-VKVLKVRDWSTRKSRDFNEECPRLRIFSHP 67
Query: 499 NIVELIGYCNE--HGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQ 556
N++ ++G C L+ + +L+++LH E + + ++ AL AR +
Sbjct: 68 NVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLH--EGTNFVVDQSQAVKFALDMARGMA 125
Query: 557 YLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAP 616
+L + EP I S ++++DE + R+S +A + FS S G + A AP
Sbjct: 126 FLHTL-EPLIPRHALNSRSVMIDEDMTARIS---MADVKFSFQ----SPGRMYAPAWVAP 177
Query: 617 EF----ESGSYSCQSDVYSLGVVMLELLTGRKPY 646
E + +D++S V++ EL+T P+
Sbjct: 178 EALQKKPEDTNRRSADMWSFAVLLWELVTREVPF 211
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 94/213 (44%), Gaps = 23/213 (10%)
Query: 442 FSEGNFIGEGLLGSVYKAELPGGKL-LAVKKLSNTVSQRQTDEEFLELASTISRLRHGNI 500
++ ++IGEG G V A K+ +A+KK+S Q E+ + R RH NI
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREI-KILLRFRHENI 103
Query: 501 VELIGYCN----EHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQ 556
+ + E + + + + L+ LL + ++ + + R L+
Sbjct: 104 IGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFL-----YQILRGLK 158
Query: 557 YLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG-- 614
Y+ ++H + K SN+LL+ +++ D GLA + + G LT + +
Sbjct: 159 YIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARV---ADPDHDHTGFLTEYVATRW 212
Query: 615 --APE--FESGSYSCQSDVYSLGVVMLELLTGR 643
APE S Y+ D++S+G ++ E+L+ R
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 35/211 (16%)
Query: 448 IGEGLLGSVYKA-ELPGGKLLAVKKLS----NTVSQRQTDEEFLELASTISRLRHGNIVE 502
+G G GSV A + G +AVKKLS + + ++T E + ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL----RLLKHMKHENVIG 85
Query: 503 LIGY------CNEHGQHLLVYDYGGNCTLHDLLHSDE--EAHKKFSWNIRIRVALGAARA 554
L+ E LV G L++++ + + H +F + R
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQF-------LIYQILRG 137
Query: 555 LQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG 614
L+Y+ I+H + K SN+ ++E +++ D GLA T++ G +
Sbjct: 138 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDAGLA-----RHTDDEMTGYVATRWYR 189
Query: 615 APEFESG--SYSCQSDVYSLGVVMLELLTGR 643
APE Y+ D++S+G +M ELLTGR
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 93/217 (42%), Gaps = 34/217 (15%)
Query: 445 GNFIGEGLLGSVYKAE--LPGGKLLAVKKLSNTVSQRQTDEEFLELASTISR-------L 495
G+ +G G G V E L G K+ AVK L+ RQ L++ I R
Sbjct: 16 GDTLGVGTFGKVKIGEHQLTGHKV-AVKILN-----RQKIRS-LDVVGKIKREIQNLKLF 68
Query: 496 RHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARAL 555
RH +I++L + +V +Y L D + H + R+ A+
Sbjct: 69 RHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICK----HGRVEEMEARRLFQQILSAV 124
Query: 556 QYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGS-- 613
Y +VH + K N+LLD + +++D GL+ ++ G E L T+ GS
Sbjct: 125 DYCHR---HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG------EFLRTSCGSPN 175
Query: 614 -GAPEFESGSYSC--QSDVYSLGVVMLELLTGRKPYD 647
APE SG + D++S GV++ LL G P+D
Sbjct: 176 YAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 92/214 (42%), Gaps = 25/214 (11%)
Query: 448 IGEGLLGSVYKAELPGG---KLLAVKKLSNTVSQRQTD---------EEFLELASTISRL 495
+G G G V + G K + V K S R +D EE S + L
Sbjct: 44 LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL 103
Query: 496 RHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARAL 555
H NI++L + LV ++ L + + + + + + NI ++ G
Sbjct: 104 DHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGIC--- 160
Query: 556 QYLQEVCEPPIVHGNFKSSNILLDEK---LIVRVSDCGLAPLLFSGSTNELSEGLLTAHG 612
YL + IVH + K NILL+ K L +++ D GL+ F +L + L TA+
Sbjct: 161 -YLHK---HNIVHRDIKPENILLENKNSLLNIKIVDFGLSS--FFSKDYKLRDRLGTAYY 214
Query: 613 SGAPEFESGSYSCQSDVYSLGVVMLELLTGRKPY 646
APE Y+ + DV+S GV+M LL G P+
Sbjct: 215 I-APEVLKKKYNEKCDVWSCGVIMYILLCGYPPF 247
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 35/211 (16%)
Query: 448 IGEGLLGSVYKA-ELPGGKLLAVKKLS----NTVSQRQTDEEFLELASTISRLRHGNIVE 502
+G G GSV A + G +AVKKLS + + ++T E + ++H N++
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL----RLLKHMKHENVIG 81
Query: 503 LIGY------CNEHGQHLLVYDYGGNCTLHDLLHSDE--EAHKKFSWNIRIRVALGAARA 554
L+ E LV G L++++ + + H +F + R
Sbjct: 82 LLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQF-------LIYQILRG 133
Query: 555 LQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG 614
L+Y+ I+H + K SN+ ++E +++ D GLA T++ G +
Sbjct: 134 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTGYVATRWYR 185
Query: 615 APEFESG--SYSCQSDVYSLGVVMLELLTGR 643
APE Y+ D++S+G +M ELLTGR
Sbjct: 186 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 95/210 (45%), Gaps = 15/210 (7%)
Query: 448 IGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYC 507
+G+G G VYKA+ LA K+ T S+ + ++ +E+ ++ H IV+L+G
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEI-EILATCDHPYIVKLLGAY 85
Query: 508 NEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIV 567
G+ ++ ++ + ++ + + + R L AL +L I+
Sbjct: 86 YHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQML---EALNFLH---SKRII 139
Query: 568 HGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPE------FESG 621
H + K+ N+L+ + +R++D G++ + T + + + APE +
Sbjct: 140 HRDLKAGNVLMTLEGDIRLADFGVSAK--NLKTLQKRDSFIGTPYWMAPEVVMCETMKDT 197
Query: 622 SYSCQSDVYSLGVVMLELLTGRKPYDRSRP 651
Y ++D++SLG+ ++E+ P+ P
Sbjct: 198 PYDYKADIWSLGITLIEMAQIEPPHHELNP 227
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 35/211 (16%)
Query: 448 IGEGLLGSVYKA-ELPGGKLLAVKKLS----NTVSQRQTDEEFLELASTISRLRHGNIVE 502
+G G GSV A + G +AVKKLS + + ++T E + ++H N++
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYREL----RLLKHMKHENVIG 105
Query: 503 LIGY------CNEHGQHLLVYDYGGNCTLHDLLHSDE--EAHKKFSWNIRIRVALGAARA 554
L+ E LV G L++++ + + H +F + R
Sbjct: 106 LLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQF-------LIYQILRG 157
Query: 555 LQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG 614
L+Y+ I+H + K SN+ ++E +++ D GLA T++ G +
Sbjct: 158 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMXGXVATRWYR 209
Query: 615 APEFESG--SYSCQSDVYSLGVVMLELLTGR 643
APE Y+ D++S+G +M ELLTGR
Sbjct: 210 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 35/211 (16%)
Query: 448 IGEGLLGSVYKA-ELPGGKLLAVKKLS----NTVSQRQTDEEFLELASTISRLRHGNIVE 502
+G G GSV A + G +AVKKLS + + ++T E + ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL----RLLKHMKHENVIG 85
Query: 503 LIGY------CNEHGQHLLVYDYGGNCTLHDLLHSDE--EAHKKFSWNIRIRVALGAARA 554
L+ E LV G L++++ + + H +F + R
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKXQKLTDDHVQF-------LIYQILRG 137
Query: 555 LQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG 614
L+Y+ I+H + K SN+ ++E +++ D GLA T++ G +
Sbjct: 138 LKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLA-----RHTDDEMTGYVATRWYR 189
Query: 615 APEFESG--SYSCQSDVYSLGVVMLELLTGR 643
APE Y+ D++S+G +M ELLTGR
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 35/211 (16%)
Query: 448 IGEGLLGSVYKA-ELPGGKLLAVKKLS----NTVSQRQTDEEFLELASTISRLRHGNIVE 502
+G G GSV A + G +AVKKLS + + ++T E + ++H N++
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYREL----RLLKHMKHENVIG 105
Query: 503 LIGY------CNEHGQHLLVYDYGGNCTLHDLLHSDE--EAHKKFSWNIRIRVALGAARA 554
L+ E LV G L++++ + + H +F + R
Sbjct: 106 LLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQF-------LIYQILRG 157
Query: 555 LQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG 614
L+Y+ I+H + K SN+ ++E +++ D GLA T++ G +
Sbjct: 158 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTGYVATRWYR 209
Query: 615 APEFESG--SYSCQSDVYSLGVVMLELLTGR 643
APE Y+ D++S+G +M ELLTGR
Sbjct: 210 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 35/211 (16%)
Query: 448 IGEGLLGSVYKA-ELPGGKLLAVKKLS----NTVSQRQTDEEFLELASTISRLRHGNIVE 502
+G G GSV A + G +AVKKLS + + ++T E + ++H N++
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL----RLLKHMKHENVIG 82
Query: 503 LIGY------CNEHGQHLLVYDYGGNCTLHDLLHSDE--EAHKKFSWNIRIRVALGAARA 554
L+ E LV G L++++ + + H +F + R
Sbjct: 83 LLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQF-------LIYQILRG 134
Query: 555 LQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG 614
L+Y+ I+H + K SN+ ++E +++ D GLA T++ G +
Sbjct: 135 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTGYVATRWYR 186
Query: 615 APEFESG--SYSCQSDVYSLGVVMLELLTGR 643
APE Y+ D++S+G +M ELLTGR
Sbjct: 187 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 93/210 (44%), Gaps = 33/210 (15%)
Query: 448 IGEGLLGSVYKA-ELPGGKLLAVKKLS----NTVSQRQTDEEFLELASTISRLRHGNIVE 502
+G G GSV A + G +AVKKLS + + ++T E + ++H N++
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL----RLLKHMKHENVIG 82
Query: 503 LIGYCN-----EHGQHLLVYDYGGNCTLHDLLHSDE--EAHKKFSWNIRIRVALGAARAL 555
L+ E + + + L++++ + + H +F + R L
Sbjct: 83 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGL 135
Query: 556 QYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGA 615
+Y+ I+H + K SN+ ++E +++ D GLA T++ G + A
Sbjct: 136 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTGYVATRWYRA 187
Query: 616 PEFESG--SYSCQSDVYSLGVVMLELLTGR 643
PE Y+ D++S+G +M ELLTGR
Sbjct: 188 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 93/210 (44%), Gaps = 33/210 (15%)
Query: 448 IGEGLLGSVYKA-ELPGGKLLAVKKLS----NTVSQRQTDEEFLELASTISRLRHGNIVE 502
+G G GSV A + G +AVKKLS + + ++T E + ++H N++
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL----RLLKHMKHENVIG 83
Query: 503 LIGYCN-----EHGQHLLVYDYGGNCTLHDLLHSDE--EAHKKFSWNIRIRVALGAARAL 555
L+ E + + + L++++ + + H +F + R L
Sbjct: 84 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGL 136
Query: 556 QYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGA 615
+Y+ I+H + K SN+ ++E +++ D GLA T++ G + A
Sbjct: 137 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTGYVATRWYRA 188
Query: 616 PEFESG--SYSCQSDVYSLGVVMLELLTGR 643
PE Y+ D++S+G +M ELLTGR
Sbjct: 189 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 99/222 (44%), Gaps = 16/222 (7%)
Query: 433 ASLQQYTNSFSEGN---FIGEGLLGSVYKA-ELPGGKLLAVKKLSNTVSQRQTDEEFLEL 488
+ L +Y + E +G+G G VY +L +A+K++ S+ + E
Sbjct: 12 SDLLEYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYS--QPLHEE 69
Query: 489 ASTISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVA 548
+ L+H NIV+ +G +E+G + + +L LL S K I
Sbjct: 70 IALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTI----G 125
Query: 549 LGAARALQYLQEVCEPPIVHGNFKSSNILLDEKL-IVRVSDCGLAPLLFSGSTNELSEGL 607
+ L+ L+ + + IVH + K N+L++ ++++SD G + L N +E
Sbjct: 126 FYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRL--AGINPCTETF 183
Query: 608 LTAHGSGAPEF-ESG--SYSCQSDVYSLGVVMLELLTGRKPY 646
APE + G Y +D++SLG ++E+ TG+ P+
Sbjct: 184 TGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPF 225
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 35/211 (16%)
Query: 448 IGEGLLGSVYKA-ELPGGKLLAVKKLS----NTVSQRQTDEEFLELASTISRLRHGNIVE 502
+G G GSV A + G +AVKKLS + + ++T E + ++H N++
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL----RLLKHMKHENVIG 90
Query: 503 LIGY------CNEHGQHLLVYDYGGNCTLHDLLHSDE--EAHKKFSWNIRIRVALGAARA 554
L+ E LV G L++++ + + H +F + R
Sbjct: 91 LLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQF-------LIYQILRG 142
Query: 555 LQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG 614
L+Y+ I+H + K SN+ ++E +++ D GLA T++ G +
Sbjct: 143 LKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLA-----RHTDDEMTGYVATRWYR 194
Query: 615 APEFESG--SYSCQSDVYSLGVVMLELLTGR 643
APE Y+ D++S+G +M ELLTGR
Sbjct: 195 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 124/292 (42%), Gaps = 38/292 (13%)
Query: 446 NFIGEGLLGSVYKA-ELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELI 504
+GEG V A L GK AVK + ++ F E+ + + NI+ELI
Sbjct: 19 ELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRS-RVFREVETLYQCQGNKNILELI 77
Query: 505 GYCNEHGQHLLVYD--YGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVC 562
+ + + LV++ GG+ H + K F+ RV A AL +L
Sbjct: 78 EFFEDDTRFYLVFEKLQGGSILAHI------QKQKHFNEREASRVVRDVAAALDFLHT-- 129
Query: 563 EPPIVHGNFKSSNILLD--EKLI-VRVSDCGLAP--LLFSGSTNELSEGLLTAHGSG--- 614
I H + K NIL + EK+ V++ D L L + T + L T GS
Sbjct: 130 -KGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYM 188
Query: 615 APEF------ESGSYSCQSDVYSLGVVMLELLTGRKPY------DRSRPRGEQSLVRWAI 662
APE ++ Y + D++SLGVV+ +L+G P+ D RGE + R
Sbjct: 189 APEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGE--VCRVCQ 246
Query: 663 PRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQ 714
+L + + P D A+++ S D+IS+ + + R ++++Q
Sbjct: 247 NKLFESIQEGKYEFPDKDWAHIS---SEAKDLISKLLVRDAKQRLSAAQVLQ 295
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 35/211 (16%)
Query: 448 IGEGLLGSVYKA-ELPGGKLLAVKKLS----NTVSQRQTDEEFLELASTISRLRHGNIVE 502
+G G GSV A + G +AVKKLS + + ++T E + ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL----RLLKHMKHENVIG 85
Query: 503 LIGY------CNEHGQHLLVYDYGGNCTLHDLLHSDE--EAHKKFSWNIRIRVALGAARA 554
L+ E LV G L++++ + + H +F + R
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQF-------LIYQILRG 137
Query: 555 LQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG 614
L+Y+ I+H + K SN+ ++E +++ D GLA T++ G +
Sbjct: 138 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTGYVATRWYR 189
Query: 615 APEFESG--SYSCQSDVYSLGVVMLELLTGR 643
APE Y+ D++S+G +M ELLTGR
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 113/274 (41%), Gaps = 41/274 (14%)
Query: 448 IGEGLLGSVYKA-ELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISR-LRHGNIVELIG 505
IGEG G V A E G+ +AVK + QR+ E L I R +H N+VE+
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRR---ELLFNEVVIMRDYQHFNVVEMYK 109
Query: 506 --YCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCE 563
E L+ + GG T D + + + V +AL YL
Sbjct: 110 SYLVGEELWVLMEFLQGGALT-------DIVSQVRLNEEQIATVCEAVLQALAYLHA--- 159
Query: 564 PPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFESGS- 622
++H + KS +ILL V++SD G + + L+ APE S S
Sbjct: 160 QGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKR--KXLVGTPYWMAPEVISRSL 217
Query: 623 YSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVD---PSL 679
Y+ + D++SLG++++E++ G PY P + A+ R+ D P L
Sbjct: 218 YATEVDIWSLGIMVIEMVDGEPPYFSDSP----------------VQAMKRLRDSPPPKL 261
Query: 680 DGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIV 713
++ + R D + R + +P R E++
Sbjct: 262 KNSHKVSPVLR--DFLERMLVRDPQERATAQELL 293
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 35/211 (16%)
Query: 448 IGEGLLGSVYKA-ELPGGKLLAVKKLS----NTVSQRQTDEEFLELASTISRLRHGNIVE 502
+G G GSV A + G +AVKKLS + + ++T E + ++H N++
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYREL----RLLKHMKHENVIG 104
Query: 503 LIGY------CNEHGQHLLVYDYGGNCTLHDLLHSDE--EAHKKFSWNIRIRVALGAARA 554
L+ E LV G L++++ + + H +F + R
Sbjct: 105 LLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQF-------LIYQILRG 156
Query: 555 LQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG 614
L+Y+ I+H + K SN+ ++E +++ D GLA T++ G +
Sbjct: 157 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTGYVATRWYR 208
Query: 615 APEFESG--SYSCQSDVYSLGVVMLELLTGR 643
APE Y+ D++S+G +M ELLTGR
Sbjct: 209 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 35/211 (16%)
Query: 448 IGEGLLGSVYKA-ELPGGKLLAVKKLS----NTVSQRQTDEEFLELASTISRLRHGNIVE 502
+G G GSV A + G +AVKKLS + + ++T E + ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL----RLLKHMKHENVIG 85
Query: 503 LIGY------CNEHGQHLLVYDYGGNCTLHDLLHSDE--EAHKKFSWNIRIRVALGAARA 554
L+ E LV G L++++ + + H +F + R
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKXQKLTDDHVQF-------LIYQILRG 137
Query: 555 LQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG 614
L+Y+ I+H + K SN+ ++E +++ D GLA T++ G +
Sbjct: 138 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTGYVATRWYR 189
Query: 615 APEFESG--SYSCQSDVYSLGVVMLELLTGR 643
APE Y+ D++S+G +M ELLTGR
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 35/211 (16%)
Query: 448 IGEGLLGSVYKA-ELPGGKLLAVKKLS----NTVSQRQTDEEFLELASTISRLRHGNIVE 502
+G G GSV A + G +AVKKLS + + ++T E + ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL----RLLKHMKHENVIG 85
Query: 503 LIGY------CNEHGQHLLVYDYGGNCTLHDLLHSDE--EAHKKFSWNIRIRVALGAARA 554
L+ E LV G L++++ + + H +F + R
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQF-------LIYQILRG 137
Query: 555 LQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG 614
L+Y+ I+H + K SN+ ++E +++ D GLA T++ G +
Sbjct: 138 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTGYVATRWYR 189
Query: 615 APEFESG--SYSCQSDVYSLGVVMLELLTGR 643
APE Y+ D++S+G +M ELLTGR
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 35/211 (16%)
Query: 448 IGEGLLGSVYKA-ELPGGKLLAVKKLS----NTVSQRQTDEEFLELASTISRLRHGNIVE 502
+G G GSV A + G +AVKKLS + + ++T E + ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL----RLLKHMKHENVIG 85
Query: 503 LIGY------CNEHGQHLLVYDYGGNCTLHDLLHSDE--EAHKKFSWNIRIRVALGAARA 554
L+ E LV G L++++ + + H +F + R
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQF-------LIYQILRG 137
Query: 555 LQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG 614
L+Y+ I+H + K SN+ ++E +++ D GLA T++ G +
Sbjct: 138 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTGYVATRWYR 189
Query: 615 APEFESG--SYSCQSDVYSLGVVMLELLTGR 643
APE Y+ D++S+G +M ELLTGR
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 35/211 (16%)
Query: 448 IGEGLLGSVYKA-ELPGGKLLAVKKLS----NTVSQRQTDEEFLELASTISRLRHGNIVE 502
+G G GSV A + G +AVKKLS + + ++T E + ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL----RLLKHMKHENVIG 85
Query: 503 LIGY------CNEHGQHLLVYDYGGNCTLHDLLHSDE--EAHKKFSWNIRIRVALGAARA 554
L+ E LV G L++++ + + H +F + R
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQF-------LIYQILRG 137
Query: 555 LQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG 614
L+Y+ I+H + K SN+ ++E +++ D GLA T++ G +
Sbjct: 138 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTGYVATRWYR 189
Query: 615 APEFESG--SYSCQSDVYSLGVVMLELLTGR 643
APE Y+ D++S+G +M ELLTGR
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 35/211 (16%)
Query: 448 IGEGLLGSVYKA-ELPGGKLLAVKKLS----NTVSQRQTDEEFLELASTISRLRHGNIVE 502
+G G GSV A + G +AVKKLS + + ++T E + ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL----RLLKHMKHENVIG 85
Query: 503 LIGY------CNEHGQHLLVYDYGGNCTLHDLLHSDE--EAHKKFSWNIRIRVALGAARA 554
L+ E LV G L++++ + + H +F + R
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQF-------LIYQILRG 137
Query: 555 LQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG 614
L+Y+ I+H + K SN+ ++E +++ D GLA T++ G +
Sbjct: 138 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTGXVATRWYR 189
Query: 615 APEFESG--SYSCQSDVYSLGVVMLELLTGR 643
APE Y+ D++S+G +M ELLTGR
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 35/211 (16%)
Query: 448 IGEGLLGSVYKA-ELPGGKLLAVKKLS----NTVSQRQTDEEFLELASTISRLRHGNIVE 502
+G G GSV A + G +AVKKLS + + ++T E + ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL----RLLKHMKHENVIG 85
Query: 503 LIGY------CNEHGQHLLVYDYGGNCTLHDLLHSDE--EAHKKFSWNIRIRVALGAARA 554
L+ E LV G L++++ + + H +F + R
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQF-------LIYQILRG 137
Query: 555 LQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG 614
L+Y+ I+H + K SN+ ++E +++ D GLA T++ G +
Sbjct: 138 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTGYVATRWYR 189
Query: 615 APEFESG--SYSCQSDVYSLGVVMLELLTGR 643
APE Y+ D++S+G +M ELLTGR
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 35/211 (16%)
Query: 448 IGEGLLGSVYKA-ELPGGKLLAVKKLS----NTVSQRQTDEEFLELASTISRLRHGNIVE 502
+G G GSV A + G +AVKKLS + + ++T E + ++H N++
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL----RLLKHMKHENVIG 87
Query: 503 LIGY------CNEHGQHLLVYDYGGNCTLHDLLHSDE--EAHKKFSWNIRIRVALGAARA 554
L+ E LV G L++++ + + H +F + R
Sbjct: 88 LLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQF-------LIYQILRG 139
Query: 555 LQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG 614
L+Y+ I+H + K SN+ ++E +++ D GLA T++ G +
Sbjct: 140 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTGYVATRWYR 191
Query: 615 APEFESG--SYSCQSDVYSLGVVMLELLTGR 643
APE Y+ D++S+G +M ELLTGR
Sbjct: 192 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 93/204 (45%), Gaps = 13/204 (6%)
Query: 448 IGEGLLGSVYKA-ELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGY 506
+G+G G VY +L +A+K++ S+ + E + L+H NIV+ +G
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYS--QPLHEEIALHKHLKHKNIVQYLGS 73
Query: 507 CNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPI 566
+E+G + + +L LL S K I + L+ L+ + + I
Sbjct: 74 FSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTI----GFYTKQILEGLKYLHDNQI 129
Query: 567 VHGNFKSSNILLDEKL-IVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEF-ESG--S 622
VH + K N+L++ ++++SD G + L N +E APE + G
Sbjct: 130 VHRDIKGDNVLINTYSGVLKISDFGTSKRL--AGINPCTETFTGTLQYMAPEIIDKGPRG 187
Query: 623 YSCQSDVYSLGVVMLELLTGRKPY 646
Y +D++SLG ++E+ TG+ P+
Sbjct: 188 YGKAADIWSLGCTIIEMATGKPPF 211
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 35/211 (16%)
Query: 448 IGEGLLGSVYKA-ELPGGKLLAVKKLS----NTVSQRQTDEEFLELASTISRLRHGNIVE 502
+G G GSV A + G +AVKKLS + + ++T E + ++H N++
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL----RLLKHMKHENVIG 90
Query: 503 LIGY------CNEHGQHLLVYDYGGNCTLHDLLHSDE--EAHKKFSWNIRIRVALGAARA 554
L+ E LV G L++++ + + H +F + R
Sbjct: 91 LLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQF-------LIYQILRG 142
Query: 555 LQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG 614
L+Y+ I+H + K SN+ ++E +++ D GLA T++ G +
Sbjct: 143 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTGYVATRWYR 194
Query: 615 APEFESG--SYSCQSDVYSLGVVMLELLTGR 643
APE Y+ D++S+G +M ELLTGR
Sbjct: 195 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 35/211 (16%)
Query: 448 IGEGLLGSVYKA-ELPGGKLLAVKKLS----NTVSQRQTDEEFLELASTISRLRHGNIVE 502
+G G GSV A + G +AVKKLS + + ++T E + ++H N++
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL----RLLKHMKHENVIG 92
Query: 503 LIGY------CNEHGQHLLVYDYGGNCTLHDLLHSDE--EAHKKFSWNIRIRVALGAARA 554
L+ E LV G L++++ + + H +F + R
Sbjct: 93 LLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQF-------LIYQILRG 144
Query: 555 LQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG 614
L+Y+ I+H + K SN+ ++E +++ D GLA T++ G +
Sbjct: 145 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTGYVATRWYR 196
Query: 615 APEFESG--SYSCQSDVYSLGVVMLELLTGR 643
APE Y+ D++S+G +M ELLTGR
Sbjct: 197 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 35/211 (16%)
Query: 448 IGEGLLGSVYKA-ELPGGKLLAVKKLS----NTVSQRQTDEEFLELASTISRLRHGNIVE 502
+G G GSV A + G +AVKKLS + + ++T E + ++H N++
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL----RLLKHMKHENVIG 96
Query: 503 LIGY------CNEHGQHLLVYDYGGNCTLHDLLHSDE--EAHKKFSWNIRIRVALGAARA 554
L+ E LV G L++++ + + H +F + R
Sbjct: 97 LLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQF-------LIYQILRG 148
Query: 555 LQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG 614
L+Y+ I+H + K SN+ ++E +++ D GLA T++ G +
Sbjct: 149 LKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLA-----RHTDDEMTGYVATRWYR 200
Query: 615 APEFESG--SYSCQSDVYSLGVVMLELLTGR 643
APE Y+ D++S+G +M ELLTGR
Sbjct: 201 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 35/211 (16%)
Query: 448 IGEGLLGSVYKA-ELPGGKLLAVKKLS----NTVSQRQTDEEFLELASTISRLRHGNIVE 502
+G G GSV A + G +AVKKLS + + ++T E + ++H N++
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYREL----RLLKHMKHENVIG 91
Query: 503 LIGY------CNEHGQHLLVYDYGGNCTLHDLLHSDE--EAHKKFSWNIRIRVALGAARA 554
L+ E LV G L++++ + + H +F + R
Sbjct: 92 LLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQF-------LIYQILRG 143
Query: 555 LQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG 614
L+Y+ I+H + K SN+ ++E +++ D GLA T++ G +
Sbjct: 144 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTGYVATRWYR 195
Query: 615 APEFESG--SYSCQSDVYSLGVVMLELLTGR 643
APE Y+ D++S+G +M ELLTGR
Sbjct: 196 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 35/211 (16%)
Query: 448 IGEGLLGSVYKA-ELPGGKLLAVKKLS----NTVSQRQTDEEFLELASTISRLRHGNIVE 502
+G G GSV A + G +AVKKLS + + ++T E + ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL----RLLKHMKHENVIG 85
Query: 503 LIGY------CNEHGQHLLVYDYGGNCTLHDLLHSDE--EAHKKFSWNIRIRVALGAARA 554
L+ E LV G L++++ + + H +F + R
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQF-------LIYQILRG 137
Query: 555 LQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG 614
L+Y+ I+H + K SN+ ++E +++ D GLA T++ G +
Sbjct: 138 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTGYVATRWYR 189
Query: 615 APEFESG--SYSCQSDVYSLGVVMLELLTGR 643
APE Y+ D++S+G +M ELLTGR
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 35/211 (16%)
Query: 448 IGEGLLGSVYKA-ELPGGKLLAVKKLS----NTVSQRQTDEEFLELASTISRLRHGNIVE 502
+G G GSV A + G +AVKKLS + + ++T E + ++H N++
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL----RLLKHMKHENVIG 108
Query: 503 LIGY------CNEHGQHLLVYDYGGNCTLHDLLHSDE--EAHKKFSWNIRIRVALGAARA 554
L+ E LV G L++++ + + H +F + R
Sbjct: 109 LLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQF-------LIYQILRG 160
Query: 555 LQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG 614
L+Y+ I+H + K SN+ ++E +++ D GLA T++ G +
Sbjct: 161 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMXGYVATRWYR 212
Query: 615 APEFESG--SYSCQSDVYSLGVVMLELLTGR 643
APE Y+ D++S+G +M ELLTGR
Sbjct: 213 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 35/211 (16%)
Query: 448 IGEGLLGSVYKA-ELPGGKLLAVKKLS----NTVSQRQTDEEFLELASTISRLRHGNIVE 502
+G G GSV A + G +AVKKLS + + ++T E + ++H N++
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL----RLLKHMKHENVIG 90
Query: 503 LIGY------CNEHGQHLLVYDYGGNCTLHDLLHSDE--EAHKKFSWNIRIRVALGAARA 554
L+ E LV G L++++ + + H +F + R
Sbjct: 91 LLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQF-------LIYQILRG 142
Query: 555 LQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG 614
L+Y+ I+H + K SN+ ++E +++ D GLA T++ G +
Sbjct: 143 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTGYVATRWYR 194
Query: 615 APEFESG--SYSCQSDVYSLGVVMLELLTGR 643
APE Y+ D++S+G +M ELLTGR
Sbjct: 195 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 93/209 (44%), Gaps = 15/209 (7%)
Query: 442 FSEGNFIGEGLLGSVYKAELPGGKL-LAVKKLSNTVSQRQTDEEFLELASTISRLRHGNI 500
++ ++IGEG G V A K+ +A++K+S Q E+ + R RH NI
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREI-KILLRFRHENI 87
Query: 501 VELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQE 560
+ + N+ + + + DL+ +D K + + L+ L+
Sbjct: 88 IGI----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKY 143
Query: 561 VCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG----AP 616
+ ++H + K SN+LL+ +++ D GLA + + G LT + + AP
Sbjct: 144 IHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAP 200
Query: 617 E--FESGSYSCQSDVYSLGVVMLELLTGR 643
E S Y+ D++S+G ++ E+L+ R
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 35/211 (16%)
Query: 448 IGEGLLGSVYKA-ELPGGKLLAVKKLS----NTVSQRQTDEEFLELASTISRLRHGNIVE 502
+G G GSV A + G +AVKKLS + + ++T E + ++H N++
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL----RLLKHMKHENVIG 84
Query: 503 LIGY------CNEHGQHLLVYDYGGNCTLHDLLHSDE--EAHKKFSWNIRIRVALGAARA 554
L+ E LV G L++++ + + H +F + R
Sbjct: 85 LLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQF-------LIYQILRG 136
Query: 555 LQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG 614
L+Y+ I+H + K SN+ ++E +++ D GLA T++ G +
Sbjct: 137 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTGYVATRWYR 188
Query: 615 APEFESG--SYSCQSDVYSLGVVMLELLTGR 643
APE Y+ D++S+G +M ELLTGR
Sbjct: 189 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 93/210 (44%), Gaps = 33/210 (15%)
Query: 448 IGEGLLGSVYKA-ELPGGKLLAVKKLS----NTVSQRQTDEEFLELASTISRLRHGNIVE 502
+G G GSV A + G +AVKKLS + + ++T E + ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL----RLLKHMKHENVIG 85
Query: 503 LIGYCN-----EHGQHLLVYDYGGNCTLHDLLHSDE--EAHKKFSWNIRIRVALGAARAL 555
L+ E + + + L++++ + + H +F + R L
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGL 138
Query: 556 QYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGA 615
+Y+ I+H + K SN+ ++E +++ D GLA T++ G + A
Sbjct: 139 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTGYVATRWYRA 190
Query: 616 PEFESG--SYSCQSDVYSLGVVMLELLTGR 643
PE Y+ D++S+G +M ELLTGR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 35/211 (16%)
Query: 448 IGEGLLGSVYKA-ELPGGKLLAVKKLS----NTVSQRQTDEEFLELASTISRLRHGNIVE 502
+G G GSV A + G +AVKKLS + + ++T E + ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL----RLLKHMKHENVIG 85
Query: 503 LIGY------CNEHGQHLLVYDYGGNCTLHDLLHSDE--EAHKKFSWNIRIRVALGAARA 554
L+ E LV G L++++ + + H +F + R
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQF-------LIYQILRG 137
Query: 555 LQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG 614
L+Y+ I+H + K SN+ ++E +++ D GLA T++ G +
Sbjct: 138 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDYGLA-----RHTDDEMTGYVATRWYR 189
Query: 615 APEFESG--SYSCQSDVYSLGVVMLELLTGR 643
APE Y+ D++S+G +M ELLTGR
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 35/211 (16%)
Query: 448 IGEGLLGSVYKA-ELPGGKLLAVKKLS----NTVSQRQTDEEFLELASTISRLRHGNIVE 502
+G G GSV A + G +AVKKLS + + ++T E + ++H N++
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL----RLLKHMKHENVIG 87
Query: 503 LIGY------CNEHGQHLLVYDYGGNCTLHDLLHSDE--EAHKKFSWNIRIRVALGAARA 554
L+ E LV G L++++ + + H +F + R
Sbjct: 88 LLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQF-------LIYQILRG 139
Query: 555 LQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG 614
L+Y+ I+H + K SN+ ++E +++ D GLA T++ G +
Sbjct: 140 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTGYVATRWYR 191
Query: 615 APEFESG--SYSCQSDVYSLGVVMLELLTGR 643
APE Y+ D++S+G +M ELLTGR
Sbjct: 192 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 35/211 (16%)
Query: 448 IGEGLLGSVYKA-ELPGGKLLAVKKLS----NTVSQRQTDEEFLELASTISRLRHGNIVE 502
+G G GSV A + G +AVKKLS + + ++T E + ++H N++
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL----RLLKHMKHENVIG 96
Query: 503 LIGY------CNEHGQHLLVYDYGGNCTLHDLLHSDE--EAHKKFSWNIRIRVALGAARA 554
L+ E LV G L++++ + + H +F + R
Sbjct: 97 LLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQF-------LIYQILRG 148
Query: 555 LQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG 614
L+Y+ I+H + K SN+ ++E +++ D GLA T++ G +
Sbjct: 149 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTGYVATRWYR 200
Query: 615 APEFESG--SYSCQSDVYSLGVVMLELLTGR 643
APE Y+ D++S+G +M ELLTGR
Sbjct: 201 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 35/211 (16%)
Query: 448 IGEGLLGSVYKA-ELPGGKLLAVKKLS----NTVSQRQTDEEFLELASTISRLRHGNIVE 502
+G G GSV A + G +AVKKLS + + ++T E + ++H N++
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL----RLLKHMKHENVIG 97
Query: 503 LIGY------CNEHGQHLLVYDYGGNCTLHDLLHSDE--EAHKKFSWNIRIRVALGAARA 554
L+ E LV G L++++ + + H +F + R
Sbjct: 98 LLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQF-------LIYQILRG 149
Query: 555 LQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG 614
L+Y+ I+H + K SN+ ++E +++ D GLA T++ G +
Sbjct: 150 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTGYVATRWYR 201
Query: 615 APEFESG--SYSCQSDVYSLGVVMLELLTGR 643
APE Y+ D++S+G +M ELLTGR
Sbjct: 202 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 35/211 (16%)
Query: 448 IGEGLLGSVYKA-ELPGGKLLAVKKLS----NTVSQRQTDEEFLELASTISRLRHGNIVE 502
+G G GSV A + G +AVKKLS + + ++T E + ++H N++
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL----RLLKHMKHENVIG 97
Query: 503 LIGY------CNEHGQHLLVYDYGGNCTLHDLLHSDE--EAHKKFSWNIRIRVALGAARA 554
L+ E LV G L++++ + + H +F + R
Sbjct: 98 LLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQF-------LIYQILRG 149
Query: 555 LQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG 614
L+Y+ I+H + K SN+ ++E +++ D GLA T++ G +
Sbjct: 150 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTGYVATRWYR 201
Query: 615 APEFESG--SYSCQSDVYSLGVVMLELLTGR 643
APE Y+ D++S+G +M ELLTGR
Sbjct: 202 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 35/211 (16%)
Query: 448 IGEGLLGSVYKA-ELPGGKLLAVKKLS----NTVSQRQTDEEFLELASTISRLRHGNIVE 502
+G G GSV A + G +AVKKLS + + ++T E + ++H N++
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL----RLLKHMKHENVIG 91
Query: 503 LIGY------CNEHGQHLLVYDYGGNCTLHDLLHSDE--EAHKKFSWNIRIRVALGAARA 554
L+ E LV G L++++ + + H +F + R
Sbjct: 92 LLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQF-------LIYQILRG 143
Query: 555 LQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG 614
L+Y+ I+H + K SN+ ++E +++ D GLA T++ G +
Sbjct: 144 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTGYVATRWYR 195
Query: 615 APEFESG--SYSCQSDVYSLGVVMLELLTGR 643
APE Y+ D++S+G +M ELLTGR
Sbjct: 196 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 35/211 (16%)
Query: 448 IGEGLLGSVYKA-ELPGGKLLAVKKLS----NTVSQRQTDEEFLELASTISRLRHGNIVE 502
+G G GSV A + G +AVKKLS + + ++T E + ++H N++
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL----RLLKHMKHENVIG 105
Query: 503 LIGY------CNEHGQHLLVYDYGGNCTLHDLLHSDE--EAHKKFSWNIRIRVALGAARA 554
L+ E LV G L++++ + + H +F + R
Sbjct: 106 LLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQF-------LIYQILRG 157
Query: 555 LQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG 614
L+Y+ I+H + K SN+ ++E +++ D GLA T++ G +
Sbjct: 158 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTGYVATRWYR 209
Query: 615 APEFESG--SYSCQSDVYSLGVVMLELLTGR 643
APE Y+ D++S+G +M ELLTGR
Sbjct: 210 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 35/211 (16%)
Query: 448 IGEGLLGSVYKA-ELPGGKLLAVKKLS----NTVSQRQTDEEFLELASTISRLRHGNIVE 502
+G G GSV A + G +AVKKLS + + ++T E + ++H N++
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYREL----RLLKHMKHENVIG 97
Query: 503 LIGY------CNEHGQHLLVYDYGGNCTLHDLLHSDE--EAHKKFSWNIRIRVALGAARA 554
L+ E LV G L++++ + + H +F + R
Sbjct: 98 LLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQF-------LIYQILRG 149
Query: 555 LQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG 614
L+Y+ I+H + K SN+ ++E +++ D GLA T++ G +
Sbjct: 150 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTGYVATRWYR 201
Query: 615 APEFESG--SYSCQSDVYSLGVVMLELLTGR 643
APE Y+ D++S+G +M ELLTGR
Sbjct: 202 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 35/211 (16%)
Query: 448 IGEGLLGSVYKA-ELPGGKLLAVKKLS----NTVSQRQTDEEFLELASTISRLRHGNIVE 502
+G G GSV A + G +AVKKLS + + ++T E + ++H N++
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL----RLLKHMKHENVIG 104
Query: 503 LIGY------CNEHGQHLLVYDYGGNCTLHDLLHSDE--EAHKKFSWNIRIRVALGAARA 554
L+ E LV G L++++ + + H +F + R
Sbjct: 105 LLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQF-------LIYQILRG 156
Query: 555 LQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG 614
L+Y+ I+H + K SN+ ++E +++ D GLA T++ G +
Sbjct: 157 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTGYVATRWYR 208
Query: 615 APEFESG--SYSCQSDVYSLGVVMLELLTGR 643
APE Y+ D++S+G +M ELLTGR
Sbjct: 209 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 93/210 (44%), Gaps = 33/210 (15%)
Query: 448 IGEGLLGSVYKA-ELPGGKLLAVKKLS----NTVSQRQTDEEFLELASTISRLRHGNIVE 502
+G G GSV A + G +AVKKLS + + ++T E + ++H N++
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL----RLLKHMKHENVIG 87
Query: 503 LIGYCN-----EHGQHLLVYDYGGNCTLHDLLHSDE--EAHKKFSWNIRIRVALGAARAL 555
L+ E + + + L++++ + + H +F + R L
Sbjct: 88 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGL 140
Query: 556 QYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGA 615
+Y+ I+H + K SN+ ++E +++ D GLA T++ G + A
Sbjct: 141 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTGYVATRWYRA 192
Query: 616 PEFESG--SYSCQSDVYSLGVVMLELLTGR 643
PE Y+ D++S+G +M ELLTGR
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 35/211 (16%)
Query: 448 IGEGLLGSVYKA-ELPGGKLLAVKKLS----NTVSQRQTDEEFLELASTISRLRHGNIVE 502
+G G GSV A + G +AVKKLS + + ++T E + ++H N++
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL----RLLKHMKHENVIG 108
Query: 503 LIGY------CNEHGQHLLVYDYGGNCTLHDLLHSDE--EAHKKFSWNIRIRVALGAARA 554
L+ E LV G L++++ + + H +F + R
Sbjct: 109 LLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQF-------LIYQILRG 160
Query: 555 LQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG 614
L+Y+ I+H + K SN+ ++E +++ D GLA T++ G +
Sbjct: 161 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTGYVATRWYR 212
Query: 615 APEFESG--SYSCQSDVYSLGVVMLELLTGR 643
APE Y+ D++S+G +M ELLTGR
Sbjct: 213 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 35/211 (16%)
Query: 448 IGEGLLGSVYKA-ELPGGKLLAVKKLS----NTVSQRQTDEEFLELASTISRLRHGNIVE 502
+G G GSV A + G +AVKKLS + + ++T E + ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL----RLLKHMKHENVIG 85
Query: 503 LIGY------CNEHGQHLLVYDYGGNCTLHDLLHSDE--EAHKKFSWNIRIRVALGAARA 554
L+ E LV G L++++ + + H +F + R
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQF-------LIYQILRG 137
Query: 555 LQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG 614
L+Y+ I+H + K SN+ ++E +++ D GLA T++ G +
Sbjct: 138 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDRGLA-----RHTDDEMTGYVATRWYR 189
Query: 615 APEFESG--SYSCQSDVYSLGVVMLELLTGR 643
APE Y+ D++S+G +M ELLTGR
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 95/211 (45%), Gaps = 35/211 (16%)
Query: 448 IGEGLLGSVYKA-ELPGGKLLAVKKLS----NTVSQRQTDEEFLELASTISRLRHGNIVE 502
+G G GSV A + G +AVKKLS + + ++T E + ++H N++
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL----RLLKHMKHENVIG 92
Query: 503 LIGY------CNEHGQHLLVYDYGGNCTLHDLLHSDE--EAHKKFSWNIRIRVALGAARA 554
L+ E LV G L++++ + + H +F + R
Sbjct: 93 LLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQF-------LIYQILRG 144
Query: 555 LQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG 614
L+Y+ I+H + K SN+ ++E +++ D GLA + +E++ G +
Sbjct: 145 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA----RHTADEMT-GYVATRWYR 196
Query: 615 APEFESG--SYSCQSDVYSLGVVMLELLTGR 643
APE Y+ D++S+G +M ELLTGR
Sbjct: 197 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 90/211 (42%), Gaps = 29/211 (13%)
Query: 448 IGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGY- 506
IG+G G V+ + G K+ AVK T E E+ T+ +RH NI+ I
Sbjct: 45 IGKGRYGEVWMGKWRGEKV-AVKVFFTTEEASWFRET--EIYQTV-LMRHENILGFIAAD 100
Query: 507 ---CNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVC- 562
Q L+ DY N +L+D L S K +++A + L +L
Sbjct: 101 IKGTGSWTQLYLITDYHENGSLYDYLKSTTLDAKSM-----LKLAYSSVSGLCHLHTEIF 155
Query: 563 ----EPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGA--- 615
+P I H + KS NIL+ + ++D GLA + F TNE+ T G+
Sbjct: 156 STQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VKFISDTNEVDIPPNTRVGTKRYMP 214
Query: 616 PEFESGSYS-------CQSDVYSLGVVMLEL 639
PE S + +D+YS G+++ E+
Sbjct: 215 PEVLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 93/209 (44%), Gaps = 15/209 (7%)
Query: 442 FSEGNFIGEGLLGSVYKAELPGGKL-LAVKKLSNTVSQRQTDEEFLELASTISRLRHGNI 500
++ ++IGEG G V A K+ +A+KK+S Q E+ ++ RH NI
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLA-FRHENI 85
Query: 501 VELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQE 560
+ + N+ + + + DL+ +D K + + L+ L+
Sbjct: 86 IGI----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKY 141
Query: 561 VCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG----AP 616
+ ++H + K SN+LL+ +++ D GLA + + G LT + + AP
Sbjct: 142 IHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAP 198
Query: 617 E--FESGSYSCQSDVYSLGVVMLELLTGR 643
E S Y+ D++S+G ++ E+L+ R
Sbjct: 199 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 95/211 (45%), Gaps = 35/211 (16%)
Query: 448 IGEGLLGSVYKA-ELPGGKLLAVKKLS----NTVSQRQTDEEFLELASTISRLRHGNIVE 502
+G G GSV A + G +AVKKLS + + ++T E + ++H N++
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL----RLLKHMKHENVIG 92
Query: 503 LIGY------CNEHGQHLLVYDYGGNCTLHDLLHSDE--EAHKKFSWNIRIRVALGAARA 554
L+ E LV G L++++ + + H +F + R
Sbjct: 93 LLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQF-------LIYQILRG 144
Query: 555 LQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG 614
L+Y+ I+H + K SN+ ++E +++ D GLA + +E++ G +
Sbjct: 145 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA----RHTADEMT-GYVATRWYR 196
Query: 615 APEFESG--SYSCQSDVYSLGVVMLELLTGR 643
APE Y+ D++S+G +M ELLTGR
Sbjct: 197 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 35/211 (16%)
Query: 448 IGEGLLGSVYKA-ELPGGKLLAVKKLS----NTVSQRQTDEEFLELASTISRLRHGNIVE 502
+G G GSV A + G +AVKKLS + + ++T E + ++H N++
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL----RLLKHMKHENVIG 91
Query: 503 LIGY------CNEHGQHLLVYDYGGNCTLHDLLHSDE--EAHKKFSWNIRIRVALGAARA 554
L+ E LV G L++++ + + H +F + R
Sbjct: 92 LLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQF-------LIYQILRG 143
Query: 555 LQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG 614
L+Y+ I+H + K SN+ ++E +++ D GLA T++ G +
Sbjct: 144 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTGYVATRWYR 195
Query: 615 APEFESG--SYSCQSDVYSLGVVMLELLTGR 643
APE Y+ D++S+G +M ELLTGR
Sbjct: 196 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 35/211 (16%)
Query: 448 IGEGLLGSVYKA-ELPGGKLLAVKKLS----NTVSQRQTDEEFLELASTISRLRHGNIVE 502
+G G GSV A + G +AVKKLS + + ++T E + ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL----RLLKHMKHENVIG 85
Query: 503 LIGY------CNEHGQHLLVYDYGGNCTLHDLLHSDE--EAHKKFSWNIRIRVALGAARA 554
L+ E LV G L++++ + + H +F + R
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQF-------LIYQILRG 137
Query: 555 LQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG 614
L+Y+ I+H + K SN+ ++E +++ D GLA T++ G +
Sbjct: 138 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDGGLA-----RHTDDEMTGYVATRWYR 189
Query: 615 APEFESG--SYSCQSDVYSLGVVMLELLTGR 643
APE Y+ D++S+G +M ELLTGR
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 95/211 (45%), Gaps = 35/211 (16%)
Query: 448 IGEGLLGSVYKA-ELPGGKLLAVKKLS----NTVSQRQTDEEFLELASTISRLRHGNIVE 502
+G G GSV A + G +AVKKLS + + ++T E + ++H N++
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL----RLLKHMKHENVIG 92
Query: 503 LIGY------CNEHGQHLLVYDYGGNCTLHDLLHSDE--EAHKKFSWNIRIRVALGAARA 554
L+ E LV G L++++ + + H +F + R
Sbjct: 93 LLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQF-------LIYQILRG 144
Query: 555 LQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG 614
L+Y+ I+H + K SN+ ++E +++ D GLA + +E++ G +
Sbjct: 145 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA----RHTADEMT-GYVATRWYR 196
Query: 615 APEFESG--SYSCQSDVYSLGVVMLELLTGR 643
APE Y+ D++S+G +M ELLTGR
Sbjct: 197 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 96/211 (45%), Gaps = 29/211 (13%)
Query: 448 IGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIG-- 505
+G+G G V++ G + AVK S+ + E EL +T+ LRH NI+ I
Sbjct: 16 VGKGRYGEVWRGSWQGENV-AVKIFSSRDEKSWFRET--ELYNTVM-LRHENILGFIASD 71
Query: 506 YCNEHG--QHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQ-EVC 562
+ H Q L+ Y +L+D L +R+ L A L +L E+
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSC-----LRIVLSIASGLAHLHIEIF 126
Query: 563 ----EPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG---A 615
+P I H + KS NIL+ + ++D GLA ++ S STN+L G G+ A
Sbjct: 127 GTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA-VMHSQSTNQLDVGNNPRVGTKRYMA 185
Query: 616 PEF--ESGSYSC-----QSDVYSLGVVMLEL 639
PE E+ C + D+++ G+V+ E+
Sbjct: 186 PEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 35/211 (16%)
Query: 448 IGEGLLGSVYKA-ELPGGKLLAVKKLS----NTVSQRQTDEEFLELASTISRLRHGNIVE 502
+G G GSV A + G +AVKKLS + + ++T E + ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL----RLLKHMKHENVIG 85
Query: 503 LIGY------CNEHGQHLLVYDYGGNCTLHDLLHSDE--EAHKKFSWNIRIRVALGAARA 554
L+ E LV G L++++ S + + H +F + R
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKSQKLTDDHVQF-------LIYQILRG 137
Query: 555 LQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG 614
L+Y+ I+H + K SN+ ++E +++ D GL T++ G +
Sbjct: 138 LKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLC-----RHTDDEMTGYVATRWYR 189
Query: 615 APEFESG--SYSCQSDVYSLGVVMLELLTGR 643
APE Y+ D++S+G +M ELLTGR
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 35/211 (16%)
Query: 448 IGEGLLGSVYKA-ELPGGKLLAVKKLS----NTVSQRQTDEEFLELASTISRLRHGNIVE 502
+G G GSV A + G +AVKKLS + + ++T E + ++H N++
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL----RLLKHMKHENVIG 87
Query: 503 LIGY------CNEHGQHLLVYDYGGNCTLHDLLHSDE--EAHKKFSWNIRIRVALGAARA 554
L+ E LV G L++++ + + H +F + R
Sbjct: 88 LLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQF-------LIYQILRG 139
Query: 555 LQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG 614
L+Y+ I+H + K SN+ ++E +++ D GLA T++ G +
Sbjct: 140 LKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLA-----RHTDDEMTGYVATRWYR 191
Query: 615 APEFESG--SYSCQSDVYSLGVVMLELLTGR 643
APE Y+ D++S+G +M ELLTGR
Sbjct: 192 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 101/234 (43%), Gaps = 42/234 (17%)
Query: 432 IASLQQYTNSF---SEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLEL 488
+ + Q NSF S+ +G G G V+K E L K+ T + +E E+
Sbjct: 78 VTAKQGAVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEI 137
Query: 489 ASTISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVA 548
S +++L H N+++L +LV +Y L D + + S+N
Sbjct: 138 -SVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDE-------SYN------ 183
Query: 549 LGAARALQYLQEVCE-------PPIVHGNFKSSNILL---DEKLIVRVSDCGLAPLLFSG 598
L + +++++CE I+H + K NIL D K I ++ D GLA
Sbjct: 184 LTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQI-KIIDFGLA------ 236
Query: 599 STNELSEGLLTAHGSGAPEF---ESGSY---SCQSDVYSLGVVMLELLTGRKPY 646
+ E L G+ PEF E +Y S +D++S+GV+ LL+G P+
Sbjct: 237 RRYKPREKLKVNFGT--PEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPF 288
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 35/211 (16%)
Query: 448 IGEGLLGSVYKA-ELPGGKLLAVKKLS----NTVSQRQTDEEFLELASTISRLRHGNIVE 502
+G G GSV A + G +AVKKLS + + ++T E + ++H N++
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL----RLLKHMKHENVIG 91
Query: 503 LIGY------CNEHGQHLLVYDYGGNCTLHDLLHSDE--EAHKKFSWNIRIRVALGAARA 554
L+ E LV G L++++ + + H +F + R
Sbjct: 92 LLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQF-------LIYQILRG 143
Query: 555 LQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG 614
L+Y+ I+H + K SN+ ++E +++ D GLA T++ G +
Sbjct: 144 LKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLA-----RHTDDEMTGYVATRWYR 195
Query: 615 APEFESG--SYSCQSDVYSLGVVMLELLTGR 643
APE Y+ D++S+G +M ELLTGR
Sbjct: 196 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 96/211 (45%), Gaps = 29/211 (13%)
Query: 448 IGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIG-- 505
+G+G G V++ G + AVK S+ + E EL +T+ LRH NI+ I
Sbjct: 16 VGKGRYGEVWRGSWQGENV-AVKIFSSRDEKSWFRET--ELYNTVM-LRHENILGFIASD 71
Query: 506 YCNEHG--QHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQ-EVC 562
+ H Q L+ Y +L+D L +R+ L A L +L E+
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSC-----LRIVLSIASGLAHLHIEIF 126
Query: 563 ----EPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG---A 615
+P I H + KS NIL+ + ++D GLA ++ S STN+L G G+ A
Sbjct: 127 GTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA-VMHSQSTNQLDVGNNPRVGTKRYMA 185
Query: 616 PEF--ESGSYSC-----QSDVYSLGVVMLEL 639
PE E+ C + D+++ G+V+ E+
Sbjct: 186 PEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 79/204 (38%), Gaps = 13/204 (6%)
Query: 448 IGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYC 507
+G G G V+ E L V K N + E+ + L H NI+++
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVF 89
Query: 508 NEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIV 567
++ +V + L + + S + K S + AL Y +V
Sbjct: 90 EDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHS---QHVV 146
Query: 568 HGNFKSSNILLDE---KLIVRVSDCGLAPLLFSG--STNELSEGLLTAHGSGAPEFESGS 622
H + K NIL + +++ D GLA L S STN L A PE
Sbjct: 147 HKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMA-----PEVFKRD 201
Query: 623 YSCQSDVYSLGVVMLELLTGRKPY 646
+ + D++S GVVM LLTG P+
Sbjct: 202 VTFKCDIWSAGVVMYFLLTGCLPF 225
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 85/213 (39%), Gaps = 31/213 (14%)
Query: 448 IGEGLLGSVYKAELPGGKLLAV-------KKLSNTVSQRQTDEEFLELASTISRLRHGNI 500
IG G +VYK L + V +KL+ + QR F E A + L+H NI
Sbjct: 34 IGRGSFKTVYKG-LDTETTVEVAWCELQDRKLTKSERQR-----FKEEAEXLKGLQHPNI 87
Query: 501 VELIGYCNE--HGQH--LLVYDYGGNCTLHDLLHSDEEAHKKF--SWNIRIRVALGAARA 554
V G+ +LV + + TL L + K SW +I +
Sbjct: 88 VRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQI------LKG 141
Query: 555 LQYLQEVCEPPIVHGNFKSSNILLDEKL-IVRVSDCGLAPLLFSGSTNELSEGLLTAHGS 613
LQ+L PPI+H + K NI + V++ D GLA L + ++ ++
Sbjct: 142 LQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS----FAKAVIGTPEF 196
Query: 614 GAPEFESGSYSCQSDVYSLGVVMLELLTGRKPY 646
APE Y DVY+ G LE T PY
Sbjct: 197 XAPEXYEEKYDESVDVYAFGXCXLEXATSEYPY 229
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 96/211 (45%), Gaps = 29/211 (13%)
Query: 448 IGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIG-- 505
+G+G G V++ G + AVK S+ + E EL +T+ LRH NI+ I
Sbjct: 45 VGKGRYGEVWRGSWQGENV-AVKIFSSRDEKSWFRET--ELYNTV-MLRHENILGFIASD 100
Query: 506 YCNEHG--QHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQ-EVC 562
+ H Q L+ Y +L+D L +R+ L A L +L E+
Sbjct: 101 MTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSC-----LRIVLSIASGLAHLHIEIF 155
Query: 563 ----EPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG---A 615
+P I H + KS NIL+ + ++D GLA ++ S STN+L G G+ A
Sbjct: 156 GTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA-VMHSQSTNQLDVGNNPRVGTKRYMA 214
Query: 616 PEF--ESGSYSC-----QSDVYSLGVVMLEL 639
PE E+ C + D+++ G+V+ E+
Sbjct: 215 PEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 78/164 (47%), Gaps = 17/164 (10%)
Query: 492 ISRLRHGNIVELIG--YCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVAL 549
+ RLRH N+++L+ Y E + +V +Y C + ++L S E K+F
Sbjct: 60 LRRLRHKNVIQLVDVLYNEEKQKMYMVMEYC-VCGMQEMLDSVPE--KRFPVCQAHGYFC 116
Query: 550 GAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLT 609
L+YL IVH + K N+LL +++S G+A L + ++ T
Sbjct: 117 QLIDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCR---T 170
Query: 610 AHGSGA---PEFESG--SYS-CQSDVYSLGVVMLELLTGRKPYD 647
+ GS A PE +G ++S + D++S GV + + TG P++
Sbjct: 171 SQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFE 214
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 87/208 (41%), Gaps = 22/208 (10%)
Query: 448 IGEGLLGSVYKAE-LPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGY 506
IG+G G V+KA G+ +A+KK+ + L + L+H N+V LI
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 507 CNEH--------GQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYL 558
C G LV+D+ C HDL KF+ + RV L Y+
Sbjct: 86 CRTKASPYNRCKGSIYLVFDF---CE-HDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYI 141
Query: 559 QEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLA---PLLFSGSTNELSEGLLTAHGSGA 615
I+H + K++N+L+ +++++D GLA L + N ++T
Sbjct: 142 HR---NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTL-WYRP 197
Query: 616 PEFESGS--YSCQSDVYSLGVVMLELLT 641
PE G Y D++ G +M E+ T
Sbjct: 198 PELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 92/207 (44%), Gaps = 11/207 (5%)
Query: 442 FSEGNFIGEGLLGSVYKAELPGGKL-LAVKKLSNTVSQRQTDEEFLELASTISRLRHGNI 500
++ ++IGEG G V A K+ +A+KK+S Q E+ + R RH NI
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREI-KILLRFRHENI 87
Query: 501 VELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQE 560
+ + N+ + + + DL+ +D K + + L+ L+
Sbjct: 88 IGI----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKY 143
Query: 561 VCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLL--FSGSTNELSEGLLTAHGSGAPE- 617
+ ++H + K SN+LL+ +++ D GLA + T L E + T APE
Sbjct: 144 IHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVAT-RWYRAPEI 202
Query: 618 -FESGSYSCQSDVYSLGVVMLELLTGR 643
S Y+ D++S+G ++ E+L+ R
Sbjct: 203 MLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 92/207 (44%), Gaps = 11/207 (5%)
Query: 442 FSEGNFIGEGLLGSVYKAELPGGKL-LAVKKLSNTVSQRQTDEEFLELASTISRLRHGNI 500
++ ++IGEG G V A K+ +A+KK+S Q E+ + R RH NI
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREI-KILLRFRHENI 88
Query: 501 VELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQE 560
+ + N+ + + + DL+ +D K + + L+ L+
Sbjct: 89 IGI----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKY 144
Query: 561 VCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLL--FSGSTNELSEGLLTAHGSGAPE- 617
+ ++H + K SN+LL+ +++ D GLA + T L E + T APE
Sbjct: 145 IHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVAT-RWYRAPEI 203
Query: 618 -FESGSYSCQSDVYSLGVVMLELLTGR 643
S Y+ D++S+G ++ E+L+ R
Sbjct: 204 MLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 87/208 (41%), Gaps = 22/208 (10%)
Query: 448 IGEGLLGSVYKAE-LPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGY 506
IG+G G V+KA G+ +A+KK+ + L + L+H N+V LI
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 507 CNEH--------GQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYL 558
C G LV+D+ C HDL KF+ + RV L Y+
Sbjct: 86 CRTKASPYNRCKGSIYLVFDF---CE-HDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYI 141
Query: 559 QEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLA---PLLFSGSTNELSEGLLTAHGSGA 615
I+H + K++N+L+ +++++D GLA L + N ++T
Sbjct: 142 HR---NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTL-WYRP 197
Query: 616 PEFESGS--YSCQSDVYSLGVVMLELLT 641
PE G Y D++ G +M E+ T
Sbjct: 198 PELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 116/294 (39%), Gaps = 58/294 (19%)
Query: 440 NSFSEGNFIGEGLLGSVYKAELPG-GKLLA---VKKLSNTVSQRQTDEEFLELASTISR- 494
+ + G +G G V K G GK A +KK + S+R E +E I R
Sbjct: 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 64
Query: 495 LRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARA 554
+RH NI+ L +L+ + L D L E +L A
Sbjct: 65 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKE--------------SLTEDEA 110
Query: 555 LQYLQEVCE-------PPIVHGNFKSSNILLDEKLI----VRVSDCGLAPLLFSGSTNEL 603
Q+L+++ + I H + K NI+L +K + +++ D G+A + +G NE
Sbjct: 111 TQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAG--NEF 168
Query: 604 SEGLLTAHGSGAPEF---ESGSYS---CQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSL 657
G PEF E +Y ++D++S+GV+ LL+G P+ L
Sbjct: 169 KNIF------GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF----------L 212
Query: 658 VRWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSE 711
L +I A V+ D Y + + D I R + +P R +++
Sbjct: 213 GETKQETLTNISA----VNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQ 262
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 97/224 (43%), Gaps = 23/224 (10%)
Query: 448 IGEGLLGSVYKAE-LPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRL-RHGNIVELIG 505
+GEG V E L G A+K++ + Q D E + + + RL H NI+ L+
Sbjct: 37 LGEGGFSYVDLVEGLHDGHFYALKRI---LCHEQQDREEAQREADMHRLFNHPNILRLVA 93
Query: 506 YC-NEHG---QHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEV 561
YC E G + L+ + TL + + ++ + + + + LG R L+ +
Sbjct: 94 YCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHA- 152
Query: 562 CEPPIVHGNFKSSNILLDEK---LIVRVSDCGLAPLLFSGSTNELSEGLLTAH----GSG 614
H + K +NILL ++ +++ + A + GS L+ A
Sbjct: 153 --KGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYR 210
Query: 615 APEFESGSYSC----QSDVYSLGVVMLELLTGRKPYDRSRPRGE 654
APE S C ++DV+SLG V+ ++ G PYD +G+
Sbjct: 211 APELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGD 254
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 93/209 (44%), Gaps = 15/209 (7%)
Query: 442 FSEGNFIGEGLLGSVYKAELPGGKL-LAVKKLSNTVSQRQTDEEFLELASTISRLRHGNI 500
++ ++IGEG G V A K+ +A+KK+S Q E+ ++ RH NI
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLA-FRHENI 85
Query: 501 VELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQE 560
+ + N+ + + + DL+ +D K + + L+ L+
Sbjct: 86 IGI----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKY 141
Query: 561 VCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG----AP 616
+ ++H + K SN+LL+ +++ D GLA + + G LT + + AP
Sbjct: 142 IHSANVLHRDLKPSNLLLNTTSDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAP 198
Query: 617 E--FESGSYSCQSDVYSLGVVMLELLTGR 643
E S Y+ D++S+G ++ E+L+ R
Sbjct: 199 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 95/229 (41%), Gaps = 44/229 (19%)
Query: 440 NSFSEGNFIGEGLLGSVYKAELPG-GKLLA---VKKLSNTVSQRQTDEEFLELASTISR- 494
+ + G +G G V K G GK A +KK + S+R E +E I R
Sbjct: 12 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 71
Query: 495 LRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARA 554
+RH NI+ L +L+ + L D L E +L A
Sbjct: 72 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKE--------------SLTEDEA 117
Query: 555 LQYLQEVCE-------PPIVHGNFKSSNILLDEKLI----VRVSDCGLAPLLFSGSTNEL 603
Q+L+++ + I H + K NI+L +K + +++ D G+A + +G NE
Sbjct: 118 TQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAG--NEF 175
Query: 604 SEGLLTAHGSGAPEF---ESGSYS---CQSDVYSLGVVMLELLTGRKPY 646
G PEF E +Y ++D++S+GV+ LL+G P+
Sbjct: 176 KNIF------GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 87/208 (41%), Gaps = 22/208 (10%)
Query: 448 IGEGLLGSVYKAE-LPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGY 506
IG+G G V+KA G+ +A+KK+ + L + L+H N+V LI
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 84
Query: 507 CNEH--------GQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYL 558
C G LV+D+ C HDL KF+ + RV L Y+
Sbjct: 85 CRTKASPYNRCKGSIYLVFDF---CE-HDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYI 140
Query: 559 QEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLA---PLLFSGSTNELSEGLLTAHGSGA 615
I+H + K++N+L+ +++++D GLA L + N ++T
Sbjct: 141 HR---NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTL-WYRP 196
Query: 616 PEFESGS--YSCQSDVYSLGVVMLELLT 641
PE G Y D++ G +M E+ T
Sbjct: 197 PELLLGERDYGPPIDLWGAGCIMAEMWT 224
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 92/217 (42%), Gaps = 34/217 (15%)
Query: 445 GNFIGEGLLGSVYKAE--LPGGKLLAVKKLSNTVSQRQTDEEFLELASTISR-------L 495
G+ +G G G V E L G K+ AVK L+ RQ L++ I R
Sbjct: 16 GDTLGVGTFGKVKIGEHQLTGHKV-AVKILN-----RQKIRS-LDVVGKIKREIQNLKLF 68
Query: 496 RHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARAL 555
RH +I++L + +V +Y L D + H + R+ A+
Sbjct: 69 RHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICK----HGRVEEMEARRLFQQILSAV 124
Query: 556 QYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGS-- 613
Y +VH + K N+LLD + +++D GL+ ++ G E L + GS
Sbjct: 125 DYCHR---HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG------EFLRDSCGSPN 175
Query: 614 -GAPEFESGSYSC--QSDVYSLGVVMLELLTGRKPYD 647
APE SG + D++S GV++ LL G P+D
Sbjct: 176 YAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 88/205 (42%), Gaps = 23/205 (11%)
Query: 448 IGEGLLGSV---YKAELPGGKLLAVKKLS----NTVSQRQTDEEFLELASTISRLRHGNI 500
+G G GSV Y A L + +AVKKLS + + R+T E + L+H N+
Sbjct: 28 VGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRTYREL----RLLKHLKHENV 81
Query: 501 VELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQE 560
IG + + D+ + L+ +D K V + L+ L+
Sbjct: 82 ---IGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKY 138
Query: 561 VCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFES 620
+ I+H + K SN+ ++E +R+ D GLA +E G + APE
Sbjct: 139 IHSAGIIHRDLKPSNVAVNEDCELRILDFGLA-----RQADEEMTGYVATRWYRAPEIML 193
Query: 621 G--SYSCQSDVYSLGVVMLELLTGR 643
Y+ D++S+G +M ELL G+
Sbjct: 194 NWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 93/213 (43%), Gaps = 39/213 (18%)
Query: 448 IGEGLLGSV---YKAELPGGKLLAVKKLS----NTVSQRQTDEEFLELASTISRLRHGNI 500
+G G GSV Y A L + +AVKKLS + + R+T E + L+H N+
Sbjct: 36 VGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRTYREL----RLLKHLKHENV 89
Query: 501 VELIGY------CNEHGQHLLVYDYGGNCTLHDLLHSD--EEAHKKFSWNIRIRVALGAA 552
+ L+ + + LV G L++++ S + H +F +
Sbjct: 90 IGLLDVFTPATSIEDFSEVYLVTTLMG-ADLNNIVKSQALSDEHVQF-------LVYQLL 141
Query: 553 RALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHG 612
R L+Y+ I+H + K SN+ ++E +R+ D GLA +E G +
Sbjct: 142 RGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLA-----RQADEEMTGYVATRW 193
Query: 613 SGAPEFESG--SYSCQSDVYSLGVVMLELLTGR 643
APE Y+ D++S+G +M ELL G+
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 95/213 (44%), Gaps = 35/213 (16%)
Query: 448 IGEGLLGSVYK-AELPGGKLLAVKKLSNTVSQRQTDEEFLELA-STISRLRHGNIVELIG 505
+G G G V++ E G A K + ++ ++D+E + T+S LRH +V L
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFV---MTPHESDKETVRKEIQTMSVLRHPTLVNLHD 221
Query: 506 YCNEHGQHLLVYDY--GGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVC- 562
+ + +++Y++ GG +L + H K S + A++Y+++VC
Sbjct: 222 AFEDDNEMVMIYEFMSGG-----ELFEKVADEHNKMSED----------EAVEYMRQVCK 266
Query: 563 ------EPPIVHGNFKSSNILLDEKLI--VRVSDCGLAPLLFSGSTNELSEGLLTAHGSG 614
E VH + K NI+ K +++ D GL L + +++ G
Sbjct: 267 GLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEF---A 323
Query: 615 APEFESGS-YSCQSDVYSLGVVMLELLTGRKPY 646
APE G +D++S+GV+ LL+G P+
Sbjct: 324 APEVAEGKPVGYYTDMWSVGVLSYILLSGLSPF 356
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 74/177 (41%), Gaps = 31/177 (17%)
Query: 480 QTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDY--GGNCTLHDLLHSD-EEAH 536
QT++ E AS H +V L + V +Y GG+ H E H
Sbjct: 57 QTEKHVFEQASN-----HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEH 111
Query: 537 KKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLF 596
+F + + AL YL E I++ + K N+LLD + ++++D G+
Sbjct: 112 ARF-------YSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMC---- 157
Query: 597 SGSTNELSEGLLTAHGSG-----APEFESGS-YSCQSDVYSLGVVMLELLTGRKPYD 647
L G T+ G APE G Y D ++LGV+M E++ GR P+D
Sbjct: 158 ---KEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 211
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 93/211 (44%), Gaps = 19/211 (9%)
Query: 442 FSEGNFIGEGLLGSVYKAELPGGKL-LAVKKLSNTVSQRQTDEEFLELASTISRLRHGNI 500
+++ +IGEG G V A K +A+KK+S Q E+ + R RH N+
Sbjct: 45 YTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREI-QILLRFRHENV 103
Query: 501 VELIGYCN----EHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQ 556
+ + E + + + L+ LL S + ++ + + R L+
Sbjct: 104 IGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFL-----YQILRGLK 158
Query: 557 YLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLL--FSGSTNELSEGLLTAHGSG 614
Y+ ++H + K SN+L++ +++ D GLA + T L+E + T
Sbjct: 159 YIHSAN---VLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVAT-RWYR 214
Query: 615 APE--FESGSYSCQSDVYSLGVVMLELLTGR 643
APE S Y+ D++S+G ++ E+L+ R
Sbjct: 215 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 90/219 (41%), Gaps = 27/219 (12%)
Query: 440 NSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRL--R 496
++F +G+G G V A + G L AVK L V + D E I L
Sbjct: 23 DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARN 82
Query: 497 HGNIVELIGYCNEHGQHLLVYDY--GGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARA 554
H + +L + V ++ GG+ H + ++F R AA
Sbjct: 83 HPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHI------QKSRRFD---EARARFYAAEI 133
Query: 555 LQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG 614
+ L + + I++ + K N+LLD + +++D G+ G N G+ TA G
Sbjct: 134 ISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCK---EGICN----GVTTATFCG 186
Query: 615 APEF------ESGSYSCQSDVYSLGVVMLELLTGRKPYD 647
P++ + Y D +++GV++ E+L G P++
Sbjct: 187 TPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFE 225
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 92/211 (43%), Gaps = 35/211 (16%)
Query: 448 IGEGLLGSVYKA-ELPGGKLLAVKKLS----NTVSQRQTDEEFLELASTISRLRHGNIVE 502
+G G GSV A + G +AVKKLS + + ++T E + ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYREL----RLLKHMKHENVIG 85
Query: 503 LIGY------CNEHGQHLLVYDYGGNCTLHDLLHSDE--EAHKKFSWNIRIRVALGAARA 554
L+ E LV G L++++ + + H +F + R
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQF-------LIYQILRG 137
Query: 555 LQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG 614
L+Y+ I+H + K SN+ ++E +++ D LA T++ G +
Sbjct: 138 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFYLA-----RHTDDEMTGYVATRWYR 189
Query: 615 APEFESG--SYSCQSDVYSLGVVMLELLTGR 643
APE Y+ D++S+G +M ELLTGR
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 115/294 (39%), Gaps = 58/294 (19%)
Query: 440 NSFSEGNFIGEGLLGSVYKAELPG-GKLLA---VKKLSNTVSQRQTDEEFLELASTISR- 494
+ + G +G G V K G GK A +KK S+R E +E I R
Sbjct: 26 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILRE 85
Query: 495 LRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARA 554
+RH NI+ L +L+ + L D L E +L A
Sbjct: 86 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKE--------------SLTEDEA 131
Query: 555 LQYLQEVCE-------PPIVHGNFKSSNILLDEKLI----VRVSDCGLAPLLFSGSTNEL 603
Q+L+++ + I H + K NI+L +K + +++ D G+A + +G NE
Sbjct: 132 TQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAG--NEF 189
Query: 604 SEGLLTAHGSGAPEF---ESGSYS---CQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSL 657
G PEF E +Y ++D++S+GV+ LL+G P+ L
Sbjct: 190 KNIF------GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF----------L 233
Query: 658 VRWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSE 711
L +I A V+ D Y + + D I R + +P R +++
Sbjct: 234 GETKQETLTNISA----VNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMXIAQ 283
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 95/213 (44%), Gaps = 35/213 (16%)
Query: 448 IGEGLLGSVYK-AELPGGKLLAVKKLSNTVSQRQTDEEFLELA-STISRLRHGNIVELIG 505
+G G G V++ E G A K + ++ ++D+E + T+S LRH +V L
Sbjct: 59 LGTGAFGVVHRVTERATGNNFAAKFV---MTPHESDKETVRKEIQTMSVLRHPTLVNLHD 115
Query: 506 YCNEHGQHLLVYDY--GGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVC- 562
+ + +++Y++ GG +L + H K S + A++Y+++VC
Sbjct: 116 AFEDDNEMVMIYEFMSGG-----ELFEKVADEHNKMSED----------EAVEYMRQVCK 160
Query: 563 ------EPPIVHGNFKSSNILLDEKLI--VRVSDCGLAPLLFSGSTNELSEGLLTAHGSG 614
E VH + K NI+ K +++ D GL L + +++ G
Sbjct: 161 GLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEF---A 217
Query: 615 APEFESGS-YSCQSDVYSLGVVMLELLTGRKPY 646
APE G +D++S+GV+ LL+G P+
Sbjct: 218 APEVAEGKPVGYYTDMWSVGVLSYILLSGLSPF 250
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 83/193 (43%), Gaps = 18/193 (9%)
Query: 464 GKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVEL------IGYCNEHGQHLLVY 517
G+ +A+K+ +S + + LE+ + +L H N+V + + LL
Sbjct: 40 GEQVAIKQCRQELSPKNRERWCLEI-QIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAM 98
Query: 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNIL 577
+Y L L+ E IR ++ + AL+YL E I+H + K NI+
Sbjct: 99 EYCEGGDLRKYLNQFENCCGLKEGPIRTLLS-DISSALRYLHE---NRIIHRDLKPENIV 154
Query: 578 LD---EKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEF-ESGSYSCQSDVYSLG 633
L ++LI ++ D G A L G EL + APE E Y+ D +S G
Sbjct: 155 LQPGPQRLIHKIIDLGYAKELDQG---ELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFG 211
Query: 634 VVMLELLTGRKPY 646
+ E +TG +P+
Sbjct: 212 TLAFECITGFRPF 224
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 83/193 (43%), Gaps = 18/193 (9%)
Query: 464 GKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVEL------IGYCNEHGQHLLVY 517
G+ +A+K+ +S + + LE+ + +L H N+V + + LL
Sbjct: 39 GEQVAIKQCRQELSPKNRERWCLEI-QIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAM 97
Query: 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNIL 577
+Y L L+ E IR ++ + AL+YL E I+H + K NI+
Sbjct: 98 EYCEGGDLRKYLNQFENCCGLKEGPIRTLLS-DISSALRYLHE---NRIIHRDLKPENIV 153
Query: 578 LD---EKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEF-ESGSYSCQSDVYSLG 633
L ++LI ++ D G A L G EL + APE E Y+ D +S G
Sbjct: 154 LQPGPQRLIHKIIDLGYAKELDQG---ELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFG 210
Query: 634 VVMLELLTGRKPY 646
+ E +TG +P+
Sbjct: 211 TLAFECITGFRPF 223
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 87/202 (43%), Gaps = 20/202 (9%)
Query: 448 IGEGLLGSVYKA-ELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGY 506
+GEG G VYKA + + +A+K++ + + S + L+H NI+EL
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSV 101
Query: 507 CNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEP-P 565
+ + + L+++Y N D + + + ++ +RV L C
Sbjct: 102 IHHNHRLHLIFEYAEN---------DLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRR 152
Query: 566 IVHGNFKSSNILL-----DEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFES 620
+H + K N+LL E ++++ D GLA F + + ++T PE
Sbjct: 153 CLHRDLKPQNLLLSVSDASETPVLKIGDFGLA-RAFGIPIRQFTHEIITL-WYRPPEILL 210
Query: 621 GS--YSCQSDVYSLGVVMLELL 640
GS YS D++S+ + E+L
Sbjct: 211 GSRHYSTSVDIWSIACIWAEML 232
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 117/299 (39%), Gaps = 42/299 (14%)
Query: 435 LQQYTNSFSE---GNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELAST 491
LQ++ F + G IG+G G VY G +A++ + + F
Sbjct: 25 LQEWDIPFEQLEIGELIGKGRFGQVYHGRWHGE--VAIRLIDIERDNEDQLKAFKREVMA 82
Query: 492 ISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGA 551
+ RH N+V +G C ++ TL+ ++ +A N ++A
Sbjct: 83 YRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVV---RDAKIVLDVNKTRQIAQEI 139
Query: 552 ARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAH 611
+ + YL I+H + KS N+ D +V ++D GL + + L +
Sbjct: 140 VKGMGYLHA---KGILHKDLKSKNVFYDNGKVV-ITDFGLFSISGVLQAGRREDKLRIQN 195
Query: 612 G---SGAPEF----------ESGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLV 658
G APE + +S SDV++LG + EL P+ +++P +
Sbjct: 196 GWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPF-KTQP---AEAI 251
Query: 659 RWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLL 717
W + + P+L + K +S DI+ C +E RP ++++ D+L
Sbjct: 252 IW---------QMGTGMKPNLSQIGMGKEIS---DILLFCWAFEQEERPTFTKLM-DML 297
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 75/178 (42%), Gaps = 33/178 (18%)
Query: 480 QTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDY--GGNCTLHDLLHSD--EEA 535
QT++ E AS H +V L + V +Y GG+ H EE
Sbjct: 68 QTEKHVFEQASN-----HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEH 122
Query: 536 HKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLL 595
+ +S I + AL YL E I++ + K N+LLD + ++++D G+
Sbjct: 123 ARFYSAEISL--------ALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMC--- 168
Query: 596 FSGSTNELSEGLLTAHGSG-----APEFESGS-YSCQSDVYSLGVVMLELLTGRKPYD 647
L G T+ G APE G Y D ++LGV+M E++ GR P+D
Sbjct: 169 ----KEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 222
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 74/177 (41%), Gaps = 31/177 (17%)
Query: 480 QTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDY--GGNCTLHDLLHSD-EEAH 536
QT++ E AS H +V L + V +Y GG+ H E H
Sbjct: 53 QTEKHVFEQASN-----HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEH 107
Query: 537 KKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLF 596
+F + + AL YL E I++ + K N+LLD + ++++D G+
Sbjct: 108 ARF-------YSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMC---- 153
Query: 597 SGSTNELSEGLLTAHGSG-----APEFESGS-YSCQSDVYSLGVVMLELLTGRKPYD 647
L G T+ G APE G Y D ++LGV+M E++ GR P+D
Sbjct: 154 ---KEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 207
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 88/205 (42%), Gaps = 23/205 (11%)
Query: 448 IGEGLLGSV---YKAELPGGKLLAVKKLS----NTVSQRQTDEEFLELASTISRLRHGNI 500
+G G GSV Y A L + +AVKKLS + + R+T E + L+H N+
Sbjct: 36 VGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRTYREL----RLLKHLKHENV 89
Query: 501 VELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQE 560
IG + + D+ + L+ +D K V + L+ L+
Sbjct: 90 ---IGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKY 146
Query: 561 VCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFES 620
+ I+H + K SN+ ++E +R+ D GLA +E G + APE
Sbjct: 147 IHSAGIIHRDLKPSNVAVNEDSELRILDFGLA-----RQADEEMTGYVATRWYRAPEIML 201
Query: 621 G--SYSCQSDVYSLGVVMLELLTGR 643
Y+ D++S+G +M ELL G+
Sbjct: 202 NWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 61/157 (38%), Gaps = 28/157 (17%)
Query: 567 VHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPE-FESGSYSC 625
+H + + NILL EK +V++ D GLA ++ APE Y+
Sbjct: 213 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 272
Query: 626 QSDVYSLGVVMLELLT-GRKPY-----DRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSL 679
QSDV+S GV++ E+ + G PY D R + R P + M+D
Sbjct: 273 QSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD--- 329
Query: 680 DGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDL 716
C EP RP SE+V+ L
Sbjct: 330 ------------------CWHGEPSQRPTFSELVEHL 348
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 6/78 (7%)
Query: 445 GNFIGEGLLGSVYKAELPG------GKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHG 498
G +G G G V +A+ G + +AVK L + + EL I H
Sbjct: 25 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 84
Query: 499 NIVELIGYCNEHGQHLLV 516
N+V L+G C + G L+V
Sbjct: 85 NVVNLLGACTKPGGPLMV 102
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 76/177 (42%), Gaps = 31/177 (17%)
Query: 480 QTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDY--GGNCTLHDLLHSD-EEAH 536
QT++ E AS H +V L + V +Y GG+ H E H
Sbjct: 100 QTEKHVFEQASN-----HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEH 154
Query: 537 KKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLF 596
+F ++ I +AL YL E I++ + K N+LLD + ++++D G+
Sbjct: 155 ARF-YSAEISLALN------YLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMC---- 200
Query: 597 SGSTNELSEGLLTAHGSG-----APEFESGS-YSCQSDVYSLGVVMLELLTGRKPYD 647
L G T+ G APE G Y D ++LGV+M E++ GR P+D
Sbjct: 201 ---KEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 254
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 61/157 (38%), Gaps = 28/157 (17%)
Query: 567 VHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPE-FESGSYSC 625
+H + + NILL EK +V++ D GLA ++ APE Y+
Sbjct: 215 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 274
Query: 626 QSDVYSLGVVMLELLT-GRKPY-----DRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSL 679
QSDV+S GV++ E+ + G PY D R + R P + M+D
Sbjct: 275 QSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD--- 331
Query: 680 DGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDL 716
C EP RP SE+V+ L
Sbjct: 332 ------------------CWHGEPSQRPTFSELVEHL 350
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 6/78 (7%)
Query: 445 GNFIGEGLLGSVYKAELPG------GKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHG 498
G +G G G V +A+ G + +AVK L + + EL I H
Sbjct: 27 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 86
Query: 499 NIVELIGYCNEHGQHLLV 516
N+V L+G C + G L+V
Sbjct: 87 NVVNLLGACTKPGGPLMV 104
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 61/157 (38%), Gaps = 28/157 (17%)
Query: 567 VHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPE-FESGSYSC 625
+H + + NILL EK +V++ D GLA ++ APE Y+
Sbjct: 220 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 279
Query: 626 QSDVYSLGVVMLELLT-GRKPY-----DRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSL 679
QSDV+S GV++ E+ + G PY D R + R P + M+D
Sbjct: 280 QSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD--- 336
Query: 680 DGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDL 716
C EP RP SE+V+ L
Sbjct: 337 ------------------CWHGEPSQRPTFSELVEHL 355
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 6/78 (7%)
Query: 445 GNFIGEGLLGSVYKAELPG------GKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHG 498
G +G G G V +A+ G + +AVK L + + EL I H
Sbjct: 32 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 91
Query: 499 NIVELIGYCNEHGQHLLV 516
N+V L+G C + G L+V
Sbjct: 92 NVVNLLGACTKPGGPLMV 109
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 61/157 (38%), Gaps = 28/157 (17%)
Query: 567 VHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPE-FESGSYSC 625
+H + + NILL EK +V++ D GLA ++ APE Y+
Sbjct: 222 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 281
Query: 626 QSDVYSLGVVMLELLT-GRKPY-----DRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSL 679
QSDV+S GV++ E+ + G PY D R + R P + M+D
Sbjct: 282 QSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD--- 338
Query: 680 DGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDL 716
C EP RP SE+V+ L
Sbjct: 339 ------------------CWHGEPSQRPTFSELVEHL 357
Score = 30.0 bits (66), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 6/78 (7%)
Query: 445 GNFIGEGLLGSVYKAELPG------GKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHG 498
G +G G G V +A+ G + +AVK L + + EL I H
Sbjct: 34 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 93
Query: 499 NIVELIGYCNEHGQHLLV 516
N+V L+G C + G L+V
Sbjct: 94 NVVNLLGACTKPGGPLMV 111
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 97/233 (41%), Gaps = 44/233 (18%)
Query: 436 QQYTNSFSEGNFIGEGLLGSVYKA-ELPGGKLLA---VKKLSNTVSQRQTDEEFLELAST 491
Q+ + + G +G G V K E G A +KK + S+R E +E +
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 492 ISR-LRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALG 550
I R + H N++ L +L+ + L D L E +L
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE--------------SLS 113
Query: 551 AARALQYLQEVCE-------PPIVHGNFKSSNILLDEKLI----VRVSDCGLAPLLFSGS 599
A +++++ + I H + K NI+L +K I +++ D GLA
Sbjct: 114 EEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA------- 166
Query: 600 TNELSEGLLTAHGSGAPEF---ESGSYS---CQSDVYSLGVVMLELLTGRKPY 646
+E+ +G+ + G PEF E +Y ++D++S+GV+ LL+G P+
Sbjct: 167 -HEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 86/204 (42%), Gaps = 6/204 (2%)
Query: 448 IGEGLLGSVYKAELPG-GKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVE---- 502
IG G G K GK+L K+L + + + + L+H NIV
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 503 LIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVC 562
+I N ++ Y GG+ + E + + +R+ L A + +
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 563 EPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFESGS 622
++H + K +N+ LD K V++ D GLA +L + + E + T + + S
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL-NHDEDFAKEFVGTPYYMSPEQMNRMS 192
Query: 623 YSCQSDVYSLGVVMLELLTGRKPY 646
Y+ +SD++SLG ++ EL P+
Sbjct: 193 YNEKSDIWSLGCLLYELCALMPPF 216
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 92/211 (43%), Gaps = 35/211 (16%)
Query: 448 IGEGLLGSVYKA-ELPGGKLLAVKKLS----NTVSQRQTDEEFLELASTISRLRHGNIVE 502
+G G GSV A + G +AVKKLS + + ++T E + ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL----RLLKHMKHENVIG 85
Query: 503 LIGY------CNEHGQHLLVYDYGGNCTLHDLLHSDE--EAHKKFSWNIRIRVALGAARA 554
L+ E LV G L++++ + + H +F + R
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQF-------LIYQILRG 137
Query: 555 LQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG 614
L+Y+ I+H + K SN+ ++E +++ GLA T++ G +
Sbjct: 138 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILGFGLA-----RHTDDEMTGYVATRWYR 189
Query: 615 APEFESG--SYSCQSDVYSLGVVMLELLTGR 643
APE Y+ D++S+G +M ELLTGR
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 86/208 (41%), Gaps = 22/208 (10%)
Query: 448 IGEGLLGSVYKAE-LPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGY 506
IG+G G V+KA G+ +A+KK+ + L + L+H N+V LI
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 507 CNEHGQHL--------LVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYL 558
C LV+D+ C HDL KF+ + RV L Y+
Sbjct: 86 CRTKASPYNRCKASIYLVFDF---CE-HDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYI 141
Query: 559 QEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLA---PLLFSGSTNELSEGLLTAHGSGA 615
I+H + K++N+L+ +++++D GLA L + N ++T
Sbjct: 142 HR---NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTL-WYRP 197
Query: 616 PEFESGS--YSCQSDVYSLGVVMLELLT 641
PE G Y D++ G +M E+ T
Sbjct: 198 PELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 97/233 (41%), Gaps = 44/233 (18%)
Query: 436 QQYTNSFSEGNFIGEGLLGSVYKA-ELPGGKLLA---VKKLSNTVSQRQTDEEFLELAST 491
Q+ + + G +G G V K E G A +KK + S+R E +E +
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 492 ISR-LRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALG 550
I R + H N++ L +L+ + L D L E +L
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE--------------SLS 113
Query: 551 AARALQYLQEVCE-------PPIVHGNFKSSNILLDEKLI----VRVSDCGLAPLLFSGS 599
A +++++ + I H + K NI+L +K I +++ D GLA
Sbjct: 114 EEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA------- 166
Query: 600 TNELSEGLLTAHGSGAPEF---ESGSYS---CQSDVYSLGVVMLELLTGRKPY 646
+E+ +G+ + G PEF E +Y ++D++S+GV+ LL+G P+
Sbjct: 167 -HEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 86/204 (42%), Gaps = 6/204 (2%)
Query: 448 IGEGLLGSVYKAELPG-GKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVE---- 502
IG G G K GK+L K+L + + + + L+H NIV
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 503 LIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVC 562
+I N ++ Y GG+ + E + + +R+ L A + +
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 563 EPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFESGS 622
++H + K +N+ LD K V++ D GLA +L + T+ + T + + S
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL-NHDTSFAKTFVGTPYYMSPEQMNRMS 192
Query: 623 YSCQSDVYSLGVVMLELLTGRKPY 646
Y+ +SD++SLG ++ EL P+
Sbjct: 193 YNEKSDIWSLGCLLYELCALMPPF 216
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 101/234 (43%), Gaps = 37/234 (15%)
Query: 439 TNSFSEGNFIGEGLLGSVYKAELPGG-KLLAVKKLSNTVSQRQTDEEFLELASTISRLRH 497
++ F + +G G VY+ + G K A+K L TV ++ E + RL H
Sbjct: 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEI----GVLLRLSH 107
Query: 498 GNIVELIGYCNEHGQHLLVYDYGGNCTLHDLL-----HSDEEAHKKFSWNIRIRVALGAA 552
NI++L + LV + L D + +S+ +A A
Sbjct: 108 PNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDA------------ADAVK 155
Query: 553 RALQYLQEVCEPPIVHGNFKSSNILL-----DEKLIVRVSDCGLAPLLFSGSTNELSEGL 607
+ L+ + + E IVH + K N+L D L +++D GL+ ++ L + +
Sbjct: 156 QILEAVAYLHENGIVHRDLKPENLLYATPAPDAPL--KIADFGLSKIV---EHQVLMKTV 210
Query: 608 LTAHGSGAPEFESG-SYSCQSDVYSLGVVMLELLTGRKP-YDRSRPRGEQSLVR 659
G APE G +Y + D++S+G++ LL G +P YD RG+Q + R
Sbjct: 211 CGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDE---RGDQFMFR 261
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 86/204 (42%), Gaps = 6/204 (2%)
Query: 448 IGEGLLGSVYKAELPG-GKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVE---- 502
IG G G K GK+L K+L + + + + L+H NIV
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 503 LIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVC 562
+I N ++ Y GG+ + E + + +R+ L A + +
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 563 EPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFESGS 622
++H + K +N+ LD K V++ D GLA +L + T+ + T + + S
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL-NHDTSFAKAFVGTPYYMSPEQMNRMS 192
Query: 623 YSCQSDVYSLGVVMLELLTGRKPY 646
Y+ +SD++SLG ++ EL P+
Sbjct: 193 YNEKSDIWSLGCLLYELCALMPPF 216
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 91/212 (42%), Gaps = 27/212 (12%)
Query: 448 IGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIV---EL 503
IG G G V A G+ +A+KK+ N + L + +H NI+ ++
Sbjct: 63 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDI 122
Query: 504 IGYCNEHGQHLLVYDYGG--NCTLHDLLHSDE----EAHKKFSWNIRIRVALGAARALQY 557
+ +G+ VY LH ++HS + E + F + + R L+Y
Sbjct: 123 LRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQL--------LRGLKY 174
Query: 558 LQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNE---LSEGLLTAHGSG 614
+ ++H + K SN+L++E +++ D G+A L + ++E + T
Sbjct: 175 MHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVAT-RWYR 230
Query: 615 APE--FESGSYSCQSDVYSLGVVMLELLTGRK 644
APE Y+ D++S+G + E+L R+
Sbjct: 231 APELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 89/221 (40%), Gaps = 38/221 (17%)
Query: 447 FIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIG- 505
IG G G+VYK L + +AVK S Q +E+ + + + H NI I
Sbjct: 20 LIGRGRYGAVYKGSL-DERPVAVKVFSFANRQNFINEKNI---YRVPLMEHDNIARFIVG 75
Query: 506 ----YCNEHGQHLLVYDYGGNCTLHDLL--HSDEEAHKKFSWNIRIRVALGAARALQYLQ 559
+ ++LLV +Y N +L L H+ + W R+A R L YL
Sbjct: 76 DERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSD-------WVSSCRLAHSVTRGLAYLH 128
Query: 560 ------EVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLA------PLLFSGSTNELSEGL 607
+ +P I H + S N+L+ +SD GL+ L+ G + +
Sbjct: 129 TELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISE 188
Query: 608 LTAHGSGAPEFESGSYSC--------QSDVYSLGVVMLELL 640
+ APE G+ + Q D+Y+LG++ E+
Sbjct: 189 VGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 97/234 (41%), Gaps = 45/234 (19%)
Query: 436 QQYTNSFSE-GNFIGEGLLGSVYKA-ELPGGKLLA---VKKLSNTVSQRQTDEEFLELAS 490
QQ F + G +G G V K E G A +KK + S+R E +E
Sbjct: 7 QQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREV 66
Query: 491 TISR-LRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVAL 549
+I R + H N++ L +L+ + L D L E +L
Sbjct: 67 SILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE--------------SL 112
Query: 550 GAARALQYLQEVCE-------PPIVHGNFKSSNILLDEKLI----VRVSDCGLAPLLFSG 598
A +++++ + I H + K NI+L +K I +++ D GLA
Sbjct: 113 SEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA------ 166
Query: 599 STNELSEGLLTAHGSGAPEF---ESGSYS---CQSDVYSLGVVMLELLTGRKPY 646
+E+ +G+ + G PEF E +Y ++D++S+GV+ LL+G P+
Sbjct: 167 --HEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 97/233 (41%), Gaps = 44/233 (18%)
Query: 436 QQYTNSFSEGNFIGEGLLGSVYKA-ELPGGKLLA---VKKLSNTVSQRQTDEEFLELAST 491
Q+ + + G +G G V K E G A +KK + S+R E +E +
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 492 ISR-LRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALG 550
I R + H N++ L +L+ + L D L E +L
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE--------------SLS 113
Query: 551 AARALQYLQEVCE-------PPIVHGNFKSSNILLDEKLI----VRVSDCGLAPLLFSGS 599
A +++++ + I H + K NI+L +K I +++ D GLA
Sbjct: 114 EEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA------- 166
Query: 600 TNELSEGLLTAHGSGAPEF---ESGSYS---CQSDVYSLGVVMLELLTGRKPY 646
+E+ +G+ + G PEF E +Y ++D++S+GV+ LL+G P+
Sbjct: 167 -HEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 88/231 (38%), Gaps = 31/231 (13%)
Query: 432 IASLQQYTNSFSEGNFIGEGLLGSVYKAELPGG-KLLAVKKLSN-TVSQRQTDEEFLELA 489
+ ++ + F IG G G V +L K+ A+K L+ + +R F E
Sbjct: 66 VKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREER 125
Query: 490 STISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDE----EAHKKFSWNIRI 545
+ I L + LV DY L LL E E +F + +
Sbjct: 126 DVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARF-YLAEM 184
Query: 546 RVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS-------- 597
+A+ + L Y VH + K NIL+D +R++D G L
Sbjct: 185 VIAIDSVHQLHY---------VHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSV 235
Query: 598 --GSTNELSEGLLTAHGSGAPEFESGSYSCQSDVYSLGVVMLELLTGRKPY 646
G+ + +S +L A G G Y + D +SLGV M E+L G P+
Sbjct: 236 AVGTPDYISPEILQAMEGG-----KGRYGPECDWWSLGVCMYEMLYGETPF 281
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 97/233 (41%), Gaps = 44/233 (18%)
Query: 436 QQYTNSFSEGNFIGEGLLGSVYKA-ELPGGKLLA---VKKLSNTVSQRQTDEEFLELAST 491
Q+ + + G +G G V K E G A +KK + S+R E +E +
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 492 ISR-LRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALG 550
I R + H N++ L +L+ + L D L E +L
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE--------------SLS 113
Query: 551 AARALQYLQEVCE-------PPIVHGNFKSSNILLDEKLI----VRVSDCGLAPLLFSGS 599
A +++++ + I H + K NI+L +K I +++ D GLA
Sbjct: 114 EEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA------- 166
Query: 600 TNELSEGLLTAHGSGAPEF---ESGSYS---CQSDVYSLGVVMLELLTGRKPY 646
+E+ +G+ + G PEF E +Y ++D++S+GV+ LL+G P+
Sbjct: 167 -HEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 91/212 (42%), Gaps = 27/212 (12%)
Query: 448 IGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIV---EL 503
IG G G V A G+ +A+KK+ N + L + +H NI+ ++
Sbjct: 62 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDI 121
Query: 504 IGYCNEHGQHLLVYDYGG--NCTLHDLLHSDE----EAHKKFSWNIRIRVALGAARALQY 557
+ +G+ VY LH ++HS + E + F + + R L+Y
Sbjct: 122 LRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQL--------LRGLKY 173
Query: 558 LQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNE---LSEGLLTAHGSG 614
+ ++H + K SN+L++E +++ D G+A L + ++E + T
Sbjct: 174 MHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVAT-RWYR 229
Query: 615 APE--FESGSYSCQSDVYSLGVVMLELLTGRK 644
APE Y+ D++S+G + E+L R+
Sbjct: 230 APELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 96/218 (44%), Gaps = 20/218 (9%)
Query: 440 NSFSEGNFIGEGLLGSVYKA-ELPG---GKLLAVK--KLSNTVSQRQTDEEFLELASTIS 493
+F +G G G V+ ++ G GKL A+K K + V + +T E +
Sbjct: 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 113
Query: 494 RLRHGNIVELIGYCNEHGQHL-LVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGA- 551
+R + + Y + L L+ DY L L E +F+ + +++ +G
Sbjct: 114 HIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRE----RFTEH-EVQIYVGEI 168
Query: 552 ARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAH 611
AL++L ++ I++ + K NILLD V ++D GL+ + T + T
Sbjct: 169 VLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIE 225
Query: 612 GSGAPEFESGSYSCQS---DVYSLGVVMLELLTGRKPY 646
AP+ G S D +SLGV+M ELLTG P+
Sbjct: 226 -YMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPF 262
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 84/211 (39%), Gaps = 26/211 (12%)
Query: 438 YTNSFSEGNFIGEGLLGSVYKAE-LPGGKLLAVKK-LSNTVSQRQTDEEFLELASTISRL 495
+ SF + +G G G V+K G+L AVK+ +S + + E+ S
Sbjct: 55 FQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVG 114
Query: 496 RHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARAL 555
+H V L ++ GG L L +W +L A+
Sbjct: 115 QHPCCVRLE----------QAWEEGGILYLQTELCGPSLQQHCEAWG----ASLPEAQVW 160
Query: 556 QYLQEVC-------EPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLL 608
YL++ +VH + K +NI L + ++ D GL L + E+ EG
Sbjct: 161 GYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDP 220
Query: 609 TAHGSGAPEFESGSYSCQSDVYSLGVVMLEL 639
APE GSY +DV+SLG+ +LE+
Sbjct: 221 RYM---APELLQGSYGTAADVFSLGLTILEV 248
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 32/211 (15%)
Query: 448 IGEGLLGSV----YKAELPG-GKLLAVKKLS-----NTVSQRQTDEEFLELASTISRLRH 497
+GEG G V Y E G+ +AVK L N ++ + + E L L H
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILR------NLYH 82
Query: 498 GNIVELIGYCNEHGQH--LLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARAL 555
NIV+ G C E G + L+ ++ + +L + L ++ K + +++ A+ + +
Sbjct: 83 ENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNK---NKINLKQQLKYAVQICKGM 139
Query: 556 QYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG- 614
YL VH + + N+L++ + V++ D GL + T++ + S
Sbjct: 140 DYLGS---RQYVHRDLAARNVLVESEHQVKIGDFGLTKAI---ETDKEXXTVKDDRDSPV 193
Query: 615 ---APE-FESGSYSCQSDVYSLGVVMLELLT 641
APE + SDV+S GV + ELLT
Sbjct: 194 FWYAPECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 97/234 (41%), Gaps = 45/234 (19%)
Query: 436 QQYTNSFSE-GNFIGEGLLGSVYKA-ELPGGKLLA---VKKLSNTVSQRQTDEEFLELAS 490
QQ F + G +G G V K E G A +KK + S+R E +E
Sbjct: 7 QQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREV 66
Query: 491 TISR-LRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVAL 549
+I R + H NI+ L +L+ + L D L E +L
Sbjct: 67 SILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKE--------------SL 112
Query: 550 GAARALQYLQEVCE-------PPIVHGNFKSSNILLDEKLI----VRVSDCGLAPLLFSG 598
A +++++ + I H + K NI+L +K I +++ D GLA
Sbjct: 113 SEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA------ 166
Query: 599 STNELSEGLLTAHGSGAPEF---ESGSYS---CQSDVYSLGVVMLELLTGRKPY 646
+E+ +G+ + G PEF E +Y ++D++S+GV+ LL+G P+
Sbjct: 167 --HEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 99/230 (43%), Gaps = 13/230 (5%)
Query: 438 YTNSFSEGNFIGEGLLGSVYKA-ELPGGKLLAVKKL---SNTVSQRQTDEEFLELASTIS 493
+ + + IG+G V + G+ AVK + T S + E+ AS
Sbjct: 22 FEDVYELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICH 81
Query: 494 RLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAAR 553
L+H +IVEL+ + G +V+++ L + +A +S +
Sbjct: 82 MLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILE 141
Query: 554 ALQYLQEVCEPPIVHGNFKSSNILLDEK---LIVRVSDCGLAPLLFSGSTNELSEGLLTA 610
AL+Y + I+H + K N+LL K V++ D G+A L G + ++ G +
Sbjct: 142 ALRYCH---DNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQL--GESGLVAGGRVGT 196
Query: 611 HGSGAPE-FESGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVR 659
APE + Y DV+ GV++ LL+G P+ ++ R + +++
Sbjct: 197 PHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIK 246
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 86/201 (42%), Gaps = 16/201 (7%)
Query: 448 IGEGLLGSVYKA-ELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGY 506
+G G GSV A + G+ +A+KKLS + + ++H N++ L+
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 91
Query: 507 CNEHGQHLLVYDYGGNCTLHDLLHSDEEAHK--KFSWNIRIRVALGAARALQYLQEVCEP 564
YD+ + + +D + KFS + + L+Y+
Sbjct: 92 FTPASSLRNFYDF---YLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAG-- 146
Query: 565 PIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPE--FESGS 622
+VH + K N+ ++E +++ D GLA + E++ G + APE
Sbjct: 147 -VVHRDLKPGNLAVNEDCELKILDFGLA----RHADAEMT-GYVVTRWYRAPEVILSWMH 200
Query: 623 YSCQSDVYSLGVVMLELLTGR 643
Y+ D++S+G +M E+LTG+
Sbjct: 201 YNQTVDIWSVGCIMAEMLTGK 221
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 99/240 (41%), Gaps = 27/240 (11%)
Query: 439 TNSFSEGNFIGEGLLGSVYKA-ELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRH 497
++ F + +GEG G V A P G+++A+KK+ E+ + +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREI-KILKHFKH 68
Query: 498 GNIVELIGYCN----EHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAAR 553
NI+ + E+ + + LH ++ + + + I R
Sbjct: 69 ENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFI-----YQTLR 123
Query: 554 ALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLF---------SGSTNELS 604
A++ L ++H + K SN+L++ ++V D GLA ++ +G + ++
Sbjct: 124 AVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMT 180
Query: 605 EGLLTAHGSGAPE--FESGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAI 662
E + T APE S YS DV+S G ++ EL R+P R Q L+ + I
Sbjct: 181 EXVAT-RWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPIFPGRDYRHQLLLIFGI 238
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 32/211 (15%)
Query: 448 IGEGLLGSV----YKAELPG-GKLLAVKKLS-----NTVSQRQTDEEFLELASTISRLRH 497
+GEG G V Y E G+ +AVK L N ++ + + E L L H
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILR------NLYH 70
Query: 498 GNIVELIGYCNEHGQH--LLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARAL 555
NIV+ G C E G + L+ ++ + +L + L ++ K + +++ A+ + +
Sbjct: 71 ENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNK---NKINLKQQLKYAVQICKGM 127
Query: 556 QYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG- 614
YL VH + + N+L++ + V++ D GL + T++ + S
Sbjct: 128 DYLGS---RQYVHRDLAARNVLVESEHQVKIGDFGLTKAI---ETDKEXXTVKDDRDSPV 181
Query: 615 ---APE-FESGSYSCQSDVYSLGVVMLELLT 641
APE + SDV+S GV + ELLT
Sbjct: 182 FWYAPECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/201 (18%), Positives = 85/201 (42%), Gaps = 6/201 (2%)
Query: 448 IGEGLLGSVYKAE-LPGGKLLAVKKLS-NTVSQRQTDEEFLELASTISRLRHGNIVELIG 505
IG G VY+A L G +A+KK+ + + + ++ + +L H N+++
Sbjct: 40 IGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYA 99
Query: 506 YCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPP 565
E + +V + L ++ ++ + + + AL+++
Sbjct: 100 SFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---R 156
Query: 566 IVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFESGSYSC 625
++H + K +N+ + +V++ D GL FS T + T + Y+
Sbjct: 157 VMHRDIKPANVFITATGVVKLGDLGLG-RFFSSKTTAAHSLVGTPYYMSPERIHENGYNF 215
Query: 626 QSDVYSLGVVMLELLTGRKPY 646
+SD++SLG ++ E+ + P+
Sbjct: 216 KSDIWSLGCLLYEMAALQSPF 236
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 87/199 (43%), Gaps = 12/199 (6%)
Query: 448 IGEGLLGSVYKA-ELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGY 506
+G G GSV A + G+ +A+KKLS + + ++H N++ L+
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 109
Query: 507 CNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPI 566
YD+ + + +D + ++ ++ + L+ L+ + +
Sbjct: 110 FTPASSLRNFYDF---YLVMPFMQTDLQKIMGMEFSEE-KIQYLVYQMLKGLKYIHSAGV 165
Query: 567 VHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPE--FESGSYS 624
VH + K N+ ++E +++ D GLA + E++ G + APE Y+
Sbjct: 166 VHRDLKPGNLAVNEDCELKILDFGLA----RHADAEMT-GYVVTRWYRAPEVILSWMHYN 220
Query: 625 CQSDVYSLGVVMLELLTGR 643
D++S+G +M E+LTG+
Sbjct: 221 QTVDIWSVGCIMAEMLTGK 239
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 97/242 (40%), Gaps = 31/242 (12%)
Query: 439 TNSFSEGNFIGEGLLGSVYKA-ELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRH 497
++ F + +GEG G V A P G+++A+KK+ E+ + +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREI-KILKHFKH 68
Query: 498 GNIVELIGYCN----EHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAAR 553
NI+ + E+ + + LH ++ + + + I R
Sbjct: 69 ENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFI-----YQTLR 123
Query: 554 ALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGS 613
A++ L ++H + K SN+L++ ++V D GLA ++ S + SE T S
Sbjct: 124 AVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARII-DESAADNSEP--TGQQS 177
Query: 614 GAPEF-------------ESGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRW 660
G EF S YS DV+S G ++ EL R+P R Q L+ +
Sbjct: 178 GMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPIFPGRDYRHQLLLIF 236
Query: 661 AI 662
I
Sbjct: 237 GI 238
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 94/233 (40%), Gaps = 39/233 (16%)
Query: 436 QQYTNSFSEGNFIGEGLLGSVYKAELP-GGKLLAVK--KLSNTVSQRQTDEEFLELASTI 492
+++ F E IG G G V+KA+ GK ++ K +N ++R+ +
Sbjct: 8 KRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAERE--------VKAL 59
Query: 493 SRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFS------------ 540
++L H NIV G + D + +D +S + K
Sbjct: 60 AKLDHVNIVHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKG 119
Query: 541 ----WNIRIR-VALGAARALQYLQEVCE-------PPIVHGNFKSSNILLDEKLIVRVSD 588
W + R L AL+ +++ + ++H + K SNI L + V++ D
Sbjct: 120 TLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGD 179
Query: 589 CGLAPLLFSGSTNELSEGLLTAHGSGAPE-FESGSYSCQSDVYSLGVVMLELL 640
GL L + S+G L +PE S Y + D+Y+LG+++ ELL
Sbjct: 180 FGLVTSLKNDGKRTRSKGTLRYM---SPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 95/211 (45%), Gaps = 50/211 (23%)
Query: 464 GKLLAVKKLSNTVSQRQTDEEFLELASTISRLR--------------HGNIVELIGYCNE 509
GK+ VKK+S + +++ + L+ A+ R R H IV+L
Sbjct: 38 GKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQT 97
Query: 510 HGQHLLVYDY--GGNCTLH---DLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEP 564
G+ L+ D+ GG+ +++ ++E +++ +A A AL +L +
Sbjct: 98 EGKLYLILDFLRGGDLFTRLSKEVMFTEE--------DVKFYLA-ELALALDHLHSLG-- 146
Query: 565 PIVHGNFKSSNILLDEKLIVRVSDCGLAP---------LLFSGSTNELSEGLLTAHGSGA 615
I++ + K NILLDE+ ++++D GL+ F G+ ++ ++ G
Sbjct: 147 -IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRG--- 202
Query: 616 PEFESGSYSCQSDVYSLGVVMLELLTGRKPY 646
++ +D +S GV+M E+LTG P+
Sbjct: 203 -------HTQSADWWSFGVLMFEMLTGTLPF 226
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 99/218 (45%), Gaps = 42/218 (19%)
Query: 448 IGEGLLGSVY---KAELP-GGKLLAVKKLSN-TVSQRQTDEEFLELASTISRLRHGNIVE 502
+G+G G V+ K P G L A+K L T+ R +E ++ + H +V+
Sbjct: 36 LGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKME-RDILADVNHPFVVK 94
Query: 503 LIGYCNEHGQHLLVYDY--GGNCTLH---DLLHSDEEAHKKFSWNIRIRVALGAARALQY 557
L G+ L+ D+ GG+ +++ ++E+ KF +ALG L +
Sbjct: 95 LHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDV--KFYLA---ELALG----LDH 145
Query: 558 LQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAP---------LLFSGSTNELSEGLL 608
L + I++ + K NILLDE+ ++++D GL+ F G+ ++ ++
Sbjct: 146 LHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVV 202
Query: 609 TAHGSGAPEFESGSYSCQSDVYSLGVVMLELLTGRKPY 646
G +S +D +S GV+M E+LTG P+
Sbjct: 203 NRQG----------HSHSADWWSYGVLMFEMLTGSLPF 230
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 99/219 (45%), Gaps = 31/219 (14%)
Query: 444 EGNFIGEGLLGSVY---KAELPGGKLLAVKKLSNT-VSQRQTDEEFLELASTISRLRHGN 499
EG +G G G VY + + K A+K++ T +S E + + L+H N
Sbjct: 25 EGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACRE-----IALLRELKHPN 79
Query: 500 IVELIGYCNEHGQH--LLVYDYGGNCTLHDL-LHSDEEAHKKFSWNIRIRVALGAARALQ 556
++ L H L++DY + H + H +A+KK +++ G ++L
Sbjct: 80 VISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKK-----PVQLPRGMVKSLL 134
Query: 557 Y-----LQEVCEPPIVHGNFKSSNILL----DEKLIVRVSDCGLAPLLFSGSTNELS--E 605
Y + + ++H + K +NIL+ E+ V+++D G A LF+ L+ +
Sbjct: 135 YQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFA-RLFNSPLKPLADLD 193
Query: 606 GLLTAHGSGAPEFESGS--YSCQSDVYSLGVVMLELLTG 642
++ APE G+ Y+ D++++G + ELLT
Sbjct: 194 PVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTS 232
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 95/229 (41%), Gaps = 44/229 (19%)
Query: 436 QQYTNSFSEGNFIGEGLLGSVYKAELP-GGKLLAVK--KLSNTVSQRQTDEEFLELASTI 492
+++ F E IG G G V+KA+ GK +K K +N ++R+ +
Sbjct: 7 KRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAERE--------VKAL 58
Query: 493 SRLRHGNIVELIGYCNEHGQHLLVYDYG------------GNCTLHDLLHSDEEAHKKFS 540
++L H NIV G + +DY C + D+ ++
Sbjct: 59 AKLDHVNIVHYNGCWDG-------FDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQ-- 109
Query: 541 WNIRIR-VALGAARALQYLQEVCE-------PPIVHGNFKSSNILLDEKLIVRVSDCGLA 592
W + R L AL+ +++ + +++ + K SNI L + V++ D GL
Sbjct: 110 WIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLV 169
Query: 593 PLLFSGSTNELSEGLLTAHGSGAPE-FESGSYSCQSDVYSLGVVMLELL 640
L + S+G L +PE S Y + D+Y+LG+++ ELL
Sbjct: 170 TSLKNDGKRXRSKGTLRYM---SPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 99/240 (41%), Gaps = 27/240 (11%)
Query: 439 TNSFSEGNFIGEGLLGSVYKA-ELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRH 497
++ F + +GEG G V A P G+++A+KK+ E+ + +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREI-KILKHFKH 68
Query: 498 GNIVELIGYCN----EHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAAR 553
NI+ + E+ + + LH ++ + + + I R
Sbjct: 69 ENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFI-----YQTLR 123
Query: 554 ALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLF---------SGSTNELS 604
A++ L ++H + K SN+L++ ++V D GLA ++ +G + ++
Sbjct: 124 AVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMT 180
Query: 605 EGLLTAHGSGAPE--FESGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAI 662
E + T APE S YS DV+S G ++ EL R+P R Q L+ + I
Sbjct: 181 EYVAT-RWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPIFPGRDYRHQLLLIFGI 238
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 90/217 (41%), Gaps = 20/217 (9%)
Query: 439 TNSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLR- 496
T+ + IG G G+VYKA P G +A+K + + + + + RL
Sbjct: 3 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEA 62
Query: 497 --HGNIVELIGYC-----NEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVAL 549
H N+V L+ C + + LV+++ L + + +R L
Sbjct: 63 FEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFL 122
Query: 550 GAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLT 609
R L +L C IVH + K NIL+ V+++D GLA + S + ++
Sbjct: 123 ---RGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY---SYQMALDPVVV 173
Query: 610 AHGSGAPE-FESGSYSCQSDVYSLGVVMLELLTGRKP 645
APE +Y+ D++S+G + E+ RKP
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKP 209
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 94/220 (42%), Gaps = 25/220 (11%)
Query: 430 FTIASLQQYTNSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTV-SQRQTDEEFLEL 488
FT+ Q G +G++ + + L G +AVKKLS +Q + EL
Sbjct: 20 FTVLKRYQQLKPIGSG---AQGIVCAAFDTVL--GINVAVKKLSRPFQNQTHAKRAYREL 74
Query: 489 ASTISRLRHGNIVELIGYCN-----EHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNI 543
+ + H NI+ L+ E Q + + + L ++H E H++ S+ +
Sbjct: 75 V-LLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHM-ELDHERMSYLL 132
Query: 544 RIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNEL 603
+ L ++ + I+H + K SNI++ +++ D GLA + TN +
Sbjct: 133 --------YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TACTNFM 181
Query: 604 SEGLLTAHGSGAPEFESG-SYSCQSDVYSLGVVMLELLTG 642
+ APE G Y+ D++S+G +M EL+ G
Sbjct: 182 MTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 93/229 (40%), Gaps = 30/229 (13%)
Query: 432 IASLQQYTNSFSEGNFIGEGLLGSVYKAELPGG-KLLAVKKLSNTVSQRQTDEEFL-ELA 489
I LQ + IG G G V K+ A+K LS +++D F E
Sbjct: 67 IRGLQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEER 126
Query: 490 STISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDE--EAHKKFSWNIRIRV 547
++ +V+L + +V +Y L +L+ + + E KF + + +
Sbjct: 127 DIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKF-YTAEVVL 185
Query: 548 ALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS---------- 597
AL A ++ ++H + K N+LLD+ ++++D G +
Sbjct: 186 ALDAIHSMG---------LIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAV 236
Query: 598 GSTNELSEGLLTAHGSGAPEFESGSYSCQSDVYSLGVVMLELLTGRKPY 646
G+ + +S +L + G G Y + D +S+GV + E+L G P+
Sbjct: 237 GTPDYISPEVLKSQGG------DGYYGRECDWWSVGVFLFEMLVGDTPF 279
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 21/203 (10%)
Query: 448 IGEGLLGSVYKA-ELPGGKLLAVKKLSNTV-SQRQTDEEFLELASTISRLRHGNIVELIG 505
IG G G V A + G +AVKKLS +Q + EL + + H NI+ L+
Sbjct: 30 IGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELV-LLKCVNHKNIISLLN 88
Query: 506 YCN-----EHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQE 560
E Q + + + L ++H E H++ S+ + + L ++
Sbjct: 89 VFTPQKTLEEFQDVYLVMELMDANLCQVIHM-ELDHERMSYLL--------YQMLCGIKH 139
Query: 561 VCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFES 620
+ I+H + K SNI++ +++ D GLA + STN + + APE
Sbjct: 140 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TASTNFMMTPYVVTRYYRAPEVIL 196
Query: 621 G-SYSCQSDVYSLGVVMLELLTG 642
G Y D++S+G +M EL+ G
Sbjct: 197 GMGYKENVDIWSVGCIMGELVKG 219
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 91/218 (41%), Gaps = 33/218 (15%)
Query: 448 IGEGLLGSVYKAE--LPGGKLLAVKKLSNTVSQRQTDEEFLELAST--------ISRLRH 497
IGEG G V+KA GG+ +A+K++ + QT EE + L++ + H
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRV-----RVQTGEEGMPLSTIREVAVLRHLETFEH 73
Query: 498 GNIVELIGYC-----NEHGQHLLVYDYGGNCTLHDL-LHSDEEAHKKFSWNIRIRVALGA 551
N+V L C + + LV+++ DL + D+ +
Sbjct: 74 PNVVRLFDVCTVSRTDRETKLTLVFEHVDQ----DLTTYLDKVPEPGVPTETIKDMMFQL 129
Query: 552 ARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAH 611
R L +L +VH + K NIL+ ++++D GLA + S ++
Sbjct: 130 LRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIY---SFQMALTSVVVTL 183
Query: 612 GSGAPE-FESGSYSCQSDVYSLGVVMLELLTGRKPYDR 648
APE SY+ D++S+G + E+ RKP R
Sbjct: 184 WYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPLFR 220
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 91/218 (41%), Gaps = 33/218 (15%)
Query: 448 IGEGLLGSVYKAE--LPGGKLLAVKKLSNTVSQRQTDEEFLELAST--------ISRLRH 497
IGEG G V+KA GG+ +A+K++ + QT EE + L++ + H
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRV-----RVQTGEEGMPLSTIREVAVLRHLETFEH 73
Query: 498 GNIVELIGYC-----NEHGQHLLVYDYGGNCTLHDL-LHSDEEAHKKFSWNIRIRVALGA 551
N+V L C + + LV+++ DL + D+ +
Sbjct: 74 PNVVRLFDVCTVSRTDRETKLTLVFEHVDQ----DLTTYLDKVPEPGVPTETIKDMMFQL 129
Query: 552 ARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAH 611
R L +L +VH + K NIL+ ++++D GLA + S ++
Sbjct: 130 LRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIY---SFQMALTSVVVTL 183
Query: 612 GSGAPE-FESGSYSCQSDVYSLGVVMLELLTGRKPYDR 648
APE SY+ D++S+G + E+ RKP R
Sbjct: 184 WYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPLFR 220
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 90/238 (37%), Gaps = 45/238 (18%)
Query: 432 IASLQQYTNSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELAST 491
+ +Q + F IG G G V ++ + + K+ N E L+ A T
Sbjct: 66 VKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKW-------EMLKRAET 118
Query: 492 ISRLRHGNI--------VELIGYCNEHGQHL-LVYDYGGNCTLHDLLHSDE----EAHKK 538
++ + + Y + HL LV DY L LL E E +
Sbjct: 119 ACFREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMAR 178
Query: 539 FSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCG-------- 590
F + +A+ + L Y VH + K N+LLD +R++D G
Sbjct: 179 FYIG-EMVLAIDSIHQLHY---------VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDD 228
Query: 591 --LAPLLFSGSTNELSEGLLTAHGSGAPEFESGSYSCQSDVYSLGVVMLELLTGRKPY 646
+ + G+ + +S +L A G G Y + D +SLGV M E+L G P+
Sbjct: 229 GTVQSSVAVGTPDYISPEILQAMEDGM-----GKYGPECDWWSLGVCMYEMLYGETPF 281
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 95/231 (41%), Gaps = 30/231 (12%)
Query: 431 TIASLQQYTNSFSEGNFIGEGLLGSVYKA-ELPGGKLLA---VKKLSNTVSQRQTDEEFL 486
T+ + + + G +G G+ V K E G A +KK S+R E +
Sbjct: 2 TVFRQENVDDYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDI 61
Query: 487 EL-ASTISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRI 545
E S + ++H N++ L +L+ + L D L E ++ + +
Sbjct: 62 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEF-L 120
Query: 546 RVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLI----VRVSDCGLAPLLFSGSTN 601
+ L L LQ I H + K NI+L ++ + +++ D GLA + G N
Sbjct: 121 KQILNGVYYLHSLQ------IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG--N 172
Query: 602 ELSEGLLTAHGSGAPEF---ESGSYS---CQSDVYSLGVVMLELLTGRKPY 646
E G PEF E +Y ++D++S+GV+ LL+G P+
Sbjct: 173 EFKNIF------GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 88/205 (42%), Gaps = 23/205 (11%)
Query: 448 IGEGLLGSVYKA-ELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGY 506
+G G G+V A + G +A+KKL + + +RH N++ L+
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDV 92
Query: 507 ------CNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQE 560
++ LV + G L L+ H+K + R+ + L+ L+
Sbjct: 93 FTPDETLDDFTDFYLVMPFMGT-DLGKLMK-----HEKLGED---RIQFLVYQMLKGLRY 143
Query: 561 VCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPE--F 618
+ I+H + K N+ ++E +++ D GLA + +E+ G + APE
Sbjct: 144 IHAAGIIHRDLKPGNLAVNEDCELKILDFGLA----RQADSEMX-GXVVTRWYRAPEVIL 198
Query: 619 ESGSYSCQSDVYSLGVVMLELLTGR 643
Y+ D++S+G +M E++TG+
Sbjct: 199 NWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 101/249 (40%), Gaps = 34/249 (13%)
Query: 445 GNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELI 504
G F L + E+ K++ L + + + +T+ E L+ LRH +I +L
Sbjct: 21 GGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALK------NLRHQHICQLY 74
Query: 505 GYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEP 564
+ +V +Y L D + S + ++ + + ++ A V
Sbjct: 75 HVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAY-------VHSQ 127
Query: 565 PIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGS---GAPEFESG 621
H + K N+L DE +++ D GL + L T GS APE G
Sbjct: 128 GYAHRDLKPENLLFDEYHKLKLIDFGLC----AKPKGNKDYHLQTCCGSLAYAAPELIQG 183
Query: 622 -SY-SCQSDVYSLGVVMLELLTGRKPYD--------RSRPRGEQSLVRWAIPRLHDIDAL 671
SY ++DV+S+G+++ L+ G P+D + RG+ + +W P I L
Sbjct: 184 KSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYDVPKWLSPS--SILLL 241
Query: 672 SRM--VDPS 678
+M VDP
Sbjct: 242 QQMLQVDPK 250
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 8/96 (8%)
Query: 554 ALQYLQEVCEPPIVHGNFKSSNILLDEK---LIVRVSDCGLAPLLFSGSTNELSEGLLTA 610
A+QYL + I H + K N+L K I++++D G A + S N L+E T
Sbjct: 127 AIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE--TTSHNSLTEPCYTP 181
Query: 611 HGSGAPEFESGSYSCQSDVYSLGVVMLELLTGRKPY 646
+ Y D++SLGV+M LL G P+
Sbjct: 182 YYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 217
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 88/216 (40%), Gaps = 18/216 (8%)
Query: 439 TNSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLR- 496
T+ + IG G G+VYKA P G +A+K + + + + + RL
Sbjct: 3 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEA 62
Query: 497 --HGNIVELIGYC-----NEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVAL 549
H N+V L+ C + + LV+++ L + + +R L
Sbjct: 63 FEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFL 122
Query: 550 GAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLT 609
R L +L C IVH + K NIL+ V+++D GLA + L+ ++T
Sbjct: 123 ---RGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY--SYQMALAPVVVT 174
Query: 610 AHGSGAPEFESGSYSCQSDVYSLGVVMLELLTGRKP 645
+Y+ D++S+G + E+ RKP
Sbjct: 175 LWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKP 209
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 91/218 (41%), Gaps = 33/218 (15%)
Query: 448 IGEGLLGSVYKAE--LPGGKLLAVKKLSNTVSQRQTDEEFLELAST--------ISRLRH 497
IGEG G V+KA GG+ +A+K++ + QT EE + L++ + H
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRV-----RVQTGEEGMPLSTIREVAVLRHLETFEH 73
Query: 498 GNIVELIGYC-----NEHGQHLLVYDYGGNCTLHDL-LHSDEEAHKKFSWNIRIRVALGA 551
N+V L C + + LV+++ DL + D+ +
Sbjct: 74 PNVVRLFDVCTVSRTDRETKLTLVFEHVDQ----DLTTYLDKVPEPGVPTETIKDMMFQL 129
Query: 552 ARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAH 611
R L +L +VH + K NIL+ ++++D GLA + S ++
Sbjct: 130 LRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIY---SFQMALTSVVVTL 183
Query: 612 GSGAPE-FESGSYSCQSDVYSLGVVMLELLTGRKPYDR 648
APE SY+ D++S+G + E+ RKP R
Sbjct: 184 WYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPLFR 220
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 95/211 (45%), Gaps = 50/211 (23%)
Query: 464 GKLLAVKKLSNTVSQRQTDEEFLELASTISRLR--------------HGNIVELIGYCNE 509
GK+ VKK+S + +++ + L+ A+ R R H IV+L
Sbjct: 39 GKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQT 98
Query: 510 HGQHLLVYDY--GGNCTLH---DLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEP 564
G+ L+ D+ GG+ +++ ++E +++ +A A AL +L +
Sbjct: 99 EGKLYLILDFLRGGDLFTRLSKEVMFTEE--------DVKFYLA-ELALALDHLHSLG-- 147
Query: 565 PIVHGNFKSSNILLDEKLIVRVSDCGLAP---------LLFSGSTNELSEGLLTAHGSGA 615
I++ + K NILLDE+ ++++D GL+ F G+ ++ ++ G
Sbjct: 148 -IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRG--- 203
Query: 616 PEFESGSYSCQSDVYSLGVVMLELLTGRKPY 646
++ +D +S GV+M E+LTG P+
Sbjct: 204 -------HTQSADWWSFGVLMFEMLTGTLPF 227
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 95/211 (45%), Gaps = 50/211 (23%)
Query: 464 GKLLAVKKLSNTVSQRQTDEEFLELASTISRLR--------------HGNIVELIGYCNE 509
GK+ VKK+S + +++ + L+ A+ R R H IV+L
Sbjct: 38 GKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQT 97
Query: 510 HGQHLLVYDY--GGNCTLH---DLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEP 564
G+ L+ D+ GG+ +++ ++E +++ +A A AL +L +
Sbjct: 98 EGKLYLILDFLRGGDLFTRLSKEVMFTEE--------DVKFYLA-ELALALDHLHSLG-- 146
Query: 565 PIVHGNFKSSNILLDEKLIVRVSDCGLAP---------LLFSGSTNELSEGLLTAHGSGA 615
I++ + K NILLDE+ ++++D GL+ F G+ ++ ++ G
Sbjct: 147 -IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRG--- 202
Query: 616 PEFESGSYSCQSDVYSLGVVMLELLTGRKPY 646
++ +D +S GV+M E+LTG P+
Sbjct: 203 -------HTQSADWWSFGVLMFEMLTGTLPF 226
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 90/238 (37%), Gaps = 45/238 (18%)
Query: 432 IASLQQYTNSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELAST 491
+ +Q + F IG G G V ++ + + K+ N E L+ A T
Sbjct: 82 VKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKW-------EMLKRAET 134
Query: 492 ISRLRHGNI--------VELIGYCNEHGQHL-LVYDYGGNCTLHDLLHSDE----EAHKK 538
++ + + Y + HL LV DY L LL E E +
Sbjct: 135 ACFREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMAR 194
Query: 539 FSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCG-------- 590
F + +A+ + L Y VH + K N+LLD +R++D G
Sbjct: 195 FYIG-EMVLAIDSIHQLHY---------VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDD 244
Query: 591 --LAPLLFSGSTNELSEGLLTAHGSGAPEFESGSYSCQSDVYSLGVVMLELLTGRKPY 646
+ + G+ + +S +L A G G Y + D +SLGV M E+L G P+
Sbjct: 245 GTVQSSVAVGTPDYISPEILQAMEDGM-----GKYGPECDWWSLGVCMYEMLYGETPF 297
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 87/204 (42%), Gaps = 23/204 (11%)
Query: 448 IGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEE-----FLELASTISRLRHGNIV 501
+GEG +VYK + L+A+K++ R EE + S + L+H NIV
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEI------RLEHEEGAPCTAIREVSLLKDLKHANIV 63
Query: 502 ELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNI--RIRVALGAARALQYLQ 559
L + LV++Y L D + + NI V L + L+ L
Sbjct: 64 TLHDIIHTEKSLTLVFEY---------LDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLA 114
Query: 560 EVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE 619
++H + K N+L++E+ ++++D GLA + +E + +
Sbjct: 115 YCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLG 174
Query: 620 SGSYSCQSDVYSLGVVMLELLTGR 643
S YS Q D++ +G + E+ TGR
Sbjct: 175 STDYSTQIDMWGVGCIFYEMATGR 198
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 90/222 (40%), Gaps = 34/222 (15%)
Query: 446 NFIGEGLLGSVYKA-ELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELI 504
+ +G+G +V++ G L A+K +N R D + E + +L H NIV+L
Sbjct: 15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREF-EVLKKLNHKNIVKLF 73
Query: 505 GYCNEHG--QHLLVYDYGGNCTLHDLLHSDEEAH--KKFSWNIRIRVALGAARALQYLQE 560
E +L+ ++ +L+ +L A+ + + I +R +G L+
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---- 129
Query: 561 VCEPPIVHGNFKSSNILL----DEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGA- 615
E IVH N K NI+ D + + +++D G A L E E + +G+
Sbjct: 130 --ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL------EDDEQFVXLYGTEEY 181
Query: 616 --PEF---------ESGSYSCQSDVYSLGVVMLELLTGRKPY 646
P+ Y D++S+GV TG P+
Sbjct: 182 LHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 103/219 (47%), Gaps = 23/219 (10%)
Query: 431 TIASLQQYTNSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTV-SQRQTDEEFLELA 489
T L++Y N G+ +G++ + Y A L +A+KKLS +Q + EL
Sbjct: 19 TFTVLKRYQNLKPIGSG-AQGIVVAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELV 75
Query: 490 STISRLRHGNIVELIGYCN-----EHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIR 544
+ + H NI+ L+ E Q + + + L ++ E H++ S+ +
Sbjct: 76 -LMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQM-ELDHERMSY-LL 132
Query: 545 IRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELS 604
++ +G ++ + I+H + K SNI++ +++ D GLA +G++ ++
Sbjct: 133 YQMLVG-------IKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLART--AGTSFMMT 183
Query: 605 EGLLTAHGSGAPEFESG-SYSCQSDVYSLGVVMLELLTG 642
++T + APE G Y D++S+GV+M E++ G
Sbjct: 184 PYVVTRYYR-APEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 91/222 (40%), Gaps = 34/222 (15%)
Query: 446 NFIGEGLLGSVYKA-ELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELI 504
+ +G+G +V++ G L A+K +N R D + E + +L H NIV+L
Sbjct: 15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREF-EVLKKLNHKNIVKLF 73
Query: 505 GYCNEHG--QHLLVYDYGGNCTLHDLLHSDEEAH--KKFSWNIRIRVALGAARALQYLQE 560
E +L+ ++ +L+ +L A+ + + I +R +G L+
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---- 129
Query: 561 VCEPPIVHGNFKSSNILL----DEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGA- 615
E IVH N K NI+ D + + +++D G A L E E ++ +G+
Sbjct: 130 --ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL------EDDEQFVSLYGTEEY 181
Query: 616 --PEF---------ESGSYSCQSDVYSLGVVMLELLTGRKPY 646
P+ Y D++S+GV TG P+
Sbjct: 182 LHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 96/229 (41%), Gaps = 30/229 (13%)
Query: 432 IASLQQYTNSFSEGNFIGEGLLGSVYKAELPGG-KLLAVKKLSNTVSQRQTDEEFLELAS 490
I L+ + IG G G V K+ A+K LS +++D F
Sbjct: 61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEER 120
Query: 491 TISRLRHGNIVELIGYCNEHGQHL-LVYDYGGNCTLHDLLHSDEEAHKKFS--WNIRIRV 547
I + V + Y + ++L +V +Y L +L+ S+ + +K++ + + +
Sbjct: 121 DIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM-SNYDVPEKWARFYTAEVVL 179
Query: 548 ALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS---------- 597
AL A ++ + +H + K N+LLD+ ++++D G +
Sbjct: 180 ALDAIHSMGF---------IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV 230
Query: 598 GSTNELSEGLLTAHGSGAPEFESGSYSCQSDVYSLGVVMLELLTGRKPY 646
G+ + +S +L + G G Y + D +S+GV + E+L G P+
Sbjct: 231 GTPDYISPEVLKSQGG------DGYYGRECDWWSVGVFLYEMLVGDTPF 273
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 96/229 (41%), Gaps = 30/229 (13%)
Query: 432 IASLQQYTNSFSEGNFIGEGLLGSVYKAELPGG-KLLAVKKLSNTVSQRQTDEEFLELAS 490
I L+ + IG G G V K+ A+K LS +++D F
Sbjct: 66 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEER 125
Query: 491 TISRLRHGNIVELIGYCNEHGQHL-LVYDYGGNCTLHDLLHSDEEAHKKFS--WNIRIRV 547
I + V + Y + ++L +V +Y L +L+ S+ + +K++ + + +
Sbjct: 126 DIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM-SNYDVPEKWARFYTAEVVL 184
Query: 548 ALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS---------- 597
AL A ++ + +H + K N+LLD+ ++++D G +
Sbjct: 185 ALDAIHSMGF---------IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV 235
Query: 598 GSTNELSEGLLTAHGSGAPEFESGSYSCQSDVYSLGVVMLELLTGRKPY 646
G+ + +S +L + G G Y + D +S+GV + E+L G P+
Sbjct: 236 GTPDYISPEVLKSQGG------DGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 93/227 (40%), Gaps = 34/227 (14%)
Query: 437 QYTNSFSEGNFIGEGLLGSVYKA-ELPGGKLLAVKKLSNT-------VSQRQTDEEFLEL 488
+Y+ +S + +G G G V+ A + K + VK + + + + LE+
Sbjct: 21 EYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEI 80
Query: 489 ASTISRLRHGNIVELIGYCNEHGQHLLVYD-YGGNCTLHDLLHSDEEAHKKFSWNIRIRV 547
A +SR+ H NI++++ G LV + +G L + + H + + +
Sbjct: 81 A-ILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFI----DRHPRLDEPLASYI 135
Query: 548 ALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLL--------FSGS 599
A+ YL+ I+H + K NI++ E +++ D G A L F G+
Sbjct: 136 FRQLVSAVGYLRL---KDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTFCGT 192
Query: 600 TNELSEGLLTAHGSGAPEFESGSYSCQSDVYSLGVVMLELLTGRKPY 646
+ +L + PE E ++SLGV + L+ P+
Sbjct: 193 IEYCAPEVLMGNPYRGPELE---------MWSLGVTLYTLVFEENPF 230
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 103/219 (47%), Gaps = 23/219 (10%)
Query: 431 TIASLQQYTNSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTV-SQRQTDEEFLELA 489
T L++Y N G+ +G++ + Y A L +A+KKLS +Q + EL
Sbjct: 19 TFTVLKRYQNLKPIGSG-AQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELV 75
Query: 490 STISRLRHGNIVELIGYCN-----EHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIR 544
+ + H NI+ L+ E Q + + + L ++ E H++ S+ +
Sbjct: 76 -LMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQM-ELDHERMSY-LL 132
Query: 545 IRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELS 604
++ +G ++ + I+H + K SNI++ +++ D GLA +G++ ++
Sbjct: 133 YQMLVG-------IKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLART--AGTSFMMT 183
Query: 605 EGLLTAHGSGAPEFESG-SYSCQSDVYSLGVVMLELLTG 642
++T + APE G Y D++S+GV+M E++ G
Sbjct: 184 PYVVTRYYR-APEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 96/229 (41%), Gaps = 30/229 (13%)
Query: 432 IASLQQYTNSFSEGNFIGEGLLGSVYKAELPGG-KLLAVKKLSNTVSQRQTDEEFLELAS 490
I L+ + IG G G V K+ A+K LS +++D F
Sbjct: 66 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEER 125
Query: 491 TISRLRHGNIVELIGYCNEHGQHL-LVYDYGGNCTLHDLLHSDEEAHKKFS--WNIRIRV 547
I + V + Y + ++L +V +Y L +L+ S+ + +K++ + + +
Sbjct: 126 DIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM-SNYDVPEKWARFYTAEVVL 184
Query: 548 ALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS---------- 597
AL A ++ + +H + K N+LLD+ ++++D G +
Sbjct: 185 ALDAIHSMGF---------IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV 235
Query: 598 GSTNELSEGLLTAHGSGAPEFESGSYSCQSDVYSLGVVMLELLTGRKPY 646
G+ + +S +L + G G Y + D +S+GV + E+L G P+
Sbjct: 236 GTPDYISPEVLKSQGG------DGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 21/108 (19%)
Query: 554 ALQYLQEVCEPPIVHGNFKSSNILL---DEKLIVRVSDCGLAPLL--------FSGSTNE 602
A+QYL E I+H + K N+LL +E +++++D G + +L G+
Sbjct: 251 AVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTY 307
Query: 603 LSEGLLTAHGSGAPEFESGSYSCQSDVYSLGVVMLELLTGRKPYDRSR 650
L+ +L + G+ Y+ D +SLGV++ L+G P+ R
Sbjct: 308 LAPEVLVSVGTAG-------YNRAVDCWSLGVILFICLSGYPPFSEHR 348
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 53/110 (48%), Gaps = 21/110 (19%)
Query: 554 ALQYLQEVCEPPIVHGNFKSSNILL---DEKLIVRVSDCGLAPLL--------FSGSTNE 602
A+QYL E I+H + K N+LL +E +++++D G + +L G+
Sbjct: 265 AVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTY 321
Query: 603 LSEGLLTAHGSGAPEFESGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPR 652
L+ +L + G+ Y+ D +SLGV++ L+G P+ R +
Sbjct: 322 LAPEVLVSVGTAG-------YNRAVDCWSLGVILFICLSGYPPFSEHRTQ 364
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 48/104 (46%), Gaps = 5/104 (4%)
Query: 545 IRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELS 604
I + AR +++L +H + + NILL E +V++ D GLA ++
Sbjct: 202 ISYSFQVARGMEFLSSR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRK 258
Query: 605 EGLLTAHGSGAPE-FESGSYSCQSDVYSLGVVMLELLT-GRKPY 646
APE YS +SDV+S GV++ E+ + G PY
Sbjct: 259 GDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPY 302
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 6/78 (7%)
Query: 445 GNFIGEGLLGSVYKA------ELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHG 498
G +G G G V +A + P + +AVK L + + EL H
Sbjct: 32 GKSLGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKEGATASEYKALMTELKILTHIGHHL 91
Query: 499 NIVELIGYCNEHGQHLLV 516
N+V L+G C + G L+V
Sbjct: 92 NVVNLLGACTKQGGPLMV 109
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 99/217 (45%), Gaps = 22/217 (10%)
Query: 436 QQYTNSFSEGNFIGEGLLGSVYKA-ELPGGKLLAVKKLSNT---VSQRQTDEEFLELAST 491
+++ + + + IG+G G V KA + + +A+K + N ++Q Q + LEL +
Sbjct: 50 EKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNK 109
Query: 492 ISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGA 551
IV L + LV++ + L+DLL + + S N+ + A
Sbjct: 110 HDTEMKYYIVHLKRHFMFRNHLCLVFEML-SYNLYDLLRNTN--FRGVSLNLTRKFAQQM 166
Query: 552 ARALQYLQEVCEPPIVHGNFKSSNILL--DEKLIVRVSDCGLAPLLFSGSTNELSEGL-- 607
AL +L E I+H + K NILL ++ +++ D G S+ +L + +
Sbjct: 167 CTALLFL-ATPELSIIHCDLKPENILLCNPKRXAIKIVDFG--------SSCQLGQRIYQ 217
Query: 608 -LTAHGSGAPEFESGS-YSCQSDVYSLGVVMLELLTG 642
+ + +PE G Y D++SLG +++E+ TG
Sbjct: 218 XIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTG 254
>pdb|2LAV|A Chain A, Nmr Solution Structure Of Human Vaccinia-Related Kinase 1
Length = 361
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 61/130 (46%), Gaps = 13/130 (10%)
Query: 527 DLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEK--LIV 584
DL E K+FS ++++L R L L+ + E VHG+ K+SN+LL+ K V
Sbjct: 137 DLQKIYEANAKRFSRKTVLQLSL---RILDILEYIHEHEYVHGDIKASNLLLNYKNPDQV 193
Query: 585 RVSDCGLAPLLF-SGSTNELSEGLLTAHGSGAPEFES------GSYSCQSDVYSLGVVML 637
+ D GLA G E E H G EF S + S + D+ LG M+
Sbjct: 194 YLVDYGLAYRYCPEGVHKEYKEDPKRCH-DGTIEFTSIDAHNGVAPSRRGDLEILGYCMI 252
Query: 638 ELLTGRKPYD 647
+ LTG P++
Sbjct: 253 QWLTGHLPWE 262
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 93/213 (43%), Gaps = 30/213 (14%)
Query: 448 IGEGLLGSVYKA-ELPG---GKLLAVKKLSNTVSQRQTDEEFLELA--STISRLRHGNIV 501
+G+G G V++ ++ G GK+ A+K L + R + A + + ++H IV
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 502 ELIGYCNEHGQHLLVYDY--GGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQ 559
+LI G+ L+ +Y GG L E F + + AL +L
Sbjct: 85 DLIYAFQTGGKLYLILEYLSGGE------LFMQLEREGIFMEDTACFYLAEISMALGHLH 138
Query: 560 EVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE 619
+ I++ + K NI+L+ + V+++D GL + +G +T G E+
Sbjct: 139 Q---KGIIYRDLKPENIMLNHQGHVKLTDFGLC-------KESIHDGTVTHXFCGTIEYM 188
Query: 620 SGSYSCQS------DVYSLGVVMLELLTGRKPY 646
+ +S D +SLG +M ++LTG P+
Sbjct: 189 APEILMRSGHNRAVDWWSLGALMYDMLTGAPPF 221
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 89/217 (41%), Gaps = 20/217 (9%)
Query: 439 TNSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLR- 496
T+ + IG G G+VYKA P G +A+K + + + + + RL
Sbjct: 3 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEA 62
Query: 497 --HGNIVELIGYC-----NEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVAL 549
H N+V L+ C + + LV+++ L + + +R L
Sbjct: 63 FEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFL 122
Query: 550 GAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLT 609
R L +L C IVH + K NIL+ V+++D GLA + S ++
Sbjct: 123 ---RGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY---SYQMALFPVVV 173
Query: 610 AHGSGAPE-FESGSYSCQSDVYSLGVVMLELLTGRKP 645
APE +Y+ D++S+G + E+ RKP
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKP 209
>pdb|2KTY|A Chain A, Solution Structure Of Human Vaccinia Related Kinase-1
pdb|2KUL|A Chain A, Solution Structure Of Human Vaccinia Related Kinase
1(Vrk1)
Length = 368
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 61/130 (46%), Gaps = 13/130 (10%)
Query: 527 DLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEK--LIV 584
DL E K+FS ++++L R L L+ + E VHG+ K+SN+LL+ K V
Sbjct: 137 DLQKIYEANAKRFSRKTVLQLSL---RILDILEYIHEHEYVHGDIKASNLLLNYKNPDQV 193
Query: 585 RVSDCGLAPLLF-SGSTNELSEGLLTAHGSGAPEFES------GSYSCQSDVYSLGVVML 637
+ D GLA G E E H G EF S + S + D+ LG M+
Sbjct: 194 YLVDYGLAYRYCPEGVHKEYKEDPKRCH-DGTIEFTSIDAHNGVAPSRRGDLEILGYCMI 252
Query: 638 ELLTGRKPYD 647
+ LTG P++
Sbjct: 253 QWLTGHLPWE 262
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 87/219 (39%), Gaps = 21/219 (9%)
Query: 439 TNSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLR- 496
T+ + IG G G+VYKA P G +A+K + + ++ LR
Sbjct: 8 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRR 67
Query: 497 -----HGNIVELIGYC-----NEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIR 546
H N+V L+ C + + LV+++ L + + +R
Sbjct: 68 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMR 127
Query: 547 VALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEG 606
L R L +L C IVH + K NIL+ V+++D GLA + L+
Sbjct: 128 QFL---RGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY--SYQMALTPV 179
Query: 607 LLTAHGSGAPEFESGSYSCQSDVYSLGVVMLELLTGRKP 645
++T +Y+ D++S+G + E+ RKP
Sbjct: 180 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKP 217
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 41/97 (42%)
Query: 568 HGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFESGSYSCQS 627
H + K NIL+ + D G+A +L + T + F + ++
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYXAPERFSESHATYRA 216
Query: 628 DVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPR 664
D+Y+L V+ E LTG PY + + + AIPR
Sbjct: 217 DIYALTCVLYECLTGSPPYQGDQLSVXGAHINQAIPR 253
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 94/231 (40%), Gaps = 30/231 (12%)
Query: 431 TIASLQQYTNSFSEGNFIGEGLLGSVYKA-ELPGGKLLA---VKKLSNTVSQRQTDEEFL 486
T+ + + + G +G G V K E G A +KK S+R E +
Sbjct: 2 TVFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDI 61
Query: 487 EL-ASTISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRI 545
E S + ++H N++ L +L+ + L D L E ++ + +
Sbjct: 62 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEF-L 120
Query: 546 RVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLI----VRVSDCGLAPLLFSGSTN 601
+ L L LQ I H + K NI+L ++ + +++ D GLA + G N
Sbjct: 121 KQILNGVYYLHSLQ------IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG--N 172
Query: 602 ELSEGLLTAHGSGAPEF---ESGSYS---CQSDVYSLGVVMLELLTGRKPY 646
E G PEF E +Y ++D++S+GV+ LL+G P+
Sbjct: 173 EFKNIF------GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 94/231 (40%), Gaps = 30/231 (12%)
Query: 431 TIASLQQYTNSFSEGNFIGEGLLGSVYKA-ELPGGKLLA---VKKLSNTVSQRQTDEEFL 486
T+ + + + G +G G V K E G A +KK S+R E +
Sbjct: 2 TVFRQENVDDYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDI 61
Query: 487 EL-ASTISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRI 545
E S + ++H N++ L +L+ + L D L E ++ + +
Sbjct: 62 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEF-L 120
Query: 546 RVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLI----VRVSDCGLAPLLFSGSTN 601
+ L L LQ I H + K NI+L ++ + +++ D GLA + G N
Sbjct: 121 KQILNGVYYLHSLQ------IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG--N 172
Query: 602 ELSEGLLTAHGSGAPEF---ESGSYS---CQSDVYSLGVVMLELLTGRKPY 646
E G PEF E +Y ++D++S+GV+ LL+G P+
Sbjct: 173 EFKNIF------GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 94/231 (40%), Gaps = 30/231 (12%)
Query: 431 TIASLQQYTNSFSEGNFIGEGLLGSVYKA-ELPGGKLLA---VKKLSNTVSQRQTDEEFL 486
T+ + + + G +G G V K E G A +KK S+R E +
Sbjct: 2 TVFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDI 61
Query: 487 EL-ASTISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRI 545
E S + ++H N++ L +L+ + L D L E ++ + +
Sbjct: 62 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEF-L 120
Query: 546 RVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLI----VRVSDCGLAPLLFSGSTN 601
+ L L LQ I H + K NI+L ++ + +++ D GLA + G N
Sbjct: 121 KQILNGVYYLHSLQ------IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG--N 172
Query: 602 ELSEGLLTAHGSGAPEF---ESGSYS---CQSDVYSLGVVMLELLTGRKPY 646
E G PEF E +Y ++D++S+GV+ LL+G P+
Sbjct: 173 EFKNIF------GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 94/231 (40%), Gaps = 30/231 (12%)
Query: 431 TIASLQQYTNSFSEGNFIGEGLLGSVYKA-ELPGGKLLA---VKKLSNTVSQRQTDEEFL 486
T+ + + + G +G G V K E G A +KK S+R E +
Sbjct: 2 TVFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDI 61
Query: 487 EL-ASTISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRI 545
E S + ++H N++ L +L+ + L D L E ++ + +
Sbjct: 62 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEF-L 120
Query: 546 RVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLI----VRVSDCGLAPLLFSGSTN 601
+ L L LQ I H + K NI+L ++ + +++ D GLA + G N
Sbjct: 121 KQILNGVYYLHSLQ------IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG--N 172
Query: 602 ELSEGLLTAHGSGAPEF---ESGSYS---CQSDVYSLGVVMLELLTGRKPY 646
E G PEF E +Y ++D++S+GV+ LL+G P+
Sbjct: 173 EFKNIF------GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 94/231 (40%), Gaps = 30/231 (12%)
Query: 431 TIASLQQYTNSFSEGNFIGEGLLGSVYKA-ELPGGKLLA---VKKLSNTVSQRQTDEEFL 486
T+ + + + G +G G V K E G A +KK S+R E +
Sbjct: 1 TVFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDI 60
Query: 487 EL-ASTISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRI 545
E S + ++H N++ L +L+ + L D L E ++ + +
Sbjct: 61 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEF-L 119
Query: 546 RVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLI----VRVSDCGLAPLLFSGSTN 601
+ L L LQ I H + K NI+L ++ + +++ D GLA + G N
Sbjct: 120 KQILNGVYYLHSLQ------IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG--N 171
Query: 602 ELSEGLLTAHGSGAPEF---ESGSYS---CQSDVYSLGVVMLELLTGRKPY 646
E G PEF E +Y ++D++S+GV+ LL+G P+
Sbjct: 172 EFKNIF------GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 216
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 93/213 (43%), Gaps = 30/213 (14%)
Query: 448 IGEGLLGSVYKA-ELPG---GKLLAVKKLSNTVSQRQTDEEFLELA--STISRLRHGNIV 501
+G+G G V++ ++ G GK+ A+K L + R + A + + ++H IV
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 502 ELIGYCNEHGQHLLVYDY--GGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQ 559
+LI G+ L+ +Y GG L E F + + AL +L
Sbjct: 85 DLIYAFQTGGKLYLILEYLSGGE------LFMQLEREGIFMEDTACFYLAEISMALGHLH 138
Query: 560 EVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE 619
+ I++ + K NI+L+ + V+++D GL + +G +T G E+
Sbjct: 139 Q---KGIIYRDLKPENIMLNHQGHVKLTDFGLC-------KESIHDGTVTHTFCGTIEYM 188
Query: 620 SGSYSCQS------DVYSLGVVMLELLTGRKPY 646
+ +S D +SLG +M ++LTG P+
Sbjct: 189 APEILMRSGHNRAVDWWSLGALMYDMLTGAPPF 221
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 94/231 (40%), Gaps = 30/231 (12%)
Query: 431 TIASLQQYTNSFSEGNFIGEGLLGSVYKA-ELPGGKLLA---VKKLSNTVSQRQTDEEFL 486
T+ + + + G +G G V K E G A +KK S+R E +
Sbjct: 1 TVFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDI 60
Query: 487 EL-ASTISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRI 545
E S + ++H N++ L +L+ + L D L E ++ + +
Sbjct: 61 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEF-L 119
Query: 546 RVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLI----VRVSDCGLAPLLFSGSTN 601
+ L L LQ I H + K NI+L ++ + +++ D GLA + G N
Sbjct: 120 KQILNGVYYLHSLQ------IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG--N 171
Query: 602 ELSEGLLTAHGSGAPEF---ESGSYS---CQSDVYSLGVVMLELLTGRKPY 646
E G PEF E +Y ++D++S+GV+ LL+G P+
Sbjct: 172 EFKNIF------GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 216
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 21/108 (19%)
Query: 554 ALQYLQEVCEPPIVHGNFKSSNILL---DEKLIVRVSDCGLAPLL--------FSGSTNE 602
A+QYL E I+H + K N+LL +E +++++D G + +L G+
Sbjct: 132 AVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTY 188
Query: 603 LSEGLLTAHGSGAPEFESGSYSCQSDVYSLGVVMLELLTGRKPYDRSR 650
L+ +L + G+ Y+ D +SLGV++ L+G P+ R
Sbjct: 189 LAPEVLVSVGTAG-------YNRAVDCWSLGVILFICLSGYPPFSEHR 229
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 86/203 (42%), Gaps = 16/203 (7%)
Query: 448 IGEGLLGSVYKAE-LPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGY 506
IGEG G+V+KA+ +++A+K++ L + L+H NIV L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 507 CNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKF-SWNIRIRVALGAARALQYLQEV--CE 563
+ + LV+++ D++ K F S N + + + Q L+ + C
Sbjct: 70 LHSDKKLTLVFEF-----------CDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH 118
Query: 564 PP-IVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFESGS 622
++H + K N+L++ ++++D GLA +E + + F +
Sbjct: 119 SRNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKL 178
Query: 623 YSCQSDVYSLGVVMLELLTGRKP 645
YS D++S G + EL +P
Sbjct: 179 YSTSIDMWSAGCIFAELANAARP 201
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 94/231 (40%), Gaps = 30/231 (12%)
Query: 431 TIASLQQYTNSFSEGNFIGEGLLGSVYKA-ELPGGKLLA---VKKLSNTVSQRQTDEEFL 486
T+ + + + G +G G V K E G A +KK S+R E +
Sbjct: 2 TVFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDI 61
Query: 487 EL-ASTISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRI 545
E S + ++H N++ L +L+ + L D L E ++ + +
Sbjct: 62 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEF-L 120
Query: 546 RVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLI----VRVSDCGLAPLLFSGSTN 601
+ L L LQ I H + K NI+L ++ + +++ D GLA + G N
Sbjct: 121 KQILNGVYYLHSLQ------IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG--N 172
Query: 602 ELSEGLLTAHGSGAPEF---ESGSYS---CQSDVYSLGVVMLELLTGRKPY 646
E G PEF E +Y ++D++S+GV+ LL+G P+
Sbjct: 173 EFKNIF------GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 94/231 (40%), Gaps = 30/231 (12%)
Query: 431 TIASLQQYTNSFSEGNFIGEGLLGSVYKA-ELPGGKLLA---VKKLSNTVSQRQTDEEFL 486
T+ + + + G +G G V K E G A +KK S+R E +
Sbjct: 2 TVFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDI 61
Query: 487 EL-ASTISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRI 545
E S + ++H N++ L +L+ + L D L E ++ + +
Sbjct: 62 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEF-L 120
Query: 546 RVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLI----VRVSDCGLAPLLFSGSTN 601
+ L L LQ I H + K NI+L ++ + +++ D GLA + G N
Sbjct: 121 KQILNGVYYLHSLQ------IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG--N 172
Query: 602 ELSEGLLTAHGSGAPEF---ESGSYS---CQSDVYSLGVVMLELLTGRKPY 646
E G PEF E +Y ++D++S+GV+ LL+G P+
Sbjct: 173 EFKNIF------GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 21/108 (19%)
Query: 554 ALQYLQEVCEPPIVHGNFKSSNILL---DEKLIVRVSDCGLAPLL--------FSGSTNE 602
A+QYL E I+H + K N+LL +E +++++D G + +L G+
Sbjct: 126 AVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTY 182
Query: 603 LSEGLLTAHGSGAPEFESGSYSCQSDVYSLGVVMLELLTGRKPYDRSR 650
L+ +L + G+ Y+ D +SLGV++ L+G P+ R
Sbjct: 183 LAPEVLVSVGTAG-------YNRAVDCWSLGVILFICLSGYPPFSEHR 223
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 94/231 (40%), Gaps = 30/231 (12%)
Query: 431 TIASLQQYTNSFSEGNFIGEGLLGSVYKA-ELPGGKLLA---VKKLSNTVSQRQTDEEFL 486
T+ + + + G +G G V K E G A +KK S+R E +
Sbjct: 2 TVFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDI 61
Query: 487 EL-ASTISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRI 545
E S + ++H N++ L +L+ + L D L E ++ + +
Sbjct: 62 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEF-L 120
Query: 546 RVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLI----VRVSDCGLAPLLFSGSTN 601
+ L L LQ I H + K NI+L ++ + +++ D GLA + G N
Sbjct: 121 KQILNGVYYLHSLQ------IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG--N 172
Query: 602 ELSEGLLTAHGSGAPEF---ESGSYS---CQSDVYSLGVVMLELLTGRKPY 646
E G PEF E +Y ++D++S+GV+ LL+G P+
Sbjct: 173 EFKNIF------GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 21/108 (19%)
Query: 554 ALQYLQEVCEPPIVHGNFKSSNILL---DEKLIVRVSDCGLAPLL--------FSGSTNE 602
A+QYL E I+H + K N+LL +E +++++D G + +L G+
Sbjct: 126 AVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTY 182
Query: 603 LSEGLLTAHGSGAPEFESGSYSCQSDVYSLGVVMLELLTGRKPYDRSR 650
L+ +L + G+ Y+ D +SLGV++ L+G P+ R
Sbjct: 183 LAPEVLVSVGTAG-------YNRAVDCWSLGVILFICLSGYPPFSEHR 223
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 21/108 (19%)
Query: 554 ALQYLQEVCEPPIVHGNFKSSNILL---DEKLIVRVSDCGLAPLL--------FSGSTNE 602
A+QYL E I+H + K N+LL +E +++++D G + +L G+
Sbjct: 126 AVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTY 182
Query: 603 LSEGLLTAHGSGAPEFESGSYSCQSDVYSLGVVMLELLTGRKPYDRSR 650
L+ +L + G+ Y+ D +SLGV++ L+G P+ R
Sbjct: 183 LAPEVLVSVGTAG-------YNRAVDCWSLGVILFICLSGYPPFSEHR 223
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 21/108 (19%)
Query: 554 ALQYLQEVCEPPIVHGNFKSSNILL---DEKLIVRVSDCGLAPLL--------FSGSTNE 602
A+QYL E I+H + K N+LL +E +++++D G + +L G+
Sbjct: 125 AVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTY 181
Query: 603 LSEGLLTAHGSGAPEFESGSYSCQSDVYSLGVVMLELLTGRKPYDRSR 650
L+ +L + G+ Y+ D +SLGV++ L+G P+ R
Sbjct: 182 LAPEVLVSVGTAG-------YNRAVDCWSLGVILFICLSGYPPFSEHR 222
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 94/231 (40%), Gaps = 30/231 (12%)
Query: 431 TIASLQQYTNSFSEGNFIGEGLLGSVYKA-ELPGGKLLA---VKKLSNTVSQRQTDEEFL 486
T+ + + + G +G G V K E G A +KK S+R E +
Sbjct: 2 TVFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDI 61
Query: 487 EL-ASTISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRI 545
E S + ++H N++ L +L+ + L D L E ++ + +
Sbjct: 62 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEF-L 120
Query: 546 RVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLI----VRVSDCGLAPLLFSGSTN 601
+ L L LQ I H + K NI+L ++ + +++ D GLA + G N
Sbjct: 121 KQILNGVYYLHSLQ------IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG--N 172
Query: 602 ELSEGLLTAHGSGAPEF---ESGSYS---CQSDVYSLGVVMLELLTGRKPY 646
E G PEF E +Y ++D++S+GV+ LL+G P+
Sbjct: 173 EFKNIF------GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 40/85 (47%), Gaps = 5/85 (5%)
Query: 566 IVHGNFKSSNIL-LDEK---LIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFESG 621
+VH + K SNIL +DE +R+ D G A L L TA+ E
Sbjct: 137 VVHRDLKPSNILYVDESGNPESIRICDFGFAKQL-RAENGLLMTPCYTANFVAPEVLERQ 195
Query: 622 SYSCQSDVYSLGVVMLELLTGRKPY 646
Y D++SLGV++ +LTG P+
Sbjct: 196 GYDAACDIWSLGVLLYTMLTGYTPF 220
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 94/231 (40%), Gaps = 30/231 (12%)
Query: 431 TIASLQQYTNSFSEGNFIGEGLLGSVYKA-ELPGGKLLA---VKKLSNTVSQRQTDEEFL 486
T+ + + + G +G G V K E G A +KK S+R E +
Sbjct: 2 TVFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDI 61
Query: 487 EL-ASTISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRI 545
E S + ++H N++ L +L+ + L D L E ++ + +
Sbjct: 62 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEF-L 120
Query: 546 RVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLI----VRVSDCGLAPLLFSGSTN 601
+ L L LQ I H + K NI+L ++ + +++ D GLA + G N
Sbjct: 121 KQILNGVYYLHSLQ------IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG--N 172
Query: 602 ELSEGLLTAHGSGAPEF---ESGSYS---CQSDVYSLGVVMLELLTGRKPY 646
E G PEF E +Y ++D++S+GV+ LL+G P+
Sbjct: 173 EFKNIF------GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 89/212 (41%), Gaps = 29/212 (13%)
Query: 448 IGEGLLGSVYKAELPG-GKLLAVKKLSNTVSQRQTDEEFLELASTISRL--RHGNIVELI 504
+G+G G V +E G +L AVK L V + D E + + L + + +L
Sbjct: 349 LGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLH 408
Query: 505 GYCNEHGQHLLVYDY--GGNCTLH-DLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEV 561
+ V +Y GG+ H + +E H F A A L +LQ
Sbjct: 409 SCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVF-------YAAEIAIGLFFLQS- 460
Query: 562 CEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFESG 621
I++ + K N++LD + ++++D G+ + +G+ T G P++ +
Sbjct: 461 --KGIIYRDLKLDNVMLDSEGHIKIADFGMC-------KENIWDGVTTKXFCGTPDYIAP 511
Query: 622 S------YSCQSDVYSLGVVMLELLTGRKPYD 647
Y D ++ GV++ E+L G+ P++
Sbjct: 512 EIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFE 543
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 89/212 (41%), Gaps = 29/212 (13%)
Query: 448 IGEGLLGSVYKAELPG-GKLLAVKKLSNTVSQRQTDEEFLELASTISRL--RHGNIVELI 504
+G+G G V +E G +L AVK L V + D E + + L + + +L
Sbjct: 28 LGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLH 87
Query: 505 GYCNEHGQHLLVYDY--GGNCTLH-DLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEV 561
+ V +Y GG+ H + +E H F A A L +LQ
Sbjct: 88 SCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVF-------YAAEIAIGLFFLQS- 139
Query: 562 CEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFESG 621
I++ + K N++LD + ++++D G+ + +G+ T G P++ +
Sbjct: 140 --KGIIYRDLKLDNVMLDSEGHIKIADFGMC-------KENIWDGVTTKXFCGTPDYIAP 190
Query: 622 S------YSCQSDVYSLGVVMLELLTGRKPYD 647
Y D ++ GV++ E+L G+ P++
Sbjct: 191 EIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFE 222
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 99/217 (45%), Gaps = 22/217 (10%)
Query: 436 QQYTNSFSEGNFIGEGLLGSVYKA-ELPGGKLLAVKKLSNT---VSQRQTDEEFLELAST 491
+++ + + + IG+G G V KA + + +A+K + N ++Q Q + LEL +
Sbjct: 31 EKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNK 90
Query: 492 ISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGA 551
IV L + LV++ + L+DLL + + S N+ + A
Sbjct: 91 HDTEMKYYIVHLKRHFMFRNHLCLVFEML-SYNLYDLLRNTN--FRGVSLNLTRKFAQQM 147
Query: 552 ARALQYLQEVCEPPIVHGNFKSSNILL--DEKLIVRVSDCGLAPLLFSGSTNELSEGL-- 607
AL +L E I+H + K NILL ++ +++ D G S+ +L + +
Sbjct: 148 CTALLFLA-TPELSIIHCDLKPENILLCNPKRSAIKIVDFG--------SSCQLGQRIYQ 198
Query: 608 -LTAHGSGAPEFESGS-YSCQSDVYSLGVVMLELLTG 642
+ + +PE G Y D++SLG +++E+ TG
Sbjct: 199 XIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTG 235
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 44/88 (50%), Gaps = 13/88 (14%)
Query: 566 IVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFESGS--- 622
I++ + K N++LD + ++++D G+ + +G+ T G P++ +
Sbjct: 141 IIYRDLKLDNVMLDSEGHIKIADFGMC-------KEHMMDGVTTREFCGTPDYIAPEIIA 193
Query: 623 ---YSCQSDVYSLGVVMLELLTGRKPYD 647
Y D ++ GV++ E+L G+ P+D
Sbjct: 194 YQPYGKSVDWWAYGVLLYEMLAGQPPFD 221
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 99/217 (45%), Gaps = 22/217 (10%)
Query: 436 QQYTNSFSEGNFIGEGLLGSVYKA-ELPGGKLLAVKKLSNT---VSQRQTDEEFLELAST 491
+++ + + + IG+G G V KA + + +A+K + N ++Q Q + LEL +
Sbjct: 50 EKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNK 109
Query: 492 ISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGA 551
IV L + LV++ + L+DLL + + S N+ + A
Sbjct: 110 HDTEMKYYIVHLKRHFMFRNHLCLVFEML-SYNLYDLLRNTN--FRGVSLNLTRKFAQQM 166
Query: 552 ARALQYLQEVCEPPIVHGNFKSSNILL--DEKLIVRVSDCGLAPLLFSGSTNELSEGL-- 607
AL +L E I+H + K NILL ++ +++ D G S+ +L + +
Sbjct: 167 CTALLFLA-TPELSIIHCDLKPENILLCNPKRSAIKIVDFG--------SSCQLGQRIYQ 217
Query: 608 -LTAHGSGAPEFESGS-YSCQSDVYSLGVVMLELLTG 642
+ + +PE G Y D++SLG +++E+ TG
Sbjct: 218 XIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTG 254
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 8/96 (8%)
Query: 554 ALQYLQEVCEPPIVHGNFKSSNILLDEK---LIVRVSDCGLAPLLFSGSTNELSEGLLTA 610
A+QYL + I H + K N+L K I++++D G A + S N L+ T
Sbjct: 133 AIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE--TTSHNSLTTPCYTP 187
Query: 611 HGSGAPEFESGSYSCQSDVYSLGVVMLELLTGRKPY 646
+ Y D++SLGV+M LL G P+
Sbjct: 188 YYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 223
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 94/231 (40%), Gaps = 30/231 (12%)
Query: 431 TIASLQQYTNSFSEGNFIGEGLLGSVYKA-ELPGGKLLA---VKKLSNTVSQRQTDEEFL 486
T+ + + + G +G G V K E G A +KK S+R E +
Sbjct: 2 TVFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDI 61
Query: 487 EL-ASTISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRI 545
E S + ++H N++ L +L+ + L D L E ++ + +
Sbjct: 62 EREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEF-L 120
Query: 546 RVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLI----VRVSDCGLAPLLFSGSTN 601
+ L L LQ I H + K NI+L ++ + +++ D GLA + G N
Sbjct: 121 KQILNGVYYLHSLQ------IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG--N 172
Query: 602 ELSEGLLTAHGSGAPEF---ESGSYS---CQSDVYSLGVVMLELLTGRKPY 646
E G PEF E +Y ++D++S+GV+ LL+G P+
Sbjct: 173 EFKNIF------GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 8/96 (8%)
Query: 554 ALQYLQEVCEPPIVHGNFKSSNILLDEK---LIVRVSDCGLAPLLFSGSTNELSEGLLTA 610
A+QYL + I H + K N+L K I++++D G A + S N L+ T
Sbjct: 134 AIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE--TTSHNSLTTPCYTP 188
Query: 611 HGSGAPEFESGSYSCQSDVYSLGVVMLELLTGRKPY 646
+ Y D++SLGV+M LL G P+
Sbjct: 189 YYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 224
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 53/110 (48%), Gaps = 20/110 (18%)
Query: 545 IRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELS 604
+ + L A A+++L ++H + K SNI +V+V D GL + +E
Sbjct: 121 LHIFLQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAM---DQDEEE 174
Query: 605 EGLLT-----AHGSG--------APE-FESGSYSCQSDVYSLGVVMLELL 640
+ +LT A +G +PE SYS + D++SLG+++ ELL
Sbjct: 175 QTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 8/96 (8%)
Query: 554 ALQYLQEVCEPPIVHGNFKSSNILLDEK---LIVRVSDCGLAPLLFSGSTNELSEGLLTA 610
A+QYL + I H + K N+L K I++++D G A + S N L+ T
Sbjct: 135 AIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE--TTSHNSLTTPCYTP 189
Query: 611 HGSGAPEFESGSYSCQSDVYSLGVVMLELLTGRKPY 646
+ Y D++SLGV+M LL G P+
Sbjct: 190 YYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 225
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 8/96 (8%)
Query: 554 ALQYLQEVCEPPIVHGNFKSSNILLDEK---LIVRVSDCGLAPLLFSGSTNELSEGLLTA 610
A+QYL + I H + K N+L K I++++D G A + S N L+ T
Sbjct: 128 AIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE--TTSHNSLTTPCYTP 182
Query: 611 HGSGAPEFESGSYSCQSDVYSLGVVMLELLTGRKPY 646
+ Y D++SLGV+M LL G P+
Sbjct: 183 YYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 218
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 8/96 (8%)
Query: 554 ALQYLQEVCEPPIVHGNFKSSNILLDEK---LIVRVSDCGLAPLLFSGSTNELSEGLLTA 610
A+QYL + I H + K N+L K I++++D G A + S N L+ T
Sbjct: 129 AIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE--TTSHNSLTTPCYTP 183
Query: 611 HGSGAPEFESGSYSCQSDVYSLGVVMLELLTGRKPY 646
+ Y D++SLGV+M LL G P+
Sbjct: 184 YYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 219
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 44/212 (20%), Positives = 88/212 (41%), Gaps = 33/212 (15%)
Query: 448 IGEGLLGSVYKAELPGGKLLAVKKLSNT---VSQRQTDEEFLELASTISRLRHGNIVELI 504
+G G G V++ + V K NT + + E S +++L H ++ L
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEI----SIMNQLHHPKLINLH 114
Query: 505 GYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCE- 563
+ + +L+ ++ L D + +++ + A + Y+++ CE
Sbjct: 115 DAFEDKYEMVLILEFLSGGELFDRIAAED-------------YKMSEAEVINYMRQACEG 161
Query: 564 ------PPIVHGNFKSSNILLDEKLI--VRVSDCGLAPLLFSGSTNELSEGLLTAHGSGA 615
IVH + K NI+ + K V++ D GLA L + +E+ + A
Sbjct: 162 LKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKL---NPDEIVKVTTATAEFAA 218
Query: 616 PEF-ESGSYSCQSDVYSLGVVMLELLTGRKPY 646
PE + +D++++GV+ LL+G P+
Sbjct: 219 PEIVDREPVGFYTDMWAIGVLGYVLLSGLSPF 250
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 8/96 (8%)
Query: 554 ALQYLQEVCEPPIVHGNFKSSNILLDEK---LIVRVSDCGLAPLLFSGSTNELSEGLLTA 610
A+QYL + I H + K N+L K I++++D G A + S N L+ T
Sbjct: 127 AIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE--TTSHNSLTTPCYTP 181
Query: 611 HGSGAPEFESGSYSCQSDVYSLGVVMLELLTGRKPY 646
+ Y D++SLGV+M LL G P+
Sbjct: 182 YYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 217
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 8/96 (8%)
Query: 554 ALQYLQEVCEPPIVHGNFKSSNILLDEK---LIVRVSDCGLAPLLFSGSTNELSEGLLTA 610
A+QYL + I H + K N+L K I++++D G A + S N L+ T
Sbjct: 143 AIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE--TTSHNSLTTPCYTP 197
Query: 611 HGSGAPEFESGSYSCQSDVYSLGVVMLELLTGRKPY 646
+ Y D++SLGV+M LL G P+
Sbjct: 198 YYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 233
>pdb|2V62|A Chain A, Structure Of Vaccinia-Related Kinase 2
pdb|2V62|B Chain B, Structure Of Vaccinia-Related Kinase 2
Length = 345
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 54/106 (50%), Gaps = 10/106 (9%)
Query: 553 RALQYLQEVCEPPIVHGNFKSSNILLDEK--LIVRVSDCGLAPLLF-SGSTNELSEGLLT 609
R L L+ + E VHG+ K++N+LL K V ++D GL+ +G+ + E
Sbjct: 159 RMLDVLEYIHENEYVHGDIKAANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQENPRK 218
Query: 610 AHGSGAPEFES------GSYSCQSDVYSLGVVMLELLTGRKPYDRS 649
H +G EF S + S +SDV LG ML L G+ P++++
Sbjct: 219 GH-NGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQN 263
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 8/96 (8%)
Query: 554 ALQYLQEVCEPPIVHGNFKSSNILLDEK---LIVRVSDCGLAPLLFSGSTNELSEGLLTA 610
A+QYL + I H + K N+L K I++++D G A + S N L+ T
Sbjct: 129 AIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE--TTSHNSLTTPCYTP 183
Query: 611 HGSGAPEFESGSYSCQSDVYSLGVVMLELLTGRKPY 646
+ Y D++SLGV+M LL G P+
Sbjct: 184 YYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 219
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 121/280 (43%), Gaps = 40/280 (14%)
Query: 440 NSFSEGNFIGEGLLGSVYKA-ELPGGKLLAVKKLSNTVSQRQTDEEFLELASTI-SRLRH 497
+ F G +G+G G+VY A E ++A+K L + +++ E L I + L H
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 498 GNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQY 557
NI+ L Y + + L+ +Y L+ L ++ + I +A AL Y
Sbjct: 83 PNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELA----DALMY 138
Query: 558 LQEVCE-PPIVHGNFKSSNILLDEKLIVRVSDCGL---APLLFSGSTNELSEGLLTAHGS 613
C ++H + K N+LL K ++++D G AP L + + L
Sbjct: 139 ----CHGKKVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRKTMCGTLDYL------ 188
Query: 614 GAPEFESGS-YSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALS 672
PE G ++ + D++ +GV+ ELL G P++ + H+ +
Sbjct: 189 -PPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESAS---------------HN-ETYR 231
Query: 673 RMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEI 712
R+V +D + A + D+IS+ ++ P R P++++
Sbjct: 232 RIV--KVDLKFPASVPTGAQDLISKLLRHNPSERLPLAQV 269
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 39/85 (45%), Gaps = 5/85 (5%)
Query: 566 IVHGNFKSSNIL-LDEK---LIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFESG 621
+VH + K SNIL +DE +R+ D G A L L TA+ E
Sbjct: 137 VVHRDLKPSNILYVDESGNPESIRICDFGFAKQL-RAENGLLXTPCYTANFVAPEVLERQ 195
Query: 622 SYSCQSDVYSLGVVMLELLTGRKPY 646
Y D++SLGV++ LTG P+
Sbjct: 196 GYDAACDIWSLGVLLYTXLTGYTPF 220
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 8/96 (8%)
Query: 554 ALQYLQEVCEPPIVHGNFKSSNILLDEK---LIVRVSDCGLAPLLFSGSTNELSEGLLTA 610
A+QYL + I H + K N+L K I++++D G A + S N L+ T
Sbjct: 173 AIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYTP 227
Query: 611 HGSGAPEFESGSYSCQSDVYSLGVVMLELLTGRKPY 646
+ Y D++SLGV+M LL G P+
Sbjct: 228 YYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 263
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 102/219 (46%), Gaps = 23/219 (10%)
Query: 431 TIASLQQYTNSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTV-SQRQTDEEFLELA 489
T L++Y N G+ +G++ + Y A L +A+KKLS +Q + EL
Sbjct: 19 TFTVLKRYQNLKPIGSG-AQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELV 75
Query: 490 STISRLRHGNIVELIGYCN-----EHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIR 544
+ + H NI+ L+ E Q + + + L ++ E H++ S+ +
Sbjct: 76 -LMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQM-ELDHERMSY-LL 132
Query: 545 IRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELS 604
++ +G ++ + I+H + K SNI++ +++ D GLA +G++ ++
Sbjct: 133 YQMLVG-------IKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLART--AGTSFMMT 183
Query: 605 EGLLTAHGSGAPEFESG-SYSCQSDVYSLGVVMLELLTG 642
++T + APE G Y D++S+G +M E++ G
Sbjct: 184 PYVVTRYYR-APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 8/96 (8%)
Query: 554 ALQYLQEVCEPPIVHGNFKSSNILLDEK---LIVRVSDCGLAPLLFSGSTNELSEGLLTA 610
A+QYL + I H + K N+L K I++++D G A + S N L+ T
Sbjct: 179 AIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYTP 233
Query: 611 HGSGAPEFESGSYSCQSDVYSLGVVMLELLTGRKPY 646
+ Y D++SLGV+M LL G P+
Sbjct: 234 YYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 269
>pdb|3OP5|A Chain A, Human Vaccinia-Related Kinase 1
pdb|3OP5|B Chain B, Human Vaccinia-Related Kinase 1
pdb|3OP5|C Chain C, Human Vaccinia-Related Kinase 1
pdb|3OP5|D Chain D, Human Vaccinia-Related Kinase 1
Length = 364
Score = 37.4 bits (85), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 61/136 (44%), Gaps = 25/136 (18%)
Query: 527 DLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEK--LIV 584
DL E K+FS ++++L R L L+ + E VHG+ K+SN+LL+ K V
Sbjct: 137 DLQKIYEANAKRFSRKTVLQLSL---RILDILEYIHEHEYVHGDIKASNLLLNYKNPDQV 193
Query: 585 RVSDCGLAPLL--------FSGSTNELSEGLLT-----AHGSGAPEFESGSYSCQSDVYS 631
+ D GLA ++ +G + AH AP S + D+
Sbjct: 194 YLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAP-------SRRGDLEI 246
Query: 632 LGVVMLELLTGRKPYD 647
LG M++ LTG P++
Sbjct: 247 LGYCMIQWLTGHLPWE 262
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 37.4 bits (85), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 101/220 (45%), Gaps = 23/220 (10%)
Query: 431 TIASLQQYTNSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTV-SQRQTDEEFLELA 489
T L++Y N G+ +G++ + Y A L + +A+KKLS +Q + EL
Sbjct: 19 TFTVLKRYQNLKPIGSG-AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELV 75
Query: 490 STISRLRHGNIVELIGYCN-----EHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIR 544
+ + H NI+ L+ E Q + + + L ++ E H++ S+ +
Sbjct: 76 -LMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQM-ELDHERMSYLL- 132
Query: 545 IRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELS 604
+ L ++ + I+H + K SNI++ +++ D GLA +G++ ++
Sbjct: 133 -------YQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLART--AGTSFMMT 183
Query: 605 EGLLTAHGSGAPEFESG-SYSCQSDVYSLGVVMLELLTGR 643
++T + APE G Y D++S+G +M E++ +
Sbjct: 184 PYVVTRYYR-APEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 16/92 (17%)
Query: 566 IVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEF------E 619
+++ + K N+L+DE+ ++V+D G A + G T L G PE+
Sbjct: 149 LIYRDLKPENLLIDEQGYIQVTDFGFAKRV-KGRTWXL---------CGTPEYLAPEIIL 198
Query: 620 SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRP 651
S Y+ D ++LGV++ E+ G P+ +P
Sbjct: 199 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 230
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 67/159 (42%), Gaps = 14/159 (8%)
Query: 497 HGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQ 556
H NIV+L ++ LV + L + + + K FS + A+
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELLNGGELFERI----KKKKHFSETEASYIMRKLVSAVS 120
Query: 557 YLQEVCEPPIVHGNFKSSNILL---DEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGS 613
++ +V +VH + K N+L ++ L +++ D G A L L T H +
Sbjct: 121 HMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLK-PPDNQPLKTPCFTLHYA 176
Query: 614 GAPEFESGSYSCQSDVYSLGVVMLELLTGRKPY---DRS 649
Y D++SLGV++ +L+G+ P+ DRS
Sbjct: 177 APELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRS 215
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 93/226 (41%), Gaps = 20/226 (8%)
Query: 431 TIASLQQYTNSFSEGNFIGEGLLGSVYKA-ELPGGKLLA---VKKLSNTVSQRQTDEEFL 486
T+ + + + G +G G V K E G A +KK S+R E +
Sbjct: 2 TVFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDI 61
Query: 487 EL-ASTISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRI 545
E S + ++H N++ L +L+ + L D L E ++ + +
Sbjct: 62 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEF-L 120
Query: 546 RVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLI----VRVSDCGLAPLLFSGSTN 601
+ L L LQ I H + K NI+L ++ + +++ D GLA + G N
Sbjct: 121 KQILNGVYYLHSLQ------IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG--N 172
Query: 602 ELSEGLLTAHGSGAPEFESGS-YSCQSDVYSLGVVMLELLTGRKPY 646
E + + APE + ++D++S+GV+ LL+G P+
Sbjct: 173 EF-KNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 46/92 (50%), Gaps = 16/92 (17%)
Query: 566 IVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEF------E 619
+++ + K N+L+D++ ++V+D G A + G T L +G PE+
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXL---------AGTPEYLAPEIIL 211
Query: 620 SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRP 651
S Y+ D ++LGV++ E+ G P+ +P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 100/219 (45%), Gaps = 23/219 (10%)
Query: 431 TIASLQQYTNSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTV-SQRQTDEEFLELA 489
T L++Y N G+ +G++ + Y A L +A+KKLS +Q + EL
Sbjct: 19 TFTVLKRYQNLKPIGSG-AQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELV 75
Query: 490 STISRLRHGNIVELIGYCN-----EHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIR 544
+ + H NI+ L+ E Q + + + L ++ E H++ S+ +
Sbjct: 76 -LMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQM-ELDHERMSYLL- 132
Query: 545 IRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELS 604
+ L ++ + I+H + K SNI++ +++ D GLA +G++ ++
Sbjct: 133 -------YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLART--AGTSFMMT 183
Query: 605 EGLLTAHGSGAPEFESG-SYSCQSDVYSLGVVMLELLTG 642
++T + APE G Y D++S+G +M E++ G
Sbjct: 184 PYVVTRYYR-APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 46/92 (50%), Gaps = 16/92 (17%)
Query: 566 IVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEF------E 619
+++ + K N+++D++ ++V+D GLA + G T L G PE+
Sbjct: 162 LIYRDLKPENLMIDQQGYIKVTDFGLAKRV-KGRTWXL---------CGTPEYLAPEIIL 211
Query: 620 SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRP 651
S Y+ D ++LGV++ E+ G P+ +P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 36.6 bits (83), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 100/219 (45%), Gaps = 23/219 (10%)
Query: 431 TIASLQQYTNSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTV-SQRQTDEEFLELA 489
T L++Y N G+ +G++ + Y A L +A+KKLS +Q + EL
Sbjct: 19 TFTVLKRYQNLKPIGSG-AQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELV 75
Query: 490 STISRLRHGNIVELIGYCN-----EHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIR 544
+ + H NI+ L+ E Q + + + L ++ E H++ S+ +
Sbjct: 76 -LMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM-ELDHERMSYLL- 132
Query: 545 IRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELS 604
+ L ++ + I+H + K SNI++ +++ D GLA +G++ ++
Sbjct: 133 -------YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMT 183
Query: 605 EGLLTAHGSGAPEFESG-SYSCQSDVYSLGVVMLELLTG 642
++T + APE G Y D++S+G +M E++ G
Sbjct: 184 PEVVTRYYR-APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 36.6 bits (83), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 16/92 (17%)
Query: 566 IVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEF------E 619
+++ + K N+L+D++ ++V+D G A + G T L G PE+
Sbjct: 162 LIYRDLKPENLLIDQQGYIKVADFGFAKRV-KGRTWXL---------CGTPEYLAPEIIL 211
Query: 620 SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRP 651
S Y+ D ++LGV++ E+ G P+ +P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 36.6 bits (83), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 101/220 (45%), Gaps = 23/220 (10%)
Query: 431 TIASLQQYTNSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTV-SQRQTDEEFLELA 489
T L++Y N G+ +G++ + Y A L + +A+KKLS +Q + EL
Sbjct: 12 TFTVLKRYQNLKPIGSG-AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELV 68
Query: 490 STISRLRHGNIVELIGYCN-----EHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIR 544
+ + H NI+ L+ E Q + + + L ++ E H++ S+ +
Sbjct: 69 -LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQM-ELDHERMSYLL- 125
Query: 545 IRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELS 604
+ L ++ + I+H + K SNI++ +++ D GLA +G++ ++
Sbjct: 126 -------YQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLART--AGTSFMMT 176
Query: 605 EGLLTAHGSGAPEFESG-SYSCQSDVYSLGVVMLELLTGR 643
++T + APE G Y D++S+G +M E++ +
Sbjct: 177 PYVVTRYYR-APEVILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 36.6 bits (83), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 100/219 (45%), Gaps = 23/219 (10%)
Query: 431 TIASLQQYTNSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTV-SQRQTDEEFLELA 489
T L++Y N G+ +G++ + Y A L +A+KKLS +Q + EL
Sbjct: 19 TFTVLKRYQNLKPIGSG-AQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELV 75
Query: 490 STISRLRHGNIVELIGYCN-----EHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIR 544
+ + H NI+ L+ E Q + + + L ++ E H++ S+ +
Sbjct: 76 -LMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQM-ELDHERMSYLL- 132
Query: 545 IRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELS 604
+ L ++ + I+H + K SNI++ +++ D GLA +G++ ++
Sbjct: 133 -------YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMT 183
Query: 605 EGLLTAHGSGAPEFESG-SYSCQSDVYSLGVVMLELLTG 642
++T + APE G Y D++S+G +M E++ G
Sbjct: 184 PYVVTRYYR-APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 36.6 bits (83), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 16/92 (17%)
Query: 566 IVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEF------E 619
+++ + K N+L+D++ ++V+D G A + G T L G PE+
Sbjct: 162 LIYRDLKPENLLIDQQGYIKVADFGFAKRV-KGRTWXL---------CGTPEYLAPEIIL 211
Query: 620 SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRP 651
S Y+ D ++LGV++ E+ G P+ +P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 36.6 bits (83), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 16/92 (17%)
Query: 566 IVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEF------E 619
+++ + K N+L+D++ ++V+D G A + G T L G PE+
Sbjct: 163 LIYRDLKPENLLIDQQGYIKVADFGFAKRV-KGRTWXL---------CGTPEYLAPEIIL 212
Query: 620 SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRP 651
S Y+ D ++LGV++ E+ G P+ +P
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 36.6 bits (83), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 16/92 (17%)
Query: 566 IVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEF------E 619
+++ + K N+L+D++ ++V+D G A + G T L G PE+
Sbjct: 162 LIYRDLKPENLLIDQQGYIKVADFGFAKRV-KGRTWXL---------CGTPEYLAPEIIL 211
Query: 620 SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRP 651
S Y+ D ++LGV++ E+ G P+ +P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 36.6 bits (83), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 46/92 (50%), Gaps = 16/92 (17%)
Query: 566 IVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEF------E 619
+++ + K N+++D++ ++V+D GLA + G T L G PE+
Sbjct: 162 LIYRDLKPENLMIDQQGYIQVTDFGLAKRV-KGRTWXL---------CGTPEYLAPEIIL 211
Query: 620 SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRP 651
S Y+ D ++LGV++ E+ G P+ +P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 36.6 bits (83), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 46/92 (50%), Gaps = 16/92 (17%)
Query: 566 IVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEF------E 619
+++ + K N+L+D++ ++V+D G A + G+T L G PE+
Sbjct: 183 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGATWTL---------CGTPEYLAPEIIL 232
Query: 620 SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRP 651
S Y+ D ++LGV++ E+ G P+ +P
Sbjct: 233 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 264
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 36.2 bits (82), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 16/92 (17%)
Query: 566 IVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEF------E 619
+++ + K N+L+D++ ++V+D G A + G T L G PE+
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXL---------XGTPEYLAPEIIL 211
Query: 620 SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRP 651
S Y+ D ++LGV++ E+ G P+ +P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 36.2 bits (82), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 47/240 (19%), Positives = 95/240 (39%), Gaps = 35/240 (14%)
Query: 432 IASLQQYTNSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTD--------- 482
+ +Y N + + +G + E K A+KK ++ +++ D
Sbjct: 23 VKEKDKYINDYRIIRTLNQGKFNKIILCE-KDNKFYALKKYEKSLLEKKRDFTKSNNDKI 81
Query: 483 ------EEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEE-- 534
++F I+ +++ + G + + ++Y+Y N +L DE
Sbjct: 82 SIKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMEN---DSILKFDEYFF 138
Query: 535 -AHKKFSWNIRIRVALGAARAL----QYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDC 589
K ++ I I+V +++ Y+ E I H + K SNIL+D+ V++SD
Sbjct: 139 VLDKNYTCFIPIQVIKCIIKSVLNSFSYIHN--EKNICHRDVKPSNILMDKNGRVKLSDF 196
Query: 590 GLAPLLFSGSTNELSEGLLTAHGSGAPEF---ESGSYSCQSDVYSLGVVMLELLTGRKPY 646
G + + +G + PEF ES + D++SLG+ + + P+
Sbjct: 197 GESEYMVDKKI----KGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPF 252
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 36.2 bits (82), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 101/220 (45%), Gaps = 23/220 (10%)
Query: 431 TIASLQQYTNSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTV-SQRQTDEEFLELA 489
T L++Y N G+ +G++ + Y A L + +A+KKLS +Q + EL
Sbjct: 19 TFTVLKRYQNLKPIGSG-AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELV 75
Query: 490 STISRLRHGNIVELIGYCN-----EHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIR 544
+ + H NI+ L+ E Q + + + L ++ E H++ S+ +
Sbjct: 76 -LMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQM-ELDHERMSYLL- 132
Query: 545 IRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELS 604
+ L ++ + I+H + K SNI++ +++ D GLA +G++ ++
Sbjct: 133 -------YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLART--AGTSFMMT 183
Query: 605 EGLLTAHGSGAPEFESG-SYSCQSDVYSLGVVMLELLTGR 643
++T + APE G Y D++S+G +M E++ +
Sbjct: 184 PYVVTRYYR-APEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 36.2 bits (82), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 100/219 (45%), Gaps = 23/219 (10%)
Query: 431 TIASLQQYTNSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTV-SQRQTDEEFLELA 489
T L++Y N G+ +G++ + Y A L +A+KKLS +Q + EL
Sbjct: 19 TFTVLKRYQNLKPIGSG-AQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELV 75
Query: 490 STISRLRHGNIVELIGYCN-----EHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIR 544
+ + H NI+ L+ E Q + + + L ++ E H++ S+ +
Sbjct: 76 -LMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQM-ELDHERMSYLL- 132
Query: 545 IRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELS 604
+ L ++ + I+H + K SNI++ +++ D GLA +G++ ++
Sbjct: 133 -------YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLART--AGTSFMMT 183
Query: 605 EGLLTAHGSGAPEFESG-SYSCQSDVYSLGVVMLELLTG 642
++T + APE G Y D++S+G +M E++ G
Sbjct: 184 PYVVTRYYR-APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 36.2 bits (82), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 98/217 (45%), Gaps = 28/217 (12%)
Query: 476 VSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQ-HL-LVYDYGGNCTLHDL--LHS 531
+ R E+ + + + +L H N+V+L+ ++ + HL +V++ + ++ L
Sbjct: 74 IQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKP 133
Query: 532 DEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGL 591
E +F + I+ ++YL I+H + K SN+L+ E ++++D G+
Sbjct: 134 LSEDQARFYFQDLIK-------GIEYLHY---QKIIHRDIKPSNLLVGEDGHIKIADFGV 183
Query: 592 APLLFSGSTNELSEGLLTAHGSGAPEFESGSYSCQS----DVYSLGVVMLELLTGRKPYD 647
+ F GS LS + T APE S + S DV+++GV + + G+ P+
Sbjct: 184 SN-EFKGSDALLSNTVGTP-AFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFM 241
Query: 648 RSRPRGEQSLVR---WAIPRLHDI-----DALSRMVD 676
R S ++ P DI D ++RM+D
Sbjct: 242 DERIMCLHSKIKSQALEFPDQPDIAEDLKDLITRMLD 278
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 36.2 bits (82), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 86/203 (42%), Gaps = 16/203 (7%)
Query: 448 IGEGLLGSVYKAE-LPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGY 506
IGEG G+V+KA+ +++A+K++ L + L+H NIV L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 507 CNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKF-SWNIRIRVALGAARALQYLQEV--CE 563
+ + LV+++ D++ K F S N + + + Q L+ + C
Sbjct: 70 LHSDKKLTLVFEF-----------CDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH 118
Query: 564 PP-IVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFESGS 622
++H + K N+L++ +++++ GLA +E + + F +
Sbjct: 119 SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKL 178
Query: 623 YSCQSDVYSLGVVMLELLTGRKP 645
YS D++S G + EL +P
Sbjct: 179 YSTSIDMWSAGCIFAELANAGRP 201
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 36.2 bits (82), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 101/220 (45%), Gaps = 23/220 (10%)
Query: 431 TIASLQQYTNSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTV-SQRQTDEEFLELA 489
T L++Y N G+ +G++ + Y A L + +A+KKLS +Q + EL
Sbjct: 19 TFTVLKRYQNLKPIGSG-AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELV 75
Query: 490 STISRLRHGNIVELIGYCN-----EHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIR 544
+ + H NI+ L+ E Q + + + L ++ E H++ S+ +
Sbjct: 76 -LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQM-ELDHERMSYLL- 132
Query: 545 IRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELS 604
+ L ++ + I+H + K SNI++ +++ D GLA +G++ ++
Sbjct: 133 -------YQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLART--AGTSFMMT 183
Query: 605 EGLLTAHGSGAPEFESG-SYSCQSDVYSLGVVMLELLTGR 643
++T + APE G Y D++S+G +M E++ +
Sbjct: 184 PYVVTRYYR-APEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 36.2 bits (82), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 16/92 (17%)
Query: 566 IVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEF------E 619
+++ + K N+L+D++ ++V+D G A + G T L G PE+
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXL---------CGTPEYLAPEIIL 211
Query: 620 SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRP 651
S Y+ D ++LGV++ E+ G P+ +P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 35.8 bits (81), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 55/129 (42%), Gaps = 25/129 (19%)
Query: 523 CTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKL 582
C+L D H + + + + A A+++L ++H + K SNI
Sbjct: 156 CSLEDREHG-----------VCLHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDD 201
Query: 583 IVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG----------APE-FESGSYSCQSDVYS 631
+V+V D GL + + + A+ + +PE +YS + D++S
Sbjct: 202 VVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFS 261
Query: 632 LGVVMLELL 640
LG+++ ELL
Sbjct: 262 LGLILFELL 270
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 35.8 bits (81), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 60/144 (41%), Gaps = 5/144 (3%)
Query: 437 QYTNSFSEGNFIGEGLLGSVYK-AELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRL 495
+YT F E IG G GSV+K + G + A+K+ ++ ++ L + L
Sbjct: 8 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVL 67
Query: 496 -RHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARA 554
+H ++V E L+ +Y +L D + + F + L R
Sbjct: 68 GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRG 127
Query: 555 LQYLQEVCEPPIVHGNFKSSNILL 578
L+Y+ + +VH + K SNI +
Sbjct: 128 LRYIHSMS---LVHMDIKPSNIFI 148
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 35.8 bits (81), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 16/92 (17%)
Query: 566 IVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEF------E 619
+++ + K N+L+D++ ++V+D G A + G T L G PE+
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXL---------CGTPEYLAPEIIL 211
Query: 620 SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRP 651
S Y+ D ++LGV++ E+ G P+ +P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 35.8 bits (81), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 16/92 (17%)
Query: 566 IVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEF------E 619
+++ + K N+L+D++ ++V+D G A + G T L G PE+
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXL---------CGTPEYLAPEIIL 211
Query: 620 SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRP 651
S Y+ D ++LGV++ E+ G P+ +P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 35.8 bits (81), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 16/92 (17%)
Query: 566 IVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEF------E 619
+++ + K N+L+D++ ++V+D G A + G T L G PE+
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXL---------CGTPEYLAPEIIL 212
Query: 620 SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRP 651
S Y+ D ++LGV++ E+ G P+ +P
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 35.8 bits (81), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 16/92 (17%)
Query: 566 IVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEF------E 619
+++ + K N+L+D++ ++V+D G A + G T L G PE+
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXL---------CGTPEYLAPEIIL 211
Query: 620 SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRP 651
S Y+ D ++LGV++ E+ G P+ +P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 35.8 bits (81), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 60/144 (41%), Gaps = 5/144 (3%)
Query: 437 QYTNSFSEGNFIGEGLLGSVYK-AELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRL 495
+YT F E IG G GSV+K + G + A+K+ ++ ++ L + L
Sbjct: 6 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVL 65
Query: 496 -RHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARA 554
+H ++V E L+ +Y +L D + + F + L R
Sbjct: 66 GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRG 125
Query: 555 LQYLQEVCEPPIVHGNFKSSNILL 578
L+Y+ + +VH + K SNI +
Sbjct: 126 LRYIHSMS---LVHMDIKPSNIFI 146
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 35.8 bits (81), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 16/92 (17%)
Query: 566 IVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEF------E 619
+++ + K N+L+D++ ++V+D G A + G T L G PE+
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXL---------CGTPEYLAPEIIL 211
Query: 620 SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRP 651
S Y+ D ++LGV++ E+ G P+ +P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 35.8 bits (81), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 16/92 (17%)
Query: 566 IVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEF------E 619
+++ + K N+L+D++ ++V+D G A + G T L G PE+
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXL---------CGTPEYLAPEIIL 211
Query: 620 SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRP 651
S Y+ D ++LGV++ E+ G P+ +P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 35.8 bits (81), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 16/92 (17%)
Query: 566 IVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEF------E 619
+++ + K N+L+D++ ++V+D G A + G T L G PE+
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXL---------CGTPEYLAPEIIL 211
Query: 620 SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRP 651
S Y+ D ++LGV++ E+ G P+ +P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 35.8 bits (81), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 100/219 (45%), Gaps = 23/219 (10%)
Query: 431 TIASLQQYTNSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTV-SQRQTDEEFLELA 489
T L++Y N G+ +G++ + Y A L +A+KKLS +Q + EL
Sbjct: 19 TFTVLKRYQNLKPIGSG-AQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELV 75
Query: 490 STISRLRHGNIVELIGYCN-----EHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIR 544
+ + H NI+ L+ E Q + + + L ++ E H++ S+ +
Sbjct: 76 -LMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM-ELDHERMSYLL- 132
Query: 545 IRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELS 604
+ L ++ + I+H + K SNI++ +++ D GLA +G++ ++
Sbjct: 133 -------YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMT 183
Query: 605 EGLLTAHGSGAPEFESG-SYSCQSDVYSLGVVMLELLTG 642
++T + APE G Y D++S+G +M E++ G
Sbjct: 184 PYVVTRYYR-APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 35.8 bits (81), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 16/92 (17%)
Query: 566 IVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEF------E 619
+++ + K N+L+D++ ++V+D G A + G T L G PE+
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXL---------CGTPEYLAPEIIL 211
Query: 620 SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRP 651
S Y+ D ++LGV++ E+ G P+ +P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 35.8 bits (81), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 16/92 (17%)
Query: 566 IVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEF------E 619
+++ + K N+L+D++ ++V+D G A + G T L G PE+
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXL---------CGTPEYLAPEIIL 211
Query: 620 SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRP 651
S Y+ D ++LGV++ E+ G P+ +P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 35.8 bits (81), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 16/92 (17%)
Query: 566 IVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEF------E 619
+++ + K N+L+D++ ++V+D G A + G T L G PE+
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXL---------CGTPEYLAPEIIL 212
Query: 620 SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRP 651
S Y+ D ++LGV++ E+ G P+ +P
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 35.8 bits (81), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 16/92 (17%)
Query: 566 IVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEF------E 619
+++ + K N+L+D++ ++V+D G A + G T L G PE+
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXL---------CGTPEYLAPEIIL 211
Query: 620 SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRP 651
S Y+ D ++LGV++ E+ G P+ +P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 35.8 bits (81), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 16/92 (17%)
Query: 566 IVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEF------E 619
+++ + K N+L+D++ ++V+D G A + G T L G PE+
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXL---------CGTPEYLAPEIIL 212
Query: 620 SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRP 651
S Y+ D ++LGV++ E+ G P+ +P
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 35.8 bits (81), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 16/92 (17%)
Query: 566 IVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEF------E 619
+++ + K N+L+D++ ++V+D G A + G T L G PE+
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXL---------CGTPEYLAPEIIL 211
Query: 620 SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRP 651
S Y+ D ++LGV++ E+ G P+ +P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 35.8 bits (81), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 16/92 (17%)
Query: 566 IVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEF------E 619
+++ + K N+L+D++ ++V+D G A + G T L G PE+
Sbjct: 157 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXL---------CGTPEYLAPEIIL 206
Query: 620 SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRP 651
S Y+ D ++LGV++ E+ G P+ +P
Sbjct: 207 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 238
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 35.8 bits (81), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 16/92 (17%)
Query: 566 IVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEF------E 619
+++ + K N+L+D++ ++V+D G A + G T L G PE+
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXL---------CGTPEYLAPEIIL 212
Query: 620 SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRP 651
S Y+ D ++LGV++ E+ G P+ +P
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 35.8 bits (81), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 16/92 (17%)
Query: 566 IVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEF------E 619
+++ + K N+L+D++ ++V+D G A + G T L G PE+
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXL---------CGTPEYLAPEIIL 211
Query: 620 SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRP 651
S Y+ D ++LGV++ E+ G P+ +P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 35.8 bits (81), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 16/92 (17%)
Query: 566 IVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEF------E 619
+++ + K N+L+D++ ++V+D G A + G T L G PE+
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXL---------CGTPEYLAPEIIL 211
Query: 620 SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRP 651
S Y+ D ++LGV++ E+ G P+ +P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 35.8 bits (81), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 16/92 (17%)
Query: 566 IVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEF------E 619
+++ + K N+L+D++ ++V+D G A + G T L G PE+
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXL---------CGTPEYLAPEIIL 211
Query: 620 SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRP 651
S Y+ D ++LGV++ E+ G P+ +P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 35.8 bits (81), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 16/92 (17%)
Query: 566 IVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEF------E 619
+++ + K N+L+D++ ++V+D G A + G T L G PE+
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXL---------CGTPEYLAPEIIL 212
Query: 620 SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRP 651
S Y+ D ++LGV++ E+ G P+ +P
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 35.8 bits (81), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 16/92 (17%)
Query: 566 IVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEF------E 619
+++ + K N+L+D++ ++V+D G A + G T L G PE+
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXL---------CGTPEYLAPEIIL 211
Query: 620 SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRP 651
S Y+ D ++LGV++ E+ G P+ +P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 35.8 bits (81), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 16/92 (17%)
Query: 566 IVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEF------E 619
+++ + K N+L+D++ ++V+D G A + G T L G PE+
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXL---------CGTPEYLAPEIIL 211
Query: 620 SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRP 651
S Y+ D ++LGV++ E+ G P+ +P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 35.8 bits (81), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 16/92 (17%)
Query: 566 IVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEF------E 619
+++ + K N+L+D++ ++V+D G A + G T L G PE+
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXL---------CGTPEYLAPEIIL 211
Query: 620 SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRP 651
S Y+ D ++LGV++ E+ G P+ +P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 35.8 bits (81), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 16/92 (17%)
Query: 566 IVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEF------E 619
+++ + K N+L+D++ ++V+D G A + G T L G PE+
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXL---------CGTPEYLAPAIIL 211
Query: 620 SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRP 651
S Y+ D ++LGV++ E+ G P+ +P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 35.8 bits (81), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 16/92 (17%)
Query: 566 IVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEF------E 619
+++ + K N+L+D++ ++V+D G A + G T L G PE+
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXL---------CGTPEYLAPEIIL 212
Query: 620 SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRP 651
S Y+ D ++LGV++ E+ G P+ +P
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 35.8 bits (81), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 16/92 (17%)
Query: 566 IVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEF------E 619
+++ + K N+L+D++ ++V+D G A + G T L G PE+
Sbjct: 155 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXL---------CGTPEYLAPEIIL 204
Query: 620 SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRP 651
S Y+ D ++LGV++ E+ G P+ +P
Sbjct: 205 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 236
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 35.8 bits (81), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 60/144 (41%), Gaps = 5/144 (3%)
Query: 437 QYTNSFSEGNFIGEGLLGSVYK-AELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRL 495
+YT F E IG G GSV+K + G + A+K+ ++ ++ L + L
Sbjct: 4 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVL 63
Query: 496 -RHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARA 554
+H ++V E L+ +Y +L D + + F + L R
Sbjct: 64 GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRG 123
Query: 555 LQYLQEVCEPPIVHGNFKSSNILL 578
L+Y+ + +VH + K SNI +
Sbjct: 124 LRYIHSMS---LVHMDIKPSNIFI 144
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 35.8 bits (81), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 60/144 (41%), Gaps = 5/144 (3%)
Query: 437 QYTNSFSEGNFIGEGLLGSVYK-AELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRL 495
+YT F E IG G GSV+K + G + A+K+ ++ ++ L + L
Sbjct: 6 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVL 65
Query: 496 -RHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARA 554
+H ++V E L+ +Y +L D + + F + L R
Sbjct: 66 GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRG 125
Query: 555 LQYLQEVCEPPIVHGNFKSSNILL 578
L+Y+ + +VH + K SNI +
Sbjct: 126 LRYIHSMS---LVHMDIKPSNIFI 146
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 35.8 bits (81), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 16/92 (17%)
Query: 566 IVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEF------E 619
+++ + K N+L+D++ ++V+D G A + G T L G PE+
Sbjct: 183 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXL---------CGTPEYLAPEIIL 232
Query: 620 SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRP 651
S Y+ D ++LGV++ E+ G P+ +P
Sbjct: 233 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 264
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 35.8 bits (81), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 16/92 (17%)
Query: 566 IVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEF------E 619
+++ + K N+L+D++ ++V+D G A + G T L G PE+
Sbjct: 148 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWTL---------CGTPEYLAPEIIL 197
Query: 620 SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRP 651
S Y+ D ++LGV++ E+ G P+ +P
Sbjct: 198 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 229
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 35.8 bits (81), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 16/92 (17%)
Query: 566 IVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEF------E 619
+++ + K N+L+D++ ++V+D G A + G T L G PE+
Sbjct: 155 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXL---------CGTPEYLAPEIIL 204
Query: 620 SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRP 651
S Y+ D ++LGV++ E+ G P+ +P
Sbjct: 205 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 236
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 35.8 bits (81), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 16/92 (17%)
Query: 566 IVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEF------E 619
+++ + K N+L+D++ ++V+D G A + G T L G PE+
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWTL---------CGTPEYLAPEIIL 212
Query: 620 SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRP 651
S Y+ D ++LGV++ E+ G P+ +P
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 35.8 bits (81), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 100/219 (45%), Gaps = 23/219 (10%)
Query: 431 TIASLQQYTNSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTV-SQRQTDEEFLELA 489
T L++Y N G+ +G++ + Y A L +A+KKLS +Q + EL
Sbjct: 20 TFTVLKRYQNLKPIGSG-AQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELV 76
Query: 490 STISRLRHGNIVELIGYCN-----EHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIR 544
+ + H NI+ L+ E Q + + + L ++ E H++ S+ +
Sbjct: 77 -LMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM-ELDHERMSYLL- 133
Query: 545 IRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELS 604
+ L ++ + I+H + K SNI++ +++ D GLA +G++ ++
Sbjct: 134 -------YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMT 184
Query: 605 EGLLTAHGSGAPEFESG-SYSCQSDVYSLGVVMLELLTG 642
++T + APE G Y D++S+G +M E++ G
Sbjct: 185 PYVVTRYYR-APEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 35.8 bits (81), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 16/92 (17%)
Query: 566 IVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEF------E 619
+++ + K N+L+D++ ++V+D G A + G T L G PE+
Sbjct: 183 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXL---------CGTPEYLAPEIIL 232
Query: 620 SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRP 651
S Y+ D ++LGV++ E+ G P+ +P
Sbjct: 233 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 264
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 35.8 bits (81), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 100/219 (45%), Gaps = 23/219 (10%)
Query: 431 TIASLQQYTNSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTV-SQRQTDEEFLELA 489
T L++Y N G+ +G++ + Y A L +A+KKLS +Q + EL
Sbjct: 19 TFTVLKRYQNLKPIGSG-AQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELV 75
Query: 490 STISRLRHGNIVELIGYCN-----EHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIR 544
+ + H NI+ L+ E Q + + + L ++ E H++ S+ +
Sbjct: 76 -LMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM-ELDHERMSYLL- 132
Query: 545 IRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELS 604
+ L ++ + I+H + K SNI++ +++ D GLA +G++ ++
Sbjct: 133 -------YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMT 183
Query: 605 EGLLTAHGSGAPEFESG-SYSCQSDVYSLGVVMLELLTG 642
++T + APE G Y D++S+G +M E++ G
Sbjct: 184 PYVVTRYYR-APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 35.8 bits (81), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 102/251 (40%), Gaps = 55/251 (21%)
Query: 435 LQQYTNSFSEGNFIGEGLLGSVYKA-ELPGGKLLAVKKLSNTVSQRQTDEEFLELASTIS 493
L+ + +S G +G G G V + ++ GK A+KK+ + + + +++
Sbjct: 2 LETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKNRELDIMKV----- 56
Query: 494 RLRHGNIVELIGY---------------------------CNEHGQHLLV---------- 516
L H NI++L+ Y N H + ++V
Sbjct: 57 -LDHVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNV 115
Query: 517 -YDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSN 575
+Y + TLH +L S + + N+ RA+ ++ + I H + K N
Sbjct: 116 IMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLG---ICHRDIKPQN 171
Query: 576 ILLDEKL-IVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFESGS--YSCQSDVYSL 632
+L++ K +++ D G A L +E S + + APE G+ Y+ D++S+
Sbjct: 172 LLVNSKDNTLKLCDFGSAKKLIP---SEPSVAXICSRFYRAPELMLGATEYTPSIDLWSI 228
Query: 633 GVVMLELLTGR 643
G V EL+ G+
Sbjct: 229 GCVFGELILGK 239
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 35.8 bits (81), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 95/219 (43%), Gaps = 23/219 (10%)
Query: 431 TIASLQQYTNSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTV-SQRQTDEEFLELA 489
T L++Y N G+ +G++ + Y A L +A+KKLS +Q + EL
Sbjct: 21 TFTVLKRYQNLKPIGSG-AQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELV 77
Query: 490 STISRLRHGNIVELIGYCN-----EHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIR 544
+ + H NI+ L+ E Q + + + L ++ E H++ S+ +
Sbjct: 78 -LMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM-ELDHERMSYLL- 134
Query: 545 IRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELS 604
+ L ++ + I+H + K SNI++ +++ D GLA + T+ +
Sbjct: 135 -------YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMM 184
Query: 605 EGLLTAHGSGAPEFESG-SYSCQSDVYSLGVVMLELLTG 642
+ APE G Y D++S+G +M E++ G
Sbjct: 185 VPFVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 16/92 (17%)
Query: 566 IVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEF------E 619
+++ + K N+L+D++ ++V+D G A + G T L G PE+
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXL---------CGTPEYLAPEIIL 211
Query: 620 SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRP 651
S Y+ D ++LGV++ E+ G P+ P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADEP 243
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 83/202 (41%), Gaps = 17/202 (8%)
Query: 465 KLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCT 524
K++ V K T S + E+ AS L+H +IVEL+ + G +V+++
Sbjct: 57 KIVDVAKF--TSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGAD 114
Query: 525 LHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIV 584
L + +A +S + AL+Y + I+H + K +LL K
Sbjct: 115 LCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH---DNNIIHRDVKPHCVLLASK--- 168
Query: 585 RVSDCGLAPLLFSGSTNELSEGLLTAHGS-GAPEF------ESGSYSCQSDVYSLGVVML 637
+ L G +L E L A G G P F + Y DV+ GV++
Sbjct: 169 --ENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILF 226
Query: 638 ELLTGRKPYDRSRPRGEQSLVR 659
LL+G P+ ++ R + +++
Sbjct: 227 ILLSGCLPFYGTKERLFEGIIK 248
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 87/223 (39%), Gaps = 25/223 (11%)
Query: 431 TIASLQQYTNSFSEGNFIGEGLLGSVYKAELPGGKLL-AVKKLSNTVSQRQTDEEFLELA 489
T + QY ++ N IG G G V A G ++ A KK+ + + F +
Sbjct: 3 TKGDINQY---YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVE--DVDRFKQEI 57
Query: 490 STISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKK-FSWNIRIRVA 548
+ L H NI+ L ++ LV + CT +L + HK+ F + R+
Sbjct: 58 EIMKSLDHPNIIRLYETFEDNTDIYLVMEL---CTGGELF--ERVVHKRVFRESDAARIM 112
Query: 549 LGAARALQYLQEVCEPPIVHGNFKSSNILL-----DEKLIVRVSDCGLAPLLFSGSTNEL 603
A+ Y ++ + H + K N L D L ++ D GLA G
Sbjct: 113 KDVLSAVAYCHKLN---VAHRDLKPENFLFLTDSPDSPL--KLIDFGLAARFKPGKMMRT 167
Query: 604 SEGLLTAHGSGAPEFESGSYSCQSDVYSLGVVMLELLTGRKPY 646
G +P+ G Y + D +S GV+M LL G P+
Sbjct: 168 KVG---TPYYVSPQVLEGLYGPECDEWSAGVMMYVLLCGYPPF 207
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 83/202 (41%), Gaps = 17/202 (8%)
Query: 465 KLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCT 524
K++ V K T S + E+ AS L+H +IVEL+ + G +V+++
Sbjct: 55 KIVDVAKF--TSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGAD 112
Query: 525 LHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIV 584
L + +A +S + AL+Y + I+H + K +LL K
Sbjct: 113 LCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH---DNNIIHRDVKPHCVLLASK--- 166
Query: 585 RVSDCGLAPLLFSGSTNELSEGLLTAHGS-GAPEF------ESGSYSCQSDVYSLGVVML 637
+ L G +L E L A G G P F + Y DV+ GV++
Sbjct: 167 --ENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILF 224
Query: 638 ELLTGRKPYDRSRPRGEQSLVR 659
LL+G P+ ++ R + +++
Sbjct: 225 ILLSGCLPFYGTKERLFEGIIK 246
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 101/220 (45%), Gaps = 23/220 (10%)
Query: 431 TIASLQQYTNSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTV-SQRQTDEEFLELA 489
T L++Y N G+ +G++ + Y A L + +A+KKLS +Q + EL
Sbjct: 19 TFTVLKRYQNLKPIGSG-AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELV 75
Query: 490 STISRLRHGNIVELIGYCN-----EHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIR 544
+ + H NI+ L+ E Q + + + L ++ E H++ S+ +
Sbjct: 76 -LMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM-ELDHERMSYLL- 132
Query: 545 IRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELS 604
+ L ++ + I+H + K SNI++ +++ D GLA +G++ ++
Sbjct: 133 -------YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLART--AGTSFMMT 183
Query: 605 EGLLTAHGSGAPEFESG-SYSCQSDVYSLGVVMLELLTGR 643
++T + APE G Y D++S+G +M E++ +
Sbjct: 184 PYVVTRYYR-APEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 87/223 (39%), Gaps = 25/223 (11%)
Query: 431 TIASLQQYTNSFSEGNFIGEGLLGSVYKAELPGGKLL-AVKKLSNTVSQRQTDEEFLELA 489
T + QY ++ N IG G G V A G ++ A KK+ + + F +
Sbjct: 20 TKGDINQY---YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVE--DVDRFKQEI 74
Query: 490 STISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKK-FSWNIRIRVA 548
+ L H NI+ L ++ LV + CT +L + HK+ F + R+
Sbjct: 75 EIMKSLDHPNIIRLYETFEDNTDIYLVMEL---CTGGELF--ERVVHKRVFRESDAARIM 129
Query: 549 LGAARALQYLQEVCEPPIVHGNFKSSNILL-----DEKLIVRVSDCGLAPLLFSGSTNEL 603
A+ Y ++ + H + K N L D L ++ D GLA G
Sbjct: 130 KDVLSAVAYCHKLN---VAHRDLKPENFLFLTDSPDSPL--KLIDFGLAARFKPGKMMRT 184
Query: 604 SEGLLTAHGSGAPEFESGSYSCQSDVYSLGVVMLELLTGRKPY 646
G +P+ G Y + D +S GV+M LL G P+
Sbjct: 185 KVG---TPYYVSPQVLEGLYGPECDEWSAGVMMYVLLCGYPPF 224
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 54/114 (47%), Gaps = 17/114 (14%)
Query: 547 VALGAARALQYLQEVCEPPIVHGNFKSSNILLD---EKLIVRVSDCGLAP-LLFSGSTNE 602
V A AL +L I H + K NIL + + V++ D GL + +G +
Sbjct: 116 VVQDVASALDFLHN---KGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSP 172
Query: 603 LSE-GLLTAHGSG---APEF------ESGSYSCQSDVYSLGVVMLELLTGRKPY 646
+S LLT GS APE E+ Y + D++SLGV++ LL+G P+
Sbjct: 173 ISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPF 226
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 96/220 (43%), Gaps = 23/220 (10%)
Query: 431 TIASLQQYTNSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTV-SQRQTDEEFLELA 489
T L++Y N G+ +G++ + Y A L +A+KKLS +Q + EL
Sbjct: 19 TFTVLKRYQNLKPIGSG-AQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELV 75
Query: 490 STISRLRHGNIVELIGYCN-----EHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIR 544
+ + H NI+ L+ E Q + + + L ++ E H++ S+ +
Sbjct: 76 -LMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM-ELDHERMSYLL- 132
Query: 545 IRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELS 604
+ L ++ + I+H + K SNI++ +++ D GLA + T+ +
Sbjct: 133 -------YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMM 182
Query: 605 EGLLTAHGSGAPEFESG-SYSCQSDVYSLGVVMLELLTGR 643
E + APE G Y D++S+G +M E++ +
Sbjct: 183 EPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHK 222
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 566 IVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELS---EGLLTAHGSGAPE-FESG 621
+++ + K N+L+D++ ++V+D G A + G T L E L APE S
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXLCGTPEAL-------APEIILSK 213
Query: 622 SYSCQSDVYSLGVVMLELLTGRKPYDRSRP 651
Y+ D ++LGV++ E+ G P+ +P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 14/96 (14%)
Query: 554 ALQYLQEVCEPPIVHGNFKSSNILLD-----EKLI-VRVSDCGLAPLLFSGSTNELSEGL 607
L Y+ C I+H + K N+L++ E LI ++++D G A TN +
Sbjct: 143 GLDYMHRRC--GIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQ--- 197
Query: 608 LTAHGSGAPEFESGS-YSCQSDVYSLGVVMLELLTG 642
+PE G+ + C +D++S ++ EL+TG
Sbjct: 198 --TREYRSPEVLLGAPWGCGADIWSTACLIFELITG 231
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 14/96 (14%)
Query: 554 ALQYLQEVCEPPIVHGNFKSSNILLD-----EKLI-VRVSDCGLAPLLFSGSTNELSEGL 607
L Y+ C I+H + K N+L++ E LI ++++D G A TN +
Sbjct: 143 GLDYMHRRC--GIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQ--- 197
Query: 608 LTAHGSGAPEFESGS-YSCQSDVYSLGVVMLELLTG 642
+PE G+ + C +D++S ++ EL+TG
Sbjct: 198 --TREYRSPEVLLGAPWGCGADIWSTACLIFELITG 231
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 116/299 (38%), Gaps = 70/299 (23%)
Query: 430 FTIASLQQYTNSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELA 489
F SL + + IG+G G V A + + K+ N RQ + + +E
Sbjct: 16 FQGGSLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERI 75
Query: 490 ST----ISRLRHGNIVELIG-YCNE----------HGQHLL------VYDYGGNCTLHDL 528
T + +L H NI L Y +E HG HLL + D G C + D+
Sbjct: 76 KTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAM-DV 134
Query: 529 LHS--------DEEA--------HKKFSWNIRIRVALGAAR----ALQYLQEVCEPPIVH 568
+ + +EEA + + R ++ R AL YL I H
Sbjct: 135 VKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHN---QGICH 191
Query: 569 GNFKSSNILL--DEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG---APEF---ES 620
+ K N L ++ +++ D GL+ + + E G+ T G+ APE +
Sbjct: 192 RDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYY-GMTTKAGTPYFVAPEVLNTTN 250
Query: 621 GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSL 679
SY + D +S GV++ LL G P+ P ++D D +S++++ L
Sbjct: 251 ESYGPKCDAWSAGVLLHLLLMGAVPF----------------PGVNDADTISQVLNKKL 293
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 45/92 (48%), Gaps = 16/92 (17%)
Query: 566 IVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEF------E 619
+++ + K N+L+D++ ++V+D G A + G T L G PE+
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXL---------CGTPEYLAPEIIL 211
Query: 620 SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRP 651
S Y+ D ++LGV++ ++ G P+ +P
Sbjct: 212 SKGYNKAVDWWALGVLIYQMAAGYPPFFADQP 243
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 101/220 (45%), Gaps = 23/220 (10%)
Query: 431 TIASLQQYTNSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTV-SQRQTDEEFLELA 489
T L++Y N G+ +G++ + Y A L + +A+KKLS +Q + EL
Sbjct: 13 TFTVLKRYQNLKPIGSG-AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELV 69
Query: 490 STISRLRHGNIVELIGYCN-----EHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIR 544
+ + H NI+ L+ E Q + + + L ++ E H++ S+ +
Sbjct: 70 -LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM-ELDHERMSYLL- 126
Query: 545 IRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELS 604
+ L ++ + I+H + K SNI++ +++ D GLA +G++ ++
Sbjct: 127 -------YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMT 177
Query: 605 EGLLTAHGSGAPEFESG-SYSCQSDVYSLGVVMLELLTGR 643
++T + APE G Y D++S+G +M E++ +
Sbjct: 178 PYVVTRYYR-APEVILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 101/220 (45%), Gaps = 23/220 (10%)
Query: 431 TIASLQQYTNSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTV-SQRQTDEEFLELA 489
T L++Y N G+ +G++ + Y A L + +A+KKLS +Q + EL
Sbjct: 12 TFTVLKRYQNLKPIGSG-AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELV 68
Query: 490 STISRLRHGNIVELIGYCN-----EHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIR 544
+ + H NI+ L+ E Q + + + L ++ E H++ S+ +
Sbjct: 69 -LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM-ELDHERMSYLL- 125
Query: 545 IRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELS 604
+ L ++ + I+H + K SNI++ +++ D GLA +G++ ++
Sbjct: 126 -------YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMT 176
Query: 605 EGLLTAHGSGAPEFESG-SYSCQSDVYSLGVVMLELLTGR 643
++T + APE G Y D++S+G +M E++ +
Sbjct: 177 PYVVTRYYR-APEVILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 101/220 (45%), Gaps = 23/220 (10%)
Query: 431 TIASLQQYTNSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTV-SQRQTDEEFLELA 489
T L++Y N G+ +G++ + Y A L + +A+KKLS +Q + EL
Sbjct: 20 TFTVLKRYQNLKPIGSG-AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELV 76
Query: 490 STISRLRHGNIVELIGYCN-----EHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIR 544
+ + H NI+ L+ E Q + + + L ++ E H++ S+ +
Sbjct: 77 -LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM-ELDHERMSYLL- 133
Query: 545 IRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELS 604
+ L ++ + I+H + K SNI++ +++ D GLA +G++ ++
Sbjct: 134 -------YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMT 184
Query: 605 EGLLTAHGSGAPEFESG-SYSCQSDVYSLGVVMLELLTGR 643
++T + APE G Y D++S+G +M E++ +
Sbjct: 185 PYVVTRYYR-APEVILGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 101/220 (45%), Gaps = 23/220 (10%)
Query: 431 TIASLQQYTNSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTV-SQRQTDEEFLELA 489
T L++Y N G+ +G++ + Y A L + +A+KKLS +Q + EL
Sbjct: 13 TFTVLKRYQNLKPIGSG-AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELV 69
Query: 490 STISRLRHGNIVELIGYCN-----EHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIR 544
+ + H NI+ L+ E Q + + + L ++ E H++ S+ +
Sbjct: 70 -LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM-ELDHERMSYLL- 126
Query: 545 IRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELS 604
+ L ++ + I+H + K SNI++ +++ D GLA +G++ ++
Sbjct: 127 -------YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMT 177
Query: 605 EGLLTAHGSGAPEFESG-SYSCQSDVYSLGVVMLELLTGR 643
++T + APE G Y D++S+G +M E++ +
Sbjct: 178 PYVVTRYYR-APEVILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 101/220 (45%), Gaps = 23/220 (10%)
Query: 431 TIASLQQYTNSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTV-SQRQTDEEFLELA 489
T L++Y N G+ +G++ + Y A L + +A+KKLS +Q + EL
Sbjct: 18 TFTVLKRYQNLKPIGSG-AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELV 74
Query: 490 STISRLRHGNIVELIGYCN-----EHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIR 544
+ + H NI+ L+ E Q + + + L ++ E H++ S+ +
Sbjct: 75 -LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM-ELDHERMSYLL- 131
Query: 545 IRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELS 604
+ L ++ + I+H + K SNI++ +++ D GLA +G++ ++
Sbjct: 132 -------YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMT 182
Query: 605 EGLLTAHGSGAPEFESG-SYSCQSDVYSLGVVMLELLTGR 643
++T + APE G Y D++S+G +M E++ +
Sbjct: 183 PYVVTRYYR-APEVILGMGYKENVDIWSVGCIMGEMVRHK 221
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 101/220 (45%), Gaps = 23/220 (10%)
Query: 431 TIASLQQYTNSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTV-SQRQTDEEFLELA 489
T L++Y N G+ +G++ + Y A L + +A+KKLS +Q + EL
Sbjct: 19 TFTVLKRYQNLKPIGSG-AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELV 75
Query: 490 STISRLRHGNIVELIGYCN-----EHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIR 544
+ + H NI+ L+ E Q + + + L ++ E H++ S+ +
Sbjct: 76 -LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM-ELDHERMSYLL- 132
Query: 545 IRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELS 604
+ L ++ + I+H + K SNI++ +++ D GLA +G++ ++
Sbjct: 133 -------YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMT 183
Query: 605 EGLLTAHGSGAPEFESG-SYSCQSDVYSLGVVMLELLTGR 643
++T + APE G Y D++S+G +M E++ +
Sbjct: 184 PYVVTRYYR-APEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 101/220 (45%), Gaps = 23/220 (10%)
Query: 431 TIASLQQYTNSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTV-SQRQTDEEFLELA 489
T L++Y N G+ +G++ + Y A L + +A+KKLS +Q + EL
Sbjct: 20 TFTVLKRYQNLKPIGSG-AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELV 76
Query: 490 STISRLRHGNIVELIGYCN-----EHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIR 544
+ + H NI+ L+ E Q + + + L ++ E H++ S+ +
Sbjct: 77 -LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM-ELDHERMSYLL- 133
Query: 545 IRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELS 604
+ L ++ + I+H + K SNI++ +++ D GLA +G++ ++
Sbjct: 134 -------YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMT 184
Query: 605 EGLLTAHGSGAPEFESG-SYSCQSDVYSLGVVMLELLTGR 643
++T + APE G Y D++S+G +M E++ +
Sbjct: 185 PYVVTRYYR-APEVILGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 53/283 (18%), Positives = 116/283 (40%), Gaps = 44/283 (15%)
Query: 448 IGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRH--GNIVELIG 505
IG G V++ ++ A+K ++ + QT + + + +++L+ I+ L
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 506 YCNEHGQHLLVYDYGGNCTLHDLLHSDEEA---HKKFSWNIRIRVALGAARALQYLQEVC 562
Y Q++ + GN L+ L + +K W L+ + +
Sbjct: 124 Y-EITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWK----------NMLEAVHTIH 172
Query: 563 EPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFESGS 622
+ IVH + K +N L+ + ++ ++ D G+A + +T+ + + + A PE
Sbjct: 173 QHGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDM 231
Query: 623 YSCQS------------DVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDA 670
S + DV+SLG ++ + G+ P+ Q ++ I +LH I
Sbjct: 232 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF--------QQIIN-QISKLHAI-- 280
Query: 671 LSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIV 713
+DP+ + + D++ C++ +P R + E++
Sbjct: 281 ----IDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 319
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 101/220 (45%), Gaps = 23/220 (10%)
Query: 431 TIASLQQYTNSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTV-SQRQTDEEFLELA 489
T L++Y N G+ +G++ + Y A L + +A+KKLS +Q + EL
Sbjct: 19 TFTVLKRYQNLKPIGSG-AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELV 75
Query: 490 STISRLRHGNIVELIGYCN-----EHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIR 544
+ + H NI+ L+ E Q + + + L ++ E H++ S+ +
Sbjct: 76 -LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM-ELDHERMSYLL- 132
Query: 545 IRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELS 604
+ L ++ + I+H + K SNI++ +++ D GLA +G++ ++
Sbjct: 133 -------YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMT 183
Query: 605 EGLLTAHGSGAPEFESG-SYSCQSDVYSLGVVMLELLTGR 643
++T + APE G Y D++S+G +M E++ +
Sbjct: 184 PYVVTRYYR-APEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 34.3 bits (77), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 101/220 (45%), Gaps = 23/220 (10%)
Query: 431 TIASLQQYTNSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTV-SQRQTDEEFLELA 489
T L++Y N G+ +G++ + Y A L + +A+KKLS +Q + EL
Sbjct: 57 TFTVLKRYQNLKPIGSG-AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELV 113
Query: 490 STISRLRHGNIVELIGYCN-----EHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIR 544
+ + H NI+ L+ E Q + + + L ++ E H++ S+ +
Sbjct: 114 -LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM-ELDHERMSYLL- 170
Query: 545 IRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELS 604
+ L ++ + I+H + K SNI++ +++ D GLA +G++ ++
Sbjct: 171 -------YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMT 221
Query: 605 EGLLTAHGSGAPEFESG-SYSCQSDVYSLGVVMLELLTGR 643
++T + APE G Y D++S+G +M E++ +
Sbjct: 222 PYVVTRYYR-APEVILGMGYKENVDIWSVGCIMGEMVRHK 260
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 34.3 bits (77), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 52/283 (18%), Positives = 115/283 (40%), Gaps = 44/283 (15%)
Query: 448 IGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRH--GNIVELIG 505
IG G V++ ++ A+K ++ + QT + + + +++L+ I+ L
Sbjct: 20 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 79
Query: 506 YCNEHGQHLLVYDYGGNCTLHDLLHSDEEA---HKKFSWNIRIRVALGAARALQYLQEVC 562
Y Q++ + GN L+ L + +K W L+ + +
Sbjct: 80 Y-EITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWK----------NMLEAVHTIH 128
Query: 563 EPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFESGS 622
+ IVH + K +N L+ + ++ ++ D G+A + +T+ + + + PE
Sbjct: 129 QHGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDM 187
Query: 623 YSCQS------------DVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDA 670
S + DV+SLG ++ + G+ P+ Q ++ I +LH I
Sbjct: 188 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF--------QQIIN-QISKLHAI-- 236
Query: 671 LSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIV 713
+DP+ + + D++ C++ +P R + E++
Sbjct: 237 ----IDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 275
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 101/220 (45%), Gaps = 23/220 (10%)
Query: 431 TIASLQQYTNSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTV-SQRQTDEEFLELA 489
T L++Y N G+ +G++ + Y A L + +A+KKLS +Q + EL
Sbjct: 57 TFTVLKRYQNLKPIGSG-AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELV 113
Query: 490 STISRLRHGNIVELIGYCN-----EHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIR 544
+ + H NI+ L+ E Q + + + L ++ E H++ S+ +
Sbjct: 114 -LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM-ELDHERMSYLL- 170
Query: 545 IRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELS 604
+ L ++ + I+H + K SNI++ +++ D GLA +G++ ++
Sbjct: 171 -------YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMT 221
Query: 605 EGLLTAHGSGAPEFESG-SYSCQSDVYSLGVVMLELLTGR 643
++T + APE G Y D++S+G +M E++ +
Sbjct: 222 PYVVTRYYR-APEVILGMGYKENVDIWSVGCIMGEMVRHK 260
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 99/223 (44%), Gaps = 27/223 (12%)
Query: 448 IGEGLLGSVYKAELPG-GKLLAVKKLSNTVSQRQTDEEFLELASTISRLR-HGNIVELIG 505
+ EG VY+A+ G G+ A+K+L + ++ + + ++ + +L H NIV+
Sbjct: 36 LAEGGFAFVYEAQDVGSGREYALKRLLS--NEEEKNRAIIQEVCFMKKLSGHPNIVQFCS 93
Query: 506 YCN------EHGQ-HLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYL 558
+ + GQ L+ L + L E+ S + +++ RA+Q++
Sbjct: 94 AASIGKEESDTGQAEFLLLTELCKGQLVEFL-KKMESRGPLSCDTVLKIFYQTCRAVQHM 152
Query: 559 QEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLL-------FSGSTNELSEGLLTAH 611
+PPI+H + K N+LL + +++ D G A + +S L E +T +
Sbjct: 153 HRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRN 211
Query: 612 GS---GAPE----FESGSYSCQSDVYSLGVVMLELLTGRKPYD 647
+ PE + + + D+++LG ++ L + P++
Sbjct: 212 TTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFE 254
>pdb|2JII|A Chain A, Structure Of Vaccinia Related Kinase 3
pdb|2JII|B Chain B, Structure Of Vaccinia Related Kinase 3
Length = 352
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 49/114 (42%), Gaps = 12/114 (10%)
Query: 551 AARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLF----SGSTNELSEG 606
A R L L+ + E VHGN + NI +D + +V+ G F SG EG
Sbjct: 165 ACRLLDALEFLHENEYVHGNVTAENIFVDPEDQSQVTLAGYG-FAFRYCPSGKHVAYVEG 223
Query: 607 LLTAHGSGAPEFESGSY------SCQSDVYSLGVVMLELLTGRKPYDRSRPRGE 654
+ H G EF S S +SD+ SLG ML+ L G P+ P E
Sbjct: 224 SRSPH-EGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNTE 276
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 96/220 (43%), Gaps = 23/220 (10%)
Query: 431 TIASLQQYTNSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTV-SQRQTDEEFLELA 489
T L++Y N G+ +G++ + Y A L +A+KKLS +Q + EL
Sbjct: 19 TFTVLKRYQNLKPIGSG-AQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELV 75
Query: 490 STISRLRHGNIVELIGYCN-----EHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIR 544
+ + H NI+ L+ E Q + + + L ++ E H++ S+ +
Sbjct: 76 -LMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM-ELDHERMSYLL- 132
Query: 545 IRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELS 604
+ L ++ + I+H + K SNI++ +++ D GLA + T+ +
Sbjct: 133 -------YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMM 182
Query: 605 EGLLTAHGSGAPEFESG-SYSCQSDVYSLGVVMLELLTGR 643
E + APE G Y D++S+G +M E++ +
Sbjct: 183 EPEVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 222
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 33.9 bits (76), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 44/95 (46%), Gaps = 8/95 (8%)
Query: 551 AARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSE--GLL 608
A LQ L + + I+H + K NILL ++ G+ + F S E +
Sbjct: 206 AHSILQCLDALHKNRIIHCDLKPENILLKQQ-----GRSGIKVIDFGSSCYEHQRVYXXI 260
Query: 609 TAHGSGAPEFESGS-YSCQSDVYSLGVVMLELLTG 642
+ APE G+ Y D++SLG ++ ELLTG
Sbjct: 261 QSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 33.9 bits (76), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 52/283 (18%), Positives = 115/283 (40%), Gaps = 44/283 (15%)
Query: 448 IGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRH--GNIVELIG 505
IG G V++ ++ A+K ++ + QT + + + +++L+ I+ L
Sbjct: 16 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 75
Query: 506 YCNEHGQHLLVYDYGGNCTLHDLLHSDEEA---HKKFSWNIRIRVALGAARALQYLQEVC 562
Y Q++ + GN L+ L + +K W L+ + +
Sbjct: 76 Y-EITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWK----------NMLEAVHTIH 124
Query: 563 EPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFESGS 622
+ IVH + K +N L+ + ++ ++ D G+A + +T+ + + + PE
Sbjct: 125 QHGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDM 183
Query: 623 YSCQS------------DVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDA 670
S + DV+SLG ++ + G+ P+ Q ++ I +LH I
Sbjct: 184 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF--------QQIIN-QISKLHAI-- 232
Query: 671 LSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIV 713
+DP+ + + D++ C++ +P R + E++
Sbjct: 233 ----IDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 271
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 44/95 (46%), Gaps = 8/95 (8%)
Query: 551 AARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSE--GLL 608
A LQ L + + I+H + K NILL ++ G+ + F S E +
Sbjct: 206 AHSILQCLDALHKNRIIHCDLKPENILLKQQ-----GRSGIKVIDFGSSCYEHQRVYTXI 260
Query: 609 TAHGSGAPEFESGS-YSCQSDVYSLGVVMLELLTG 642
+ APE G+ Y D++SLG ++ ELLTG
Sbjct: 261 QSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 52/283 (18%), Positives = 115/283 (40%), Gaps = 44/283 (15%)
Query: 448 IGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRH--GNIVELIG 505
IG G V++ ++ A+K ++ + QT + + + +++L+ I+ L
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 95
Query: 506 YCNEHGQHLLVYDYGGNCTLHDLLHSDEEA---HKKFSWNIRIRVALGAARALQYLQEVC 562
Y Q++ + GN L+ L + +K W L+ + +
Sbjct: 96 Y-EITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWK----------NMLEAVHTIH 144
Query: 563 EPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFESGS 622
+ IVH + K +N L+ + ++ ++ D G+A + +T+ + + + PE
Sbjct: 145 QHGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDM 203
Query: 623 YSCQS------------DVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDA 670
S + DV+SLG ++ + G+ P+ Q ++ I +LH I
Sbjct: 204 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF--------QQIIN-QISKLHAI-- 252
Query: 671 LSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIV 713
+DP+ + + D++ C++ +P R + E++
Sbjct: 253 ----IDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 291
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 52/283 (18%), Positives = 115/283 (40%), Gaps = 44/283 (15%)
Query: 448 IGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRH--GNIVELIG 505
IG G V++ ++ A+K ++ + QT + + + +++L+ I+ L
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 506 YCNEHGQHLLVYDYGGNCTLHDLLHSDEEA---HKKFSWNIRIRVALGAARALQYLQEVC 562
Y Q++ + GN L+ L + +K W L+ + +
Sbjct: 124 Y-EITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWK----------NMLEAVHTIH 172
Query: 563 EPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFESGS 622
+ IVH + K +N L+ + ++ ++ D G+A + +T+ + + + PE
Sbjct: 173 QHGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDM 231
Query: 623 YSCQS------------DVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDA 670
S + DV+SLG ++ + G+ P+ Q ++ I +LH I
Sbjct: 232 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF--------QQIIN-QISKLHAI-- 280
Query: 671 LSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIV 713
+DP+ + + D++ C++ +P R + E++
Sbjct: 281 ----IDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 319
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 90/228 (39%), Gaps = 26/228 (11%)
Query: 432 IASLQQYTNSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQT----DEEFL- 486
IA L + ++ FI G G+V G +A+K++ NTVS +T + FL
Sbjct: 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLC 73
Query: 487 -ELASTISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRI 545
+ I L H + ++G + ++ + +H L E + I
Sbjct: 74 KRVLREIRLLNHFHHPNILGLRD-------IFVHFEEPAMHKLYLVTELMRTDLAQVIHD 126
Query: 546 RVALGAARALQY--------LQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS 597
+ + + + +QY L + E +VH + NILL + + + D LA
Sbjct: 127 QRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAR---E 183
Query: 598 GSTNELSEGLLTAHGSGAPEF--ESGSYSCQSDVYSLGVVMLELLTGR 643
+ + +T APE + ++ D++S G VM E+ +
Sbjct: 184 DTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRK 231
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 90/228 (39%), Gaps = 26/228 (11%)
Query: 432 IASLQQYTNSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQT----DEEFL- 486
IA L + ++ FI G G+V G +A+K++ NTVS +T + FL
Sbjct: 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLC 73
Query: 487 -ELASTISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRI 545
+ I L H + ++G + ++ + +H L E + I
Sbjct: 74 KRVLREIRLLNHFHHPNILGLRD-------IFVHFEEPAMHKLYLVTELMRTDLAQVIHD 126
Query: 546 RVALGAARALQY--------LQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS 597
+ + + + +QY L + E +VH + NILL + + + D LA
Sbjct: 127 QRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAR---E 183
Query: 598 GSTNELSEGLLTAHGSGAPEF--ESGSYSCQSDVYSLGVVMLELLTGR 643
+ + +T APE + ++ D++S G VM E+ +
Sbjct: 184 DTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRK 231
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 44/95 (46%), Gaps = 8/95 (8%)
Query: 551 AARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSE--GLL 608
A LQ L + + I+H + K NILL ++ G+ + F S E +
Sbjct: 206 AHSILQCLDALHKNRIIHCDLKPENILLKQQ-----GRSGIKVIDFGSSCYEHQRVYTXI 260
Query: 609 TAHGSGAPEFESGS-YSCQSDVYSLGVVMLELLTG 642
+ APE G+ Y D++SLG ++ ELLTG
Sbjct: 261 QSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 32.7 bits (73), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 100/220 (45%), Gaps = 23/220 (10%)
Query: 431 TIASLQQYTNSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTV-SQRQTDEEFLELA 489
T L++Y N G+ +G++ + Y A L +A+KKLS +Q + EL
Sbjct: 24 TFTVLKRYQNLKPIGSG-AQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELV 80
Query: 490 STISRLRHGNIVELIGYCN-----EHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIR 544
+ + H NI+ L+ E Q + + + L ++ E H++ S+ +
Sbjct: 81 -LMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM-ELDHERMSYLL- 137
Query: 545 IRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELS 604
+ L ++ + I+H + K SNI++ +++ D GLA +G++ ++
Sbjct: 138 -------YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMT 188
Query: 605 EGLLTAHGSGAPEFESG-SYSCQSDVYSLGVVMLELLTGR 643
++T + APE G Y D++S+G +M E++ +
Sbjct: 189 PYVVTRYYR-APEVILGMGYKENVDLWSVGCIMGEMVCHK 227
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 32.7 bits (73), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 100/220 (45%), Gaps = 23/220 (10%)
Query: 431 TIASLQQYTNSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTV-SQRQTDEEFLELA 489
T L++Y N G+ +G++ + Y A L +A+KKLS +Q + EL
Sbjct: 13 TFTVLKRYQNLKPIGSG-AQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELV 69
Query: 490 STISRLRHGNIVELIGYCN-----EHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIR 544
+ + H NI+ L+ E Q + + + L ++ E H++ S+ +
Sbjct: 70 -LMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM-ELDHERMSYLL- 126
Query: 545 IRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELS 604
+ L ++ + I+H + K SNI++ +++ D GLA +G++ ++
Sbjct: 127 -------YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMT 177
Query: 605 EGLLTAHGSGAPEFESG-SYSCQSDVYSLGVVMLELLTGR 643
++T + APE G Y D++S+G +M E++ +
Sbjct: 178 PYVVTRYYR-APEVILGMGYKENVDLWSVGCIMGEMVCHK 216
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 32.7 bits (73), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 52/283 (18%), Positives = 115/283 (40%), Gaps = 44/283 (15%)
Query: 448 IGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRH--GNIVELIG 505
IG G V++ ++ A+K ++ + QT + + + +++L+ I+ L
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 506 YCNEHGQHLLVYDYGGNCTLHDLLHSDEEA---HKKFSWNIRIRVALGAARALQYLQEVC 562
Y Q++ + GN L+ L + +K W L+ + +
Sbjct: 124 Y-EITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWK----------NMLEAVHTIH 172
Query: 563 EPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFESGS 622
+ IVH + K +N L+ + ++ ++ D G+A + +T+ + + + PE
Sbjct: 173 QHGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDM 231
Query: 623 YSCQS------------DVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDA 670
S + DV+SLG ++ + G+ P+ Q ++ I +LH I
Sbjct: 232 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF--------QQIIN-QISKLHAI-- 280
Query: 671 LSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIV 713
+DP+ + + D++ C++ +P R + E++
Sbjct: 281 ----IDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 319
>pdb|1W8A|A Chain A, Third Lrr Domain Of Drosophila Slit
Length = 192
Score = 32.7 bits (73), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 41/93 (44%), Gaps = 5/93 (5%)
Query: 161 FHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLSGTLN-VLEDLH-LIDLNI 218
F + L+ +L N LTG P + S + L L NK+ N + LH L LN+
Sbjct: 50 FGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNL 109
Query: 219 ENNLFSGPIP---EKLLSIPNFRKDGNPFNTTV 248
+N S +P E L S+ + NPFN
Sbjct: 110 YDNQISCVMPGSFEHLNSLTSLNLASNPFNCNC 142
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 32.7 bits (73), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 52/283 (18%), Positives = 115/283 (40%), Gaps = 44/283 (15%)
Query: 448 IGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRH--GNIVELIG 505
IG G V++ ++ A+K ++ + QT + + + +++L+ I+ L
Sbjct: 17 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 76
Query: 506 YCNEHGQHLLVYDYGGNCTLHDLLHSDEEA---HKKFSWNIRIRVALGAARALQYLQEVC 562
Y Q++ + GN L+ L + +K W L+ + +
Sbjct: 77 Y-EITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYW----------KNMLEAVHTIH 125
Query: 563 EPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFESGS 622
+ IVH + K +N L+ + ++ ++ D G+A + +T+ + + + PE
Sbjct: 126 QHGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDM 184
Query: 623 YSCQS------------DVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDA 670
S + DV+SLG ++ + G+ P+ Q ++ I +LH I
Sbjct: 185 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF--------QQIIN-QISKLHAI-- 233
Query: 671 LSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIV 713
+DP+ + + D++ C++ +P R + E++
Sbjct: 234 ----IDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 272
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 32.3 bits (72), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 97/237 (40%), Gaps = 37/237 (15%)
Query: 440 NSFSEGNFIGEGLLGSVYKA-ELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHG 498
+++ + IG G G VY A + K +A+KK++ + L + ++RL+
Sbjct: 28 DNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSD 87
Query: 499 NIVELIGYCNEHGQHLLVYDYGGNCTLHDLLH-SDEEAHKKFSWNIRI---RVALGAARA 554
I+ L + LL +D L+ +L +D + K F I + V
Sbjct: 88 YIIRLHDLII--PEDLLKFD-----ELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYNL 140
Query: 555 LQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS----------------- 597
L + + E I+H + K +N LL++ V++ D GLA + S
Sbjct: 141 LLGEKFIHESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENE 200
Query: 598 --GSTNELSEGLLTAHGSG----APE--FESGSYSCQSDVYSLGVVMLELLTGRKPY 646
G N+ + LT+H APE +Y+ D++S G + ELL K +
Sbjct: 201 EPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMKSH 257
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 32.3 bits (72), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 53/114 (46%), Gaps = 17/114 (14%)
Query: 547 VALGAARALQYLQEVCEPPIVHGNFKSSNILLD---EKLIVRVSDCGLAP-LLFSGSTNE 602
V A AL +L I H + K NIL + + V++ D L + +G +
Sbjct: 116 VVQDVASALDFLHN---KGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSP 172
Query: 603 LSE-GLLTAHGSG---APEF------ESGSYSCQSDVYSLGVVMLELLTGRKPY 646
+S LLT GS APE E+ Y + D++SLGV++ LL+G P+
Sbjct: 173 ISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPF 226
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 32.3 bits (72), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 6/84 (7%)
Query: 566 IVHGNFKSSNILLDEK---LIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFESGS 622
I H + K N+L K +++++D G A + N L T +
Sbjct: 130 IAHRDVKPENLLYTSKEKDAVLKLTDFGFAK---ETTQNALQTPCYTPYYVAPEVLGPEK 186
Query: 623 YSCQSDVYSLGVVMLELLTGRKPY 646
Y D++SLGV+M LL G P+
Sbjct: 187 YDKSCDMWSLGVIMYILLCGFPPF 210
>pdb|4GLP|A Chain A, The Crystal Structure Of Soluble Human Cd14 Reveals A Bent
Solenoid With A Hydrophobic Amino-terminal Pocket
Length = 310
Score = 32.3 bits (72), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
Query: 169 NFDLSANNLTGQLPPSTRNL---SSLYSLHLQNNKLSGTLNVL-EDLHLIDLNIENNLFS 224
+ DLS N+L + PS S+L SL+L L L L ++DL+ N L
Sbjct: 228 SLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLEQVPKGLPAKLRVLDLS-SNRLNR 286
Query: 225 GPIPEKLLSIPNFRKDGNPF 244
P P++L + N DGNPF
Sbjct: 287 APQPDELPEVDNLTLDGNPF 306
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 6/84 (7%)
Query: 566 IVHGNFKSSNILLDEK---LIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFESGS 622
I H + K N+L K +++++D G A + N L T +
Sbjct: 149 IAHRDVKPENLLYTSKEKDAVLKLTDFGFAK---ETTQNALQTPCYTPYYVAPEVLGPEK 205
Query: 623 YSCQSDVYSLGVVMLELLTGRKPY 646
Y D++SLGV+M LL G P+
Sbjct: 206 YDKSCDMWSLGVIMYILLCGFPPF 229
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 88/210 (41%), Gaps = 30/210 (14%)
Query: 448 IGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRL-RHGNIVELIGY 506
+G G G V++ K + K V + TD+ ++ +I + RH NI+ L
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYMAKF---VKVKGTDQVLVKKEISILNIARHRNILHLHES 69
Query: 507 CNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEP-- 564
+ ++++++ + + +++ F N R + Y+ +VCE
Sbjct: 70 FESMEELVMIFEFISGLDIFERINTS-----AFELNER--------EIVSYVHQVCEALQ 116
Query: 565 -----PIVHGNFKSSNILLDEKL--IVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPE 617
I H + + NI+ + +++ + G A L G L L TA APE
Sbjct: 117 FLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRL---LFTAPEYYAPE 173
Query: 618 F-ESGSYSCQSDVYSLGVVMLELLTGRKPY 646
+ S +D++SLG ++ LL+G P+
Sbjct: 174 VHQHDVVSTATDMWSLGTLVYVLLSGINPF 203
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
Query: 566 IVHGNFKSSNILLD-EKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEF--ESGS 622
I+H + K N+++D ++ +R+ D GLA F E + + + + G PE +
Sbjct: 153 IMHRDVKPHNVMIDHQQKKLRLIDWGLAE--FYHPAQEYNVRVASRYFKG-PELLVDYQM 209
Query: 623 YSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWA 661
Y D++SLG ++ ++ R+P+ + +Q LVR A
Sbjct: 210 YDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQ-LVRIA 247
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
Query: 566 IVHGNFKSSNILLD-EKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEF--ESGS 622
I+H + K N+++D ++ +R+ D GLA F E + + + + G PE +
Sbjct: 158 IMHRDVKPHNVMIDHQQKKLRLIDWGLAE--FYHPAQEYNVRVASRYFKG-PELLVDYQM 214
Query: 623 YSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWA 661
Y D++SLG ++ ++ R+P+ + +Q LVR A
Sbjct: 215 YDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQ-LVRIA 252
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 5/85 (5%)
Query: 566 IVHGNFKSSNIL-LDEK---LIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFESG 621
+VH + K SNIL +DE +R+ D G A L L TA+ +
Sbjct: 142 VVHRDLKPSNILYVDESGNPECLRICDFGFAKQL-RAENGLLMTPCYTANFVAPEVLKRQ 200
Query: 622 SYSCQSDVYSLGVVMLELLTGRKPY 646
Y D++SLG+++ +L G P+
Sbjct: 201 GYDEGCDIWSLGILLYTMLAGYTPF 225
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 93/231 (40%), Gaps = 52/231 (22%)
Query: 446 NFIGEGLLGSVYKA-ELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELI 504
+ IG G G VY A + K +A+KK++ + L + ++RL+ I+ L
Sbjct: 32 HLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLY 91
Query: 505 GYCNEHGQHLLVYDYGGNCTLHDLLHSDE--------EAHKKFSWNIRIRVALGAARALQ 556
L++ D DLL DE ++ K + I + + +
Sbjct: 92 D--------LIIPD--------DLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTIL 135
Query: 557 Y---LQE--VCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGS----TNELSEG- 606
Y L E + E I+H + K +N LL++ V+V D GLA + S N+L E
Sbjct: 136 YNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENE 195
Query: 607 -----------LLTAHGSG----APE--FESGSYSCQSDVYSLGVVMLELL 640
LT+H APE +Y+ D++S G + ELL
Sbjct: 196 EPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELL 246
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 5/85 (5%)
Query: 566 IVHGNFKSSNIL-LDEK---LIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFESG 621
+VH + K SNIL +DE +R+ D G A L L TA+ +
Sbjct: 142 VVHRDLKPSNILYVDESGNPECLRICDFGFAKQL-RAENGLLMTPCYTANFVAPEVLKRQ 200
Query: 622 SYSCQSDVYSLGVVMLELLTGRKPY 646
Y D++SLG+++ +L G P+
Sbjct: 201 GYDEGCDIWSLGILLYTMLAGYTPF 225
>pdb|2W1Z|A Chain A, Rop2 From Toxoplasma Gondii: A Virulence Factor With A
Protein-Kinase Fold And No Enzymatic Activity.
pdb|2W1Z|B Chain B, Rop2 From Toxoplasma Gondii: A Virulence Factor With A
Protein-Kinase Fold And No Enzymatic Activity
Length = 368
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 525 LHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEK 581
L D+L S HK + R+++ L R LQ +VH +F+ NILLD++
Sbjct: 174 LGDVLLSHSSTHKSLVHHARLQLTLQLIRLAASLQHYG---LVHADFQVRNILLDQR 227
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 51/283 (18%), Positives = 112/283 (39%), Gaps = 44/283 (15%)
Query: 448 IGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRH--GNIVELIG 505
IG G V++ ++ A+K ++ + QT + + + +++L+ I+ L
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 95
Query: 506 YCNEHGQHLLVYDYGGNCTLHDLLHSDEEA---HKKFSWNIRIRVALGAARALQYLQEVC 562
Y Q++ + GN L+ L + +K W L+ + +
Sbjct: 96 Y-EITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWK----------NMLEAVHTIH 144
Query: 563 EPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFESGS 622
+ IVH + K +N L+ + ++ ++ D G+A + + + + PE
Sbjct: 145 QHGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKDM 203
Query: 623 YSCQS------------DVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDA 670
S + DV+SLG ++ + G+ P+ Q ++ I +LH I
Sbjct: 204 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF--------QQIIN-QISKLHAI-- 252
Query: 671 LSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIV 713
+DP+ + + D++ C++ +P R + E++
Sbjct: 253 ----IDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 291
>pdb|2V9T|B Chain B, Complex Between The Second Lrr Domain Of Slit2 And The
First Ig Domain From Robo1
Length = 220
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 37/92 (40%), Gaps = 24/92 (26%)
Query: 111 IPSNLPVTVRNFSLSGNQLTGSIPEXXXXXXXXXXXXXXXXXXXGGIPDAFHQFTGLINF 170
IP+NLP T+ L N + IP P AF + L
Sbjct: 26 IPTNLPETITEIRLEQNTIK-VIP-----------------------PGAFSPYKKLRRI 61
Query: 171 DLSANNLTGQLPPSTRNLSSLYSLHLQNNKLS 202
DLS N ++ P + + L SL SL L NK++
Sbjct: 62 DLSNNQISELAPDAFQGLRSLNSLVLYGNKIT 93
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 38/96 (39%), Gaps = 29/96 (30%)
Query: 554 ALQYLQEVCEPPIVHGNFKSSNILLDEK---LIVRVSDCGLAPLLFSGSTNELSEGLLTA 610
A+QYL + I H + K N+L K I++++D G A
Sbjct: 129 AIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAK----------------- 168
Query: 611 HGSGAPEFESGSYSCQSDVYSLGVVMLELLTGRKPY 646
E Y D++SLGV+M LL G P+
Sbjct: 169 ------ETTGEKYDKSCDMWSLGVIMYILLCGYPPF 198
>pdb|2V9S|A Chain A, Second Lrr Domain Of Human Slit2
pdb|2V9S|B Chain B, Second Lrr Domain Of Human Slit2
pdb|2V9S|C Chain C, Second Lrr Domain Of Human Slit2
pdb|2V9S|D Chain D, Second Lrr Domain Of Human Slit2
Length = 220
Score = 30.4 bits (67), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 37/92 (40%), Gaps = 24/92 (26%)
Query: 111 IPSNLPVTVRNFSLSGNQLTGSIPEXXXXXXXXXXXXXXXXXXXGGIPDAFHQFTGLINF 170
IP+NLP T+ L N + IP P AF + L
Sbjct: 26 IPTNLPETITEIRLEQNTIK-VIP-----------------------PGAFSPYKKLRRI 61
Query: 171 DLSANNLTGQLPPSTRNLSSLYSLHLQNNKLS 202
DLS N ++ P + + L SL SL L NK++
Sbjct: 62 DLSNNQISELAPDAFQGLRSLNSLVLYGNKIT 93
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 30.0 bits (66), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 47/111 (42%), Gaps = 24/111 (21%)
Query: 553 RALQYLQEVCEPPIVHGNFKSSNILLDEKL------------------IVRVSDCGLAPL 594
+AL YL+++ + H + K NILLD+ I R G+ +
Sbjct: 148 KALNYLRKM---SLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLI 204
Query: 595 LFSGST--NELSEGLLTAHGSGAPE-FESGSYSCQSDVYSLGVVMLELLTG 642
F +T ++ ++ APE + + SD++S G V+ EL TG
Sbjct: 205 DFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTG 255
>pdb|2V70|A Chain A, Third Lrr Domain Of Human Slit2
pdb|2V70|B Chain B, Third Lrr Domain Of Human Slit2
pdb|2V70|C Chain C, Third Lrr Domain Of Human Slit2
pdb|2V70|D Chain D, Third Lrr Domain Of Human Slit2
Length = 220
Score = 29.3 bits (64), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 44/105 (41%), Gaps = 3/105 (2%)
Query: 32 DVMALNSLYISLNFPPLEKWLSFGGDPCGDSWQGVFCVFSNVTEIRLTGMNLGGVLADTL 91
+ L + I P L K ++F + D +G F S V EI LT L V
Sbjct: 43 EFTVLEATGIFKKLPQLRK-INFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMF 101
Query: 92 GDLESVINIDLSNNHIG--GSIPSNLPVTVRNFSLSGNQLTGSIP 134
LES+ + L +N I G+ +VR SL NQ+T P
Sbjct: 102 KGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAP 146
>pdb|3T6Q|A Chain A, Crystal Structure Of Mouse Rp105MD-1 Complex
pdb|3T6Q|B Chain B, Crystal Structure Of Mouse Rp105MD-1 Complex
Length = 606
Score = 28.9 bits (63), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 159 DAFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKL 201
+ FH F+GL DL+A +L+ +LP LS+L L L NK
Sbjct: 272 NTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKF 313
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 28.9 bits (63), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 13/90 (14%)
Query: 567 VHGNFKSSNILLDEKLIVRVSDCG----------LAPLLFSGSTNELSEGLLTAHGSGAP 616
VH + K NILLD +R++D G + L+ G+ + LS +L A G G
Sbjct: 184 VHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGP- 242
Query: 617 EFESGSYSCQSDVYSLGVVMLELLTGRKPY 646
+GSY + D ++LGV E+ G+ P+
Sbjct: 243 --GTGSYGPECDWWALGVFAYEMFYGQTPF 270
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.136 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,117,640
Number of Sequences: 62578
Number of extensions: 801354
Number of successful extensions: 3872
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 311
Number of HSP's successfully gapped in prelim test: 689
Number of HSP's that attempted gapping in prelim test: 2145
Number of HSP's gapped (non-prelim): 1162
length of query: 720
length of database: 14,973,337
effective HSP length: 106
effective length of query: 614
effective length of database: 8,340,069
effective search space: 5120802366
effective search space used: 5120802366
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)